Query psy16062
Match_columns 396
No_of_seqs 291 out of 2137
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 19:52:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16062.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16062hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyz_A Aquaporin-4; water tran 100.0 4E-49 1.4E-53 378.2 14.9 208 1-217 64-274 (340)
2 3gd8_A Aquaporin-4; proton exc 100.0 7.5E-49 2.6E-53 360.9 14.5 204 2-214 17-223 (223)
3 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 6.1E-49 2.1E-53 369.8 13.7 207 2-218 25-232 (266)
4 2zz9_A Aquaporin-4; water tran 100.0 1.5E-48 5.2E-53 371.5 14.9 208 2-218 26-236 (301)
5 2b6o_A Aquaporin-0, lens fiber 100.0 1.1E-47 3.9E-52 361.2 15.6 205 2-216 23-227 (263)
6 1ldf_A Glycerol uptake facilit 100.0 2.3E-48 8E-53 369.7 9.0 219 2-220 21-263 (281)
7 1j4n_A Aquaporin 1; membrane p 100.0 5E-48 1.7E-52 365.1 10.8 206 2-216 24-237 (271)
8 2w2e_A AQY1, aquaporin, aquapo 100.0 1.2E-46 4E-51 356.3 15.8 210 2-224 58-276 (279)
9 2o9g_A Aquaporin Z; integral m 100.0 6.9E-47 2.4E-51 350.5 13.1 210 2-214 18-232 (234)
10 3llq_A Aquaporin Z 2; aquapori 100.0 2.2E-46 7.4E-51 349.3 13.9 207 2-212 43-253 (256)
11 3cn5_A Aquaporin; membrane pro 100.0 6.4E-47 2.2E-51 361.2 9.5 206 2-215 74-290 (304)
12 3c02_A Aquaglyceroporin; membr 100.0 4.5E-46 1.5E-50 349.9 7.2 211 2-216 23-246 (258)
13 2f2b_A Aquaporin AQPM; protein 100.0 9.5E-45 3.2E-49 339.0 12.7 204 2-213 18-245 (246)
14 3llq_A Aquaporin Z 2; aquapori 100.0 4.5E-31 1.5E-35 246.0 12.7 149 246-396 26-176 (256)
15 2w2e_A AQY1, aquaporin, aquapo 100.0 2.5E-30 8.7E-35 244.5 13.4 140 245-396 40-187 (279)
16 3cn5_A Aquaporin; membrane pro 100.0 2.9E-30 1E-34 246.2 13.9 146 243-396 54-203 (304)
17 3gd8_A Aquaporin-4; proton exc 100.0 4.1E-30 1.4E-34 236.1 14.0 140 248-396 2-144 (223)
18 3iyz_A Aquaporin-4; water tran 100.0 4.1E-30 1.4E-34 246.5 14.3 142 246-396 48-192 (340)
19 2zz9_A Aquaporin-4; water tran 100.0 2.3E-29 7.9E-34 239.5 15.3 142 246-396 9-153 (301)
20 2f2b_A Aquaporin AQPM; protein 100.0 5.9E-29 2E-33 232.1 17.7 216 115-350 3-245 (246)
21 2b6o_A Aquaporin-0, lens fiber 100.0 4.4E-28 1.5E-32 227.8 22.2 216 115-352 8-226 (263)
22 1ldf_A Glycerol uptake facilit 100.0 4.6E-30 1.6E-34 243.8 8.6 150 247-396 5-164 (281)
23 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 3E-29 1E-33 235.8 13.8 142 245-396 7-148 (266)
24 1j4n_A Aquaporin 1; membrane p 100.0 6.2E-29 2.1E-33 234.6 14.1 144 244-396 5-156 (271)
25 2o9g_A Aquaporin Z; integral m 99.9 3.2E-27 1.1E-31 218.5 18.1 223 115-351 3-232 (234)
26 3c02_A Aquaglyceroporin; membr 99.9 1.1E-26 3.8E-31 218.0 12.4 224 114-352 7-245 (258)
27 3kcu_A Probable formate transp 61.0 62 0.0021 29.8 10.6 112 21-139 68-184 (285)
28 3s2u_A UDP-N-acetylglucosamine 42.6 2.9 9.8E-05 40.0 -1.9 22 300-321 8-29 (365)
29 3s2u_A UDP-N-acetylglucosamine 32.9 10 0.00034 36.0 0.3 21 40-60 9-29 (365)
30 3kcu_A Probable formate transp 28.0 1.1E+02 0.0036 28.2 6.4 103 285-395 71-179 (285)
31 3tds_E Formate/nitrite transpo 20.0 2.8E+02 0.0096 25.1 7.5 112 21-138 64-178 (268)
No 1
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=4e-49 Score=378.16 Aligned_cols=208 Identities=36% Similarity=0.680 Sum_probs=185.8
Q ss_pred CEEEEeecceecccc---CCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhH
Q psy16062 1 MLMFFGCMSLVQGFS---QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGC 77 (396)
Q Consensus 1 ~lv~~g~g~~~~~~~---~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa 77 (396)
+|+|+|||++++... ..+.+++.++++||+++++++|+++++||||+|||||+++++.|+++|++++.||++|++||
T Consensus 64 lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~YiiAQ~lGA 143 (340)
T 3iyz_A 64 IFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGA 143 (340)
T ss_pred HHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 467889999886432 12348899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHH
Q psy16062 78 LIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVI 157 (396)
Q Consensus 78 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v 157 (396)
++|++++|.++++... ...+.+.+.++.+..++|+.|+++||+|+++++.+.|+++....+..|+.||+++
T Consensus 144 ~~GA~lv~~~~~~~~~---------~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~~~~~pl~IGl~v 214 (340)
T 3iyz_A 144 IIGAGILYLVTPPSVV---------GGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSV 214 (340)
T ss_pred HHHHHHHHHhcchhhc---------CceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCCcccchhhHHHHHH
Confidence 9999999999886542 2345566667789999999999999999999999998877655568899999999
Q ss_pred HHHHHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcCCC
Q psy16062 158 ALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDHD 217 (396)
Q Consensus 158 ~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~ 217 (396)
.+.+..++++||++||||||||||++.++|+++||||+||++|+++|+++|++++.|+++
T Consensus 215 ~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~~~ 274 (340)
T 3iyz_A 215 AIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVE 274 (340)
T ss_pred HHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCChh
Confidence 888888889999999999999999999999999999999999999999999999987754
No 2
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-49 Score=360.91 Aligned_cols=204 Identities=36% Similarity=0.670 Sum_probs=181.3
Q ss_pred EEEEeecceecccc---CCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHH
Q psy16062 2 LMFFGCMSLVQGFS---QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCL 78 (396)
Q Consensus 2 lv~~g~g~~~~~~~---~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~ 78 (396)
|+|+|||++++... .++.+++.++++||+++++.+|+++++||||+|||||+++++.|+++|+|++.|+++|++||+
T Consensus 17 lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGA~ 96 (223)
T 3gd8_A 17 FVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAI 96 (223)
T ss_dssp HHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 57789999886421 223478999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHH
Q psy16062 79 IGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIA 158 (396)
Q Consensus 79 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v~ 158 (396)
+|+.++|.+++++... ..+.+.++++.+..++++.|+++||+|+++++.+.|+|++...+..|+.||+.+.
T Consensus 97 ~ga~lv~~~~~~~~~~---------~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~pl~iGl~v~ 167 (223)
T 3gd8_A 97 IGAGILYLVTPPSVVG---------GLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVA 167 (223)
T ss_dssp HHHHHHHHHSCHHHHT---------TTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCCCSCHHHHHHHHHH
T ss_pred HHHHHHHhhccccccc---------ceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCccCCccHHHHHHHH
Confidence 9999999999875431 1233456667899999999999999999999999998876555688999999998
Q ss_pred HHHHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhc
Q psy16062 159 LCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSK 214 (396)
Q Consensus 159 ~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~ 214 (396)
..+...+++||++||||||||||+++++|+++|+||++|++|+++++++|++++.|
T Consensus 168 ~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 168 IGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp HHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 88888888999999999999999999999999999999999999999999998764
No 3
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.1e-49 Score=369.83 Aligned_cols=207 Identities=29% Similarity=0.521 Sum_probs=184.5
Q ss_pred EEEEeecceeccccCCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHHH
Q psy16062 2 LMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGV 81 (396)
Q Consensus 2 lv~~g~g~~~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~ 81 (396)
|+|+|||++.+....+ .+++.++++||+++++.+|+++++||||+|||||+++++.|+++|++++.|+++|++||++|+
T Consensus 25 lv~~g~g~~~~~~~~~-~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGA~~ga 103 (266)
T 3d9s_A 25 FVFFGLGSALKWPSAL-PTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGA 103 (266)
T ss_dssp HHHHHHHHHSCCSSSC-CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCC-ccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 5678999886543332 478999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHHHHH
Q psy16062 82 GLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCS 161 (396)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v~~~~ 161 (396)
++++.+++++.. ...+.+.|.++.+..++++.|+++||+|+++++.+.|+++....+..|+.||+++...+
T Consensus 104 ~l~~~~~~~~~~---------~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl~IGl~v~~~~ 174 (266)
T 3d9s_A 104 GILYGVAPLNAR---------GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGH 174 (266)
T ss_dssp HHHHHHSCHHHH---------TTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHcccccc---------CceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCccchHHHHHHHHHHHHH
Confidence 999999986432 12344566677899999999999999999999999988776555689999999999999
Q ss_pred HhccCCccCccchhhhhHHHHhhccccc-cchhhhhhHHHHHHHHHHHHHHhhcCCCC
Q psy16062 162 ITVGPYTGASMNPARSLAPAIYSNVWTA-HWIYWVAPILGSIVSTLLYKYVFSKDHDG 218 (396)
Q Consensus 162 ~~~~~~tG~~lNPAr~lg~~~~~~~~~~-~wvy~v~p~~Ga~la~~l~~~~~~~~~~~ 218 (396)
+..+++||++||||||||||+++++|++ +||||++|++|+++++++|++++.|+.+.
T Consensus 175 ~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~~~ 232 (266)
T 3d9s_A 175 LVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLS 232 (266)
T ss_dssp HHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred HHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCCchh
Confidence 9999999999999999999999999998 99999999999999999999998776533
No 4
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=1.5e-48 Score=371.53 Aligned_cols=208 Identities=36% Similarity=0.669 Sum_probs=181.4
Q ss_pred EEEEeecceecccc---CCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHH
Q psy16062 2 LMFFGCMSLVQGFS---QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCL 78 (396)
Q Consensus 2 lv~~g~g~~~~~~~---~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~ 78 (396)
|+|+|||++++... ....+++.++++||+++++.+|+++++||||+|||||+++++.|+++|++++.|+++|++||+
T Consensus 26 Lv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~YiiAQ~lGAi 105 (301)
T 2zz9_A 26 FVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAI 105 (301)
T ss_dssp HHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSCTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 57889999886542 123478899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHH
Q psy16062 79 IGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIA 158 (396)
Q Consensus 79 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v~ 158 (396)
+|++++|.++++... ...+.+.+.++.+..++++.|+++||+|+++++.+.|+++....+..|+.||+.+.
T Consensus 106 ~Ga~lv~~~~~~~~~---------~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~~~~~~pl~IGl~v~ 176 (301)
T 2zz9_A 106 IGAGILYLVTPPSVV---------GGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVA 176 (301)
T ss_dssp HHHHHHHTTSCSCGG---------GTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSCCSSCHHHHHHHHHH
T ss_pred HHHHHHHHhcccccc---------CceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCccchHhHHHHHHHH
Confidence 999999999987542 12233456667899999999999999999999999888776555689999999998
Q ss_pred HHHHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcCCCC
Q psy16062 159 LCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDG 218 (396)
Q Consensus 159 ~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~ 218 (396)
..++..+++||++||||||||||++.++|+++|+||++|++|+++|+++|++++.++.+.
T Consensus 177 i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~~~~~ 236 (301)
T 2zz9_A 177 IGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVEL 236 (301)
T ss_dssp HHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC-----
T ss_pred HHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCCchhh
Confidence 888888899999999999999999999999999999999999999999999998765443
No 5
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=1.1e-47 Score=361.16 Aligned_cols=205 Identities=32% Similarity=0.574 Sum_probs=182.2
Q ss_pred EEEEeecceeccccCCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHHH
Q psy16062 2 LMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGV 81 (396)
Q Consensus 2 lv~~g~g~~~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~ 81 (396)
|+++|||++..... ...+++.++++||+++++.+++++++||||+|||||+++++.|+++|++++.|+++|++||++|+
T Consensus 23 Lv~~g~g~~~~~~~-~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga 101 (263)
T 2b6o_A 23 YVFFGLGASLRWAP-GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGA 101 (263)
T ss_dssp HHHHHHHHHSCCCS-SSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC-CCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 56778888765322 23378899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHHHHH
Q psy16062 82 GLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCS 161 (396)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v~~~~ 161 (396)
.+++.+++++... ....+.+.++.+..++++.|+++||+|+++++.+.|++++...+..|+.||+.+...+
T Consensus 102 ~l~~~~~~~~~~~---------~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl~IGl~v~~~~ 172 (263)
T 2b6o_A 102 AVLYSVTPPAVRG---------NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGH 172 (263)
T ss_dssp HHHHHHSCTTTCS---------SCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHccccccc---------ccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHHHHHHH
Confidence 9999999865421 1233455667899999999999999999999999888776555689999999999999
Q ss_pred HhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcCC
Q psy16062 162 ITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDH 216 (396)
Q Consensus 162 ~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~ 216 (396)
+..+++||++||||||||||+++++|+++||||++|++|+++++++|++++.++.
T Consensus 173 ~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 227 (263)
T 2b6o_A 173 LFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRL 227 (263)
T ss_dssp HHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred HhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 9999999999999999999999999999999999999999999999999987654
No 6
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=2.3e-48 Score=369.73 Aligned_cols=219 Identities=26% Similarity=0.405 Sum_probs=183.2
Q ss_pred EEEEeecceecccc-CCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHH
Q psy16062 2 LMFFGCMSLVQGFS-QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIG 80 (396)
Q Consensus 2 lv~~g~g~~~~~~~-~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g 80 (396)
|+|+|||+++.... ....+.+.++++||+++++.+|+++++||||+|||||+++++.|+++|++++.|+++|++||++|
T Consensus 21 Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGA~~g 100 (281)
T 1ldf_A 21 LIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCA 100 (281)
T ss_dssp HHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 56789998775432 22235667999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccccccccCC----C-----CCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCC-CCchh
Q psy16062 81 VGLVNIITPEEILFPVSS----A-----GLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKF-GDSVA 150 (396)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~-~~~~~ 150 (396)
++++|.+++++..+.... + ....+.+.+.|.++.+..++++.|+++||+|+++++.+.|+++... .+..|
T Consensus 101 a~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~~p 180 (281)
T 1ldf_A 101 AALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAP 180 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHCTTSSSCCGGGHH
T ss_pred HHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccchHH
Confidence 999999998754321100 0 1123456778888889999999999999999999999998877543 45899
Q ss_pred HHHHHHHHHHHHhccCCccCccchhhhhHHHHhhc-------ccc------ccchhhhhhHHHHHHHHHHHHHHhhcCCC
Q psy16062 151 IKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-------VWT------AHWIYWVAPILGSIVSTLLYKYVFSKDHD 217 (396)
Q Consensus 151 ~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~-------~~~------~~wvy~v~p~~Ga~la~~l~~~~~~~~~~ 217 (396)
+.||+++...++..+++||++||||||||||+++. .|+ |+||||++|++|+++++++|++++.++.+
T Consensus 181 l~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 181 LLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGGGC-
T ss_pred HHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCccCC
Confidence 99999999999999999999999999999999851 333 79999999999999999999999887654
Q ss_pred CCC
Q psy16062 218 GKN 220 (396)
Q Consensus 218 ~~~ 220 (396)
.++
T Consensus 261 ~~~ 263 (281)
T 1ldf_A 261 CDI 263 (281)
T ss_dssp ---
T ss_pred cch
Confidence 433
No 7
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=5e-48 Score=365.11 Aligned_cols=206 Identities=25% Similarity=0.483 Sum_probs=178.0
Q ss_pred EEEEeecceeccc-----c---CCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHH
Q psy16062 2 LMFFGCMSLVQGF-----S---QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQ 73 (396)
Q Consensus 2 lv~~g~g~~~~~~-----~---~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ 73 (396)
|+|+|||+++... + ....+++.++++||+++++.+|+++++||||+|||||+++++.|+++|++++.|+++|
T Consensus 24 lv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ 103 (271)
T 1j4n_A 24 FIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQ 103 (271)
T ss_dssp HHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 5778999877532 1 1112688999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHH
Q psy16062 74 VLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKF 153 (396)
Q Consensus 74 ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~i 153 (396)
++||++|++++|.++++... . ..+.+.+.++.+..++++.|+++||+|+++++.+.|+++....+..|+.|
T Consensus 104 ~lGa~~ga~l~~~~~~~~~~-------~--~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~~~~~~~pl~I 174 (271)
T 1j4n_A 104 CVGAIVATAILSGITSSLPD-------N--SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAI 174 (271)
T ss_dssp HHHHHHHHHHHHHHTTTCTT-------C--CTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSSCCCCCSCHHHHH
T ss_pred HHHHHHHHHHHHHHccCCcc-------c--ccccccCCCccchHHHHHHHHHHHHHHHHHHHhhccccCCCccccHHHHH
Confidence 99999999999999865321 0 11122334457788999999999999999999998887765556899999
Q ss_pred HHHHHHHHHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcCC
Q psy16062 154 ALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDH 216 (396)
Q Consensus 154 g~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~ 216 (396)
|+.+...+...+++||++||||||||||+++++|+++|+||++|++|+++++++|++++.++.
T Consensus 175 Gl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 175 GFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred HHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999998888888999999999999999999999999999999999999999999999987654
No 8
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=1.2e-46 Score=356.27 Aligned_cols=210 Identities=22% Similarity=0.380 Sum_probs=180.3
Q ss_pred EEEEeecceec-cc-------cCCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHH
Q psy16062 2 LMFFGCMSLVQ-GF-------SQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQ 73 (396)
Q Consensus 2 lv~~g~g~~~~-~~-------~~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ 73 (396)
|+|+|||++.. .. .....+++.++++||+++++++|+++++||||+|||||+++++.|+++|++++.|+++|
T Consensus 58 Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~YiiAQ 137 (279)
T 2w2e_A 58 FLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLARAIPPFRGILMAFTQ 137 (279)
T ss_dssp HHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 56788887432 11 11123678899999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHH
Q psy16062 74 VLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKF 153 (396)
Q Consensus 74 ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~i 153 (396)
++||++|++++|.++++... +.+.|.++.+..++++.|+++||+|+++++.+.+++++ ...+.|+.|
T Consensus 138 ~lGA~~ga~lv~~~~~~~~~------------~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~-~~~~~pl~I 204 (279)
T 2w2e_A 138 IVAGMAAAGAASAMTPGEIA------------FANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHR-ATWFAPFVI 204 (279)
T ss_dssp HHHHHHHHHHHHHHSCSSCC------------CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCST-TGGGHHHHH
T ss_pred HHHHHHHHHHHHHHccccce------------eeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCC-CcCcHHHHH
Confidence 99999999999999986542 34667777899999999999999999999998766553 235899999
Q ss_pred HHHHHHHHHhccCCccCccchhhhhHHHHhhccc-cccchhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q psy16062 154 ALVIALCSITVGPYTGASMNPARSLAPAIYSNVW-TAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQ 224 (396)
Q Consensus 154 g~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~-~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~ 224 (396)
|+++...++..+++||++||||||||||++++.| +++||||++|++|+++++++|++++..+.++.++.++
T Consensus 205 Gl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~~~~p~~d 276 (279)
T 2w2e_A 205 GIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQTTNPGQD 276 (279)
T ss_dssp HHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCSCC---
T ss_pred HHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCCCcCCCCCC
Confidence 9999999999999999999999999999998765 6899999999999999999999998877766555543
No 9
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=6.9e-47 Score=350.49 Aligned_cols=210 Identities=30% Similarity=0.473 Sum_probs=179.8
Q ss_pred EEEEeecceeccccC--CCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHH
Q psy16062 2 LMFFGCMSLVQGFSQ--TPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLI 79 (396)
Q Consensus 2 lv~~g~g~~~~~~~~--~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~ 79 (396)
|+|+|||++...... ...+++.++++||+++++.+|+++++||||+|||||+++++.||++|+|++.|+++|++||++
T Consensus 18 lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~aQ~lGa~~ 97 (234)
T 2o9g_A 18 LVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIV 97 (234)
T ss_dssp HHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 567889887544322 234788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccc-cccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHH
Q psy16062 80 GVGLVNIITPEEIL-FPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIA 158 (396)
Q Consensus 80 g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v~ 158 (396)
|+.++|.++++... +.+.+.....+.+.+.|. +.+..++++.|+++|++|+++++.+.|+|+. .+..|+.||+.+.
T Consensus 98 ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~-~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~--~~~~pl~IGl~v~ 174 (234)
T 2o9g_A 98 AAALLYLIASGKTGFDAAASGFASNGYGEHSPG-GYSMLSALVVELVLSAGFLLVIHGATDKFAP--AGFAPIAIGLACT 174 (234)
T ss_dssp HHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTT-CCCHHHHHHHHHHHHHHHHHHHHHHTSTTSC--TTCHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccccccccccccceeeecCCC-ccchHHHHHHHHHHHHHHHHHHHHhcCCCCc--cchHHHHHHHHHH
Confidence 99999999986431 111111223445667776 6799999999999999999999999886542 3589999999999
Q ss_pred HHHHhccCCccCccchhhhhHHHHhhccc--cccchhhhhhHHHHHHHHHHHHHHhhc
Q psy16062 159 LCSITVGPYTGASMNPARSLAPAIYSNVW--TAHWIYWVAPILGSIVSTLLYKYVFSK 214 (396)
Q Consensus 159 ~~~~~~~~~tG~~lNPAr~lg~~~~~~~~--~~~wvy~v~p~~Ga~la~~l~~~~~~~ 214 (396)
..++..+++||++||||||||||+++++| +++|+||++|++|+++++++|++++.+
T Consensus 175 ~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 175 LIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp HHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999998764 599999999999999999999998754
No 10
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2.2e-46 Score=349.32 Aligned_cols=207 Identities=29% Similarity=0.446 Sum_probs=177.8
Q ss_pred EEEEeecceecccc--CCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHH
Q psy16062 2 LMFFGCMSLVQGFS--QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLI 79 (396)
Q Consensus 2 lv~~g~g~~~~~~~--~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~ 79 (396)
|+|+|||+++.... ....+++.++++||+++++.+|+++++||||+|||||+++++.|+++|++++.|+++|++||++
T Consensus 43 Lv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~YiiAQ~lGA~~ 122 (256)
T 3llq_A 43 LVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIV 122 (256)
T ss_dssp HHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 57789998764432 2234789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHHH
Q psy16062 80 GVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIAL 159 (396)
Q Consensus 80 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v~~ 159 (396)
|++++|.++++.... +.......+.+.+.|. +.+..++++.|+++||+|+++++.+.|+|+. ....|+.||+++..
T Consensus 123 ga~lv~~~~~~~~~~-~~~~~~~~~~~~t~p~-~~s~~~~f~~E~i~Tf~Lv~~il~~~d~~~~--~~~~pl~IGl~v~~ 198 (256)
T 3llq_A 123 AAAALYVIATGKAGI-DLGGFASNGYGEHSPG-GYSLVSALLIEIILTAFFLIVILGSTHGRVP--AGFAPIAIGLALTL 198 (256)
T ss_dssp HHHHHHHHHTTBTTC-CCTTTTCCCCGGGSTT-CCCHHHHHHHHHHHHHHHHHHHHHHHSTTSC--TTCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcccc-cccccccccccccCCc-ccCHHHHHHHHHHHHHHHHHHHHHhcCCCCC--ccchhHHHHHHHHH
Confidence 999999998653211 1111223345566775 6789999999999999999999999887653 35899999999999
Q ss_pred HHHhccCCccCccchhhhhHHHHhhcc--ccccchhhhhhHHHHHHHHHHHHHHh
Q psy16062 160 CSITVGPYTGASMNPARSLAPAIYSNV--WTAHWIYWVAPILGSIVSTLLYKYVF 212 (396)
Q Consensus 160 ~~~~~~~~tG~~lNPAr~lg~~~~~~~--~~~~wvy~v~p~~Ga~la~~l~~~~~ 212 (396)
..+..+++||++||||||||||++.++ |+++||||++|++|+++++++|+++.
T Consensus 199 i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 199 IHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp HHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999875 56899999999999999999999874
No 11
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=6.4e-47 Score=361.17 Aligned_cols=206 Identities=24% Similarity=0.456 Sum_probs=180.0
Q ss_pred EEEEeecceecccc----CCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhH
Q psy16062 2 LMFFGCMSLVQGFS----QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGC 77 (396)
Q Consensus 2 lv~~g~g~~~~~~~----~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa 77 (396)
|+|+|||+++.... ....+++.++++||+++++++|+++++||||+|||||+++++.|+++|++++.|+++|++||
T Consensus 74 Lv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~~~~~~~YiiAQ~lGA 153 (304)
T 3cn5_A 74 FLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGA 153 (304)
T ss_dssp HHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 57789998876431 12347889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC----chhHHH
Q psy16062 78 LIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGD----SVAIKF 153 (396)
Q Consensus 78 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~----~~~~~i 153 (396)
++|++++|.++++.+... +.+.+.+.++.+..++++.|+++||+|+++++..+|+++..... +.|+.|
T Consensus 154 i~Ga~lv~~~~~~~~~~~--------~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~~~~~~~lapl~I 225 (304)
T 3cn5_A 154 ICGVGLVKAFMKGPYNQF--------GGGANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPI 225 (304)
T ss_dssp HHHHHHHHHHCHHHHHHT--------TTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEEESTTSCCEEECHHHH
T ss_pred HHHHHHHHHHhhhhhhhc--------cCcccccCCCccHHHHHHHHHHHHHHHHHHHhheecCccCCCCcccccchHHHH
Confidence 999999999998764311 11223355678999999999999999999999888876644333 899999
Q ss_pred HHHHHHHHHhccCCccCccchhhhhHHHHh---hccccccchhhhhhHHHHHHHHHHHHHHhhcC
Q psy16062 154 ALVIALCSITVGPYTGASMNPARSLAPAIY---SNVWTAHWIYWVAPILGSIVSTLLYKYVFSKD 215 (396)
Q Consensus 154 g~~v~~~~~~~~~~tG~~lNPAr~lg~~~~---~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~ 215 (396)
|+++...+++.+++||++||||||||||++ .++|+++|+||++|++|+++++++|++++.++
T Consensus 226 Gl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 226 GFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp HHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999998 67899999999999999999999999987654
No 12
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=4.5e-46 Score=349.87 Aligned_cols=211 Identities=26% Similarity=0.321 Sum_probs=175.9
Q ss_pred EEEEeecceeccccC-CCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHH
Q psy16062 2 LMFFGCMSLVQGFSQ-TPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIG 80 (396)
Q Consensus 2 lv~~g~g~~~~~~~~-~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g 80 (396)
|+|+|||++++...+ ...+++.++++||+++++.+|+++++||||+|||||+++++.|+++|++++.|+++|++||++|
T Consensus 23 lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~g 102 (258)
T 3c02_A 23 LMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVG 102 (258)
T ss_dssp HHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 567899988754322 2347889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCC-CCCCch-hHHHHHHHH
Q psy16062 81 VGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNA-KFGDSV-AIKFALVIA 158 (396)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~-~~~~~~-~~~ig~~v~ 158 (396)
++++|.+++++..+.. ++... .........+..++++.|+++||+|+++++.++|+||+ ...+.. |+.||+++.
T Consensus 103 a~l~~~~~~~~~~~~~-~~~~~---~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~~~~~~~pl~IGl~v~ 178 (258)
T 3c02_A 103 TSTVYGLYHGFISNSK-IPQFA---WETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVVGLIIL 178 (258)
T ss_dssp HHHHHHHTHHHHHTTC-SCTTC---SSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcchhhhhcc-ccccc---cccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCCcccccHHHHHHHHHHH
Confidence 9999999987654211 11100 01112223456679999999999999999999887764 233477 999999999
Q ss_pred HHHHhccCCccCccchhhhhHHHHhhc------cc----cccchhhhhhHHHHHHHHHHHHHHhhcCC
Q psy16062 159 LCSITVGPYTGASMNPARSLAPAIYSN------VW----TAHWIYWVAPILGSIVSTLLYKYVFSKDH 216 (396)
Q Consensus 159 ~~~~~~~~~tG~~lNPAr~lg~~~~~~------~~----~~~wvy~v~p~~Ga~la~~l~~~~~~~~~ 216 (396)
..++..+++||++||||||||||++++ +| +|+||||++|++|+++++++|++++.++.
T Consensus 179 ~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~~ 246 (258)
T 3c02_A 179 CIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPLV 246 (258)
T ss_dssp HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhcccC
Confidence 999999999999999999999999863 35 67999999999999999999999887654
No 13
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=9.5e-45 Score=338.98 Aligned_cols=204 Identities=31% Similarity=0.491 Sum_probs=176.2
Q ss_pred EEEEeecceeccc---cC---------------CCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCCh
Q psy16062 2 LMFFGCMSLVQGF---SQ---------------TPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITM 63 (396)
Q Consensus 2 lv~~g~g~~~~~~---~~---------------~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~ 63 (396)
|+|+|||+++... ++ ...+++.++++||+++++.+|+++++||||+|||||+++++.||++|
T Consensus 18 lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~NPAVTla~~~~g~~~~ 97 (246)
T 2f2b_A 18 LVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPG 97 (246)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCG
T ss_pred HHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeCHHHHHHHHHhCCCCH
Confidence 5678888877542 10 11245669999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q psy16062 64 VELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNA 143 (396)
Q Consensus 64 ~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~ 143 (396)
+|++.|+++|++||++|+.++|.+++++.. ...+.+.+.|.++.+..++++.|+++|++|+++++...++++.
T Consensus 98 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~-------~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~ 170 (246)
T 2f2b_A 98 REVVPYIIAQLLGAAFGSFIFLQCAGIGAA-------TVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERA 170 (246)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHCTHHH-------HTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCccch-------hcceeeeccCccccchHHHHHHHHHHHHHHHheeeEEecCCCC
Confidence 999999999999999999999999987321 1235567788778899999999999999999999987655443
Q ss_pred CCCCchhHHHHHHHHHHHHhccCCccCccchhhhhHHHH--hh----ccccccchhhhhhHHHHHHHHHHHHHHhh
Q psy16062 144 KFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAI--YS----NVWTAHWIYWVAPILGSIVSTLLYKYVFS 213 (396)
Q Consensus 144 ~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~--~~----~~~~~~wvy~v~p~~Ga~la~~l~~~~~~ 213 (396)
. .+..|+.+|+.+...++..+++||+++|||||||||+ .. ++|++.|+||++|++|+++++++|+++++
T Consensus 171 ~-~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 171 P-KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp C-TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred C-CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 3 4589999999999999999999999999999999999 33 36888999999999999999999998864
No 14
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.97 E-value=4.5e-31 Score=246.03 Aligned_cols=149 Identities=30% Similarity=0.394 Sum_probs=121.5
Q ss_pred hhHHHHHhhhhhHHHHHHHHHHhhhhhcccc--CCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcccc
Q psy16062 246 AVKLLELCLGEVLGTSMLMFFGCMSLVQGFS--QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMIT 323 (396)
Q Consensus 246 ~~~~~~~~~~Ef~gT~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~~ 323 (396)
+++++|++++||+||++|+++++|+...... ....+.+.++++||+++++.++++|++||+|+|||||+++++.|+++
T Consensus 26 ~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~ 105 (256)
T 3llq_A 26 SYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFP 105 (256)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCC
Confidence 3578999999999999999999998654322 12234577899999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhHHHHHHHHhhhhhCcccccccCCCCCccceEEecCCCCCCChHHHHHHHHHHHHHHhHhhC
Q psy16062 324 MLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC 396 (396)
Q Consensus 324 ~~~~~~yi~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~~~v~ 396 (396)
|++.+.|+++|++||++|+.+++.++++......+ .....++++++|. ..|..++++.|+++|++|+++|+
T Consensus 106 ~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~-~~~~~~~~~t~p~-~~s~~~~f~~E~i~Tf~Lv~~il 176 (256)
T 3llq_A 106 ASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLG-GFASNGYGEHSPG-GYSLVSALLIEIILTAFFLIVIL 176 (256)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCT-TTTCCCCGGGSTT-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccc-ccccccccccCCc-ccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988643211111 1123345567886 46999999999999999999874
No 15
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.97 E-value=2.5e-30 Score=244.50 Aligned_cols=140 Identities=21% Similarity=0.324 Sum_probs=119.3
Q ss_pred hhhHHHHHhhhhhHHHHHHHHHHhhhhhc-cccC-------CCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHH
Q psy16062 245 RAVKLLELCLGEVLGTSMLMFFGCMSLVQ-GFSQ-------TPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSA 316 (396)
Q Consensus 245 ~~~~~~~~~~~Ef~gT~~l~~~~~~~~~~-~~~~-------~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~ 316 (396)
+.++.+|++++||+||++|+++++++... .... .+.+.+.++++||+++++.++++|++||||+|||||+++
T Consensus 40 ~~~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~ 119 (279)
T 2w2e_A 40 SVRNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLAL 119 (279)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHH
Confidence 34577899999999999999999986321 1110 111245689999999999999999999999999999999
Q ss_pred HHhcccchhhHHHHHHHHhHHHHHHHHhhhhhCcccccccCCCCCccceEEecCCCCCCChHHHHHHHHHHHHHHhHhhC
Q psy16062 317 FLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC 396 (396)
Q Consensus 317 ~~~~~~~~~~~~~yi~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~~~v~ 396 (396)
++.|+++|++++.|+++|++||++|+++++.+++++.. +.|.|.++.+..++++.|+++||+|+++|+
T Consensus 120 ~~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~------------~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il 187 (279)
T 2w2e_A 120 VLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA------------FANALGGGASRTRGLFLEAFGTAILCLTVL 187 (279)
T ss_dssp HHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCC------------CSCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccce------------eeccCCccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999876542 235777778999999999999999999875
No 16
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.97 E-value=2.9e-30 Score=246.21 Aligned_cols=146 Identities=21% Similarity=0.333 Sum_probs=123.6
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHHHhhhhhcccc----CCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHH
Q psy16062 243 GKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFS----QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFL 318 (396)
Q Consensus 243 ~~~~~~~~~~~~~Ef~gT~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~ 318 (396)
+.++++++|++++||+||++|+|+++++.++... ....+.+.++++||+++++.+++++++||||+|||||+++++
T Consensus 54 e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l 133 (304)
T 3cn5_A 54 ELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFL 133 (304)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHH
Confidence 4456789999999999999999999998765321 122335678999999999999999999999999999999999
Q ss_pred hcccchhhHHHHHHHHhHHHHHHHHhhhhhCcccccccCCCCCccceEEecCCCCCCChHHHHHHHHHHHHHHhHhhC
Q psy16062 319 LEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC 396 (396)
Q Consensus 319 ~~~~~~~~~~~yi~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~~~v~ 396 (396)
.|+++|++++.|+++|++||++|++++|.++++++....+. .+.+.++.+..++++.|+++||+|+++|+
T Consensus 134 ~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g--------~~~~~~~~s~~~~f~~E~i~TfiLv~~Il 203 (304)
T 3cn5_A 134 ARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGG--------ANSVALGYNKGTALGAEIIGTFVLVYTVF 203 (304)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTT--------CCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCc--------ccccCCCccHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998765432211 12355678999999999999999999985
No 17
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.97 E-value=4.1e-30 Score=236.14 Aligned_cols=140 Identities=29% Similarity=0.502 Sum_probs=120.7
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhhhcccc---CCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcccch
Q psy16062 248 KLLELCLGEVLGTSMLMFFGCMSLVQGFS---QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITM 324 (396)
Q Consensus 248 ~~~~~~~~Ef~gT~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~~~ 324 (396)
+++|++++||+||++|+++++|+.++... .++.+.+.++++||+++++.+++++++||+|+|||||+++++.|+++|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 57899999999999999999998765321 122345778999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhHHHHHHHHhhhhhCcccccccCCCCCccceEEecCCCCCCChHHHHHHHHHHHHHHhHhhC
Q psy16062 325 LELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC 396 (396)
Q Consensus 325 ~~~~~yi~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~~~v~ 396 (396)
+|.+.|+++|++|+++|+.++|.+++++..... ..+.+++++|..|+++.|+++|++|+++|+
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~l---------g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~ 144 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL---------GVTMVHGNLTAGHGLLVELIITFQLVFTIF 144 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTT---------TCCCCCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccce---------eeccCCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887643211 124566678999999999999999999874
No 18
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.97 E-value=4.1e-30 Score=246.50 Aligned_cols=142 Identities=30% Similarity=0.510 Sum_probs=123.1
Q ss_pred hhHHHHHhhhhhHHHHHHHHHHhhhhhcccc---CCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhccc
Q psy16062 246 AVKLLELCLGEVLGTSMLMFFGCMSLVQGFS---QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMI 322 (396)
Q Consensus 246 ~~~~~~~~~~Ef~gT~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~ 322 (396)
+++++|++++||+|||+|+|+++|+.++... ..+.+.+.++++||+++++.++++|++||||+|||||+++++.|++
T Consensus 48 ~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~ 127 (340)
T 3iyz_A 48 TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKI 127 (340)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCC
Confidence 4678999999999999999999998765321 1223457789999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHhHHHHHHHHhhhhhCcccccccCCCCCccceEEecCCCCCCChHHHHHHHHHHHHHHhHhhC
Q psy16062 323 TMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC 396 (396)
Q Consensus 323 ~~~~~~~yi~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~~~v~ 396 (396)
+|++++.|+++|++||++|+++++.+++++... .+..+.+.++++..++++.|+++||+|+++||
T Consensus 128 ~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~---------~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il 192 (340)
T 3iyz_A 128 SIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG---------GLGVTTVHGNLTAGHGLLVELIITFQLVFTIF 192 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcC---------ceeeccCCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998765321 23345666778999999999999999999985
No 19
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.96 E-value=2.3e-29 Score=239.51 Aligned_cols=142 Identities=29% Similarity=0.491 Sum_probs=121.8
Q ss_pred hhHHHHHhhhhhHHHHHHHHHHhhhhhccccC---CCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhccc
Q psy16062 246 AVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQ---TPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMI 322 (396)
Q Consensus 246 ~~~~~~~~~~Ef~gT~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~ 322 (396)
+++++|++++||+|||+|+++++|+.++.... .+.+.+.++++||+++++.+++++++||||+|||||+++++.|++
T Consensus 9 ~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~ 88 (301)
T 2zz9_A 9 TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKI 88 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCC
Confidence 45789999999999999999999987653321 123446789999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHhHHHHHHHHhhhhhCcccccccCCCCCccceEEecCCCCCCChHHHHHHHHHHHHHHhHhhC
Q psy16062 323 TMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC 396 (396)
Q Consensus 323 ~~~~~~~yi~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~~~v~ 396 (396)
+|++++.|+++|++||++|++++|.+++++.... ...+.|.++.+..++++.|+++||+|+++||
T Consensus 89 ~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~---------~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il 153 (301)
T 2zz9_A 89 SIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGG---------LGVTTVHGNLTAGHGLLVELIITFQLVFTIF 153 (301)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGT---------SSCCCCCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCc---------eeeecCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998754321 1124556678999999999999999999985
No 20
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.96 E-value=5.9e-29 Score=232.09 Aligned_cols=216 Identities=22% Similarity=0.346 Sum_probs=168.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhcc------C-C------CCCC---CC-----chhHHHHHHHHHHHHhccCCccCccc
Q psy16062 115 TTVQAFLAEFFSTSLLVFTCCGVWD------S-R------NAKF---GD-----SVAIKFALVIALCSITVGPYTGASMN 173 (396)
Q Consensus 115 ~~~~~~~~E~~~T~~lv~~il~~~~------~-~------~~~~---~~-----~~~~~ig~~v~~~~~~~~~~tG~~lN 173 (396)
+..|.++.|+++|++|++....... + + +... .+ ..++..|+.+.+.+++.+++||+++|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 5788999999999999998764321 0 0 0010 01 27788999999999999999999999
Q ss_pred hhhhhHHHHhhc-cccccchhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCCccchhhHHHHH
Q psy16062 174 PARSLAPAIYSN-VWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLEL 252 (396)
Q Consensus 174 PAr~lg~~~~~~-~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~~~~~ 252 (396)
||.+++..+..+ .|.....|+++|++|+++++.+-+.+++++. . ...+++.+.++. ..+.++.
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~------~--~~~~~~~t~p~~--------~~~~~~~ 146 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGA------A--TVGGLGATAPFP--------GISYWQA 146 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHH------H--HTTGGGCCCCCT--------TCCHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------h--hcceeeeccCcc--------ccchHHH
Confidence 999999998765 7899999999999999999999988886521 0 112233322211 1246789
Q ss_pred hhhhhHHHHHHHHHHhhhhhccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHH-----hcccchhhH
Q psy16062 253 CLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFL-----LEMITMLEL 327 (396)
Q Consensus 253 ~~~Ef~gT~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~-----~~~~~~~~~ 327 (396)
++.|+++|++|++.+++.... ++.+ ....++.+|+.+....++.+++||+|+|||+|+++++ .++..|.+.
T Consensus 147 ~~~E~i~Tf~Lv~~i~~~~~~--~~~~--~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~ 222 (246)
T 2f2b_A 147 MLAEVVGTFLLMITIMGIAVD--ERAP--KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYY 222 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHTTS--TTSC--TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGT
T ss_pred HHHHHHHHHHHHheeeEEecC--CCCC--CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceE
Confidence 999999999999999875321 1111 2235889999999999999999999999999999999 335678999
Q ss_pred HHHHHHHhHHHHHHHHhhhhhCc
Q psy16062 328 VLYVCSQVLGCLIGVGLVNIITP 350 (396)
Q Consensus 328 ~~yi~aQ~~Ga~~~~~~~~~~~~ 350 (396)
++||++|++|+++|+++.+.+.+
T Consensus 223 ~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 223 SIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEeeeHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999887653
No 21
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.96 E-value=4.4e-28 Score=227.83 Aligned_cols=216 Identities=22% Similarity=0.216 Sum_probs=171.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC--chhHHHHHHHHHHHHhccCCccCccchhhhhHHHHhhc-cccccc
Q psy16062 115 TTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VWTAHW 191 (396)
Q Consensus 115 ~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~-~~~~~w 191 (396)
+..+.++.|+++|++|+++.+......+....+ ..++.+|+++.+.++..+++||+++|||++++.++..+ .|...|
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~ 87 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAI 87 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHH
Confidence 568899999999999999998876432222222 46788999999999999999999999999999998765 789999
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCCccchhhHHHHHhhhhhHHHHHHHHHHhhhh
Q psy16062 192 IYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSL 271 (396)
Q Consensus 192 vy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~~~~~~~~Ef~gT~~l~~~~~~~~ 271 (396)
+||++|++|+++++.+.+.+++++.+. ..+.+...+ ..+..+.++.|+++||+|++..++..
T Consensus 88 ~Yi~AQ~lGa~~ga~l~~~~~~~~~~~--------~~~~~~~~~----------~~s~~~~~~~E~i~Tf~Lv~~il~~~ 149 (263)
T 2b6o_A 88 CYVVAQLLGAVAGAAVLYSVTPPAVRG--------NLALNTLHP----------GVSVGQATIVEIFLTLQFVLCIFATY 149 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTTCS--------SCSCCCCCT----------TCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccc--------ccccccCCc----------cccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988543211 111111111 11357789999999999999998652
Q ss_pred hccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcccchhhHHHHHHHHhHHHHHHHHhhhhhCcc
Q psy16062 272 VQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPE 351 (396)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~~~~~~~~yi~aQ~~Ga~~~~~~~~~~~~~ 351 (396)
+..+... .-..++.+|+.+.......++.||+.+|||++++.++... .|.+.|+||++|++|+++|+++.+.+..+
T Consensus 150 --d~~~~~~-~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~ 225 (263)
T 2b6o_A 150 --DERRNGR-LGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR-NFTNHWVYWVGPVIGAGLGSLLYDFLLFP 225 (263)
T ss_dssp --CTTSCSS-CCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT-CCTTCTHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred --cccCCCC-cccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC-CccceeHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1111111 1235788999999999999999999999999999999876 78999999999999999999999887654
Q ss_pred c
Q psy16062 352 E 352 (396)
Q Consensus 352 ~ 352 (396)
+
T Consensus 226 ~ 226 (263)
T 2b6o_A 226 R 226 (263)
T ss_dssp C
T ss_pred c
Confidence 3
No 22
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.96 E-value=4.6e-30 Score=243.82 Aligned_cols=150 Identities=26% Similarity=0.382 Sum_probs=125.1
Q ss_pred hHHHHHhhhhhHHHHHHHHHHhhhhhccc-cCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcccchh
Q psy16062 247 VKLLELCLGEVLGTSMLMFFGCMSLVQGF-SQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITML 325 (396)
Q Consensus 247 ~~~~~~~~~Ef~gT~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~~~~ 325 (396)
++++|++++||+||++|+++++++..+.. +..+.+.+.++++||+++++.+++++++||+|+|||||+++++.|+++|+
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 84 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKR 84 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHH
Confidence 35789999999999999999998865432 22233445689999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHhhhhhCcccccccCC------CC---CccceEEecCCCCCCChHHHHHHHHHHHHHHhHhhC
Q psy16062 326 ELVLYVCSQVLGCLIGVGLVNIITPEEILFPVG------SA---GLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC 396 (396)
Q Consensus 326 ~~~~yi~aQ~~Ga~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~~~v~ 396 (396)
+.+.|+++|++||++|+.++|.++++++.+... ++ ....+++.|+|.++.+..++++.|+++|++|+++|+
T Consensus 85 ~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il 164 (281)
T 1ldf_A 85 KVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLIL 164 (281)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999876432110 00 112345678898888999999999999999999885
No 23
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.96 E-value=3e-29 Score=235.77 Aligned_cols=142 Identities=25% Similarity=0.419 Sum_probs=122.7
Q ss_pred hhhHHHHHhhhhhHHHHHHHHHHhhhhhccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcccch
Q psy16062 245 RAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITM 324 (396)
Q Consensus 245 ~~~~~~~~~~~Ef~gT~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~~~ 324 (396)
++++++|++++||+||++|+++++++..+. +..+.+.+.++++||+++++.+++++++||+|+|||||+++++.|+++|
T Consensus 7 ~~~~~~r~~laEfiGT~~lv~~g~g~~~~~-~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 85 (266)
T 3d9s_A 7 CSVAFLKAVFAEFLATLIFVFFGLGSALKW-PSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISL 85 (266)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHSCC-SSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCH
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCH
Confidence 446789999999999999999999987542 2223355778999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhHHHHHHHHhhhhhCcccccccCCCCCccceEEecCCCCCCChHHHHHHHHHHHHHHhHhhC
Q psy16062 325 LELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC 396 (396)
Q Consensus 325 ~~~~~yi~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~~~v~ 396 (396)
++.+.|+++|++||++|+.+++.+++++.... .+.+.|.++.+..|+++.|+++|++|+++|+
T Consensus 86 ~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~---------~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il 148 (266)
T 3d9s_A 86 LRAFFYVAAQLVGAIAGAGILYGVAPLNARGN---------LAVNALNNNTTQGQAMVVELILTFQLALCIF 148 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTT---------TTCCCCCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccccCc---------eeeccCCccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999997654221 1234566678999999999999999999885
No 24
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.96 E-value=6.2e-29 Score=234.61 Aligned_cols=144 Identities=23% Similarity=0.338 Sum_probs=119.1
Q ss_pred chhhHHHHHhhhhhHHHHHHHHHHhhhhhcccc----CC----CCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHH
Q psy16062 244 KRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFS----QT----PIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVS 315 (396)
Q Consensus 244 ~~~~~~~~~~~~Ef~gT~~l~~~~~~~~~~~~~----~~----~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~ 315 (396)
.++++++|++++||+||++|+|+++|+.++... .. ..+.+.++++||+++++.++++|++||||+|||||++
T Consensus 5 ~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla 84 (271)
T 1j4n_A 5 FKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLG 84 (271)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHH
Confidence 345678999999999999999999998764321 11 1134678999999999999999999999999999999
Q ss_pred HHHhcccchhhHHHHHHHHhHHHHHHHHhhhhhCcccccccCCCCCccceEEecCCCCCCChHHHHHHHHHHHHHHhHhh
Q psy16062 316 AFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTC 395 (396)
Q Consensus 316 ~~~~~~~~~~~~~~yi~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~~~v 395 (396)
+++.|+++|++.+.|+++|++||++|+.+++.++++......+ .+.+.++++..++++.|+++|++|+++|
T Consensus 85 ~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g---------~~~~~~~~~~~~~~~~E~i~T~~Lv~~i 155 (271)
T 1j4n_A 85 LLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLG---------LNALAPGVNSGQGLGIEIIGTLQLVLCV 155 (271)
T ss_dssp HHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTT---------CCCCCTTCCTTGGGHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccc---------cccCCCccchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998653221111 1223445788999999999999999987
Q ss_pred C
Q psy16062 396 C 396 (396)
Q Consensus 396 ~ 396 (396)
+
T Consensus 156 ~ 156 (271)
T 1j4n_A 156 L 156 (271)
T ss_dssp H
T ss_pred H
Confidence 5
No 25
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.95 E-value=3.2e-27 Score=218.53 Aligned_cols=223 Identities=17% Similarity=0.211 Sum_probs=170.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCCC-C--chhHHHHHHHHHHHHhccCCccCccchhhhhHHHHhhc-ccc
Q psy16062 115 TTVQAFLAEFFSTSLLVFTCCGVWD--SRNAKFG-D--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VWT 188 (396)
Q Consensus 115 ~~~~~~~~E~~~T~~lv~~il~~~~--~~~~~~~-~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~-~~~ 188 (396)
+..|.++.|+++|++|++....... ++.+... + ..++..|+.+.+.+++.+++||+++|||.+++..+..+ .|.
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 82 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAK 82 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHH
Confidence 3678899999999999998765431 1111111 2 46788999999999999999999999999999998765 788
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCCccchhhHHHHHhhhhhHHHHHHHHHHh
Q psy16062 189 AHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGC 268 (396)
Q Consensus 189 ~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~~~~~~~~Ef~gT~~l~~~~~ 268 (396)
....|+++|++|+++++.+.+.++++..+-+..++.....+.+.+.+. ..+..+.++.|+++|++|++..+
T Consensus 83 ~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~---------~~~~~~~~~~E~i~T~~Lv~~i~ 153 (234)
T 2o9g_A 83 EVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPG---------GYSMLSALVVELVLSAGFLLVIH 153 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTT---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCC---------ccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988887644211110000012222222221 12467889999999999999988
Q ss_pred hhhhccccCCCCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhcc-cchhhHHHHHHHHhHHHHHHHHhhhh
Q psy16062 269 MSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEM-ITMLELVLYVCSQVLGCLIGVGLVNI 347 (396)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~-~~~~~~~~yi~aQ~~Ga~~~~~~~~~ 347 (396)
+.. + ++.+ ....++.+|+.+.......++.||+.+|||++++.++..+ ..|.+.|+||++|++|+++|+++.+.
T Consensus 154 ~~~--d-~~~~--~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~ 228 (234)
T 2o9g_A 154 GAT--D-KFAP--AGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRT 228 (234)
T ss_dssp HHT--S-TTSC--TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hhc--C-CCCc--cchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHH
Confidence 643 1 1112 2235889999999999999999999999999999999853 46779999999999999999999887
Q ss_pred hCcc
Q psy16062 348 ITPE 351 (396)
Q Consensus 348 ~~~~ 351 (396)
+..+
T Consensus 229 ~~~~ 232 (234)
T 2o9g_A 229 LLEK 232 (234)
T ss_dssp HTSC
T ss_pred HcCC
Confidence 7543
No 26
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.94 E-value=1.1e-26 Score=217.95 Aligned_cols=224 Identities=18% Similarity=0.255 Sum_probs=167.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhccC--CCCCCCC--chhHHHHHHHHHHHHhccCCccCccchhhhhHHHHhhc-ccc
Q psy16062 114 LTTVQAFLAEFFSTSLLVFTCCGVWDS--RNAKFGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VWT 188 (396)
Q Consensus 114 ~~~~~~~~~E~~~T~~lv~~il~~~~~--~~~~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~-~~~ 188 (396)
.+..|.++.|+++|++|++........ +.+...+ ...+..|+.+.+.+++.+++||+++|||.+++..+..+ .|.
T Consensus 7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 86 (258)
T 3c02_A 7 KSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLK 86 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHH
Confidence 367889999999999999986643211 1111122 46778899999999999999999999999999998765 799
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccccCCCCCCCccchhhHHHHHhhhhhHHHHHHHHHHh
Q psy16062 189 AHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGC 268 (396)
Q Consensus 189 ~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~~~~~~~~Ef~gT~~l~~~~~ 268 (396)
....|+++|++|+++++.+-+.+++++.++.+++..+...+++.+ ....+.++.|+++||+|++..+
T Consensus 87 ~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t-------------~p~~~~~~~E~i~Tf~Lv~~i~ 153 (258)
T 3c02_A 87 KIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPS-------------ISLTGAFFNELILTGILLLVIL 153 (258)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTT-------------SCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCC-------------CchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988888765432221111011122211 1123489999999999999998
Q ss_pred hhhhccccCC-CCCCchhHHHHHHHHHHHHHHHhcCCccccChHhHHHHHHhccc-----ch----hhHHHHHHHHhHHH
Q psy16062 269 MSLVQGFSQT-PIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMI-----TM----LELVLYVCSQVLGC 338 (396)
Q Consensus 269 ~~~~~~~~~~-~~~~~~~~~~~g~~v~~~i~~~~~iSG~hlNPAvTl~~~~~~~~-----~~----~~~~~yi~aQ~~Ga 338 (396)
+.. +.++. ..+...+++.+|+.+.....+.++.||+.+|||++++.++...+ .| .+.|+||++|++|+
T Consensus 154 ~~~--d~~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga 231 (258)
T 3c02_A 154 VVV--DENICGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGS 231 (258)
T ss_dssp HHH--CHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHH
T ss_pred HHh--CcccCCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHH
Confidence 653 11111 11222228889999999999999999999999999999998632 34 45899999999999
Q ss_pred HHHHHhhhhhCccc
Q psy16062 339 LIGVGLVNIITPEE 352 (396)
Q Consensus 339 ~~~~~~~~~~~~~~ 352 (396)
++|+++.+.+..++
T Consensus 232 ~la~~~y~~~~~~~ 245 (258)
T 3c02_A 232 VVFCQFYDKVICPL 245 (258)
T ss_dssp HHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHhccc
Confidence 99999988776543
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=61.04 E-value=62 Score=29.78 Aligned_cols=112 Identities=12% Similarity=0.075 Sum_probs=61.9
Q ss_pred chHHHHHHHHHHHHHHHHHhcc-CccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHHHHHHHHhcc--cccccccC
Q psy16062 21 SMQPGLMFGFVVSTVICIFGHI-SGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITP--EEILFPVS 97 (396)
Q Consensus 21 ~~~~a~~~g~~~~~~i~~~~~i-SGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~--~~~~~~~~ 97 (396)
.+..++.+.+++...+..=+.. +| |--.+ ...+.||+++++.+--+.-=.+|=++|+.++-.+.. ...... .
T Consensus 68 ~ll~g~~F~vGL~lVvl~G~ELFTg---n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~-~ 142 (285)
T 3kcu_A 68 KLVGGICFSLGLILCVVCGADLFTS---TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTA-N 142 (285)
T ss_dssp HHHHHHHHTHHHHHHHHHTCCCTTT---THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTT-T
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc---chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccC-c
Confidence 3456777777777776655443 33 42233 345689999988776666555666666555444421 111000 0
Q ss_pred CC--CCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhcc
Q psy16062 98 SA--GLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWD 139 (396)
Q Consensus 98 ~~--~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~ 139 (396)
+. +........ ..+.+..+.|+-=+++-++.++.+.....
T Consensus 143 ~~~~~~~~~ia~~--K~~~~~~~~f~~GIlcN~lVclaVw~~~~ 184 (285)
T 3kcu_A 143 GQWGLNVLQTADH--KVHHTFIEAVCLGILANLMVCLAVWMSYS 184 (285)
T ss_dssp THHHHHHHHHHHH--TTCSCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHH--HhCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 000001111 12457888888888888888888876543
No 28
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=42.63 E-value=2.9 Score=39.96 Aligned_cols=22 Identities=14% Similarity=0.250 Sum_probs=18.0
Q ss_pred HhcCCccccChHhHHHHHHhcc
Q psy16062 300 FGHISGAHLNPSVSVSAFLLEM 321 (396)
Q Consensus 300 ~~~iSG~hlNPAvTl~~~~~~~ 321 (396)
.+.-||||++||++++-.+..+
T Consensus 8 ~~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 8 MAGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp ECCSSHHHHHHHHHHHHHHHHT
T ss_pred EcCCCHHHHHHHHHHHHHHHhC
Confidence 3455899999999999988754
No 29
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=32.93 E-value=10 Score=36.03 Aligned_cols=21 Identities=14% Similarity=0.237 Sum_probs=17.5
Q ss_pred hccCccccChHHHHHHHHhcC
Q psy16062 40 GHISGAHLNPSVSVSAFLLEM 60 (396)
Q Consensus 40 ~~iSGaH~NPaVTla~~l~g~ 60 (396)
+.-||||++||++++-.+..+
T Consensus 9 ~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 9 AGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhC
Confidence 344789999999999998765
No 30
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=28.05 E-value=1.1e+02 Score=28.21 Aligned_cols=103 Identities=14% Similarity=0.059 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHHHHHhcC-CccccChHhHHHHHHhcccchhhHHHHH----HHHhHHHHHHHHhhhhhCcccccccCCC
Q psy16062 285 PGLMFGFVVSTVICIFGHI-SGAHLNPSVSVSAFLLEMITMLELVLYV----CSQVLGCLIGVGLVNIITPEEILFPVGS 359 (396)
Q Consensus 285 ~~~~~g~~v~~~i~~~~~i-SG~hlNPAvTl~~~~~~~~~~~~~~~yi----~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~ 359 (396)
.++.+.+++..++..-+.. +| |=-.++ ..+.+|.+|++.+--| ++-++|+++-+.+++........ .+.
T Consensus 71 ~g~~F~vGL~lVvl~G~ELFTg---n~l~~~-a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~--~~~ 144 (285)
T 3kcu_A 71 GGICFSLGLILCVVCGADLFTS---TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTA--NGQ 144 (285)
T ss_dssp HHHHHTHHHHHHHHHTCCCTTT---THHHHH-HHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTT--TTH
T ss_pred HHHHHHHHHHHHHHhCcccccc---chHHHH-HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccC--chH
Confidence 3566666666666655544 55 422333 3567888887655333 55666666555554322111000 000
Q ss_pred -CCccceEEecCCCCCCChHHHHHHHHHHHHHHhHhh
Q psy16062 360 -AGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTC 395 (396)
Q Consensus 360 -~~~~~~~~~~~p~~~~s~~~~~~~E~~~t~~L~~~v 395 (396)
.+....+.... .+.+..+.|+-=+.|-.+..+.|
T Consensus 145 ~~~~~~~ia~~K--~~~~~~~~f~~GIlcN~lVclaV 179 (285)
T 3kcu_A 145 WGLNVLQTADHK--VHHTFIEAVCLGILANLMVCLAV 179 (285)
T ss_dssp HHHHHHHHHHHT--TCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--hCCCHHHHHHHHHHHHHHHHHHH
Confidence 00000011111 12467888877777776665543
No 31
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=20.05 E-value=2.8e+02 Score=25.05 Aligned_cols=112 Identities=19% Similarity=0.209 Sum_probs=61.0
Q ss_pred chHHHHHHHHHHHHHHHHHhcc-CccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHHHHHHHHhcccccccccCCC
Q psy16062 21 SMQPGLMFGFVVSTVICIFGHI-SGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSA 99 (396)
Q Consensus 21 ~~~~a~~~g~~~~~~i~~~~~i-SGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~ 99 (396)
.+..++.+.+++...+..=+.. +| |-.....-++.||.++++.+--+.-=.+|=++|+.+.-.+....-.. ..+.
T Consensus 64 ~ll~g~~F~~Gl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~-~~~~ 139 (268)
T 3tds_E 64 KIVMGLSFAIALSLVIMTGTELFTG---NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLV-DKGP 139 (268)
T ss_dssp HHHHHHTCTHHHHHHHHHTCCCHHH---HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-SSSH
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccC-CCcH
Confidence 3455666666666665543221 12 33323344578999999988777777777777766655554211100 0000
Q ss_pred --CCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhc
Q psy16062 100 --GLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVW 138 (396)
Q Consensus 100 --~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~ 138 (396)
+......... .+.+..+.|+-=+++-++..+.+....
T Consensus 140 ~~~~~~~ia~~K--~~~~~~~~f~~gIlcN~lVclaVw~~~ 178 (268)
T 3tds_E 140 VAEFFANTAASK--ASMPFTALFFRGILCNILVCVSVLCSF 178 (268)
T ss_dssp HHHHHHHHHHHH--HSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--hCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000000001 135678888888888888888777553
Done!