Query psy16062
Match_columns 396
No_of_seqs 291 out of 2137
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 19:51:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16062.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16062hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223|consensus 100.0 2.7E-48 5.8E-53 357.0 13.7 204 1-215 23-228 (238)
2 KOG0224|consensus 100.0 2.2E-46 4.8E-51 345.6 12.5 218 1-218 44-280 (316)
3 COG0580 GlpF Glycerol uptake f 100.0 2.5E-44 5.5E-49 329.5 15.9 211 1-213 17-240 (241)
4 PLN00184 aquaporin NIP1; Provi 100.0 4.2E-43 9E-48 334.4 18.4 210 1-216 66-276 (296)
5 PTZ00016 aquaglyceroporin; Pro 100.0 9.7E-43 2.1E-47 332.9 17.6 213 2-216 63-293 (294)
6 PRK05420 aquaporin Z; Provisio 100.0 4.8E-42 1E-46 318.3 17.8 211 2-215 15-230 (231)
7 PLN00182 putative aquaporin NI 100.0 3.7E-41 8.1E-46 319.1 19.0 201 1-214 54-255 (283)
8 PLN00026 aquaporin NIP; Provi 100.0 1.6E-41 3.6E-46 322.6 16.0 203 2-218 84-287 (298)
9 PF00230 MIP: Major intrinsic 100.0 8.5E-42 1.8E-46 317.7 12.1 199 2-208 21-227 (227)
10 PLN00166 aquaporin TIP2; Provi 100.0 8.4E-41 1.8E-45 312.8 18.7 202 2-215 31-239 (250)
11 PLN00027 aquaporin TIP; Provis 100.0 1.2E-40 2.5E-45 312.9 18.9 202 2-215 33-241 (252)
12 PLN00167 aquaporin TIP5; Provi 100.0 9.7E-41 2.1E-45 313.2 17.4 202 2-215 35-242 (256)
13 cd00333 MIP Major intrinsic pr 100.0 3.2E-39 6.9E-44 300.3 16.9 210 2-211 13-228 (228)
14 PLN00183 putative aquaporin NI 100.0 9.3E-38 2E-42 294.9 16.6 200 2-215 58-258 (274)
15 TIGR00861 MIP MIP family chann 100.0 3.9E-37 8.4E-42 284.0 16.0 199 2-208 9-216 (216)
16 KOG0224|consensus 100.0 2.1E-34 4.6E-39 266.3 9.1 156 241-396 23-186 (316)
17 PLN00026 aquaporin NIP; Provi 100.0 1.8E-32 3.9E-37 260.7 19.7 219 105-350 59-282 (298)
18 PLN00183 putative aquaporin NI 100.0 1.2E-31 2.5E-36 253.5 18.9 214 113-353 41-259 (274)
19 PLN00182 putative aquaporin NI 100.0 4.4E-31 9.6E-36 250.3 19.4 216 108-350 34-254 (283)
20 cd00333 MIP Major intrinsic pr 100.0 7.8E-31 1.7E-35 243.9 18.2 219 118-347 1-227 (228)
21 PLN00184 aquaporin NIP1; Provi 100.0 8.2E-30 1.8E-34 243.2 20.5 219 113-350 50-273 (296)
22 COG0580 GlpF Glycerol uptake f 100.0 1.8E-30 3.9E-35 238.2 12.3 148 248-396 3-154 (241)
23 TIGR00861 MIP MIP family chann 100.0 6.9E-29 1.5E-33 229.0 17.6 204 122-344 1-215 (216)
24 PLN00166 aquaporin TIP2; Provi 100.0 4.2E-28 9E-33 227.2 20.0 215 114-352 15-239 (250)
25 KOG0223|consensus 100.0 5.7E-28 1.2E-32 222.5 13.9 144 245-396 6-150 (238)
26 PTZ00016 aquaglyceroporin; Pro 100.0 3.3E-27 7.1E-32 226.0 18.2 226 114-352 47-292 (294)
27 PLN00027 aquaporin TIP; Provis 100.0 1.2E-26 2.5E-31 218.2 21.5 212 115-350 18-239 (252)
28 PLN00167 aquaporin TIP5; Provi 100.0 4E-27 8.6E-32 221.2 18.1 217 113-354 18-244 (256)
29 PRK05420 aquaporin Z; Provisio 99.9 9.9E-27 2.1E-31 215.9 18.8 221 117-351 2-229 (231)
30 PF00230 MIP: Major intrinsic 99.9 5.1E-27 1.1E-31 218.4 11.3 145 244-396 2-153 (227)
31 PF03773 DUF318: Predicted per 91.3 2.5 5.5E-05 41.0 11.4 177 169-346 93-306 (307)
32 COG2116 FocA Formate/nitrite f 84.5 28 0.0006 33.1 13.1 189 20-216 63-261 (265)
33 PRK11562 nitrite transporter N 79.8 22 0.00047 33.9 10.7 182 24-218 61-255 (268)
34 COG0701 Predicted permeases [G 69.6 1.2E+02 0.0025 29.8 13.8 101 168-268 102-206 (317)
35 PF09512 ThiW: Thiamine-precur 63.3 56 0.0012 28.2 8.3 25 324-348 123-147 (150)
36 PRK09713 focB putative formate 57.7 1.1E+02 0.0023 29.5 10.2 110 22-138 68-182 (282)
37 COG2116 FocA Formate/nitrite f 55.7 28 0.00062 33.0 5.8 60 283-345 65-125 (265)
38 PRK10805 formate transporter; 43.5 3.1E+02 0.0067 26.4 15.9 110 22-137 69-182 (285)
39 PF01226 Form_Nir_trans: Forma 43.4 1.2E+02 0.0025 28.6 7.9 104 285-395 60-168 (250)
40 PF03033 Glyco_transf_28: Glyc 41.7 9.3 0.0002 31.7 0.2 21 301-321 5-25 (139)
41 TIGR00790 fnt formate/nitrite 40.3 90 0.002 29.1 6.6 90 48-137 68-158 (239)
42 PF03616 Glt_symporter: Sodium 36.4 3.5E+02 0.0076 27.0 10.5 33 55-88 20-52 (368)
43 PF03033 Glyco_transf_28: Glyc 34.9 14 0.00031 30.5 0.3 20 41-60 6-25 (139)
44 PRK12446 undecaprenyldiphospho 33.3 10 0.00023 37.5 -0.9 22 299-320 6-27 (352)
45 TIGR02005 PTS-IIBC-alpha PTS s 33.0 6.1E+02 0.013 26.7 13.0 13 123-137 327-339 (524)
46 PRK15120 lipopolysaccharide AB 28.7 1.3E+02 0.0028 29.8 6.0 22 247-269 264-285 (366)
47 KOG3030|consensus 28.6 1.9E+02 0.0042 28.3 6.9 48 169-216 210-266 (317)
48 COG0306 PitA Phosphate/sulphat 26.5 6.3E+02 0.014 24.9 12.1 24 193-216 139-162 (326)
49 PF04632 FUSC: Fusaric acid re 25.0 8.5E+02 0.018 25.9 16.4 53 38-90 358-413 (650)
50 PF01226 Form_Nir_trans: Forma 24.2 3.9E+02 0.0084 25.1 8.0 116 22-139 58-173 (250)
51 PF05620 DUF788: Protein of un 23.3 50 0.0011 29.1 1.7 17 190-206 117-133 (170)
52 PRK10478 putative PTS system f 23.1 2.6E+02 0.0055 28.0 6.7 23 189-211 312-334 (359)
53 TIGR00790 fnt formate/nitrite 23.1 2.1E+02 0.0045 26.7 5.9 37 309-345 68-104 (239)
54 TIGR00770 Dcu anaerobic c4-dic 22.0 8.3E+02 0.018 24.9 10.4 35 22-57 18-52 (430)
55 PF03606 DcuC: C4-dicarboxylat 21.6 1.3E+02 0.0027 31.1 4.5 16 167-182 172-188 (465)
56 KOG1330|consensus 21.2 2.3E+02 0.005 29.4 6.1 27 189-215 187-213 (493)
No 1
>KOG0223|consensus
Probab=100.00 E-value=2.7e-48 Score=357.03 Aligned_cols=204 Identities=36% Similarity=0.682 Sum_probs=188.5
Q ss_pred CEEEEeecceecccc-CCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHH
Q psy16062 1 MLMFFGCMSLVQGFS-QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLI 79 (396)
Q Consensus 1 ~lv~~g~g~~~~~~~-~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~ 79 (396)
+|+|+||+++..+.. ..+.+.+++++++|+++++.+|+++++||||+|||||+++++.|++++.+++.|+.+|++|+++
T Consensus 23 ~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~isl~~~~~Y~vaQ~lGa~~ 102 (238)
T KOG0223|consen 23 LFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKISLFRAVAYIVAQLLGAIA 102 (238)
T ss_pred HHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCCcHHHhHHHHHHHHHHHHH
Confidence 367889999998772 3445899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHH-hccCCCCCCCCchhHHHHHHHH
Q psy16062 80 GVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCG-VWDSRNAKFGDSVAIKFALVIA 158 (396)
Q Consensus 80 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~-~~~~~~~~~~~~~~~~ig~~v~ 158 (396)
|+++++.+.+.+.. ..+.+.+.+.++.+.+|+++.|++.||.|+++++. .+|+|+. .+.|+.||+++.
T Consensus 103 g~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~---~~a~l~IG~~v~ 171 (238)
T KOG0223|consen 103 GAALLKVVTPGQYN--------RKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS---ELAPLAIGFSVG 171 (238)
T ss_pred HHHHHheecCcccc--------cCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc---ccHHHHHHHHHH
Confidence 99999999997522 23557777888899999999999999999999999 7788876 699999999999
Q ss_pred HHHHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcC
Q psy16062 159 LCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKD 215 (396)
Q Consensus 159 ~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~ 215 (396)
..++..+++||++|||||+|||+++.++|++|||||+||++|+++++++|++++.++
T Consensus 172 ~~~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 172 LNILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred HHHHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 999999999999999999999999999999999999999999999999999998887
No 2
>KOG0224|consensus
Probab=100.00 E-value=2.2e-46 Score=345.62 Aligned_cols=218 Identities=25% Similarity=0.432 Sum_probs=197.2
Q ss_pred CEEEEeecceeccccC--CCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHH
Q psy16062 1 MLMFFGCMSLVQGFSQ--TPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCL 78 (396)
Q Consensus 1 ~lv~~g~g~~~~~~~~--~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~ 78 (396)
+|+++|+|++++..-+ ...+++.+.++||++++..+|+.+++||||+|||||+++++.||++|+|.++|+++|++||+
T Consensus 44 vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~k~p~Y~~aQ~iGAF 123 (316)
T KOG0224|consen 44 VLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWKKFPVYVLAQFIGAF 123 (316)
T ss_pred HHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChhhhhHHHHHHHHHHH
Confidence 4789999999987633 33588999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccccccc------CCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHH
Q psy16062 79 IGVGLVNIITPEEILFPV------SSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIK 152 (396)
Q Consensus 79 ~g~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ 152 (396)
+|++.+|.+|++.+++.. ..+..+++.++++|.+..+.+++|+.|+++|.+|+.+++++.|+||+.+.++.|+.
T Consensus 124 ~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l~aI~D~rN~~p~g~~p~~ 203 (316)
T KOG0224|consen 124 LGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCLFAITDKRNPIPTGLHPLV 203 (316)
T ss_pred HHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhheeEEecCCCCCCcchhHHH
Confidence 999999999999886543 23456788999999999999999999999999999999999999997777799999
Q ss_pred HHHHHHHHHHhccCCccCccchhhhhHHHHhhc-----------cccccchhhhhhHHHHHHHHHHHHHHhhcCCCC
Q psy16062 153 FALVIALCSITVGPYTGASMNPARSLAPAIYSN-----------VWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDG 218 (396)
Q Consensus 153 ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~-----------~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~ 218 (396)
+|+.+.+..++.+.++|..+|||||||||++.. +-.+.|++|++|++|+++++++|++++.-+.++
T Consensus 204 iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai~G~~iY~~~Ig~h~~~ 280 (316)
T KOG0224|consen 204 IGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAILGGWIYDFFIGFHIPR 280 (316)
T ss_pred HHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhhhhhhhhhheeeeeccCCC
Confidence 999999999999999999999999999999831 114789999999999999999999988766553
No 3
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-44 Score=329.55 Aligned_cols=211 Identities=31% Similarity=0.477 Sum_probs=186.1
Q ss_pred CEEEEeecceeccc--c--CCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhh
Q psy16062 1 MLMFFGCMSLVQGF--S--QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLG 76 (396)
Q Consensus 1 ~lv~~g~g~~~~~~--~--~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lG 76 (396)
+|+++|+|+++... + ....++..++++||+++.+.+|+++++||||+|||||+++++.|+++|+|++.||++|++|
T Consensus 17 ~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp~~~v~~YivAQ~lG 96 (241)
T COG0580 17 LLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFPWRKVLPYIVAQVLG 96 (241)
T ss_pred HHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 36789999988765 2 2345888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHH
Q psy16062 77 CLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALV 156 (396)
Q Consensus 77 a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~ 156 (396)
|++|+.++|.++++...+.+.++....+.+++.|..+ +..++++.|+++|++|++.++..+|+++. ..+..|+.+|+.
T Consensus 97 A~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~-~~~~~fl~E~v~T~~L~~~Ila~~~~~~~-~~~~apl~iGll 174 (241)
T COG0580 97 AFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGY-SLGQAFLIEFVGTFVLVLGILALTDDGNA-NAGFAPLAIGLL 174 (241)
T ss_pred HHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcc-cHHHHHHHHHHHHHHHHHHHHHhhccCcc-cccchHHHHHHH
Confidence 9999999999999877643335566678888888754 89999999999999999999998865544 335999999999
Q ss_pred HHHHHHhccCCccCccchhhhhHHHHhhc---------cccccchhhhhhHHHHHHHHHHHHHHhh
Q psy16062 157 IALCSITVGPYTGASMNPARSLAPAIYSN---------VWTAHWIYWVAPILGSIVSTLLYKYVFS 213 (396)
Q Consensus 157 v~~~~~~~~~~tG~~lNPAr~lg~~~~~~---------~~~~~wvy~v~p~~Ga~la~~l~~~~~~ 213 (396)
+...+++.++.||.++|||||+|||+.+. ++.|.|+||++|++|+++++++|+.++.
T Consensus 175 v~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~ 240 (241)
T COG0580 175 VTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG 240 (241)
T ss_pred HHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999542 2358999999999999999999998764
No 4
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=4.2e-43 Score=334.37 Aligned_cols=210 Identities=30% Similarity=0.519 Sum_probs=176.9
Q ss_pred CEEEEeecceeccccC-CCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHH
Q psy16062 1 MLMFFGCMSLVQGFSQ-TPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLI 79 (396)
Q Consensus 1 ~lv~~g~g~~~~~~~~-~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~ 79 (396)
+|+|+|||+++..... ...+++.++++||+++++.+++++++||||+|||||+++++.|+++|++.+.|+++|++||++
T Consensus 66 lLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~~~~~~YiiaQllGA~l 145 (296)
T PLN00184 66 FLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTL 145 (296)
T ss_pred HHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 3678899887654322 223688899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHHH
Q psy16062 80 GVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIAL 159 (396)
Q Consensus 80 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v~~ 159 (396)
|+++++.+++..... ..........+.|. .+.+++++.|+++|++|+++++.+.++++. .....|+.||+++..
T Consensus 146 ga~~~~~l~~~~~~~---~~~~~~~~~~t~p~--~s~~~af~~E~i~TfvLv~~il~~~~~~~~-~~~~~~l~IG~~v~~ 219 (296)
T PLN00184 146 AAATLRLLFGLDHDV---CSGKHDVFIGSSPV--GSDLQAFVMEFIVTFYLMFIISGVATDNRA-IGELAGLAIGSTVLL 219 (296)
T ss_pred HHHHHHHHhcchhhc---cccccceeeccCcC--CcHHHHHHHHHHHHHHHHHHHHheeccCcC-CCcchHHHHHHHHHH
Confidence 999999998754321 11111112334443 489999999999999999999988654332 234789999999999
Q ss_pred HHHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcCC
Q psy16062 160 CSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDH 216 (396)
Q Consensus 160 ~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~ 216 (396)
.++..+++||++|||||||||+++.+.|+++||||+||++|+++++++|++++.++.
T Consensus 220 ~~~~~g~~TG~smNPAR~~GPal~~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~ 276 (296)
T PLN00184 220 NVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDK 276 (296)
T ss_pred HHHHhcccCccccCchhhHHHHHHhhcccccchHHhHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999986553
No 5
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=9.7e-43 Score=332.89 Aligned_cols=213 Identities=24% Similarity=0.369 Sum_probs=181.1
Q ss_pred EEEEeecceecccc-CCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHH
Q psy16062 2 LMFFGCMSLVQGFS-QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIG 80 (396)
Q Consensus 2 lv~~g~g~~~~~~~-~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g 80 (396)
|+|+|||++++... ..+.+.+.++++||+++++.+++++++||||+|||||+++++.|+++|++.+.|+++|++||++|
T Consensus 63 lvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~~~~YiiaQ~lGa~~g 142 (294)
T PTZ00016 63 LLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKKLPGYFVAQLLGAFVG 142 (294)
T ss_pred HHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 56788888765432 11336788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccccccccCC-------CCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHH
Q psy16062 81 VGLVNIITPEEILFPVSS-------AGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKF 153 (396)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~i 153 (396)
++++|.++++...+.... .+...+.+.+.| +.+..++++.|+++|++|+++++.++|+|++...+..|+.+
T Consensus 143 a~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p--~~s~~~a~~~E~i~T~iLv~~ila~~d~~~~~~~~~~pl~I 220 (294)
T PTZ00016 143 AACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYP--REGNFYAIFSELILTAILLLVILAITDPNNCPAFNYLPVAV 220 (294)
T ss_pred HHHHHHHhHHHHHhhcCcccccccccccccceeeCCC--CccHHHHHHHHHHHHHHHHHHHHHhccCccCCCcCcccHHH
Confidence 999999998754321110 122234556666 47899999999999999999999999988765445789999
Q ss_pred HHHHHHHHHhccCCccCccchhhhhHHHHhh----c--ccc----ccchhhhhhHHHHHHHHHHHHHHhhcCC
Q psy16062 154 ALVIALCSITVGPYTGASMNPARSLAPAIYS----N--VWT----AHWIYWVAPILGSIVSTLLYKYVFSKDH 216 (396)
Q Consensus 154 g~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~----~--~~~----~~wvy~v~p~~Ga~la~~l~~~~~~~~~ 216 (396)
|+.+...+++.+++||++||||||||||++. + .|+ ++||||+||++|+++++++|+++++|+.
T Consensus 221 Gl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aally~~ll~~~~ 293 (294)
T PTZ00016 221 GLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMFLYDKFIPPLI 293 (294)
T ss_pred HHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999986 2 454 6899999999999999999999998775
No 6
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=4.8e-42 Score=318.35 Aligned_cols=211 Identities=32% Similarity=0.554 Sum_probs=174.0
Q ss_pred EEEEeecceecccc--CCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHH
Q psy16062 2 LMFFGCMSLVQGFS--QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLI 79 (396)
Q Consensus 2 lv~~g~g~~~~~~~--~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~ 79 (396)
|+|+|||++..... .++.+++.++++||+++++.+++++++||+|+|||||+++++.|++++++.+.|+++|++||++
T Consensus 15 lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~~~Y~~aQ~lGa~~ 94 (231)
T PRK05420 15 LVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKELVPYIIAQVVGGIA 94 (231)
T ss_pred HHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHhHHHHHHHHHHHHH
Confidence 56788887654321 1223577889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccccccCC-CCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHH
Q psy16062 80 GVGLVNIITPEEILFPVSS-AGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIA 158 (396)
Q Consensus 80 g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v~ 158 (396)
|+++++.++++.......+ .....+...+.|. +.+..++++.|+++|++|+++++..+|+|+. .+..|+.+|+.+.
T Consensus 95 ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~--~~~~p~~iGl~v~ 171 (231)
T PRK05420 95 AAAVLYLIASGKAGFDLAGSGFASNGYGEHSPG-GYSLLAALVCEVVLTAFFLLVILGATDKRAP--AGFAPIAIGLALT 171 (231)
T ss_pred HHHHHHHHhCCccccccccccccccccccCCCC-cccHHHHHHHHHHHHHHHHHHHHHHhCCCCC--CcchHHHHHHHHH
Confidence 9999999987532110000 0111122223343 4578999999999999999999999887653 3478999999999
Q ss_pred HHHHhccCCccCccchhhhhHHHHhhccc--cccchhhhhhHHHHHHHHHHHHHHhhcC
Q psy16062 159 LCSITVGPYTGASMNPARSLAPAIYSNVW--TAHWIYWVAPILGSIVSTLLYKYVFSKD 215 (396)
Q Consensus 159 ~~~~~~~~~tG~~lNPAr~lg~~~~~~~~--~~~wvy~v~p~~Ga~la~~l~~~~~~~~ 215 (396)
..++..+++||++|||||||||++++++| +++|+||++|++|+++++++|+++++++
T Consensus 172 ~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 172 LIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred HHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999998877 4899999999999999999999987643
No 7
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=3.7e-41 Score=319.06 Aligned_cols=201 Identities=31% Similarity=0.521 Sum_probs=172.4
Q ss_pred CEEEEeecceeccccC-CCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHH
Q psy16062 1 MLMFFGCMSLVQGFSQ-TPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLI 79 (396)
Q Consensus 1 ~lv~~g~g~~~~~~~~-~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~ 79 (396)
+|+|+|||+++..... ...+.+.++++||+++++.+++++++||||+|||||+++++.|+++|++++.|+++|++|+++
T Consensus 54 lLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~~~~~~Yi~aQ~lGa~~ 133 (283)
T PLN00182 54 FIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWYQVPLYIGAQLTGSLL 133 (283)
T ss_pred HHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 3678899987754321 123577889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHHH
Q psy16062 80 GVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIAL 159 (396)
Q Consensus 80 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v~~ 159 (396)
|+++++.+++... .....+.|. .+.+++++.|+++|++|+++++.+.++++. ..+..|+.+|+.+..
T Consensus 134 ga~~~~~~~~~~~----------~~~~~~~p~--~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~-~~~~~~l~iGl~V~~ 200 (283)
T PLN00182 134 ASLTLRLMFNVTP----------EAFFGTTPT--DSSGQALVAEIIISFLLMFVISGVATDSRA-VGELAGIAVGMTIIL 200 (283)
T ss_pred HHHHHHHHhcccc----------cceeeCCCC--cchHHHHHHHHHHHHHHHHHHHhheecccc-CCcchhHHHHHHHHH
Confidence 9999999985321 122334454 578999999999999999999987544332 234689999999999
Q ss_pred HHHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhc
Q psy16062 160 CSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSK 214 (396)
Q Consensus 160 ~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~ 214 (396)
.+++.+++||+++||||+|||+++.+.|+++|+||++|++|+++++++|++++.+
T Consensus 201 ~~~~~g~~SGa~lNPARt~gpal~~~~~~~~wvY~vap~lGA~lgally~~l~~~ 255 (283)
T PLN00182 201 NVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIRFT 255 (283)
T ss_pred HHHHccccCccccChHHHHHHHHHhccccceeHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999998899999999999999999999999998754
No 8
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=1.6e-41 Score=322.58 Aligned_cols=203 Identities=32% Similarity=0.441 Sum_probs=172.3
Q ss_pred EEEEeecceeccccC-CCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHH
Q psy16062 2 LMFFGCMSLVQGFSQ-TPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIG 80 (396)
Q Consensus 2 lv~~g~g~~~~~~~~-~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g 80 (396)
|+|+|++++...... ...+++.++++||+++++.+++++++||||+|||||++.++.|+++|++.+.|+++|++||++|
T Consensus 84 Lvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~~~~~~YiiaQilGAi~a 163 (298)
T PLN00026 84 LIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWKHVPAYIAAQVSASICA 163 (298)
T ss_pred HHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 567777754432211 1236778899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHHHH
Q psy16062 81 VGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALC 160 (396)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v~~~ 160 (396)
+++++.++++... . +.+.| +.+.+++++.|+++|++|+++++.+.+++++ .....++.+|+++...
T Consensus 164 a~~~~~~~~~~~~---------~--g~t~p--~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~-~~~~~~l~iGl~V~~~ 229 (298)
T PLN00026 164 SFALKGVFHPFMS---------G--GVTVP--SVSTGQAFALEFIITFNLLFVVTAVATDTRA-VGELAGIAVGATVMLN 229 (298)
T ss_pred HHHHHHHhccccc---------C--ceeee--cccHHHHHHHHHHHHHHHHHhheeeecCCCC-cCCccchHHHHHHHHH
Confidence 9999999875321 1 22444 4689999999999999999999977543332 2346889999999999
Q ss_pred HHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcCCCC
Q psy16062 161 SITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDG 218 (396)
Q Consensus 161 ~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~ 218 (396)
++..+++||++|||||||+|+++.++|+++|+||++|++|+++++++|+++..++.++
T Consensus 230 ~l~~g~~TGa~mNPARtlgPal~~~~~~~~wVy~vaPilGAilga~ly~~~~~~~~~~ 287 (298)
T PLN00026 230 ILVAGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREEDG 287 (298)
T ss_pred HHHhcccCccccChHHHHHHHHhcCCchheeHHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 9999999999999999999999999999999999999999999999999986665433
No 9
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=8.5e-42 Score=317.72 Aligned_cols=199 Identities=36% Similarity=0.679 Sum_probs=172.1
Q ss_pred EEEEeecceeccccCC-------CCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHh
Q psy16062 2 LMFFGCMSLVQGFSQT-------PIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQV 74 (396)
Q Consensus 2 lv~~g~g~~~~~~~~~-------~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~ 74 (396)
|+|+|+++.+...... ..++..++++||+++++.+++++++||||+||+||+++++.|++++++++.|+++|+
T Consensus 21 lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~ 100 (227)
T PF00230_consen 21 LVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFALTGRISWKKAIVYIIAQF 100 (227)
T ss_dssp HHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHTTSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheeeeeeecccceeeEEeecc
Confidence 4566777555322111 125778999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCC-CCchhHHH
Q psy16062 75 LGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKF-GDSVAIKF 153 (396)
Q Consensus 75 lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~-~~~~~~~i 153 (396)
+|+++|+.+++.++++... ......+.|.++.+..++++.|+++|++|+++++...|++++.. ++..|+.+
T Consensus 101 lGa~~g~~l~~~~~~~~~~--------~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~~~~~~~p~~i 172 (227)
T PF00230_consen 101 LGAFLGALLVYALYPDSNS--------AAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKRKFPLGPLAPLAI 172 (227)
T ss_dssp HHHHHHHHHHHHHSTHHHT--------CTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSSTSSGGHHHHH
T ss_pred ccccccccchhhcccCccc--------ccccccccccccchhhhhhhhhhhhhhHHHhhhhhhcccccccccccccceeE
Confidence 9999999999999987521 12334556777889999999999999999999999998888765 34789999
Q ss_pred HHHHHHHHHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHH
Q psy16062 154 ALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLY 208 (396)
Q Consensus 154 g~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~ 208 (396)
|+.+....+..+++||++|||||||+|+++.+.|+++|+||++|++|+++++++|
T Consensus 173 g~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 173 GLTVGALVLAGGPYTGASLNPARALGPALFSGIWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp HHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEeecccccccccccccCchhhcCceeecccCCeEEEEEehHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999987
No 10
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=8.4e-41 Score=312.81 Aligned_cols=202 Identities=28% Similarity=0.483 Sum_probs=171.2
Q ss_pred EEEEeecceecc-c-c--C--CCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhh
Q psy16062 2 LMFFGCMSLVQG-F-S--Q--TPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVL 75 (396)
Q Consensus 2 lv~~g~g~~~~~-~-~--~--~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~l 75 (396)
|+|+++|++... . . + ...+++.++++||+++++.+++++++||+|+|||+|++.++.|++++.+.+.|+++|++
T Consensus 31 lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g~~~~~~~~~y~~aq~l 110 (250)
T PLN00166 31 FVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITIITGFFYWIAQCL 110 (250)
T ss_pred HHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 567778876542 1 1 1 12367789999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCC-CCCchhHHHH
Q psy16062 76 GCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAK-FGDSVAIKFA 154 (396)
Q Consensus 76 Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~-~~~~~~~~ig 154 (396)
|+++|+.+.+.+++++.. .. ....++.+..++++.|+++|++|+++++...+++++. .....|+.+|
T Consensus 111 Ga~~~a~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~~~~~p~~iG 178 (250)
T PLN00166 111 GSIVACLLLVFVTNGESV-------PT-----HGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIG 178 (250)
T ss_pred HHHHHHHHHHHhccCCCC-------cc-----cccCCCCcHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHH
Confidence 999999999988754211 00 1122356889999999999999999999876544432 3358999999
Q ss_pred HHHHHHHHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcC
Q psy16062 155 LVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKD 215 (396)
Q Consensus 155 ~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~ 215 (396)
+.+...++..+++||++||||||||||+++++|+++|+||++|++|+++++++|+.++.+.
T Consensus 179 l~v~~~~~~~~~~tG~~~NPAR~~gPal~~~~~~~~wvywvgPi~Ga~~aa~~y~~l~~~~ 239 (250)
T PLN00166 179 FIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIGS 239 (250)
T ss_pred HHHHHHHHcccCCCCCccCchHhhHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999999999887544
No 11
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=1.2e-40 Score=312.93 Aligned_cols=202 Identities=29% Similarity=0.488 Sum_probs=171.9
Q ss_pred EEEEeecceeccc----c-C-CCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhh
Q psy16062 2 LMFFGCMSLVQGF----S-Q-TPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVL 75 (396)
Q Consensus 2 lv~~g~g~~~~~~----~-~-~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~l 75 (396)
|+|+|||+++... . . .+.+++.++++||+++++.+++++++||+|+|||+|++.++.|++++++.+.|+++|++
T Consensus 33 lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~~~~~~~~~yi~aQ~l 112 (252)
T PLN00027 33 FVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLL 112 (252)
T ss_pred HHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 5677888764321 1 1 12367789999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhc-cCCCCCCCCchhHHHH
Q psy16062 76 GCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVW-DSRNAKFGDSVAIKFA 154 (396)
Q Consensus 76 Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~-~~~~~~~~~~~~~~ig 154 (396)
||++|+.+.+.+.++... ....+. ++.+.+++++.|+++||+|+++++... |+|+....+..|+.+|
T Consensus 113 Ga~~ga~~~~~~~~~~~~----------~~~~~~--~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~~p~~iG 180 (252)
T PLN00027 113 GSVVACLLLKFSTGGLET----------SAFSLS--SGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDLGIIAPIAIG 180 (252)
T ss_pred HHHHHHHHHHHhcCCccc----------ccccCC--CCccHHHHHHHHHHHHHHHHHHHHHhccccccCCccchHHHHHH
Confidence 999999999887654211 112223 357899999999999999999999874 5554333458999999
Q ss_pred HHHHHHHHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcC
Q psy16062 155 LVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKD 215 (396)
Q Consensus 155 ~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~ 215 (396)
+.+...++..+++||++||||||||||+++++|+++|+||+||++|+++++++|++++.++
T Consensus 181 l~v~~~~~~~g~~TG~~~NPAR~~gPal~~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 241 (252)
T PLN00027 181 FIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIGS 241 (252)
T ss_pred HHHHHHHHhcccccccccCcchhHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999998653
No 12
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=9.7e-41 Score=313.16 Aligned_cols=202 Identities=26% Similarity=0.391 Sum_probs=173.5
Q ss_pred EEEEeecceeccc----c--CCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhh
Q psy16062 2 LMFFGCMSLVQGF----S--QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVL 75 (396)
Q Consensus 2 lv~~g~g~~~~~~----~--~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~l 75 (396)
|+|+++|+++... + ..+.+++.++++||+++++.+++++++||+|+|||||++.++.|+++|++.+.|+++|++
T Consensus 35 lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~g~~~~~~~~~yi~aQ~l 114 (256)
T PLN00167 35 FVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGGHISVPTAMFYWISQML 114 (256)
T ss_pred HHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHhCCCcHhhhhHHHHHHHH
Confidence 5677888876431 1 112368899999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHH
Q psy16062 76 GCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFAL 155 (396)
Q Consensus 76 Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~ 155 (396)
|+++|+++.+.++++... ......++.+.+++++.|+++|++|+++++..+|+++....+..|+.+|+
T Consensus 115 Ga~~ga~~~~~~~~~~~~------------~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~~~~~~pl~iGl 182 (256)
T PLN00167 115 ASVMACLFLKVTTVGQHV------------PTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGLLGAIGPLAIGL 182 (256)
T ss_pred HHHHHHHHHHHhhccccc------------cccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCcchHHHHH
Confidence 999999999988764321 00111234577899999999999999999999887765444578999999
Q ss_pred HHHHHHHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcC
Q psy16062 156 VIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKD 215 (396)
Q Consensus 156 ~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~ 215 (396)
.+....+..+++||++|||||||||+++.+.|+++|+||+||++|+++++++|++++.|+
T Consensus 183 ~v~~~~~~~g~~TG~a~NPAR~~gPal~~~~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~ 242 (256)
T PLN00167 183 VAGANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVFPT 242 (256)
T ss_pred HHHHHHHhccCCCCcccCcccchHHHHhccCccCcEEEeHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999999998644
No 13
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=3.2e-39 Score=300.27 Aligned_cols=210 Identities=32% Similarity=0.622 Sum_probs=180.3
Q ss_pred EEEEeecceeccccCC--CCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHH
Q psy16062 2 LMFFGCMSLVQGFSQT--PIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLI 79 (396)
Q Consensus 2 lv~~g~g~~~~~~~~~--~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~ 79 (396)
|+++|+|+.++....+ +.+++.++++||+++.+.+++++++||+|+|||+|++.++.|+++|++.+.|+++|++|+++
T Consensus 13 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~~y~~aq~~Ga~~ 92 (228)
T cd00333 13 LVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVIPYIIAQLLGAIL 92 (228)
T ss_pred HHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 5677888876644222 23567899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCC-CCCCchhHHHHHHHH
Q psy16062 80 GVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNA-KFGDSVAIKFALVIA 158 (396)
Q Consensus 80 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~-~~~~~~~~~ig~~v~ 158 (396)
|+.+.+.+++++..+.+...+...+.+.+.|.++.+..++++.|+++|+++++.++...|++++ ......|+.+|+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~~~~~~~~~iGl~v~ 172 (228)
T cd00333 93 GAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPPPGGLAPLAIGLLVA 172 (228)
T ss_pred HHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccCCCCCcHHHHHHHHHH
Confidence 9999999998866533222222223455778888899999999999999999999999887664 233478999999999
Q ss_pred HHHHhccCCccCccchhhhhHHHHhhcc---ccccchhhhhhHHHHHHHHHHHHHH
Q psy16062 159 LCSITVGPYTGASMNPARSLAPAIYSNV---WTAHWIYWVAPILGSIVSTLLYKYV 211 (396)
Q Consensus 159 ~~~~~~~~~tG~~lNPAr~lg~~~~~~~---~~~~wvy~v~p~~Ga~la~~l~~~~ 211 (396)
...+..+++||+++|||||++|++.++. |+++|+||++|++|+++++++|+++
T Consensus 173 ~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 173 AIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred HHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999875 9999999999999999999999863
No 14
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=9.3e-38 Score=294.91 Aligned_cols=200 Identities=28% Similarity=0.465 Sum_probs=171.2
Q ss_pred EEEEeecceeccccC-CCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHH
Q psy16062 2 LMFFGCMSLVQGFSQ-TPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIG 80 (396)
Q Consensus 2 lv~~g~g~~~~~~~~-~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g 80 (396)
|+|++|+++...... ...+++.++++||+++++.+++++++||||+|||+|++.++.|+++|++.++|+++|++|+++|
T Consensus 58 lvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~i~~~~~~~Yi~aQ~lGa~~g 137 (274)
T PLN00183 58 LMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGHFPWSKVPLYITAQTVGSVLA 137 (274)
T ss_pred HHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 566777776543221 1236677899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHHHH
Q psy16062 81 VGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALC 160 (396)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v~~~ 160 (396)
+.+++.+++... ....+.|. .+.+++++.|+++|+++++.++...+++++ .....++.+|+.+...
T Consensus 138 a~l~~~~~~~~~-----------~~~~~~p~--~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~-~~~~~~l~iGl~v~~~ 203 (274)
T PLN00183 138 TYVGVSVYGVKA-----------DLMTTKPA--QGCSSAFWVEFIATFIVMFLAASLTSQPQS-LGHLSGFVIGIAIGLA 203 (274)
T ss_pred HHHHHHHhcCCc-----------ccccCCCc--ccHHHHHHHHHHHHHHHHHhhheeeccccC-CCCceehHHHHHHHHH
Confidence 999999887421 12333443 467899999999999999999988776532 2236789999999999
Q ss_pred HHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcC
Q psy16062 161 SITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKD 215 (396)
Q Consensus 161 ~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~ 215 (396)
+++.+++||++|||||+|+|++.+.+|+++|+||++|++|+++++++|++++.+.
T Consensus 204 v~~~g~~TG~~~NPArtlgpai~~~~~~~~wvy~vapilGailaa~l~~~l~~~~ 258 (274)
T PLN00183 204 VLITGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRT 258 (274)
T ss_pred HHhccCCCCCEeCHHHHHHHHHhCCChhheehHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999998999999999999999999999999997655
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=3.9e-37 Score=283.99 Aligned_cols=199 Identities=34% Similarity=0.617 Sum_probs=169.1
Q ss_pred EEEEeecceeccccC----C--CCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhh
Q psy16062 2 LMFFGCMSLVQGFSQ----T--PIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVL 75 (396)
Q Consensus 2 lv~~g~g~~~~~~~~----~--~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~l 75 (396)
|+++|+++++..... . +.++..++++||+++.+.+++++++||+|+|||+|++.++.|++++++.+.|+++|++
T Consensus 9 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~~y~~aQ~~ 88 (216)
T TIGR00861 9 LVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVPVYIVAQLI 88 (216)
T ss_pred HHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 566778776652211 1 1157789999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC-chhHHHH
Q psy16062 76 GCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGD-SVAIKFA 154 (396)
Q Consensus 76 Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~-~~~~~ig 154 (396)
|+++|+.+.+.++++..... .. ....+.++.+.+++++.|+++|++++++++...+++++...+ ..|+.+|
T Consensus 89 Ga~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~iG 160 (216)
T TIGR00861 89 GAILGAALLYGLTSGLFPGN-------LA-VNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRGGFAPLAIG 160 (216)
T ss_pred HHHHHHHHHHHHccccccCC-------cc-ccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCccHHHHHH
Confidence 99999999999988754210 00 122234457899999999999999999999988876654333 7999999
Q ss_pred HHHHHHHHhccCCccCccchhhhhHHHHhhc--cccccchhhhhhHHHHHHHHHHH
Q psy16062 155 LVIALCSITVGPYTGASMNPARSLAPAIYSN--VWTAHWIYWVAPILGSIVSTLLY 208 (396)
Q Consensus 155 ~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~--~~~~~wvy~v~p~~Ga~la~~l~ 208 (396)
+.+...++..+++||+++||||+|+|++.++ +|+++|+||++|++|+++++++|
T Consensus 161 ~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 161 LLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999987 89999999999999999999875
No 16
>KOG0224|consensus
Probab=100.00 E-value=2.1e-34 Score=266.27 Aligned_cols=156 Identities=29% Similarity=0.392 Sum_probs=140.3
Q ss_pred CccchhhHHHHHhhhhhHHHHHHHHHHhhhhhccccC--CCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHH
Q psy16062 241 RFGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQ--TPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFL 318 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~Ef~gT~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~ 318 (396)
.+.+.++++.|++++||+||++|+++++++++|.... +..+...+.++||+++++.+++.|.+||||+|||||+++++
T Consensus 23 ~~~~i~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~ 102 (316)
T KOG0224|consen 23 AKLHIRNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCI 102 (316)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHH
Confidence 3445678999999999999999999999999887544 34456778999999999999999999999999999999999
Q ss_pred hcccchhhHHHHHHHHhHHHHHHHHhhhhhCcccccccCC------CCCccceEEecCCCCCCChHHHHHHHHHHHHHHh
Q psy16062 319 LEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVG------SAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLV 392 (396)
Q Consensus 319 ~~~~~~~~~~~yi~aQ~~Ga~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~ 392 (396)
.||+||+|+++|+++|++||++|++.+|.+|++.+.+..+ +.+.++++++|+|.+++|.+++|+.|+++|.+|+
T Consensus 103 ~g~~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~ 182 (316)
T KOG0224|consen 103 LGRLPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLV 182 (316)
T ss_pred hcCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998876443 3445788999999999999999999999999999
Q ss_pred HhhC
Q psy16062 393 FTCC 396 (396)
Q Consensus 393 ~~v~ 396 (396)
.++|
T Consensus 183 ~~l~ 186 (316)
T KOG0224|consen 183 LCLF 186 (316)
T ss_pred hhee
Confidence 9876
No 17
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=1.8e-32 Score=260.72 Aligned_cols=219 Identities=20% Similarity=0.268 Sum_probs=175.2
Q ss_pred eEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCCCC--chhHHHHHHHHHHHHhccCCccCccchhhhhHH
Q psy16062 105 FCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWD--SRNAKFGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAP 180 (396)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~--~~~~~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~ 180 (396)
...+.|.++.+.+|.++.|+++||+|+++++.... ++.....+ ..++.+|+++.+.+++.+++||+++||||++++
T Consensus 59 ~~~~~~~~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~ 138 (298)
T PLN00026 59 CFCDLPPPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAF 138 (298)
T ss_pred ccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHH
Confidence 44456777788999999999999999999986432 22111112 345799999999999999999999999999999
Q ss_pred HHhhc-cccccchhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCCccchhhHHHHHhhhhhHH
Q psy16062 181 AIYSN-VWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLG 259 (396)
Q Consensus 181 ~~~~~-~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~~~~~~~~Ef~g 259 (396)
++..+ .|..+|+||++|++|+++|+++++.++.+... ..+ +.+ ..+.++.++.||++
T Consensus 139 al~g~~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~----------~g~--t~p----------~~s~~~a~~~Efi~ 196 (298)
T PLN00026 139 AALRHFPWKHVPAYIAAQVSASICASFALKGVFHPFMS----------GGV--TVP----------SVSTGQAFALEFII 196 (298)
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----------Cce--eee----------cccHHHHHHHHHHH
Confidence 99765 79999999999999999999999988865321 011 111 12467889999999
Q ss_pred HHHHHHHHhhhhhccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcccchhhHHHHHHHHhHHHH
Q psy16062 260 TSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCL 339 (396)
Q Consensus 260 T~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~~~~~~~~yi~aQ~~Ga~ 339 (396)
|++|++++++.. .. .++ .+. ..++.+|+.++..+++.++.||+|+|||+|++.++.++ +|.+.|+|+++|++|++
T Consensus 197 TfiLv~vi~~v~-~~-~~~-~~~-~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~-~~~~~wVy~vaPilGAi 271 (298)
T PLN00026 197 TFNLLFVVTAVA-TD-TRA-VGE-LAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG-NYRAIWIYLVAPTLGAL 271 (298)
T ss_pred HHHHHHhheeee-cC-CCC-cCC-ccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC-CchheeHHHHHHHHHHH
Confidence 999999988542 11 111 111 24788999999999999999999999999999999986 89999999999999999
Q ss_pred HHHHhhhhhCc
Q psy16062 340 IGVGLVNIITP 350 (396)
Q Consensus 340 ~~~~~~~~~~~ 350 (396)
+|+++.+.+.-
T Consensus 272 lga~ly~~~~~ 282 (298)
T PLN00026 272 AGAGTYTAVKL 282 (298)
T ss_pred HHHHHHHHHhC
Confidence 99999877643
No 18
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.98 E-value=1.2e-31 Score=253.48 Aligned_cols=214 Identities=21% Similarity=0.383 Sum_probs=173.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCC--CCc--hhHHHHHHHHHHHHhccCCccCccchhhhhHHHHhhc-cc
Q psy16062 113 SLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKF--GDS--VAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VW 187 (396)
Q Consensus 113 ~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~--~~~--~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~-~~ 187 (396)
+.+.++.++.|+++||+++++.+...+.++... .+. .++.+|+.+.+.+++.+++||+++||||++++++..+ .|
T Consensus 41 ~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~i~~ 120 (274)
T PLN00183 41 DLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGHFPW 120 (274)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcCCCH
Confidence 567889999999999999999998765433211 122 5678999999999999999999999999999999866 79
Q ss_pred cccchhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCCccchhhHHHHHhhhhhHHHHHHHHHH
Q psy16062 188 TAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFG 267 (396)
Q Consensus 188 ~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~~~~~~~~Ef~gT~~l~~~~ 267 (396)
..+|+||++|++|+++++++++.++..... ...+.+. ...++.+++|+++|+++++.+
T Consensus 121 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~------------~~~~~p~----------~~~~~~~~~E~v~T~iLv~~i 178 (274)
T PLN00183 121 SKVPLYITAQTVGSVLATYVGVSVYGVKAD------------LMTTKPA----------QGCSSAFWVEFIATFIVMFLA 178 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcc------------cccCCCc----------ccHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999888764210 1111110 124678999999999999999
Q ss_pred hhhhhccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcccchhhHHHHHHHHhHHHHHHHHhhhh
Q psy16062 268 CMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNI 347 (396)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~~~~~~~~yi~aQ~~Ga~~~~~~~~~ 347 (396)
++..... + +.+. ..++.+|+.+.+.+++.+++||+|+|||+|++.++.+ .+|.+.++|+++|++|+++|+++.+.
T Consensus 179 ~~~~~~~--~-~~~~-~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~~~~~~wvy~vapilGailaa~l~~~ 253 (274)
T PLN00183 179 ASLTSQP--Q-SLGH-LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-WDFKDIWIYITAPTIGAVAGALMFHL 253 (274)
T ss_pred heeeccc--c-CCCC-ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-CChhheehHHHHHHHHHHHHHHHHHH
Confidence 8754221 1 1112 2478899999999999999999999999999999997 58999999999999999999999998
Q ss_pred hCcccc
Q psy16062 348 ITPEEI 353 (396)
Q Consensus 348 ~~~~~~ 353 (396)
++.++.
T Consensus 254 l~~~~~ 259 (274)
T PLN00183 254 LRLRTQ 259 (274)
T ss_pred HhccCC
Confidence 875543
No 19
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.97 E-value=4.4e-31 Score=250.34 Aligned_cols=216 Identities=21% Similarity=0.344 Sum_probs=171.2
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCC--CCCC--chhHHHHHHHHHHHHhccCCccCccchhhhhHHHHh
Q psy16062 108 TVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNA--KFGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIY 183 (396)
Q Consensus 108 ~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~--~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~ 183 (396)
+.|+ ..+.+|.++.|+++||+|++..+......+. ...+ ..++.+|+.+...+++.+++||+++|||++++.++.
T Consensus 34 ~~p~-~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~ 112 (283)
T PLN00182 34 TSPS-IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIF 112 (283)
T ss_pred cCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHH
Confidence 3443 4567789999999999999999876532221 1112 345588999999999999999999999999999998
Q ss_pred hc-cccccchhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCCccchhhHHHHHhhhhhHHHHH
Q psy16062 184 SN-VWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSM 262 (396)
Q Consensus 184 ~~-~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~~~~~~~~Ef~gT~~ 262 (396)
.+ .|...|+||++|++|+++++++.+.++....+ ..+.+.+. ...++.+++|+++|++
T Consensus 113 ~~~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~-----------~~~~~~p~----------~s~~~a~~~E~l~Tfi 171 (283)
T PLN00182 113 RRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPE-----------AFFGTTPT----------DSSGQALVAEIIISFL 171 (283)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----------ceeeCCCC----------cchHHHHHHHHHHHHH
Confidence 77 79999999999999999999999888742110 11111111 1357889999999999
Q ss_pred HHHHHhhhhhccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcccchhhHHHHHHHHhHHHHHHH
Q psy16062 263 LMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGV 342 (396)
Q Consensus 263 l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~~~~~~~~yi~aQ~~Ga~~~~ 342 (396)
|++++++.... .+.. +. ..++.+|+.+.+.+++.+++||+|+|||+|++.++.++ .|++.|+|+++|++|+++|+
T Consensus 172 Lv~~i~~~~~~--~~~~-~~-~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~~~~~wvY~vap~lGA~lga 246 (283)
T PLN00182 172 LMFVISGVATD--SRAV-GE-LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-RYKGIWVYIVGPFVGIIAGG 246 (283)
T ss_pred HHHHHHhheec--cccC-Cc-chhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc-cccceeHHHHHHHHHHHHHH
Confidence 99999865322 1111 12 25889999999999999999999999999999999865 58899999999999999999
Q ss_pred HhhhhhCc
Q psy16062 343 GLVNIITP 350 (396)
Q Consensus 343 ~~~~~~~~ 350 (396)
++.+.+..
T Consensus 247 lly~~l~~ 254 (283)
T PLN00182 247 FVYNLIRF 254 (283)
T ss_pred HHHHHHhc
Confidence 99988763
No 20
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.97 E-value=7.8e-31 Score=243.94 Aligned_cols=219 Identities=23% Similarity=0.298 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCC-C--CCC--chhHHHHHHHHHHHHhccCCccCccchhhhhHHHHhhc-cccccc
Q psy16062 118 QAFLAEFFSTSLLVFTCCGVWDSRNA-K--FGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VWTAHW 191 (396)
Q Consensus 118 ~~~~~E~~~T~~lv~~il~~~~~~~~-~--~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~-~~~~~w 191 (396)
|.++.|+++|+++++..+....+++. . ..+ ..++.+|+.+...++..+++||+++|||+++++.+..+ +|...|
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~ 80 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHH
Confidence 34788999999999999987543221 1 112 56889999999999999999999999999999999765 689999
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCCccchhhHHHHHhhhhhHHHHHHHHHHhhhh
Q psy16062 192 IYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSL 271 (396)
Q Consensus 192 vy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~~~~~~~~Ef~gT~~l~~~~~~~~ 271 (396)
+||++|++|+++++.+++.++.++.++.++.++ -..+++.+.+.. ..+.+|.++.|++||++|++.+++..
T Consensus 81 ~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~E~v~T~~Lv~~i~~~~ 151 (228)
T cd00333 81 PYIIAQLLGAILGAALLYGLYYGLYLEFLGANN-IVAGIFGTYPSP--------GVSNGNAFFVEFIGTFILVLVVFATT 151 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccc-cccceeccCCCC--------CccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999888765443222211 011122221111 12467899999999999999999764
Q ss_pred hccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhccc--chhhHHHHHHHHhHHHHHHHHhhhh
Q psy16062 272 VQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMI--TMLELVLYVCSQVLGCLIGVGLVNI 347 (396)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~--~~~~~~~yi~aQ~~Ga~~~~~~~~~ 347 (396)
.. .+.+.+....++.+|+.+....++.+++||+|+|||+|+++++.++. +|++.++|+++|++|+++|+++.+.
T Consensus 152 ~~--~~~~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 152 DD--PNGPPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred cc--cccCCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHh
Confidence 21 11112233468899999999999999999999999999999999998 7999999999999999999988653
No 21
>PLN00184 aquaporin NIP1; Provisional
Probab=99.97 E-value=8.2e-30 Score=243.16 Aligned_cols=219 Identities=24% Similarity=0.285 Sum_probs=170.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhccCCCC--CCCCc--hhHHHHHHHHHHHHhccCCccCccchhhhhHHHHhhc-cc
Q psy16062 113 SLTTVQAFLAEFFSTSLLVFTCCGVWDSRNA--KFGDS--VAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VW 187 (396)
Q Consensus 113 ~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~--~~~~~--~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~-~~ 187 (396)
+.+.++.++.|+++||+|+++.+.....+.. ...+. .++.+|+++.+.+++.+++||+++||||+|++++..+ .|
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~ 129 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPL 129 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCH
Confidence 3467899999999999999999876532211 11133 4556699999999999999999999999999999766 79
Q ss_pred cccchhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCCccchhhHHHHHhhhhhHHHHHHHHHH
Q psy16062 188 TAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFG 267 (396)
Q Consensus 188 ~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~~~~~~~~Ef~gT~~l~~~~ 267 (396)
...|+||++|++|+++|+++++.++......... .......+.+. ...++.++.|+++|++|++..
T Consensus 130 ~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~----~~~~~~~t~p~----------~s~~~af~~E~i~TfvLv~~i 195 (296)
T PLN00184 130 KQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSG----KHDVFIGSSPV----------GSDLQAFVMEFIVTFYLMFII 195 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchhhcccc----ccceeeccCcC----------CcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888543211100 01001111110 146789999999999999999
Q ss_pred hhhhhccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcccchhhHHHHHHHHhHHHHHHHHhhhh
Q psy16062 268 CMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNI 347 (396)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~~~~~~~~yi~aQ~~Ga~~~~~~~~~ 347 (396)
++.... .+ +.+. ..++.+|+.+.....+.++.||+++|||++++.++... .|++.|+|+++|++|+++|+++.+.
T Consensus 196 l~~~~~--~~-~~~~-~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~-~~~~~WVy~vgPilGa~laal~y~~ 270 (296)
T PLN00184 196 SGVATD--NR-AIGE-LAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG-CYKGIWIYIVAPTLGAIAGAWVYNT 270 (296)
T ss_pred Hheecc--Cc-CCCc-chHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh-cccccchHHhHHHHHHHHHHHHHHH
Confidence 965321 11 1111 34789999999999999999999999999999999865 6789999999999999999999887
Q ss_pred hCc
Q psy16062 348 ITP 350 (396)
Q Consensus 348 ~~~ 350 (396)
+..
T Consensus 271 l~~ 273 (296)
T PLN00184 271 VRY 273 (296)
T ss_pred Hhc
Confidence 764
No 22
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.8e-30 Score=238.21 Aligned_cols=148 Identities=33% Similarity=0.421 Sum_probs=131.4
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhhhccc----cCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcccc
Q psy16062 248 KLLELCLGEVLGTSMLMFFGCMSLVQGF----SQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMIT 323 (396)
Q Consensus 248 ~~~~~~~~Ef~gT~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~~ 323 (396)
++.|++++||+||++|+++++|+.++.. +....+++.++++||+++++.+|+++++||+|+|||||+++++.|++|
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 4567889999999999999999876543 123445677899999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhHHHHHHHHhhhhhCcccccccCCCCCccceEEecCCCCCCChHHHHHHHHHHHHHHhHhhC
Q psy16062 324 MLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC 396 (396)
Q Consensus 324 ~~~~~~yi~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~~~v~ 396 (396)
|+|++.||++|++||++|+.++|.++++...+.+++.....+.++|.|..+ +..++++.|+++|++|+++|+
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~-~~~~~fl~E~v~T~~L~~~Il 154 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGY-SLGQAFLIEFVGTFVLVLGIL 154 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcc-cHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988876655556778888899865 999999999999999999874
No 23
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.96 E-value=6.9e-29 Score=229.03 Aligned_cols=204 Identities=24% Similarity=0.294 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHHHHhccC---CC--CCCC--C--chhHHHHHHHHHHHHhccCCccCccchhhhhHHHHhhc-cccccc
Q psy16062 122 AEFFSTSLLVFTCCGVWDS---RN--AKFG--D--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VWTAHW 191 (396)
Q Consensus 122 ~E~~~T~~lv~~il~~~~~---~~--~~~~--~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~-~~~~~w 191 (396)
.|+++|++++++.+..... ++ +... + ..++.+|+.+...+++.++.||+++|||+++++.+..+ +|...|
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 4999999999999876532 11 1111 2 47889999999999999999999999999999999876 799999
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCCccchhhHHHHHhhhhhHHHHHHHHHHhhhh
Q psy16062 192 IYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSL 271 (396)
Q Consensus 192 vy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~~~~~~~~Ef~gT~~l~~~~~~~~ 271 (396)
+||++|++|+++++++++.++.++.+.+.+... .. ....+.++.++.|+++|+++++..++..
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~----------~~-------~~~~~~~~~~~~E~i~T~~lv~~~~~~~ 143 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNG----------SG-------AAGVSSGQAFFVEFIGTAILVLVIFATT 143 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccC----------CC-------CCcccHHHHHHHHHHHHHHHHHHHheee
Confidence 999999999999999998887765321111000 00 0112568899999999999999999754
Q ss_pred hccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhc-ccchhhHHHHHHHHhHHHHHHHHh
Q psy16062 272 VQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLE-MITMLELVLYVCSQVLGCLIGVGL 344 (396)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~-~~~~~~~~~yi~aQ~~Ga~~~~~~ 344 (396)
.. .+........++.+|+.+...+++.+++||+|+|||+|++.++.+ ..+|++.++|+++|++|+++++.+
T Consensus 144 ~~--~~~~~~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 144 DP--RNRVPRGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred cC--CCCCCCCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHh
Confidence 22 111111224689999999999999999999999999999999987 478999999999999999999875
No 24
>PLN00166 aquaporin TIP2; Provisional
Probab=99.96 E-value=4.2e-28 Score=227.20 Aligned_cols=215 Identities=23% Similarity=0.344 Sum_probs=168.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhccCC---C--CC--CCC--chhHHHHHHHHHHHHhccCCccCccchhhhhHHHHhh
Q psy16062 114 LTTVQAFLAEFFSTSLLVFTCCGVWDSR---N--AK--FGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYS 184 (396)
Q Consensus 114 ~~~~~~~~~E~~~T~~lv~~il~~~~~~---~--~~--~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~ 184 (396)
.+.+|.++.|+++|++++++.+...++. . +. ..+ ..++.+|+.+.+.+++++++||+++||||++++.+..
T Consensus 15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g 94 (250)
T PLN00166 15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG 94 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC
Confidence 4678899999999999999999875431 1 11 112 3677899999999999999999999999999999964
Q ss_pred c-cccccchhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCCccchhhHHHHHhhhhhHHHHHH
Q psy16062 185 N-VWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSML 263 (396)
Q Consensus 185 ~-~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~~~~~~~~Ef~gT~~l 263 (396)
+ .|...|+||++|++|+++++.+++.++..+. .+ ...... ..+..+.++.|+++|++|
T Consensus 95 ~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~----~~----~~~~~~-------------~~~~~~~~~~E~v~Tf~L 153 (250)
T PLN00166 95 NITIITGFFYWIAQCLGSIVACLLLVFVTNGES----VP----THGVAA-------------GLGAIEGVVMEIVVTFAL 153 (250)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCC----Cc----ccccCC-------------CCcHHHHHHHHHHHHHHH
Confidence 4 6888999999999999999999988863211 00 001100 124578999999999999
Q ss_pred HHHHhhhhhccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcccchhhHHHHHHHHhHHHHHHHH
Q psy16062 264 MFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVG 343 (396)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~~~~~~~~yi~aQ~~Ga~~~~~ 343 (396)
++..++.... .++.......++.+|+.+.......++.||+.+|||++++.++... .|.+.|+||++|++|++++++
T Consensus 154 v~~i~~~~~~--~~~~~~~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~-~~~~~wvywvgPi~Ga~~aa~ 230 (250)
T PLN00166 154 VYTVYATAAD--PKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG-DFSQIWIYWVGPLVGGALAGL 230 (250)
T ss_pred HHHHHHhccc--ccccccccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC-CCcccchhhHHHHHHHHHHHH
Confidence 9999865321 1111111234788999999999999999999999999999999876 588999999999999999999
Q ss_pred hhhhhCccc
Q psy16062 344 LVNIITPEE 352 (396)
Q Consensus 344 ~~~~~~~~~ 352 (396)
+.+.++.+.
T Consensus 231 ~y~~l~~~~ 239 (250)
T PLN00166 231 IYGDVFIGS 239 (250)
T ss_pred HHHHHhccc
Confidence 987775443
No 25
>KOG0223|consensus
Probab=99.95 E-value=5.7e-28 Score=222.47 Aligned_cols=144 Identities=32% Similarity=0.513 Sum_probs=126.1
Q ss_pred hhhHHHHHhhhhhHHHHHHHHHHhhhhhcccc-CCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcccc
Q psy16062 245 RAVKLLELCLGEVLGTSMLMFFGCMSLVQGFS-QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMIT 323 (396)
Q Consensus 245 ~~~~~~~~~~~Ef~gT~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~~ 323 (396)
++.+.+|++++||+||++|+|+++++...... ..+.+.+.+++.+|++++..++++|++||||+|||||+++++.|+++
T Consensus 6 ~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~is 85 (238)
T KOG0223|consen 6 LSVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKIS 85 (238)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCCc
Confidence 45678999999999999999999998766542 34445678899999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhHHHHHHHHhhhhhCcccccccCCCCCccceEEecCCCCCCChHHHHHHHHHHHHHHhHhhC
Q psy16062 324 MLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC 396 (396)
Q Consensus 324 ~~~~~~yi~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~~~v~ 396 (396)
+.+.+.|+.+|++|+++|+..++.+.+++.. .++.+.+.++++.+.+|+++.|++.||.|+++||
T Consensus 86 l~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~ 150 (238)
T KOG0223|consen 86 LFRAVAYIVAQLLGAIAGAALLKVVTPGQYN--------RKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVF 150 (238)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHheecCcccc--------cCCcceeccCCCCCcchhHHHHHHHHHHHhheeE
Confidence 9999999999999999999999999887521 1223456677788999999999999999999986
No 26
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.95 E-value=3.3e-27 Score=225.98 Aligned_cols=226 Identities=20% Similarity=0.271 Sum_probs=170.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhccCCCC-C-CCC--chhHHHHHHHHHHHHhccCCccCccchhhhhHHHHhhc-ccc
Q psy16062 114 LTTVQAFLAEFFSTSLLVFTCCGVWDSRNA-K-FGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VWT 188 (396)
Q Consensus 114 ~~~~~~~~~E~~~T~~lv~~il~~~~~~~~-~-~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~-~~~ 188 (396)
.+..+.++.|+++|++++++.+........ . ..+ ..++.+|+.+...+++.+++||+++|||+++++.+..+ .|.
T Consensus 47 ~~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~ 126 (294)
T PTZ00016 47 RPNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWK 126 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHH
Confidence 456789999999999999998877543221 1 112 46778899999999999999999999999999999877 799
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCC------CCCCCccccccCCCCCCCccchhhHHHHHhhhhhHHHHH
Q psy16062 189 AHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPE------QLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSM 262 (396)
Q Consensus 189 ~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~------~~~~~~~~~tl~~~~~~~~~~~~~~~~~~~~~Ef~gT~~ 262 (396)
..|.||++|++|+++|+.+-+.++.+..+..++.. ..+...++.+.+ ..+..+.++.|+++|++
T Consensus 127 ~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p----------~~s~~~a~~~E~i~T~i 196 (294)
T PTZ00016 127 KLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYP----------REGNFYAIFSELILTAI 196 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCC----------CccHHHHHHHHHHHHHH
Confidence 99999999999999999998888765432211100 001112222221 12467899999999999
Q ss_pred HHHHHhhhhhccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhc-----ccchh----hHHHHHHH
Q psy16062 263 LMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLE-----MITML----ELVLYVCS 333 (396)
Q Consensus 263 l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~-----~~~~~----~~~~yi~a 333 (396)
|++..++.. ...+ +...-..++.+|+.+.....+.++.||+.+|||++++.++.. +..|. +.|+|+++
T Consensus 197 Lv~~ila~~--d~~~-~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vg 273 (294)
T PTZ00016 197 LLLVILAIT--DPNN-CPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVA 273 (294)
T ss_pred HHHHHHHhc--cCcc-CCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehH
Confidence 999988643 1111 111112477899999999999999999999999999999985 22343 57999999
Q ss_pred HhHHHHHHHHhhhhhCccc
Q psy16062 334 QVLGCLIGVGLVNIITPEE 352 (396)
Q Consensus 334 Q~~Ga~~~~~~~~~~~~~~ 352 (396)
|++|+++|+++.+.+..++
T Consensus 274 P~vGa~~aally~~ll~~~ 292 (294)
T PTZ00016 274 PFVGAVLGMFLYDKFIPPL 292 (294)
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 9999999999988776544
No 27
>PLN00027 aquaporin TIP; Provisional
Probab=99.95 E-value=1.2e-26 Score=218.16 Aligned_cols=212 Identities=23% Similarity=0.311 Sum_probs=165.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhc---cC---CCCC-CCC--chhHHHHHHHHHHHHhccCCccCccchhhhhHHHHhhc
Q psy16062 115 TTVQAFLAEFFSTSLLVFTCCGVW---DS---RNAK-FGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN 185 (396)
Q Consensus 115 ~~~~~~~~E~~~T~~lv~~il~~~---~~---~~~~-~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~ 185 (396)
..+|.++.|+++|++|+++.+... +. +++. ..+ ..++.+|+.+.+.+++.++.||+++||||++++.+..+
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~ 97 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGN 97 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCC
Confidence 467889999999999999988663 11 1111 112 47899999999999999999999999999999997544
Q ss_pred -cccccchhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCCccchhhHHHHHhhhhhHHHHHHH
Q psy16062 186 -VWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLM 264 (396)
Q Consensus 186 -~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~~~~~~~~Ef~gT~~l~ 264 (396)
.|...|+||++|++|+++++++++.+..... .+.+.+.+ ....++.++.|+++||+++
T Consensus 98 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~-----------~~~~~~~~----------~~~~~~~~~~E~i~Tf~Lv 156 (252)
T PLN00027 98 ITLLRGILYWIAQLLGSVVACLLLKFSTGGLE-----------TSAFSLSS----------GVGVWNAFVFEIVMTFGLV 156 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-----------cccccCCC----------CccHHHHHHHHHHHHHHHH
Confidence 5888999999999999999999987643210 01111111 1246789999999999999
Q ss_pred HHHhhhhhccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcccchhhHHHHHHHHhHHHHHHHHh
Q psy16062 265 FFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGL 344 (396)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~~~~~~~~yi~aQ~~Ga~~~~~~ 344 (396)
+..++.... .++.+. ....++.+|+.+.....+.++.||+.+|||++++.++... .|.+.|+|+++|++|+++++++
T Consensus 157 ~~i~~~~~~-~~~~~~-~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~-~~~~~wvy~vgP~~Ga~laa~~ 233 (252)
T PLN00027 157 YTVYATAVD-PKKGDL-GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWTNHWVYWAGPLIGGGIAGLV 233 (252)
T ss_pred HHHHHhccc-cccCCc-cchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh-cchhhhHHHHHHHHHHHHHHHH
Confidence 998864321 111111 1235788999999999999999999999999999999985 6889999999999999999999
Q ss_pred hhhhCc
Q psy16062 345 VNIITP 350 (396)
Q Consensus 345 ~~~~~~ 350 (396)
.+.++.
T Consensus 234 y~~l~~ 239 (252)
T PLN00027 234 YELIFI 239 (252)
T ss_pred HHHHhc
Confidence 888764
No 28
>PLN00167 aquaporin TIP5; Provisional
Probab=99.95 E-value=4e-27 Score=221.15 Aligned_cols=217 Identities=19% Similarity=0.236 Sum_probs=169.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhccCCC---CC----CCC--chhHHHHHHHHHHHHhccCCccCccchhhhhHHHHh
Q psy16062 113 SLTTVQAFLAEFFSTSLLVFTCCGVWDSRN---AK----FGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIY 183 (396)
Q Consensus 113 ~~~~~~~~~~E~~~T~~lv~~il~~~~~~~---~~----~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~ 183 (396)
..+.++.++.|+++|+++++..+...+.++ ++ ..+ ..++.+|+.+.+.+++.+++||+++|||+++++.+.
T Consensus 18 ~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~ 97 (256)
T PLN00167 18 TRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVG 97 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHh
Confidence 346788999999999999999988765321 11 111 588999999999999999999999999999999997
Q ss_pred hc-cccccchhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCCccchhhHHHHHhhhhhHHHHH
Q psy16062 184 SN-VWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSM 262 (396)
Q Consensus 184 ~~-~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~~~~~~~~Ef~gT~~ 262 (396)
.+ .|...|+||++|++|+++++.+++.++...... .. ... .....++.++.|+++|++
T Consensus 98 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~---~~-----~~~-------------~~~s~~~~~~~E~i~T~~ 156 (256)
T PLN00167 98 GHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVP---TY-----KIA-------------EEMTGFGASVLEGVLTFG 156 (256)
T ss_pred CCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcccccc---cc-----ccC-------------cccchHHHHHHHHHHHHH
Confidence 55 688999999999999999999988775432110 00 000 011346788999999999
Q ss_pred HHHHHhhhhhccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcccchhhHHHHHHHHhHHHHHHH
Q psy16062 263 LMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGV 342 (396)
Q Consensus 263 l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~~~~~~~~yi~aQ~~Ga~~~~ 342 (396)
+++..+... ...+.. .....++.+|+.+....+..++.||+.+|||++++.++... +|.+.+.||++|++|+++++
T Consensus 157 L~~~i~~~~--~~~~~~-~~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~-~~~~~wvywvgP~~Ga~l~a 232 (256)
T PLN00167 157 LVYTVYAAG--DPRRGL-LGAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG-SFKNQAVYWVGPLLGGAVAG 232 (256)
T ss_pred HHHHHHHhc--cccccC-CCCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc-CccCcEEEeHHHHHHHHHHH
Confidence 999987532 111111 11234788999999999999999999999999999999875 57788999999999999999
Q ss_pred HhhhhhCccccc
Q psy16062 343 GLVNIITPEEIL 354 (396)
Q Consensus 343 ~~~~~~~~~~~~ 354 (396)
++.+.++.++.+
T Consensus 233 ~~y~~l~~~~~~ 244 (256)
T PLN00167 233 LLYDNVVFPTQD 244 (256)
T ss_pred HHHHHHhCCCcC
Confidence 998887765443
No 29
>PRK05420 aquaporin Z; Provisional
Probab=99.95 E-value=9.9e-27 Score=215.92 Aligned_cols=221 Identities=20% Similarity=0.240 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccC--CCCC-CCC--chhHHHHHHHHHHHHhccCCccCccchhhhhHHHHhhc-ccccc
Q psy16062 117 VQAFLAEFFSTSLLVFTCCGVWDS--RNAK-FGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VWTAH 190 (396)
Q Consensus 117 ~~~~~~E~~~T~~lv~~il~~~~~--~~~~-~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~-~~~~~ 190 (396)
.|.++.|+++|+++++........ +.+. ..+ ..++.+|+.+.+.+++.+++||+++|||+++++.+..+ +|...
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 578999999999999987765321 1111 112 24789999999999999999999999999999999754 79999
Q ss_pred chhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCCccchhhHHHHHhhhhhHHHHHHHHHHhhh
Q psy16062 191 WIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMS 270 (396)
Q Consensus 191 wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~~~~~~~~Ef~gT~~l~~~~~~~ 270 (396)
|+||++|++|+++++.+.+.++.++.+.+.....-...+...+ . + ...+..+.++.|+++|++|++..++.
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~----~~~~~~~~~~~E~v~T~iLv~~i~~~ 152 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEH---S--P----GGYSLLAALVCEVVLTAFFLLVILGA 152 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccC---C--C----CcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997777666443211110000000000000 0 0 11246789999999999999998864
Q ss_pred hhccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcc-cchhhHHHHHHHHhHHHHHHHHhhhhhC
Q psy16062 271 LVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEM-ITMLELVLYVCSQVLGCLIGVGLVNIIT 349 (396)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~-~~~~~~~~yi~aQ~~Ga~~~~~~~~~~~ 349 (396)
.- ++++. -..++.+|+.+.....+.++.||+.+|||++++.++... .++.+.|+|+++|++|+++++++.+.++
T Consensus 153 ~~---~~~~~--~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~ 227 (231)
T PRK05420 153 TD---KRAPA--GFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLL 227 (231)
T ss_pred hC---CCCCC--cchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHh
Confidence 31 11111 135788999999999999999999999999999999853 3456789999999999999999988775
Q ss_pred cc
Q psy16062 350 PE 351 (396)
Q Consensus 350 ~~ 351 (396)
.+
T Consensus 228 ~~ 229 (231)
T PRK05420 228 EK 229 (231)
T ss_pred cc
Confidence 44
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.94 E-value=5.1e-27 Score=218.37 Aligned_cols=145 Identities=32% Similarity=0.520 Sum_probs=120.2
Q ss_pred chhhHHHHHhhhhhHHHHHHHHHHhhhhhccccCC-C------CCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHH
Q psy16062 244 KRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQT-P------IPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSA 316 (396)
Q Consensus 244 ~~~~~~~~~~~~Ef~gT~~l~~~~~~~~~~~~~~~-~------~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~ 316 (396)
.++++++|++++||+||++++|+++++..+..... + .+...+++.+|++++..+++++++||+|+|||||++.
T Consensus 2 ~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~ 81 (227)
T PF00230_consen 2 LKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAF 81 (227)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhhe
Confidence 35678999999999999999999998654321111 1 1235678899999999999999999999999999999
Q ss_pred HHhcccchhhHHHHHHHHhHHHHHHHHhhhhhCcccccccCCCCCccceEEecCCCCCCChHHHHHHHHHHHHHHhHhhC
Q psy16062 317 FLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC 396 (396)
Q Consensus 317 ~~~~~~~~~~~~~yi~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~~~v~ 396 (396)
++.|+++|++.+.|+++|++|+++|+.+++.++++.... .....+.|.++.+..++++.|+++|++|+++++
T Consensus 82 ~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~--------~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~ 153 (227)
T PF00230_consen 82 ALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSA--------AGIFATTPPPGISLGQAFFSEFIGTFILVLVIL 153 (227)
T ss_dssp HHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTC--------TTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeeecccceeeEEeeccccccccccchhhcccCcccc--------cccccccccccchhhhhhhhhhhhhhHHHhhhh
Confidence 999999999999999999999999999999999875211 111235677788999999999999999999874
No 31
>PF03773 DUF318: Predicted permease; InterPro: IPR005524 This family of predicted integral membrane proteins.
Probab=91.31 E-value=2.5 Score=41.03 Aligned_cols=177 Identities=16% Similarity=0.191 Sum_probs=90.3
Q ss_pred cCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcCCC-CCCCCCC----CCCCccccccC--CCCCCC
Q psy16062 169 GASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDHD-GKNRPEQ----LSPADVETSLG--QIKPPR 241 (396)
Q Consensus 169 G~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~-~~~~~~~----~~~~~~~~tl~--~~~~~~ 241 (396)
...+||..-+.....-+ |+...+|.+.-++-+++.+++.+.+.+++.+ .++++.+ +.+.+.+...+ +.+..+
T Consensus 93 ~p~~n~~~~~~~~~~lg-~~~~~~r~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (307)
T PF03773_consen 93 SPLLNPIVLLLTWAALG-WKFTLIRIVLGLILAILVGLLFSRLFKRREAELPDNRAGALIVASSPESGAAPAQDEAPHAS 171 (307)
T ss_pred hHHhhHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHccccccccchhhhhhhhcccccccccccccccccccc
Confidence 35689977665543333 8888999999999999999999988766511 1111100 00111111111 111112
Q ss_pred ccchhhHHHH-HhhhhhHHHHHHHHHHh--hhhhcccc--------CCCCCCchhHHHHHHHHHHHHHHHhc------CC
Q psy16062 242 FGKRAVKLLE-LCLGEVLGTSMLMFFGC--MSLVQGFS--------QTPIPSMQPGLMFGFVVSTVICIFGH------IS 304 (396)
Q Consensus 242 ~~~~~~~~~~-~~~~Ef~gT~~l~~~~~--~~~~~~~~--------~~~~~~~~~~~~~g~~v~~~i~~~~~------iS 304 (396)
.+++.....+ +..-|+.-..-.+.++. ++..+..- -...+...+.+...+++..-+...+. ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~v~~~lliG~~iaa~i~~~iP~~~l~~~~g~~~~~~ill~~~~g~~l~vcs~~~~pia~~l~ 251 (307)
T PF03773_consen 172 FWRRIKAALRWHFWDEFKMVGPYLLIGVFIAALIQAFIPPEWLSTLLGSNGLLAILLAMLLGVPLYVCSTGDAPIAASLL 251 (307)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHhhcCchHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 2222222222 56777777666666654 23322211 11122333333333333322222221 12
Q ss_pred ccccChHhHHHHHHhcc-------------cchhhHHHHHHHHhHHHHHHHHhhh
Q psy16062 305 GAHLNPSVSVSAFLLEM-------------ITMLELVLYVCSQVLGCLIGVGLVN 346 (396)
Q Consensus 305 G~hlNPAvTl~~~~~~~-------------~~~~~~~~yi~aQ~~Ga~~~~~~~~ 346 (396)
...+.|.-.+++.+.|. +++|....|...=++++++.+.+.+
T Consensus 252 ~~G~~~Ga~lAFLiaGp~~~i~~l~~l~~~fg~r~~~~~~~~v~v~~~l~G~l~~ 306 (307)
T PF03773_consen 252 AKGMSPGAALAFLIAGPMLDIPNLIMLRRVFGKRFVAAYVVLVVVMAILAGYLFN 306 (307)
T ss_pred HhCCCHHHHHHHHHhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 33466776777666652 4677777777777777777666543
No 32
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=84.54 E-value=28 Score=33.13 Aligned_cols=189 Identities=16% Similarity=0.199 Sum_probs=98.3
Q ss_pred CchHHHHHHHHHHHHHHHHHhcc-CccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHHHHHHHHhcccccccccCC
Q psy16062 20 PSMQPGLMFGFVVSTVICIFGHI-SGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSS 98 (396)
Q Consensus 20 ~~~~~a~~~g~~~~~~i~~~~~i-SGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~ 98 (396)
..+.-++++++++...+++-+.. +| |=-.+..-...|++++++.+--++-=.+|=++|++++..++.-.......+
T Consensus 63 ~~lvg~~~F~~GLilVv~~g~ELfT~---n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~ 139 (265)
T COG2116 63 AKLVGGLVFSLGLILVVIAGSELFTS---NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTAN 139 (265)
T ss_pred HHHHHHHHHHHHHHHhhhhCcccccc---chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 45667888888888777765443 22 333344445678899999988888888888888887777762111000000
Q ss_pred -CCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHHHHHHhccCCccCccchhhh
Q psy16062 99 -AGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARS 177 (396)
Q Consensus 99 -~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~ 177 (396)
...........-.-+.+..+.|.--+++-++.++.++....-|... -.-+.+-+-++.. ....+.=...|-..-
T Consensus 140 ~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~~~k~~~---~K~~~m~~pv~~F--v~~GfeH~VANm~~i 214 (265)
T COG2116 140 GQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSYSAKDGA---AKIFAIILPVMLF--VASGFEHSVANMFMI 214 (265)
T ss_pred chhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHhcccchh---hHHHHHHHHHHHH--HHcCCceeeehHHHH
Confidence 0000000111112245667778877777777777776553322211 2223333333333 333333344452221
Q ss_pred hHHHHhhc--cccc-cc---hh-hhhhHH-HHHHHHHHHHHHhhcCC
Q psy16062 178 LAPAIYSN--VWTA-HW---IY-WVAPIL-GSIVSTLLYKYVFSKDH 216 (396)
Q Consensus 178 lg~~~~~~--~~~~-~w---vy-~v~p~~-Ga~la~~l~~~~~~~~~ 216 (396)
.-.+...+ .|.+ .| ++ .+|.++ |+++-++.|.++++++.
T Consensus 215 ~~~~~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~~~~ 261 (265)
T COG2116 215 PWAAVFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYRKQN 261 (265)
T ss_pred HHHHHcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhccccc
Confidence 11222221 3443 22 22 345666 55667788888776553
No 33
>PRK11562 nitrite transporter NirC; Provisional
Probab=79.80 E-value=22 Score=33.95 Aligned_cols=182 Identities=13% Similarity=0.157 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHhcc-CccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHHHHHHHHhcccc--cccccCCCC
Q psy16062 24 PGLMFGFVVSTVICIFGHI-SGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEE--ILFPVSSAG 100 (396)
Q Consensus 24 ~a~~~g~~~~~~i~~~~~i-SGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~--~~~~~~~~~ 100 (396)
.+..+++++...+..=+.. +| |=.....-.+.||.++++.+-.+.-=.+|=++|+.+.-.+.... .... ....
T Consensus 61 ~g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~-~~~~ 136 (268)
T PRK11562 61 MGATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLP-VDTS 136 (268)
T ss_pred HHHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-chhH
Confidence 4555666666555443221 22 33344345677889999888777777777777776665554321 1100 0000
Q ss_pred CccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHHHHHHhccCCccCccchhhhhHH
Q psy16062 101 LSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAP 180 (396)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~ 180 (396)
....... -..+.+..+.|+-=+++-++..+.++.....+ ...... .+-+.++....+. +.=...|=- -+..
T Consensus 137 ~~~~ia~--~K~~~~~~~~f~~gI~CNwLVclavw~~~~~~--~~gKi~--~i~~pI~~Fv~~G--FEH~IANm~-~~~l 207 (268)
T PRK11562 137 IVHSVAL--AKTTAPAMVLFFKGALCNWLVCLAIWMAIRTE--GAAKFI--AIWWCLLAFIASG--YEHSVANMT-LFAL 207 (268)
T ss_pred HHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcc--ccchhH--HHHHHHHHHHHcC--CcchhHhHH-HHHH
Confidence 0000000 11134677788888888888887776553322 111222 2222222222222 111223411 1211
Q ss_pred HHhhc-----ccc---ccch-hhhhhHHHH-HHHHHHHHHHhhcCCCC
Q psy16062 181 AIYSN-----VWT---AHWI-YWVAPILGS-IVSTLLYKYVFSKDHDG 218 (396)
Q Consensus 181 ~~~~~-----~~~---~~wv-y~v~p~~Ga-~la~~l~~~~~~~~~~~ 218 (396)
.++.+ .|. +-++ =.+|.++|+ ++-++.|.+.+++++++
T Consensus 208 ~~~~~~~~~~~~~~~~~nlipvtLGNivGG~v~vg~~y~~~~~~~~~~ 255 (268)
T PRK11562 208 SWFGHHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRP 255 (268)
T ss_pred HHHccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCc
Confidence 22211 111 1122 246888877 67778888887665433
No 34
>COG0701 Predicted permeases [General function prediction only]
Probab=69.62 E-value=1.2e+02 Score=29.79 Aligned_cols=101 Identities=18% Similarity=0.173 Sum_probs=58.2
Q ss_pred ccCccch-hhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhh-cCCCCC-CCCC-CCCCCccccccCCCCCCCcc
Q psy16062 168 TGASMNP-ARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFS-KDHDGK-NRPE-QLSPADVETSLGQIKPPRFG 243 (396)
Q Consensus 168 tG~~lNP-Ar~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~-~~~~~~-~~~~-~~~~~~~~~tl~~~~~~~~~ 243 (396)
+...+|| +...-.+.+.++|+-...|.++-++=+++.+++..+++. .+..+. ..+. +......+...++..+..+.
T Consensus 102 aaP~iNp~~i~~t~~~fg~~~~~~~~r~v~~li~avliG~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 181 (317)
T COG0701 102 AAPLINPIAITSTYAAFGSQWGATLIRVVAGLIIAVLIGLIVSKLFKLWQSVELFILPSWTASPLHGHGPSAAGFKSFLK 181 (317)
T ss_pred cCCccCHHHHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCcccCccchhccccccHH
Confidence 5567999 444455556778999999999999999999998888774 211111 1110 00011111111111111222
Q ss_pred chhhHHHHHhhhhhHHHHHHHHHHh
Q psy16062 244 KRAVKLLELCLGEVLGTSMLMFFGC 268 (396)
Q Consensus 244 ~~~~~~~~~~~~Ef~gT~~l~~~~~ 268 (396)
+|-+.+.++..-|+-.+.-+++++.
T Consensus 182 ~~l~~~l~~~~~~~~~v~~yliiGv 206 (317)
T COG0701 182 ERLKRALWNAIDEFGSVGPYLIIGV 206 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666777778877777777765
No 35
>PF09512 ThiW: Thiamine-precursor transporter protein (ThiW); InterPro: IPR012652 Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.
Probab=63.27 E-value=56 Score=28.23 Aligned_cols=25 Identities=20% Similarity=0.448 Sum_probs=19.9
Q ss_pred hhhHHHHHHHHhHHHHHHHHhhhhh
Q psy16062 324 MLELVLYVCSQVLGCLIGVGLVNII 348 (396)
Q Consensus 324 ~~~~~~yi~aQ~~Ga~~~~~~~~~~ 348 (396)
+...+.+..+-+.|+.+|..+++.+
T Consensus 123 ~~~v~~F~~St~~Ga~ig~~~l~~L 147 (150)
T PF09512_consen 123 FFFVPPFLISTLIGAIIGYILLKAL 147 (150)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567788888889998888887754
No 36
>PRK09713 focB putative formate transporter; Provisional
Probab=57.73 E-value=1.1e+02 Score=29.51 Aligned_cols=110 Identities=10% Similarity=0.059 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHHHHHHHhcc-CccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHHHHHHHHhccc-ccccccCCC
Q psy16062 22 MQPGLMFGFVVSTVICIFGHI-SGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPE-EILFPVSSA 99 (396)
Q Consensus 22 ~~~a~~~g~~~~~~i~~~~~i-SGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~-~~~~~~~~~ 99 (396)
+..++.+.+++...+..-+.. +| |=. ++.-...||.++++.+-.+.-=.+|=++|+.+.-.+... ..... .+.
T Consensus 68 ll~g~~F~vGLilIv~~g~ELfTg---N~~-~~~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~-~~~ 142 (282)
T PRK09713 68 LVGGLCFTLGFILLAVCGTSLFTS---SVM-TVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMS-ENA 142 (282)
T ss_pred HHHHHHHHHHHHHHHHhCccccHH---HHH-HHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc-cch
Confidence 334666666666666553332 22 222 233356889999999855555455555554444333221 11000 000
Q ss_pred CC---ccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhc
Q psy16062 100 GL---SNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVW 138 (396)
Q Consensus 100 ~~---~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~ 138 (396)
.. ....... ..+.+.++.|+--+++-++..+.++...
T Consensus 143 ~~~~~~~~ia~~--K~~~~~~~~F~~gI~CN~lVclaV~~~~ 182 (282)
T PRK09713 143 MWGVAVLHCAEG--KMHHTFTESVSLGIMCNLMVCLALWMSY 182 (282)
T ss_pred hHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 0000011 1245788888888888888888887543
No 37
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=55.68 E-value=28 Score=33.04 Aligned_cols=60 Identities=23% Similarity=0.257 Sum_probs=33.1
Q ss_pred chhHHHHHHHHHHHHHHHhcC-CccccChHhHHHHHHhcccchhhHHHHHHHHhHHHHHHHHhh
Q psy16062 283 MQPGLMFGFVVSTVICIFGHI-SGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLV 345 (396)
Q Consensus 283 ~~~~~~~g~~v~~~i~~~~~i-SG~hlNPAvTl~~~~~~~~~~~~~~~yi~aQ~~Ga~~~~~~~ 345 (396)
+.-++.+++++..++.+-+.. +| |=-........++++|++.+-=+.-=.+|=++|++++
T Consensus 65 lvg~~~F~~GLilVv~~g~ELfT~---n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~ 125 (265)
T COG2116 65 LVGGLVFSLGLILVVIAGSELFTS---NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFV 125 (265)
T ss_pred HHHHHHHHHHHHHhhhhCcccccc---chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 334666777776666665543 32 3333334456678888876655444444444444443
No 38
>PRK10805 formate transporter; Provisional
Probab=43.54 E-value=3.1e+02 Score=26.40 Aligned_cols=110 Identities=12% Similarity=0.052 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHHHHHHhc-cCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHHHHHHHHhcccc-cccccCCC
Q psy16062 22 MQPGLMFGFVVSTVICIFGH-ISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEE-ILFPVSSA 99 (396)
Q Consensus 22 ~~~a~~~g~~~~~~i~~~~~-iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~-~~~~~~~~ 99 (396)
+..++.+.+++...+..=+. .+| |-..++ ..+.||.++++.+-.+.-=.+|=++|+++.-.+.... ......+.
T Consensus 69 ll~~~~F~vGlilIvl~g~eLFTg---n~l~~~-~~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~ 144 (285)
T PRK10805 69 LVGGICFSLGLILCVVCGADLFTS---TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQ 144 (285)
T ss_pred HHHHHHHHHHHHHHHHhCcccchh---hHHHHH-HHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccH
Confidence 33456666666666555333 234 655554 4678999999988555555555555555543332111 00000000
Q ss_pred C--CccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q psy16062 100 G--LSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGV 137 (396)
Q Consensus 100 ~--~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~ 137 (396)
. ........ ..+.+.++.|+-=+++-++..+.++..
T Consensus 145 ~~~~~~~~a~~--K~~~~~~~~f~~gI~CN~lVclaV~~~ 182 (285)
T PRK10805 145 WGLNVLQTADH--KVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_pred HHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000111 123567888888888888888877644
No 39
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=43.44 E-value=1.2e+02 Score=28.63 Aligned_cols=104 Identities=18% Similarity=0.171 Sum_probs=51.4
Q ss_pred hHHHHHHHHHHHHHHHhcC-CccccChHhHHHHHHhcccchhhHHHHHH----HHhHHHHHHHHhhhhhCcccccccCCC
Q psy16062 285 PGLMFGFVVSTVICIFGHI-SGAHLNPSVSVSAFLLEMITMLELVLYVC----SQVLGCLIGVGLVNIITPEEILFPVGS 359 (396)
Q Consensus 285 ~~~~~g~~v~~~i~~~~~i-SG~hlNPAvTl~~~~~~~~~~~~~~~yi~----aQ~~Ga~~~~~~~~~~~~~~~~~~~~~ 359 (396)
.++.+++++..++..-+.. +| |-......++.||.+|++.+--+. +-++|+++-+.+++...... +.+.-
T Consensus 60 ~g~~F~~Gl~lIv~~g~eLfTg---n~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~-~~~~~- 134 (250)
T PF01226_consen 60 GGLVFPIGLVLIVFLGGELFTG---NMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFM-SSPAM- 134 (250)
T ss_dssp HHHHHTHHHHHHHHHT---TTT---TCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGG-TTTHH-
T ss_pred HHHHHHHHHHHHHHhcchhccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc-ccHHH-
Confidence 3555666666555554433 44 777666677888889887665554 45555555444444332211 00000
Q ss_pred CCccceEEecCCCCCCChHHHHHHHHHHHHHHhHhh
Q psy16062 360 AGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTC 395 (396)
Q Consensus 360 ~~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~~~v 395 (396)
.+......... .+.+.++.|+-=+++-.+..+.|
T Consensus 135 ~~~~~~~a~~K--~~~~~~~~f~~gI~cN~lVclav 168 (250)
T PF01226_consen 135 GEYLISVAEHK--VSHTFWELFFRGILCNWLVCLAV 168 (250)
T ss_dssp HHHHHHHHHCC--SSS-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--hCCCHHHHHHHHHHHHHHHHHHH
Confidence 00000011111 13467888887777777665544
No 40
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=41.70 E-value=9.3 Score=31.68 Aligned_cols=21 Identities=14% Similarity=0.139 Sum_probs=17.9
Q ss_pred hcCCccccChHhHHHHHHhcc
Q psy16062 301 GHISGAHLNPSVSVSAFLLEM 321 (396)
Q Consensus 301 ~~iSG~hlNPAvTl~~~~~~~ 321 (396)
+.-|+||+||.+.++..+.++
T Consensus 5 ~~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 5 TGGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp EESSHHHHHHHHHHHHHHHHT
T ss_pred EcCChhHHHHHHHHHHHHhcc
Confidence 345899999999999999865
No 41
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=40.35 E-value=90 Score=29.11 Aligned_cols=90 Identities=18% Similarity=0.108 Sum_probs=49.3
Q ss_pred ChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHHHHHHHHhcccccccccCC-CCCccceEeccCCCCCCHHHHHHHHHHH
Q psy16062 48 NPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSS-AGLSNGFCTTVPHASLTTVQAFLAEFFS 126 (396)
Q Consensus 48 NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 126 (396)
|-.....-++.||.++++.+-.+.-=.+|=++|+.+.-.+........+.+ +..+...-...-..+.+.++.++-=+++
T Consensus 68 n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gilc 147 (239)
T TIGR00790 68 NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAEHKAHHTFVEAFFLGILC 147 (239)
T ss_pred chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 444444456789999999888877777777777766655542211000000 0000000000111235677778877888
Q ss_pred HHHHHHHHHHh
Q psy16062 127 TSLLVFTCCGV 137 (396)
Q Consensus 127 T~~lv~~il~~ 137 (396)
.++..+.+...
T Consensus 148 n~lV~lav~~~ 158 (239)
T TIGR00790 148 NWLVCLAVWMS 158 (239)
T ss_pred HHHHHHHHHHH
Confidence 88877777643
No 42
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=36.43 E-value=3.5e+02 Score=27.00 Aligned_cols=33 Identities=30% Similarity=0.391 Sum_probs=22.1
Q ss_pred HHHhcCCChhHHHHHHHHHhhhHHHHHHHHHHhc
Q psy16062 55 AFLLEMITMVELVLYVCSQVLGCLIGVGLVNIIT 88 (396)
Q Consensus 55 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~ 88 (396)
.+++.|+++.+= .||.+=++|+++++.+...+.
T Consensus 20 ~~Lr~ki~~lqk-~~IPasvIgGli~~il~~~l~ 52 (368)
T PF03616_consen 20 KFLRAKIPFLQK-LFIPASVIGGLIFAILPLILG 52 (368)
T ss_pred HHHHHHhHHHHH-ccCCchHHHHHHHHHHHHHHH
Confidence 445666665543 377888889999877755444
No 43
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=34.91 E-value=14 Score=30.51 Aligned_cols=20 Identities=15% Similarity=0.164 Sum_probs=17.3
Q ss_pred ccCccccChHHHHHHHHhcC
Q psy16062 41 HISGAHLNPSVSVSAFLLEM 60 (396)
Q Consensus 41 ~iSGaH~NPaVTla~~l~g~ 60 (396)
.=|+||+||.+.++..+.++
T Consensus 6 ~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 6 GGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp ESSHHHHHHHHHHHHHHHHT
T ss_pred cCChhHHHHHHHHHHHHhcc
Confidence 34789999999999999876
No 44
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=33.29 E-value=10 Score=37.47 Aligned_cols=22 Identities=27% Similarity=0.525 Sum_probs=18.6
Q ss_pred HHhcCCccccChHhHHHHHHhc
Q psy16062 299 IFGHISGAHLNPSVSVSAFLLE 320 (396)
Q Consensus 299 ~~~~iSG~hlNPAvTl~~~~~~ 320 (396)
+.+.-+|||+.||+.++-.+..
T Consensus 6 ~~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 6 FTGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EEcCCcHHHHHHHHHHHHHHHh
Confidence 3466799999999999998874
No 45
>TIGR02005 PTS-IIBC-alpha PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose.
Probab=32.99 E-value=6.1e+02 Score=26.75 Aligned_cols=13 Identities=38% Similarity=0.345 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHh
Q psy16062 123 EFFSTSLLVFTCCGV 137 (396)
Q Consensus 123 E~~~T~~lv~~il~~ 137 (396)
|| ||+++.-.+.+
T Consensus 327 EF--tFlFvAP~Ly~ 339 (524)
T TIGR02005 327 EF--TFLFIAPYLFV 339 (524)
T ss_pred HH--HHHHHHHHHHH
Confidence 55 56655555443
No 46
>PRK15120 lipopolysaccharide ABC transporter permease LptF; Provisional
Probab=28.67 E-value=1.3e+02 Score=29.76 Aligned_cols=22 Identities=14% Similarity=0.040 Sum_probs=16.0
Q ss_pred hHHHHHhhhhhHHHHHHHHHHhh
Q psy16062 247 VKLLELCLGEVLGTSMLMFFGCM 269 (396)
Q Consensus 247 ~~~~~~~~~Ef~gT~~l~~~~~~ 269 (396)
.+++++ ++.=+.++++.++++-
T Consensus 264 ~El~~R-la~Pl~~l~l~llavp 285 (366)
T PRK15120 264 AELHWR-LTLVFSVFIMALMVVP 285 (366)
T ss_pred HHHHHH-HHHHHHHHHHHHHHhh
Confidence 344444 7888999999888764
No 47
>KOG3030|consensus
Probab=28.56 E-value=1.9e+02 Score=28.30 Aligned_cols=48 Identities=25% Similarity=0.625 Sum_probs=33.4
Q ss_pred cCccchhhhhHHHHhh--------ccccccch-hhhhhHHHHHHHHHHHHHHhhcCC
Q psy16062 169 GASMNPARSLAPAIYS--------NVWTAHWI-YWVAPILGSIVSTLLYKYVFSKDH 216 (396)
Q Consensus 169 G~~lNPAr~lg~~~~~--------~~~~~~wv-y~v~p~~Ga~la~~l~~~~~~~~~ 216 (396)
+-.+.|-..|++.... .++++||. =+.|-++|+.+|...++.+...-.
T Consensus 210 ~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~v~~~f~ 266 (317)
T KOG3030|consen 210 GRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRYVFPNFK 266 (317)
T ss_pred chhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 3445666666554432 36778887 467889999999999998766544
No 48
>COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism]
Probab=26.52 E-value=6.3e+02 Score=24.86 Aligned_cols=24 Identities=29% Similarity=0.522 Sum_probs=19.5
Q ss_pred hhhhhHHHHHHHHHHHHHHhhcCC
Q psy16062 193 YWVAPILGSIVSTLLYKYVFSKDH 216 (396)
Q Consensus 193 y~v~p~~Ga~la~~l~~~~~~~~~ 216 (396)
+.+.|++|..++.++|+.+.....
T Consensus 139 wvlsPii~~~ia~~l~~~~~~~~~ 162 (326)
T COG0306 139 WVLSPILGGVLAYLLYSLLRRLIV 162 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567999999999999988765443
No 49
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=25.01 E-value=8.5e+02 Score=25.86 Aligned_cols=53 Identities=17% Similarity=0.183 Sum_probs=38.0
Q ss_pred HHhccCccccC---hHHHHHHHHhcCCChhHHHHHHHHHhhhHHHHHHHHHHhccc
Q psy16062 38 IFGHISGAHLN---PSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPE 90 (396)
Q Consensus 38 ~~~~iSGaH~N---PaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~ 90 (396)
+.-..++|+.- .+|+.+++-+-.-|.++...++...++|+.+|..+.+.++|.
T Consensus 358 i~t~W~~G~~~~~~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~ 413 (650)
T PF04632_consen 358 IATGWPSGATAVMMAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPH 413 (650)
T ss_pred HHcCCChhHHHHHHHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 33344455553 334444444456788999999999999999999999998874
No 50
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=24.17 E-value=3.9e+02 Score=25.07 Aligned_cols=116 Identities=20% Similarity=0.117 Sum_probs=64.8
Q ss_pred hHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHHHHHHHHhcccccccccCCCCC
Q psy16062 22 MQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGL 101 (396)
Q Consensus 22 ~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~ 101 (396)
+..++.+++++...+..=+.. --=|-.+...-++.||.++++.+--+.-=.+|=++|+.+.-.+........+.+...
T Consensus 58 l~~g~~F~~Gl~lIv~~g~eL--fTgn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~~ 135 (250)
T PF01226_consen 58 LVGGLVFPIGLVLIVFLGGEL--FTGNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAMG 135 (250)
T ss_dssp HHHHHHHTHHHHHHHHHT-----TTTTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHHH
T ss_pred HHHHHHHHHHHHHHHHhcchh--cccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHH
Confidence 345666666666665553332 222666666677889999999887777777777777666655543211100000000
Q ss_pred ccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhcc
Q psy16062 102 SNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWD 139 (396)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~ 139 (396)
..-.-...-.-+.+.++.|+-=+++.++..+.++....
T Consensus 136 ~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~~~ 173 (250)
T PF01226_consen 136 EYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLAFA 173 (250)
T ss_dssp HHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00000001112457888888888888888888886643
No 51
>PF05620 DUF788: Protein of unknown function (DUF788); InterPro: IPR008506 This family consists of several eukaryotic proteins of unknown function.
Probab=23.33 E-value=50 Score=29.09 Aligned_cols=17 Identities=24% Similarity=0.302 Sum_probs=12.1
Q ss_pred cchhhhhhHHHHHHHHH
Q psy16062 190 HWIYWVAPILGSIVSTL 206 (396)
Q Consensus 190 ~wvy~v~p~~Ga~la~~ 206 (396)
.|+|++-|.-+....--
T Consensus 117 w~l~LvIP~ya~Ykl~~ 133 (170)
T PF05620_consen 117 WWLYLVIPGYAIYKLWG 133 (170)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 37788899888775433
No 52
>PRK10478 putative PTS system fructose-like transporter subunit EIIC; Provisional
Probab=23.08 E-value=2.6e+02 Score=27.96 Aligned_cols=23 Identities=17% Similarity=0.300 Sum_probs=18.2
Q ss_pred ccchhhhhhHHHHHHHHHHHHHH
Q psy16062 189 AHWIYWVAPILGSIVSTLLYKYV 211 (396)
Q Consensus 189 ~~wvy~v~p~~Ga~la~~l~~~~ 211 (396)
+.|.|.++=++|.++++++..++
T Consensus 312 ~~l~~iiailig~vvtavl~~~~ 334 (359)
T PRK10478 312 GKLGYIAAVAVGAVVTAVCVNVL 334 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 35778888899999988877655
No 53
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=23.07 E-value=2.1e+02 Score=26.68 Aligned_cols=37 Identities=27% Similarity=0.282 Sum_probs=22.4
Q ss_pred ChHhHHHHHHhcccchhhHHHHHHHHhHHHHHHHHhh
Q psy16062 309 NPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLV 345 (396)
Q Consensus 309 NPAvTl~~~~~~~~~~~~~~~yi~aQ~~Ga~~~~~~~ 345 (396)
|-......++.||.+|++.+--+.-=++|=++|++++
T Consensus 68 n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~ 104 (239)
T TIGR00790 68 NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFV 104 (239)
T ss_pred chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555545567888888877765555455555555443
No 54
>TIGR00770 Dcu anaerobic c4-dicarboxylate membrane transporter family protein. These proteins are members of th C4-Dicarboxylate Uptake (Dcu) Family (TC 2.A.13). Most proteins in this family have 12 GES predicted transmembrane regions; however one member has 10 experimentally determined transmembrane regions with both the N- and C-termini localized to the periplasm. The two Escherichia coli proteins, DcuA and DcuB, transport aspartate, malate, fumarate and succinate, and function as antiporters with any two of these substrates. Since DcuA is encoded in an operon with the gene for aspartase, and DcuB is encoded in an operon with the gene for fumarase, their physiological functions may be to catalyze aspartate:fumarate and fumarate:malate exchange during the anaerobic utilization of aspartate and fumarate, respectively.
Probab=21.97 E-value=8.3e+02 Score=24.94 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHH
Q psy16062 22 MQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFL 57 (396)
Q Consensus 22 ~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l 57 (396)
+..++.=|+++.++++.||- .-.|.|.-|-+-.+.
T Consensus 18 ~~~g~~g~~g~~~~~~~~~~-~~~~~~~~vI~~il~ 52 (430)
T TIGR00770 18 IGLGYAGGLGVLILCFGFGL-KPGKIPFDVILIIMA 52 (430)
T ss_pred HHHHHHHHHHHHHHHHHcCC-CCCCCCHHHHHHHHH
Confidence 44566667777777666654 335565554444333
No 55
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=21.63 E-value=1.3e+02 Score=31.14 Aligned_cols=16 Identities=31% Similarity=0.578 Sum_probs=9.1
Q ss_pred CccCccchh-hhhHHHH
Q psy16062 167 YTGASMNPA-RSLAPAI 182 (396)
Q Consensus 167 ~tG~~lNPA-r~lg~~~ 182 (396)
..|+..||- ...+..+
T Consensus 172 ~~~~~~npf~~~iAq~i 188 (465)
T PF03606_consen 172 FAGPPSNPFTVGIAQKI 188 (465)
T ss_pred hcCCccChHHHHHHHHh
Confidence 456778984 3344444
No 56
>KOG1330|consensus
Probab=21.19 E-value=2.3e+02 Score=29.40 Aligned_cols=27 Identities=26% Similarity=0.588 Sum_probs=21.8
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHhhcC
Q psy16062 189 AHWIYWVAPILGSIVSTLLYKYVFSKD 215 (396)
Q Consensus 189 ~~wvy~v~p~~Ga~la~~l~~~~~~~~ 215 (396)
|.|-|++.+.+|.+++.+++.+...|+
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 788999999999999998875554333
Done!