Query psy16052
Match_columns 476
No_of_seqs 409 out of 2690
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 19:39:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16052.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16052hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qbu_A Putative uncharacterize 100.0 2.7E-39 9.2E-44 325.4 15.8 241 192-458 74-325 (326)
2 3s6o_A Polysaccharide deacetyl 100.0 9.4E-38 3.2E-42 313.1 13.3 232 180-458 75-312 (321)
3 3rxz_A Polysaccharide deacetyl 100.0 1.1E-35 3.9E-40 295.7 21.6 221 192-455 62-284 (300)
4 3cl6_A PUUE allantoinase; URIC 100.0 1.5E-33 5.2E-38 281.3 12.9 224 179-452 69-298 (308)
5 2cc0_A Acetyl-xylan esterase; 99.9 7E-24 2.4E-28 197.6 15.1 182 178-449 4-187 (195)
6 1ny1_A Probable polysaccharide 99.9 4.6E-23 1.6E-27 198.2 18.1 187 178-449 42-231 (240)
7 2y8u_A Chitin deacetylase; hyd 99.9 6.1E-23 2.1E-27 196.0 18.6 117 177-309 31-149 (230)
8 2iw0_A Chitin deacetylase; hyd 99.9 6.7E-23 2.3E-27 198.7 18.5 117 177-309 40-163 (254)
9 2w3z_A Putative deacetylase; P 99.9 4.6E-23 1.6E-27 205.2 16.4 198 175-444 103-310 (311)
10 2vyo_A ECU11_0510, chitooligos 99.9 2.7E-23 9.2E-28 201.5 14.0 191 177-454 24-223 (254)
11 2c71_A Glycoside hydrolase, fa 99.9 1.5E-22 5E-27 191.7 15.9 186 178-451 4-192 (216)
12 2j13_A Polysaccharide deacetyl 99.9 1.6E-22 5.3E-27 195.2 16.0 118 177-309 53-173 (247)
13 2c1i_A Peptidoglycan glcnac de 99.9 2.1E-21 7.2E-26 200.6 14.3 183 178-451 235-419 (431)
14 3hft_A WBMS, polysaccharide de 99.8 8.8E-21 3E-25 177.3 6.4 141 179-358 37-179 (257)
15 3vus_A Poly-beta-1,6-N-acetyl- 99.7 4.7E-17 1.6E-21 158.7 11.1 125 178-314 65-234 (268)
16 4f9d_A Poly-beta-1,6-N-acetyl- 99.5 5E-15 1.7E-19 158.5 8.8 125 178-314 69-238 (618)
17 4hd5_A Polysaccharide deacetyl 99.5 4E-14 1.4E-18 141.5 10.8 120 178-312 197-323 (360)
18 2fyj_A Low-density lipoprotein 99.4 8.3E-14 2.8E-18 110.5 6.0 73 56-138 7-81 (82)
19 2fcw_B LDL receptor, low-densi 99.4 7.4E-14 2.5E-18 110.1 2.1 73 56-138 5-79 (80)
20 1n7d_A LDL receptor, low-densi 99.3 2.3E-12 8E-17 141.8 11.5 139 11-161 29-195 (699)
21 1n7d_A LDL receptor, low-densi 99.3 3.1E-12 1.1E-16 140.8 9.7 97 56-162 49-147 (699)
22 3m0c_C LDL receptor, low-densi 99.2 2.4E-12 8.1E-17 143.1 0.0 108 45-162 43-165 (791)
23 3m0c_C LDL receptor, low-densi 99.2 3E-12 1E-16 142.3 0.0 139 11-161 47-213 (791)
24 2fyj_A Low-density lipoprotein 99.1 3.8E-11 1.3E-15 95.2 4.6 63 101-163 3-67 (82)
25 2fcw_B LDL receptor, low-densi 99.1 1.1E-11 3.6E-16 97.8 0.7 62 102-163 2-63 (80)
26 1ajj_A LR5, low-density lipopr 99.0 1.3E-10 4.6E-15 77.5 3.1 36 103-138 2-37 (37)
27 2m0p_A Low-density lipoprotein 99.0 8.8E-11 3E-15 83.8 1.6 40 101-140 5-44 (52)
28 2jm4_A Relaxin receptor 1; LDL 99.0 3E-10 1E-14 78.4 4.0 38 101-138 5-43 (43)
29 1d2l_A Lipoprotein receptor re 99.0 2.3E-10 7.8E-15 79.6 3.3 38 101-138 4-41 (45)
30 3a7q_B Low-density lipoprotein 98.9 3.5E-10 1.2E-14 78.4 3.1 38 101-138 6-43 (44)
31 1cr8_A Protein (LOW density li 98.9 6E-10 2E-14 76.4 4.2 37 102-138 3-40 (42)
32 3dpr_E LDL-receptor class A 3; 98.9 9.4E-10 3.2E-14 74.2 3.7 36 103-138 1-38 (39)
33 2gtl_O Extracellular hemoglobi 98.9 1.7E-10 6E-15 106.7 -0.9 64 78-149 38-103 (215)
34 1k7b_A Subgroup A ROUS sarcoma 98.8 9.9E-10 3.4E-14 77.3 2.8 38 101-138 5-47 (47)
35 1j8e_A Low-density lipoprotein 98.8 9.3E-10 3.2E-14 76.3 1.8 37 101-137 3-39 (44)
36 2knx_A Prolow-density lipoprot 98.8 1.5E-09 5.3E-14 77.1 2.9 38 101-138 5-43 (50)
37 2i1p_A Low-density lipoprotein 98.8 1.3E-09 4.3E-14 77.1 1.9 38 102-139 6-44 (48)
38 1jrf_A TVA LDL-A module, subgr 98.7 2.7E-09 9.1E-14 75.1 2.1 38 101-138 3-45 (47)
39 2kny_A LRP-1, linker, APO-E; l 98.6 5.2E-09 1.8E-13 82.1 1.3 37 101-137 7-44 (80)
40 3ojy_B Complement component C8 98.6 9E-09 3.1E-13 109.3 1.4 102 80-213 43-148 (537)
41 3ojy_A Complement component C8 98.6 6E-09 2.1E-13 110.8 -0.2 107 80-214 41-150 (554)
42 2xrc_A Human complement factor 98.6 5.1E-08 1.8E-12 104.5 6.6 83 45-139 190-277 (565)
43 2xrc_A Human complement factor 98.4 1.3E-07 4.4E-12 101.4 4.4 96 49-163 166-262 (565)
44 2gtl_N Extracellular hemoglobi 98.3 1.2E-07 4.1E-12 87.0 1.6 40 101-140 51-94 (220)
45 2gtl_M Hemoglobin linker chain 98.3 1.5E-07 5.1E-12 87.1 2.0 40 101-140 52-95 (217)
46 1dqc_A Tachycitin; disulfide-r 98.2 6.7E-07 2.3E-11 69.1 3.1 58 23-88 9-66 (74)
47 3t5o_A Complement component C6 97.9 1.1E-06 3.8E-11 99.1 -0.1 73 102-203 118-190 (913)
48 1k1x_A 4-alpha-glucanotransfer 97.6 0.00043 1.5E-08 75.0 13.2 100 195-310 32-142 (659)
49 2kny_A LRP-1, linker, APO-E; l 97.3 8.3E-05 2.8E-09 58.1 2.1 68 44-124 3-76 (80)
50 1wb0_A Chitinase 1, chitotrios 96.7 0.00026 8.7E-09 73.5 0.0 50 23-77 396-445 (445)
51 2b5d_X Alpha-amylase; (beta/al 96.7 0.078 2.7E-06 55.8 18.9 79 227-311 126-205 (528)
52 1ajj_A LR5, low-density lipopr 96.2 0.0021 7.3E-08 42.2 2.2 33 56-92 4-36 (37)
53 2gtl_O Extracellular hemoglobi 96.2 0.002 6.7E-08 59.5 2.4 71 41-138 48-120 (215)
54 2i1p_A Low-density lipoprotein 96.0 0.0026 8.8E-08 44.4 2.0 35 56-94 9-44 (48)
55 1cr8_A Protein (LOW density li 95.9 0.0048 1.6E-07 41.7 2.9 34 56-93 6-40 (42)
56 3a7q_B Low-density lipoprotein 95.6 0.0053 1.8E-07 41.9 2.0 34 56-93 10-43 (44)
57 2jm4_A Relaxin receptor 1; LDL 95.6 0.0053 1.8E-07 41.7 2.0 33 56-92 9-42 (43)
58 2m0p_A Low-density lipoprotein 95.5 0.0042 1.4E-07 44.0 1.4 35 56-94 9-43 (52)
59 1d2l_A Lipoprotein receptor re 95.4 0.0068 2.3E-07 41.6 2.1 34 56-93 8-41 (45)
60 4dwe_A Uncharacterized protein 95.2 1.6 5.5E-05 43.5 19.0 174 225-451 177-355 (480)
61 1k7b_A Subgroup A ROUS sarcoma 95.2 0.0095 3.2E-07 41.2 2.4 33 56-92 9-46 (47)
62 2nly_A BH1492 protein, diverge 95.1 0.74 2.5E-05 43.3 15.8 206 180-449 5-226 (245)
63 3dpr_E LDL-receptor class A 3; 95.0 0.013 4.6E-07 38.8 2.6 34 56-93 3-38 (39)
64 1j8e_A Low-density lipoprotein 94.9 0.011 3.8E-07 40.3 2.1 34 56-93 7-40 (44)
65 2knx_A Prolow-density lipoprot 94.6 0.016 5.5E-07 40.7 2.2 34 56-93 9-43 (50)
66 2gtl_N Extracellular hemoglobi 94.2 0.022 7.5E-07 52.3 2.7 53 56-118 55-114 (220)
67 1jrf_A TVA LDL-A module, subgr 94.2 0.017 5.8E-07 39.9 1.5 34 56-93 7-45 (47)
68 2qv5_A AGR_C_5032P, uncharacte 93.9 3.4 0.00011 39.2 17.6 204 180-449 31-249 (261)
69 3n98_A Alpha-amylase, GH57 fam 92.2 0.26 8.9E-06 51.8 7.5 75 227-309 125-216 (562)
70 3p0b_A TT1467 protein; glycosi 92.0 0.29 1E-05 51.2 7.6 75 227-309 146-239 (540)
71 3ojy_B Complement component C8 90.7 0.24 8.1E-06 52.3 5.5 46 57-117 69-115 (537)
72 2gtl_M Hemoglobin linker chain 89.8 0.11 3.9E-06 47.8 1.8 34 56-93 56-93 (217)
73 3ojy_A Complement component C8 86.9 0.64 2.2E-05 49.1 5.5 43 44-94 59-102 (554)
74 3t5o_A Complement component C6 45.0 14 0.00049 41.3 4.1 34 57-94 121-154 (913)
75 1o7d_A Lysosomal alpha-mannosi 44.3 96 0.0033 29.6 9.3 82 226-314 87-171 (298)
76 1v6t_A Hypothetical UPF0271 pr 42.3 2.1E+02 0.0073 26.5 13.8 61 227-288 47-110 (255)
77 2x5e_A UPF0271 protein PA4511; 38.4 2E+02 0.0067 26.7 9.9 101 176-288 4-116 (252)
78 2dfa_A Hypothetical UPF0271 pr 37.2 1.7E+02 0.0057 27.2 9.3 60 227-287 47-109 (250)
79 1xg8_A Hypothetical protein SA 37.0 69 0.0024 25.6 5.6 54 376-434 20-75 (111)
80 1xw8_A UPF0271 protein YBGL; N 31.8 1.8E+02 0.0063 26.9 8.6 111 194-316 16-162 (252)
81 3evi_A Phosducin-like protein 31.3 51 0.0017 26.6 4.4 37 404-444 24-60 (118)
82 2kus_A SM-AMP-1.1A; plant anti 22.8 26 0.00088 22.3 0.7 25 102-126 6-30 (35)
83 2wyh_A Alpha-mannosidase; hydr 20.7 2.3E+02 0.0079 31.4 8.5 78 226-314 91-171 (923)
No 1
>3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori}
Probab=100.00 E-value=2.7e-39 Score=325.38 Aligned_cols=241 Identities=15% Similarity=0.222 Sum_probs=193.6
Q ss_pred ccHHHHHHHHhccCCCCCCCCceEEEEecccCC--ChHHHHHHHHcCCeeeeCCCCCCCCccccCCCCHHHHHHHHHHHH
Q psy16052 192 NNIALYKEMFNGKRKNPNGCDIKATFFVSHKYT--NYSAVQELHRKGHEVAVHSITHNDDENFWSNATVDDWAKEMAGMR 269 (476)
Q Consensus 192 ~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~~--~~~~v~~l~~~GHEIg~Hs~~H~~~~~~~~~~s~e~~~~ei~~~~ 269 (476)
.++++++++|++ +++++||||++... +++++++|+++|||||+||++|... ..++.+++++||.+++
T Consensus 74 ~~~~rlL~lL~~-------~~v~aTfFv~g~~~~~~p~~v~~i~~~GhEIg~H~~~H~~~----~~~s~~~~~~ei~~~~ 142 (326)
T 3qbu_A 74 VGIPRLLKLFKK-------YHLPATWFVPGHSIETFPEQMKMIVDAGHEVGAHGYSHENP----IAMSTKQEEDVLLKSV 142 (326)
T ss_dssp THHHHHHHHHHH-------TTCCCEEECCHHHHHHCHHHHHHHHTTTCEEEBCCSSCCCG----GGSCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHH-------cCCCEEEEEEhHHhhhCHHHHHHHHHcCCEEEeCCCCCcCh----hhCCHHHHHHHHHHHH
Confidence 456789999999 99999999998652 4599999999999999999999875 5689999999999999
Q ss_pred HHHHHhhcccCCcccEEecCCcccCchHHHHHHHHcCCeEeeecccCCCC-CCCCCcc------ccccCCCCcCCCCcCC
Q psy16052 270 IIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLSN-PPLWPYT------MYFRMPHRCHGNLQHC 342 (476)
Q Consensus 270 ~~l~~~~~i~g~~~~gfR~P~l~~~~~~~~~~l~~~G~~Ydss~~~~~~~-~p~~pyt------l~~~~~~~c~~~~~~c 342 (476)
++|+ .++|..++|||+|+++.+.+ ++++|+++||.||||+..+ + .|+|+++ +++..+..|. ..++
T Consensus 143 ~~l~---~~~G~~p~~fr~P~g~~~~~-~~~~l~e~G~~ydss~~~~--D~~Py~~~~~~~~~~~d~~~~~~~w--~~P~ 214 (326)
T 3qbu_A 143 ELIK---DLTGKAPTGYVAPWWEFSNI-TNELLLKHGFKYDHSLMHN--DFTPYYVRVGDSWSKIDYSLEAKDW--MKPL 214 (326)
T ss_dssp HHHH---HHHSSCCCEECCGGGCCSSH-HHHHHHTTTCCEECCCCSC--SSSCEEEEECCBCCCCCTTSCGGGT--CCCC
T ss_pred HHHH---HHHCCCCcEEECCCCCCCHH-HHHHHHHcCCEEEeeccCC--CCCCeeeecCCccccccccccchhh--cccc
Confidence 9999 47889999999999999976 9999999999999999864 3 6777666 3444433332 1234
Q ss_pred CCC-CCCeEEEeccccccCCCCCCCCCCCCCcccCCCCCCCChHHHHHHHHHHHHHHhcc-CCcceEEeecchhhcCChH
Q psy16052 343 PTR-SHAVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQ-NRAPLGLYFHAAWLKNNPE 420 (476)
Q Consensus 343 p~~-~~~lweiP~~~~~~~~~p~~~~~~~g~~~~d~~~~~~~~~~~~~~l~~~f~~~y~~-~r~p~~i~~H~~w~~~~p~ 420 (476)
+.. ..++||||+++..+ |.|.|+.... + .+.....++++++++|+++|+++|++ ++++++|++|+. +.|+|.
T Consensus 215 ~~g~~~~l~eiP~~~~~~-D~p~~~f~~~-~---~~~~g~~~~~~~~~~l~~~Fd~~y~~~~~~~~~i~lH~~-~~g~p~ 288 (326)
T 3qbu_A 215 IRGVETNLVEIPANWYLD-DLPPMMFIKK-S---PNSFGFVSPRDIGQMWIDQFDWVYREMDYAVFSMTIHPD-VSARPQ 288 (326)
T ss_dssp BCCEEEEEEECCCCGGGB-SHHHHCCCTT-C---TTCCCCSCHHHHHHHHHHHHHHHHHHCSEEEEEEEECHH-HHTSHH
T ss_pred cCCCCCCeEEEcCccccC-cchhhhcccc-c---cCCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEECcc-ccCCHH
Confidence 333 35699999996332 2343332110 0 01112478999999999999999985 588999999954 678999
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeHHHHHHHhhCCcchh
Q psy16052 421 FLDAFLYWVDEIIERHKDVYFVTMTQVIQWIQNPRTIT 458 (476)
Q Consensus 421 ~~~al~~fl~~i~~~~~dV~fvT~~qi~~w~~~p~~~~ 458 (476)
++++|++||+||++ +++|||||++|||+||+++.|.+
T Consensus 289 r~~~le~fl~~i~~-~~~Vw~~t~~eia~~~~~~~p~~ 325 (326)
T 3qbu_A 289 VLLMHEKIIEHINK-HEGVRWVTFNEIADDFLKRNPRK 325 (326)
T ss_dssp HHHHHHHHHHHHTT-STTEEECCHHHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHh-CCCEEEEcHHHHHHHHHhhCCCC
Confidence 99999999999988 99999999999999999988876
No 2
>3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6
Probab=100.00 E-value=9.4e-38 Score=313.08 Aligned_cols=232 Identities=18% Similarity=0.219 Sum_probs=190.4
Q ss_pred eEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEEEecccC--CChHHHHHHHHcCCeeeeCCCCCCCCccccCCCC
Q psy16052 180 MITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKY--TNYSAVQELHRKGHEVAVHSITHNDDENFWSNAT 257 (476)
Q Consensus 180 ~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~--~~~~~v~~l~~~GHEIg~Hs~~H~~~~~~~~~~s 257 (476)
.+.+|||||+.. ++++++++|++ +++++||||++.. .++++|++++++|||||+||++|... ..++
T Consensus 75 ~~~s~fddG~~~-~~~rll~lL~~-------~~v~aTfFv~g~~~~~~p~~v~~i~~~GhEIg~H~~~H~~~----~~ls 142 (321)
T 3s6o_A 75 SMESIYEYGSRA-GVWRILREFDK-------RGLPLTVFGVGMAIERHPELARAFVELGHEIACHGWRWIHY----QDMT 142 (321)
T ss_dssp HHHHHHHHHHHT-HHHHHHHHHHH-------HTCCCEEEECHHHHHHCHHHHHHHHHTTCEEEECCSSCSCC----TTCC
T ss_pred cceeEeccCcHH-hHHHHHHHHHH-------cCCCEEEEEEHHHhhhCHHHHHHHHHcCCEEeeCCcccccc----ccCC
Confidence 578899999975 56899999999 9999999999864 24599999999999999999999875 5799
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcccCchHHHHHHHHcC-CeEeeecccCCCCCCCCCccccccCCCCcC
Q psy16052 258 VDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQA-FLYDSTITAPLSNPPLWPYTMYFRMPHRCH 336 (476)
Q Consensus 258 ~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~~~~~~~~~~l~~~G-~~Ydss~~~~~~~~p~~pytl~~~~~~~c~ 336 (476)
.+++++||.+++++|+ .++|..++||| +++.+.+ ++++|+++| |.||||+..+ +.|+|+++.+..
T Consensus 143 ~~~~~~ei~~~~~~l~---~~~G~~p~g~r--~g~~s~~-t~~ll~e~G~f~Ydss~~~d--d~Py~~~~~~~~------ 208 (321)
T 3s6o_A 143 PEREAEHMRLGMEAIE---RVTGVRPLGWY--TGRDSPN-THRLVAEYGGFLYDSDHYGD--DLPFWMDVEVSG------ 208 (321)
T ss_dssp HHHHHHHHHHHHHHHH---HHHSCCCCEEC--CSSCCTT-HHHHHHHHCCCSEECCCCSC--SSCEEEEEECTT------
T ss_pred HHHHHHHHHHHHHHHH---HHhCCCcccEE--CCCCCHH-HHHHHHHcCCeEEEEeccCC--CCCcceeccCcC------
Confidence 9999999999999999 57899999999 4566765 999999999 9999999865 467777664410
Q ss_pred CCCcCCCCCCCCeEEEeccccccCCCCCCCCCCCCCcccCCCCCCCChHHHHHHHHHHHHHHhccC-Ccc--eEEeecch
Q psy16052 337 GNLQHCPTRSHAVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQN-RAP--LGLYFHAA 413 (476)
Q Consensus 337 ~~~~~cp~~~~~lweiP~~~~~~~~~p~~~~~~~g~~~~d~~~~~~~~~~~~~~l~~~f~~~y~~~-r~p--~~i~~H~~ 413 (476)
....++|+||+++..++ .+ |. + .....++++++++|+++|+++|+++ ++| ++|++| +
T Consensus 209 -------g~~~~l~~iP~t~~~~D-~~-~~-------~---~~g~~~~~~~~~~l~~~Fd~~y~eg~~ap~~~~i~lH-~ 268 (321)
T 3s6o_A 209 -------GASVPQLIVPYTLDAND-MR-FA-------T---PQGFNTADHFFHYLRDAFDVLYEEGDEAPKMMSIGMH-C 268 (321)
T ss_dssp -------SCEEEEEECCCCSSSBG-GG-GS-------S---SSCCCSHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEE-T
T ss_pred -------CCCCCEEEEeEeeeeCC-ee-ee-------c---CCCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEeC-h
Confidence 12236999998763321 11 11 0 0123578999999999999999755 665 899999 4
Q ss_pred hhcCChHHHHHHHHHHHHHHhhCCCEEEEeHHHHHHHhhCCcchh
Q psy16052 414 WLKNNPEFLDAFLYWVDEIIERHKDVYFVTMTQVIQWIQNPRTIT 458 (476)
Q Consensus 414 w~~~~p~~~~al~~fl~~i~~~~~dV~fvT~~qi~~w~~~p~~~~ 458 (476)
++.++|.++.+|++||+||++ +++|||||++|||+||+++.|..
T Consensus 269 ~~~g~p~r~~~le~fL~~i~~-~~~Vw~~t~~eia~~~~~~~p~~ 312 (321)
T 3s6o_A 269 RLLGRPGRFRALQRFLDHIER-HDRVWVARRVEIARHWREHHPYR 312 (321)
T ss_dssp TTTTSHHHHHHHHHHHHHHHT-CSSEEECCHHHHHHHHHHHSCC-
T ss_pred HHcCCHHHHHHHHHHHHHHHh-CCCEEEEcHHHHHHHHHhhCCCC
Confidence 577899999999999999998 99999999999999997766654
No 3
>3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.1e-35 Score=295.69 Aligned_cols=221 Identities=20% Similarity=0.261 Sum_probs=182.4
Q ss_pred ccHHHHHHHHhccCCCCCCCCceEEEEecccC--CChHHHHHHHHcCCeeeeCCCCCCCCccccCCCCHHHHHHHHHHHH
Q psy16052 192 NNIALYKEMFNGKRKNPNGCDIKATFFVSHKY--TNYSAVQELHRKGHEVAVHSITHNDDENFWSNATVDDWAKEMAGMR 269 (476)
Q Consensus 192 ~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~--~~~~~v~~l~~~GHEIg~Hs~~H~~~~~~~~~~s~e~~~~ei~~~~ 269 (476)
.++++++++|++ +++++||||++.+ .+.+++++++++|||||+||++|... ..++.+++++||.+++
T Consensus 62 ~~~~rll~ll~~-------~~v~aTfFv~g~~~~~~p~~v~~~~~~GhEIg~H~~~H~~~----~~~s~~~~~~ei~~~~ 130 (300)
T 3rxz_A 62 VGVPRLLGILDE-------FNVPGTFFVPGYTAHRHPEPIRSIARAGHEIAHHGYLHESL----VGADEDTERKILTRGI 130 (300)
T ss_dssp THHHHHHHHHHH-------TTCCEEEEECHHHHHHSHHHHHHHHHTTCEEEECCSSCCCC----TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-------cCCCEEEEEEHHHHhhCHHHHHHHHHcCCEEEecCCCCccc----ccCCHHHHHHHHHHHH
Confidence 456789999999 9999999999864 23499999999999999999999985 5689999999999999
Q ss_pred HHHHHhhcccCCcccEEecCCcccCchHHHHHHHHcCCeEeeecccCCCCCCCCCccccccCCCCcCCCCcCCCCCCCCe
Q psy16052 270 IIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPHRCHGNLQHCPTRSHAV 349 (476)
Q Consensus 270 ~~l~~~~~i~g~~~~gfR~P~l~~~~~~~~~~l~~~G~~Ydss~~~~~~~~p~~pytl~~~~~~~c~~~~~~cp~~~~~l 349 (476)
++|+ .++|..++|||+|+++.+.+ ++++|+++||.||||+..+ .+||.+.. .+ .++
T Consensus 131 ~~l~---~~~G~~p~~fr~P~g~~~~~-~~~~l~e~G~~ydss~~~~-----~~Py~~~~--------------~~-~~l 186 (300)
T 3rxz_A 131 EALE---EVAGVHPVGYRAPMWEMNWH-TPKLLAEFGFLYDSTLMDS-----DHPYELAV--------------GD-GSL 186 (300)
T ss_dssp HHHH---HHHSCCCCEECCGGGCCCTT-HHHHHHHTTCSEECCCCSC-----SSCEEBCC--------------TT-SCC
T ss_pred HHHH---HHhCCCCcEEECCCCCCCHH-HHHHHHHcCCEEEeeccCC-----CCceEeec--------------CC-CCe
Confidence 9999 47889999999999999986 9999999999999999864 34554331 01 359
Q ss_pred EEEeccccccCCCCCCCCCCCCCcccCCCCCCCChHHHHHHHHHHHHHHhccCCcceEEeecchhhcCChHHHHHHHHHH
Q psy16052 350 WEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAWLKNNPEFLDAFLYWV 429 (476)
Q Consensus 350 weiP~~~~~~~~~p~~~~~~~g~~~~d~~~~~~~~~~~~~~l~~~f~~~y~~~r~p~~i~~H~~w~~~~p~~~~al~~fl 429 (476)
|+||+++..+ |.+.|... | +..++....++++++++|+++|+++|++ ++|++|++| +++.|+|.++++|++||
T Consensus 187 ~~iP~~~~~~-D~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~fd~~~~~-g~~~~i~~H-~~~~g~p~~~~~l~~~l 259 (300)
T 3rxz_A 187 VELPVSWALD-DWQQYCFV-P---DFSGTGLIETPAKAIELWRAELNAMRDI-GGAWVLTNH-PFLSGRPGRAAALREFI 259 (300)
T ss_dssp EECCCCGGGB-SHHHHCCB-T---TTBCSSCCCCHHHHHHHHHHHHHHHHHH-TCEEEEEEC-HHHHTSHHHHHHHHHHH
T ss_pred EEEeeeeecC-CcHhhhcc-c---ccccCCCCCCHHHHHHHHHHHHHHHHHc-CCeEEEEEC-hhhcCCHHHHHHHHHHH
Confidence 9999986332 12222111 1 1233334578999999999999999987 689999999 67888999999999999
Q ss_pred HHHHhhCCCEEEEeHHHHHHHhhCCc
Q psy16052 430 DEIIERHKDVYFVTMTQVIQWIQNPR 455 (476)
Q Consensus 430 ~~i~~~~~dV~fvT~~qi~~w~~~p~ 455 (476)
+|+++ +++|||+|++||++||+++.
T Consensus 260 ~~~~~-~~~V~~~t~~eia~~~~~~~ 284 (300)
T 3rxz_A 260 AEVCA-MDDVWVAGMSQIAEHVRAQK 284 (300)
T ss_dssp HHHHT-CTTEEECCHHHHHHHHHHTC
T ss_pred HHHHh-CCCEEEEcHHHHHHHHHhhc
Confidence 99998 99999999999999996654
No 4
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A
Probab=100.00 E-value=1.5e-33 Score=281.34 Aligned_cols=224 Identities=19% Similarity=0.310 Sum_probs=182.7
Q ss_pred CeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEEEecccC--CChHHHHHHHHcCCeeeeCCCCCCCCccccCCC
Q psy16052 179 QMITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKY--TNYSAVQELHRKGHEVAVHSITHNDDENFWSNA 256 (476)
Q Consensus 179 q~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~--~~~~~v~~l~~~GHEIg~Hs~~H~~~~~~~~~~ 256 (476)
..|.||||||+.. ++++++++|++ +++++||||++.. .+++++++|+++|||||+|||+|... ..+
T Consensus 69 ~~~~ltfDdG~~~-~~~~ll~iL~~-------~~v~aTfFv~g~~~~~~p~~v~~i~~~GheIg~Ht~~H~~~----~~~ 136 (308)
T 3cl6_A 69 MSMESLYEYGSRA-GVWRILKLFKA-------FDIPLTIFAVAMAAQRHPDVIRAMVAAGHEICSHGYRWIDY----QYM 136 (308)
T ss_dssp HHHHHHHHHHHHT-HHHHHHHHHHH-------TTCCCEEEECHHHHHHCHHHHHHHHHTTCEEEECCSSSSCC----TTC
T ss_pred cceeEEEecCchh-hHHHHHHHHHH-------cCCCEEEEeEHHHHHHCHHHHHHHHHcCCEEEeCCCCCccc----ccC
Confidence 3688999999975 57899999999 9999999999864 34599999999999999999999985 468
Q ss_pred CHHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcccCchHHHHHHHHcC-CeEeeecccCCCCCCCCCccccccCCCCc
Q psy16052 257 TVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQA-FLYDSTITAPLSNPPLWPYTMYFRMPHRC 335 (476)
Q Consensus 257 s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~~~~~~~~~~l~~~G-~~Ydss~~~~~~~~p~~pytl~~~~~~~c 335 (476)
+.+++++||.+++++|+ .++|..++|||+| +.+.+ ++++|+++| |.|++|+..+ +.|+|+.+.
T Consensus 137 s~~~~~~ei~~~~~~l~---~~~G~~p~g~r~~--~~~~~-~~~~l~~~G~~~y~ss~~~~--d~Py~~~~~-------- 200 (308)
T 3cl6_A 137 DEAQEREHMLEAIRILT---ELTGERPLGWYTG--RTGPN-TRRLVMEEGGFLYDCDTYDD--DLPYWEPNN-------- 200 (308)
T ss_dssp CHHHHHHHHHHHHHHHH---HHHSSCCSEECCS--SCCTT-HHHHHHHHCCCSEECCCCCC--SSCEECSCC--------
T ss_pred CHHHHHHHHHHHHHHHH---HHhCCCcceEECC--CCCHH-HHHHHHHCCCceEEeccCCC--CCceeeecC--------
Confidence 99999999999999999 5789999999987 45555 899999999 9999999864 456665420
Q ss_pred CCCCcCCCCCCCCeEEEeccccccCCCCCCCCCCCCCcccCCCCCCCChHHHHHHHHHHHHHHhccCC-cc--eEEeecc
Q psy16052 336 HGNLQHCPTRSHAVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNR-AP--LGLYFHA 412 (476)
Q Consensus 336 ~~~~~~cp~~~~~lweiP~~~~~~~~~p~~~~~~~g~~~~d~~~~~~~~~~~~~~l~~~f~~~y~~~r-~p--~~i~~H~ 412 (476)
....++++||+++..++ . .+. ......++++++++++++|+++|+.++ +| ++|.+|+
T Consensus 201 --------~~~~~~~~iP~~~~~~D-~-~~~----------~~~~~~~~~~~~~~~~~~~d~~~~~g~~~p~~~~Il~H~ 260 (308)
T 3cl6_A 201 --------PTGKPHLVIPYTLDTND-M-RFT----------QVQGFNKGDDFFEYLKDAFDVLYAEGAEAPKMLSIGLHC 260 (308)
T ss_dssp --------TTCSCCEECCCCSSSBG-G-GGG----------SSSCCSSHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEEH
T ss_pred --------CCCCCEEEEccccccCc-e-eee----------ccCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeCc
Confidence 12346999999863221 1 010 001235789999999999999998665 56 6889995
Q ss_pred hhhcCChHHHHHHHHHHHHHHhhCCCEEEEeHHHHHHHhh
Q psy16052 413 AWLKNNPEFLDAFLYWVDEIIERHKDVYFVTMTQVIQWIQ 452 (476)
Q Consensus 413 ~w~~~~p~~~~al~~fl~~i~~~~~dV~fvT~~qi~~w~~ 452 (476)
. +.+++.++++|++||+|+++ +++|||+|++||++|++
T Consensus 261 ~-~~g~~~~~~aL~~~l~~l~~-~g~v~~~T~~eia~~~~ 298 (308)
T 3cl6_A 261 R-LIGRPARLAALQRFIEYAKS-HEQVWFTRRVDIARHWH 298 (308)
T ss_dssp H-HHTSHHHHHHHHHHHHHHHT-SSSEEECCHHHHHHHHH
T ss_pred c-ccCCHHHHHHHHHHHHHHHh-CCCEEEecHHHHHHHHH
Confidence 4 67889999999999999998 88999999999999553
No 5
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=99.91 E-value=7e-24 Score=197.57 Aligned_cols=182 Identities=16% Similarity=0.168 Sum_probs=142.5
Q ss_pred CCeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEEEecccCC--ChHHHHHHHHcCCeeeeCCCCCCCCccccCC
Q psy16052 178 PQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKYT--NYSAVQELHRKGHEVAVHSITHNDDENFWSN 255 (476)
Q Consensus 178 Pq~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~~--~~~~v~~l~~~GHEIg~Hs~~H~~~~~~~~~ 255 (476)
++.|+||||||+... ++.++++|++ ++++|||||++.+. +++++++|+++|||||+|||+|..+ ..
T Consensus 4 ~~~V~LTFDDG~~~~-~~~il~iL~~-------~~v~aTfFv~g~~~~~~~~~~~~~~~~GheIg~Ht~~H~~l----~~ 71 (195)
T 2cc0_A 4 NGYVGLTFDDGPSGS-TQSLLNALRQ-------NGLRATMFNQGQYAAQNPSLVRAQVDAGMWVANHSYTHPHM----TQ 71 (195)
T ss_dssp SEEEEEEEESCCSTT-HHHHHHHHHH-------TTCCCEEEECHHHHHHCHHHHHHHHHTTCEEEECCSSCCCG----GG
T ss_pred CCEEEEEEcCCCchh-HHHHHHHHHH-------cCCCEEEEecChhhhhCHHHHHHHHHCCCEEEcCCCCcccc----cc
Confidence 679999999999877 7899999999 99999999998653 5699999999999999999999985 56
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcccCchHHHHHHHHcCCeEeeecccCCCCCCCCCccccccCCCCc
Q psy16052 256 ATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPHRC 335 (476)
Q Consensus 256 ~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~~~~~~~~~~l~~~G~~Ydss~~~~~~~~p~~pytl~~~~~~~c 335 (476)
++.+++++||.+++++|+ .++|..+++||+||+..+.. ++++++++||.+- .|. .+.
T Consensus 72 ls~~~~~~ei~~~~~~l~---~~~G~~~~~fr~P~G~~~~~-~~~~~~~~G~~~v-----------~w~--~d~------ 128 (195)
T 2cc0_A 72 LGQAQMDSEISRTQQAIA---GAGGGTPKLFRPPYGETNAT-LRSVEAKYGLTEV-----------IWD--VDS------ 128 (195)
T ss_dssp SCHHHHHHHHHHHHHHHH---HTTSCCCSEECCGGGCCCHH-HHHHHHHTTCEEC-----------CCS--EEC------
T ss_pred CCHHHHHHHHHHHHHHHH---HHhCCCCCEEECCCCCcCHH-HHHHHHHCCCeEE-----------Eec--cCC------
Confidence 899999999999999999 58888999999999999876 8999999998531 121 110
Q ss_pred CCCCcCCCCCCCCeEEEeccccccCCCCCCCCCCCCCcccCCCCCCCChHHHHHHHHHHHHHHhccCCcceEEeecchhh
Q psy16052 336 HGNLQHCPTRSHAVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAWL 415 (476)
Q Consensus 336 ~~~~~~cp~~~~~lweiP~~~~~~~~~p~~~~~~~g~~~~d~~~~~~~~~~~~~~l~~~f~~~y~~~r~p~~i~~H~~w~ 415 (476)
..+. ..+++.+.+.+ .+. .++ -+|.+|..
T Consensus 129 -------------------~Dw~----------------------~~~~~~i~~~~----~~~--~~g--~IiL~Hd~-- 157 (195)
T 2cc0_A 129 -------------------QDWN----------------------NASTDAIVQAV----SRL--GNG--QVILMHDW-- 157 (195)
T ss_dssp -------------------CGGG----------------------TCCHHHHHHHH----HTC--CTT--CEEEEESS--
T ss_pred -------------------CccC----------------------CCCHHHHHHHH----hCc--CcC--eEEEECCC--
Confidence 0000 01345555443 221 122 47888932
Q ss_pred cCChHHHHHHHHHHHHHHhhCCCEEEEeHHHHHH
Q psy16052 416 KNNPEFLDAFLYWVDEIIERHKDVYFVTMTQVIQ 449 (476)
Q Consensus 416 ~~~p~~~~al~~fl~~i~~~~~dV~fvT~~qi~~ 449 (476)
.+...++|.++|+++++ .++.|||.+++..
T Consensus 158 --~~~t~~al~~ii~~l~~--~Gy~~v~l~~~~~ 187 (195)
T 2cc0_A 158 --PANTLAAIPRIAQTLAG--KGLCSGMISPQTG 187 (195)
T ss_dssp --CHHHHHHHHHHHHHHHH--TTEEECEECTTTS
T ss_pred --chhHHHHHHHHHHHHHH--CCCEEEEeCcccC
Confidence 34678999999999986 7999999887643
No 6
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=99.90 E-value=4.6e-23 Score=198.24 Aligned_cols=187 Identities=14% Similarity=0.209 Sum_probs=143.8
Q ss_pred CCeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEEEecccCC--ChHHHHHHHHcCCeeeeCCCCCCCCccccCC
Q psy16052 178 PQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKYT--NYSAVQELHRKGHEVAVHSITHNDDENFWSN 255 (476)
Q Consensus 178 Pq~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~~--~~~~v~~l~~~GHEIg~Hs~~H~~~~~~~~~ 255 (476)
++.|+||||||+....+++++++|++ ++++|||||++.+. +++++++|+++|||||+|||+|..+ ..
T Consensus 42 ~k~V~LTFDDG~~~~~t~~il~iL~~-------~~v~ATfFv~g~~~~~~p~~~~~~~~~GheIg~Ht~~H~~l----~~ 110 (240)
T 1ny1_A 42 EKTIYLTFDNGYENGYTPKVLDVLKK-------HRVTGTFFVTGHFVKDQPQLIKRMSDEGHIIGNHSFHHPDL----TT 110 (240)
T ss_dssp SSEEEEEEEESSCCSCHHHHHHHHHH-------TTCCCEEEECHHHHHHCHHHHHHHHHTTCEEEECCSSCCCG----GG
T ss_pred CCEEEEEEeCCCCcccHHHHHHHHHH-------cCCCEEEEEeChhhhhCHHHHHHHHHCcCChhcCCcccccc----cc
Confidence 57999999999987777889999999 99999999998653 4589999999999999999999975 56
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcccCCc-ccEEecCCcccCchHHHHHHHHcCCeEeeecccCCCCCCCCCccccccCCCC
Q psy16052 256 ATVDDWAKEMAGMRIIAEKYANLSDNS-VVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPHR 334 (476)
Q Consensus 256 ~s~e~~~~ei~~~~~~l~~~~~i~g~~-~~gfR~P~l~~~~~~~~~~l~~~G~~Ydss~~~~~~~~p~~pytl~~~~~~~ 334 (476)
++.+++++||.++.++|+ .++|.. +++||+||+..+.. ++++++++||.+-. +..+ .-.|-..
T Consensus 111 ls~~~~~~ei~~~~~~l~---~~~G~~~~~~fr~P~G~~~~~-~~~~l~~~G~~~v~-w~~d---~~Dw~~~-------- 174 (240)
T 1ny1_A 111 KTADQIQDELDSVNEEVY---KITGKQDNLYLRPPRGVFSEY-VLKETKRLGYQTVF-WSVA---FVDWKIN-------- 174 (240)
T ss_dssp SCHHHHHHHHHHHHHHHH---HHHSCCCCCEECCGGGEECHH-HHHHHHHTTCEEBC-CSBC---CSCCCGG--------
T ss_pred CCHHHHHHHHHHHHHHHH---HHhCCCCCcEEeCCCCCCCHH-HHHHHHHcCCEEEE-Cccc---ccccCCc--------
Confidence 899999999999999999 477877 99999999999876 89999999996411 0000 0011000
Q ss_pred cCCCCcCCCCCCCCeEEEeccccccCCCCCCCCCCCCCcccCCCCCCCChHHHHHHHHHHHHHHhccCCcceEEeecchh
Q psy16052 335 CHGNLQHCPTRSHAVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAW 414 (476)
Q Consensus 335 c~~~~~~cp~~~~~lweiP~~~~~~~~~p~~~~~~~g~~~~d~~~~~~~~~~~~~~l~~~f~~~y~~~r~p~~i~~H~~w 414 (476)
...+.+.+++.+... . .++ -+|.+|..
T Consensus 175 ---------------------------------------------~~~~~~~~~~~v~~~----~-~~g--~Iil~Hd~- 201 (240)
T 1ny1_A 175 ---------------------------------------------NQKGKKYAYDHMIKQ----A-HPG--AIYLLHTV- 201 (240)
T ss_dssp ---------------------------------------------GCCCHHHHHHHHHHT----C-CTT--EEEEECSC-
T ss_pred ---------------------------------------------CCCCHHHHHHHHHhC----C-CCC--eEEEEcCC-
Confidence 001234444443321 1 122 48889932
Q ss_pred hcCChHHHHHHHHHHHHHHhhCCCEEEEeHHHHHH
Q psy16052 415 LKNNPEFLDAFLYWVDEIIERHKDVYFVTMTQVIQ 449 (476)
Q Consensus 415 ~~~~p~~~~al~~fl~~i~~~~~dV~fvT~~qi~~ 449 (476)
.+...++|.++|+++++ .++.|||.+|++.
T Consensus 202 ---~~~t~~aL~~ii~~l~~--~Gy~fvtl~el~~ 231 (240)
T 1ny1_A 202 ---SRDNAEALDDAITDLKK--QGYTFKSIDDLMF 231 (240)
T ss_dssp ---STTHHHHHHHHHHHHHH--HTCEEECHHHHHH
T ss_pred ---ChhHHHHHHHHHHHHHH--CCCEEEEhHHhhc
Confidence 34578999999999986 5999999999985
No 7
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=99.90 E-value=6.1e-23 Score=196.04 Aligned_cols=117 Identities=22% Similarity=0.353 Sum_probs=105.0
Q ss_pred CCCeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEEEecccCC--ChHHHHHHHHcCCeeeeCCCCCCCCccccC
Q psy16052 177 VPQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKYT--NYSAVQELHRKGHEVAVHSITHNDDENFWS 254 (476)
Q Consensus 177 ~Pq~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~~--~~~~v~~l~~~GHEIg~Hs~~H~~~~~~~~ 254 (476)
.++.|+||||||+. ..++.++++|++ ++++|||||++.+. +++++++|+++|||||+|||+|..+ .
T Consensus 31 ~~k~VaLTFDDGp~-~~~~~il~iL~~-------~~v~ATfFv~g~~~~~~p~~~~~~~~~GheIg~Ht~~H~~l----~ 98 (230)
T 2y8u_A 31 TPNTIALTFDDGPS-EYTPQLLDLLSR-------YSARATFFVLGDAAAQNPGLLQRMRDEGHQVGAHTYDHVSL----P 98 (230)
T ss_dssp STTEEEEEEESCCC-TTHHHHHHHHHH-------TTCCCEEEECHHHHHHCHHHHHHHHHTTCEEEECCSSCCCG----G
T ss_pred CCCEEEEEecCCch-hhHHHHHHHHHH-------cCCCEEEEEecHHHhHCHHHHHHHHHCCCEEEecccCCCCc----c
Confidence 36899999999998 567899999999 99999999998653 4599999999999999999999874 5
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcccCchHHHHHHHHcCCeE
Q psy16052 255 NATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLY 309 (476)
Q Consensus 255 ~~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~~~~~~~~~~l~~~G~~Y 309 (476)
.++.+++++||.++.++|+ .++|..+.+||+||+..+.. ++++++++||.+
T Consensus 99 ~ls~~~~~~ei~~~~~~l~---~~~G~~~~~fr~P~G~~~~~-~~~~l~~~G~~~ 149 (230)
T 2y8u_A 99 SLGYDGIASQMTRLEEVIR---PALGVAPAYMRPPYLETNEL-VLQVMRDLDYRV 149 (230)
T ss_dssp GSCHHHHHHHHHHHHHHHH---HHHSSCBSEECCGGGCCCHH-HHHHHHHTTCEE
T ss_pred cCCHHHHHHHHHHHHHHHH---HHhCCCCcEEECCCCCCCHH-HHHHHHHcCCEE
Confidence 6899999999999999999 47788999999999999876 899999999964
No 8
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=99.90 E-value=6.7e-23 Score=198.69 Aligned_cols=117 Identities=20% Similarity=0.330 Sum_probs=105.1
Q ss_pred CCCeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEEEecccC---C---Ch-HHHHHHHHcCCeeeeCCCCCCCC
Q psy16052 177 VPQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKY---T---NY-SAVQELHRKGHEVAVHSITHNDD 249 (476)
Q Consensus 177 ~Pq~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~---~---~~-~~v~~l~~~GHEIg~Hs~~H~~~ 249 (476)
.++.|+||||||+. ..++.++++|++ ++++|||||++.+ . .+ +++++|+++|||||+|||+|..+
T Consensus 40 ~~k~V~LTFDDGp~-~~~~~il~iL~~-------~~vkATFFv~g~~~g~~~~~~~p~~lr~i~~~GheIg~Ht~~H~~l 111 (254)
T 2iw0_A 40 QPGLVALTYDDGPF-TFTPQLLDILKQ-------NDVRATFFVNGNNWANIEAGSNPDTIRRMRADGHLVGSHTYAHPDL 111 (254)
T ss_dssp SSSEEEEEEESCSC-TTHHHHHHHHHH-------HTCCCEEEECSBSSSBTTSTTHHHHHHHHHHTTCEEEECCSSCCCG
T ss_pred CCCEEEEEeccCch-hhHHHHHHHHHH-------cCCCEEEEEECCcccccccccCHHHHHHHHHCCCEEEeeccCCCCc
Confidence 46899999999998 566899999999 9999999999986 2 33 89999999999999999999874
Q ss_pred ccccCCCCHHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcccCchHHHHHHHHcCCeE
Q psy16052 250 ENFWSNATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLY 309 (476)
Q Consensus 250 ~~~~~~~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~~~~~~~~~~l~~~G~~Y 309 (476)
..++.+++++||.+++++|+ .++|..+++||+||+..+.. ++++++++||.+
T Consensus 112 ----~~ls~~~~~~ei~~~~~~l~---~~~G~~~~~fr~P~G~~~~~-~~~~l~~~G~~~ 163 (254)
T 2iw0_A 112 ----NTLSSADRISQMRQLEEATR---RIDGFAPKYMRAPYLSCDAG-CQGDLGGLGYHI 163 (254)
T ss_dssp ----GGSCHHHHHHHHHHHHHHHH---HHHSCEESEECCGGGCCCHH-HHHHHHHTTCEE
T ss_pred ----ccCCHHHHHHHHHHHHHHHH---HHhCCCCCEEECCCCCCCHH-HHHHHHHcCCeE
Confidence 56899999999999999999 47788999999999999886 999999999964
No 9
>2w3z_A Putative deacetylase; PGDA, glcnac DE-N-acetylase, hydrolase, divale metal cation dependent, carbohydrate esterase family 4; 1.45A {Streptococcus mutans UA159}
Probab=99.90 E-value=4.6e-23 Score=205.24 Aligned_cols=198 Identities=14% Similarity=0.121 Sum_probs=148.5
Q ss_pred CCCCCeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEEEecccCC---ChHHHHHHHHcCCeeeeCCCCCCCCcc
Q psy16052 175 KEVPQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKYT---NYSAVQELHRKGHEVAVHSITHNDDEN 251 (476)
Q Consensus 175 ~~~Pq~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~~---~~~~v~~l~~~GHEIg~Hs~~H~~~~~ 251 (476)
...++.|+||||||+....+++++++|++ ++++|||||+|.+. .++++++++++|||||+|||+|.....
T Consensus 103 ~~~~k~VaLTFDDGp~~~~t~~iLdiL~~-------~~vkATFFv~G~~i~~~~p~~vr~i~~~GheIgnHt~sH~~~~~ 175 (311)
T 2w3z_A 103 SAKQKLVFLTFDDGVDPNMTPKILDVLAQ-------QHVHATFFLVGCNITDKVKPILQRQITEGHALGIHSFSHVYSLL 175 (311)
T ss_dssp ---CCEEEEEEEEECCTTHHHHHHHHHHH-------TTCCCEEEECGGGCCGGGHHHHHHHHHTTCEEEECCSSCCHHHH
T ss_pred CCCCCEEEEEEcCCCCcccHHHHHHHHHH-------cCCcEEEEEeChhhcccCHHHHHHHHHCCCeeeccCCccccccc
Confidence 33468999999999998867899999999 99999999999764 358999999999999999999975421
Q ss_pred cc-CCCCHHHHHHHHHHHHHHHHHhhcccC--CcccEEecCCcccCch---HHHHHHHHcCCeEeeecccCCCCCCCCCc
Q psy16052 252 FW-SNATVDDWAKEMAGMRIIAEKYANLSD--NSVVGVRAPYLRVGGN---NQFTMMEEQAFLYDSTITAPLSNPPLWPY 325 (476)
Q Consensus 252 ~~-~~~s~e~~~~ei~~~~~~l~~~~~i~g--~~~~gfR~P~l~~~~~---~~~~~l~~~G~~Ydss~~~~~~~~p~~py 325 (476)
+. ..++.+++++||.++.++|++ +.| ..+++||+||+..+.. ...++|+++||.+- .|..
T Consensus 176 ~~~~~ls~~~~~~Ei~~~~~~L~~---~~G~~~~p~~fR~PyG~~~~~~~~~~~~~l~~~G~~~v-----------~W~v 241 (311)
T 2w3z_A 176 YPNRVGNTQQIVSEVTRTQNALKD---QLGQNFKTGVWRYPGGHLSWTGLEAADKQLAAQGIQWM-----------DWNA 241 (311)
T ss_dssp SGGGBCCHHHHHHHHHHHHHHHHH---HHCTTBCCCEECCTTCGGGCBCCHHHHHHHHTTTCEEC-----------CCSE
T ss_pred cccCCCCHHHHHHHHHHHHHHHHH---HhCCCCCCcEEECCCCCcChhHHHHHHHHHHHCCCEEE-----------cCCc
Confidence 11 258999999999999999994 677 7899999999998765 14578999999652 1211
Q ss_pred c-ccccCCCCcCCCCcCCCCCCCCeEEEeccccccCCCCCCCCCCCCCcccCCCCCCCChHHHHHHHHHHHHHHhccCCc
Q psy16052 326 T-MYFRMPHRCHGNLQHCPTRSHAVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRA 404 (476)
Q Consensus 326 t-l~~~~~~~c~~~~~~cp~~~~~lweiP~~~~~~~~~p~~~~~~~g~~~~d~~~~~~~~~~~~~~l~~~f~~~y~~~r~ 404 (476)
. .|+. .+ + ....+++++++.+...++ .+. .+.
T Consensus 242 d~~D~~--------------------------------------~~-----~--~~~~~~~~i~~~v~~~~~-~~~-~~~ 274 (311)
T 2w3z_A 242 AVGDAE--------------------------------------PL-----A--TRPTTVASMLAFLDGSAK-IAT-NPN 274 (311)
T ss_dssp ECCTTS--------------------------------------CG-----G--GCCCSHHHHHHHHHHHTT-TCS-CTT
T ss_pred cCCccc--------------------------------------cc-----c--cCCCCHHHHHHHHHHHhh-hcc-CCC
Confidence 0 0000 00 0 011356788888877765 222 223
Q ss_pred ceEEeecchhhcCChHHHHHHHHHHHHHHhhCCCEEEEeH
Q psy16052 405 PLGLYFHAAWLKNNPEFLDAFLYWVDEIIERHKDVYFVTM 444 (476)
Q Consensus 405 p~~i~~H~~w~~~~p~~~~al~~fl~~i~~~~~dV~fvT~ 444 (476)
..+|.+|. ..+++...++|.++|+++++ .++.|||+
T Consensus 275 g~IIL~Hd--~~g~~~t~~aL~~iI~~Lk~--~Gy~fvtl 310 (311)
T 2w3z_A 275 VQVVLMHD--ISEKTITLASLPQIIRYYKD--RGYTFAVL 310 (311)
T ss_dssp EEEEEEEC--STTCHHHHHHHHHHHHHHHH--TTCEECEE
T ss_pred CEEEEEeC--CCChhhHHHHHHHHHHHHHH--CCCEEEec
Confidence 46899994 23467889999999999986 69999985
No 10
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=99.89 E-value=2.7e-23 Score=201.50 Aligned_cols=191 Identities=16% Similarity=0.145 Sum_probs=143.2
Q ss_pred CCCeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEE-EecccCC--ChH-HHHHHHHcCCeeeeCCCCC--CCCc
Q psy16052 177 VPQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATF-FVSHKYT--NYS-AVQELHRKGHEVAVHSITH--NDDE 250 (476)
Q Consensus 177 ~Pq~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTF-Fv~~~~~--~~~-~v~~l~~~GHEIg~Hs~~H--~~~~ 250 (476)
.++.|+||||||+....+++++++|++ ++++||| ||++.+. +++ ++++++++|||||+|||+| ...
T Consensus 24 ~~k~VaLTFDDG~~~~~t~~il~iL~~-------~~v~ATF~Fv~g~~~~~~p~~~~~~i~~~GheIg~Ht~~H~~~~l- 95 (254)
T 2vyo_A 24 NSGMIAINFVDGPVRGVTDRILNTLDE-------LGVKATFSFTVNQKAVGNVGQLYRRAVEEGHNVALRVDPSMDEGY- 95 (254)
T ss_dssp SSSEEEEEEESCCCTTHHHHHHHHHHH-------HTCCCEEEECCSSCCCGGGTHHHHHHHHTTCEEEEECCGGGTTCG-
T ss_pred CCCEEEEEEeCCCCcccHHHHHHHHHH-------cCCCEEEEEccChHHhHCHHHHHHHHHhCCCEEEecCCCCCCcCc-
Confidence 357899999999987777899999999 9999999 9999764 347 9999999999999999999 764
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHhhcccCCcccEEecCC--cccCchHHHHHHHHcCCeEeeecccCCCCCCCCCcccc
Q psy16052 251 NFWSNATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPY--LRVGGNNQFTMMEEQAFLYDSTITAPLSNPPLWPYTMY 328 (476)
Q Consensus 251 ~~~~~~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~--l~~~~~~~~~~l~~~G~~Ydss~~~~~~~~p~~pytl~ 328 (476)
..++.+++++||.++.++|+ .++|..+++||+|| +..+.. ++++++++||.+- .|- .+
T Consensus 96 ---~~ls~~~~~~ei~~~~~~l~---~~~G~~~~~fr~P~~~G~~~~~-~~~~l~~~G~~~v-----------~w~--vd 155 (254)
T 2vyo_A 96 ---QCLSQDALENNVDREIDTID---GLSGTEIRYAAVPICNGQVNSE-MYNILTERGVLPV-----------GYT--FC 155 (254)
T ss_dssp ---GGSCHHHHHHHHHHHHHHHH---HHHTSCCCEEECCCBTTEECHH-HHHHHHTTTCEEC-----------CCS--BC
T ss_pred ---ccCCHHHHHHHHHHHHHHHH---HHHCCCCeEEeCCccCCCCCHH-HHHHHHHCCCEEE-----------Eec--cC
Confidence 56899999999999999999 47788999999999 998876 8999999999631 121 11
Q ss_pred ccCCCCcCCCCcCCCCCCCCeEEEeccccccCCCCCCCCCCCCCcccCCCCCCCChHHHHHHHHHHHHHHhccCCcceEE
Q psy16052 329 FRMPHRCHGNLQHCPTRSHAVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGL 408 (476)
Q Consensus 329 ~~~~~~c~~~~~~cp~~~~~lweiP~~~~~~~~~p~~~~~~~g~~~~d~~~~~~~~~~~~~~l~~~f~~~y~~~r~p~~i 408 (476)
. .|. . .+..+.+.+. +.........+|
T Consensus 156 ~------------------------------~Dw-----~--------------~~~~~~~~v~----~~~~~~~~g~Ii 182 (254)
T 2vyo_A 156 P------------------------------YDY-----D--------------DPVGEFESMI----EGSDPKHHSFII 182 (254)
T ss_dssp G------------------------------GGS-----S--------------SHHHHHHHHH----HTSCTTTCCEEE
T ss_pred C------------------------------ccc-----c--------------cchHHHHHHH----HhccccCCCcEE
Confidence 0 000 0 0001222221 111111113688
Q ss_pred eecchhhcCChHHHHHHHHHHHHHHhhCCCEEEEeHHH-HHHHhhCC
Q psy16052 409 YFHAAWLKNNPEFLDAFLYWVDEIIERHKDVYFVTMTQ-VIQWIQNP 454 (476)
Q Consensus 409 ~~H~~w~~~~p~~~~al~~fl~~i~~~~~dV~fvT~~q-i~~w~~~p 454 (476)
.+|.. . +...++|.++|+++++ .+++|||.+| +++|-+.+
T Consensus 183 L~Hd~-~---~~t~~aL~~ii~~l~~--~Gy~fvtl~e~l~~~~~~~ 223 (254)
T 2vyo_A 183 LMHDG-Q---EADTSRLENMVKIGKD--KGYRFVNMDECLQGYKGAP 223 (254)
T ss_dssp EEEGG-G---GSSCHHHHHHHHHHHH--HTCEECCHHHHTTTCC---
T ss_pred EEeCC-c---hhHHHHHHHHHHHHHH--CCCEEEEchHhhhcccccC
Confidence 99943 2 4567899999999987 5899999999 88876533
No 11
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=99.89 E-value=1.5e-22 Score=191.66 Aligned_cols=186 Identities=19% Similarity=0.252 Sum_probs=139.0
Q ss_pred CCeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEEEecccCCC--hH-HHHHHHHcCCeeeeCCCCCCCCccccC
Q psy16052 178 PQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKYTN--YS-AVQELHRKGHEVAVHSITHNDDENFWS 254 (476)
Q Consensus 178 Pq~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~~~--~~-~v~~l~~~GHEIg~Hs~~H~~~~~~~~ 254 (476)
.+.|+||||||+....+++++++|++ ++++|||||++.+.. ++ ++++|+++|||||+|||+|..+ .
T Consensus 4 ~k~V~LTFDDG~~~~~t~~il~iL~~-------~~v~ATfFv~g~~~~~~p~~~~~~~~~~GheIg~Ht~~H~~l----~ 72 (216)
T 2c71_A 4 NKLVALTFDDGPDNVLTARVLDKLDK-------YNVKATFMVVGQRVNDSTAAIIRRMVNSGHEIGNHSWSYSGM----A 72 (216)
T ss_dssp -CEEEEEEESCCCHHHHHHHHHHHHH-------HTCCCEEEECGGGCSHHHHHHHHHHHHTTCEEEECCSSSSCC----T
T ss_pred CCEEEEEEecCCCcccHHHHHHHHHH-------cCCCEEEEEEChhhhhCHHHHHHHHHHCCCEEeeCCcCCcch----h
Confidence 36899999999987767799999999 999999999998654 35 9999999999999999999985 5
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcccCchHHHHHHHHcCCeEeeecccCCCCCCCCCccccccCCCC
Q psy16052 255 NATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPHR 334 (476)
Q Consensus 255 ~~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~~~~~~~~~~l~~~G~~Ydss~~~~~~~~p~~pytl~~~~~~~ 334 (476)
.++.+++++||.++.++|+ .++|..+++||+||+..+.. +.+++++ ++.|+.+. -.|..
T Consensus 73 ~ls~~~~~~ei~~~~~~l~---~~~G~~~~~fr~P~G~~~~~-~~~~l~~-~i~w~~d~-------~Dw~~--------- 131 (216)
T 2c71_A 73 NMSPDQIRKSIADTNAVIQ---KYAGTTPKFFRPPNLETSPT-LFNNVDL-VFVGGLTA-------NDWIP--------- 131 (216)
T ss_dssp TCCHHHHHHHHHHHHHHHH---HHHSCCCSEECCGGGCCCHH-HHHHCCS-EEBCCBCC-------STTCT---------
T ss_pred hCCHHHHHHHHHHHHHHHH---HhhCCCCeEEECCCCCCCHH-HHHHHHh-ceEEEecc-------ccccC---------
Confidence 6899999999999999999 47788999999999999875 6666655 32211000 01100
Q ss_pred cCCCCcCCCCCCCCeEEEeccccccCCCCCCCCCCCCCcccCCCCCCCChHHHHHHHHHHHHHHhccCCcceEEeecchh
Q psy16052 335 CHGNLQHCPTRSHAVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAW 414 (476)
Q Consensus 335 c~~~~~~cp~~~~~lweiP~~~~~~~~~p~~~~~~~g~~~~d~~~~~~~~~~~~~~l~~~f~~~y~~~r~p~~i~~H~~w 414 (476)
..+++++.+.+... . .++ -+|.+|...
T Consensus 132 ----------------------------------------------~~~~~~i~~~v~~~----~-~~g--~IiL~Hd~~ 158 (216)
T 2c71_A 132 ----------------------------------------------STTAEQRAAAVING----V-RDG--TIILLHDVQ 158 (216)
T ss_dssp ----------------------------------------------TSCHHHHHHHHHHH----C-CTT--BEEEEESCC
T ss_pred ----------------------------------------------CCCHHHHHHHHHhc----C-CCC--cEEEEECCC
Confidence 02345555444322 1 123 378899431
Q ss_pred hcCChHHHHHHHHHHHHHHhhCCCEEEEeHHHHHHHh
Q psy16052 415 LKNNPEFLDAFLYWVDEIIERHKDVYFVTMTQVIQWI 451 (476)
Q Consensus 415 ~~~~p~~~~al~~fl~~i~~~~~dV~fvT~~qi~~w~ 451 (476)
.......++|.++|+++++ .++.|||.+|++.--
T Consensus 159 -~~~~~t~~al~~ii~~l~~--~Gy~fvtl~ell~~~ 192 (216)
T 2c71_A 159 -PEPHPTPEALDIIIPTLKS--RGYEFVTLTELFTLK 192 (216)
T ss_dssp -SSSCCHHHHHHHHHHHHHH--TTCEECCHHHHHHHH
T ss_pred -CChHHHHHHHHHHHHHHHH--CCCEEEEhHHhhcCc
Confidence 1123467899999999986 699999999998644
No 12
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=99.89 E-value=1.6e-22 Score=195.25 Aligned_cols=118 Identities=19% Similarity=0.310 Sum_probs=105.6
Q ss_pred CCCeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEEEecccCC--ChHHHHHHHHcCCeeeeCCCCCCCCccccC
Q psy16052 177 VPQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKYT--NYSAVQELHRKGHEVAVHSITHNDDENFWS 254 (476)
Q Consensus 177 ~Pq~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~~--~~~~v~~l~~~GHEIg~Hs~~H~~~~~~~~ 254 (476)
.++.|+||||||+....+++++++|++ ++++|||||++.+. +++++++|+++|||||+|||+|..+ .
T Consensus 53 ~~k~V~LTFDDG~~~~~t~~il~iL~~-------~~v~ATfFv~g~~~~~~p~~~~~~~~~GheIg~Ht~~H~~l----~ 121 (247)
T 2j13_A 53 KKKDIYLTFDNGYENGYTGKILDVLKE-------KKVPATFFVTGHYIKTQKDLLLRMKDEGHIIGNHSWSHPDF----T 121 (247)
T ss_dssp TSCEEEEEEEESSCCSCHHHHHHHHHH-------HTCCEEEEECHHHHHHCHHHHHHHHHTTCEEEECCSSCCCG----G
T ss_pred CCCEEEEEEeCCCCcccHHHHHHHHHH-------cCCCEEEEEeChhhhhCHHHHHHHHHCCCEEEecCCCCcCh----h
Confidence 357999999999887777899999999 89999999998753 4599999999999999999999975 5
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcccCCc-ccEEecCCcccCchHHHHHHHHcCCeE
Q psy16052 255 NATVDDWAKEMAGMRIIAEKYANLSDNS-VVGVRAPYLRVGGNNQFTMMEEQAFLY 309 (476)
Q Consensus 255 ~~s~e~~~~ei~~~~~~l~~~~~i~g~~-~~gfR~P~l~~~~~~~~~~l~~~G~~Y 309 (476)
.++.+++++||.++.++|+ .++|.. +++||+||+..+.. ++++++++||.+
T Consensus 122 ~ls~~~~~~ei~~~~~~l~---~~~G~~~~~~fr~P~G~~~~~-~~~~l~~~G~~~ 173 (247)
T 2j13_A 122 AVNDEKLREELTSVTEEIK---KVTGQKEVKYVRPPRGVFSER-TLALTKEMGYYN 173 (247)
T ss_dssp GSCHHHHHHHHHHHHHHHH---HHHCCSCCCEECCGGGEECHH-HHHHHHHTTCEE
T ss_pred hCCHHHHHHHHHHHHHHHH---HHhCCCCCcEEeCCCCCCCHH-HHHHHHHCCCEE
Confidence 6899999999999999999 477877 89999999999876 899999999964
No 13
>2c1i_A Peptidoglycan glcnac deacetylase; carbohydrate esterase, peptidoglycan deacetylase, metalloenzyme, D275N mutant, hydrolase; HET: MES; 1.35A {Streptococcus pneumoniae} SCOP: c.6.2.3 d.341.1.1 PDB: 2c1g_A
Probab=99.86 E-value=2.1e-21 Score=200.63 Aligned_cols=183 Identities=20% Similarity=0.289 Sum_probs=140.3
Q ss_pred CCeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEEEecccCC--ChHHHHHHHHcCCeeeeCCCCCCCCccccCC
Q psy16052 178 PQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKYT--NYSAVQELHRKGHEVAVHSITHNDDENFWSN 255 (476)
Q Consensus 178 Pq~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~~--~~~~v~~l~~~GHEIg~Hs~~H~~~~~~~~~ 255 (476)
++.|+||||||+....++.++++|++ ++++|||||++.+. +++++++|+++|||||+|||+|..+ ..
T Consensus 235 ~k~VaLTFDDGp~~~~t~~il~iL~k-------~~vkATFFvig~~i~~~p~~lr~m~~~GheIgnHT~sH~~l----~~ 303 (431)
T 2c1i_A 235 QKVVALTFNDGPNPATTPQVLETLAK-------YDIKATFFVLGKNVSGNEDLVKRIKSEGHVVGNHSWSHPIL----SQ 303 (431)
T ss_dssp CCEEEEEEESCCCTTTHHHHHHHHHH-------TTCCCEEEECGGGTTTCHHHHHHHHHTTCEEEECCSSCCCG----GG
T ss_pred CCEEEEEEeCCCCcchHHHHHHHHHH-------cCCcEEEEEECccccCCHHHHHHHHHCCCEEeecCCCCccc----cc
Confidence 57999999999998877899999999 99999999999764 5699999999999999999999985 56
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcccCchHHHHHHHHcCCeEeeecccCCCCCCCCCccccccCCCCc
Q psy16052 256 ATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPHRC 335 (476)
Q Consensus 256 ~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~~~~~~~~~~l~~~G~~Ydss~~~~~~~~p~~pytl~~~~~~~c 335 (476)
++.+++++||.++.++|+ .++|..+++||+||+..+.. +++.+|+.+- .| +.+
T Consensus 304 ls~~~~~~EI~~s~~~L~---~~~G~~~~~fr~PyG~~n~~----v~~~~G~~~v-----------~W--svD------- 356 (431)
T 2c1i_A 304 LSLDEAKKQITDTEDVLT---KVLGSSSKLMRPPYGAITDD----IRNSLDLSFI-----------MW--DVD------- 356 (431)
T ss_dssp SCHHHHHHHHHHHHHHHH---HHHSCCCCEECCGGGCCCHH----HHHTSSCEEE-----------CC--SEE-------
T ss_pred CCHHHHHHHHHHHHHHHH---HhhCCCCeEEECCCCCCCHH----HHHHCCCeEE-----------Ee--ecc-------
Confidence 899999999999999999 47788999999999998764 3455666421 12 111
Q ss_pred CCCCcCCCCCCCCeEEEeccccccCCCCCCCCCCCCCcccCCCCCCCChHHHHHHHHHHHHHHhccCCcceEEeecchhh
Q psy16052 336 HGNLQHCPTRSHAVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAWL 415 (476)
Q Consensus 336 ~~~~~~cp~~~~~lweiP~~~~~~~~~p~~~~~~~g~~~~d~~~~~~~~~~~~~~l~~~f~~~y~~~r~p~~i~~H~~w~ 415 (476)
...|. ..+++.+++.+.. ... ++ -+|.+| .
T Consensus 357 ------------------s~Dw~----------------------~~~~~~i~~~v~~----~~~-~G--~IIL~H-D-- 386 (431)
T 2c1i_A 357 ------------------SLDWK----------------------SKNEASILTEIQH----QVA-NG--SIVLMH-D-- 386 (431)
T ss_dssp ------------------CCHHH----------------------HCCHHHHHHHHHH----HCC-TT--EEEEEE-T--
T ss_pred ------------------CCccc----------------------cCCHHHHHHHHHH----hcc-CC--CEEEEC-C--
Confidence 00000 0133444444332 221 22 478899 3
Q ss_pred cCChHHHHHHHHHHHHHHhhCCCEEEEeHHHHHHHh
Q psy16052 416 KNNPEFLDAFLYWVDEIIERHKDVYFVTMTQVIQWI 451 (476)
Q Consensus 416 ~~~p~~~~al~~fl~~i~~~~~dV~fvT~~qi~~w~ 451 (476)
+.+..+++|.++|+++++ .+++|||.+|++..-
T Consensus 387 -~~~~tv~aL~~iI~~Lk~--~Gy~fvtl~ell~~~ 419 (431)
T 2c1i_A 387 -IHSPTVNALPRVIEYLKN--QGYTFVTIPEMLNTR 419 (431)
T ss_dssp -TSHHHHHHHHHHHHHHHH--TTCEECCHHHHHGGG
T ss_pred -CchHHHHHHHHHHHHHHH--CCCEEEEHHHHhcCC
Confidence 246789999999999987 589999999998743
No 14
>3hft_A WBMS, polysaccharide deacetylase involved in O-AN biosynthesis; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Bordetella bronchiseptica}
Probab=99.81 E-value=8.8e-21 Score=177.32 Aligned_cols=141 Identities=18% Similarity=0.156 Sum_probs=105.0
Q ss_pred CeEEEeecCCCCCcc-HHHHHHHHhccCCCCCCCCceEEEEecccCCChHHHHHHHHcCCeeeeCCCCCCCCccccCCCC
Q psy16052 179 QMITITFDDAINNNN-IALYKEMFNGKRKNPNGCDIKATFFVSHKYTNYSAVQELHRKGHEVAVHSITHNDDENFWSNAT 257 (476)
Q Consensus 179 q~V~lTFDdg~~~~~-~~~~l~ll~~~~~np~~c~i~aTFFv~~~~~~~~~v~~l~~~GHEIg~Hs~~H~~~~~~~~~~s 257 (476)
+.|+||||.+..... .++++++|++ ++||||||++|.++ .+++.+.++|||||+|++.|.... ...
T Consensus 37 k~iaLTFDi~Wg~~~~iprILdiL~~-------~~VkATFFv~G~~p--~i~k~I~~~GHEIG~H~~~~~ls~----~~~ 103 (257)
T 3hft_A 37 GRIFLTFDIDWAADFVLQDTIDLIEG-------AGVCATWFATHSTP--LLENIRRNPLFELGVHPNFNPLLA----GAH 103 (257)
T ss_dssp TCEEEEEECTTCCHHHHHHHHHHHHH-------HTCCEEEEECSCCT--HHHHHHHCTTEEEEECCCCHHHHH----SCC
T ss_pred ceEEEEEECCCcchhhHHHHHHHHHH-------cCCCeEEEecCCCH--HHHHHHHHCCcEEEeCCCccccCh----hhh
Confidence 589999998877766 5999999999 99999999999886 677777889999999987765321 111
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcccCchHHHHHHHHcCCeEeeeccc-CCCCCCCCCccccccCCCCcC
Q psy16052 258 VDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITA-PLSNPPLWPYTMYFRMPHRCH 336 (476)
Q Consensus 258 ~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~~~~~~~~~~l~~~G~~Ydss~~~-~~~~~p~~pytl~~~~~~~c~ 336 (476)
.++.++.|.++.+++. .++|||+|.+..+.. ++++|++.||+||||++. +..+...-||...
T Consensus 104 ~~e~ee~L~r~leil~--------~pvGyRaPsw~~s~~-tl~lL~e~Gf~YDSSl~~~gD~~~dd~PY~~~-------- 166 (257)
T 3hft_A 104 AEGVQEILDRTLELAP--------GCVSVRSHSLVQATS-ILNMFGERRLRYDCNILVPWDAGIVLQPWRHW-------- 166 (257)
T ss_dssp SCCHHHHHHHHHTTST--------TCCEECCGGGCCCHH-HHHHHHHTTCCEECCCBCCTTSSCCCCCEECS--------
T ss_pred hHHHHHHHHHHHhccc--------CceEEECCCccCCHh-HHHHHHHcCCcEEcccCcCCCcccCcCCeEcC--------
Confidence 2122255555533322 489999999999987 999999999999999962 2123345666521
Q ss_pred CCCcCCCCCCCCeEEEeccccc
Q psy16052 337 GNLQHCPTRSHAVWEMVMNELD 358 (476)
Q Consensus 337 ~~~~~cp~~~~~lweiP~~~~~ 358 (476)
..+|+|||+++.+
T Consensus 167 ---------~G~LVEiPv~We~ 179 (257)
T 3hft_A 167 ---------TGDMVRVPYLWED 179 (257)
T ss_dssp ---------STTCEECCBCEEH
T ss_pred ---------CCCEEEEeceeec
Confidence 1259999998854
No 15
>3vus_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; deacetyl hydrolase; 1.65A {Escherichia coli}
Probab=99.69 E-value=4.7e-17 Score=158.66 Aligned_cols=125 Identities=14% Similarity=0.173 Sum_probs=100.0
Q ss_pred CCeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEEEecccC---------------------CChHHHHHHHHcC
Q psy16052 178 PQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKY---------------------TNYSAVQELHRKG 236 (476)
Q Consensus 178 Pq~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~---------------------~~~~~v~~l~~~G 236 (476)
++.|+||||||+.... ..++.+|++ ++++|||||++.+ .+++++++|.+.|
T Consensus 65 ~~~v~lTfDDg~~~~~-~~~~~~l~~-------~~~~atfFv~~~~v~~~~~~~~~~g~~~~~~~~~lt~~~lr~m~~~G 136 (268)
T 3vus_A 65 EKAVVLTFDDGYQSFY-TRVFPILQA-------FQWPAVWAPVGSWVDTPADKQVKFGDELVDREYFATWQQVREVARSR 136 (268)
T ss_dssp TTEEEEEEEETBHHHH-HHHHHHHHH-------HTCCEEEEECHHHHTSCSSSCEEETTEEECGGGBCCHHHHHHHHHTT
T ss_pred CCEEEEEEeCCchhHH-HHHHHHHHH-------cCCCEEEEEeccccCCccccccccccccccccccCCHHHHHHHHHCC
Confidence 4789999999996554 568899999 9999999998732 2568999999999
Q ss_pred -CeeeeCCCC-CCCCcc--------------cc----CCCC----HHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcc
Q psy16052 237 -HEVAVHSIT-HNDDEN--------------FW----SNAT----VDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLR 292 (476)
Q Consensus 237 -HEIg~Hs~~-H~~~~~--------------~~----~~~s----~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~ 292 (476)
||||+||++ |..... |+ ...+ .+++++||.+++++|+ .++|..++.||+||+.
T Consensus 137 ~~eIgsHT~~hH~~~~~~~~G~~~p~~~~~~y~~~~~~~es~~~~~~~i~~ei~~s~~~l~---~~~G~~~~~fr~PyG~ 213 (268)
T 3vus_A 137 LVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLR---TKVEVNPHVFVWPYGE 213 (268)
T ss_dssp SEEECBCCSSCCSBCCCC-----CBTTSSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHH---HHSCCCCCEEECGGGC
T ss_pred CeEEecCccccccccccccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---HHhCCCCCEEEeCCCc
Confidence 999999999 443210 00 0124 4567788999999998 5789999999999999
Q ss_pred cCchHHHHHHHHcCCeEeeecc
Q psy16052 293 VGGNNQFTMMEEQAFLYDSTIT 314 (476)
Q Consensus 293 ~~~~~~~~~l~~~G~~Ydss~~ 314 (476)
++.. +.++++++||.+..+..
T Consensus 214 ~n~~-~~~~~~~~Gy~~a~t~~ 234 (268)
T 3vus_A 214 ANGI-AIEELKKLGYDMFFTLE 234 (268)
T ss_dssp CCHH-HHHHHHHTTCCEEECCC
T ss_pred CCHH-HHHHHHHCCCcEEEEec
Confidence 9986 89999999998766654
No 16
>4f9d_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; family 4 carbohydrate esterase, TIM barrel, hydrolase, deace carbohydrate/sugar binding; HET: MES; 1.90A {Escherichia coli} PDB: 4f9j_A*
Probab=99.55 E-value=5e-15 Score=158.50 Aligned_cols=125 Identities=14% Similarity=0.162 Sum_probs=101.1
Q ss_pred CCeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEEEecccC---------------------CChHHHHHHHHcC
Q psy16052 178 PQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKY---------------------TNYSAVQELHRKG 236 (476)
Q Consensus 178 Pq~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~---------------------~~~~~v~~l~~~G 236 (476)
++.|+||||||+... ...++.||++ ++++|||||++.+ .++++|++|.+.|
T Consensus 69 ~K~V~LTFDDGy~d~-y~~AlPILkk-------ygvpATfFVig~~i~~~~~~~~~~~~~~~~~~~~lsw~qlrem~~sG 140 (618)
T 4f9d_A 69 EKAVVLTFDDGYQSF-YTRVFPILQA-------FQWPAVWAPVGSWVDTPADKQVKFGDELVDREYFATWQQVREVARSR 140 (618)
T ss_dssp TTEEEEEEEETBHHH-HHTHHHHHHH-------HTCCEEEEECHHHHTSCTTSCEEETTEEECGGGBCCHHHHHHHHHHT
T ss_pred CCEEEEEEecCCccc-HHHHHHHHHH-------cCCCEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHCC
Confidence 478999999999544 4577899999 9999999997632 2469999999999
Q ss_pred -CeeeeCCCC-CCCCcc---------ccC---------CCC----HHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcc
Q psy16052 237 -HEVAVHSIT-HNDDEN---------FWS---------NAT----VDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLR 292 (476)
Q Consensus 237 -HEIg~Hs~~-H~~~~~---------~~~---------~~s----~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~ 292 (476)
||||+||++ |..... .++ .++ .+++++||.++++.|+ .++|..+..||+||+.
T Consensus 141 ~~EIGsHT~shH~~l~~~p~G~~~Pa~l~r~~~~~~~~~es~~e~~~~i~~EL~~Sk~~Le---~~lG~~~~~FayPyG~ 217 (618)
T 4f9d_A 141 LVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLR---TKVEVNPHVFVWPYGE 217 (618)
T ss_dssp SEEECBCCSSCCSEEECSTTCCEEEGGGSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHH---HHHCCCCCEEECGGGC
T ss_pred CcEEeecccccccccccccccccccchhcccccccccccCCHHHHHHHHHHHHHHHHHHHH---HhcCCCCCEEEcCCCC
Confidence 599999998 764310 001 124 3678899999999999 5789999999999999
Q ss_pred cCchHHHHHHHHcCCeEeeecc
Q psy16052 293 VGGNNQFTMMEEQAFLYDSTIT 314 (476)
Q Consensus 293 ~~~~~~~~~l~~~G~~Ydss~~ 314 (476)
++.. +.+++++.||.+..+..
T Consensus 218 ~n~~-~~~~ake~Gy~~afTt~ 238 (618)
T 4f9d_A 218 ANGI-AIEELKKLGYDMFFTLE 238 (618)
T ss_dssp CCHH-HHHHHHHTTCCEEECCC
T ss_pred CCHH-HHHHHHHcCCEEEEEec
Confidence 9986 99999999998876664
No 17
>4hd5_A Polysaccharide deacetylase; TIM barrel, hydrolase; 1.90A {Bacillus cereus}
Probab=99.51 E-value=4e-14 Score=141.46 Aligned_cols=120 Identities=21% Similarity=0.302 Sum_probs=93.5
Q ss_pred CCeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEEEeccc------CCChHHHHHHHHcC-CeeeeCCCCCCCCc
Q psy16052 178 PQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHK------YTNYSAVQELHRKG-HEVAVHSITHNDDE 250 (476)
Q Consensus 178 Pq~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~------~~~~~~v~~l~~~G-HEIg~Hs~~H~~~~ 250 (476)
++.|+||||||+.... . ...||++ + +-.++++++||||.+. +.++++|++|.+.| ||||+||++|..+.
T Consensus 197 ~K~V~LTFDDGy~d~y-~-A~PILkk-~-~~~~~~~~AT~Fvi~~~i~~~~~Lsw~qIrem~~~G~~eIGsHT~sH~~L~ 272 (360)
T 4hd5_A 197 NKPIFVTFDDGMKNNM-N-AFRVLQK-L-KDDTFKPAATEYMIVDNVDVEGALSTSEIKEMVDSGIFSVQSHTATHADLP 272 (360)
T ss_dssp SSEEEEEEEECBTTHH-H-HHHHHHH-H-CCSSCCCCEEEEECGGGTTSTTBCCHHHHHHHHHTTSEEEEECCSSCCCGG
T ss_pred CCeEEEEEeCCCCcHH-H-HHHHHHH-h-cccccccceEEEEEecccccccCCCHHHHHHHHHcCCceeeccCCcccccc
Confidence 4679999999986644 2 5567765 2 1123689999999764 34679999999999 79999999999864
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcccCchHHHHHHHHcCCeEeee
Q psy16052 251 NFWSNATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDST 312 (476)
Q Consensus 251 ~~~~~~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~~~~~~~~~~l~~~G~~Ydss 312 (476)
.++. +++||.++++.|+ .+.|..+..|++||+.++.. +.+++++ ||.+..+
T Consensus 273 ----~ls~--~e~EI~~Sk~~Le---~~lG~~v~~FAYPyG~yn~~-v~~~ak~-gy~~AfT 323 (360)
T 4hd5_A 273 ----KITN--YEEELKGSKEKLE---KITGKPVIAIAYXFGHVDDK-VVTETKK-YYQFATT 323 (360)
T ss_dssp ----GCSC--HHHHHHHHHHHHH---HHHSSCCCEEECGGGCCCHH-HHHHHTT-TCSEEEE
T ss_pred ----cCCH--HHHHHHHHHHHHH---HHhCCCCcEEEcCCCCCCHH-HHHHHHh-CCcEEEE
Confidence 4543 4579999999999 47889999999999999876 7777765 7765444
No 18
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.44 E-value=8.3e-14 Score=110.54 Aligned_cols=73 Identities=27% Similarity=0.631 Sum_probs=62.9
Q ss_pred cccccCCCCcccccccccccCCcccccccccccc-cccCCCCCCCCCCCCC-CceecCCCCccCCCcccCCCCCCCCCCC
Q psy16052 56 LQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKE-RKVKPLLYTDEPLCQD-GFLACGDGACIERGLFCNGEKDCNDGSD 133 (476)
Q Consensus 56 ~~~~~C~~g~~~~~~~~~C~~~~~~~~C~~~~de-~~c~~~~~~~~~~C~~-~~~~C~~g~Ci~~~~~C~g~~dC~d~sD 133 (476)
..+|+|.+|.++. ..++| +++.+|.++||| ..|.. ..|.+ .+|+|.+|+||+..++|||..||.|+||
T Consensus 7 ~~~f~C~~g~Ci~-~~~~C---Dg~~DC~DgsDE~~~C~~------~~C~~~~~f~C~~g~CI~~~~~CDG~~DC~DgSD 76 (82)
T 2fyj_A 7 PNQFSCASGRCIP-ISWTC---DLDDDCGDRSDESASCAY------PTCFPLTQFTCNNGRCININWRCDNDNDCGDNSD 76 (82)
T ss_dssp TTEEETTSSCEEE-TTSSS---SCSSSSCSTTTTTSSCCC------SSSCSSSEEECTTSCEEETTCBSSSSBCCSSSSS
T ss_pred CCceEeCCCCEEe-ccccC---CCcccCCCcccccccccc------ccCCCCCceECCCCCeEcHHHccCCCCcCCCCcc
Confidence 4689999987765 45677 889999999999 78853 35854 8999999999999999999999999999
Q ss_pred CCCCC
Q psy16052 134 ENTCD 138 (476)
Q Consensus 134 e~~c~ 138 (476)
|.+|.
T Consensus 77 E~~C~ 81 (82)
T 2fyj_A 77 EAGCS 81 (82)
T ss_dssp CSCCC
T ss_pred ccCCC
Confidence 99885
No 19
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.39 E-value=7.4e-14 Score=110.12 Aligned_cols=73 Identities=26% Similarity=0.616 Sum_probs=62.6
Q ss_pred cccccCCCCcccccccccccCCcccccccccccccccCCCCCCCCCCCCCCceecCCCCccCCCcccCCCCCCCCCCCC-
Q psy16052 56 LQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCNGEKDCNDGSDE- 134 (476)
Q Consensus 56 ~~~~~C~~g~~~~~~~~~C~~~~~~~~C~~~~de~~c~~~~~~~~~~C~~~~~~C~~g~Ci~~~~~C~g~~dC~d~sDe- 134 (476)
..+|+|.+|.++. ..++| +++.||.++|||..|.. ..|.+.+|+|.+|+||+..|+|||..||.|+|||
T Consensus 5 ~~~F~C~~g~CI~-~~~~C---Dg~~DC~DgSDE~~C~~------~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~ 74 (80)
T 2fcw_B 5 QAEFRCHDGKCIS-RQFVC---DSDRDCLDGSDEASCPV------LTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEW 74 (80)
T ss_dssp TTEEECTTSCEEE-GGGTT---SSSCCSTTCTTTTTHHH------HHCCTTEEECTTSCEEEGGGTTSSSCCSTTCGGGC
T ss_pred CCccCCCCCCEEe-eeccc---CCcccCCCccccccccc------ccCCceeeECCCCCEEecccccCCCcCCCCCCCcC
Confidence 4689999987665 45677 88999999999999953 2498999999999999999999999999999999
Q ss_pred -CCCC
Q psy16052 135 -NTCD 138 (476)
Q Consensus 135 -~~c~ 138 (476)
..|.
T Consensus 75 ~~~C~ 79 (80)
T 2fcw_B 75 PQRCR 79 (80)
T ss_dssp GGGC-
T ss_pred cccCC
Confidence 6664
No 20
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.34 E-value=2.3e-12 Score=141.81 Aligned_cols=139 Identities=22% Similarity=0.444 Sum_probs=89.4
Q ss_pred ccccCcccccccccccCCCC-CCceeeccCC------CCCCCCCccccCCCC-----------cccccCCCCcccccccc
Q psy16052 11 EETSTKKEESFEHELCKDKD-AGEWFRLVAG------EGDNCRDVIQCTSSG-----------LQAIRCPAGLYFDIEKQ 72 (476)
Q Consensus 11 ~~~~~~~~~~~~~~~C~~~~-~~~~~~~~~~------~~~~C~~~~~C~~g~-----------~~~~~C~~g~~~~~~~~ 72 (476)
.++++.+||.+ +.|..+. ....|++..+ ..--|++...|.+|+ ..+|+|.+|.++. ..+
T Consensus 29 ~dC~d~sDE~~--~~C~~~~C~~~~f~C~~~~~~Ci~~~~~Cdg~~dC~dgsDE~~C~~~~C~~~~f~C~~g~Ci~-~~~ 105 (699)
T 1n7d_A 29 AECQDGSDESQ--ETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDGKCIS-RQF 105 (699)
T ss_dssp -----------------CCSCSSSSCCCCC--CCCCCSSSTTSSSCCC-CCCTTTSCSSCCCCSSCCCSSCC-----CCC
T ss_pred ccCCCCCCCCc--cccCCcCCCCCccCCCCCCCceeCcceecCCcccCCCCcccCcccccccccCcEEcCCCCEec-HHH
Confidence 35666666632 2354322 1235555542 122377777777765 3478888887654 345
Q ss_pred cccCCcccccccccccccccCCCCCCCCCCCCCCceecCCCCccCCCcccCCCCCCCCCCCC--CCCCC--------CCC
Q psy16052 73 TCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCNGEKDCNDGSDE--NTCDS--------END 142 (476)
Q Consensus 73 ~C~~~~~~~~C~~~~de~~c~~~~~~~~~~C~~~~~~C~~g~Ci~~~~~C~g~~dC~d~sDe--~~c~~--------~~~ 142 (476)
.| +++.+|.+++||..|.. ..|.+.+|+|.+|+||+..|+|||..||.|+||| .+|.. ..+
T Consensus 106 ~C---dg~~dC~dgsDE~~C~~------~~C~~~~f~C~~~~Ci~~~~~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~~C 176 (699)
T 1n7d_A 106 VC---DSDRDCLDGSDEASCPV------LTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPC 176 (699)
T ss_dssp TT---CSSCCSSSSCSSSSCCC------CCCCSSCCCCSSSCCCCTTSTTCSSCCSSSSSSSSCSSSSCCCCCSSCCCCS
T ss_pred cC---CCcCcCCCCCccCCcCc------cccCccccCCCCCcccchhcccCCCCcCCCCcccccccCCCcccccCCCCCC
Confidence 66 78889999999999953 3699999999999999999999999999999999 89964 245
Q ss_pred CCCCCCCCCCcccCCcccc
Q psy16052 143 PNRAPPCDPAVCVLPDCFC 161 (476)
Q Consensus 143 ~~~~~~C~~~~C~~p~C~C 161 (476)
....|.|.++.|++....|
T Consensus 177 ~~~~f~C~~g~Ci~~~~~C 195 (699)
T 1n7d_A 177 SAFEFHCLSGECIHSSWRC 195 (699)
T ss_dssp CSSSCCCSSSCCCSTTCTT
T ss_pred CCcceecCCCceEechhcc
Confidence 6678899988888755444
No 21
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.31 E-value=3.1e-12 Score=140.83 Aligned_cols=97 Identities=25% Similarity=0.572 Sum_probs=75.1
Q ss_pred cccccCCCC--cccccccccccCCcccccccccccccccCCCCCCCCCCCCCCceecCCCCccCCCcccCCCCCCCCCCC
Q psy16052 56 LQAIRCPAG--LYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCNGEKDCNDGSD 133 (476)
Q Consensus 56 ~~~~~C~~g--~~~~~~~~~C~~~~~~~~C~~~~de~~c~~~~~~~~~~C~~~~~~C~~g~Ci~~~~~C~g~~dC~d~sD 133 (476)
..+|+|..| .++ ...++| ++..||.++|||..|.. ..|...+|+|.+|+||+..++|||..||.|+||
T Consensus 49 ~~~f~C~~~~~~Ci-~~~~~C---dg~~dC~dgsDE~~C~~------~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~dgsD 118 (699)
T 1n7d_A 49 SGDFSCGGRVNRCI-PQFWRC---DGQVDCDNGSDEQGCPP------KTCSQDEFRCHDGKCISRQFVCDSDRDCLDGSD 118 (699)
T ss_dssp SSSCCCCC--CCCC-CSSSTT---SSSCCC-CCCTTTSCSS------CCCCSSCCCSSCC----CCCTTCSSCCSSSSCS
T ss_pred CCccCCCCCCCcee-Ccceec---CCcccCCCCcccCcccc------cccccCcEEcCCCCEecHHHcCCCcCcCCCCCc
Confidence 347788764 333 345666 88999999999999964 359999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcccCCccccC
Q psy16052 134 ENTCDSENDPNRAPPCDPAVCVLPDCFCS 162 (476)
Q Consensus 134 e~~c~~~~~~~~~~~C~~~~C~~p~C~C~ 162 (476)
|.+|....++...|.|.++.|++....|.
T Consensus 119 E~~C~~~~C~~~~f~C~~~~Ci~~~~~Cd 147 (699)
T 1n7d_A 119 EASCPVLTCGPASFQCNSSTCIPQLWACD 147 (699)
T ss_dssp SSSCCCCCCCSSCCCCSSSCCCCTTSTTC
T ss_pred cCCcCccccCccccCCCCCcccchhcccC
Confidence 99999878888899999999997554443
No 22
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.17 E-value=2.4e-12 Score=143.13 Aligned_cols=108 Identities=24% Similarity=0.598 Sum_probs=0.0
Q ss_pred CCCccccCCCC-------------cccccCCC--CcccccccccccCCcccccccccccccccCCCCCCCCCCCCCCcee
Q psy16052 45 CRDVIQCTSSG-------------LQAIRCPA--GLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLA 109 (476)
Q Consensus 45 C~~~~~C~~g~-------------~~~~~C~~--g~~~~~~~~~C~~~~~~~~C~~~~de~~c~~~~~~~~~~C~~~~~~ 109 (476)
|++...|.+|+ ..+|+|.. |.++. ..++| |++.||.|++||..|.. ..|.+.+|+
T Consensus 43 CDg~~dC~D~sDE~~~~C~~~~C~~~~f~C~~~~~~Ci~-~~~~C---Dg~~dC~dgsDE~~C~~------~~C~~~~f~ 112 (791)
T 3m0c_C 43 CDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIP-QFWRC---DGQVDCDNGSDEQGCPP------KTCSQDEFR 112 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCccCCCCCcccccccccCccCcCccccCCCCCCEee-ccccC---CCCcCcCCCcccCCccC------ccccCCeEE
Confidence 66666666655 33577765 44433 44566 88899999999999964 359999999
Q ss_pred cCCCCccCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCccccC
Q psy16052 110 CGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFCS 162 (476)
Q Consensus 110 C~~g~Ci~~~~~C~g~~dC~d~sDe~~c~~~~~~~~~~~C~~~~C~~p~C~C~ 162 (476)
|.+|+||+..++|||..||.|+|||..|....++...|.|.++.|++....|.
T Consensus 113 C~~g~Ci~~~~~CDg~~dC~dgsDE~~C~~~~C~~~~f~C~~~~Ci~~~~~Cd 165 (791)
T 3m0c_C 113 CHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWACD 165 (791)
T ss_dssp -----------------------------------------------------
T ss_pred CCCCCEECHHHcCCCcccCCCCcccccccccccccceeccCCCccccccccCC
Confidence 99999999999999999999999999999877888889999999998666665
No 23
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.16 E-value=3e-12 Score=142.33 Aligned_cols=139 Identities=22% Similarity=0.430 Sum_probs=0.0
Q ss_pred ccccCcccccccccccCCCC-CCceeeccC--C----CCCCCCCccccCCCC-----------cccccCCCCcccccccc
Q psy16052 11 EETSTKKEESFEHELCKDKD-AGEWFRLVA--G----EGDNCRDVIQCTSSG-----------LQAIRCPAGLYFDIEKQ 72 (476)
Q Consensus 11 ~~~~~~~~~~~~~~~C~~~~-~~~~~~~~~--~----~~~~C~~~~~C~~g~-----------~~~~~C~~g~~~~~~~~ 72 (476)
.++++.+||.+ ..|..+. ....|++.. + ..--|++...|.+|+ ..+|+|.+|.++.. .+
T Consensus 47 ~dC~D~sDE~~--~~C~~~~C~~~~f~C~~~~~~Ci~~~~~CDg~~dC~dgsDE~~C~~~~C~~~~f~C~~g~Ci~~-~~ 123 (791)
T 3m0c_C 47 AECQDGSDESQ--ETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDGKCISR-QF 123 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCCCcccc--cccccCccCcCccccCCCCCCEeeccccCCCCcCcCCCcccCCccCccccCCeEECCCCCEECH-HH
Confidence 34666666633 2243221 122455554 1 122366666676665 34788888876654 45
Q ss_pred cccCCcccccccccccccccCCCCCCCCCCCCCCceecCCCCccCCCcccCCCCCCCCCCCCC--CCCC--------CCC
Q psy16052 73 TCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCNGEKDCNDGSDEN--TCDS--------END 142 (476)
Q Consensus 73 ~C~~~~~~~~C~~~~de~~c~~~~~~~~~~C~~~~~~C~~g~Ci~~~~~C~g~~dC~d~sDe~--~c~~--------~~~ 142 (476)
.| +++.||.|++||..|.. ..|.+.+|+|.+|+||+..|+|||..||.|+|||. .|.. ..|
T Consensus 124 ~C---Dg~~dC~dgsDE~~C~~------~~C~~~~f~C~~~~Ci~~~~~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~~C 194 (791)
T 3m0c_C 124 VC---DSDRDCLDGSDEASCPV------LTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPC 194 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cC---CCcccCCCCcccccccc------cccccceeccCCCccccccccCCCCCcCCCCCCcccccCCCccccCCCCCCC
Confidence 66 88899999999999963 35999999999999999999999999999999996 6742 234
Q ss_pred CCCCCCCCCCcccCCcccc
Q psy16052 143 PNRAPPCDPAVCVLPDCFC 161 (476)
Q Consensus 143 ~~~~~~C~~~~C~~p~C~C 161 (476)
....+.|.++.|++....|
T Consensus 195 ~~~~f~C~~g~Ci~~~~~C 213 (791)
T 3m0c_C 195 SAFEFHCLSGECIHSSWRC 213 (791)
T ss_dssp -------------------
T ss_pred CCCcccccCCceecccccc
Confidence 5567888888888654333
No 24
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.12 E-value=3.8e-11 Score=95.16 Aligned_cols=63 Identities=25% Similarity=0.576 Sum_probs=55.6
Q ss_pred CCCCCCceecCCCCccCCCcccCCCCCCCCCCCC-CCCCCCCCC-CCCCCCCCCcccCCccccCC
Q psy16052 101 PLCQDGFLACGDGACIERGLFCNGEKDCNDGSDE-NTCDSENDP-NRAPPCDPAVCVLPDCFCSE 163 (476)
Q Consensus 101 ~~C~~~~~~C~~g~Ci~~~~~C~g~~dC~d~sDe-~~c~~~~~~-~~~~~C~~~~C~~p~C~C~~ 163 (476)
..|.+.+|+|.+|+||+..|+|||..||.|+||| ..|....+. ...|.|.++.|++....|..
T Consensus 3 ~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~~C~~~~C~~~~~f~C~~g~CI~~~~~CDG 67 (82)
T 2fyj_A 3 RTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDN 67 (82)
T ss_dssp SSSCTTEEETTSSCEEETTSSSSCSSSSCSTTTTTSSCCCSSSCSSSEEECTTSCEEETTCBSSS
T ss_pred CCCCCCceEeCCCCEEeccccCCCcccCCCccccccccccccCCCCCceECCCCCeEcHHHccCC
Confidence 3598999999999999999999999999999999 899876664 37899999999988877774
No 25
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.10 E-value=1.1e-11 Score=97.75 Aligned_cols=62 Identities=31% Similarity=0.746 Sum_probs=55.5
Q ss_pred CCCCCceecCCCCccCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCccccCC
Q psy16052 102 LCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFCSE 163 (476)
Q Consensus 102 ~C~~~~~~C~~g~Ci~~~~~C~g~~dC~d~sDe~~c~~~~~~~~~~~C~~~~C~~p~C~C~~ 163 (476)
.|++.+|+|.+|+||+..|+|||..||.|+|||.+|....++...|.|.++.|++....|..
T Consensus 2 ~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~C~~~~C~~~~f~C~~g~Ci~~~~~CDg 63 (80)
T 2fcw_B 2 TCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWACDN 63 (80)
T ss_dssp CCCTTEEECTTSCEEEGGGTTSSSCCSTTCTTTTTHHHHHCCTTEEECTTSCEEEGGGTTSS
T ss_pred CCCCCccCCCCCCEEeeecccCCcccCCCcccccccccccCCceeeECCCCCEEecccccCC
Confidence 48899999999999999999999999999999999976556667899999999998888874
No 26
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=99.01 E-value=1.3e-10 Score=77.47 Aligned_cols=36 Identities=39% Similarity=0.856 Sum_probs=34.1
Q ss_pred CCCCceecCCCCccCCCcccCCCCCCCCCCCCCCCC
Q psy16052 103 CQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCD 138 (476)
Q Consensus 103 C~~~~~~C~~g~Ci~~~~~C~g~~dC~d~sDe~~c~ 138 (476)
|.+.+|+|.+|+||+..++|||..||.|+|||.+|.
T Consensus 2 C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~C~ 37 (37)
T 1ajj_A 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCA 37 (37)
T ss_dssp CCTTCEECTTSCEECGGGTTSSSCCSTTCGGGTTCC
T ss_pred CCCCceEcCCCCeechhhccCCCCCCCCCccccCCC
Confidence 788999999999999999999999999999998873
No 27
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=98.99 E-value=8.8e-11 Score=83.80 Aligned_cols=40 Identities=38% Similarity=0.930 Sum_probs=37.0
Q ss_pred CCCCCCceecCCCCccCCCcccCCCCCCCCCCCCCCCCCC
Q psy16052 101 PLCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSE 140 (476)
Q Consensus 101 ~~C~~~~~~C~~g~Ci~~~~~C~g~~dC~d~sDe~~c~~~ 140 (476)
..|++.+|+|.+|+||++.|+|||..||.|||||..|...
T Consensus 5 ~~C~~~~F~C~nG~CIp~~~~CDG~~DC~DgSDE~~~~~~ 44 (52)
T 2m0p_A 5 ASCLDTQYTCDNHQCISKNWVCDTDNDCGDGSDEKNCNST 44 (52)
T ss_dssp CSSCSSEEECTTCCEEETTSTTSSSCSSSSCHHHHSCCCC
T ss_pred CCCCCCceECCCCCEEecCccCCCCCCCCCCCccccchhh
Confidence 4699999999999999999999999999999999988753
No 28
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=98.98 E-value=3e-10 Score=78.38 Aligned_cols=38 Identities=37% Similarity=0.994 Sum_probs=35.4
Q ss_pred CCCCCCceecCC-CCccCCCcccCCCCCCCCCCCCCCCC
Q psy16052 101 PLCQDGFLACGD-GACIERGLFCNGEKDCNDGSDENTCD 138 (476)
Q Consensus 101 ~~C~~~~~~C~~-g~Ci~~~~~C~g~~dC~d~sDe~~c~ 138 (476)
..|...+|+|.+ |+||+..|+|||..||.|+|||.+|.
T Consensus 5 ~~C~~~~f~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C~ 43 (43)
T 2jm4_A 5 VKCSLGYFPCGNITKCLPQLLHCNGVDDCGNQADEDNCG 43 (43)
T ss_dssp CSCCTTEEECSSSSCEEEGGGTTSSCCCSSSCCTTSSCC
T ss_pred CCCCCCeeECCCCCeEcCHhhccCCCCCCCCCcccCCCC
Confidence 459899999999 99999999999999999999998884
No 29
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.98 E-value=2.3e-10 Score=79.60 Aligned_cols=38 Identities=42% Similarity=0.895 Sum_probs=35.3
Q ss_pred CCCCCCceecCCCCccCCCcccCCCCCCCCCCCCCCCC
Q psy16052 101 PLCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCD 138 (476)
Q Consensus 101 ~~C~~~~~~C~~g~Ci~~~~~C~g~~dC~d~sDe~~c~ 138 (476)
+.|.+.+|+|.+|+||+..|+|||..||.|+|||..|.
T Consensus 4 ~~C~~~~F~C~~g~CI~~~~~CDG~~DC~DgSDE~~c~ 41 (45)
T 1d2l_A 4 PQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPAL 41 (45)
T ss_dssp CBTTBTCEEETTTEEECGGGTTTSSCTTTTCSTTSTTT
T ss_pred CcCCCCceEcCCCCeEehhhccCCCCCCCCCCCCCCCc
Confidence 46888999999999999999999999999999998774
No 30
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=98.94 E-value=3.5e-10 Score=78.45 Aligned_cols=38 Identities=32% Similarity=0.742 Sum_probs=34.1
Q ss_pred CCCCCCceecCCCCccCCCcccCCCCCCCCCCCCCCCC
Q psy16052 101 PLCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCD 138 (476)
Q Consensus 101 ~~C~~~~~~C~~g~Ci~~~~~C~g~~dC~d~sDe~~c~ 138 (476)
..|...+|+|.+|+||+..|+|||..||.|+|||.+|.
T Consensus 6 ~~C~~~~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~C~ 43 (44)
T 3a7q_B 6 KECEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDDCP 43 (44)
T ss_dssp --CCTTEEECTTSCEEEGGGTTSSSCCSSSSTTTSCC-
T ss_pred CCCCCCceEcCCCCEeChhhccCCCCCCCCCccccCCC
Confidence 35888999999999999999999999999999999885
No 31
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.94 E-value=6e-10 Score=76.45 Aligned_cols=37 Identities=41% Similarity=0.936 Sum_probs=34.5
Q ss_pred CCCCCceecC-CCCccCCCcccCCCCCCCCCCCCCCCC
Q psy16052 102 LCQDGFLACG-DGACIERGLFCNGEKDCNDGSDENTCD 138 (476)
Q Consensus 102 ~C~~~~~~C~-~g~Ci~~~~~C~g~~dC~d~sDe~~c~ 138 (476)
.|.+.+|+|. +|.||+..|+|||..||.|+|||.+|.
T Consensus 3 ~C~~~~F~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C~ 40 (42)
T 1cr8_A 3 GCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCE 40 (42)
T ss_dssp CSSTTCEECTTTCCEECGGGSSSSSCCSSSSTTTTTCC
T ss_pred CCCCCceEeCCCCeEcChhhcCCCCcCCCCCCcccCCC
Confidence 4889999997 599999999999999999999999886
No 32
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.89 E-value=9.4e-10 Score=74.19 Aligned_cols=36 Identities=39% Similarity=0.976 Sum_probs=33.4
Q ss_pred CCCCceecCC--CCccCCCcccCCCCCCCCCCCCCCCC
Q psy16052 103 CQDGFLACGD--GACIERGLFCNGEKDCNDGSDENTCD 138 (476)
Q Consensus 103 C~~~~~~C~~--g~Ci~~~~~C~g~~dC~d~sDe~~c~ 138 (476)
|++.+|+|.+ |+||+..|+|||..||.|+|||.+|.
T Consensus 1 C~~~~f~C~~~~g~Cip~~~~CDg~~DC~dgsDE~~C~ 38 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCG 38 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTSSSSSSCCSTTTTTSTTCC
T ss_pred CCCCceecCCCCCCEeCccccCCCcccCcCCcccccCC
Confidence 6678999987 99999999999999999999998885
No 33
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.86 E-value=1.7e-10 Score=106.69 Aligned_cols=64 Identities=22% Similarity=0.482 Sum_probs=54.5
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCceec--CCCCccCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy16052 78 GAVKNCKLKNKERKVKPLLYTDEPLCQDGFLAC--GDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPC 149 (476)
Q Consensus 78 ~~~~~C~~~~de~~c~~~~~~~~~~C~~~~~~C--~~g~Ci~~~~~C~g~~dC~d~sDe~~c~~~~~~~~~~~C 149 (476)
....+|.+++||.+|. .|++.+|+| .+|+||+..|+|||..||.|+|||.+|....+....|.|
T Consensus 38 ~~~~~c~d~sDE~~C~--------~C~~~~F~C~~~~g~CIp~~~~CDG~~DC~DgSDE~~C~~~~C~~~~F~c 103 (215)
T 2gtl_O 38 RKAGSLRHRVEELEDP--------SCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDCTLPTKAGDKFIG 103 (215)
T ss_dssp HHHHHHHHHHHHHSCC--------SSCTTEEECCSSSCCEEEGGGTTSSSCCSSSCHHHHCCCCSSCTTCEEEE
T ss_pred cccccCCcchhhccCC--------CCCCcceeeCCCCCcCccccccCCCCCcCCCcccccCCCCCCcCCCceee
Confidence 3455899999999994 399999999 799999999999999999999999999875555555555
No 34
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.85 E-value=9.9e-10 Score=77.33 Aligned_cols=38 Identities=37% Similarity=0.957 Sum_probs=34.6
Q ss_pred CCCCCCceecC-----CCCccCCCcccCCCCCCCCCCCCCCCC
Q psy16052 101 PLCQDGFLACG-----DGACIERGLFCNGEKDCNDGSDENTCD 138 (476)
Q Consensus 101 ~~C~~~~~~C~-----~g~Ci~~~~~C~g~~dC~d~sDe~~c~ 138 (476)
..|.+.+|+|. +|+||+..|+|||..||.|+|||.+|.
T Consensus 5 ~~C~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~DgSDE~~C~ 47 (47)
T 1k7b_A 5 GSCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG 47 (47)
T ss_dssp -CCSTTEECCSSCTTSCCCCEEGGGSSCSSCCSSSSTTTGGGC
T ss_pred CCCCCCceEcCCCCCCCCcCCCccccCCCcCCCCCCcccCCCC
Confidence 35889999998 899999999999999999999999884
No 35
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=98.82 E-value=9.3e-10 Score=76.27 Aligned_cols=37 Identities=35% Similarity=0.799 Sum_probs=34.4
Q ss_pred CCCCCCceecCCCCccCCCcccCCCCCCCCCCCCCCC
Q psy16052 101 PLCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTC 137 (476)
Q Consensus 101 ~~C~~~~~~C~~g~Ci~~~~~C~g~~dC~d~sDe~~c 137 (476)
..|++.+|+|.+|+||+..|+|||..||.|+|||..|
T Consensus 3 ~~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~~ 39 (44)
T 1j8e_A 3 HSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHA 39 (44)
T ss_dssp SSSCTTEEECTTSCEEEGGGTTSSSCCSSSSGGGSHH
T ss_pred CCCCCCceEeCCCCeEecCcccCCCCCCCCCCCCCCc
Confidence 3588999999999999999999999999999999765
No 36
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=98.82 E-value=1.5e-09 Score=77.15 Aligned_cols=38 Identities=34% Similarity=0.907 Sum_probs=35.1
Q ss_pred CCCCCCceec-CCCCccCCCcccCCCCCCCCCCCCCCCC
Q psy16052 101 PLCQDGFLAC-GDGACIERGLFCNGEKDCNDGSDENTCD 138 (476)
Q Consensus 101 ~~C~~~~~~C-~~g~Ci~~~~~C~g~~dC~d~sDe~~c~ 138 (476)
..|.+.+|+| .+|+||+..|+|||..||.|||||..|.
T Consensus 5 ~~C~~~~F~C~~~g~CI~~~~~CDG~~DC~DgSDE~~C~ 43 (50)
T 2knx_A 5 KTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAA 43 (50)
T ss_dssp CTTCTTEEEETTTTEEEETTTTTSSSCCSTTCGGGSGGG
T ss_pred CCCCCCcEEcCCCCeEcChhhcCCCCCCCCCCCcccccc
Confidence 4598999999 5999999999999999999999998875
No 37
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.80 E-value=1.3e-09 Score=77.11 Aligned_cols=38 Identities=39% Similarity=0.913 Sum_probs=35.6
Q ss_pred CCCCCceecCCC-CccCCCcccCCCCCCCCCCCCCCCCC
Q psy16052 102 LCQDGFLACGDG-ACIERGLFCNGEKDCNDGSDENTCDS 139 (476)
Q Consensus 102 ~C~~~~~~C~~g-~Ci~~~~~C~g~~dC~d~sDe~~c~~ 139 (476)
.|.+.+|+|.+| +||+..|+|||..||.|+|||.+|..
T Consensus 6 ~C~~~~F~C~~g~~CI~~~~~CDG~~DC~DgSDE~~C~~ 44 (48)
T 2i1p_A 6 NCTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAGCPT 44 (48)
T ss_dssp CCCSSSEECSSSSCEECGGGSSSSSCCSSSSHHHHSSCS
T ss_pred CCCCCeeECCCCCEeCCHhhcCCCCCCCCCCcccccCCC
Confidence 488899999999 89999999999999999999999874
No 38
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.74 E-value=2.7e-09 Score=75.13 Aligned_cols=38 Identities=37% Similarity=0.974 Sum_probs=35.0
Q ss_pred CCCCCCceecC-----CCCccCCCcccCCCCCCCCCCCCCCCC
Q psy16052 101 PLCQDGFLACG-----DGACIERGLFCNGEKDCNDGSDENTCD 138 (476)
Q Consensus 101 ~~C~~~~~~C~-----~g~Ci~~~~~C~g~~dC~d~sDe~~c~ 138 (476)
..|.+.+|+|. +|.||+..|+|||..||.|+|||.+|.
T Consensus 3 ~~C~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC~DgSDE~~C~ 45 (47)
T 1jrf_A 3 SRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG 45 (47)
T ss_dssp CCCCCCCSCSSSCSCCCTTTSGGGGSSSSSCCSSSSCTTHHHH
T ss_pred CCCCCCeeECCCCCCCCCeEcCHhhcCCCCcCCCCCcccccCC
Confidence 35889999998 799999999999999999999998885
No 39
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=98.64 E-value=5.2e-09 Score=82.13 Aligned_cols=37 Identities=32% Similarity=0.861 Sum_probs=33.7
Q ss_pred CCCCCCceecC-CCCccCCCcccCCCCCCCCCCCCCCC
Q psy16052 101 PLCQDGFLACG-DGACIERGLFCNGEKDCNDGSDENTC 137 (476)
Q Consensus 101 ~~C~~~~~~C~-~g~Ci~~~~~C~g~~dC~d~sDe~~c 137 (476)
..|.+.+|+|. +|+||+..|+|||..||.|||||..|
T Consensus 7 ~~C~~~~f~C~~~g~CIp~~~~CDg~~DC~DgsDE~~~ 44 (80)
T 2kny_A 7 KTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIA 44 (80)
T ss_dssp CCCSSSEEECTTSSCEEEHHHHTTSSCCSSSSTTTSGG
T ss_pred CCCCCCceecCCCCeEcChhhcCCCCCCCCCCCccccc
Confidence 35989999997 79999999999999999999999854
No 40
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.58 E-value=9e-09 Score=109.29 Aligned_cols=102 Identities=24% Similarity=0.448 Sum_probs=66.8
Q ss_pred ccccccc-ccccccCCCCC-CCCCCCCCCceecC-CCCccCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccC
Q psy16052 80 VKNCKLK-NKERKVKPLLY-TDEPLCQDGFLACG-DGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVL 156 (476)
Q Consensus 80 ~~~C~~~-~de~~c~~~~~-~~~~~C~~~~~~C~-~g~Ci~~~~~C~g~~dC~d~sDe~~c~~~~~~~~~~~C~~~~C~~ 156 (476)
.+.|... .+++.|.+... .++..| .+|+|. +|+||+..|+|||+.||.|+|||.+|.... ..|+.
T Consensus 43 G~~C~~~l~d~~~C~~~~~C~~~~~c--~~f~C~~~g~Ci~~~~~Cdg~~dC~d~sdE~~c~~~~-----~~C~~----- 110 (537)
T 3ojy_B 43 GEPCNFSDKEVEDCVTNRPCRSQVRC--EGFVCAQTGRCVNRRLLCNGDNDCGDQSDEANCRRIY-----KKCQH----- 110 (537)
T ss_dssp CCCCCSCSEEEEECCCCCCCCCCSCC--SSEECTTTCCEECGGGTTSSSCCSSSSCTTSSCSSCS-----SCCSS-----
T ss_pred CCcCccchhhhccCCCccccccCCCC--CccCcCCCCcEeeccccCCCCCCCCCccccccCCCCC-----Ccccc-----
Confidence 3344432 45555644210 123457 799999 999999999999999999999999998532 34543
Q ss_pred CccccCCCCCCCC-CCCCCCCCCCeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCc
Q psy16052 157 PDCFCSEDGTYIP-GDLPSKEVPQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDI 213 (476)
Q Consensus 157 p~C~C~~~~~~iP-~~l~~~~~Pq~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i 213 (476)
+ ..+| +...++ .|++..+.+....+|+. ++..+.|..
T Consensus 111 -------~-~~~~~~~~l~G-----------~G~dilt~~~~g~vlD~-~~~~G~C~~ 148 (537)
T 3ojy_B 111 -------E-MDQYWGIGSLA-----------SGINLFTNSFEGPVLDH-RYYAGGCSP 148 (537)
T ss_dssp -------C-CBCCTTGGGGG-----------EEECTTTCCEEEECBCT-TCCCSCCEE
T ss_pred -------C-cCCCccceecc-----------eeEEEecCccccceecc-cccCCccce
Confidence 2 3334 555566 57777776666667765 554455643
No 41
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.58 E-value=6e-09 Score=110.81 Aligned_cols=107 Identities=22% Similarity=0.433 Sum_probs=71.9
Q ss_pred ccccccc-ccccccCCCCC-CCCCCCCCCceecC-CCCccCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccC
Q psy16052 80 VKNCKLK-NKERKVKPLLY-TDEPLCQDGFLACG-DGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVL 156 (476)
Q Consensus 80 ~~~C~~~-~de~~c~~~~~-~~~~~C~~~~~~C~-~g~Ci~~~~~C~g~~dC~d~sDe~~c~~~~~~~~~~~C~~~~C~~ 156 (476)
.+.|... .+++.|.+... ..+..|+ .+|+|. +|+||+..|+|||+.||.|+|||.+|..... ....|..
T Consensus 41 G~~C~~~l~d~~~C~~~~~c~~~~~c~-~~f~C~~~g~Ci~~~~~Cdg~~dC~d~sDE~~C~~~~~--~~~~C~~----- 112 (554)
T 3ojy_A 41 GTICSGDIWDQASCSSSTTCVRQAQCG-QDFQCKETGRCLKRHLVCNGDQDCLDGSDEDDCEDVRA--IDEDCSQ----- 112 (554)
T ss_dssp CCCCCSCSEEEEECCCCCCC--CCCCS-SSEECSSSCCEECGGGTTSSSCCSSSCTTSSSCCSCCC--CCTTTTT-----
T ss_pred CCCCCCccccccCCCCCCCCcccCCCC-CcCccCCCCEEcccccccCCcccCCCccccccCCCCCC--Ccccccc-----
Confidence 3445543 45555643211 1234584 899999 9999999999999999999999999985321 1234442
Q ss_pred CccccCCCCCCCCCCCCCCCCCCeEEEeecCCCCCccHHHHHHHHhccCCCCCCCCce
Q psy16052 157 PDCFCSEDGTYIPGDLPSKEVPQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDIK 214 (476)
Q Consensus 157 p~C~C~~~~~~iP~~l~~~~~Pq~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~ 214 (476)
...+|+....+ .|++..+.++...+|+. +++.+.|...
T Consensus 113 --------~~~iPg~~l~g-----------~G~nilt~~~~g~vld~-~~~~G~C~~v 150 (554)
T 3ojy_A 113 --------YEPIPGSQKAA-----------LGYNILTQEDAQSVYDA-SYYGGQCETV 150 (554)
T ss_dssp --------SCBCTTHHHHT-----------EEEETTTTEEEEESBCT-TCCTTCCEEE
T ss_pred --------ccccCcccccc-----------cCEEeccCccccccccc-cccCCeeeEe
Confidence 35667766666 57777777766678876 5566667653
No 42
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=98.56 E-value=5.1e-08 Score=104.49 Aligned_cols=83 Identities=29% Similarity=0.615 Sum_probs=65.8
Q ss_pred CCCccccCCCC-----cccccCCCCcccccccccccCCcccccccccccccccCCCCCCCCCCCCCCceecCCCCccCCC
Q psy16052 45 CRDVIQCTSSG-----LQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERG 119 (476)
Q Consensus 45 C~~~~~C~~g~-----~~~~~C~~g~~~~~~~~~C~~~~~~~~C~~~~de~~c~~~~~~~~~~C~~~~~~C~~g~Ci~~~ 119 (476)
|+....|.+.. ..+|+|.+|.++. ..+.| |++.||.|++||..|.. |++.+|+|.++.||+..
T Consensus 190 ~DagV~C~~~~~~c~~~~~~~C~~~~ci~-~~~~C---dg~~dC~d~sDE~~C~~--------c~~~~~~C~~~~C~~~~ 257 (565)
T 2xrc_A 190 DFADVVCYTQKADSPMDDFFQCVNGKYIS-QMKAC---DGINDCGDQSDELCCKA--------CQGKGFHCKSGVCIPSQ 257 (565)
T ss_dssp CCCEEEBCCC---------CBCTTSCBCC-TTSTT---SSSCCSSSSSSSSSBSS--------CSSSCEEETTTEEECGG
T ss_pred cCCceeccccccCCCCcCeeECCCCCccC-HHHcC---CCcccCCCCcccccccc--------cCCCceecCCCcccCcc
Confidence 45556666554 2359998887664 45677 88889999999999952 88889999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCC
Q psy16052 120 LFCNGEKDCNDGSDENTCDS 139 (476)
Q Consensus 120 ~~C~g~~dC~d~sDe~~c~~ 139 (476)
++|||..||.|+|||.+|..
T Consensus 258 ~~cdG~~dC~~gsDE~~C~~ 277 (565)
T 2xrc_A 258 YQCNGEVDCITGEDEVGCAG 277 (565)
T ss_dssp GTTSSSCCSSSCTTSSSCC-
T ss_pred ccCCCcccCCCCccccCcCC
Confidence 99999999999999998875
No 43
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=98.40 E-value=1.3e-07 Score=101.41 Aligned_cols=96 Identities=24% Similarity=0.476 Sum_probs=63.6
Q ss_pred cccCCCCcccccCCCCcccccccccccCC-cccccccccccccccCCCCCCCCCCCCCCceecCCCCccCCCcccCCCCC
Q psy16052 49 IQCTSSGLQAIRCPAGLYFDIEKQTCDWK-GAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCNGEKD 127 (476)
Q Consensus 49 ~~C~~g~~~~~~C~~g~~~~~~~~~C~~~-~~~~~C~~~~de~~c~~~~~~~~~~C~~~~~~C~~g~Ci~~~~~C~g~~d 127 (476)
.+|.......+.|+.+... .|.+. +....|.+.+++ | |...+|+|.+|.||+..++|||..|
T Consensus 166 v~C~G~E~sl~~C~~~~~~-----~~~h~~DagV~C~~~~~~--c----------~~~~~~~C~~~~ci~~~~~Cdg~~d 228 (565)
T 2xrc_A 166 VHCRGLETSLAECTFTKRR-----TMGYQDFADVVCYTQKAD--S----------PMDDFFQCVNGKYISQMKACDGIND 228 (565)
T ss_dssp EECCSCCSCGGGSEEECCC-----CCSSCCCCEEEBCCC---------------------CBCTTSCBCCTTSTTSSSCC
T ss_pred eEeCCccCchhhcccCccc-----ccccccCCceeccccccC--C----------CCcCeeECCCCCccCHHHcCCCccc
Confidence 4555444556666654322 22222 444456544311 1 3355699999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCcccCCccccCC
Q psy16052 128 CNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFCSE 163 (476)
Q Consensus 128 C~d~sDe~~c~~~~~~~~~~~C~~~~C~~p~C~C~~ 163 (476)
|.|+|||..|.. |+...+.|.++.|.++.-.|..
T Consensus 229 C~d~sDE~~C~~--c~~~~~~C~~~~C~~~~~~cdG 262 (565)
T 2xrc_A 229 CGDQSDELCCKA--CQGKGFHCKSGVCIPSQYQCNG 262 (565)
T ss_dssp SSSSSSSSSBSS--CSSSCEEETTTEEECGGGTTSS
T ss_pred CCCCcccccccc--cCCCceecCCCcccCccccCCC
Confidence 999999999975 6667889999999987666653
No 44
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.32 E-value=1.2e-07 Score=87.02 Aligned_cols=40 Identities=38% Similarity=0.979 Sum_probs=35.6
Q ss_pred CCCCCCceecC--CCCccCCCcccCCCCCCCCCCCCC--CCCCC
Q psy16052 101 PLCQDGFLACG--DGACIERGLFCNGEKDCNDGSDEN--TCDSE 140 (476)
Q Consensus 101 ~~C~~~~~~C~--~g~Ci~~~~~C~g~~dC~d~sDe~--~c~~~ 140 (476)
..|+..+|+|. +|.||+..|+|||..||.|||||. +|...
T Consensus 51 ~~C~~~eFqC~~~~g~CIp~~wvCDG~~DC~DGSDE~~~~C~~~ 94 (220)
T 2gtl_N 51 THCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVCDTS 94 (220)
T ss_dssp CSSCTTEEECCSSSCCEEETTTTTSSSCCSTTCTTSCGGGGCGG
T ss_pred CCCCCCccCcCCCCCcEeCcceecCCCCCCCCCCccCcccCCCC
Confidence 35888999994 699999999999999999999996 88764
No 45
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.31 E-value=1.5e-07 Score=87.13 Aligned_cols=40 Identities=48% Similarity=0.973 Sum_probs=35.8
Q ss_pred CCCCCCceecCC--CCccCCCcccCCCCCCCCCCCCC--CCCCC
Q psy16052 101 PLCQDGFLACGD--GACIERGLFCNGEKDCNDGSDEN--TCDSE 140 (476)
Q Consensus 101 ~~C~~~~~~C~~--g~Ci~~~~~C~g~~dC~d~sDe~--~c~~~ 140 (476)
..|++.+|+|.+ |+||+..|+|||..||.|||||. .|...
T Consensus 52 ~~C~~~~F~C~~~~g~CI~~~~~CDG~~DC~DgSDE~~~~C~~~ 95 (217)
T 2gtl_M 52 HHCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCSLN 95 (217)
T ss_dssp CCCCTTEEECSSSSCCEEEGGGTTSSSCCSSSSTTTSHHHHCCG
T ss_pred CCCCCCceecCCCCCcEechhhccCCCCCCCCCCccccCcCCCC
Confidence 469999999965 99999999999999999999998 78753
No 46
>1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus tridentatus} SCOP: g.31.1.1
Probab=98.19 E-value=6.7e-07 Score=69.15 Aligned_cols=58 Identities=24% Similarity=0.484 Sum_probs=48.9
Q ss_pred ccccCCCCCCceeeccCCCCCCCCCccccCCCCcccccCCCCcccccccccccCCccccccccccc
Q psy16052 23 HELCKDKDAGEWFRLVAGEGDNCRDVIQCTSSGLQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNK 88 (476)
Q Consensus 23 ~~~C~~~~~~~~~~~~~~~~~~C~~~~~C~~g~~~~~~C~~g~~~~~~~~~C~~~~~~~~C~~~~d 88 (476)
...|.. +.+|+++. +|++||+|.+|...++.||.|+.|+...+.|+|+.+++ |...+.
T Consensus 9 ~~~C~~---~G~~~~p~----dC~~fy~C~~G~~~~~~Cp~Gl~Fn~~~~~Cd~p~~v~-C~~~~~ 66 (74)
T 1dqc_A 9 YSPCLD---DGPNVNLY----SCCSFYNCHKCLARLENCPKGLHYNAYLKVCDWPSKAG-CTSVNK 66 (74)
T ss_dssp GCCSSS---SEEECCSS----CSSEEEEEETTEEEEEECTTSCEEETTTTEEECTTTTT-CCSSCC
T ss_pred CCcCCC---CCEeCCcc----cCcceeECCCCcEEEeECcCCCEEChhhCcCcCcccCC-CCCCCC
Confidence 344875 34888888 89999999999999999999999999999999988775 776543
No 47
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=97.95 E-value=1.1e-06 Score=99.11 Aligned_cols=73 Identities=30% Similarity=0.549 Sum_probs=53.3
Q ss_pred CCCCCceecCCCCccCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCCCCCCCCCCCCCeE
Q psy16052 102 LCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFCSEDGTYIPGDLPSKEVPQMI 181 (476)
Q Consensus 102 ~C~~~~~~C~~g~Ci~~~~~C~g~~dC~d~sDe~~c~~~~~~~~~~~C~~~~C~~p~C~C~~~~~~iP~~l~~~~~Pq~V 181 (476)
.|+ ..|+|.+|+||+..|+|||+.||.|+|||.+|... ...|. .....|||...++
T Consensus 118 ~C~-~~F~C~~g~ci~~~~~c~g~~dC~d~sde~~C~~~-----~~~C~------------~~~~~iPg~~l~G------ 173 (913)
T 3t5o_A 118 DCK-NKFRCDSGRCIARKLECNGENDCGDNSDERDCGRT-----KAVCT------------RKYNPIPSVQLMG------ 173 (913)
T ss_dssp CCS-SEEECTTSCEEEGGGSSSSSCCSSSSGGGTTCSSC-----CCSSS------------SCCEECTTGGGGG------
T ss_pred Ccc-cccccCCCceEccceecCCcccCCCccccccCCCC-----CCccc------------ccccccchhhhhc------
Confidence 573 78999999999999999999999999999999842 12343 2235678777776
Q ss_pred EEeecCCCCCccHHHHHHHHhc
Q psy16052 182 TITFDDAINNNNIALYKEMFNG 203 (476)
Q Consensus 182 ~lTFDdg~~~~~~~~~l~ll~~ 203 (476)
.|++..+.+....+|+.
T Consensus 174 -----~G~dilt~~~~g~vlD~ 190 (913)
T 3t5o_A 174 -----NGFHFLAGEPRGEVLDN 190 (913)
T ss_dssp -----EEEETTTTEEEEECBCS
T ss_pred -----CcEEeecCccccccccc
Confidence 45555555444455654
No 48
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=97.60 E-value=0.00043 Score=75.00 Aligned_cols=100 Identities=13% Similarity=0.138 Sum_probs=79.7
Q ss_pred HHHHHHHhccCCCCCCC-CceEEEEecccC--------CC-hHHHHHHHHcCC-eeeeCCCCCCCCccccCCCCHHHHHH
Q psy16052 195 ALYKEMFNGKRKNPNGC-DIKATFFVSHKY--------TN-YSAVQELHRKGH-EVAVHSITHNDDENFWSNATVDDWAK 263 (476)
Q Consensus 195 ~~~l~ll~~~~~np~~c-~i~aTFFv~~~~--------~~-~~~v~~l~~~GH-EIg~Hs~~H~~~~~~~~~~s~e~~~~ 263 (476)
..+++++++ + +++.||.+++.. ++ ++.++++.+.|+ ||..++|+|...+ -.+.+++++
T Consensus 32 ~pll~ll~~-------~~~~k~~~~~s~~ll~~l~~~~p~l~~~ik~l~~~G~vE~l~~~~~Hpi~~----l~p~e~~~~ 100 (659)
T 1k1x_A 32 RPFMEILEE-------FPEMKVNVHFSGPLLEWIEENKPDYLDLLRSLIKRGQLEIVVAGFYEPVLA----AIPKEDRLV 100 (659)
T ss_dssp HHHHHHHTT-------CTTCCEEEEECHHHHHHHHHHCHHHHHHHHHHHHTTCEEEEBCCTTCCCGG----GSCHHHHHH
T ss_pred HHHHHHHHh-------CCCcEEEEEccHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEccCccccccc----CCCHHHHHH
Confidence 346677766 4 489999998742 11 267889999995 9999999998753 357789999
Q ss_pred HHHHHHHHHHHhhcccCCcccEEecCCcccCchHHHHHHHHcCCeEe
Q psy16052 264 EMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYD 310 (476)
Q Consensus 264 ei~~~~~~l~~~~~i~g~~~~gfR~P~l~~~~~~~~~~l~~~G~~Yd 310 (476)
+|...++.++ ..|..++||..|-..++.. ..++|++.|+.|-
T Consensus 101 QI~~g~~~~~----~FG~~P~G~WlPE~~ys~~-l~~iL~~~Gi~y~ 142 (659)
T 1k1x_A 101 QIEMLKDYAR----KLGYDAKGVWLTERVWQPE-LVKSLREAGIEYV 142 (659)
T ss_dssp HHHHHHHHHH----HTTCCCCEEECGGGCBCTT-HHHHHHHTTCCEE
T ss_pred HHHHHHHHHH----HcCCCCCEEECcccccChh-HHHHHHHcCCcEE
Confidence 9988777666 5578999999999998886 8999999999874
No 49
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=97.29 E-value=8.3e-05 Score=58.08 Aligned_cols=68 Identities=13% Similarity=0.141 Sum_probs=50.0
Q ss_pred CCCCccccCCCCcccccCC-CCcccccccccccCCcccccccccccccc---cCCCCCCCCCCCCCCceecCC--CCccC
Q psy16052 44 NCRDVIQCTSSGLQAIRCP-AGLYFDIEKQTCDWKGAVKNCKLKNKERK---VKPLLYTDEPLCQDGFLACGD--GACIE 117 (476)
Q Consensus 44 ~C~~~~~C~~g~~~~~~C~-~g~~~~~~~~~C~~~~~~~~C~~~~de~~---c~~~~~~~~~~C~~~~~~C~~--g~Ci~ 117 (476)
+|. ...|. ..+|+|. +|.++. ..+.| |++.||.|+|||.. |.+ ..+|.+.+|+|.+ +.||+
T Consensus 3 ~C~-~~~C~---~~~f~C~~~g~CIp-~~~~C---Dg~~DC~DgsDE~~~~~C~~-----~~~C~~~~f~c~~~~~~ci~ 69 (80)
T 2kny_A 3 KLE-GKTCG---PSSFSCPGTHVCVP-ERWLC---DGDKDCADGADESIAAGCLY-----NSTGSGSGSGSTEELRVRLA 69 (80)
T ss_dssp SCS-SCCCS---SSEEECTTSSCEEE-HHHHT---TSSCCSSSSTTTSGGGTCSS-----SSTTTTCSSCHHHHHHHHTT
T ss_pred CCC-CCCCC---CCceecCCCCeEcC-hhhcC---CCCCCCCCCCccccccCCCC-----CcccCcccchhhhHHHHHHH
Confidence 454 23464 4589998 565554 56777 88899999999985 532 2469999999988 89999
Q ss_pred CCcccCC
Q psy16052 118 RGLFCNG 124 (476)
Q Consensus 118 ~~~~C~g 124 (476)
..+.+..
T Consensus 70 ~~~~gLr 76 (80)
T 2kny_A 70 SHLRKLR 76 (80)
T ss_dssp TTTTTTS
T ss_pred HHHHHHH
Confidence 8776543
No 50
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Probab=96.70 E-value=0.00026 Score=73.47 Aligned_cols=50 Identities=24% Similarity=0.612 Sum_probs=0.0
Q ss_pred ccccCCCCCCceeeccCCCCCCCCCccccCCCCcccccCCCCcccccccccccCC
Q psy16052 23 HELCKDKDAGEWFRLVAGEGDNCRDVIQCTSSGLQAIRCPAGLYFDIEKQTCDWK 77 (476)
Q Consensus 23 ~~~C~~~~~~~~~~~~~~~~~~C~~~~~C~~g~~~~~~C~~g~~~~~~~~~C~~~ 77 (476)
...|.+++.| +|+++. +|+.||+|.+|....+.||.|+.|+...+.|+|+
T Consensus 396 ~~~C~~~~~G-~~~~p~----~C~~fy~C~~g~~~~~~Cp~Gl~f~~~~~~Cd~p 445 (445)
T 1wb0_A 396 DTFCQGKADG-LYPNPR----ERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTWN 445 (445)
T ss_dssp -------------------------------------------------------
T ss_pred CCcCCCCCCc-ccCCCC----CCCcccCCCCCCEEeCCCcCCCEECcccCCCCCC
Confidence 3459998766 899998 8999999999999999999999999999999884
No 51
>2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4
Probab=96.69 E-value=0.078 Score=55.80 Aligned_cols=79 Identities=9% Similarity=-0.036 Sum_probs=66.8
Q ss_pred HHHHHHHHcCC-eeeeCCCCCCCCccccCCCCHHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcccCchHHHHHHHHc
Q psy16052 227 SAVQELHRKGH-EVAVHSITHNDDENFWSNATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQ 305 (476)
Q Consensus 227 ~~v~~l~~~GH-EIg~Hs~~H~~~~~~~~~~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~~~~~~~~~~l~~~ 305 (476)
...+++.+.|. ||-.-+++|..++-+ ....++.+.+|..+.+.++ ...|..|+||..|-..++.. +.++|++.
T Consensus 126 ~~~r~L~~~G~vEll~~~y~H~ilPLl--~d~~ed~~~QI~~g~~~~~---~~FG~~P~G~WlpE~a~~~~-l~~~l~~~ 199 (528)
T 2b5d_X 126 EGFKKYQETGKLEIVTCNATHAFLPLY--QMYPEVVNAQITVGVKNYE---KHMKKHPRGIWLAECGYYQG-LDLYLAQN 199 (528)
T ss_dssp HHHHHHHHHTSEEEEEECTTCBCGGGG--TTCHHHHHHHHHHHHHHHH---HHHSSCCSEEECGGGCBCTT-HHHHHHHT
T ss_pred HHHHHHHHCCCEEEEcCchhhHHHHhc--CCCHHHHHHHHHHHHHHHH---HHhCCCCCEEECchhccChh-HHHHHHHc
Confidence 45688889997 999999999987532 1127899999999999888 47789999999999999987 99999999
Q ss_pred CCeEee
Q psy16052 306 AFLYDS 311 (476)
Q Consensus 306 G~~Yds 311 (476)
|+.|--
T Consensus 200 Gi~y~i 205 (528)
T 2b5d_X 200 NVEYFF 205 (528)
T ss_dssp TCCEEE
T ss_pred CCeEEE
Confidence 998843
No 52
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=96.22 E-value=0.0021 Score=42.17 Aligned_cols=33 Identities=21% Similarity=0.412 Sum_probs=27.1
Q ss_pred cccccCCCCcccccccccccCCccccccccccccccc
Q psy16052 56 LQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKV 92 (476)
Q Consensus 56 ~~~~~C~~g~~~~~~~~~C~~~~~~~~C~~~~de~~c 92 (476)
..+|+|.+|.++. ..+.| +++.+|.++|||..|
T Consensus 4 ~~~f~C~~g~Ci~-~~~~C---Dg~~DC~DgsDE~~C 36 (37)
T 1ajj_A 4 AFEFHCLSGECIH-SSWRC---DGGPDCKDKSDEENC 36 (37)
T ss_dssp TTCEECTTSCEEC-GGGTT---SSSCCSTTCGGGTTC
T ss_pred CCceEcCCCCeec-hhhcc---CCCCCCCCCccccCC
Confidence 4589999987665 45677 889999999999877
No 53
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=96.15 E-value=0.002 Score=59.54 Aligned_cols=71 Identities=13% Similarity=0.204 Sum_probs=50.9
Q ss_pred CCCCCCCccccCCCCcccccC--CCCcccccccccccCCcccccccccccccccCCCCCCCCCCCCCCceecCCCCccCC
Q psy16052 41 EGDNCRDVIQCTSSGLQAIRC--PAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIER 118 (476)
Q Consensus 41 ~~~~C~~~~~C~~g~~~~~~C--~~g~~~~~~~~~C~~~~~~~~C~~~~de~~c~~~~~~~~~~C~~~~~~C~~g~Ci~~ 118 (476)
|+.+|. .|. ..+|+| .+|.|+. ..+.| ++.++|.++|||.+|.. +.|.+.+|+|. +
T Consensus 48 DE~~C~---~C~---~~~F~C~~~~g~CIp-~~~~C---DG~~DC~DgSDE~~C~~------~~C~~~~F~c~-----~- 105 (215)
T 2gtl_O 48 EELEDP---SCD---EHEHQCGGDDPQCIS-KLFVC---DGHNDCRNGEDEKDCTL------PTKAGDKFIGD-----V- 105 (215)
T ss_dssp HHHSCC---SSC---TTEEECCSSSCCEEE-GGGTT---SSSCCSSSCHHHHCCCC------SSCTTCEEEEE-----E-
T ss_pred hhccCC---CCC---CcceeeCCCCCcCcc-ccccC---CCCCcCCCcccccCCCC------CCcCCCceeee-----E-
Confidence 344573 364 568999 6787665 45677 88899999999999964 36999999982 1
Q ss_pred CcccCCCCCCCCCCCCCCCC
Q psy16052 119 GLFCNGEKDCNDGSDENTCD 138 (476)
Q Consensus 119 ~~~C~g~~dC~d~sDe~~c~ 138 (476)
++. .|.+.+++..|.
T Consensus 106 ----~~~-~C~~~~~~~~c~ 120 (215)
T 2gtl_O 106 ----CFD-HCTKRRPEHMTL 120 (215)
T ss_dssp ----EEE-SSCSSCCSEEEE
T ss_pred ----CCC-cccCCCCCCcee
Confidence 223 377888887664
No 54
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=96.02 E-value=0.0026 Score=44.39 Aligned_cols=35 Identities=17% Similarity=0.480 Sum_probs=28.3
Q ss_pred cccccCCCC-cccccccccccCCcccccccccccccccCC
Q psy16052 56 LQAIRCPAG-LYFDIEKQTCDWKGAVKNCKLKNKERKVKP 94 (476)
Q Consensus 56 ~~~~~C~~g-~~~~~~~~~C~~~~~~~~C~~~~de~~c~~ 94 (476)
..+|+|.+| .++. ..+.| +++.||.|+|||..|..
T Consensus 9 ~~~F~C~~g~~CI~-~~~~C---DG~~DC~DgSDE~~C~~ 44 (48)
T 2i1p_A 9 SAQFKCADGSSCIN-SRYRC---DGVYDCRDNSDEAGCPT 44 (48)
T ss_dssp SSSEECSSSSCEEC-GGGSS---SSSCCSSSSHHHHSSCS
T ss_pred CCeeECCCCCEeCC-HhhcC---CCCCCCCCCcccccCCC
Confidence 568999998 5554 56777 88899999999998853
No 55
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=95.91 E-value=0.0048 Score=41.68 Aligned_cols=34 Identities=18% Similarity=0.448 Sum_probs=26.8
Q ss_pred cccccCCC-CcccccccccccCCcccccccccccccccC
Q psy16052 56 LQAIRCPA-GLYFDIEKQTCDWKGAVKNCKLKNKERKVK 93 (476)
Q Consensus 56 ~~~~~C~~-g~~~~~~~~~C~~~~~~~~C~~~~de~~c~ 93 (476)
..+|+|.. |.++. ..+.| +++.+|.|+|||..|.
T Consensus 6 ~~~F~C~~~g~CI~-~~~~C---Dg~~DC~DgSDE~~C~ 40 (42)
T 1cr8_A 6 TDEFQCRLDGLCIP-LRWRC---DGDTDCMDSSDEKSCE 40 (42)
T ss_dssp TTCEECTTTCCEEC-GGGSS---SSSCCSSSSTTTTTCC
T ss_pred CCceEeCCCCeEcC-hhhcC---CCCcCCCCCCcccCCC
Confidence 45899984 76654 46777 8889999999999874
No 56
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=95.58 E-value=0.0053 Score=41.94 Aligned_cols=34 Identities=12% Similarity=0.255 Sum_probs=27.1
Q ss_pred cccccCCCCcccccccccccCCcccccccccccccccC
Q psy16052 56 LQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVK 93 (476)
Q Consensus 56 ~~~~~C~~g~~~~~~~~~C~~~~~~~~C~~~~de~~c~ 93 (476)
..+|+|.+|.++. ..+.| +++.+|.|+|||..|.
T Consensus 10 ~~~f~C~~g~CI~-~~~~C---Dg~~DC~DgSDE~~C~ 43 (44)
T 3a7q_B 10 KDQFQCRNERCIP-SVWRC---DEDDDCLDHSDEDDCP 43 (44)
T ss_dssp TTEEECTTSCEEE-GGGTT---SSSCCSSSSTTTSCC-
T ss_pred CCceEcCCCCEeC-hhhcc---CCCCCCCCCccccCCC
Confidence 4589999987665 45677 8899999999999873
No 57
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=95.56 E-value=0.0053 Score=41.69 Aligned_cols=33 Identities=18% Similarity=0.380 Sum_probs=26.6
Q ss_pred cccccCCC-CcccccccccccCCccccccccccccccc
Q psy16052 56 LQAIRCPA-GLYFDIEKQTCDWKGAVKNCKLKNKERKV 92 (476)
Q Consensus 56 ~~~~~C~~-g~~~~~~~~~C~~~~~~~~C~~~~de~~c 92 (476)
..+|+|.+ |.++. ..+.| +++.||.|+|||..|
T Consensus 9 ~~~f~C~~~g~CI~-~~~~C---Dg~~DC~DgSDE~~C 42 (43)
T 2jm4_A 9 LGYFPCGNITKCLP-QLLHC---NGVDDCGNQADEDNC 42 (43)
T ss_dssp TTEEECSSSSCEEE-GGGTT---SSCCCSSSCCTTSSC
T ss_pred CCeeECCCCCeEcC-Hhhcc---CCCCCCCCCcccCCC
Confidence 45799998 76665 46677 899999999999977
No 58
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=95.52 E-value=0.0042 Score=43.98 Aligned_cols=35 Identities=11% Similarity=0.287 Sum_probs=28.6
Q ss_pred cccccCCCCcccccccccccCCcccccccccccccccCC
Q psy16052 56 LQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKP 94 (476)
Q Consensus 56 ~~~~~C~~g~~~~~~~~~C~~~~~~~~C~~~~de~~c~~ 94 (476)
..+|+|.+|.++. ..+.| +++.||.|+|||..|..
T Consensus 9 ~~~F~C~nG~CIp-~~~~C---DG~~DC~DgSDE~~~~~ 43 (52)
T 2m0p_A 9 DTQYTCDNHQCIS-KNWVC---DTDNDCGDGSDEKNCNS 43 (52)
T ss_dssp SSEEECTTCCEEE-TTSTT---SSSCSSSSCHHHHSCCC
T ss_pred CCceECCCCCEEe-cCccC---CCCCCCCCCCccccchh
Confidence 4589999997765 45677 88899999999998853
No 59
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=95.40 E-value=0.0068 Score=41.61 Aligned_cols=34 Identities=15% Similarity=0.316 Sum_probs=27.6
Q ss_pred cccccCCCCcccccccccccCCcccccccccccccccC
Q psy16052 56 LQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVK 93 (476)
Q Consensus 56 ~~~~~C~~g~~~~~~~~~C~~~~~~~~C~~~~de~~c~ 93 (476)
..+|+|.+|.++. ..+.| +++.||.|+|||..|.
T Consensus 8 ~~~F~C~~g~CI~-~~~~C---DG~~DC~DgSDE~~c~ 41 (45)
T 1d2l_A 8 PGEFACANSRCIQ-ERWKC---DGDNDCLDNSDEAPAL 41 (45)
T ss_dssp BTCEEETTTEEEC-GGGTT---TSSCTTTTCSTTSTTT
T ss_pred CCceEcCCCCeEe-hhhcc---CCCCCCCCCCCCCCCc
Confidence 4579999887665 45677 8999999999999874
No 60
>4dwe_A Uncharacterized protein; hypothetical protein, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.01A {Bacteroides ovatus}
Probab=95.23 E-value=1.6 Score=43.50 Aligned_cols=174 Identities=14% Similarity=0.233 Sum_probs=100.5
Q ss_pred ChHHHHHHHHcCCeeeeCCCCCCCCccccCCCCHHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcccCchHHHHHHHH
Q psy16052 225 NYSAVQELHRKGHEVAVHSITHNDDENFWSNATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEE 304 (476)
Q Consensus 225 ~~~~v~~l~~~GHEIg~Hs~~H~~~~~~~~~~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~~~~~~~~~~l~~ 304 (476)
-|+.+++|+.-|..|+.|...+... ..+.+.+++++..+..+|.+ .+.|...+-+.-|- ++..+- .+.
T Consensus 177 ~W~~vkEm~nyG~~ia~Hdv~~~~~-----~~~~d~i~~~f~~aq~~I~~--~l~Gr~~Kml~ePn----Gn~~Yi-~aa 244 (480)
T 4dwe_A 177 VWGNLQEMMNYGVSIAFHDLNLPDE-----DKTEDKLLAQFPVAQSMIRE--KLNNRTCKMLAEPN----GDKNYI-KAA 244 (480)
T ss_dssp CHHHHHHHHTTTCEEEBCCCSSCGG-----GCSHHHHHHHHHHHHHHHHH--HTTTCCCCEEECCT----TCHHHH-HHH
T ss_pred ChHhHHHHHhcCcceEecccccccc-----ccchhhHHHHHHHHHHHHHH--HhcCCccceeecCC----CchHHH-HHH
Confidence 3589999999999999999988774 24557888888888888876 57787888887783 333332 222
Q ss_pred cCCeEeeecccCCCCCCCCCccccccCCCCcCCCCcCCCCCCCCeEEEeccccccCCCCCCCCCCCCCcccCCCCCCCCh
Q psy16052 305 QAFLYDSTITAPLSNPPLWPYTMYFRMPHRCHGNLQHCPTRSHAVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTG 384 (476)
Q Consensus 305 ~G~~Ydss~~~~~~~~p~~pytl~~~~~~~c~~~~~~cp~~~~~lweiP~~~~~~~~~p~~~~~~~g~~~~d~~~~~~~~ 384 (476)
+++.--..+..-.+..+.+|+.....+. =..++-.... .| .| ..-.++
T Consensus 245 ~~~d~Iqtitaq~G~~kl~Pf~~~~dL~----------------kv~i~R~F~~---~~------~g-------~~~Ts~ 292 (480)
T 4dwe_A 245 LRYDKIRTLCAQSGATKLYPFQENGDIE----------------QVVIERAFYD---PP------EG-------SGLTNP 292 (480)
T ss_dssp TTSTTCCEEEESSSCBCCCTTTCCSCCT----------------TEEEECBCCC---CC------TT-------SCCCHH
T ss_pred hcCCchhhhHhhcCCcccccccccCcHH----------------Hheeehhccc---cc------cc-------ccccCh
Confidence 3332122233322344677776553321 1111111110 00 01 011234
Q ss_pred HHHHHHHHHHHHHHhccCCcceEEeecchhhcCChHHHHHHHHHHHHHHhh-----CCCEEEEeHHHHHHHh
Q psy16052 385 DQFYNFLNHNFDRHYDQNRAPLGLYFHAAWLKNNPEFLDAFLYWVDEIIER-----HKDVYFVTMTQVIQWI 451 (476)
Q Consensus 385 ~~~~~~l~~~f~~~y~~~r~p~~i~~H~~w~~~~p~~~~al~~fl~~i~~~-----~~dV~fvT~~qi~~w~ 451 (476)
+.+-+++.......- ..|.-+.|..|.. ...+. .||.||... .+.|||.+.+|+-++.
T Consensus 293 ~~~k~~i~~~l~~~~-eeR~ai~IGvh~t-----d~~W~---dfl~wLn~~YG~~G~DslWfp~~EEyyEY~ 355 (480)
T 4dwe_A 293 DMIKAAILKEMENPK-EERAAISIGAHNT-----DTGWV---NFLEWLNDTYGRDGDDSMWFTNQEEYYEYY 355 (480)
T ss_dssp HHHHHHHHHHHTSCG-GGCCCEEEEESSC-----CHHHH---HHHHHHHHHTSTTTTCCEEEECHHHHHHHH
T ss_pred hHHHHHHHHHhcCCc-cccceeEEeecCC-----CCcHH---HHHHHHHHHhCcCCCcccccCCHHHHHHHH
Confidence 455555544443222 3455578999833 33444 456666433 5669999999999843
No 61
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=95.20 E-value=0.0095 Score=41.25 Aligned_cols=33 Identities=18% Similarity=0.400 Sum_probs=26.3
Q ss_pred cccccCC-----CCcccccccccccCCccccccccccccccc
Q psy16052 56 LQAIRCP-----AGLYFDIEKQTCDWKGAVKNCKLKNKERKV 92 (476)
Q Consensus 56 ~~~~~C~-----~g~~~~~~~~~C~~~~~~~~C~~~~de~~c 92 (476)
..+|+|. +|.++. ..+.| +++.||.|+|||..|
T Consensus 9 ~~~F~C~~~~~~~g~CIp-~~~~C---DG~~DC~DgSDE~~C 46 (47)
T 1k7b_A 9 PGQFRCSEPPGAHGECYP-QDWLC---DGHPDCDDGRDEWGC 46 (47)
T ss_dssp TTEECCSSCTTSCCCCEE-GGGSS---CSSCCSSSSTTTGGG
T ss_pred CCceEcCCCCCCCCcCCC-ccccC---CCcCCCCCCcccCCC
Confidence 4578898 666654 45677 889999999999987
No 62
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=95.06 E-value=0.74 Score=43.31 Aligned_cols=206 Identities=14% Similarity=0.138 Sum_probs=107.1
Q ss_pred eEEEeecCCCC-CccHHHHHHHHhccCCCCCCCCceEEEEecccCCCh-HHHHHHHHcCCeeeeCC----CCCCC----C
Q psy16052 180 MITITFDDAIN-NNNIALYKEMFNGKRKNPNGCDIKATFFVSHKYTNY-SAVQELHRKGHEVAVHS----ITHND----D 249 (476)
Q Consensus 180 ~V~lTFDdg~~-~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~~~~-~~v~~l~~~GHEIg~Hs----~~H~~----~ 249 (476)
.|+|-+||-.. ..... .++ . -+.+.||-|....+.. +.++..+++||||-.|- ..... .
T Consensus 5 ~lAIVIDD~G~~~~~~~---~i~-~-------Lp~pvT~Ai~P~~p~~~~~a~~A~~~G~EvllHlPMep~~~~~~~~gp 73 (245)
T 2nly_A 5 RAAIIIDDFGGDVKGVD---DFL-T-------GEIPVTVAVMPFLEHSTKQAEIAQAAGLEVIVHMPLEPKKGKISWLGP 73 (245)
T ss_dssp EEEEEEEEESSCCTTHH---HHH-T-------CSSCEEEEECSSSTTHHHHHHHHHHTTCEEEEEEEECCC--------C
T ss_pred EEEEEEeCCCCCHHHHH---HHH-c-------CCCCeEEEECCCCCCHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCc
Confidence 45666666554 34433 344 3 5889999998765443 67788899999999994 22111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHHHHHhhcccCCcccEEecCCc-cc--Cch---HHHHHHHHcCCeEeeecccCCCCCCCC
Q psy16052 250 ENFWSNATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYL-RV--GGN---NQFTMMEEQAFLYDSTITAPLSNPPLW 323 (476)
Q Consensus 250 ~~~~~~~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l-~~--~~~---~~~~~l~~~G~~Ydss~~~~~~~~p~~ 323 (476)
......++.++++.-|..+... +++ .+|+.---+ .. +.. ..++.|++.|+.|--|....
T Consensus 74 ~~L~~~~s~~ei~~~l~~al~~------vP~--a~GvnNHmGS~~T~~~~~m~~vm~~l~~~gL~fvDS~Ts~------- 138 (245)
T 2nly_A 74 SGITSNLSVGEVKSRVRKAFDD------IPY--AVGLNNHMGSKIVENEKIMRAILEVVKEKNAFIIDSGTSP------- 138 (245)
T ss_dssp CCBCTTCCHHHHHHHHHHHHHH------STT--CCEEEEEECTTGGGCHHHHHHHHHHHHHTTCEEEECCCCS-------
T ss_pred ccCcCCCCHHHHHHHHHHHHHH------CCC--cEEEecccccchhcCHHHHHHHHHHHHHCCCEEEcCCCCc-------
Confidence 1123468888888777755443 332 233332111 11 121 25677888987554333221
Q ss_pred CccccccCCCCcCCCCcCCCCCCCCeEEEeccccccCCCCCCCCCCCCCcccCCCCCCCChHHHHHHHHHHHHHHhccCC
Q psy16052 324 PYTMYFRMPHRCHGNLQHCPTRSHAVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNR 403 (476)
Q Consensus 324 pytl~~~~~~~c~~~~~~cp~~~~~lweiP~~~~~~~~~p~~~~~~~g~~~~d~~~~~~~~~~~~~~l~~~f~~~y~~~r 403 (476)
.+.-...... ...+..+--+ ++++ ...+.+.+.+.|......... ++
T Consensus 139 -~S~a~~~A~~----------~gvp~~~rdv-FLD~--------------------~~~~~~~I~~ql~~a~~~A~~-~G 185 (245)
T 2nly_A 139 -HSLIPQLAEE----------LEVPYATRSI-FLDN--------------------THSSRKEVIKNMRKLAKKAKQ-GS 185 (245)
T ss_dssp -SCSHHHHHHH----------TTCCEEECCE-ESCC--------------------TTCCHHHHHHHHHHHHHHHHT-TS
T ss_pred -ccHHHHHHHH----------cCCCeEEeeE-ECCC--------------------CCCCHHHHHHHHHHHHHHHhh-cC
Confidence 1100000000 0001111000 0111 023556666666554444433 33
Q ss_pred cceEEeecchhhcCChHHHHHHHHHHHHHHhhCCCEEEEeHHHHHH
Q psy16052 404 APLGLYFHAAWLKNNPEFLDAFLYWVDEIIERHKDVYFVTMTQVIQ 449 (476)
Q Consensus 404 ~p~~i~~H~~w~~~~p~~~~al~~fl~~i~~~~~dV~fvT~~qi~~ 449 (476)
.-++ --| ++-. +..-+++|++++..+.+ .+|-+|+.++++.
T Consensus 186 ~aIa-IGh-p~p~-~~~Ti~aL~~~~~~l~~--~gi~LVpvS~l~~ 226 (245)
T 2nly_A 186 EPIG-IGH-VGVR-GDETYAGIRSMLDEFQA--ESIQLVPVSQLLP 226 (245)
T ss_dssp CCEE-EEE-CSTT-HHHHHHHHGGGHHHHHH--TTEEECCGGGGCC
T ss_pred cEEE-EEC-CCCC-chhHHHHHHHHhhHHhh--CCEEEEEHHHHhh
Confidence 3222 335 3111 12378999999999875 7899999999974
No 63
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=95.04 E-value=0.013 Score=38.77 Aligned_cols=34 Identities=18% Similarity=0.390 Sum_probs=26.4
Q ss_pred cccccCCC--CcccccccccccCCcccccccccccccccC
Q psy16052 56 LQAIRCPA--GLYFDIEKQTCDWKGAVKNCKLKNKERKVK 93 (476)
Q Consensus 56 ~~~~~C~~--g~~~~~~~~~C~~~~~~~~C~~~~de~~c~ 93 (476)
..+|+|.. |.++. ..++| +++.+|.++|||..|.
T Consensus 3 ~~~f~C~~~~g~Cip-~~~~C---Dg~~DC~dgsDE~~C~ 38 (39)
T 3dpr_E 3 IHEISCGAHSTQCIP-VSWRC---DGENDCDSGEDEENCG 38 (39)
T ss_dssp TTTCCCSSSSSCCCC-TTSSS---SSSCCSTTTTTSTTCC
T ss_pred CCceecCCCCCCEeC-ccccC---CCcccCcCCcccccCC
Confidence 45889986 66554 45677 8889999999999874
No 64
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=94.94 E-value=0.011 Score=40.27 Aligned_cols=34 Identities=21% Similarity=0.433 Sum_probs=27.5
Q ss_pred cccccCCCCcccccccccccCCcccccccccccccccC
Q psy16052 56 LQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVK 93 (476)
Q Consensus 56 ~~~~~C~~g~~~~~~~~~C~~~~~~~~C~~~~de~~c~ 93 (476)
..+|+|.+|.++. ..+.| +++.||.|+|||..|.
T Consensus 7 ~~~F~C~~g~CI~-~~~~C---Dg~~DC~DgSDE~~~~ 40 (44)
T 1j8e_A 7 STQFKCNSGRCIP-EHWTC---DGDNDCGDYSDETHAN 40 (44)
T ss_dssp TTEEECTTSCEEE-GGGTT---SSSCCSSSSGGGSHHH
T ss_pred CCceEeCCCCeEe-cCccc---CCCCCCCCCCCCCCcc
Confidence 4589999987665 45777 8999999999998763
No 65
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=94.61 E-value=0.016 Score=40.69 Aligned_cols=34 Identities=21% Similarity=0.422 Sum_probs=26.9
Q ss_pred cccccCC-CCcccccccccccCCcccccccccccccccC
Q psy16052 56 LQAIRCP-AGLYFDIEKQTCDWKGAVKNCKLKNKERKVK 93 (476)
Q Consensus 56 ~~~~~C~-~g~~~~~~~~~C~~~~~~~~C~~~~de~~c~ 93 (476)
..+|+|. +|.++. ..+.| +++.||.|+|||..|.
T Consensus 9 ~~~F~C~~~g~CI~-~~~~C---DG~~DC~DgSDE~~C~ 43 (50)
T 2knx_A 9 PSSFSCPGTHVCVP-ERWLC---DGDKDCADGADESIAA 43 (50)
T ss_dssp TTEEEETTTTEEEE-TTTTT---SSSCCSTTCGGGSGGG
T ss_pred CCcEEcCCCCeEcC-hhhcC---CCCCCCCCCCcccccc
Confidence 4589996 776654 45677 8899999999999883
No 66
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=94.17 E-value=0.022 Score=52.25 Aligned_cols=53 Identities=13% Similarity=0.264 Sum_probs=38.1
Q ss_pred cccccCC--CCcccccccccccCCccccccccccccc--ccCCCCCCCCC-CCCCC--ceecCCCCccCC
Q psy16052 56 LQAIRCP--AGLYFDIEKQTCDWKGAVKNCKLKNKER--KVKPLLYTDEP-LCQDG--FLACGDGACIER 118 (476)
Q Consensus 56 ~~~~~C~--~g~~~~~~~~~C~~~~~~~~C~~~~de~--~c~~~~~~~~~-~C~~~--~~~C~~g~Ci~~ 118 (476)
..+|+|. +|.|+. ..+.| ++++||.+++||. +|.. + +|.+. .++|.++.|+..
T Consensus 55 ~~eFqC~~~~g~CIp-~~wvC---DG~~DC~DGSDE~~~~C~~------~~tc~~~qF~g~~~~d~C~kr 114 (220)
T 2gtl_N 55 KRTFQCGGNEQECIS-DLLVC---DGHKDCHNAHDEDPDVCDT------SVVKAGNVFSGTSTWHGCLAR 114 (220)
T ss_dssp TTEEECCSSSCCEEE-TTTTT---SSSCCSTTCTTSCGGGGCG------GGGCTTCEEEEEEEECSSCCC
T ss_pred CCccCcCCCCCcEeC-cceec---CCCCCCCCCCccCcccCCC------CCccCCcceeeEecCChhhcC
Confidence 4589995 466654 45677 8999999999996 7853 2 47554 456888888764
No 67
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=94.16 E-value=0.017 Score=39.94 Aligned_cols=34 Identities=18% Similarity=0.378 Sum_probs=26.3
Q ss_pred cccccCC-----CCcccccccccccCCcccccccccccccccC
Q psy16052 56 LQAIRCP-----AGLYFDIEKQTCDWKGAVKNCKLKNKERKVK 93 (476)
Q Consensus 56 ~~~~~C~-----~g~~~~~~~~~C~~~~~~~~C~~~~de~~c~ 93 (476)
..+|+|. ++.++. ..+.| +++.||.|+|||..|.
T Consensus 7 ~~~F~C~~~~~~~~~CIp-~~~~C---DG~~DC~DgSDE~~C~ 45 (47)
T 1jrf_A 7 PGQFRCSEPPGAHGECYP-QDWLC---DGHPDCDDGRDEWGCG 45 (47)
T ss_dssp CCCSCSSSCSCCCTTTSG-GGGSS---SSSCCSSSSCTTHHHH
T ss_pred CCeeECCCCCCCCCeEcC-HhhcC---CCCcCCCCCcccccCC
Confidence 4578898 565554 46777 8899999999999884
No 68
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=93.93 E-value=3.4 Score=39.17 Aligned_cols=204 Identities=11% Similarity=0.083 Sum_probs=105.4
Q ss_pred eEEEeecCCCCCccHHHHHHHHhccCCCCCCCCceEEEEecccCCCh-HHHHHHHHcCCeeeeCC----CCCC----CCc
Q psy16052 180 MITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKYTNY-SAVQELHRKGHEVAVHS----ITHN----DDE 250 (476)
Q Consensus 180 ~V~lTFDdg~~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~~~~-~~v~~l~~~GHEIg~Hs----~~H~----~~~ 250 (476)
.|+|-+||-..... ...+.+.. -+.+.||-|....+.- +.++..+++||||-.|- .... ...
T Consensus 31 ~lAIVIDD~G~~~~--~~~~~i~~-------LP~pvT~Ai~P~~p~~~~~a~~A~~~G~EvllHlPMep~~~p~~~~gp~ 101 (261)
T 2qv5_A 31 RVAIVVGGLGLSQT--GSQKAIRD-------LPPEVTLGFAASGNSLQRWMQDARREGHEILLQIPLEPFGYPGTNPGPD 101 (261)
T ss_dssp EEEEEEEEETSCHH--HHHHHHHH-------SCTTSEEEEETTCSSHHHHHHHHHHHTCCEEEEEEECCTTTTTSCCCTT
T ss_pred eEEEEEeCCCCCcH--HHHHHHHh-------CCCCeEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCcC
Confidence 46666777554432 12222233 4777788776654432 67788889999999993 2221 111
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHhhcccCCcccEEecCCc-cc--Cch---HHHHHHHHcCCeEeeecccCCCCCCCCC
Q psy16052 251 NFWSNATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYL-RV--GGN---NQFTMMEEQAFLYDSTITAPLSNPPLWP 324 (476)
Q Consensus 251 ~~~~~~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l-~~--~~~---~~~~~l~~~G~~Ydss~~~~~~~~p~~p 324 (476)
.....++.++.++-|..+ |. .+++ .+|+.---+ .+ +.. ..++.|++.|+.|--|....
T Consensus 102 ~L~~~~s~~ei~~~l~~a---l~---~vP~--a~GvnNHmGS~~T~~~~~M~~vm~~L~~~gL~FlDS~Ts~-------- 165 (261)
T 2qv5_A 102 TLLAGDPAKVNIDRLHRS---MA---KITN--YTGVMNYLGGRFLAEQSALEPVMRDIGKRGLLFLDDGSSA-------- 165 (261)
T ss_dssp CBCTTSCHHHHHHHHHHH---HT---TCCC--CSEEEEEECTTGGGCHHHHHHHHHHHHHTTCEEEECSCCT--------
T ss_pred cCcCCCCHHHHHHHHHHH---HH---HCCC--cEEEecccccchhcCHHHHHHHHHHHHHCCCEEEcCCCCc--------
Confidence 123457788877766544 33 3443 344432111 11 111 25777888887654443321
Q ss_pred ccccccCCCCcCCCCcCCCCCCCCeEEEeccccccCCCCCCCCCCCCCcccCCCCCCCChHHHHHHHHHHHHHHhccCCc
Q psy16052 325 YTMYFRMPHRCHGNLQHCPTRSHAVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRA 404 (476)
Q Consensus 325 ytl~~~~~~~c~~~~~~cp~~~~~lweiP~~~~~~~~~p~~~~~~~g~~~~d~~~~~~~~~~~~~~l~~~f~~~y~~~r~ 404 (476)
.+.-...... ...+..+--+ +++ +..+.+.+.+.|.......... +.
T Consensus 166 ~S~a~~~A~~----------~gvp~~~rdv-FLD---------------------~~~~~~~I~~qL~~a~~~Ar~~-G~ 212 (261)
T 2qv5_A 166 QSLSGGIAKA----------ISAPQGFADV-LLD---------------------GEVTEASILRKLDDLERIARRN-GQ 212 (261)
T ss_dssp TCCHHHHHHH----------HTCCEEECSE-ETT---------------------SSCSHHHHHHHHHHHHHHHHHH-SE
T ss_pred ccHHHHHHHH----------cCCCeEEeee-ecC---------------------CCCCHHHHHHHHHHHHHHHHhc-Cc
Confidence 1100000000 0001111000 011 1235566666665544443332 22
Q ss_pred ceEEeecchhhcCChHHHHHHHHHHHHHHhhCCCEEEEeHHHHHH
Q psy16052 405 PLGLYFHAAWLKNNPEFLDAFLYWVDEIIERHKDVYFVTMTQVIQ 449 (476)
Q Consensus 405 p~~i~~H~~w~~~~p~~~~al~~fl~~i~~~~~dV~fvT~~qi~~ 449 (476)
-++| -| + +|.-+++|++++..+.+ .+|-+|+.++++.
T Consensus 213 AIaI-Gh-p----~p~Ti~aL~~~~~~l~~--~gi~LVpvS~ll~ 249 (261)
T 2qv5_A 213 AIGV-AS-A----FDESIAAISKWSREAGG--RGIEIVGVSALVS 249 (261)
T ss_dssp EEEE-EE-C----CHHHHHHHHHHHHHGGG--GTEEECCHHHHC-
T ss_pred EEEE-eC-C----CHHHHHHHHHHhhhhhh--CCeEEEEHHHHhh
Confidence 2222 35 3 37789999999999864 7999999999975
No 69
>3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A*
Probab=92.19 E-value=0.26 Score=51.82 Aligned_cols=75 Identities=19% Similarity=0.122 Sum_probs=65.0
Q ss_pred HHHHHHHHcCC-eeeeCCCCCCCCccccCCCC-HHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcccCc---------
Q psy16052 227 SAVQELHRKGH-EVAVHSITHNDDENFWSNAT-VDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGG--------- 295 (476)
Q Consensus 227 ~~v~~l~~~GH-EIg~Hs~~H~~~~~~~~~~s-~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~~~~--------- 295 (476)
+..+++.+.|. ||-.-+++|...+. +. .++++.+|....+.++ ...|..|+||..|-..++.
T Consensus 125 ~~fr~L~~~G~iElit~~~tH~~lPL----l~~~e~~~~QI~~g~~~~~---~~FG~~P~G~WlpE~ay~~~~~~~~~~~ 197 (562)
T 3n98_A 125 GKLRELQDQGYVEVITSAATHGYLPL----LGRDEAIRAQIANGVATYE---KHFGMKPKGIWLPECAYRPAGEWELPGG 197 (562)
T ss_dssp HHHHHHHHTTSEEEEEECTTCBCGGG----CSCHHHHHHHHHHHHHHHH---HHHSSCCSBEECGGGCBCCSEEEECGGG
T ss_pred HHHHHHHHCCCEEEEcCCchhhHhhc----CCCHHHHHHHHHHHHHHHH---HHcCCCCCEEECcccceeCccccccccc
Confidence 56788889995 99999999998653 43 7889999999988888 4778999999999999987
Q ss_pred ------hHHHHHHHHcCCeE
Q psy16052 296 ------NNQFTMMEEQAFLY 309 (476)
Q Consensus 296 ------~~~~~~l~~~G~~Y 309 (476)
. ..++|++.|+.|
T Consensus 198 ~~~~~~~-i~~~L~~~Gi~y 216 (562)
T 3n98_A 198 RKVKRQG-IEKFLEEFGLRY 216 (562)
T ss_dssp CEEEECC-HHHHHHTTTCCE
T ss_pred cccchhh-HHHHHHHcCCeE
Confidence 6 899999999987
No 70
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A
Probab=92.02 E-value=0.29 Score=51.19 Aligned_cols=75 Identities=11% Similarity=0.057 Sum_probs=64.6
Q ss_pred HHHHHHHHcCC-eeeeCCCCCCCCccccCCC-CHHHHHHHHHHHHHHHHHhhcccCCcccEEecCCcccCc---------
Q psy16052 227 SAVQELHRKGH-EVAVHSITHNDDENFWSNA-TVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGG--------- 295 (476)
Q Consensus 227 ~~v~~l~~~GH-EIg~Hs~~H~~~~~~~~~~-s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~P~l~~~~--------- 295 (476)
+..+++.+.|. ||-.-+++|...+. + ..++++.+|....+.++ ...|..|+||..|-..++.
T Consensus 146 ~~fr~L~~~G~iEiit~~~tH~~lPL----l~~~e~~~~QI~~g~~~~~---~~FG~~P~G~WlpE~ay~~~~~~~~~~~ 218 (540)
T 3p0b_A 146 AAFRKAEEGGQVELITSNATHGYSPL----LGYDEALWAQIKTGVSTYR---RHFAKDPTGFWLPEMAYRPKGPWKPPVE 218 (540)
T ss_dssp HHHHHHHHHTSEEEEEECTTCBCGGG----CSCHHHHHHHHHHHHHHHH---HHHSSCCCBEECGGGCBCCSEEECCSSS
T ss_pred HHHHHHHHCCCEEEEcCCchhhHHhc----CCCHHHHHHHHHHHHHHHH---HHhCCCCCEEECcccceeCccccccccc
Confidence 45677888995 99999999998753 4 58999999999988888 4778999999999999887
Q ss_pred --------hHHHHHHHHcCCeE
Q psy16052 296 --------NNQFTMMEEQAFLY 309 (476)
Q Consensus 296 --------~~~~~~l~~~G~~Y 309 (476)
. ..++|++.|+.|
T Consensus 219 ~~~~~~~~~-l~~~L~~~Gi~y 239 (540)
T 3p0b_A 219 GPPEGVRPG-VDELLMRAGIRY 239 (540)
T ss_dssp CSCCEEECC-HHHHHHHTTCCE
T ss_pred cccccchhh-HHHHHHHcCCeE
Confidence 5 899999999987
No 71
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=90.73 E-value=0.24 Score=52.30 Aligned_cols=46 Identities=13% Similarity=0.343 Sum_probs=35.3
Q ss_pred ccccCC-CCcccccccccccCCcccccccccccccccCCCCCCCCCCCCCCceecCCCCccC
Q psy16052 57 QAIRCP-AGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIE 117 (476)
Q Consensus 57 ~~~~C~-~g~~~~~~~~~C~~~~~~~~C~~~~de~~c~~~~~~~~~~C~~~~~~C~~g~Ci~ 117 (476)
.+|+|. +|.|+. ..+.| ++..||.|++||..|.. ....|..+++|+
T Consensus 69 ~~f~C~~~g~Ci~-~~~~C---dg~~dC~d~sdE~~c~~-----------~~~~C~~~~~~~ 115 (537)
T 3ojy_B 69 EGFVCAQTGRCVN-RRLLC---NGDNDCGDQSDEANCRR-----------IYKKCQHEMDQY 115 (537)
T ss_dssp SSEECTTTCCEEC-GGGTT---SSSCCSSSSCTTSSCSS-----------CSSCCSSCCBCC
T ss_pred CccCcCCCCcEee-ccccC---CCCCCCCCccccccCCC-----------CCCccccCcCCC
Confidence 589999 887765 56778 77789999999998853 234677778887
No 72
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=89.80 E-value=0.11 Score=47.81 Aligned_cols=34 Identities=15% Similarity=0.305 Sum_probs=26.4
Q ss_pred cccccCCC--CcccccccccccCCccccccccccccc--ccC
Q psy16052 56 LQAIRCPA--GLYFDIEKQTCDWKGAVKNCKLKNKER--KVK 93 (476)
Q Consensus 56 ~~~~~C~~--g~~~~~~~~~C~~~~~~~~C~~~~de~--~c~ 93 (476)
..+|+|.. |.|+. ..+.| +|..||.|+|||. .|.
T Consensus 56 ~~~F~C~~~~g~CI~-~~~~C---DG~~DC~DgSDE~~~~C~ 93 (217)
T 2gtl_M 56 EHESECRGDVPECIH-DLLFC---DGEKDCRDGSDEDPETCS 93 (217)
T ss_dssp TTEEECSSSSCCEEE-GGGTT---SSSCCSSSSTTTSHHHHC
T ss_pred CCceecCCCCCcEec-hhhcc---CCCCCCCCCCccccCcCC
Confidence 45899964 76665 45677 8999999999998 674
No 73
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=86.93 E-value=0.64 Score=49.14 Aligned_cols=43 Identities=21% Similarity=0.486 Sum_probs=30.9
Q ss_pred CCCCccccCCCCcccccCC-CCcccccccccccCCcccccccccccccccCC
Q psy16052 44 NCRDVIQCTSSGLQAIRCP-AGLYFDIEKQTCDWKGAVKNCKLKNKERKVKP 94 (476)
Q Consensus 44 ~C~~~~~C~~g~~~~~~C~-~g~~~~~~~~~C~~~~~~~~C~~~~de~~c~~ 94 (476)
.|..-..| ..+|+|. +|.|+. ..+.| ++..||.|++||..|..
T Consensus 59 ~c~~~~~c----~~~f~C~~~g~Ci~-~~~~C---dg~~dC~d~sDE~~C~~ 102 (554)
T 3ojy_A 59 TCVRQAQC----GQDFQCKETGRCLK-RHLVC---NGDQDCLDGSDEDDCED 102 (554)
T ss_dssp CC--CCCC----SSSEECSSSCCEEC-GGGTT---SSSCCSSSCTTSSSCCS
T ss_pred CCcccCCC----CCcCccCCCCEEcc-ccccc---CCcccCCCccccccCCC
Confidence 35444455 2589999 887665 45677 77889999999999964
No 74
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=45.00 E-value=14 Score=41.27 Aligned_cols=34 Identities=24% Similarity=0.523 Sum_probs=26.7
Q ss_pred ccccCCCCcccccccccccCCcccccccccccccccCC
Q psy16052 57 QAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKP 94 (476)
Q Consensus 57 ~~~~C~~g~~~~~~~~~C~~~~~~~~C~~~~de~~c~~ 94 (476)
..|+|.+|.++. ....| ++.+||.|+|||.+|..
T Consensus 121 ~~F~C~~g~ci~-~~~~c---~g~~dC~d~sde~~C~~ 154 (913)
T 3t5o_A 121 NKFRCDSGRCIA-RKLEC---NGENDCGDNSDERDCGR 154 (913)
T ss_dssp SEEECTTSCEEE-GGGSS---SSSCCSSSSGGGTTCSS
T ss_pred cccccCCCceEc-cceec---CCcccCCCccccccCCC
Confidence 468898887654 35667 77889999999999964
No 75
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1
Probab=44.34 E-value=96 Score=29.59 Aligned_cols=82 Identities=18% Similarity=0.144 Sum_probs=57.3
Q ss_pred hHHHHHHHHcCC-eeeeCCCCCCCCccccCCCCHHHHHHHHHHHHHHHHH-hhcccCCcccEEec-CCcccCchHHHHHH
Q psy16052 226 YSAVQELHRKGH-EVAVHSITHNDDENFWSNATVDDWAKEMAGMRIIAEK-YANLSDNSVVGVRA-PYLRVGGNNQFTMM 302 (476)
Q Consensus 226 ~~~v~~l~~~GH-EIg~Hs~~H~~~~~~~~~~s~e~~~~ei~~~~~~l~~-~~~i~g~~~~gfR~-P~l~~~~~~~~~~l 302 (476)
++.|++++++|- ||..=+|.-.+. .-.+.|.+.++|....+.+++ | ++.+....||-+ ||+. +.. +-.+|
T Consensus 87 ~~~vk~lV~~Grle~vgG~wve~D~----~~~~~eslirQl~~G~~~~~~~f-G~~~~~~~~W~pD~FG~-s~~-lP~il 159 (298)
T 1o7d_A 87 QKIVRELVRQGRLEFANGGWVMNDE----ATTHYGAIIDQMTLGLRFLEETF-GSDGRPRVAWHIDPFGH-SRE-QASLF 159 (298)
T ss_dssp HHHHHHHHHTTSEEESSCSSSCBCS----SSCCHHHHHHHHHHHHHHHHHHH-GGGGCCSEEEESSSSSC-CHH-HHHHH
T ss_pred HHHHHHHHHCCCEEEECceeecccc----CCCCHHHHHHHHHHHHHHHHHHc-CCCCCCceeEeCCCCCc-cHH-HHHHH
Confidence 378999999994 786666754432 346889999999999888874 4 333335566766 6655 443 77889
Q ss_pred HHcCCeEeeecc
Q psy16052 303 EEQAFLYDSTIT 314 (476)
Q Consensus 303 ~~~G~~Ydss~~ 314 (476)
++.|+.|-....
T Consensus 160 ~~~Gi~~~~~~R 171 (298)
T 1o7d_A 160 AQMGFDGFFFGR 171 (298)
T ss_dssp HHHTCCEEEESC
T ss_pred HHcCCCeEEEEe
Confidence 999997755543
No 76
>1v6t_A Hypothetical UPF0271 protein PH0986; TIM-barrel, lactam utilization protein, structural genomics; 1.70A {Pyrococcus horikoshii} SCOP: c.6.2.5
Probab=42.28 E-value=2.1e+02 Score=26.53 Aligned_cols=61 Identities=13% Similarity=0.033 Sum_probs=45.2
Q ss_pred HHHHHHHHcCCeeeeCCCCCCCCccccC---CCCHHHHHHHHHHHHHHHHHhhcccCCcccEEec
Q psy16052 227 SAVQELHRKGHEVAVHSITHNDDENFWS---NATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRA 288 (476)
Q Consensus 227 ~~v~~l~~~GHEIg~Hs~~H~~~~~~~~---~~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~ 288 (476)
..|+...+.|-.||.|- ...+...|-. .++.++..+.+..+.-.|+.++...|.++....+
T Consensus 47 ~tv~lA~~~gV~IGAHP-gypDl~GFGRR~m~~s~~el~~~v~YQiGAL~a~a~~~G~~l~hVKP 110 (255)
T 1v6t_A 47 KTVRLAKENDVQVGAHP-GYPDLMGFGRRYMKLTPEEARNYILYQVGALYAFAKAEGLELQHVKP 110 (255)
T ss_dssp HHHHHHHHTTCEEEEEC-CCSCTTTTTCSCCCCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHcCCeEecCC-CCCcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEeEEecc
Confidence 56777888999999995 2233322211 5899999999999999999888888876666553
No 77
>2x5e_A UPF0271 protein PA4511; unknown function; HET: CIT; 2.30A {Pseudomonas aeruginosa} PDB: 2xu2_A*
Probab=38.38 E-value=2e+02 Score=26.72 Aligned_cols=101 Identities=14% Similarity=0.140 Sum_probs=61.5
Q ss_pred CCCCeEEEeecCCC-----CCccHHHHHHHHhccCCCCCCCCceEEEEecccCCCh----HHHHHHHHcCCeeeeCCCCC
Q psy16052 176 EVPQMITITFDDAI-----NNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKYTNY----SAVQELHRKGHEVAVHSITH 246 (476)
Q Consensus 176 ~~Pq~V~lTFDdg~-----~~~~~~~~l~ll~~~~~np~~c~i~aTFFv~~~~~~~----~~v~~l~~~GHEIg~Hs~~H 246 (476)
++++.|-|.=|-|= .....+.++.+.... | --|+.+| .++ ..|+...+.|-.||.|- ..
T Consensus 4 ~~~~~iDLN~DlGEsfG~w~~G~D~~lm~~VtSA--N-IACGfHA--------GDp~~M~~Tv~lA~~~gV~IGAHP-gy 71 (252)
T 2x5e_A 4 DTGRLILLNCDMGESFGAWRMGDDVHSMPLVDQA--N-LACGFHA--------GDPLTMRRAVELAVRHGVSIGAHP-AY 71 (252)
T ss_dssp ----CCEEEEEECCCBTTBCCSCHHHHGGGCSEE--E-EECSSSS--------CCHHHHHHHHHHHHHTTCEEEEEC-CC
T ss_pred CCCCeEEEeccCCCCCCCCCCCCHHHHHHhhhhh--h-hhccccC--------CCHHHHHHHHHHHHHcCCeeecCC-CC
Confidence 34555666666443 123345666666540 0 0144444 454 56777888999999995 22
Q ss_pred CCCccccC---CCCHHHHHHHHHHHHHHHHHhhcccCCcccEEec
Q psy16052 247 NDDENFWS---NATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRA 288 (476)
Q Consensus 247 ~~~~~~~~---~~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~ 288 (476)
.+...|-. .++.++..+.+..+.-.|+.|+...|.++....+
T Consensus 72 pDl~GFGRR~m~~s~~el~~~v~YQiGAL~a~a~~~G~~l~hVKP 116 (252)
T 2x5e_A 72 PDLSGFGRRSLACSAEEVHAMVLYQIGALDAFCRSLGTQVAYVKP 116 (252)
T ss_dssp SCTTTTTCSCCCCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEECC
T ss_pred CcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEeEEecc
Confidence 33322211 5899999999999999999888777776666543
No 78
>2dfa_A Hypothetical UPF0271 protein TTHB195; lactam utilization protein, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} SCOP: c.6.2.5
Probab=37.21 E-value=1.7e+02 Score=27.19 Aligned_cols=60 Identities=13% Similarity=0.070 Sum_probs=43.0
Q ss_pred HHHHHHHHcCCeeeeCCCCCCCCccccC---CCCHHHHHHHHHHHHHHHHHhhcccCCcccEEe
Q psy16052 227 SAVQELHRKGHEVAVHSITHNDDENFWS---NATVDDWAKEMAGMRIIAEKYANLSDNSVVGVR 287 (476)
Q Consensus 227 ~~v~~l~~~GHEIg~Hs~~H~~~~~~~~---~~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR 287 (476)
..|+...+.|-.||.|- ...+...|-. .++.++..+.+..+.-.|+.|+...|.++....
T Consensus 47 ~tv~lA~~~gV~IGAHP-gypDl~GFGRR~m~~s~~el~~~v~YQiGAL~a~a~~~G~~l~hVK 109 (250)
T 2dfa_A 47 EAVRLAKAHGVAVGAHP-GFPDLVGFGRREMALSPEEVYADVLYQIGALSAFLKAEGLPLHHVK 109 (250)
T ss_dssp HHHHHHHHTTCEEEEEC-CCSCTTTTTCSCCCCCHHHHHHHHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred HHHHHHHHcCCeEecCC-CCCcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEeEEec
Confidence 56777888999999995 2233322211 589999999999999999988777765554443
No 79
>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17
Probab=36.97 E-value=69 Score=25.61 Aligned_cols=54 Identities=22% Similarity=0.466 Sum_probs=37.5
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHhccCCcceEE-eecchhhcCChHH-HHHHHHHHHHHHh
Q psy16052 376 DSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGL-YFHAAWLKNNPEF-LDAFLYWVDEIIE 434 (476)
Q Consensus 376 d~~~~~~~~~~~~~~l~~~f~~~y~~~r~p~~i-~~H~~w~~~~p~~-~~al~~fl~~i~~ 434 (476)
.||.+..|..+++++|...+.|.|- ..||.+ |+. +...++- -+.-++|++.|..
T Consensus 20 ASCVnaPSSkeTyEWLqAal~RKyp--~~~f~~~YID---I~~~~~~l~d~~~~~ae~I~e 75 (111)
T 1xg8_A 20 ASCVNAPTSKDIYDWLQPLLKRKYP--NISFKYTYID---ITKDNDNLTDHDLQFIERIEQ 75 (111)
T ss_dssp GGGSSSCCHHHHHHHHHHHHHHHCT--TSCEEEEEEE---TTTC---CCHHHHHHHHHHHT
T ss_pred hhccCCCCchhHHHHHHHHHhCcCC--CCceEEEEEe---ccCCccchhHHHHHHHHHHhh
Confidence 5799999999999999999999985 356754 443 2222222 1446779998874
No 80
>1xw8_A UPF0271 protein YBGL; NESG, northeast structural genomics consortium, structural genomics, protein structure initiative, PSI, X-RAY; 2.00A {Escherichia coli} SCOP: c.6.2.5
Probab=31.79 E-value=1.8e+02 Score=26.94 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=69.3
Q ss_pred HHHHHHHHhccCCCCCCCCceEEEEecccCCCh----HHHHHHHHcCCeeeeCCCCCCCCcccc---CCCCHHHHHHHHH
Q psy16052 194 IALYKEMFNGKRKNPNGCDIKATFFVSHKYTNY----SAVQELHRKGHEVAVHSITHNDDENFW---SNATVDDWAKEMA 266 (476)
Q Consensus 194 ~~~~l~ll~~~~~np~~c~i~aTFFv~~~~~~~----~~v~~l~~~GHEIg~Hs~~H~~~~~~~---~~~s~e~~~~ei~ 266 (476)
.+.++.+..... --|+..| .++ ..|+...+.|-.||.|- ...+...|- -.++.++..+.+.
T Consensus 16 D~~lm~~VtSAN---IACGfHA--------GDp~~M~~Tv~lA~~~gV~IGAHP-gypDl~GFGRR~m~~s~~el~~~v~ 83 (252)
T 1xw8_A 16 DAELLTLVSSAN---IACGFHA--------GDAQIMQACVREAIKNGVAIGAHP-SFPDRENFGRSAMQLPPETVYAQTL 83 (252)
T ss_dssp HHHHHHHCSEEE---EECSSSS--------CCHHHHHHHHHHHHHHTCEEEEEC-CCC-------CCCCCCHHHHHHHHH
T ss_pred HHHHHHHhhhHH---HhhcccC--------CCHHHHHHHHHHHHHcCCeeecCC-CCCcccCCCCCCCCCCHHHHHHHHH
Confidence 456777776500 0144444 454 56777888999999995 223332221 1589999999999
Q ss_pred HHHHHHHHhhcccCCcccEEec-----------------------------CCcccCchHHHHHHHHcCCeEeeecccC
Q psy16052 267 GMRIIAEKYANLSDNSVVGVRA-----------------------------PYLRVGGNNQFTMMEEQAFLYDSTITAP 316 (476)
Q Consensus 267 ~~~~~l~~~~~i~g~~~~gfR~-----------------------------P~l~~~~~~~~~~l~~~G~~Ydss~~~~ 316 (476)
.+.-.|+.|+...|.++....+ +.+...+....++.++.|+..-..++.|
T Consensus 84 YQiGAL~a~a~~~G~~l~hVKPHGALYN~~a~d~~~A~av~~av~~~d~~L~l~~l~gs~~~~~A~~~Gl~~~~E~FAD 162 (252)
T 1xw8_A 84 YQIGALATIARAQGGVMRHVKPHGMLYNQAAKEAQLADAIARAVYACDPALILVGLAGSELIRAGKQYGLTTREEVFAD 162 (252)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCCHHHHHHHTTCHHHHHHHHHHHHHHCTTCEEEEETTSHHHHHHHHTTCCEEEEECTT
T ss_pred HHHHHHHHHHHHcCCEeEEeCcCHHHHHHHhhCHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHHcCCcEEEEEeec
Confidence 9999999888777776665543 2222222236667777777776666654
No 81
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=31.30 E-value=51 Score=26.58 Aligned_cols=37 Identities=5% Similarity=-0.070 Sum_probs=26.7
Q ss_pred cceEEeecchhhcCChHHHHHHHHHHHHHHhhCCCEEEEeH
Q psy16052 404 APLGLYFHAAWLKNNPEFLDAFLYWVDEIIERHKDVYFVTM 444 (476)
Q Consensus 404 ~p~~i~~H~~w~~~~p~~~~al~~fl~~i~~~~~dV~fvT~ 444 (476)
.|+++.|+++|-. | -.++...|+.+.+.+++|.|+..
T Consensus 24 ~~vvv~F~a~wc~--~--C~~~~p~l~~la~~~~~v~f~kv 60 (118)
T 3evi_A 24 VWVIIHLYRSSIP--M--CLLVNQHLSLLARKFPETKFVKA 60 (118)
T ss_dssp CEEEEEEECTTSH--H--HHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CeEEEEEeCCCCh--H--HHHHHHHHHHHHHHCCCCEEEEE
Confidence 3889999999953 3 55666667776665888888653
No 82
>2kus_A SM-AMP-1.1A; plant antimicrobial peptide, chitin-binding peptide, antimic protein; NMR {Stellaria media}
Probab=22.82 E-value=26 Score=22.29 Aligned_cols=25 Identities=24% Similarity=0.670 Sum_probs=18.5
Q ss_pred CCCCCceecCCCCccCCCcccCCCC
Q psy16052 102 LCQDGFLACGDGACIERGLFCNGEK 126 (476)
Q Consensus 102 ~C~~~~~~C~~g~Ci~~~~~C~g~~ 126 (476)
.|.+....|.+|.|.++..+|-...
T Consensus 6 ~CG~~~g~C~~g~CCS~~G~CG~t~ 30 (35)
T 2kus_A 6 QCGPGWGGCRGGLCCSQYGYCGSGP 30 (35)
T ss_dssp BCBTTTBCCCTTCEECTTSBEECSH
T ss_pred ccCCCCCccCCCCccCCCccccCCh
Confidence 3655555689999999998887553
No 83
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=20.74 E-value=2.3e+02 Score=31.44 Aligned_cols=78 Identities=9% Similarity=0.103 Sum_probs=54.9
Q ss_pred hHHHHHHHHcC-CeeeeCCC-CCCCCccccCCCCHHHHHHHHHHHHHHHHHhhcccCCcccEEec-CCcccCchHHHHHH
Q psy16052 226 YSAVQELHRKG-HEVAVHSI-THNDDENFWSNATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRA-PYLRVGGNNQFTMM 302 (476)
Q Consensus 226 ~~~v~~l~~~G-HEIg~Hs~-~H~~~~~~~~~~s~e~~~~ei~~~~~~l~~~~~i~g~~~~gfR~-P~l~~~~~~~~~~l 302 (476)
++.|++++++| .||| +| .-.+. .-.+.|.+.++|...++.+++|. + ....||-+ ||+.. .. +-++|
T Consensus 91 ~~~vk~lV~~GrleiG--~wYv~~D~----~~~~~es~irq~~~G~~~~~~fG-~--~~~~~w~pD~FG~s-~~-lPqil 159 (923)
T 2wyh_A 91 EPEIRQAIASGKLRIG--PFYILQDD----FLTSSESNVRNMLIGKEDCDRWG-A--SVPLGYFPDTFGNM-GQ-TPQLM 159 (923)
T ss_dssp HHHHHHHHHTTSEECC--SBSSCBCS----TTSCHHHHHHHHHHHHHHHHHHT-C--CCSSEEESSCSSBC-TT-HHHHH
T ss_pred HHHHHHHHHcCCEEEe--eeeecccc----ccCCHHHHHHHHHHHHHHHHHcC-C--CCceeEecCCCCcc-hH-HHHHH
Confidence 47899999999 5773 55 33321 23689999999999999998642 2 23356665 77764 33 78899
Q ss_pred HHcCCeEeeecc
Q psy16052 303 EEQAFLYDSTIT 314 (476)
Q Consensus 303 ~~~G~~Ydss~~ 314 (476)
+..||.|-....
T Consensus 160 ~~~Gi~~~~~~R 171 (923)
T 2wyh_A 160 LKAGLQAAAFGR 171 (923)
T ss_dssp HTTTCCEEEECS
T ss_pred HHcCCCEEEEEe
Confidence 999997765543
Done!