Query psy16059
Match_columns 67
No_of_seqs 172 out of 1072
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 19:48:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16059.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16059hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lkn_A AH receptor-interacting 99.8 2E-20 6.8E-25 106.3 6.8 66 1-66 10-78 (165)
2 1yat_A FK506 binding protein; 99.8 6.9E-19 2.4E-23 94.2 9.1 65 1-65 6-70 (113)
3 2ppn_A FK506-binding protein 1 99.8 2.8E-19 9.6E-24 94.8 7.4 65 2-66 1-65 (107)
4 3kz7_A FK506-binding protein 3 99.8 9.5E-19 3.3E-23 94.3 9.4 65 2-66 5-76 (119)
5 3o5e_A Peptidyl-prolyl CIS-tra 99.8 7.1E-19 2.4E-23 97.8 8.5 65 2-66 36-100 (144)
6 3o5q_A Peptidyl-prolyl CIS-tra 99.8 5.5E-19 1.9E-23 96.5 7.5 65 2-66 20-84 (128)
7 1r9h_A FKB-6, FK506 binding pr 99.8 1.4E-18 4.7E-23 95.7 7.5 66 1-66 14-79 (135)
8 2y78_A Peptidyl-prolyl CIS-tra 99.8 6.4E-18 2.2E-22 93.0 9.3 65 1-66 28-92 (133)
9 2lgo_A FKBP; infectious diseas 99.8 2.5E-18 8.7E-23 94.2 7.3 65 1-65 22-88 (130)
10 1u79_A FKBP-type peptidyl-prol 99.8 3.7E-18 1.2E-22 93.3 7.0 64 1-65 12-75 (129)
11 3uf8_A Ubiquitin-like protein 99.7 2.7E-17 9.3E-22 96.1 8.7 65 1-66 104-168 (209)
12 3b7x_A FK506-binding protein 6 99.7 8.6E-18 2.9E-22 92.4 5.6 65 1-66 26-91 (134)
13 2f4e_A ATFKBP42; FKBP-like, al 99.7 5.3E-17 1.8E-21 93.1 9.1 65 1-66 49-115 (180)
14 4dip_A Peptidyl-prolyl CIS-tra 99.7 5.7E-17 2E-21 88.0 8.6 65 1-66 12-81 (125)
15 1q1c_A FK506-binding protein 4 99.7 1.3E-16 4.4E-21 96.5 9.5 66 1-66 51-116 (280)
16 2vn1_A 70 kDa peptidylprolyl i 99.7 2.1E-16 7.2E-21 86.2 9.1 64 3-66 18-84 (129)
17 1jvw_A Macrophage infectivity 99.7 4.9E-17 1.7E-21 92.4 5.4 64 1-66 37-100 (167)
18 1fd9_A Protein (macrophage inf 99.7 1.3E-16 4.4E-21 93.6 6.6 62 1-65 106-167 (213)
19 1q6h_A FKBP-type peptidyl-prol 99.7 2.7E-16 9.2E-21 92.8 8.0 62 1-65 121-182 (224)
20 3oe2_A Peptidyl-prolyl CIS-tra 99.7 4.1E-16 1.4E-20 91.8 8.1 59 2-66 118-176 (219)
21 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 1.3E-16 4.4E-21 100.5 5.3 66 1-66 31-96 (457)
22 2awg_A 38 kDa FK-506 binding p 99.6 1.7E-15 5.7E-20 81.6 8.2 59 3-65 15-74 (118)
23 2jwx_A FKBP38NTD, FK506-bindin 99.6 1.8E-15 6.1E-20 85.3 7.7 61 2-66 43-105 (157)
24 3jxv_A 70 kDa peptidyl-prolyl 99.6 3.1E-15 1E-19 92.7 9.0 65 2-66 245-310 (356)
25 2if4_A ATFKBP42; FKBP-like, al 99.6 8.6E-16 3E-20 93.7 5.9 64 1-65 49-114 (338)
26 3jxv_A 70 kDa peptidyl-prolyl 99.6 4.1E-17 1.4E-21 101.1 0.0 66 1-66 11-76 (356)
27 2d9f_A FK506-binding protein 8 99.6 2.8E-15 9.6E-20 82.4 6.6 59 3-65 19-78 (135)
28 2pbc_A FK506-binding protein 2 99.6 9.3E-15 3.2E-19 76.7 7.2 54 13-66 2-55 (102)
29 4dt4_A FKBP-type 16 kDa peptid 99.5 7.2E-14 2.4E-18 79.5 5.2 51 16-66 24-74 (169)
30 3pr9_A FKBP-type peptidyl-prol 99.4 2.4E-13 8.2E-18 76.6 5.2 48 17-65 2-62 (157)
31 1hxv_A Trigger factor; FKBP fo 99.4 2.3E-13 7.8E-18 73.0 4.8 47 16-65 29-75 (113)
32 1q1c_A FK506-binding protein 4 99.4 1.3E-12 4.6E-17 79.0 7.9 59 1-65 168-229 (280)
33 2kr7_A FKBP-type peptidyl-prol 99.4 1.4E-12 4.7E-17 73.0 7.2 50 16-66 6-56 (151)
34 1ix5_A FKBP; ppiase, isomerase 99.4 4.8E-13 1.6E-17 74.8 4.3 49 17-65 2-63 (151)
35 2kfw_A FKBP-type peptidyl-prol 99.4 1.7E-12 6E-17 75.3 6.6 48 17-65 3-50 (196)
36 1p5q_A FKBP52, FK506-binding p 99.4 3.6E-12 1.2E-16 77.5 7.8 59 2-66 26-87 (336)
37 2k8i_A SLYD, peptidyl-prolyl C 99.4 2E-12 6.9E-17 73.6 6.2 49 17-66 3-51 (171)
38 3prb_A FKBP-type peptidyl-prol 99.3 1.4E-12 4.7E-17 77.3 5.3 49 17-66 2-63 (231)
39 3cgm_A SLYD, peptidyl-prolyl C 99.1 1E-10 3.5E-15 65.9 4.9 44 17-66 3-46 (158)
40 1kt0_A FKBP51, 51 kDa FK506-bi 98.9 8.5E-09 2.9E-13 64.9 7.7 59 2-66 147-208 (457)
41 1w26_A Trigger factor, TF; cha 98.8 3.3E-09 1.1E-13 67.3 4.5 47 16-65 157-203 (432)
42 1t11_A Trigger factor, TF; hel 98.8 2.9E-09 9.8E-14 66.9 3.3 47 16-65 160-206 (392)
43 3gty_X Trigger factor, TF; cha 97.2 0.0003 1E-08 44.8 3.3 43 17-65 155-197 (433)
44 3u7z_A Putative metal binding 50.3 23 0.00079 18.1 3.2 20 10-29 80-99 (101)
45 1o65_A Hypothetical protein YI 46.4 8.3 0.00028 22.9 1.3 23 2-28 155-177 (246)
46 1oru_A YUAD protein; structura 45.7 12 0.00042 21.1 1.9 21 2-26 162-182 (195)
47 3fm3_A Methionine aminopeptida 44.8 40 0.0014 20.8 4.2 33 14-53 118-150 (358)
48 1xd3_A Ubiquitin carboxyl-term 39.0 23 0.00079 20.7 2.4 22 17-38 160-182 (230)
49 1cmx_A Protein (ubiquitin YUH1 35.0 21 0.00073 21.0 1.8 22 17-38 157-179 (235)
50 3htx_A HEN1; HEN1, small RNA m 31.6 52 0.0018 23.5 3.4 49 16-64 560-636 (950)
51 3hks_A EIF-5A-2, eukaryotic tr 30.1 76 0.0026 17.7 5.0 20 24-43 64-84 (167)
52 1wr3_A Ubiquitin-protein ligas 27.3 6.3 0.00022 16.0 -1.0 13 52-64 1-13 (36)
53 1wr4_A Ubiquitin-protein ligas 27.0 6.6 0.00022 15.8 -1.0 13 52-64 1-13 (36)
54 1ueb_A EF-P, TT0860, elongatio 24.6 1E+02 0.0035 17.3 4.5 18 25-42 37-55 (184)
55 3fo8_D Tail sheath protein GP1 23.6 1.3E+02 0.0045 18.3 3.9 25 3-30 17-41 (283)
56 2qqr_A JMJC domain-containing 23.3 84 0.0029 16.5 2.7 22 17-42 64-85 (118)
57 3r8s_P 50S ribosomal protein L 22.9 93 0.0032 16.3 3.0 15 17-31 19-33 (114)
58 2k4v_A Uncharacterized protein 22.7 81 0.0028 16.9 2.5 24 17-41 35-58 (125)
59 3er0_A Eukaryotic translation 22.1 1.1E+02 0.0039 17.0 4.4 20 24-43 66-86 (167)
60 3a5z_B EF-P, elongation factor 21.7 1.2E+02 0.0041 17.2 3.8 18 25-42 42-60 (191)
61 2vo8_A EXO-alpha-sialidase; hy 21.5 1.1E+02 0.0038 16.7 3.3 27 5-31 79-105 (143)
62 3ihr_A Ubiquitin carboxyl-term 21.5 48 0.0017 20.6 1.7 21 18-38 156-177 (328)
63 3isy_A Bsupi, intracellular pr 20.0 1.1E+02 0.0038 16.0 4.2 33 19-51 16-48 (120)
No 1
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.82 E-value=2e-20 Score=106.26 Aligned_cols=66 Identities=26% Similarity=0.482 Sum_probs=59.4
Q ss_pred CCeEEEEEecCCCccC-CCCCCEEEEEEEEEeC--CCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 1 MGVDVETLSPGDGQTY-PKPGQVVVVHYTGTLT--DGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~-~~~gd~V~v~y~~~~~--dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
.||+|+++++|+|... +..||.|++||++++. ||++||||+.+++|+.|.+|.+++|+||+++|..
T Consensus 10 ~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~ 78 (165)
T 2lkn_A 10 DGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCT 78 (165)
T ss_dssp TSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTT
T ss_pred CCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhc
Confidence 4899999999999742 3579999999999986 4999999999889999999999999999999964
No 2
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.80 E-value=6.9e-19 Score=94.18 Aligned_cols=65 Identities=58% Similarity=1.113 Sum_probs=60.5
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhc
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIA 65 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~ 65 (67)
+|++|+++++|+|...|+.||.|.+||++++.||++|++++..+.|+.|.+|.+++++||+++|.
T Consensus 6 ~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~ 70 (113)
T 1yat_A 6 GNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIP 70 (113)
T ss_dssp GGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGG
T ss_pred CCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHh
Confidence 58999999999998558999999999999988999999998766899999999999999999995
No 3
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.80 E-value=2.8e-19 Score=94.81 Aligned_cols=65 Identities=71% Similarity=1.245 Sum_probs=59.8
Q ss_pred CeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 2 GVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 2 Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
||+|+++++|+|...|+.||.|.+||++++.||++|++++..+.|+.|.+|.+++++||+++|..
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~g 65 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQ 65 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTT
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhC
Confidence 79999999999986699999999999999889999999986557999999999999999999853
No 4
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.80 E-value=9.5e-19 Score=94.29 Aligned_cols=65 Identities=42% Similarity=0.794 Sum_probs=59.7
Q ss_pred CeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCC-------CccEEEEeCCCCccHHHHHhhcC
Q psy16059 2 GVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDR-------GVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 2 Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~-------~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
||+|+++++|+|...|+.||.|.+||++++.||++|++|+.. +.|+.|.+|.+++++||+++|..
T Consensus 5 g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~g 76 (119)
T 3kz7_A 5 KYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLT 76 (119)
T ss_dssp SEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTT
T ss_pred ccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhC
Confidence 899999999999766999999999999998899999999853 47999999999999999999964
No 5
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.79 E-value=7.1e-19 Score=97.80 Aligned_cols=65 Identities=52% Similarity=0.879 Sum_probs=60.9
Q ss_pred CeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 2 GVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 2 Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
||+|+++++|+|..+|..||.|.+||++++.||++|++++..+.|+.|.+|.+++++||+++|..
T Consensus 36 gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~g 100 (144)
T 3o5e_A 36 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVAT 100 (144)
T ss_dssp SEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTT
T ss_pred eEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhC
Confidence 79999999999986699999999999999999999999987778999999999999999999964
No 6
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.79 E-value=5.5e-19 Score=96.51 Aligned_cols=65 Identities=52% Similarity=0.879 Sum_probs=60.5
Q ss_pred CeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 2 GVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 2 Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
||+|+++++|+|...|+.||.|.+||++++.||++|++++..+.|+.|.+|.+++++||+++|..
T Consensus 20 gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~g 84 (128)
T 3o5q_A 20 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVAT 84 (128)
T ss_dssp SEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTT
T ss_pred CEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhc
Confidence 79999999999986689999999999999999999999987668999999999999999999964
No 7
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.77 E-value=1.4e-18 Score=95.72 Aligned_cols=66 Identities=56% Similarity=0.922 Sum_probs=60.2
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
.||+|+++++|+|..+|+.||.|.+||++++.||++|++++..+.|+.|.+|.+++++||+++|..
T Consensus 14 ~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~g 79 (135)
T 1r9h_A 14 GGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVAT 79 (135)
T ss_dssp SSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTT
T ss_pred CcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhc
Confidence 489999999999975699999999999999889999999986558999999999999999999953
No 8
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.76 E-value=6.4e-18 Score=92.96 Aligned_cols=65 Identities=57% Similarity=0.975 Sum_probs=60.0
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
.|++|+++++|+|.. |+.||.|.++|++++.||++|++++..+.|+.|.+|.+++++||+++|..
T Consensus 28 ~gl~~~~l~~G~G~~-~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~g 92 (133)
T 2y78_A 28 SGLKYEDLTEGSGAE-ARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQG 92 (133)
T ss_dssp TSCEEEEEECCSSCB-CCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTT
T ss_pred CCEEEEEEEcCCCCC-CCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcC
Confidence 489999999999974 99999999999999889999999987668999999999999999999863
No 9
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.76 E-value=2.5e-18 Score=94.23 Aligned_cols=65 Identities=58% Similarity=1.135 Sum_probs=59.7
Q ss_pred CCeEEE--EEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhc
Q psy16059 1 MGVDVE--TLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIA 65 (67)
Q Consensus 1 ~Gv~~~--~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~ 65 (67)
+|++|+ ++++|+|...|+.||.|.++|++++.||++|++++..+.|+.|.+|.+++++||+++|.
T Consensus 22 ~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~ 88 (130)
T 2lgo_A 22 MSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVA 88 (130)
T ss_dssp SSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHH
T ss_pred CceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHh
Confidence 478888 99999998558999999999999988999999998876899999999999999999985
No 10
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.75 E-value=3.7e-18 Score=93.33 Aligned_cols=64 Identities=45% Similarity=0.846 Sum_probs=59.1
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhc
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIA 65 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~ 65 (67)
.||+|+++++|+|.. |+.||.|.+||++++.||++|++++..+.|+.|.+|.+++++||+++|.
T Consensus 12 ~Gl~~~~l~~G~G~~-~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~ 75 (129)
T 1u79_A 12 SGLAFCDKVVGYGPE-AVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGIL 75 (129)
T ss_dssp TSCEEEEEECCSSCB-CCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHH
T ss_pred CCeEEEEEEcCCCCC-CCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhc
Confidence 489999999999985 9999999999999988999999998655799999999999999999984
No 11
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.73 E-value=2.7e-17 Score=96.14 Aligned_cols=65 Identities=57% Similarity=0.975 Sum_probs=60.8
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
.|++|+++++|+|.. |..||.|.++|++++.||++|++++..+.|+.|.+|.+++++||+++|..
T Consensus 104 sGl~~~vl~~G~G~~-~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~g 168 (209)
T 3uf8_A 104 SGLKYEDLTEGSGAE-ARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQG 168 (209)
T ss_dssp TSCEEEEEECCCSCB-CCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTT
T ss_pred CceEEEEEEcCCCCc-CCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhC
Confidence 389999999999986 99999999999999999999999988778999999999999999999964
No 12
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.72 E-value=8.6e-18 Score=92.44 Aligned_cols=65 Identities=29% Similarity=0.455 Sum_probs=52.7
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeC-CCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLT-DGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~-dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
.||+|+++++|+|.. +..||.|.+||++++. +|++|++++..+.|+.|.+|.+++++||+++|..
T Consensus 26 ~gl~~~vl~~G~g~~-~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~g 91 (134)
T 3b7x_A 26 RGVLKDVIREGAGDL-VAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLS 91 (134)
T ss_dssp SSEEEEEEECCEEEE-CCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHT
T ss_pred CCEEEEEEEcCCCCC-CCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhC
Confidence 489999999999985 8899999999999988 6999999987668999999999999999999853
No 13
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.72 E-value=5.3e-17 Score=93.10 Aligned_cols=65 Identities=23% Similarity=0.407 Sum_probs=59.7
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeC-CCCEEeccCCCCccEEEEeCCC-CccHHHHHhhcC
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLT-DGTKFDSSRDRGVPFKFRLGKG-DVIKGWDHGIAQ 66 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~-dg~~~~~s~~~~~p~~~~lG~~-~~~~g~e~~l~~ 66 (67)
.||+|+++++|.|. .|..||.|.+||++++. +|++|++++..+.|+.|.+|.+ ++++||+++|..
T Consensus 49 ~gl~~~vl~~G~G~-~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~g 115 (180)
T 2f4e_A 49 EKVSKQIIKEGHGS-KPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVAS 115 (180)
T ss_dssp TTEEEEEEECCBSC-CBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTT
T ss_pred CceEEEEEeCCCCC-CCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhC
Confidence 38999999999998 59999999999999998 6999999988778999999998 999999999863
No 14
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.72 E-value=5.7e-17 Score=88.01 Aligned_cols=65 Identities=37% Similarity=0.671 Sum_probs=58.1
Q ss_pred CCeEEEEEecCC--CccCCCCCCEEEEEEEEEeC-CCCEEeccCC--CCccEEEEeCCCCccHHHHHhhcC
Q psy16059 1 MGVDVETLSPGD--GQTYPKPGQVVVVHYTGTLT-DGTKFDSSRD--RGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 1 ~Gv~~~~~~~g~--g~~~~~~gd~V~v~y~~~~~-dg~~~~~s~~--~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
.|++|+++++|+ +. .|+.||.|.+||++++. ||++|++++. .+.|+.|.+|.+++++||+++|..
T Consensus 12 ~gl~~~~l~~g~~~g~-~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~g 81 (125)
T 4dip_A 12 PEVKIEVLQKPFICHR-KTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKG 81 (125)
T ss_dssp CCCEEEEEECCSCCSC-CCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTT
T ss_pred CCeEEEEEEcCCCCCC-cCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhC
Confidence 379999999998 55 59999999999999998 9999999973 358999999999999999999963
No 15
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.70 E-value=1.3e-16 Score=96.54 Aligned_cols=66 Identities=55% Similarity=0.784 Sum_probs=61.1
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
.||+|+++++|+|..+|..||.|.+||++++.||++|++++..+.|+.|.+|.+++++||++||..
T Consensus 51 ~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~g 116 (280)
T 1q1c_A 51 EGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIAT 116 (280)
T ss_dssp SSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTT
T ss_pred CceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhc
Confidence 389999999999986699999999999999989999999987678999999999999999999963
No 16
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.70 E-value=2.1e-16 Score=86.21 Aligned_cols=64 Identities=52% Similarity=0.902 Sum_probs=54.9
Q ss_pred eEEEEEecC-CC-ccCCCCCCEEEEEEEEEe-CCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 3 VDVETLSPG-DG-QTYPKPGQVVVVHYTGTL-TDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 3 v~~~~~~~g-~g-~~~~~~gd~V~v~y~~~~-~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
++++++++| .| ...|+.||.|.+||++++ .||++|++++..+.|+.|.+|.+++++||+++|..
T Consensus 18 ~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~g 84 (129)
T 2vn1_A 18 VIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSS 84 (129)
T ss_dssp EEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTT
T ss_pred EEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhC
Confidence 456789976 44 235899999999999998 69999999987668999999999999999999863
No 17
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.68 E-value=4.9e-17 Score=92.40 Aligned_cols=64 Identities=44% Similarity=0.781 Sum_probs=57.8
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
.||+|+++++|+|...|..||.|.+||++++.||++|++++..+.|+.|.+ +++++||+++|..
T Consensus 37 sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~l--g~vI~G~eeaL~g 100 (167)
T 1jvw_A 37 SGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRP--NEVIKGWTEALQL 100 (167)
T ss_dssp TSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECG--GGSCHHHHHHHTT
T ss_pred CCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEe--CchhHHHHHHHcC
Confidence 489999999999985489999999999999889999999987668999999 6899999999853
No 18
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.67 E-value=1.3e-16 Score=93.59 Aligned_cols=62 Identities=37% Similarity=0.762 Sum_probs=57.1
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhc
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIA 65 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~ 65 (67)
.||+|+++++|+|.. |..||.|.+||++++.||++|++++..+.|+.|.+ +++|+||+++|.
T Consensus 106 sGl~y~vl~~G~G~~-p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~ 167 (213)
T 1fd9_A 106 SGLQYKVINSGNGVK-PGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQV--SQVIPGWTEALQ 167 (213)
T ss_dssp TSCEEEEEECCCSCC-CCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEG--GGSCHHHHHHHT
T ss_pred CccEEEEEecCCCcc-CCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEc--CchhhHHHHHHc
Confidence 389999999999984 99999999999999999999999987668999999 689999999985
No 19
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.67 E-value=2.7e-16 Score=92.83 Aligned_cols=62 Identities=45% Similarity=0.885 Sum_probs=57.4
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhc
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIA 65 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~ 65 (67)
.||+|+++++|+|.. |..||.|.+||++++.||++|++++..+.|+.|.+ +++|+||+++|.
T Consensus 121 sGl~y~vl~~G~G~~-p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~ 182 (224)
T 1q6h_A 121 TGLVYQVVEAGKGEA-PKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPGWTEGLK 182 (224)
T ss_dssp TSCEEEEEECCSSCC-CCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEG--GGSCHHHHHHGG
T ss_pred CceEEEEEecccCcc-ccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEc--CCcchhHHHHHc
Confidence 389999999999984 99999999999999989999999987778999999 689999999985
No 20
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.66 E-value=4.1e-16 Score=91.78 Aligned_cols=59 Identities=41% Similarity=0.754 Sum_probs=54.8
Q ss_pred CeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 2 GVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 2 Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
||+|+++++|+|.. |..||.|.+||++++.||++|++| +.|+.|.+| ++|+||+++|..
T Consensus 118 Gl~y~vl~~G~G~~-p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~g 176 (219)
T 3oe2_A 118 GILMTELTPGTGPK-PDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQN 176 (219)
T ss_dssp GCEEEEEECCCSCC-CCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHTT
T ss_pred CeEEEEEecCCCcc-CCCCCEEEEEEEEEECCCCEeecc---CCcEEEEec--chhHHHHHHHhC
Confidence 89999999999984 999999999999999999999998 489999996 899999999863
No 21
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.65 E-value=1.3e-16 Score=100.49 Aligned_cols=66 Identities=52% Similarity=0.857 Sum_probs=42.8
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
.||+|+++++|+|...|..||.|.+||++++.||++|++|+..+.|+.|.+|.+++++||+++|..
T Consensus 31 ~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~ 96 (457)
T 1kt0_A 31 RGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVAT 96 (457)
T ss_dssp --CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTT
T ss_pred CcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhh
Confidence 389999999999986699999999999999889999999988778999999999999999999963
No 22
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.64 E-value=1.7e-15 Score=81.56 Aligned_cols=59 Identities=36% Similarity=0.574 Sum_probs=54.3
Q ss_pred eEEEEEecCCCc-cCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhc
Q psy16059 3 VDVETLSPGDGQ-TYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIA 65 (67)
Q Consensus 3 v~~~~~~~g~g~-~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~ 65 (67)
++|+++++|+|. ..|+.||.|.+||++++.||++|+++ .|+.|.+|.+++++||+++|.
T Consensus 15 ~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~ 74 (118)
T 2awg_A 15 LRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVP 74 (118)
T ss_dssp EEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGG
T ss_pred EEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHh
Confidence 899999999986 35899999999999998899999973 799999999999999999985
No 23
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.63 E-value=1.8e-15 Score=85.28 Aligned_cols=61 Identities=36% Similarity=0.583 Sum_probs=54.9
Q ss_pred Ce-EEEEEecCCCc-cCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 2 GV-DVETLSPGDGQ-TYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 2 Gv-~~~~~~~g~g~-~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
|+ +|+++++|+|. ..|..||.|.+||++++.||++|+++ .|+.|.+|.+++++||+++|..
T Consensus 43 G~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~g 105 (157)
T 2jwx_A 43 GLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPL 105 (157)
T ss_dssp SSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTT
T ss_pred CCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcC
Confidence 55 89999999986 34899999999999998899999983 7999999999999999999863
No 24
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.62 E-value=3.1e-15 Score=92.69 Aligned_cols=65 Identities=34% Similarity=0.551 Sum_probs=59.2
Q ss_pred CeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccC-CCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 2 GVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSR-DRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 2 Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~-~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
|++++++++|.|..+|+.||.|++||++++.||++|+++. ..+.|+.|.+|.+++|+||+++|..
T Consensus 245 ~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~g 310 (356)
T 3jxv_A 245 KILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLN 310 (356)
T ss_dssp CEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESCTTSCCCEEETTTTSSCHHHHHHHTT
T ss_pred ceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccccCCcCEEEEECCCccchHHHHHHhC
Confidence 6899999999996679999999999999999999999984 4468999999999999999999964
No 25
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.61 E-value=8.6e-16 Score=93.67 Aligned_cols=64 Identities=23% Similarity=0.413 Sum_probs=58.4
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeC-CCCEEeccCCCCccEEEEeCCC-CccHHHHHhhc
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLT-DGTKFDSSRDRGVPFKFRLGKG-DVIKGWDHGIA 65 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~-dg~~~~~s~~~~~p~~~~lG~~-~~~~g~e~~l~ 65 (67)
.||.|+++++|.|. .|..||.|+|||++++. +|++|++++..+.|+.|.+|.+ ++|+||+++|.
T Consensus 49 ~~~~~~~~~~g~g~-~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~ 114 (338)
T 2if4_A 49 EKVSKQIIKEGHGS-KPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVA 114 (338)
T ss_dssp TTEEEEEEECCBSC-CCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHH
T ss_pred CCeEEEEEeCCCCC-CCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHh
Confidence 37999999999998 59999999999999998 4999999976668999999998 89999999985
No 26
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.61 E-value=4.1e-17 Score=101.05 Aligned_cols=66 Identities=58% Similarity=0.988 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
.||+|+++++|+|..+|..||.|.+||++++.||++|++|+..+.|+.|.+|.+++++||+++|..
T Consensus 11 ~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~g 76 (356)
T 3jxv_A 11 QGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKT 76 (356)
T ss_dssp ------------------------------------------------------------------
T ss_pred CCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhc
Confidence 489999999999966699999999999999999999999998778999999999999999999863
No 27
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=2.8e-15 Score=82.43 Aligned_cols=59 Identities=36% Similarity=0.574 Sum_probs=54.2
Q ss_pred eEEEEEecCCCc-cCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhc
Q psy16059 3 VDVETLSPGDGQ-TYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIA 65 (67)
Q Consensus 3 v~~~~~~~g~g~-~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~ 65 (67)
|+|+++++|+|. ..|+.||.|.+||++++.||++|+++ .|+.|.+|.+++++||+++|.
T Consensus 19 l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~ 78 (135)
T 2d9f_A 19 LRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVP 78 (135)
T ss_dssp SEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGG
T ss_pred EEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHh
Confidence 899999999986 34899999999999998899999972 799999999999999999985
No 28
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.58 E-value=9.3e-15 Score=76.74 Aligned_cols=54 Identities=50% Similarity=0.927 Sum_probs=48.3
Q ss_pred CccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 13 GQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 13 g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
|...++.||.|.+||++++.||++|++++..+.|+.|.+|.+++++||+++|..
T Consensus 2 ~g~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~g 55 (102)
T 2pbc_A 2 SPIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLG 55 (102)
T ss_dssp CCCCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTT
T ss_pred CCCcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhC
Confidence 334589999999999999889999999987668999999999999999999853
No 29
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.47 E-value=7.2e-14 Score=79.55 Aligned_cols=51 Identities=33% Similarity=0.576 Sum_probs=47.0
Q ss_pred CCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 16 YPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 16 ~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
.++.||.|++||++++.||++|++|+..++|+.|.+|.++++|||+++|..
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~g 74 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLG 74 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTT
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcC
Confidence 478999999999999999999999987668999999999999999999964
No 30
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.42 E-value=2.4e-13 Score=76.58 Aligned_cols=48 Identities=31% Similarity=0.602 Sum_probs=43.8
Q ss_pred CCCCCEEEEEEEEEeCCCCEEeccCCC-------------CccEEEEeCCCCccHHHHHhhc
Q psy16059 17 PKPGQVVVVHYTGTLTDGTKFDSSRDR-------------GVPFKFRLGKGDVIKGWDHGIA 65 (67)
Q Consensus 17 ~~~gd~V~v~y~~~~~dg~~~~~s~~~-------------~~p~~~~lG~~~~~~g~e~~l~ 65 (67)
++.||.|++||++++ ||++|++|+.. +.|+.|.+|.++++|||++||.
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~ 62 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAIL 62 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHH
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHc
Confidence 678999999999999 99999999752 3699999999999999999985
No 31
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.42 E-value=2.3e-13 Score=73.00 Aligned_cols=47 Identities=23% Similarity=0.605 Sum_probs=43.7
Q ss_pred CCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhc
Q psy16059 16 YPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIA 65 (67)
Q Consensus 16 ~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~ 65 (67)
.++.||.|+++|++++ ||++|++++ ..|+.|.+|.++++|||+++|.
T Consensus 29 ~~~~gD~V~v~Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~ 75 (113)
T 1hxv_A 29 KLANGDIAIIDFTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLI 75 (113)
T ss_dssp CCCSSEEEEEEEEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHH
T ss_pred CCCCCCEEEEEEEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHC
Confidence 4899999999999998 999999996 3899999999999999999985
No 32
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.40 E-value=1.3e-12 Score=78.97 Aligned_cols=59 Identities=25% Similarity=0.501 Sum_probs=53.7
Q ss_pred CCeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCC---ccHHHHHhhc
Q psy16059 1 MGVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGD---VIKGWDHGIA 65 (67)
Q Consensus 1 ~Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~---~~~g~e~~l~ 65 (67)
.|++++++++|+|...|+.||.|.+||++++ ||++|++ .|+.|.+|.++ +++||+++|.
T Consensus 168 ~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~~fd~-----~~~~f~lG~g~~~~~i~G~e~~l~ 229 (280)
T 1q1c_A 168 GGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQ-----RELRFEIGEGENLDLPYGLERAIQ 229 (280)
T ss_dssp SSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTEEEEE-----EEEEEETTCGGGGTCCHHHHHHHT
T ss_pred cceeEEeeecccccccccCCceEEEEEEEEe-CCEEEec-----CCeEEEecCCcccccchhHHHHHh
Confidence 3789999999999866899999999999998 9999997 48999999887 5999999995
No 33
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.40 E-value=1.4e-12 Score=72.98 Aligned_cols=50 Identities=18% Similarity=0.393 Sum_probs=45.7
Q ss_pred CCCCCCEEEEEEEEEeC-CCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 16 YPKPGQVVVVHYTGTLT-DGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 16 ~~~~gd~V~v~y~~~~~-dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
.++.||.|++||++++. ||++|++|+.. .|+.|.+|.++++|||+++|..
T Consensus 6 ~i~~gd~V~v~Y~g~~~~dG~~fdss~~~-~p~~f~~G~g~vipg~e~aL~g 56 (151)
T 2kr7_A 6 LESIKQAALIEYEVREQGSSIVLDSNISK-EPLEFIIGTNQIIAGLEKAVLK 56 (151)
T ss_dssp CTTSCCEEEEEEEEEESSCSCEEEESTTT-CCEEEETTCCCSCHHHHHHHTT
T ss_pred CCCCCCEEEEEEEEEECCCCCEEEeCCCC-cCEEEEECCCCccHHHHHHHcC
Confidence 47899999999999988 99999999864 7999999999999999999963
No 34
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.37 E-value=4.8e-13 Score=74.84 Aligned_cols=49 Identities=31% Similarity=0.653 Sum_probs=44.4
Q ss_pred CCCCCEEEEEEEEEeCCCCEEeccCC-------------CCccEEEEeCCCCccHHHHHhhc
Q psy16059 17 PKPGQVVVVHYTGTLTDGTKFDSSRD-------------RGVPFKFRLGKGDVIKGWDHGIA 65 (67)
Q Consensus 17 ~~~gd~V~v~y~~~~~dg~~~~~s~~-------------~~~p~~~~lG~~~~~~g~e~~l~ 65 (67)
++.||.|++||++++.||++|++|+. ...|+.|.+|.++++|||+++|.
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~ 63 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVL 63 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHH
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHc
Confidence 68899999999999889999999973 33699999999999999999995
No 35
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.37 E-value=1.7e-12 Score=75.27 Aligned_cols=48 Identities=25% Similarity=0.423 Sum_probs=44.8
Q ss_pred CCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhc
Q psy16059 17 PKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIA 65 (67)
Q Consensus 17 ~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~ 65 (67)
++++|.|+++|++++.||++|++|+.. .|+.|.+|.++++|||+++|.
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~ 50 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALE 50 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCTT-SCCEEESSSSSSCHHHHHHHS
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCC-CCEEEEECCCCcchHHHHHHc
Confidence 678999999999998899999999865 799999999999999999996
No 36
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.36 E-value=3.6e-12 Score=77.54 Aligned_cols=59 Identities=25% Similarity=0.540 Sum_probs=53.5
Q ss_pred CeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCC---ccHHHHHhhcC
Q psy16059 2 GVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGD---VIKGWDHGIAQ 66 (67)
Q Consensus 2 Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~---~~~g~e~~l~~ 66 (67)
||.++++++|.|..+|..|+.|++||++++ +|++||++ |+.|.+|.+. ++++|++||..
T Consensus 26 ~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-----~~~f~lG~g~~~~~~~~~e~al~~ 87 (336)
T 1p5q_A 26 GIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-----ELRFEIGEGENLDLPYGLERAIQR 87 (336)
T ss_dssp SEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTT
T ss_pred cEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-----CeEEEeCCCCccccchHHHHHHhc
Confidence 799999999999867999999999999998 99999985 8999999876 59999999863
No 37
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.36 E-value=2e-12 Score=73.64 Aligned_cols=49 Identities=24% Similarity=0.408 Sum_probs=45.1
Q ss_pred CCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 17 PKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 17 ~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
++.||.|+++|++++.||++|++|+.. .|+.|.+|.++++|||+++|..
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~G 51 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEG 51 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTT
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCC-cCEEEEECCCCcchHHHHHHcC
Confidence 678999999999998899999999864 7999999999999999999963
No 38
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.35 E-value=1.4e-12 Score=77.31 Aligned_cols=49 Identities=31% Similarity=0.601 Sum_probs=44.2
Q ss_pred CCCCCEEEEEEEEEeCCCCEEeccCCC-------------CccEEEEeCCCCccHHHHHhhcC
Q psy16059 17 PKPGQVVVVHYTGTLTDGTKFDSSRDR-------------GVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 17 ~~~gd~V~v~y~~~~~dg~~~~~s~~~-------------~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
++.||.|++||++++ ||++|++|+.. +.|+.|.+|.++++|||++||..
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~G 63 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILE 63 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcC
Confidence 678999999999999 99999999752 37999999999999999999963
No 39
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.11 E-value=1e-10 Score=65.86 Aligned_cols=44 Identities=20% Similarity=0.441 Sum_probs=40.7
Q ss_pred CCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhcC
Q psy16059 17 PKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIAQ 66 (67)
Q Consensus 17 ~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~~ 66 (67)
++.||.|+++|+++ .||++|++|+ +.|.+|.++++|||+++|..
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~G 46 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEG 46 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTT
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcC
Confidence 67899999999999 8999999986 89999999999999999963
No 40
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.89 E-value=8.5e-09 Score=64.94 Aligned_cols=59 Identities=31% Similarity=0.581 Sum_probs=51.4
Q ss_pred CeEEEEEecCCCccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCC---CccHHHHHhhcC
Q psy16059 2 GVDVETLSPGDGQTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKG---DVIKGWDHGIAQ 66 (67)
Q Consensus 2 Gv~~~~~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~---~~~~g~e~~l~~ 66 (67)
++.++++++|.|..+|..||.|++||++++ +|++|++ +++.|.+|.+ .++++|++||..
T Consensus 147 ~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g~~f~~-----~~~~f~~g~g~~~~v~~~~e~al~~ 208 (457)
T 1kt0_A 147 GIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GGRMFDC-----RDVAFTVGEGEDHDIPIGIDKALEK 208 (457)
T ss_dssp SEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TTEEEEE-----EEEEEETTCGGGGTCCHHHHHHHTT
T ss_pred ceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CCeEEec-----CceEEEeCCCccccCChHHHHHHHh
Confidence 567888999998878999999999999998 9999997 4699999966 489999999863
No 41
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=98.83 E-value=3.3e-09 Score=67.34 Aligned_cols=47 Identities=28% Similarity=0.681 Sum_probs=43.3
Q ss_pred CCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhc
Q psy16059 16 YPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIA 65 (67)
Q Consensus 16 ~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~ 65 (67)
.++.||.|++||+++. ||+.|++++. .|+.|.+|.++++|||+++|.
T Consensus 157 ~~~~gD~V~i~y~g~~-dG~~fd~~~~--~~~~~~lG~g~~ipgfee~L~ 203 (432)
T 1w26_A 157 AVEAEDRVTIDFTGSV-DGEEFEGGKA--SDFVLAMGQGRMIPGFEDGIK 203 (432)
T ss_dssp CCCTTCEEEECEEEES-SSCBCSSCCC--SSEEEETTSCCSCTTHHHHSS
T ss_pred CCCCCCEEEEEEEEee-CCeEccCCCc--cceEEEeCCCCcchHHHHHhC
Confidence 4889999999999995 9999999874 799999999999999999985
No 42
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.80 E-value=2.9e-09 Score=66.93 Aligned_cols=47 Identities=28% Similarity=0.724 Sum_probs=42.8
Q ss_pred CCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhc
Q psy16059 16 YPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIA 65 (67)
Q Consensus 16 ~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~ 65 (67)
.++.||.|++||+++. ||+.|+++.. .|+.|.+|.++++|||+++|.
T Consensus 160 ~~~~gD~V~i~y~g~~-dG~~fd~~~~--~~~~~~lG~g~~ipgfee~L~ 206 (392)
T 1t11_A 160 AAENGKRVSIDFVGSI-DGVEFEGGKA--ENFPLEMGAGRMIPGFEDGIV 206 (392)
T ss_dssp CCCTTCEEEEEEEEES-SSSCCTTCEE--EEEEEETTSCCBSTTSGGGTT
T ss_pred CCCCCCEEEEEEEEEE-CCEEccCCCc--cceEEEecCCCcchhHHHHhC
Confidence 3789999999999995 9999998853 799999999999999999985
No 43
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.18 E-value=0.0003 Score=44.78 Aligned_cols=43 Identities=14% Similarity=0.165 Sum_probs=36.0
Q ss_pred CCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCCCCccHHHHHhhc
Q psy16059 17 PKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGKGDVIKGWDHGIA 65 (67)
Q Consensus 17 ~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~~~~~~g~e~~l~ 65 (67)
++.||.|+++|.++. ||..|+++.. .++.+.+|.+. + |+++|.
T Consensus 155 a~~gD~V~id~~~~~-dG~~~~~~~~--~~~~l~~g~~~--~-fe~~li 197 (433)
T 3gty_X 155 AEAGDLVRVNMEVYN-EEGKKLTSRE--YEYVISEDEDR--P-FVKDLV 197 (433)
T ss_dssp CCTTSEEEEEEEEEC-TTSCEEEEEE--EEEECCSSCCC--T-THHHHT
T ss_pred cCCCCEEEEEEEEEE-CCEECcCCCC--CCeEEEecCCc--h-HHHHhC
Confidence 688999999999984 9999998754 67888888876 3 888875
No 44
>3u7z_A Putative metal binding protein rumgna_00854; the binding protein, transport protein, structural genomics, center for structural genomics; 1.30A {Ruminococcus gnavus}
Probab=50.32 E-value=23 Score=18.14 Aligned_cols=20 Identities=15% Similarity=0.112 Sum_probs=15.0
Q ss_pred cCCCccCCCCCCEEEEEEEE
Q psy16059 10 PGDGQTYPKPGQVVVVHYTG 29 (67)
Q Consensus 10 ~g~g~~~~~~gd~V~v~y~~ 29 (67)
.|.+..++..||.|.+.|+.
T Consensus 80 ~Ga~~~~v~dGD~i~~~~t~ 99 (101)
T 3u7z_A 80 TSADQTPVSDGDAFELTLKE 99 (101)
T ss_dssp SCGGGCBCCTTCEEEEEEEE
T ss_pred hchhheEecCCCEEEEEEec
Confidence 45555568899999998864
No 45
>1o65_A Hypothetical protein YIIM; structural genomics, unknown function; 2.33A {Escherichia coli} SCOP: b.58.1.2 PDB: 1o67_A
Probab=46.39 E-value=8.3 Score=22.86 Aligned_cols=23 Identities=13% Similarity=0.176 Sum_probs=18.0
Q ss_pred CeEEEEEecCCCccCCCCCCEEEEEEE
Q psy16059 2 GVDVETLSPGDGQTYPKPGQVVVVHYT 28 (67)
Q Consensus 2 Gv~~~~~~~g~g~~~~~~gd~V~v~y~ 28 (67)
|++++|+++|. +..||.|.+--.
T Consensus 155 G~y~rVl~~G~----V~~GD~v~l~~r 177 (246)
T 1o65_A 155 GWLYSVIAPGK----VSADAPLELVSR 177 (246)
T ss_dssp CEEEEEEECEE----EETTSCEEEEEC
T ss_pred EEEEEEeeCcE----EcCCCEEEEecC
Confidence 89999998764 677998887643
No 46
>1oru_A YUAD protein; structural genomics, cytosolic hypothetical protein, PSI, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.80A {Bacillus subtilis} SCOP: b.58.1.2
Probab=45.68 E-value=12 Score=21.07 Aligned_cols=21 Identities=29% Similarity=0.436 Sum_probs=16.9
Q ss_pred CeEEEEEecCCCccCCCCCCEEEEE
Q psy16059 2 GVDVETLSPGDGQTYPKPGQVVVVH 26 (67)
Q Consensus 2 Gv~~~~~~~g~g~~~~~~gd~V~v~ 26 (67)
|++++++++|. +..||.|.+.
T Consensus 162 G~~~rVl~~G~----I~~GD~v~l~ 182 (195)
T 1oru_A 162 GIVCIVERPGA----VYTGDEIEVH 182 (195)
T ss_dssp CEEEEEEECEE----EETTCEEEEE
T ss_pred cEEEEEecCce----EcCCCEEEEE
Confidence 78999998754 6779998875
No 47
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=44.83 E-value=40 Score=20.79 Aligned_cols=33 Identities=21% Similarity=0.359 Sum_probs=25.3
Q ss_pred ccCCCCCCEEEEEEEEEeCCCCEEeccCCCCccEEEEeCC
Q psy16059 14 QTYPKPGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRLGK 53 (67)
Q Consensus 14 ~~~~~~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~lG~ 53 (67)
....+.||.|.|++-+.+ ||..-|.+ .+|.+|.
T Consensus 118 ~~~L~~GDiV~ID~G~~~-dGY~sD~a------rT~~vg~ 150 (358)
T 3fm3_A 118 DIVLKEDDVLKIDFGTHS-DGRIMDSA------FTVAFKE 150 (358)
T ss_dssp CCBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECCG
T ss_pred CeEecCCCEEEEEeeEEE-CCEEEEEE------Eeccccc
Confidence 345789999999999987 89887753 5566763
No 48
>1xd3_A Ubiquitin carboxyl-terminal esterase L3; enzyme-ligand complex, active site crossover loop, hydrolase; HET: GVE; 1.45A {Homo sapiens} SCOP: d.3.1.6 PDB: 1uch_A*
Probab=38.95 E-value=23 Score=20.74 Aligned_cols=22 Identities=23% Similarity=0.537 Sum_probs=17.8
Q ss_pred CCCCCEEEEEEEEEeC-CCCEEe
Q psy16059 17 PKPGQVVVVHYTGTLT-DGTKFD 38 (67)
Q Consensus 17 ~~~gd~V~v~y~~~~~-dg~~~~ 38 (67)
|...+.+.+||.++.. ||.+++
T Consensus 160 p~~~~~~~~HFI~fV~~~G~LyE 182 (230)
T 1xd3_A 160 PSIDEKVDLHFIALVHVDGHLYE 182 (230)
T ss_dssp CCTTSCCCEEEEEEEEETTEEEE
T ss_pred CCCCCCcCeEEEEEEeeCCEEEE
Confidence 4556889999999987 888766
No 49
>1cmx_A Protein (ubiquitin YUH1-UBAL); ubiquitin hydrolase, deubiquitinating enzyme, cysteine protease, enzyme specificity; 2.25A {Synthetic} SCOP: d.3.1.6
Probab=35.00 E-value=21 Score=21.02 Aligned_cols=22 Identities=23% Similarity=0.481 Sum_probs=17.5
Q ss_pred CCCCCEEEEEEEEEeC-CCCEEe
Q psy16059 17 PKPGQVVVVHYTGTLT-DGTKFD 38 (67)
Q Consensus 17 ~~~gd~V~v~y~~~~~-dg~~~~ 38 (67)
|...+.+.+||.++.. ||.+++
T Consensus 157 p~~~~~~~~HFI~fV~~~G~LyE 179 (235)
T 1cmx_A 157 PEATADTNLHYITYVEENGGIFE 179 (235)
T ss_dssp CCTTSCCSEEEEEEEECSSEEEE
T ss_pred CCCCCCCCeEEEEEEeeCCEEEE
Confidence 4556789999999987 887765
No 50
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=31.56 E-value=52 Score=23.52 Aligned_cols=49 Identities=18% Similarity=0.280 Sum_probs=30.9
Q ss_pred CCCCCCEEEEEEEEEeC-CCCEEec----------------cCC-----------CCccEEEEeCCCCccHHHHHhh
Q psy16059 16 YPKPGQVVVVHYTGTLT-DGTKFDS----------------SRD-----------RGVPFKFRLGKGDVIKGWDHGI 64 (67)
Q Consensus 16 ~~~~gd~V~v~y~~~~~-dg~~~~~----------------s~~-----------~~~p~~~~lG~~~~~~g~e~~l 64 (67)
.+..|+.+.|.|+..+. +|+.-.. -|. ....+.|.+|.+.+.+-++-.+
T Consensus 560 ~i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV 636 (950)
T 3htx_A 560 SITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEV 636 (950)
T ss_dssp CCCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHH
T ss_pred ccCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhhee
Confidence 46889999999999875 3321111 010 1246788899888877776554
No 51
>3hks_A EIF-5A-2, eukaryotic translation initiation factor 5A-2; beta barrel, alternative splicing, hypusine, protein biosynthesis; 2.30A {Arabidopsis thaliana}
Probab=30.11 E-value=76 Score=17.70 Aligned_cols=20 Identities=10% Similarity=0.152 Sum_probs=13.9
Q ss_pred EEEEEEEeC-CCCEEeccCCC
Q psy16059 24 VVHYTGTLT-DGTKFDSSRDR 43 (67)
Q Consensus 24 ~v~y~~~~~-dg~~~~~s~~~ 43 (67)
.++.+++.. +|+.++.++..
T Consensus 64 ~vr~k~knl~TGk~~E~tf~s 84 (167)
T 3hks_A 64 KCHFVAIDIFTAKKLEDIVPS 84 (167)
T ss_dssp EEEEEEEETTTCCEEEEEEET
T ss_pred EEEEEEEEcCCCCEEEEEEcC
Confidence 566677666 88888777643
No 52
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=27.28 E-value=6.3 Score=15.97 Aligned_cols=13 Identities=23% Similarity=0.741 Sum_probs=8.2
Q ss_pred CCCCccHHHHHhh
Q psy16059 52 GKGDVIKGWDHGI 64 (67)
Q Consensus 52 G~~~~~~g~e~~l 64 (67)
|...|.+||++..
T Consensus 1 g~~~LP~GWe~~~ 13 (36)
T 1wr3_A 1 GSPPLPPGWEEKV 13 (36)
T ss_dssp CCSCSCTTEEEEE
T ss_pred CCCCCCCCCEEEE
Confidence 3456777777654
No 53
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=27.00 E-value=6.6 Score=15.78 Aligned_cols=13 Identities=23% Similarity=0.649 Sum_probs=7.9
Q ss_pred CCCCccHHHHHhh
Q psy16059 52 GKGDVIKGWDHGI 64 (67)
Q Consensus 52 G~~~~~~g~e~~l 64 (67)
|...|.+||++..
T Consensus 1 g~~~LP~gWe~~~ 13 (36)
T 1wr4_A 1 GSPGLPSGWEERK 13 (36)
T ss_dssp CCTTCCTTEEEEE
T ss_pred CCCCCCCCCEEEE
Confidence 3456677777653
No 54
>1ueb_A EF-P, TT0860, elongation factor P; beta barrel, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.65A {Thermus thermophilus} SCOP: b.34.5.2 b.40.4.5 b.40.4.5 PDB: 3huw_V 3huy_V
Probab=24.62 E-value=1e+02 Score=17.34 Aligned_cols=18 Identities=11% Similarity=0.008 Sum_probs=11.0
Q ss_pred EEEEEEeC-CCCEEeccCC
Q psy16059 25 VHYTGTLT-DGTKFDSSRD 42 (67)
Q Consensus 25 v~y~~~~~-dg~~~~~s~~ 42 (67)
++.+++.. +|+.++.++.
T Consensus 37 vr~klknl~TG~~~e~tf~ 55 (184)
T 1ueb_A 37 VVAKFKNLETGATVERTFN 55 (184)
T ss_dssp EEEEEEESSSSCEEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEC
Confidence 44445544 7887777654
No 55
>3fo8_D Tail sheath protein GP18; mostly beta, viral structural protein, bacteriophage T4, viral protein; 1.80A {Enterobacteria phage T4}
Probab=23.62 E-value=1.3e+02 Score=18.27 Aligned_cols=25 Identities=20% Similarity=0.477 Sum_probs=19.2
Q ss_pred eEEEEEecCCCccCCCCCCEEEEEEEEE
Q psy16059 3 VDVETLSPGDGQTYPKPGQVVVVHYTGT 30 (67)
Q Consensus 3 v~~~~~~~g~g~~~~~~gd~V~v~y~~~ 30 (67)
|.+.|..+|.+- ..||.|.+.|...
T Consensus 17 i~~TIt~~GsnY---~VGD~i~Vky~~~ 41 (283)
T 3fo8_D 17 IEYTISTPGSNY---AVGDKITVKYVSD 41 (283)
T ss_dssp EEEEEEECCBSC---CTTCEEEEEETTE
T ss_pred EEEEEecCCCCc---eeCCEEEEEEcCc
Confidence 567788888765 5599999999553
No 56
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=23.31 E-value=84 Score=16.55 Aligned_cols=22 Identities=36% Similarity=0.619 Sum_probs=15.5
Q ss_pred CCCCCEEEEEEEEEeCCCCEEeccCC
Q psy16059 17 PKPGQVVVVHYTGTLTDGTKFDSSRD 42 (67)
Q Consensus 17 ~~~gd~V~v~y~~~~~dg~~~~~s~~ 42 (67)
|..|..|.+.+ .||.+.+..+.
T Consensus 64 P~~G~~V~V~W----~DG~~y~a~f~ 85 (118)
T 2qqr_A 64 PAEGEVVQVRW----TDGQVYGAKFV 85 (118)
T ss_dssp CCTTCEEEEEC----TTSCEEEEEEE
T ss_pred CCCCCEEEEEc----CCCCEeeeEEe
Confidence 78899998876 46766665543
No 57
>3r8s_P 50S ribosomal protein L19; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_N 1p86_N 2awb_P 2gya_N 2gyc_N 2aw4_P 2i2v_P 2j28_P 2i2t_P* 2qao_P* 2qba_P* 2qbc_P* 2qbe_P 2qbg_P 2qbi_P* 2qbk_P* 2qov_P 2qox_P 2qoz_P* 2qp1_P* ...
Probab=22.93 E-value=93 Score=16.32 Aligned_cols=15 Identities=27% Similarity=0.198 Sum_probs=12.9
Q ss_pred CCCCCEEEEEEEEEe
Q psy16059 17 PKPGQVVVVHYTGTL 31 (67)
Q Consensus 17 ~~~gd~V~v~y~~~~ 31 (67)
...||+|.++|...-
T Consensus 19 f~~GDtv~V~~~i~E 33 (114)
T 3r8s_P 19 FRPGDTVEVKVWVVE 33 (114)
T ss_dssp CCTTCEEEEEEEEEE
T ss_pred cCCCCEEEEEEEEec
Confidence 678999999998764
No 58
>2k4v_A Uncharacterized protein PA1076; structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Pseudomonas aeruginosa}
Probab=22.67 E-value=81 Score=16.87 Aligned_cols=24 Identities=29% Similarity=0.501 Sum_probs=15.1
Q ss_pred CCCCCEEEEEEEEEeCCCCEEeccC
Q psy16059 17 PKPGQVVVVHYTGTLTDGTKFDSSR 41 (67)
Q Consensus 17 ~~~gd~V~v~y~~~~~dg~~~~~s~ 41 (67)
|..|-.+.++..+.. +|+.|+.++
T Consensus 35 p~eG~~~~f~m~Gei-~gk~f~E~F 58 (125)
T 2k4v_A 35 AESGAYVHFDMDGEI-DGKPFSDSF 58 (125)
T ss_dssp TTTEEEEEEEEEEEE-TTEEEEEEE
T ss_pred CCCCceEEEEEEEEE-CCEecccee
Confidence 344555566666665 888888754
No 59
>3er0_A Eukaryotic translation initiation factor 5A-2; yeast, low resolution, acetylation, hypusine, phosphoprotein, protein biosynthesis; 3.35A {Saccharomyces cerevisiae}
Probab=22.08 E-value=1.1e+02 Score=16.97 Aligned_cols=20 Identities=20% Similarity=0.250 Sum_probs=13.5
Q ss_pred EEEEEEEeC-CCCEEeccCCC
Q psy16059 24 VVHYTGTLT-DGTKFDSSRDR 43 (67)
Q Consensus 24 ~v~y~~~~~-dg~~~~~s~~~ 43 (67)
.++.+++.. +|+.++.++..
T Consensus 66 ~vr~k~knl~TG~k~E~tf~s 86 (167)
T 3er0_A 66 KVHLVAIDIFTGKKLEDLSPS 86 (167)
T ss_dssp EEEEEEEESSSCCCEEEEEES
T ss_pred EEEEEEEEcCCCCEEEEEEcC
Confidence 456666655 88888877643
No 60
>3a5z_B EF-P, elongation factor P; aminoacyl-tRNA synthetase paralog, translation, tRNA, lysyl- synthetase, structural genomics, NPPSFA; HET: KAA; 2.50A {Escherichia coli}
Probab=21.69 E-value=1.2e+02 Score=17.17 Aligned_cols=18 Identities=11% Similarity=0.097 Sum_probs=10.8
Q ss_pred EEEEEEeC-CCCEEeccCC
Q psy16059 25 VHYTGTLT-DGTKFDSSRD 42 (67)
Q Consensus 25 v~y~~~~~-dg~~~~~s~~ 42 (67)
++.+++.. +|+.++.++.
T Consensus 42 vr~klknl~TG~~~e~tf~ 60 (191)
T 3a5z_B 42 ARVKLRRLLTGTRVEKTFK 60 (191)
T ss_dssp EEEEEEEGGGTEEEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEC
Confidence 44444443 7887777664
No 61
>2vo8_A EXO-alpha-sialidase; hydrolase, cohesin, high affinity, glycoside hydrolase; 1.7A {Clostridium perfringens} SCOP: b.2.2.2
Probab=21.55 E-value=1.1e+02 Score=16.68 Aligned_cols=27 Identities=26% Similarity=0.305 Sum_probs=18.9
Q ss_pred EEEEecCCCccCCCCCCEEEEEEEEEe
Q psy16059 5 VETLSPGDGQTYPKPGQVVVVHYTGTL 31 (67)
Q Consensus 5 ~~~~~~g~g~~~~~~gd~V~v~y~~~~ 31 (67)
++|+-..-|...+..+|.+.+.++.+.
T Consensus 79 VRIl~ASlG~~i~~~~dL~k~~lt~Ks 105 (143)
T 2vo8_A 79 VRILVASLGNEIEKDSDLVKVNLTPKI 105 (143)
T ss_dssp EEEEEEESSSCBCTTCEEEEEEEEECS
T ss_pred EEEEEhhcCCCCCCcccEEEEEEEeec
Confidence 445544446555778999999998874
No 62
>3ihr_A Ubiquitin carboxyl-terminal hydrolase isozyme L5; center for eukaryotic structural genomics, UCH37, UCH-L5, UB hydrolase, proteasome, INO80; 2.95A {Homo sapiens}
Probab=21.50 E-value=48 Score=20.56 Aligned_cols=21 Identities=10% Similarity=0.354 Sum_probs=12.6
Q ss_pred CCCCEEEEEEEEEeC-CCCEEe
Q psy16059 18 KPGQVVVVHYTGTLT-DGTKFD 38 (67)
Q Consensus 18 ~~gd~V~v~y~~~~~-dg~~~~ 38 (67)
...|.+.+||.++.. ||.+++
T Consensus 156 ~~~d~~~~HFIafV~~dG~LyE 177 (328)
T 3ihr_A 156 SAKEEDAFHFVSYVPVNGRLYE 177 (328)
T ss_dssp ------CEEEEEEEEETTEEEE
T ss_pred CCCcCcceeEEEEEeeCCEEEE
Confidence 335667799999987 887755
No 63
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=20.00 E-value=1.1e+02 Score=16.03 Aligned_cols=33 Identities=6% Similarity=0.069 Sum_probs=18.4
Q ss_pred CCCEEEEEEEEEeCCCCEEeccCCCCccEEEEe
Q psy16059 19 PGQVVVVHYTGTLTDGTKFDSSRDRGVPFKFRL 51 (67)
Q Consensus 19 ~gd~V~v~y~~~~~dg~~~~~s~~~~~p~~~~l 51 (67)
.|+.+.+.++..+.....+.=.+..+.-+.|.+
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v 48 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVV 48 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEE
Confidence 456777777777654444444444444455544
Done!