Your job contains 1 sequence.
>psy16052
ATEAIRVKRQEETSTKKEESFEHELCKDKDAGEWFRLVAGEGDNCRDVIQCTSSGLQAIR
CPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGL
FCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFCSEDGTYIPGDLPSKEVPQM
ITITFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKYTNYSAVQELHRKGHEVA
VHSITHNDDENFWSNATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFT
MMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPHRCHGNLQHCPTRSHAVWEMVMNELDRR
EDPNFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAWLKNNPE
FLDAFLYWVDEIIERHKDVYFVTMTQVIQWIQNPRTITEVKNFDPWREKCAVEEAI
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16052
(476 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0260653 - symbol:serp "serpentine" species:7227 "D... 2310 1.2e-239 1
FB|FBgn0261341 - symbol:verm "vermiform" species:7227 "Dr... 1593 1.2e-163 1
FB|FBgn0032598 - symbol:ChLD3 "ChLD3" species:7227 "Droso... 1116 4.1e-113 1
FB|FBgn0051973 - symbol:Cda5 "Chitin deacetylase-like 5" ... 666 1.5e-67 2
FB|FBgn0052499 - symbol:Cda4 "Chitin deacetylase-like 4" ... 679 8.2e-67 1
WB|WBGene00002983 - symbol:lgx-1 species:6239 "Caenorhabd... 570 1.2e-55 2
FB|FBgn0034197 - symbol:Cda9 "Chitin deacetylase-like 9" ... 551 3.0e-53 1
WB|WBGene00018607 - symbol:F48E3.8b species:6239 "Caenorh... 508 6.9e-51 3
UNIPROTKB|F1S1W0 - symbol:LRP2 "Uncharacterized protein" ... 130 3.9e-06 1
UNIPROTKB|F1M1B5 - symbol:F1M1B5 "Uncharacterized protein... 136 6.3e-06 1
UNIPROTKB|F1LZE5 - symbol:Lrp1b "Protein Lrp1b" species:1... 137 1.6e-05 1
UNIPROTKB|F1SMJ6 - symbol:C9 "Uncharacterized protein" sp... 131 2.3e-05 1
WB|WBGene00018547 - symbol:clec-78 species:6239 "Caenorha... 128 3.8e-05 1
UNIPROTKB|E9PC35 - symbol:LRP2 "Low-density lipoprotein r... 132 5.1e-05 2
UNIPROTKB|F1NCJ6 - symbol:F1NCJ6 "Uncharacterized protein... 129 6.2e-05 1
UNIPROTKB|F1P4K2 - symbol:SORL1 "Sortilin-related recepto... 132 9.1e-05 1
UNIPROTKB|Q98930 - symbol:SORL1 "Sortilin-related recepto... 132 9.1e-05 1
UNIPROTKB|Q9DFH4 - symbol:LRP6 "LDL receptor-related prot... 118 0.00011 1
UNIPROTKB|F1MLA7 - symbol:F1MLA7 "Uncharacterized protein... 136 0.00012 1
UNIPROTKB|E1BUD4 - symbol:SORL1 "Sortilin-related recepto... 132 0.00012 1
UNIPROTKB|F1NCJ5 - symbol:F1NCJ5 "Uncharacterized protein... 126 0.00014 1
UNIPROTKB|P98157 - symbol:LRP1 "Low-density lipoprotein r... 134 0.00017 1
WB|WBGene00019811 - symbol:egg-2 species:6239 "Caenorhabd... 124 0.00018 1
ZFIN|ZDB-GENE-040426-803 - symbol:vldlr "very low density... 126 0.00020 1
UNIPROTKB|F1MKZ6 - symbol:LRP1B "Uncharacterized protein"... 129 0.00021 1
UNIPROTKB|P98164 - symbol:LRP2 "Low-density lipoprotein r... 132 0.00026 2
UNIPROTKB|Q07954 - symbol:LRP1 "Prolow-density lipoprotei... 132 0.00028 1
ZFIN|ZDB-GENE-070912-401 - symbol:lrp1bb "low density lip... 125 0.00032 3
ZFIN|ZDB-GENE-030131-7126 - symbol:lrp1b "low density lip... 131 0.00036 1
ZFIN|ZDB-GENE-030131-6015 - symbol:si:dkey-88l16.3 "si:dk... 126 0.00046 1
UNIPROTKB|E1BGJ0 - symbol:LRP1 "Uncharacterized protein" ... 130 0.00046 1
UNIPROTKB|P98167 - symbol:SSPO "SCO-spondin" species:9913... 136 0.00048 2
ZFIN|ZDB-GENE-050119-2 - symbol:lrp2a "low density lipopr... 129 0.00061 1
UNIPROTKB|F1NCJ7 - symbol:F1NCJ7 "Uncharacterized protein... 118 0.00078 1
MGI|MGI:96828 - symbol:Lrp1 "low density lipoprotein rece... 127 0.00097 1
>FB|FBgn0260653 [details] [associations]
symbol:serp "serpentine" species:7227 "Drosophila
melanogaster" [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0006030 "chitin metabolic process" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0035159
"regulation of tube length, open tracheal system" evidence=IMP]
[GO:0008061 "chitin binding" evidence=IMP] [GO:0004099 "chitin
deacetylase activity" evidence=IMP] [GO:0007424 "open tracheal
system development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR002172 InterPro:IPR002509
InterPro:IPR002557 InterPro:IPR011330 Pfam:PF00057 Pfam:PF01522
Pfam:PF01607 PROSITE:PS50068 PROSITE:PS50940 SMART:SM00192
SMART:SM00494 GO:GO:0005737 GO:GO:0005576 GO:GO:0005975
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0008061 Gene3D:3.20.20.370 SUPFAM:SSF88713
GO:GO:0035159 GO:GO:0004099 Gene3D:2.170.140.10 SUPFAM:SSF57625
GO:GO:0006030 HSSP:Q07954 eggNOG:NOG134912 EMBL:BT003524
ProteinModelPortal:Q86P23 SMR:Q86P23 STRING:Q86P23 PaxDb:Q86P23
PRIDE:Q86P23 FlyBase:FBgn0260653 InParanoid:Q86P23
OrthoDB:EOG45X6B6 ChiTaRS:serp ArrayExpress:Q86P23 Bgee:Q86P23
Uniprot:Q86P23
Length = 541
Score = 2310 (818.2 bits), Expect = 1.2e-239, P = 1.2e-239
Identities = 412/470 (87%), Positives = 432/470 (91%)
Query: 5 IRVKRQXXXXXXXXXXXXXX-LCKDKDAGEWFRLVAGEGDNCRDVIQCTSSGLQAIRCPA 63
+R KRQ LCKDKDAGEWFRLVAGEGDNCRDVIQCTSSGLQAIRCPA
Sbjct: 26 LRYKRQATTEETKKEESFEKELCKDKDAGEWFRLVAGEGDNCRDVIQCTSSGLQAIRCPA 85
Query: 64 GLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCN 123
GLYFDIEKQTCDWK +VKNCK KNKER+VKPLL+TDEPLCQDGFLACGDG CIERGLFCN
Sbjct: 86 GLYFDIEKQTCDWKKSVKNCKSKNKERRVKPLLHTDEPLCQDGFLACGDGNCIERGLFCN 145
Query: 124 GEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFCSEDGTYIPGDLPSKEVPQMITI 183
GEKDC+DGSDENTCD +NDPNRAPPCDPAVCVLPDCFCSEDGT IPGDLP+K+VP MITI
Sbjct: 146 GEKDCSDGSDENTCDIDNDPNRAPPCDPAVCVLPDCFCSEDGTSIPGDLPAKDVPMMITI 205
Query: 184 TFDDAINNNNIALYKEMFNGKRKNPNGCDIKATFFVSHKYTNYSAVQELHRKGHEVAVHS 243
TFDDAINNNNI LYKE+F RKNPNGC IKAT+FVSHKYTNYSAVQE RKGHE+AVHS
Sbjct: 206 TFDDAINNNNIELYKEIFKD-RKNPNGCSIKATYFVSHKYTNYSAVQETARKGHEIAVHS 264
Query: 244 ITHNDDENFWSNATVDDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMME 303
ITHND+E FWSNATVDDWAKEMAGMRII EK+AN++DNSVVGVRAPYLRVGGNNQFTMME
Sbjct: 265 ITHNDEERFWSNATVDDWAKEMAGMRIITEKFANITDNSVVGVRAPYLRVGGNNQFTMME 324
Query: 304 EQAFLYDSTITAPLSNPPLWPYTMYFRMPHRCHGNLQHCPTRSHAVWEMVMNELDRREDP 363
EQAFLYDSTITAPLSNPPLWPYTMYFRMPHRCHGNLQ CPTRSHAVWEMVMNELDRREDP
Sbjct: 325 EQAFLYDSTITAPLSNPPLWPYTMYFRMPHRCHGNLQSCPTRSHAVWEMVMNELDRREDP 384
Query: 364 NFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAWLKNNPEFLD 423
DEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAWLKNNPEFLD
Sbjct: 385 VNDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAWLKNNPEFLD 444
Query: 424 AFLYWVDEIIERHKDVYFVTMTQVIQWIQNPRTITEVKNFDPWREKCAVE 473
AFLYW+DEI+ H DVYFVTMTQVIQW+QNPRTI+EVKNF+PWREKC VE
Sbjct: 445 AFLYWIDEILANHNDVYFVTMTQVIQWMQNPRTISEVKNFEPWREKCVVE 494
>FB|FBgn0261341 [details] [associations]
symbol:verm "vermiform" species:7227 "Drosophila
melanogaster" [GO:0005041 "low-density lipoprotein receptor
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0006030 "chitin metabolic process" evidence=IEA]
[GO:0007424 "open tracheal system development" evidence=IMP]
[GO:0035159 "regulation of tube length, open tracheal system"
evidence=IMP] [GO:0008061 "chitin binding" evidence=IMP]
[GO:0004099 "chitin deacetylase activity" evidence=IMP] [GO:0035001
"dorsal trunk growth, open tracheal system" evidence=IMP]
[GO:0060439 "trachea morphogenesis" evidence=IMP] [GO:0007632
"visual behavior" evidence=IMP] InterPro:IPR002172
InterPro:IPR002509 InterPro:IPR002557 InterPro:IPR011330
Pfam:PF00057 Pfam:PF01607 PROSITE:PS50068 PROSITE:PS50940
SMART:SM00192 SMART:SM00494 GO:GO:0005576 EMBL:AE014296
GO:GO:0005975 GO:GO:0060439 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0008061 Gene3D:3.20.20.370
SUPFAM:SSF88713 GO:GO:0035159 GO:GO:0007632 GO:GO:0004099
Gene3D:2.170.140.10 SUPFAM:SSF57625 GO:GO:0006030 GO:GO:0035001
GeneTree:ENSGT00530000064558 RefSeq:NP_001163469.1 UniGene:Dm.11517
ProteinModelPortal:E1JI40 SMR:E1JI40 EnsemblMetazoa:FBtr0302333
GeneID:40149 KEGG:dme:Dmel_CG8756 CTD:40149 FlyBase:FBgn0261341
OMA:ERFANIT PhylomeDB:E1JI40 GenomeRNAi:40149 NextBio:817253
Bgee:E1JI40 Uniprot:E1JI40
Length = 555
Score = 1593 (565.8 bits), Expect = 1.2e-163, P = 1.2e-163
Identities = 271/455 (59%), Positives = 352/455 (77%)
Query: 25 LCKDKDAGEWFRLVAGEGDNCRDVIQCTSSG------LQAIRCPAGLYFDIEKQTCDWKG 78
+C D+ A E+FRL +GD CR+V +C S+G L IRC GL FD+ +Q CDWK
Sbjct: 56 VCADRPADEYFRLET-DGD-CREVYRCDSAGEDGTWRLAPIRCAGGLAFDVLRQLCDWKS 113
Query: 79 AVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCD 138
VK+C + K RK KP+L TDEP+C +G L+CGDG C+++ LFCNG+ DC D SDEN C
Sbjct: 114 NVKSCDVLEKPRKAKPILKTDEPICPEGKLSCGDGECLDKELFCNGKSDCKDESDENACS 173
Query: 139 SENDPNRAPPCDPAVCVLPDCFCSEDGTYIPGDLPSKEVPQMITITFDDAINNNNIALYK 198
+ DPNRAP CDP C LPDCFCS DGT IPG + ++VPQMITITF+ A+N +NI LY+
Sbjct: 174 VDEDPNRAPECDPTQCALPDCFCSADGTRIPGGIEPQQVPQMITITFNGAVNVDNIDLYE 233
Query: 199 EMFNGKRKNPNGCDIKATFFVSHKYTNYSAVQELHRKGHEVAVHSITHNDDENFWSNATV 258
++FNG+R+NPNGC IK TFFVSHKYTNYSAVQ+LHR+GHE++V S+TH DD N+W+ +
Sbjct: 234 DIFNGQRQNPNGCSIKGTFFVSHKYTNYSAVQDLHRRGHEISVFSLTHKDDPNYWTGGSY 293
Query: 259 DDWAKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLS 318
DDW EMAG R+I E++AN++D S++G+RAPYLRVGGN QF MM +Q F+YD++ITA L
Sbjct: 294 DDWLAEMAGSRLIVERFANITDGSIIGMRAPYLRVGGNKQFEMMADQFFVYDASITASLG 353
Query: 319 NPPLWPYTMYFRMPHRCHGNLQHCPTRSHAVWEMVMNELDRREDPNFDEYLPGCAMVDSC 378
P+WPYT+YFRMPH+C+GN +CP+RSH VWEMVMNELDRR+DP FDE LPGC MVDSC
Sbjct: 354 RVPIWPYTLYFRMPHKCNGNAHNCPSRSHPVWEMVMNELDRRDDPTFDESLPGCHMVDSC 413
Query: 379 SNILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAWLKNNPEFLDAFLYWVDEIIERHKD 438
SN+ +GDQF L HNF+RHY+ NRAPLGL+FHA+WLK+ E+ D + +++E++ R+ D
Sbjct: 414 SNVASGDQFARLLRHNFNRHYNSNRAPLGLHFHASWLKSKKEYRDELIKFIEEMLGRN-D 472
Query: 439 VYFVTMTQVIQWIQNPRTITEVKNFDPWREKCAVE 473
V+FVT QVIQW+QNP + +++F W+EKC V+
Sbjct: 473 VFFVTNLQVIQWMQNPTELNSLRDFQEWKEKCDVK 507
>FB|FBgn0032598 [details] [associations]
symbol:ChLD3 "ChLD3" species:7227 "Drosophila melanogaster"
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0008061 "chitin binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0006030 "chitin metabolic
process" evidence=IEA] [GO:0016810 "hydrolase activity, acting on
carbon-nitrogen (but not peptide) bonds" evidence=IEA]
InterPro:IPR002172 InterPro:IPR002509 InterPro:IPR002557
InterPro:IPR011330 Pfam:PF00057 Pfam:PF01607 PROSITE:PS50068
PROSITE:PS50940 SMART:SM00192 SMART:SM00494 GO:GO:0005576
EMBL:AE014134 GO:GO:0005975 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0008061 Gene3D:3.20.20.370
SUPFAM:SSF88713 GO:GO:0016810 CAZy:CBM14 Gene3D:2.170.140.10
SUPFAM:SSF57625 GO:GO:0006030 HSSP:P98162
GeneTree:ENSGT00530000064558 eggNOG:NOG05074 EMBL:AY118355
RefSeq:NP_609806.1 UniGene:Dm.23210 SMR:Q9VJI8 STRING:Q9VJI8
EnsemblMetazoa:FBtr0080892 GeneID:35002 KEGG:dme:Dmel_CG17905
UCSC:CG17905-RA CTD:35002 FlyBase:FBgn0032598 InParanoid:Q9VJI8
OMA:EDWFDEM OrthoDB:EOG4RBP0R GenomeRNAi:35002 NextBio:791336
Uniprot:Q9VJI8
Length = 577
Score = 1116 (397.9 bits), Expect = 4.1e-113, P = 4.1e-113
Identities = 207/426 (48%), Positives = 277/426 (65%)
Query: 45 CRDVIQCTSSGLQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQ 104
C C + +C GL FD+ +Q CD+K V NC + + KPLL + C
Sbjct: 111 CAKYFLCLDGEVFEFKCSEGLLFDVVRQICDFKANVDNCDVSAETPAPKPLLEMAD--CA 168
Query: 105 DGF-LACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFCSE 163
D + L C DG C+ + FC+G DC DGSDE CD E+DPN A CDP C LP CFCS+
Sbjct: 169 DEYQLGCADGTCLPQEYFCDGSVDCPDGSDEGWCDVEHDPNAAGACDPRKCHLPQCFCSK 228
Query: 164 DGTYIPGDLPSKEVPQMITITFDDAINNNNIALY-KEMFNGKRKNPNGCDIKATFFVSHK 222
DGT IPG LP++ VPQMI +TFDDAIN++N L+ K +F R+NPNGC IK TF+VSH
Sbjct: 229 DGTQIPGSLPAQSVPQMILLTFDDAINHDNWELFSKVLFTQHRRNPNGCPIKGTFYVSHP 288
Query: 223 YTNYSAVQELHRKGHEVAVHSITHNDDENFWS-NATVDDWAKEMAGMRIIAEKYANLSDN 281
+TNY VQ+L GHE+AVHS+TH E +WS NAT++DW EM G I K+A +
Sbjct: 289 FTNYQYVQKLWNDGHEIAVHSVTHRGPEMWWSKNATIEDWFDEMVGQANIINKFAAVRME 348
Query: 282 SVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPHRCHGNLQH 341
+ G+R P+LRVG N QF MM+E F+YDS++ AP SNPPLWPYT+ ++MPH C G Q+
Sbjct: 349 EIRGMRVPFLRVGWNRQFLMMKEFGFVYDSSMVAPHSNPPLWPYTLDYKMPHSCTGVNQN 408
Query: 342 CPTRSH-AVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYD 400
CP+RS+ +WE+VMN+L+ EY+ C MVD+C L+G+ Y L HNF RHY
Sbjct: 409 CPSRSYPGIWELVMNQLE------VGEYM--CGMVDTCPPHLSGEDVYRMLTHNFKRHYL 460
Query: 401 QNRAPLGLYFHAAWLKNNPEFLDAFLYWVDEIIERHKDVYFVTMTQVIQWIQNPRTITEV 460
NRAP GLYFH+ W K ++L+AFL ++D++ ++ DV+FVT Q IQW+++P ++
Sbjct: 461 SNRAPFGLYFHSTWFKK-VDYLNAFLKFLDDL-QKLPDVFFVTNQQAIQWMRHPTPSNQL 518
Query: 461 KNFDPW 466
F+ W
Sbjct: 519 HQFESW 524
>FB|FBgn0051973 [details] [associations]
symbol:Cda5 "Chitin deacetylase-like 5" species:7227
"Drosophila melanogaster" [GO:0008061 "chitin binding"
evidence=IEA] [GO:0006030 "chitin metabolic process" evidence=IEA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0016810 "hydrolase activity, acting on carbon-nitrogen (but not
peptide) bonds" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR002509 InterPro:IPR002557
InterPro:IPR011330 Pfam:PF01522 Pfam:PF01607 PROSITE:PS50940
SMART:SM00494 GO:GO:0005576 EMBL:AE014134 GO:GO:0005975
GO:GO:0008061 Gene3D:3.20.20.370 SUPFAM:SSF88713 GO:GO:0016810
Gene3D:2.170.140.10 SUPFAM:SSF57625 GO:GO:0006030
GeneTree:ENSGT00530000064558 UniGene:Dm.14310 GeneID:33158
KEGG:dme:Dmel_CG31973 CTD:33158 FlyBase:FBgn0051973
GenomeRNAi:33158 NextBio:782188 RefSeq:NP_722590.2
ProteinModelPortal:Q9VPI3 DIP:DIP-17623N IntAct:Q9VPI3
EnsemblMetazoa:FBtr0078164 UCSC:CG31973-RB InParanoid:Q9VPI3
PhylomeDB:Q9VPI3 ArrayExpress:Q9VPI3 Bgee:Q9VPI3 Uniprot:Q9VPI3
Length = 1998
Score = 666 (239.5 bits), Expect = 1.5e-67, Sum P(2) = 1.5e-67
Identities = 130/327 (39%), Positives = 199/327 (60%)
Query: 143 PNR-APPCDPAVCVLPDCFCSEDGTYIPGDLPSKEVPQMITITFDDAINNNNIALYKEMF 201
P++ A C VC+LPDC+C G IPG+LP + +PQ++ +TFDD++N+ N LY ++F
Sbjct: 1630 PDKTAAKCRKDVCLLPDCYCG--GRDIPGELPVESIPQIVLLTFDDSVNDLNKQLYTDLF 1687
Query: 202 NGKRKNPNGCDIKATFFVSHKYTNYSAVQELHRKGHEVAVHSITHNDDENFWSNATVDDW 261
R NPNGC I ATF+VSH++T+YS VQ L+ GHE+A H+++H+ E F + W
Sbjct: 1688 EKGRVNPNGCPITATFYVSHEWTDYSQVQNLYADGHEMASHTVSHSFGEQF----SQKKW 1743
Query: 262 AKEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLSNPP 321
+E+AG R I Y + + V G+RAP+L VGGN + M+ + F YDS++ + PP
Sbjct: 1744 TREIAGQREILAAYGGVKMSDVRGMRAPFLSVGGNKMYKMLYDSNFTYDSSMPVYENRPP 1803
Query: 322 LWPYTMYFRMPHRCHGNLQHCPTRSH-AVWEMVMNELDRREDPNFDEYLPGCAMVDSCSN 380
WPYT+ +++ H C + CPTRS+ VW++ M +D N C+M D+CSN
Sbjct: 1804 SWPYTLDYKIFHDCM--IPPCPTRSYPGVWQVPMVMW---QDLNGGR----CSMGDACSN 1854
Query: 381 ILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAWLKNNPEFLDAFLYWVDEIIERHKDVY 440
D + NF+RHY NRAP GL++HAAW P + F+ ++D I +DV+
Sbjct: 1855 PSDADGVTKMIMKNFERHYTTNRAPFGLFYHAAWF-TQPHHKEGFIKFLDAI-NAMQDVW 1912
Query: 441 FVTMTQVIQWIQNPRTITEVKNFDPWR 467
+T Q +QW+++P I+ + +F P++
Sbjct: 1913 IITNWQALQWVRDPTPISRINSFQPFQ 1939
Score = 67 (28.6 bits), Expect = 1.5e-67, Sum P(2) = 1.5e-67
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 44 NCRDVIQCTSSGLQAIRCPAGLYFDIEKQTCDWKGAVKNCKL 85
+C C G C GL + + QTCDW V C+L
Sbjct: 70 DCTQYYVCVFGGALLESCTGGLMYSHDLQTCDWPRNV-GCEL 110
>FB|FBgn0052499 [details] [associations]
symbol:Cda4 "Chitin deacetylase-like 4" species:7227
"Drosophila melanogaster" [GO:0016810 "hydrolase activity, acting
on carbon-nitrogen (but not peptide) bonds" evidence=IEA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0006030
"chitin metabolic process" evidence=IEA] [GO:0008061 "chitin
binding" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR002509 InterPro:IPR002557 InterPro:IPR011330
Pfam:PF01607 PROSITE:PS50940 SMART:SM00494 GO:GO:0005576
GO:GO:0022008 GO:GO:0005975 EMBL:AE014298 GO:GO:0008061
Gene3D:3.20.20.370 SUPFAM:SSF88713 GO:GO:0016810 CAZy:CBM14
Gene3D:2.170.140.10 SUPFAM:SSF57625 GO:GO:0006030
GeneTree:ENSGT00530000064558 EMBL:AY113493 RefSeq:NP_728468.1
UniGene:Dm.13386 SMR:Q9VR69 STRING:Q9VR69
EnsemblMetazoa:FBtr0077362 GeneID:33144 KEGG:dme:Dmel_CG32499
UCSC:CG32499-RA CTD:33144 FlyBase:FBgn0052499 eggNOG:NOG87371
InParanoid:Q9VR69 OMA:PFLKPGR OrthoDB:EOG45QFVF ChiTaRS:Cda4
GenomeRNAi:33144 NextBio:782146 Uniprot:Q9VR69
Length = 486
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 148/393 (37%), Positives = 222/393 (56%)
Query: 97 YTDEPLCQDGFLACGDG-ACIER---GLFCNG-EKDCNDGSDENTCD---------SEND 142
Y D C+ F C DG + R GLF + +K C DE C +E
Sbjct: 37 YADPATCRR-FYQCVDGYPYLNRCPSGLFFDDVQKFCTF-KDEAKCGPLPTTPAPATEAP 94
Query: 143 PNRAPPCDPAVCVLPDCFCSEDGTYIPGDLPSKEVPQMITITFDDAINNNNIALYKEMFN 202
+ A C+ C LP CFCS+DGT IPGDL +++PQ+I +TFD A+N NN Y+++F+
Sbjct: 95 ADTAQRCNTENCALPYCFCSKDGTQIPGDLEPEKIPQIIMLTFDGAVNLNNYQHYQKIFD 154
Query: 203 GKRKNPNGCDIKATFFVSHKYTNYSAVQELHRKGHEVAVHSITHNDDENFWSNATVDDWA 262
GKRKNPNGC I+ TFF+SH+Y+NY +Q L GHE+ SI+ + ++W
Sbjct: 155 GKRKNPNGCLIRGTFFMSHEYSNYQQIQHLGYYGHEIGTESISQQQG---LQDKGYEEWV 211
Query: 263 KEMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLSNPPL 322
EM GMR I +AN+S N VVG+RAP+L+ G N Q+ ++E+ ++YDS+IT P P+
Sbjct: 212 GEMIGMREILRHFANVSVNDVVGMRAPFLKPGRNTQYKVLEDFGYIYDSSITVPPVPVPV 271
Query: 323 WPYTMYFRMPHRCHGNLQHCPTRSH-AVWEMVMNELDRREDPNFDEYLPG-CAMVDSCS- 379
WPYT+ +++ H C CP+R+ VWE+ +N + Y G C +D C
Sbjct: 272 WPYTLDYKISHECKSGT--CPSRTFPGVWEVPLNT------HYVEGYEGGHCPYLDQCVL 323
Query: 380 NILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAWLKNNP--EFLDAFLYWVDEIIERHK 437
+ L ++ + +L +F R+Y+QN+AP + FH W + P L FL W E+
Sbjct: 324 HNLDEEEVFQWLQEDFSRYYEQNKAPYMMPFHTNWFQTKPLENGLHKFLDWALEL----P 379
Query: 438 DVYFVTMTQVIQWIQNPRTITEVKNFDPWREKC 470
DVY +T+TQ++Q++ +P+ + +V + W KC
Sbjct: 380 DVYILTVTQMLQYVTDPKELRDVSQIESW--KC 410
>WB|WBGene00002983 [details] [associations]
symbol:lgx-1 species:6239 "Caenorhabditis elegans"
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0016810 "hydrolase activity, acting on carbon-nitrogen (but not
peptide) bonds" evidence=IEA] InterPro:IPR000742 InterPro:IPR002509
InterPro:IPR011330 Pfam:PF01522 SMART:SM00181 GO:GO:0005975
InterPro:IPR006149 Pfam:PF01683 Gene3D:3.20.20.370 SUPFAM:SSF88713
GO:GO:0016810 InterPro:IPR006150 SMART:SM00289
GeneTree:ENSGT00530000064558 EMBL:FO080821 GeneID:180825
KEGG:cel:CELE_C54G7.3 CTD:180825 RefSeq:NP_741795.2 PRIDE:H2KZ94
EnsemblMetazoa:C54G7.3a.1 EnsemblMetazoa:C54G7.3a.2
WormBase:C54G7.3a Uniprot:H2KZ94
Length = 1884
Score = 570 (205.7 bits), Expect = 1.2e-55, Sum P(2) = 1.2e-55
Identities = 134/373 (35%), Positives = 198/373 (53%)
Query: 103 CQDGFLACGDGACIERGLFCNG-EKDCNDGSDENTC----DSENDPNR--APPCDPAVCV 155
C +G C D E G +C E + N S PNR A C+ A C
Sbjct: 1458 CFEGMCTCDDHHFAEDG-YCRPIEARSSKVQFVNGAGLRFSSMQVPNRQRAQACNEAECK 1516
Query: 156 LPDCFCSEDGTYIPGDLPSKEVPQMITITFDDAINNNNIALYKEMF-NGKRKNPNGCDIK 214
LP+CFC+E+G PG L E PQ + +TFDDA+N + YK++F N KNPNGCD+K
Sbjct: 1517 LPNCFCTENGRRAPGGLRPDETPQFVVLTFDDAVNGKTFSDYKKLFENDVLKNPNGCDVK 1576
Query: 215 ATFFVSHKYTNYSAVQELHRKGHEVAVHSITHNDDENFWSNATVDDWAKEMAGMRIIAEK 274
ATFF+SH++TNY AV L +K E+A +SI+H EN A + W EM G R I K
Sbjct: 1577 ATFFISHEWTNYDAVNWLVQKNMEIASNSISHESLEN----ANTNRWLNEMDGQRRILAK 1632
Query: 275 YANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITA-P-LSNPPLWPYTMYFRMP 332
+ + +VG+R+P L +GG+NQF MM FL+D++++A P + P WP TM +++
Sbjct: 1633 FGGAPEEEIVGIRSPQLALGGDNQFEMMIGAEFLWDNSMSANPGIHGEPFWPQTMDYQVA 1692
Query: 333 HRCHGNLQHCPTRSH-AVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFL 391
C N CP S VW + +N+ D + + + T D+ +
Sbjct: 1693 WDC--NEASCPKSSFPGVWSVPLNQFYGSYMSQIDSFRRSSMLRAAVDLNNTVDELEEII 1750
Query: 392 NHNFDRHYDQNRAPLGLYFHAAWLK--NNPEFLDAFLYWVDEIIERHKDVYFVTMTQVIQ 449
NF+R Y NRAP L +A +L+ + + + A +++ + KDVY VT+ Q+I
Sbjct: 1751 TRNFERSYSANRAPYVLSLNADFLQLGGHNKGMKAVQKFLNRM-SAQKDVYIVTIKQLID 1809
Query: 450 WIQNPRTITEVKN 462
W++ P I+E+K+
Sbjct: 1810 WMKRPVPISEMKS 1822
Score = 50 (22.7 bits), Expect = 1.2e-55, Sum P(2) = 1.2e-55
Identities = 25/109 (22%), Positives = 38/109 (34%)
Query: 41 EGDNCRDVIQCTSSGLQAIR------CPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKP 94
+GD R + C G+ I CP + FD Q C K K + K++ +
Sbjct: 38 DGDE-RAFMSCQGVGVGTIGFWERKLCPNNMVFDFINQHC--KEQKKKAR---KQQNLSI 91
Query: 95 LLYTDEPLCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDP 143
+ + C +G G C L C D +C+S P
Sbjct: 92 AILNNS--CANGETCIGGSVCDLDTLRCMCPYGTTPKLDTLSCESSQPP 138
Score = 41 (19.5 bits), Expect = 1.0e-54, Sum P(2) = 1.0e-54
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 112 DGACIERGLFCNGEKDCNDGS 132
D C GL C G C + S
Sbjct: 825 DDECTAIGLICKGNTVCRNKS 845
Score = 38 (18.4 bits), Expect = 2.2e-54, Sum P(2) = 2.2e-54
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 98 TDEPLCQDGFLACGDGACI-ERGL 120
T +C++G+ C D + I RG+
Sbjct: 642 TGGSVCREGWCICPDPSMIVNRGI 665
>FB|FBgn0034197 [details] [associations]
symbol:Cda9 "Chitin deacetylase-like 9" species:7227
"Drosophila melanogaster" [GO:0016810 "hydrolase activity, acting
on carbon-nitrogen (but not peptide) bonds" evidence=IEA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
InterPro:IPR002509 InterPro:IPR011330 Pfam:PF01522 EMBL:AE013599
GO:GO:0005975 Gene3D:3.20.20.370 SUPFAM:SSF88713 GO:GO:0016810
EMBL:BT088821 RefSeq:NP_611192.1 UniGene:Dm.26948
EnsemblMetazoa:FBtr0086984 GeneID:36934 KEGG:dme:Dmel_CG15918
UCSC:CG15918-RA CTD:36934 FlyBase:FBgn0034197 eggNOG:NOG236282
GeneTree:ENSGT00530000064558 InParanoid:A1ZAQ7 OMA:FLSHEYT
OrthoDB:EOG4R4XJ7 GenomeRNAi:36934 NextBio:801108 Uniprot:A1ZAQ7
Length = 397
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 111/315 (35%), Positives = 174/315 (55%)
Query: 146 APPCDPAVCVLPDCFCSEDGTYIPGDLPSKE--VPQMITITFDDAINNNNIALYKEMFNG 203
A PC P+ C LPDC CS D KE +PQ +TITFDDA+N N A Y+ +F+G
Sbjct: 39 AEPCKPSKCKLPDCRCS-DAALPTSKFQGKENQIPQFVTITFDDAVNAVNFAQYELLFDG 97
Query: 204 KRKNPNGCDIKATFFVSHKYTNYSAVQELHRKGHEVAVHSITHNDDENFWSNATVDDWAK 263
NP+GC TFF+SH+YT+Y V L+R GHE+A+HS+TH D ++W +A V +
Sbjct: 98 LI-NPDGCGAAGTFFLSHEYTDYVRVNALYRAGHEIALHSVTHGDGTDYWRSADVPTIER 156
Query: 264 EMAGMRIIAEKYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTI-TAPLSNPPL 322
E + E +A ++ + G+R P+L++ GNN F YDS+ T +P +
Sbjct: 157 EFGAQLKMLETFAKVNPKKIQGMRLPFLQISGNNTFEAARRLGLTYDSSWPTQKFKDPAM 216
Query: 323 WPYTMYFRMPHRCHGNLQHCPTRS-HAVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNI 381
WPYT+ ++ C + CP S W +N + D + Y C+M+D+C
Sbjct: 217 WPYTLDYKSKQDCQ--IGPCPEASIPGFW---VNPMVTWTDT--EGY--SCSMIDACVYP 267
Query: 382 LTGD--QFYNFLNHNFDRHYDQNRAPLGLYFHAAWLKNNPEFLDAFLYWVDEIIERHKDV 439
D + ++++ NF+RHY NRAP G+Y HAAW + AF +++ + + DV
Sbjct: 268 PEDDMDELFDWMMENFNRHYLGNRAPFGMYLHAAWFSRGRNYFGAFKKFINHL-NTYSDV 326
Query: 440 YFVTMTQVIQWIQNP 454
YF +++++++++ P
Sbjct: 327 YFTGISRMLEYVRKP 341
>WB|WBGene00018607 [details] [associations]
symbol:F48E3.8b species:6239 "Caenorhabditis elegans"
[GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR000742 InterPro:IPR002509 InterPro:IPR011330
SMART:SM00181 GO:GO:0005975 InterPro:IPR013032 InterPro:IPR006149
Pfam:PF01683 PROSITE:PS01186 Gene3D:3.20.20.370 SUPFAM:SSF88713
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0016810 InterPro:IPR006150
SMART:SM00289 GeneTree:ENSGT00530000064558 EMBL:FO081393
RefSeq:NP_741840.2 UniGene:Cel.23156 ProteinModelPortal:A8WFH5
SMR:A8WFH5 PRIDE:A8WFH5 EnsemblMetazoa:F48E3.8a GeneID:181010
KEGG:cel:CELE_F48E3.8 UCSC:F48E3.8a CTD:181010 WormBase:F48E3.8a
HOGENOM:HOG000015719 InParanoid:A8WFH5 OMA:CIQDQCQ NextBio:911968
ArrayExpress:A8WFH5 Uniprot:A8WFH5
Length = 2444
Score = 508 (183.9 bits), Expect = 6.9e-51, Sum P(3) = 6.9e-51
Identities = 110/319 (34%), Positives = 171/319 (53%)
Query: 154 CVLPDCFCSEDGTYIPGDLPSKEVPQMITITFDDAINNNNIALYKEMFNGKRKNPNGCDI 213
C LP CFC+ G P + +K+VPQM+ ++FDD I + I K +F+G +NPNGC I
Sbjct: 2100 CRLPSCFCTSTGKIPPNNFDTKQVPQMVMLSFDDPITDRIINTLKSLFSGSIRNPNGCAI 2159
Query: 214 KATFFVSHKYTNYSAVQELHRKGHEVAVHSITHNDDENFWSNATVDDWAKEMAGMRIIAE 273
K TFFVSH++ NY LH HE+ V+SIT D S T + W KE GMR
Sbjct: 2160 KGTFFVSHQWNNYDQSLWLHSTNHEIGVNSITRED----LSGRTQERWYKEQKGMRETLA 2215
Query: 274 KYANLSDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPH 333
+++ + + ++G RAP L++GG+ Q+ MM E F +D+++ L + P WP T+ ++
Sbjct: 2216 EFSFIDRSHIIGTRAPELKIGGDAQYRMMSENNFTFDNSM---LVSSPYWPQTLDHKLAW 2272
Query: 334 RCHGNLQHCPTRSH-AVWEMVMNELDRREDPNFDEYLPGCAMVDSCSNILTGDQFYNFLN 392
C GN CPT+SH A+WE+ + + + + DS D L
Sbjct: 2273 ECDGN---CPTQSHKAIWEIPIQNIQANDTRWYKTLTRAMKPFDS------RDSVTKMLQ 2323
Query: 393 HNFDRHYDQNRAPLGLYFHAAWLKNNPE--FLDAFLYWVDEIIERHKDVYFVTMTQVIQW 450
NF HY NRAP L +L P+ + A ++ I+++ +DV+ VT +Q+I +
Sbjct: 2324 RNFMNHYKTNRAPFILTLDTEFLTYLPDNGAVYALRDFLKFIVQK-QDVFVVTGSQIIDY 2382
Query: 451 IQNPRTITEVKNFDPWREK 469
++NP + +K+ W+ K
Sbjct: 2383 MRNPVDLNNIKSLRSWQCK 2401
Score = 70 (29.7 bits), Expect = 7.7e-51, Sum P(2) = 7.7e-51
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 103 CQDGFLAC-GDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFC 161
C+DG + C G+ C C G + +G TC S N + P DP C L + C
Sbjct: 1445 CEDGTILCTGNSVCANNVCICPGGETVQNG----TCVSIN--TYSSPGDP--CDLTNTIC 1496
Query: 162 SEDGTYIPG 170
+ + I G
Sbjct: 1497 TGNSQCIDG 1505
Score = 60 (26.2 bits), Expect = 8.7e-50, Sum P(2) = 8.7e-50
Identities = 19/69 (27%), Positives = 28/69 (40%)
Query: 103 CQDGFLACGDGACIER-GL--FCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDC 159
C DG+ G CI R G EK+ + CD + ++ C+ VC P+
Sbjct: 908 CIDGYRIFGSTQCIPRPGKPKERKTEKESKLVELGDKCDKLSLCSKGAICEKGVCSCPET 967
Query: 160 FCSEDGTYI 168
F DG +
Sbjct: 968 FFESDGACV 976
Score = 59 (25.8 bits), Expect = 6.9e-51, Sum P(3) = 6.9e-51
Identities = 32/107 (29%), Positives = 43/107 (40%)
Query: 42 GDNCRDVIQCTSS--GL----QAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPL 95
G +C QC +S GL RCP GL FD K C G + ++ +KE V+
Sbjct: 231 GQDCIYSSQCQASFGGLVCDKNTCRCPNGLVFDGLK--CS-HGCPPHKRVIDKEICVEG- 286
Query: 96 LYTDEPLCQDGFLACGDGACIER---GLFCNGEKDCNDGS--DENTC 137
C G + G C+++ G C CN GS TC
Sbjct: 287 -------CPSGIVEVA-GRCVKQVSIGQPCVANAQCNFGSFCQSGTC 325
Score = 56 (24.8 bits), Expect = 2.3e-49, Sum P(2) = 2.3e-49
Identities = 18/63 (28%), Positives = 24/63 (38%)
Query: 102 LCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCD-SENDPNRAPPCDPAVCVLPDCF 160
+C D A C +G+ C G CN S + C EN N C V P
Sbjct: 549 ICIDQVSAKPGDTC-GKGIICEGGSYCNTDSGKCACRRGENSINGI--CKGFTFVYPGDL 605
Query: 161 CSE 163
C++
Sbjct: 606 CTD 608
Score = 54 (24.1 bits), Expect = 3.7e-49, Sum P(2) = 3.7e-49
Identities = 28/131 (21%), Positives = 49/131 (37%)
Query: 44 NCRDVIQCTSSGL---QAIRCPAGLYFD---IEKQTCDWKGAVKNCKLKNKERKVKPLLY 97
NC + IQC ++ + + +C G Y + C+ V++ N++ + +
Sbjct: 1527 NCGN-IQCGTNQICIQDSCQCRPGYYQQPGSCLQDRCNCIQEVESDSCLNRQCGMNQVCI 1585
Query: 98 TDEPLCQDGFLACGDGACIERGLFC-NGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVL 156
D+ C+ G+L + CI C D G N C + VC+
Sbjct: 1586 QDQCQCRSGYLVLQE-TCISDRCNCVQPSVDAISGGCMNQCGNNQ-----------VCIQ 1633
Query: 157 PDCFCSEDGTY 167
C C +G Y
Sbjct: 1634 DQCLC-RNGYY 1643
Score = 50 (22.7 bits), Expect = 9.8e-49, Sum P(2) = 9.8e-49
Identities = 17/65 (26%), Positives = 25/65 (38%)
Query: 98 TDEPLCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAP-PCDPAVCVL 156
T+ +C +GF C +G + G C E D N C S + C P + +
Sbjct: 1130 TNCSVCVNGFCRCPEGL-VHYGDKCVSEIDATKCLASNQCPSGAQCVKGECRCKPGLGIT 1188
Query: 157 PDCFC 161
FC
Sbjct: 1189 RYGFC 1193
Score = 50 (22.7 bits), Expect = 9.8e-49, Sum P(2) = 9.8e-49
Identities = 32/136 (23%), Positives = 51/136 (37%)
Query: 42 GDNCRDVIQCT-SSGLQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDE 100
G++C + QC +S C G+ F ++ C L+ + KP T
Sbjct: 688 GNSCNNEDQCLGNSTCMDNNCQCGIGF---------VASMDVCVLR---KTGKPNFLTPG 735
Query: 101 PLCQDGFLACGDGACIERGLFCNGEKD-------C---NDGSDENTCDSENDPNRAPPCD 150
LC + G CI +G+ C + D C N G + + C S +D C
Sbjct: 736 YLCNPEDICTGQSVCI-KGV-CQCQPDYKQMHNICVKKNIGIEGSPCSSRDDCGEGLMCG 793
Query: 151 PA-VCVLPDCFCSEDG 165
+ C P+ S +G
Sbjct: 794 ASGKCSCPEGLFSVNG 809
Score = 47 (21.6 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 13/58 (22%), Positives = 22/58 (37%)
Query: 103 CQDGFLACGDGACIERGLFCNGEKDCNDGS---DENTCDSENDPNRAPPCDPAVCVLP 157
C++G+ C + L C + N GS + C++ + C CV P
Sbjct: 2005 CRNGYCVCAKTNYSDSTLDCVSSINANQGSMAYPGSKCNATTSCQQNSSCFFGYCVTP 2062
Score = 45 (20.9 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
Identities = 9/35 (25%), Positives = 12/35 (34%)
Query: 114 ACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPP 148
+C G+ C G CN + D R P
Sbjct: 1783 SCQNNGMICRGGSSCNQNICQCAVGFSVDNGRCTP 1817
Score = 45 (20.9 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
Identities = 22/79 (27%), Positives = 29/79 (36%)
Query: 86 KNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNR 145
++K R P L TD D + G AC+ G+ C+G C G C P R
Sbjct: 406 QSKSRNSSPQL-TDVENDNDT-VPIGS-ACVRIGVTCDGGSVCVAGIC--VCPLGKTP-R 459
Query: 146 APPCDPAVCVLPDCFCSED 164
C V P C +
Sbjct: 460 NGVCIEHVAARPGTSCQNE 478
Score = 44 (20.5 bits), Expect = 2.5e-49, Sum P(3) = 2.5e-49
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 112 DGACIER-----GLFCNGEKDCNDGS----DENTCD 138
+G CIE G C E++C D S + N C+
Sbjct: 460 NGVCIEHVAARPGTSCQNEEECVDHSYCSPETNKCE 495
Score = 44 (20.5 bits), Expect = 4.2e-48, Sum P(2) = 4.2e-48
Identities = 14/64 (21%), Positives = 22/64 (34%)
Query: 103 CQDGFLACGDGACIERGLFCNGEKDCNDGSDE--NTCDSENDPNRAPPCDPAVCVLPDCF 160
C G + G+ C+ NG+ C DG E C + C + +
Sbjct: 520 CTMGEMCVGNSVCV------NGKCACVDGKVEINKICIDQVSAKPGDTCGKGIICEGGSY 573
Query: 161 CSED 164
C+ D
Sbjct: 574 CNTD 577
Score = 44 (20.5 bits), Expect = 4.2e-48, Sum P(2) = 4.2e-48
Identities = 29/128 (22%), Positives = 45/128 (35%)
Query: 60 RCPAGLYFDIEKQTC-DWKGAVKN-CKLKNKERKVKPLLYTDEP--LCQDGFLACGDGAC 115
RC G +C G + N C + L T P C + + G +C
Sbjct: 1857 RCSGGSSCSNSICSCPQGSGVLNNVCSPSFPQNDNYNLTRTARPGDSCDNTIVCIGGSSC 1916
Query: 116 IERGLFCNGEKDCNDGSDENTC---DSENDPNRAPP---C--DP-----AVCVLPDCFCS 162
+ C+ + SD ++C D N +R+ P C D ++C+ C C
Sbjct: 1917 LIGTCLCDSGYE--PSSDRSSCVLNDRYNVRSRSYPKTFCTFDSECTGGSICIDKRCACR 1974
Query: 163 EDGTYIPG 170
D I G
Sbjct: 1975 NDHEMING 1982
Score = 40 (19.1 bits), Expect = 6.6e-49, Sum P(3) = 6.6e-49
Identities = 26/85 (30%), Positives = 34/85 (40%)
Query: 42 GDNCRDVIQCTSSGLQAIRCPAGLYFDIEKQTCDWKGA-VKNCKLKNKERKVKPLLYTDE 100
GD C D + S G AI C G+ + + GA VKN K + V P L +
Sbjct: 942 GDKC-DKLSLCSKG--AI-CEKGVC-SCPETFFESDGACVKNVA---KIKVVVPPLSS-- 991
Query: 101 PLCQDGFLACGDGACIERGLFCNGE 125
C G G+ C+ FC E
Sbjct: 992 --CLGGEECSGNSECVHGICFCKEE 1014
Score = 39 (18.8 bits), Expect = 6.9e-51, Sum P(3) = 6.9e-51
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 137 CDSENDPNRAPPCDPAVCVLPDCFC 161
CD PN P + A CV C C
Sbjct: 1738 CDLR--PNAIPCRNDAQCVNNYCIC 1760
>UNIPROTKB|F1S1W0 [details] [associations]
symbol:LRP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031526 "brush border membrane" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030139
"endocytic vesicle" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0006898 "receptor-mediated endocytosis"
evidence=IEA] [GO:0006766 "vitamin metabolic process" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
InterPro:IPR000742 InterPro:IPR002172 Pfam:PF00057 PROSITE:PS50068
SMART:SM00181 SMART:SM00192 GO:GO:0005783 GO:GO:0006898
GO:GO:0005794 GO:GO:0016324 GO:GO:0008283 GO:GO:0005768
GO:GO:0030900 GO:GO:0005905 GO:GO:0030139 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0031526
GO:GO:0006766 GeneTree:ENSGT00700000104463 EMBL:CU915387
Ensembl:ENSSSCT00000017345 OMA:KENCLAP Uniprot:F1S1W0
Length = 214
Score = 130 (50.8 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 42/122 (34%), Positives = 55/122 (45%)
Query: 103 CQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRA--PP----CDPAVCVL 156
C G+ C G CI + C+G DC D SDE TC + PN A P C VCV
Sbjct: 3 CHPGYFQCSSGHCIPDQMRCDGFADCLDASDEATCPTRF-PNGAYCPATLFECKNHVCVQ 61
Query: 157 PDCFCSEDGTYIPGDLPSKEVPQMITITFDDAIN---NNNIALYK-EMFNGKRKNPNGCD 212
P C DG GD +E+ + IT D +NN +Y+ E+ N + +G D
Sbjct: 62 PSWKC--DGDNDCGDGSDEELHLCLNITCDLTNRFRCDNNRCIYRHELCNHEDDCGDGSD 119
Query: 213 IK 214
K
Sbjct: 120 EK 121
>UNIPROTKB|F1M1B5 [details] [associations]
symbol:F1M1B5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005041 "low-density lipoprotein receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR002172 Pfam:PF00057
PROSITE:PS50068 SMART:SM00181 SMART:SM00192 InterPro:IPR000033
GO:GO:0016021 Gene3D:2.120.10.30 InterPro:IPR011042 SMART:SM00135
PROSITE:PS51120 Gene3D:4.10.400.10 SUPFAM:SSF57424 OMA:RCETAIC
Pfam:PF00058 IPI:IPI00778216 Ensembl:ENSRNOT00000059723
Uniprot:F1M1B5
Length = 449
Score = 136 (52.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 29/92 (31%), Positives = 42/92 (45%)
Query: 73 TCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCNGEKDCNDGS 132
TCD + +CK K+ E+ LLY + C+ GF C + C+ G C+G DC DGS
Sbjct: 262 TCD---GIPHCKDKSDEK----LLYCENRSCRSGFKPCYNRRCVPHGKLCDGTNDCGDGS 314
Query: 133 DENTCDSENDPNRAPPCDPAVCVLPDCFCSED 164
DE C C C+ C+++
Sbjct: 315 DELDCKVSTCSTVEFRCTDGTCIPRSARCNQN 346
>UNIPROTKB|F1LZE5 [details] [associations]
symbol:Lrp1b "Protein Lrp1b" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002172 InterPro:IPR018097
Pfam:PF00057 PROSITE:PS01187 PROSITE:PS50068 SMART:SM00179
SMART:SM00181 SMART:SM00192 InterPro:IPR000033 InterPro:IPR000152
GO:GO:0016021 Gene3D:2.120.10.30 InterPro:IPR011042 SMART:SM00135
PROSITE:PS51120 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 PROSITE:PS00010 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF00058 IPI:IPI00870312 Ensembl:ENSRNOT00000042975 RGD:1306160
ArrayExpress:F1LZE5 Uniprot:F1LZE5
Length = 1074
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 45/147 (30%), Positives = 58/147 (39%)
Query: 25 LCKDKDAGEWFRLVAGEGDNCRDVIQ---C-TSSGLQAIRCPAGLYFDIEKQTCDWKGAV 80
LC + D GE D C D C TS +C G K CD
Sbjct: 380 LCSNGDCVSSRFWCDGEFD-CADGSDEKNCETSCSKDQFQCSNGQCLSA-KWKCDGH--- 434
Query: 81 KNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSE 140
++CK E+ +P P+C C G C+ L CNGE DC DGSDE C +E
Sbjct: 435 EDCKYGEDEKNCEPAF----PVCSSSEYMCASGGCLSASLKCNGETDCVDGSDEMDCVTE 490
Query: 141 NDPNRAPPCDPAVCVLPDCFCSEDGTY 167
++ + A C+ C DG Y
Sbjct: 491 CKEDQFQCRNKAYCIPIRWLC--DGIY 515
>UNIPROTKB|F1SMJ6 [details] [associations]
symbol:C9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006955 "immune
response" evidence=IEA] [GO:0005579 "membrane attack complex"
evidence=IEA] InterPro:IPR001862 InterPro:IPR002172 Pfam:PF00057
PRINTS:PR00764 PROSITE:PS50068 SMART:SM00192 GO:GO:0006955
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR020864 SMART:SM00457 Pfam:PF01823
InterPro:IPR000884 Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895
PROSITE:PS50092 PROSITE:PS00279 PROSITE:PS51412 GO:GO:0005579
InterPro:IPR020863 GeneTree:ENSGT00550000074478 OMA:DFVNWAS
EMBL:CU466476 Ensembl:ENSSSCT00000018356 ArrayExpress:F1SMJ6
Uniprot:F1SMJ6
Length = 453
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/47 (55%), Positives = 29/47 (61%)
Query: 103 CQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPC 149
C F CG G CI+R L CNG+ DC D SDE+ CDS DP PPC
Sbjct: 74 CGSDF-QCGTGRCIKRRLLCNGDNDCGDFSDEDDCDS--DPR--PPC 115
>WB|WBGene00018547 [details] [associations]
symbol:clec-78 species:6239 "Caenorhabditis elegans"
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR001304
InterPro:IPR002172 Pfam:PF00057 Pfam:PF00059 PROSITE:PS50041
PROSITE:PS50068 SMART:SM00034 SMART:SM00192 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 HSSP:Q07954 GeneTree:ENSGT00680000100146
EMBL:FO081403 PIR:T34284 RefSeq:NP_500454.1 UniGene:Cel.26868
ProteinModelPortal:Q20531 SMR:Q20531 PaxDb:Q20531
EnsemblMetazoa:F47C12.2 GeneID:185915 KEGG:cel:CELE_F47C12.2
UCSC:F47C12.2 CTD:185915 WormBase:F47C12.2 eggNOG:NOG311968
InParanoid:Q20531 OMA:TIEHFET NextBio:929976 Uniprot:Q20531
Length = 391
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 25/76 (32%), Positives = 35/76 (46%)
Query: 69 IEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCNGEKDC 128
+E++ +W+ + C L + + P C G C G+CI CNG DC
Sbjct: 158 VERKDLEWR--LDTCNLLRR-------FVCERPACVQGSYFCSSGSCISESKKCNGHNDC 208
Query: 129 NDGSDENTCDSENDPN 144
+DGSDE C S PN
Sbjct: 209 DDGSDEQNCPSAFQPN 224
>UNIPROTKB|E9PC35 [details] [associations]
symbol:LRP2 "Low-density lipoprotein receptor-related
protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR002172
Pfam:PF00057 PROSITE:PS50068 SMART:SM00181 SMART:SM00192
InterPro:IPR000033 GO:GO:0016021 Gene3D:2.120.10.30
InterPro:IPR011042 SMART:SM00135 PROSITE:PS51120 InterPro:IPR002919
SUPFAM:SSF57567 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 Pfam:PF00058 EMBL:AC007556
EMBL:AC008178 HGNC:HGNC:6694 ChiTaRS:LRP2 IPI:IPI00924951
ProteinModelPortal:E9PC35 SMR:E9PC35 Ensembl:ENST00000443831
UCSC:uc010zdf.1 ArrayExpress:E9PC35 Bgee:E9PC35 Uniprot:E9PC35
Length = 1225
Score = 132 (51.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 35/126 (27%), Positives = 53/126 (42%)
Query: 47 DVIQCTSSGLQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDG 106
D C + + C G ++ Q CDWK +C+ + E + T+ +C
Sbjct: 138 DENDCQYPTCEQLTCDNGACYNTS-QKCDWK---VDCRDSSDE-----INCTE--ICLHN 186
Query: 107 FLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFCS-EDG 165
+CG+G CI R C+ + DC DGSDE+ C+ C C+ + C ED
Sbjct: 187 EFSCGNGECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWVCDGEDD 246
Query: 166 TYIPGD 171
GD
Sbjct: 247 CKDNGD 252
Score = 49 (22.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 420 EFLDAFLYWVDEIIERHKDVYFVTMTQ--VIQWIQNPRTI 457
+++ LYW D + + T+ V+Q++ NPR++
Sbjct: 655 DWISKNLYWTDSHYKSISVMRLADKTRRTVVQYLNNPRSV 694
>UNIPROTKB|F1NCJ6 [details] [associations]
symbol:F1NCJ6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005044 "scavenger receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001190 InterPro:IPR001881 InterPro:IPR002172
InterPro:IPR018097 Pfam:PF00057 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50068 PROSITE:PS50287 SMART:SM00179 SMART:SM00181
SMART:SM00192 InterPro:IPR000033 GO:GO:0016021 Gene3D:2.120.10.30
InterPro:IPR011042 SMART:SM00135 PROSITE:PS51120 GO:GO:0005509
Gene3D:4.10.400.10 SUPFAM:SSF57424 GO:GO:0005044 Pfam:PF00058
GeneTree:ENSGT00700000104037 EMBL:AADN02009128 EMBL:AADN02009129
EMBL:AADN02009130 EMBL:AADN02009131 EMBL:AADN02009132
IPI:IPI00818483 Ensembl:ENSGALT00000037927 Uniprot:F1NCJ6
Length = 629
Score = 129 (50.5 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 27/62 (43%), Positives = 33/62 (53%)
Query: 103 CQDGFLACGDGACIERGLFCNGEKDCNDGSDE-NTCDSENDPNRAPPCDPAV-CVLP--D 158
C G + C +G CI L CN E DC DG+DE +TCDS + P PC + C L
Sbjct: 108 CPPGMVRCDEGKCILESLMCNDEDDCLDGTDEPSTCDSRSLPGLGGPCSSKLECHLGAGG 167
Query: 159 CF 160
CF
Sbjct: 168 CF 169
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 103 CQDGFLACGDGA-CIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFC 161
C + C DGA C+ + C+GEKDC DGSDE+ C D PC +C+ C
Sbjct: 195 CPRTHMPCRDGAECVAQEYVCDGEKDCADGSDEDECAQLCDAPGXYPCGLGICLNASLVC 254
Query: 162 S 162
S
Sbjct: 255 S 255
>UNIPROTKB|F1P4K2 [details] [associations]
symbol:SORL1 "Sortilin-related receptor" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR002172
InterPro:IPR003961 InterPro:IPR006581 Pfam:PF00041 Pfam:PF00057
PROSITE:PS50068 PROSITE:PS50853 SMART:SM00060 SMART:SM00192
SMART:SM00602 InterPro:IPR000033 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.120.10.30 InterPro:IPR011042
SMART:SM00135 SUPFAM:SSF49265 PROSITE:PS51120 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 Pfam:PF00058
GeneTree:ENSGT00700000104463 EMBL:AADN02041875 EMBL:AADN02041876
IPI:IPI00584751 Ensembl:ENSGALT00000010649 ArrayExpress:F1P4K2
Uniprot:F1P4K2
Length = 1591
Score = 132 (51.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 33/104 (31%), Positives = 44/104 (42%)
Query: 68 DIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCNGEKD 127
D E DW K C+ + P+ P C CG GACI C+G +D
Sbjct: 1295 DGENDCGDWSDE-KECE----GSPLLPITTAVPPTCLPNHFRCGSGACITNSWVCDGYRD 1349
Query: 128 CNDGSDENTCDSENDPN--RAPPCDPAVCVLPDCFCSEDGTYIP 169
C DGSDE+ C + + PN +PP C + C + IP
Sbjct: 1350 CADGSDEDACPTSH-PNVTSSPPAPRGRCSRTEFECQQLHKCIP 1392
>UNIPROTKB|Q98930 [details] [associations]
symbol:SORL1 "Sortilin-related receptor" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006869 "lipid transport" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IEA] [GO:0034362 "low-density lipoprotein
particle" evidence=IEA] InterPro:IPR002172 InterPro:IPR003961
InterPro:IPR006581 Pfam:PF00041 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50853 SMART:SM00060 SMART:SM00192
SMART:SM00602 InterPro:IPR000033 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0006869 Gene3D:2.120.10.30
InterPro:IPR011042 SMART:SM00135 SUPFAM:SSF49265 PROSITE:PS51120
GO:GO:0008203 GO:GO:0006897 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0034362
Pfam:PF00058 eggNOG:NOG281049 EMBL:Y08109 IPI:IPI00597560
UniGene:Gga.53463 ProteinModelPortal:Q98930 SMR:Q98930
STRING:Q98930 HOGENOM:HOG000007009 HOVERGEN:HBG017830
Uniprot:Q98930
Length = 1592
Score = 132 (51.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 33/104 (31%), Positives = 44/104 (42%)
Query: 68 DIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCNGEKD 127
D E DW K C+ + P+ P C CG GACI C+G +D
Sbjct: 1296 DGENDCGDWSDE-KECE----GSPLLPITTAVPPTCLPNHFRCGSGACITNSWVCDGYRD 1350
Query: 128 CNDGSDENTCDSENDPN--RAPPCDPAVCVLPDCFCSEDGTYIP 169
C DGSDE+ C + + PN +PP C + C + IP
Sbjct: 1351 CADGSDEDACPTSH-PNVTSSPPAPRGRCSRTEFECQQLHKCIP 1393
>UNIPROTKB|Q9DFH4 [details] [associations]
symbol:LRP6 "LDL receptor-related protein 6" species:8355
"Xenopus laevis" [GO:0017147 "Wnt-protein binding" evidence=IPI]
InterPro:IPR002172 Pfam:PF00057 PROSITE:PS50068 SMART:SM00192
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 HSSP:P01130 EMBL:AF276084 UniGene:Xl.21550
ProteinModelPortal:Q9DFH4 Uniprot:Q9DFH4
Length = 214
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 34/104 (32%), Positives = 45/104 (43%)
Query: 97 YTDE---PLCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAV 153
++DE P+C D C G CI+ L CNGE +C D SDE C+ P++ C
Sbjct: 8 HSDEQNCPMCSDMQYQCTSGQCIDSSLRCNGEDNCQDKSDEKNCNEVCAPDQFH-CGNGQ 66
Query: 154 CV--------LPDCFCSEDGTYIPGDLPSKEVPQMITITFDDAI 189
C+ PDC S D P++E P T T I
Sbjct: 67 CIGKHRRCDLSPDCSDSSDEQAC---YPTEEPPPPSTNTIGSII 107
>UNIPROTKB|F1MLA7 [details] [associations]
symbol:F1MLA7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030414
"peptidase inhibitor activity" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005179 "hormone activity" evidence=IEA]
InterPro:IPR000421 InterPro:IPR001007 InterPro:IPR001545
InterPro:IPR002172 InterPro:IPR008037 Pfam:PF00057 Pfam:PF00093
Pfam:PF00754 PROSITE:PS01208 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50068 PROSITE:PS50184 SMART:SM00068
SMART:SM00192 SMART:SM00214 SMART:SM00231 GO:GO:0005576
GO:GO:0030414 GO:GO:0007155 InterPro:IPR002919 Pfam:PF01826
SUPFAM:SSF57567 InterPro:IPR008979 SUPFAM:SSF49785
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR001846 Pfam:PF00094 SMART:SM00216
PROSITE:PS51233 InterPro:IPR000884 Pfam:PF00090 SMART:SM00209
SUPFAM:SSF82895 PROSITE:PS50092 InterPro:IPR014853 Pfam:PF08742
SMART:SM00832 InterPro:IPR006207 PROSITE:PS01225 SMART:SM00041
GO:GO:0010466 OMA:CVPPELC InterPro:IPR006552 SMART:SM00215
GeneTree:ENSGT00700000104340 IPI:IPI00712771 SUPFAM:SSF57283
EMBL:DAAA02011963 EMBL:DAAA02011959 EMBL:DAAA02011960
EMBL:DAAA02011961 EMBL:DAAA02011962 Ensembl:ENSBTAT00000043975
Uniprot:F1MLA7
Length = 5141
Score = 136 (52.9 bits), Expect = 0.00012, P = 0.00012
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 109 ACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFCSEDG 165
ACG G C RG C+GE+DC DGSDE+ CD P+ AP + CV + C DG
Sbjct: 1567 ACGSGECAPRGWRCDGEEDCADGSDESGCDRPCAPHHAPCARGSHCVAAEQLC--DG 1621
>UNIPROTKB|E1BUD4 [details] [associations]
symbol:SORL1 "Sortilin-related receptor" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0030169 "low-density
lipoprotein particle binding" evidence=IEA] InterPro:IPR002172
InterPro:IPR003961 InterPro:IPR006581 Pfam:PF00041 Pfam:PF00057
PROSITE:PS50068 PROSITE:PS50853 SMART:SM00060 SMART:SM00192
SMART:SM00602 InterPro:IPR000033 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.120.10.30 InterPro:IPR011042
SMART:SM00135 SUPFAM:SSF49265 PROSITE:PS51120 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0030169
Pfam:PF00058 GeneTree:ENSGT00700000104463 IPI:IPI00597560
OMA:TNVYISS EMBL:AADN02041875 EMBL:AADN02041876
ProteinModelPortal:E1BUD4 Ensembl:ENSGALT00000010639
ArrayExpress:E1BUD4 Uniprot:E1BUD4
Length = 2116
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 33/104 (31%), Positives = 44/104 (42%)
Query: 68 DIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCNGEKD 127
D E DW K C+ + P+ P C CG GACI C+G +D
Sbjct: 1289 DGENDCGDWSDE-KECE----GSPLLPITTAVPPTCLPNHFRCGSGACITNSWVCDGYRD 1343
Query: 128 CNDGSDENTCDSENDPN--RAPPCDPAVCVLPDCFCSEDGTYIP 169
C DGSDE+ C + + PN +PP C + C + IP
Sbjct: 1344 CADGSDEDACPTSH-PNVTSSPPAPRGRCSRTEFECQQLHKCIP 1386
>UNIPROTKB|F1NCJ5 [details] [associations]
symbol:F1NCJ5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002172 InterPro:IPR018097
Pfam:PF00057 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50068
SMART:SM00179 SMART:SM00181 SMART:SM00192 InterPro:IPR000033
GO:GO:0016021 Gene3D:2.120.10.30 InterPro:IPR011042 SMART:SM00135
PROSITE:PS51120 GO:GO:0005509 Gene3D:4.10.400.10 SUPFAM:SSF57424
Pfam:PF00058 GeneTree:ENSGT00700000104037 EMBL:AADN02009128
EMBL:AADN02009129 EMBL:AADN02009130 EMBL:AADN02009131
EMBL:AADN02009132 IPI:IPI00819088 ProteinModelPortal:F1NCJ5
Ensembl:ENSGALT00000037928 OMA:FWTEIGN Uniprot:F1NCJ5
Length = 647
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 26/66 (39%), Positives = 33/66 (50%)
Query: 98 TDEPLCQDGFLACGDGA-CIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVL 156
T E C + C DGA C+ + C+GEKDC DGSDE+ C D PC +C+
Sbjct: 200 TAELSCPRTHMPCRDGAECVAQEYVCDGEKDCADGSDEDECAQLCDAPGXYPCGLGICLN 259
Query: 157 PDCFCS 162
CS
Sbjct: 260 ASLVCS 265
>UNIPROTKB|P98157 [details] [associations]
symbol:LRP1 "Low-density lipoprotein receptor-related
protein 1" species:9031 "Gallus gallus" [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005905
"coated pit" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002172 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00057
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50068
SMART:SM00179 SMART:SM00181 SMART:SM00192 InterPro:IPR000033
InterPro:IPR000152 GO:GO:0016021 Gene3D:2.120.10.30
InterPro:IPR011042 SMART:SM00135 PROSITE:PS51120 GO:GO:0006897
GO:GO:0005905 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 PROSITE:PS00010 InterPro:IPR009030
SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662 Pfam:PF00058
eggNOG:NOG235850 HOVERGEN:HBG006292 EMBL:X74904 IPI:IPI00582419
IPI:IPI00593211 PIR:A53102 RefSeq:NP_990573.1 UniGene:Gga.689
PDB:1LPX PDBsum:1LPX ProteinModelPortal:P98157 SMR:P98157
STRING:P98157 PRIDE:P98157 GeneID:396170 KEGG:gga:396170 CTD:4035
KO:K04550 NextBio:20816224 Uniprot:P98157
Length = 4543
Score = 134 (52.2 bits), Expect = 0.00017, P = 0.00017
Identities = 37/126 (29%), Positives = 54/126 (42%)
Query: 38 VAGEGDNCRDVIQCTSSGLQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLY 97
V E C+ + T + C G D + TCD G V +CK K+ E++ Y
Sbjct: 2504 VLQEDFTCK-ALNSTCNVHDEFECGNGDCIDFSR-TCD--GVV-HCKDKSDEKQS----Y 2554
Query: 98 TDEPLCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLP 157
C+ GFL C +G C+ +CNG DC D SDE C+ + C C+
Sbjct: 2555 CSSRKCKKGFLHCMNGRCVASRFWCNGVDDCGDNSDEVPCNKTSCAATEFRCRDGSCIGN 2614
Query: 158 DCFCSE 163
C++
Sbjct: 2615 SSRCNQ 2620
Score = 128 (50.1 bits), Expect = 0.00076, P = 0.00076
Identities = 31/98 (31%), Positives = 40/98 (40%)
Query: 42 GDNCRDVIQCT--SSGLQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLYTD 99
GD + +C + G RC G + CD G +C + E P +
Sbjct: 2842 GDGSDESPECEYPTCGPHEFRCANGRCLSNSQWECD--GEF-DCHDHSDEAPKNPRCSSP 2898
Query: 100 EPLCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTC 137
E C D F C +G CI L C+ DC DGSDE C
Sbjct: 2899 ESKCNDSFFMCKNGKCIPEALLCDNNNDCADGSDELNC 2936
>WB|WBGene00019811 [details] [associations]
symbol:egg-2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007338 "single fertilization" evidence=IMP] InterPro:IPR002172
Pfam:PF00057 PROSITE:PS50068 SMART:SM00192 GO:GO:0005886
GO:GO:0007338 GO:GO:0019915 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 HSSP:P01130
GeneTree:ENSGT00700000104037 EMBL:FO081121 eggNOG:NOG284759
HOGENOM:HOG000018671 PIR:T16642 RefSeq:NP_498537.1
ProteinModelPortal:Q21629 SMR:Q21629 STRING:Q21629 PaxDb:Q21629
EnsemblMetazoa:R01H2.3 GeneID:187510 KEGG:cel:CELE_R01H2.3
UCSC:R01H2.3 CTD:187510 WormBase:R01H2.3 InParanoid:Q21629
OMA:DASRRCD NextBio:935522 Uniprot:Q21629
Length = 548
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 34/125 (27%), Positives = 50/125 (40%)
Query: 103 CQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSEN-DPNRAPPCDPAVCVLP---- 157
CQ G CG CI+ C+G DC+DGSDE+ CD + + C+ C++
Sbjct: 254 CQKGAHKCGKN-CIKASKVCDGIPDCDDGSDEHQCDCKTCSGSEKALCEDGTCIMRSQVC 312
Query: 158 ----DCFCSEDGTYIPGDLPSKEVPQMITI-TFDDAINNNNIALYKEMFNGKRKNPNGCD 212
DC D PG ++ + + T DD + + + N CD
Sbjct: 313 DGKHDCLDGIDEENCPGSCSNERFSSKLKLLTCDDGNQYSEVEACSGLVEACELNCPKCD 372
Query: 213 IKATF 217
K TF
Sbjct: 373 PKHTF 377
>ZFIN|ZDB-GENE-040426-803 [details] [associations]
symbol:vldlr "very low density lipoprotein
receptor" species:7955 "Danio rerio" [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002172 InterPro:IPR018097
Pfam:PF00057 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50068
SMART:SM00179 SMART:SM00181 SMART:SM00192 InterPro:IPR000033
InterPro:IPR000152 ZFIN:ZDB-GENE-040426-803 GO:GO:0016021
Gene3D:2.120.10.30 InterPro:IPR011042 SMART:SM00135 PROSITE:PS51120
GO:GO:0005509 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 PROSITE:PS00010 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF00058 GeneTree:ENSGT00700000104037 CTD:7436 OMA:SIDIGRH
EMBL:CR628386 IPI:IPI00832371 RefSeq:NP_957217.2 UniGene:Dr.82354
PRIDE:E7FF13 Ensembl:ENSDART00000023766 GeneID:393897
KEGG:dre:393897 NextBio:20814876 ArrayExpress:E7FF13 Bgee:E7FF13
Uniprot:E7FF13
Length = 866
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 32/91 (35%), Positives = 39/91 (42%)
Query: 76 WK-GAVKNCKLKNKERKVKPLLYTDEPLCQDGFLACGDGACIERGLFCNGEKDCNDGSDE 134
WK K+C N E ++ T PL C G C+ R CNGE DC DGSDE
Sbjct: 128 WKCDGEKDCD--NGEDEINCGNITCAPL----EFTCSSGRCVSRKFVCNGEDDCGDGSDE 181
Query: 135 NTC-DSENDPNRAPPCDPAVCVLPDCFCSED 164
C S P+ P C C+ C +D
Sbjct: 182 QDCAPSSCSPSEIP-CGNNTCIPRSWLCDDD 211
Score = 122 (48.0 bits), Expect = 0.00054, P = 0.00054
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 103 CQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSEN-DPNRAPPCDPAVCV 155
C + CG G CI R C+G+ DC DGSDE C + N P++ CD C+
Sbjct: 235 CSPSEMQCGSGECIHRKWRCDGDPDCKDGSDEKNCSARNCRPDQFK-CDDGSCI 287
>UNIPROTKB|F1MKZ6 [details] [associations]
symbol:LRP1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005041 "low-density lipoprotein receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002172 InterPro:IPR018097
Pfam:PF00057 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50068 SMART:SM00179 SMART:SM00181 SMART:SM00192
InterPro:IPR000033 InterPro:IPR000152 GO:GO:0016021
Gene3D:2.120.10.30 InterPro:IPR011042 SMART:SM00135 PROSITE:PS51120
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 PROSITE:PS00010 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR026823 Pfam:PF12662 GO:GO:0005041 Pfam:PF00058
GeneTree:ENSGT00700000104037 OMA:ECPRGED EMBL:DAAA02004863
EMBL:DAAA02004864 EMBL:DAAA02004865 EMBL:DAAA02004866
EMBL:DAAA02004867 EMBL:DAAA02004868 IPI:IPI00688043
Ensembl:ENSBTAT00000034302 Uniprot:F1MKZ6
Length = 1726
Score = 129 (50.5 bits), Expect = 0.00021, P = 0.00021
Identities = 41/132 (31%), Positives = 54/132 (40%)
Query: 41 EGD-NCRDVIQ---C-TSSGLQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPL 95
+GD +C D C TS +C G K CD ++CK E+ +P
Sbjct: 656 DGDFDCADGSDERNCETSCSKDQFQCSNGQCISA-KWKCDGH---EDCKYGEDEKNCEPA 711
Query: 96 LYTDEPLCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCV 155
P C C G CI L CNGE DC DGSDE C +E ++ + A C+
Sbjct: 712 ----SPTCSSSEYICASGGCISASLKCNGEYDCADGSDEMDCVTECKEDQFRCRNKAHCI 767
Query: 156 LPDCFCSEDGTY 167
C DG +
Sbjct: 768 PIRWLC--DGIH 777
>UNIPROTKB|P98164 [details] [associations]
symbol:LRP2 "Low-density lipoprotein receptor-related
protein 2" species:9606 "Homo sapiens" [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006898 "receptor-mediated endocytosis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0031526 "brush border
membrane" evidence=IEA] [GO:0005905 "coated pit" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016324 "apical
plasma membrane" evidence=ISS] [GO:0005764 "lysosome" evidence=TAS]
[GO:0006486 "protein glycosylation" evidence=TAS] [GO:0006629
"lipid metabolic process" evidence=TAS] [GO:0006897 "endocytosis"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0008202 "steroid metabolic process" evidence=TAS] [GO:0042359
"vitamin D metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002172
InterPro:IPR018097 Pfam:PF00057 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50068 SMART:SM00179 SMART:SM00181
SMART:SM00192 InterPro:IPR000033 InterPro:IPR000152 GO:GO:0005783
GO:GO:0016021 GO:GO:0006898 GO:GO:0005794 GO:GO:0005615
Reactome:REACT_15493 GO:GO:0042493 GO:GO:0016324 GO:GO:0008283
GO:GO:0007568 GO:GO:0031100 GO:GO:0005768 Gene3D:2.120.10.30
InterPro:IPR011042 SMART:SM00135 PROSITE:PS51120 GO:GO:0006486
GO:GO:0030900 GO:GO:0005905 GO:GO:0005509 InterPro:IPR002919
SUPFAM:SSF57567 GO:GO:0005764 GO:GO:0016197 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0032526 GO:GO:0030139 PROSITE:PS01186
GO:GO:0046879 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 PROSITE:PS00010
Pathway_Interaction_DB:hedgehog_2pathway GO:GO:0010165
GO:GO:0031526 GO:GO:0033280 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR026823 Pfam:PF12662 GO:GO:0042359 DrugBank:DB00047
DrugBank:DB00046 DrugBank:DB00030 DrugBank:DB00071 GO:GO:0045056
InterPro:IPR019825 GO:GO:0020028 Pfam:PF00058 DrugBank:DB00013
GO:GO:0042954 eggNOG:NOG235850 HOGENOM:HOG000230574 EMBL:U33837
EMBL:AC007556 EMBL:AC008178 EMBL:U04441 EMBL:S73145 IPI:IPI00024292
PIR:I38467 PIR:I53413 RefSeq:NP_004516.2 UniGene:Hs.657729 PDB:2M0P
PDBsum:2M0P ProteinModelPortal:P98164 SMR:P98164 IntAct:P98164
MINT:MINT-2860496 STRING:P98164 PhosphoSite:P98164 DMDM:160332309
PaxDb:P98164 PRIDE:P98164 Ensembl:ENST00000263816 GeneID:4036
KEGG:hsa:4036 UCSC:uc002ues.3 CTD:4036 GeneCards:GC02M169947
H-InvDB:HIX0029894 HGNC:HGNC:6694 HPA:HPA005980 MIM:222448
MIM:600073 neXtProt:NX_P98164 Orphanet:2143 PharmGKB:PA30452
HOVERGEN:HBG097941 InParanoid:P98164 KO:K06233 OMA:TRPPGMC
OrthoDB:EOG4WQ11K PhylomeDB:P98164 ChEMBL:CHEMBL1255140
ChiTaRS:LRP2 DrugBank:DB00798 GenomeRNAi:4036 NextBio:15810
ArrayExpress:P98164 Bgee:P98164 CleanEx:HS_LRP2
Genevestigator:P98164 GermOnline:ENSG00000081479 Uniprot:P98164
Length = 4655
Score = 132 (51.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 35/126 (27%), Positives = 53/126 (42%)
Query: 47 DVIQCTSSGLQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEPLCQDG 106
D C + + C G ++ Q CDWK +C+ + E + T+ +C
Sbjct: 138 DENDCQYPTCEQLTCDNGACYNTS-QKCDWK---VDCRDSSDE-----INCTE--ICLHN 186
Query: 107 FLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFCS-EDG 165
+CG+G CI R C+ + DC DGSDE+ C+ C C+ + C ED
Sbjct: 187 EFSCGNGECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWVCDGEDD 246
Query: 166 TYIPGD 171
GD
Sbjct: 247 CKDNGD 252
Score = 54 (24.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 433 IERHKDVYFVTMTQVIQWIQNPRTITEVK 461
I+ DV F Q I W++NP I VK
Sbjct: 1777 IQNGLDVEFDDAEQYIYWVENPGEIHRVK 1805
Score = 49 (22.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 420 EFLDAFLYWVDEIIERHKDVYFVTMTQ--VIQWIQNPRTI 457
+++ LYW D + + T+ V+Q++ NPR++
Sbjct: 792 DWISKNLYWTDSHYKSISVMRLADKTRRTVVQYLNNPRSV 831
>UNIPROTKB|Q07954 [details] [associations]
symbol:LRP1 "Prolow-density lipoprotein receptor-related
protein 1" species:9606 "Homo sapiens" [GO:0006898
"receptor-mediated endocytosis" evidence=IEA] [GO:0008203
"cholesterol metabolic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005905
"coated pit" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=ISS] [GO:0042953 "lipoprotein transport" evidence=NAS]
[GO:0042954 "lipoprotein transporter activity" evidence=NAS]
[GO:0034185 "apolipoprotein binding" evidence=IDA;IPI] [GO:0004872
"receptor activity" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0070325 "lipoprotein particle receptor binding"
evidence=IC] [GO:0032429 "regulation of phospholipase A2 activity"
evidence=ISS] [GO:0032374 "regulation of cholesterol transport"
evidence=ISS] [GO:0032370 "positive regulation of lipid transport"
evidence=ISS] [GO:0010875 "positive regulation of cholesterol
efflux" evidence=ISS] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=ISS] [GO:0043277 "apoptotic
cell clearance" evidence=ISS] [GO:0014912 "negative regulation of
smooth muscle cell migration" evidence=ISS] [GO:0032956 "regulation
of actin cytoskeleton organization" evidence=ISS] [GO:0035909
"aorta morphogenesis" evidence=ISS] [GO:2000587 "negative
regulation of platelet-derived growth factor receptor-beta
signaling pathway" evidence=ISS] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0097242 "beta-amyloid clearance"
evidence=TAS] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002172 InterPro:IPR018097 Pfam:PF00057 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50068 SMART:SM00179
SMART:SM00181 SMART:SM00192 InterPro:IPR000033 InterPro:IPR000152
GO:GO:0005634 GO:GO:0006898 GO:GO:0048471 GO:GO:0005887
GO:GO:0032403 GO:GO:0008283 GO:GO:0007205 GO:GO:0007568
GO:GO:0043025 GO:GO:0005768 GO:GO:0030425 Gene3D:2.120.10.30
InterPro:IPR011042 SMART:SM00135 PROSITE:PS51120 DrugBank:DB00102
GO:GO:0008203 GO:GO:0005905 GO:GO:0005509 GO:GO:0004872
GO:GO:0030136 GO:GO:0042157 GO:GO:0010875 InterPro:IPR013032
PROSITE:PS00022 Pathway_Interaction_DB:pdgfrbpathway
PROSITE:PS01186 GO:GO:0014912 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 PROSITE:PS00010 GO:GO:0032956
Pathway_Interaction_DB:amb2_neutrophils_pathway PDB:2FYL
PDBsum:2FYL DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
GO:GO:0035909 GO:GO:0030178 PDB:2KNY PDBsum:2KNY DrugBank:DB00025
InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662
GO:GO:0043277 GO:GO:0034185 GO:GO:0051222 Pfam:PF00058
DrugBank:DB00100 EMBL:AC137834 GO:GO:0042954 eggNOG:NOG235850
HOGENOM:HOG000230574 HOVERGEN:HBG006292 OrthoDB:EOG42BX7K CTD:4035
KO:K04550 EMBL:X13916 EMBL:AF058427 EMBL:DQ314873 EMBL:AC023237
EMBL:AC137628 EMBL:X15424 EMBL:Y18524 IPI:IPI00020557 PIR:S02392
RefSeq:NP_002323.2 UniGene:Hs.162757 PDB:1CR8 PDB:1D2L PDB:1J8E
PDB:2FYJ PDB:2KNX PDBsum:1CR8 PDBsum:1D2L PDBsum:1J8E PDBsum:2FYJ
PDBsum:2KNX ProteinModelPortal:Q07954 SMR:Q07954 IntAct:Q07954
MINT:MINT-5004471 STRING:Q07954 PhosphoSite:Q07954 DMDM:1708865
PaxDb:Q07954 PRIDE:Q07954 Ensembl:ENST00000243077 GeneID:4035
KEGG:hsa:4035 UCSC:uc001snd.3 GeneCards:GC12P057497 HGNC:HGNC:6692
HPA:CAB018621 HPA:HPA022903 MIM:107770 neXtProt:NX_Q07954
PharmGKB:PA233 InParanoid:Q07954 OMA:ESVTAGC PhylomeDB:Q07954
ChiTaRS:LRP1 EvolutionaryTrace:Q07954 GenomeRNAi:4035 NextBio:15806
ArrayExpress:Q07954 Bgee:Q07954 CleanEx:HS_LRP1
Genevestigator:Q07954 GermOnline:ENSG00000123384 GO:GO:0070325
GO:GO:0097242 GO:GO:2000587 GO:GO:0032429 Uniprot:Q07954
Length = 4544
Score = 132 (51.5 bits), Expect = 0.00028, P = 0.00028
Identities = 44/145 (30%), Positives = 65/145 (44%)
Query: 41 EGDN-CRDVIQCTSSGL--QAIRCPAGLYFDIEKQTCD-------WK-GAVKNCKLKNKE 89
+GDN C D T + QA R P G + D + D W+ +C + E
Sbjct: 1035 DGDNDCGDYSDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE 1094
Query: 90 RKVKPLLYTDEPLCQDGFLACGDGA-CIERGLFCNGEKDCNDGSDENTCDSENDPNRAPP 148
+ + + + +P + G C D A CI + C+G+ DC D SDE C+S + P
Sbjct: 1095 KSCEGVTHVCDPSVKFG---CKDSARCISKAWVCDGDNDCEDNSDEENCESLACRPPSHP 1151
Query: 149 C--DPAVCVLPDCFCSEDGTYIPGD 171
C + +VC+ PD C DG GD
Sbjct: 1152 CANNTSVCLPPDKLC--DGNDDCGD 1174
>ZFIN|ZDB-GENE-070912-401 [details] [associations]
symbol:lrp1bb "low density lipoprotein
receptor-related protein 1Bb" species:7955 "Danio rerio"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002172 InterPro:IPR018097 Pfam:PF00057 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50068 SMART:SM00179
SMART:SM00181 SMART:SM00192 InterPro:IPR000033 InterPro:IPR000152
ZFIN:ZDB-GENE-070912-401 GO:GO:0016021 Gene3D:2.120.10.30
InterPro:IPR011042 SMART:SM00135 PROSITE:PS51120 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 PROSITE:PS00010 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR026823 Pfam:PF12662 Pfam:PF00058
GeneTree:ENSGT00700000104037 EMBL:BX663508 EMBL:CR932978
EMBL:CR936905 IPI:IPI00898692 Ensembl:ENSDART00000139033
Uniprot:F1R6C6
Length = 4456
Score = 125 (49.1 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 35/114 (30%), Positives = 52/114 (45%)
Query: 103 CQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFCS 162
C +G AC G CI C+G+KDC DG+DE CDS N+ C C+ C
Sbjct: 2569 CAEGHFACPSGNCISSVWLCDGQKDCEDGADEFQCDSSCLWNQFA-CSKNKCIAKQWLC- 2626
Query: 163 EDGTYIPGDLPSKEVPQMITITFDDAINN--NNIALYKEMF--NGKRKNPNGCD 212
DG GD + V ++T + + + A + + +G+R P+G D
Sbjct: 2627 -DGEDDCGDGVDESVDLCGSVTCAPGLFSCPGSYACVPKRWLCDGERDCPDGSD 2679
Score = 63 (27.2 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 29/97 (29%), Positives = 44/97 (45%)
Query: 26 CKDK-DAGEWF-RLVAGEGDNCRDVIQCT---SSGLQAIRCPAGLYFDIEKQTCDWKGAV 80
C D+ D G + R + G G C QC+ S G+ CPAGL+ + +TC+ AV
Sbjct: 1050 CADRSDEGPFCERCLQGNG-GCSH--QCSVIPSKGV-VCSCPAGLHLGSDNRTCE---AV 1102
Query: 81 KNCKLKNKERKV-KPLLYTDEPLCQDGFLACGDG-AC 115
C K ++ + T + C G+ DG +C
Sbjct: 1103 DYCSAHLKCSQICEQHKTTVKCSCYPGWRLDADGESC 1139
Score = 45 (20.9 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 21/105 (20%), Positives = 41/105 (39%)
Query: 364 NFDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAWLKNNPEFLD 423
N + Y P +D + + + L N D ++R P + H + F D
Sbjct: 3057 NKEIYSPSALTIDYTNKRIYWADDNHILFANMDGS-QRHRVP---HDHIQGVMGLTLFED 3112
Query: 424 AFLYWVDEIIERHKDVYFVTMTQVIQWIQNPRTITEVKNFDPWRE 468
F+YW D + + + T ++ + + + I V + P R+
Sbjct: 3113 -FIYWTDGKSKSLRRAHKTTGANAVELLNSWQAIKSVIVYHPLRQ 3156
>ZFIN|ZDB-GENE-030131-7126 [details] [associations]
symbol:lrp1b "low density lipoprotein
receptor-related protein 1b" species:7955 "Danio rerio" [GO:0005509
"calcium ion binding" evidence=IEA] [GO:1901342 "regulation of
vasculature development" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002172
InterPro:IPR018097 Pfam:PF00057 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50068 SMART:SM00179 SMART:SM00181
SMART:SM00192 InterPro:IPR000033 InterPro:IPR000152
ZFIN:ZDB-GENE-030131-7126 GO:GO:0016021 Gene3D:2.120.10.30
InterPro:IPR011042 SMART:SM00135 PROSITE:PS51120 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 PROSITE:PS00010 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR026823 Pfam:PF12662 Pfam:PF00058
GeneTree:ENSGT00700000104037 EMBL:BX005414 EMBL:BX957329
EMBL:CT573346 IPI:IPI00859328 Ensembl:ENSDART00000088208
Bgee:F1QY34 Uniprot:F1QY34
Length = 4549
Score = 131 (51.2 bits), Expect = 0.00036, P = 0.00036
Identities = 33/122 (27%), Positives = 52/122 (42%)
Query: 42 GDNCRDVIQCTSSGLQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLLYTDEP 101
GDN T + + C G D TCD ++ +CK K+ E++ Y
Sbjct: 2514 GDNTCVAENTTCNSVDEFECGNGDCIDYSL-TCD---SLAHCKDKSDEKQA----YCANR 2565
Query: 102 LCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFC 161
+C+ G+ C +G CI+ +C+ DC DGSDE C+ C C+ C
Sbjct: 2566 MCKKGYRRCINGRCIKHSSWCDSTDDCGDGSDELPCNMTLCSAAEFQCKDGSCITNSSRC 2625
Query: 162 SE 163
++
Sbjct: 2626 NQ 2627
>ZFIN|ZDB-GENE-030131-6015 [details] [associations]
symbol:si:dkey-88l16.3 "si:dkey-88l16.3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002172 InterPro:IPR018097
Pfam:PF00057 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50068 SMART:SM00179 SMART:SM00181 SMART:SM00192
InterPro:IPR000033 InterPro:IPR000152 ZFIN:ZDB-GENE-030131-6015
GO:GO:0016021 Gene3D:2.120.10.30 InterPro:IPR011042 SMART:SM00135
PROSITE:PS51120 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 PROSITE:PS00010
GeneTree:ENSGT00700000104037 EMBL:CR536613 IPI:IPI00836930
Ensembl:ENSDART00000140869 Bgee:F1QN45 Uniprot:F1QN45
Length = 1765
Score = 126 (49.4 bits), Expect = 0.00046, P = 0.00046
Identities = 41/122 (33%), Positives = 54/122 (44%)
Query: 25 LCKDKDAGEWFRLVAGEGDNCRD---VIQCTSSGLQAIRCPAGLYFDIEKQTCDWKGAVK 81
LCKDK +V +C D QC + LQ C ++Q CD K
Sbjct: 505 LCKDKRKCVHKAVVCDGYSHCADGSDEYQCPTCALQ---CDQKTVCLTKQQRCDGK---P 558
Query: 82 NCKLKNKERKVKP---LLYTDEPL-CQDGFLACGDGA-CIERGLFCNGEKDCNDGSDENT 136
+C+ + E+ + T PL C G C DG C+ C+GEKDC DGSDE T
Sbjct: 559 DCRDGSDEKDCYTGGVIASTSLPLRCPLGSKPCMDGKECVLLDHLCDGEKDCKDGSDERT 618
Query: 137 CD 138
C+
Sbjct: 619 CE 620
>UNIPROTKB|E1BGJ0 [details] [associations]
symbol:LRP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000587 "negative regulation of platelet-derived growth
factor receptor-beta signaling pathway" evidence=IEA] [GO:0097242
"beta-amyloid clearance" evidence=IEA] [GO:0043277 "apoptotic cell
clearance" evidence=IEA] [GO:0035909 "aorta morphogenesis"
evidence=IEA] [GO:0034185 "apolipoprotein binding" evidence=IEA]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IEA] [GO:0032429 "regulation of phospholipase A2 activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IEA] [GO:0014912 "negative regulation of smooth muscle
cell migration" evidence=IEA] [GO:0010875 "positive regulation of
cholesterol efflux" evidence=IEA] [GO:0008203 "cholesterol
metabolic process" evidence=IEA] [GO:0006898 "receptor-mediated
endocytosis" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002172 InterPro:IPR018097 Pfam:PF00057 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50068 SMART:SM00179
SMART:SM00181 SMART:SM00192 InterPro:IPR000033 InterPro:IPR000152
GO:GO:0006898 GO:GO:0005887 Gene3D:2.120.10.30 InterPro:IPR011042
SMART:SM00135 PROSITE:PS51120 GO:GO:0008203 GO:GO:0005509
GO:GO:0010875 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
GO:GO:0014912 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 PROSITE:PS00010 GO:GO:0032956 GO:GO:0035909
GO:GO:0030178 InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0043277
Pfam:PF00058 GeneTree:ENSGT00700000104037 OMA:ESVTAGC GO:GO:2000587
GO:GO:0032429 EMBL:DAAA02013512 EMBL:DAAA02013513 IPI:IPI00704118
Ensembl:ENSBTAT00000017556 Uniprot:E1BGJ0
Length = 4544
Score = 130 (50.8 bits), Expect = 0.00046, P = 0.00046
Identities = 44/145 (30%), Positives = 65/145 (44%)
Query: 41 EGDN-CRDVIQCTSSGL--QAIRCPAGLYFDIEKQTCD-------WK-GAVKNCKLKNKE 89
+GDN C D T + QA R P G + D + D W+ +C + E
Sbjct: 1035 DGDNDCGDYSDETHANCTNQATRPPGGCHNDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE 1094
Query: 90 RKVKPLLYTDEPLCQDGFLACGDGA-CIERGLFCNGEKDCNDGSDENTCDSENDPNRAPP 148
+ + + + +P + G C D A CI + C+G+ DC D SDE C+S + P
Sbjct: 1095 KSCEGVTHVCDPNVKFG---CKDSARCISKAWVCDGDSDCEDNSDEENCESLACRPPSHP 1151
Query: 149 C--DPAVCVLPDCFCSEDGTYIPGD 171
C + +VC+ PD C DG GD
Sbjct: 1152 CANNTSVCLPPDKLC--DGNDDCGD 1174
>UNIPROTKB|P98167 [details] [associations]
symbol:SSPO "SCO-spondin" species:9913 "Bos taurus"
[GO:0005615 "extracellular space" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030414 "peptidase inhibitor activity"
evidence=IEA] [GO:0005179 "hormone activity" evidence=IEA]
InterPro:IPR000421 InterPro:IPR001007 InterPro:IPR001545
InterPro:IPR002172 InterPro:IPR008037 Pfam:PF00057 Pfam:PF00093
Pfam:PF00754 PROSITE:PS01208 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50184
PROSITE:PS51041 SMART:SM00068 SMART:SM00192 SMART:SM00214
SMART:SM00231 GO:GO:0005615 GO:GO:0030414 GO:GO:0007155
InterPro:IPR002919 Pfam:PF01826 SUPFAM:SSF57567 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR008979 SUPFAM:SSF49785
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR001846 Pfam:PF00094 SMART:SM00216
PROSITE:PS51233 InterPro:IPR000884 Pfam:PF00090 SMART:SM00209
SUPFAM:SSF82895 PROSITE:PS50092 InterPro:IPR014853 Pfam:PF08742
SMART:SM00832 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0010466 InterPro:IPR006552 SMART:SM00215
EMBL:AJ416457 EMBL:X93922 IPI:IPI00712771 RefSeq:NP_777131.1
UniGene:Bt.4812 ProteinModelPortal:P98167 PRIDE:P98167
GeneID:282659 KEGG:bta:282659 CTD:23145 HOGENOM:HOG000154433
HOVERGEN:HBG080794 NextBio:20806337 SUPFAM:SSF57283 Uniprot:P98167
Length = 5146
Score = 136 (52.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 109 ACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRAPPCDPAVCVLPDCFCSEDG 165
ACG G C RG C+GE+DC DGSDE+ CD P+ AP + CV + C DG
Sbjct: 1568 ACGSGECAPRGWRCDGEEDCADGSDESGCDRPCAPHHAPCARGSHCVAAEQLC--DG 1622
Score = 48 (22.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 21/80 (26%), Positives = 30/80 (37%)
Query: 40 GEGDNCRDVIQCTSSGLQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKP---LL 96
GEG +C S G + CP GL++D C C + R+ +P +
Sbjct: 485 GEGSEWSCGEECVS-GCE---CPPGLFWD--GALCV---PAARCPCYRRRRRYEPGDTVR 535
Query: 97 YTDEPL-CQDGFLACGDGAC 115
P C+DG C C
Sbjct: 536 QLCNPCECRDGRWLCAQAPC 555
>ZFIN|ZDB-GENE-050119-2 [details] [associations]
symbol:lrp2a "low density lipoprotein
receptor-related protein 2a" species:7955 "Danio rerio" [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0070293 "renal absorption"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002172 InterPro:IPR018097
Pfam:PF00057 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50068
SMART:SM00179 SMART:SM00181 SMART:SM00192 InterPro:IPR000033
InterPro:IPR000152 ZFIN:ZDB-GENE-050119-2 GO:GO:0016021
GO:GO:0006898 Gene3D:2.120.10.30 InterPro:IPR011042 SMART:SM00135
PROSITE:PS51120 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 PROSITE:PS00010 GO:GO:0070293
InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662
Pfam:PF00058 KO:K06233 EMBL:HM754616 IPI:IPI00897492
RefSeq:NP_001181916.1 UniGene:Dr.86548 ProteinModelPortal:E0AE56
GeneID:568184 KEGG:dre:568184 CTD:568184 NextBio:20889046
Uniprot:E0AE56
Length = 4673
Score = 129 (50.5 bits), Expect = 0.00061, P = 0.00061
Identities = 58/202 (28%), Positives = 83/202 (41%)
Query: 40 GEGD---NCRDVIQCTSSGLQAIRCPAGLYFDIEKQTCDWKGAVKNCKLKNKERKVKPLL 96
G+G NC CT S RC L+ ++ CD +C+ + ER + L
Sbjct: 3763 GDGSDEHNCSPR-PCTES---EYRCD-NLHCIPDRWVCDHDN---DCEDNSDERDCE--L 3812
Query: 97 YTDEPLCQDGFLACGDGACIERGLFCNGEKDCNDGSDENTCDSENDPNRA--PP----CD 150
T C G+ C G CI C+G DC D +DE++C + PN PP C
Sbjct: 3813 RT----CHPGYFQCASGHCIAERFKCDGNADCLDFTDESSCPTRY-PNSTYCPPFLFECK 3867
Query: 151 PAVCVLPDCFCSEDGTYIPGDLPSKEVPQMITITFDDAIN---NNNIALYK-EMFNGKRK 206
VCV C DG GD +E+ + I+ D +NN +Y E+ N
Sbjct: 3868 NHVCVQQHWIC--DGDNDCGDNSDEELHLCLDISCDPPFRFRCDNNRCIYSHEVCNSIDD 3925
Query: 207 NPNGCDIKATFFVSHKYTNYSA 228
+G D +A V+ + SA
Sbjct: 3926 CGDGTDERAEHCVTPTHGPCSA 3947
>UNIPROTKB|F1NCJ7 [details] [associations]
symbol:F1NCJ7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002172 InterPro:IPR018097
Pfam:PF00057 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50068
SMART:SM00179 SMART:SM00181 SMART:SM00192 InterPro:IPR000033
GO:GO:0016021 Gene3D:2.120.10.30 InterPro:IPR011042 SMART:SM00135
PROSITE:PS51120 GO:GO:0005509 Gene3D:4.10.400.10 SUPFAM:SSF57424
Pfam:PF00058 GeneTree:ENSGT00700000104037 EMBL:AADN02009128
EMBL:AADN02009129 EMBL:AADN02009130 EMBL:AADN02009131
EMBL:AADN02009132 IPI:IPI00823360 Ensembl:ENSGALT00000037926
Uniprot:F1NCJ7
Length = 534
Score = 118 (46.6 bits), Expect = 0.00078, P = 0.00078
Identities = 26/63 (41%), Positives = 33/63 (52%)
Query: 103 CQDGFLACGDGA-CIERGLFCNGEKDCNDGSDENTCDSENDPNRAP--PCDPAVCVLPDC 159
C + C DGA C+ + C+GEKDC DGSDE+ C D AP PC +C+
Sbjct: 90 CPRTHMPCRDGAECVAQEYVCDGEKDCADGSDEDECAQLCD---APEYPCGLGICLNASL 146
Query: 160 FCS 162
CS
Sbjct: 147 VCS 149
>MGI|MGI:96828 [details] [associations]
symbol:Lrp1 "low density lipoprotein receptor-related protein
1" species:10090 "Mus musculus" [GO:0002020 "protease binding"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0005905 "coated pit" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0006898 "receptor-mediated
endocytosis" evidence=ISO;IDA] [GO:0007205 "protein kinase
C-activating G-protein coupled receptor signaling pathway"
evidence=ISO] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=ISO]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IMP] [GO:0014912 "negative regulation of smooth muscle
cell migration" evidence=IMP] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030136
"clathrin-coated vesicle" evidence=ISO] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=IDA]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032370 "positive
regulation of lipid transport" evidence=IMP] [GO:0032374
"regulation of cholesterol transport" evidence=IMP] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0032429 "regulation of
phospholipase A2 activity" evidence=IMP] [GO:0032956 "regulation of
actin cytoskeleton organization" evidence=IMP] [GO:0034185
"apolipoprotein binding" evidence=ISO] [GO:0035909 "aorta
morphogenesis" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043277 "apoptotic cell clearance" evidence=IMP]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0051222 "positive regulation of protein transport"
evidence=ISO] [GO:0097242 "beta-amyloid clearance" evidence=IMP]
[GO:2000587 "negative regulation of platelet-derived growth factor
receptor-beta signaling pathway" evidence=IMP] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002172 InterPro:IPR018097
Pfam:PF00057 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50068 SMART:SM00179 SMART:SM00181 SMART:SM00192
InterPro:IPR000033 InterPro:IPR000152 MGI:MGI:96828 GO:GO:0005634
GO:GO:0006898 GO:GO:0048471 GO:GO:0005887 GO:GO:0008283
GO:GO:0007205 GO:GO:0007568 GO:GO:0043025 GO:GO:0005768
GO:GO:0030425 Gene3D:2.120.10.30 InterPro:IPR011042 SMART:SM00135
PROSITE:PS51120 GO:GO:0008203 GO:GO:0005905 GO:GO:0005509
GO:GO:0030136 GO:GO:0042157 GO:GO:0010875 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0014912 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 PROSITE:PS00010
GO:GO:0032956 GO:GO:0035909 GO:GO:0030178 InterPro:IPR009030
SUPFAM:SSF57184 GO:GO:0043277 GO:GO:0051222 Pfam:PF00058
InterPro:IPR006150 SMART:SM00289 GeneTree:ENSGT00700000104037
HSSP:Q07954 eggNOG:NOG235850 HOGENOM:HOG000230574
HOVERGEN:HBG006292 OrthoDB:EOG42BX7K CTD:4035 KO:K04550
GO:GO:0097242 GO:GO:2000587 GO:GO:0032429 EMBL:X67469 EMBL:AF367720
EMBL:AF369477 EMBL:AF369389 EMBL:AF369390 EMBL:AF369391
EMBL:AF369392 EMBL:AF369393 EMBL:AF369394 EMBL:AF369395
EMBL:AF369396 EMBL:AF369397 EMBL:AF369398 EMBL:AF369399
EMBL:AF369400 EMBL:AF369401 EMBL:AF369402 EMBL:AF369403
EMBL:AF369404 EMBL:AF369405 EMBL:AF369406 EMBL:AF369407
EMBL:AF369408 EMBL:AF369409 EMBL:AF369410 EMBL:AF369411
EMBL:AF369412 EMBL:AF369413 EMBL:AF369414 EMBL:AF369415
EMBL:AF369416 EMBL:AF369417 EMBL:AF369418 EMBL:AF369419
EMBL:AF369420 EMBL:AF369421 EMBL:AF369422 EMBL:AF369423
EMBL:AF369424 EMBL:AF369425 EMBL:AF369426 EMBL:AF369427
EMBL:AF369428 EMBL:AF369429 EMBL:AF369430 EMBL:AF369431
EMBL:AF369432 EMBL:AF369433 EMBL:AF369434 EMBL:AF369435
EMBL:AF369436 EMBL:AF369437 EMBL:AF369438 EMBL:AF369439
EMBL:AF369440 EMBL:AF369441 EMBL:AF369442 EMBL:AF369443
EMBL:AF369444 EMBL:AF369445 EMBL:AF369446 EMBL:AF369447
EMBL:AF369448 EMBL:AF369449 EMBL:AF369450 EMBL:AF369451
EMBL:AF369452 EMBL:AF369453 EMBL:AF369454 EMBL:AF369455
EMBL:AF369456 EMBL:AF369457 EMBL:AF369458 EMBL:AF369459
EMBL:AF369460 EMBL:AF369461 EMBL:AF369462 EMBL:AF369463
EMBL:AF369464 EMBL:AF369465 EMBL:AF369466 EMBL:AF369467
EMBL:AF369468 EMBL:AF369469 EMBL:AF369470 EMBL:AF369471
EMBL:AF369472 EMBL:AF369473 EMBL:AF369474 EMBL:AF369475
EMBL:AF369476 IPI:IPI00119063 PIR:S25111 RefSeq:NP_032538.2
UniGene:Mm.271854 ProteinModelPortal:Q91ZX7 SMR:Q91ZX7
DIP:DIP-47785N IntAct:Q91ZX7 STRING:Q91ZX7 PhosphoSite:Q91ZX7
PaxDb:Q91ZX7 PRIDE:Q91ZX7 Ensembl:ENSMUST00000049149 GeneID:16971
KEGG:mmu:16971 UCSC:uc007hjx.1 InParanoid:Q91ZX7 NextBio:291026
Bgee:Q91ZX7 Genevestigator:Q91ZX7 Uniprot:Q91ZX7
Length = 4545
Score = 127 (49.8 bits), Expect = 0.00097, P = 0.00097
Identities = 43/145 (29%), Positives = 65/145 (44%)
Query: 41 EGDN-CRDVIQCTSSGL--QAIRCPAGLYFDIEKQTCD-------WK-GAVKNCKLKNKE 89
+GDN C D T + QA R P G + D + D W+ +C + E
Sbjct: 1036 DGDNDCGDYSDETHANCTNQATRPPGGCHSDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE 1095
Query: 90 RKVKPLLYTDEPLCQDGFLACGDGA-CIERGLFCNGEKDCNDGSDENTCDSENDPNRAPP 148
+ + + + +P + G C D A CI + C+G+ DC D SDE C++ + P
Sbjct: 1096 KSCEGVTHVCDPNVKFG---CKDSARCISKAWVCDGDSDCEDNSDEENCEALACRPPSHP 1152
Query: 149 C--DPAVCVLPDCFCSEDGTYIPGD 171
C + +VC+ PD C DG GD
Sbjct: 1153 CANNTSVCLPPDKLC--DGKDDCGD 1175
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.449 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 476 462 0.00096 118 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 630 (67 KB)
Total size of DFA: 364 KB (2178 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.66u 0.09s 40.75t Elapsed: 00:00:30
Total cpu time: 40.67u 0.09s 40.76t Elapsed: 00:00:30
Start: Thu Aug 15 14:40:44 2013 End: Thu Aug 15 14:41:14 2013