RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy16062
(396 letters)
>gnl|CDD|238204 cd00333, MIP, Major intrinsic protein (MIP) superfamily. Members of
the MIP superfamily function as membrane channels that
selectively transport water, small neutral molecules,
and ions out of and between cells. The channel proteins
share a common fold: the N-terminal cytosolic portion
followed by six transmembrane helices, which might have
arisen through gene duplication. On the basis of
sequence similarity and functional characteristics, the
superfamily can be subdivided into two major groups:
water-selective channels called aquaporins (AQPs) and
glycerol uptake facilitators (GlpFs). AQPs are found in
all three kingdoms of life, while GlpFs have been
characterized only within microorganisms.
Length = 228
Score = 151 bits (384), Expect = 9e-44
Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 6/217 (2%)
Query: 1 MLMFFGCMSLVQ--GFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLL 58
+L+FFGC S++ + L +GF + ++ GHISG H+NP+V+++ +
Sbjct: 12 LLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVG 71
Query: 59 EMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQ 118
++ ++ Y+ +Q+LG ++G L+ + L + + + G T P ++
Sbjct: 72 GRFPLIRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGN 131
Query: 119 AFLAEFFSTSLLVFTCCGVWD-SRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARS 177
AF EF T +LV D G + L++A + GP TGASMNPARS
Sbjct: 132 AFFVEFIGTFILVLVVFATTDDPNGPPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARS 191
Query: 178 LAPAIYSN---VWTAHWIYWVAPILGSIVSTLLYKYV 211
L PA+++ W W+YWV P++G+I L+Y YV
Sbjct: 192 LGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228
Score = 96.6 bits (241), Expect = 3e-23
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 253 CLGEVLGTSMLMFFGCMSLVQ--GFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNP 310
L E LGT +L+FFGC S++ + L +GF + ++ GHISG H+NP
Sbjct: 3 YLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINP 62
Query: 311 SVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTV 370
+V+++ + ++ ++ Y+ +Q+LG ++G L+ + L +G+ + G T
Sbjct: 63 AVTLALAVGGRFPLIRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTY 122
Query: 371 PHASLTTVQAFLAEFFSTSLLVFT 394
P ++ AF EF T +LV
Sbjct: 123 PSPGVSNGNAFFVEFIGTFILVLV 146
Score = 63.8 bits (156), Expect = 9e-12
Identities = 50/203 (24%), Positives = 81/203 (39%), Gaps = 19/203 (9%)
Query: 118 QAFLAEFFSTSLLVFTCCGVWDSRNAKFGDS------VAIKFALVIALCSITVGPYTGAS 171
+ +LAEF T LLVF CG G + +A+ + I + VG +G
Sbjct: 1 RKYLAEFLGTFLLVFFGCGS-VLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGH 59
Query: 172 MNPARSLAPAIYSNVWTAHWI-YWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADV 230
+NPA +LA A+ I Y +A +LG+I+ L ++ + E L ++
Sbjct: 60 INPAVTLALAVGGRFPLIRVIPYIIAQLLGAILGAALLYGLYYGLY-----LEFLGANNI 114
Query: 231 ETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFG 290
+ P V E +GT +L+ + P P L G
Sbjct: 115 VAGIFGTYPSP----GVSNGNAFFVEFIGTFILVLVVFATTDDPNG--PPPGGLAPLAIG 168
Query: 291 FVVSTVICIFGHISGAHLNPSVS 313
+V+ + G I+GA +NP+ S
Sbjct: 169 LLVAAIGLAGGPITGASMNPARS 191
>gnl|CDD|215807 pfam00230, MIP, Major intrinsic protein. MIP (Major Intrinsic
Protein) family proteins exhibit essentially two
distinct types of channel properties: (1) specific water
transport by the aquaporins, and (2) small neutral
solutes transport, such as glycerol by the glycerol
facilitators.
Length = 218
Score = 140 bits (356), Expect = 9e-40
Identities = 68/209 (32%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 1 MLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEM 60
+ +FFG S + G + + L FG + T++ GHISGAHLNP+V+ + +
Sbjct: 20 LFVFFGVGSAL-GVKKLYGGLLAVALAFGLALFTLVYCTGHISGAHLNPAVTFALLVGRR 78
Query: 61 ITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAF 120
I+++ + Y+ +Q+LG + G L+ +T GF + + QAF
Sbjct: 79 ISLLRAIYYIIAQLLGAICGAALLKGVTNGLQRAG--------GFANS-LAPGVNAGQAF 129
Query: 121 LAEFFSTSLLVFTCCGVWDS-RNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLA 179
+ E T LV+T D RN G + + L + GPYTGASMNPARS
Sbjct: 130 VVEIILTFQLVYTVFATTDDPRNGSLGHVAPLAIGFAVFLNHLAGGPYTGASMNPARSFG 189
Query: 180 PAIYSNVWTAHWIYWVAPILGSIVSTLLY 208
PA+ W HW+YWV P++G+ ++ L+Y
Sbjct: 190 PAVVLWKWDDHWVYWVGPLIGAALAALVY 218
Score = 81.6 bits (202), Expect = 6e-18
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 245 RAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHIS 304
R+V + E L T + +FFG S + G + + L FG + T++ GHIS
Sbjct: 3 RSVSFWRAVIAEFLATLLFVFFGVGSAL-GVKKLYGGLLAVALAFGLALFTLVYCTGHIS 61
Query: 305 GAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSN 364
GAHLNP+V+ + + I++L + Y+ +Q+LG + G L+ +T + L+
Sbjct: 62 GAHLNPAVTFALLVGRRISLLRAIYYIIAQLLGAICGAALLKGVTNGLQRAGGFANSLAP 121
Query: 365 GFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC 396
G + QAF+ E T LV+T
Sbjct: 122 G---------VNAGQAFVVEIILTFQLVYTVF 144
Score = 56.9 bits (138), Expect = 2e-09
Identities = 51/206 (24%), Positives = 80/206 (38%), Gaps = 27/206 (13%)
Query: 113 SLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFG--DSVAIKFALVIALCSITVGPYTGA 170
S++ +A +AEF +T L VF G +G +VA+ F L + G +GA
Sbjct: 4 SVSFWRAVIAEFLATLLFVFFGVGSALGVKKLYGGLLAVALAFGLALFTLVYCTGHISGA 63
Query: 171 SMNPARSLAPAIYSNVWTAHWI-YWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPAD 229
+NPA + A + + I Y +A +LG+I L K V + L+P
Sbjct: 64 HLNPAVTFALLVGRRISLLRAIYYIIAQLLGAICGAALLKGVTNGLQRAGGFANSLAPG- 122
Query: 230 VETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMF--FGCMSLVQGFSQTPIPSMQPGL 287
+ GQ F E++ T L++ F + S + L
Sbjct: 123 --VNAGQ----AFVV-----------EIILTFQLVYTVFATTDDPRNGSLGHV----APL 161
Query: 288 MFGFVVSTVICIFGHISGAHLNPSVS 313
GF V G +GA +NP+ S
Sbjct: 162 AIGFAVFLNHLAGGPYTGASMNPARS 187
>gnl|CDD|233156 TIGR00861, MIP, MIP family channel proteins. 1.A.8 The Major
Intrinsic Protein (MIP) FamilyThe MIP family is large
and diverse, possessing over 100 members that all form
transmembrane channels. These channel proteins function
in water, smallcarbohydrate (e.g., glycerol), urea, NH3,
CO2 and possibly ion transport by an energy independent
mechanism. They are found ubiquitously in bacteria,
archaeaand eukaryotes. The MIP family contains two major
groups of channels: aquaporins and glycerol
facilitators.The known aquaporins cluster loosely
together as do the known glycerol facilitators. MIP
family proteins are believed to form aqueous pores that
selectively allow passive transport of their solute(s)
across the membrane with minimal apparent recognition.
Aquaporins selectively transport water (but not
glycerol) while glycerol facilitators selectively
transport glycerol but not water. Some aquaporins can
transport NH3 and CO2. Glycerol facilitators function as
solute nonspecific channels, and may transport glycerol,
dihydroxyacetone, propanediol, urea and other small
neutral molecules in physiologically importantprocesses.
Some members of the family, including the yeast FPS
protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport
both water and small solutes [Transport and binding
proteins, Unknown substrate].
Length = 216
Score = 139 bits (352), Expect = 3e-39
Identities = 73/217 (33%), Positives = 117/217 (53%), Gaps = 17/217 (7%)
Query: 1 MLMFFGCMSLVQGFSQTPIPSMQPG------LMFGFVVSTVICIFGHISGAHLNPSVSVS 54
+L+FFG S + ++ G L FG V+T++ G ISGAHLNP+V+++
Sbjct: 8 LLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIA 67
Query: 55 AFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASL 114
L + + +Y+ +Q++G ++G L+ +T LFP + A A +
Sbjct: 68 LLLGRRFPLKRVPVYIVAQLIGAILGAALLYGLTSG--LFPGNLAV------NGSASAGV 119
Query: 115 TTVQAFLAEFFSTSLLVFTCCGVWDSRNAKF-GDSVAIKFALVIALCSITVGPYTGASMN 173
++ QAF EF T++LV D RN G + L++ L +++GPYTG MN
Sbjct: 120 SSGQAFFVEFIGTAILVLVIFATTDDRNRVPRGGFAPLAIGLLVFLIHLSMGPYTGTGMN 179
Query: 174 PARSLAPAIYSNV--WTAHWIYWVAPILGSIVSTLLY 208
PARSL PA+++ + W HW+YWV PI+G+I+ L+Y
Sbjct: 180 PARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216
Score = 80.0 bits (198), Expect = 2e-17
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 14/146 (9%)
Query: 255 GEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPG------LMFGFVVSTVICIFGHISGAHL 308
E LGT +L+FFG S + ++ G L FG V+T++ G ISGAHL
Sbjct: 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHL 60
Query: 309 NPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCT 368
NP+V+++ L + + +Y+ +Q++G ++G L+ +T LFP A
Sbjct: 61 NPAVTIALLLGRRFPLKRVPVYIVAQLIGAILGAALLYGLTSG--LFPGNLAV------N 112
Query: 369 TVPHASLTTVQAFLAEFFSTSLLVFT 394
A +++ QAF EF T++LV
Sbjct: 113 GSASAGVSSGQAFFVEFIGTAILVLV 138
Score = 43.8 bits (104), Expect = 5e-05
Identities = 51/232 (21%), Positives = 87/232 (37%), Gaps = 30/232 (12%)
Query: 122 AEFFSTSLLVFTCCGV-----WDSRNAKFGDS----VAIKFALVIALCSITVGPYTGASM 172
AEF T LLVF G G VA+ F L +A VG +GA +
Sbjct: 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHL 60
Query: 173 NPARSLAPAIYSNV-WTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVE 231
NPA ++A + +Y VA ++G+I+ L + S L P ++
Sbjct: 61 NPAVTIALLLGRRFPLKRVPVYIVAQLIGAILGAALLYGLTSG----------LFPGNLA 110
Query: 232 TSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGF 291
+ V + E +GT++L+ + ++ P P L G
Sbjct: 111 VN-------GSASAGVSSGQAFFVEFIGTAILV-LVIFATTDDRNRVPRGGFAP-LAIGL 161
Query: 292 VVSTVICIFGHISGAHLNPSVSV-SAFLLEMITMLELVLYVCSQVLGCLIGV 342
+V + G +G +NP+ S+ A + +Y ++G ++G
Sbjct: 162 LVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGA 213
>gnl|CDD|223653 COG0580, GlpF, Glycerol uptake facilitator and related permeases
(Major Intrinsic Protein Family) [Carbohydrate transport
and metabolism].
Length = 241
Score = 123 bits (311), Expect = 5e-33
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 15/225 (6%)
Query: 1 MLMFFGCMSLVQ----GFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAF 56
+L+FFG S+ G + L +G V I FG ISGAHLNP+V+++
Sbjct: 17 LLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALA 76
Query: 57 LLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTT 116
+ +++ Y+ +QVLG G L+ ++ +IL S G +T P +
Sbjct: 77 VRGRFPWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGY-SL 135
Query: 117 VQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPAR 176
QAFL EF T +LV + D NA G + L++ +++GP TG ++NPAR
Sbjct: 136 GQAFLIEFVGTFVLVLGILALTDDGNANAG-FAPLAIGLLVTAIGLSLGPTTGTAINPAR 194
Query: 177 SLAPAIYSNVW---------TAHWIYWVAPILGSIVSTLLYKYVF 212
L P + ++ + WI + PI+G+I+ LLYK +
Sbjct: 195 DLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLL 239
Score = 85.8 bits (213), Expect = 3e-19
Identities = 49/146 (33%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 253 CLGEVLGTSMLMFFGCMSLVQ----GFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHL 308
L E LGT +L+FFG S+ G + L +G V I FG ISGAHL
Sbjct: 8 LLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHL 67
Query: 309 NPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCT 368
NP+V+++ + +++ Y+ +QVLG G L+ ++ +IL G S G +
Sbjct: 68 NPAVTIALAVRGRFPWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFS 127
Query: 369 TVPHASLTTVQAFLAEFFSTSLLVFT 394
T P + QAFL EF T +LV
Sbjct: 128 TSPGGY-SLGQAFLIEFVGTFVLVLG 152
Score = 49.9 bits (120), Expect = 6e-07
Identities = 50/245 (20%), Positives = 90/245 (36%), Gaps = 30/245 (12%)
Query: 120 FLAEFFSTSLLVFTCCGV------WDSRNAKFG-DSVAIKFALVIALCSITVGPYTGASM 172
LAEF T LL+F G S+ G +A+ + L + + G +GA +
Sbjct: 8 LLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHL 67
Query: 173 NPARSLAPAIYSNV-WTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVE 231
NPA ++A A+ W Y VA +LG+ L Y+ + + L+
Sbjct: 68 NPAVTIALAVRGRFPWRKVLPYIVAQVLGAFAGAALL-YLLYYGKILETEGDPLASLGAF 126
Query: 232 TSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGF 291
++ L E +GT +L+ G ++L + L G
Sbjct: 127 STSPGGYSLGQA---------FLIEFVGTFVLV-LGILALTDD---GNANAGFAPLAIGL 173
Query: 292 VVSTVICIFGHISGAHLNPSVS----VSAFLLEMITMLELVLY----VCSQVLGCLIGVG 343
+V+ + G +G +NP+ ++ L Y V ++G ++G
Sbjct: 174 LVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGAL 233
Query: 344 LVNII 348
L ++
Sbjct: 234 LYKLL 238
>gnl|CDD|235453 PRK05420, PRK05420, aquaporin Z; Provisional.
Length = 231
Score = 110 bits (278), Expect = 2e-28
Identities = 76/221 (34%), Positives = 109/221 (49%), Gaps = 12/221 (5%)
Query: 2 LMFFGCMS--LVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLE 59
L+F GC S L F + I + L FG V T+ GHISG H NP+VSV +
Sbjct: 15 LVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGG 74
Query: 60 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGL-SNGFCTTVP-HASLTTV 117
ELV Y+ +QV+G + ++ +I + F ++ +G SNG+ P SL
Sbjct: 75 RFPAKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLA- 133
Query: 118 QAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALV-IALCSITVGPYTGASMNPAR 176
A + E T+ + G D R +AI AL I L SI P T S+NPAR
Sbjct: 134 -ALVCEVVLTAFFLLVILGATDKRAPAGFAPIAIGLALTLIHLISI---PVTNTSVNPAR 189
Query: 177 SLAPAIYSNVWTAH--WIYWVAPILGSIVSTLLYKYVFSKD 215
S A++ W W++WVAPI+G+I+ L+Y+ + KD
Sbjct: 190 STGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230
Score = 65.4 bits (160), Expect = 3e-12
Identities = 46/145 (31%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 253 CLGEVLGTSMLMFFGCMS--LVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNP 310
E GT L+F GC S L F + I + L FG V T+ GHISG H NP
Sbjct: 5 LAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNP 64
Query: 311 SVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGL-SNGFCTT 369
+VSV + ELV Y+ +QV+G + ++ +I + F + +G SNG+
Sbjct: 65 AVSVGLWAGGRFPAKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEH 124
Query: 370 VP-HASLTTVQAFLAEFFSTSLLVF 393
P SL A + E T+ +
Sbjct: 125 SPGGYSLLA--ALVCEVVLTAFFLL 147
Score = 29.9 bits (68), Expect = 2.0
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 120 FLAEFFSTSLLVFTCCG--VWDSRNAKFGDS---VAIKFALVIALCSITVGPYTGASMNP 174
AEFF T LVF CG V + + G VA+ F L + + VG +G NP
Sbjct: 5 LAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNP 64
Query: 175 ARSLAPAIYSNVWTAHWI-YWVAPILGSIV-STLLY 208
A S+ + Y +A ++G I + +LY
Sbjct: 65 AVSVGLWAGGRFPAKELVPYIIAQVVGGIAAAAVLY 100
>gnl|CDD|177663 PLN00026, PLN00026, aquaporin NIP; Provisional.
Length = 298
Score = 99.6 bits (248), Expect = 1e-23
Identities = 66/198 (33%), Positives = 91/198 (45%), Gaps = 14/198 (7%)
Query: 29 GFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIIT 88
G V VI GHISGAHLNPS++++ L + Y+ +QV +
Sbjct: 112 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWKHVPAYIAAQVSASICAS-----FA 166
Query: 89 PEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDS 148
+ + P S G+ TVP S++T QAF EF T L+F V A G+
Sbjct: 167 LKGVFHPFMSGGV------TVP--SVSTGQAFALEFIITFNLLFVVTAVATDTRA-VGEL 217
Query: 149 VAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLY 208
I + L + GP TG SMNP R+L PA+ + + A WIY VAP LG++ Y
Sbjct: 218 AGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTY 277
Query: 209 KYVFSKDHDGKNRPEQLS 226
V ++ DG S
Sbjct: 278 TAVKLREEDGDPPRPVRS 295
Score = 49.5 bits (118), Expect = 1e-06
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 20/142 (14%)
Query: 256 EVLGTSMLMFFGCMSLV----QGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPS 311
E +GT +L+F + ++T I + G V VI GHISGAHLNPS
Sbjct: 77 EFVGTFILIFAATAGPIVNQKYDGAETLIGNAACA---GLAVMIVILSTGHISGAHLNPS 133
Query: 312 VSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVP 371
++++ L + Y+ +QV + + + P S G+ TVP
Sbjct: 134 LTIAFAALRHFPWKHVPAYIAAQVSASICAS-----FALKGVFHPFMSGGV------TVP 182
Query: 372 HASLTTVQAFLAEFFSTSLLVF 393
S++T QAF EF T L+F
Sbjct: 183 --SVSTGQAFALEFIITFNLLF 202
>gnl|CDD|177778 PLN00184, PLN00184, aquaporin NIP1; Provisional.
Length = 296
Score = 97.0 bits (241), Expect = 9e-23
Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 15/219 (6%)
Query: 2 LMFFGCMSLVQGFSQTPIPSMQPGL--MFGFVVSTVICIFGHISGAHLNPSVSVSAFLLE 59
L+F GC S+V + ++ PG+ ++G + +I GHISGAH+NP+V+++
Sbjct: 67 LVFTGCASVVVNMQNDNVVTL-PGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCG 125
Query: 60 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSS---AGLSNGFCTTVPHASLTT 116
+ ++ YV SQV+G + + +LF + +G + F + P S
Sbjct: 126 RFPLKQVPAYVISQVIGSTLAAATL------RLLFGLDHDVCSGKHDVFIGSSPVGS--D 177
Query: 117 VQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPAR 176
+QAF+ EF T L+F GV + N G+ + + L + P + ASMNP R
Sbjct: 178 LQAFVMEFIVTFYLMFIISGV-ATDNRAIGELAGLAIGSTVLLNVLIAAPVSSASMNPGR 236
Query: 177 SLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKD 215
SL PA+ + WIY VAP LG+I +Y V D
Sbjct: 237 SLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTD 275
Score = 60.0 bits (145), Expect = 4e-10
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 246 AVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGL--MFGFVVSTVICIFGHI 303
+V L+ + EVLGT L+F GC S+V + ++ PG+ ++G + +I GHI
Sbjct: 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTL-PGIAIVWGLTIMVLIYSLGHI 108
Query: 304 SGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGS---A 360
SGAH+NP+V+++ + ++ YV SQV+G + + +LF + +
Sbjct: 109 SGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATL------RLLFGLDHDVCS 162
Query: 361 GLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVF 393
G + F + P S +QAF+ EF T L+F
Sbjct: 163 GKHDVFIGSSPVGS--DLQAFVMEFIVTFYLMF 193
Score = 38.1 bits (88), Expect = 0.005
Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 34/246 (13%)
Query: 113 SLTTVQAFLAEFFSTSLLVFTCCGV----WDSRNAKFGDSVAIKFALVIALCSITVGPYT 168
S+ +Q +AE T LVFT C + N +AI + L I + ++G +
Sbjct: 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHIS 109
Query: 169 GASMNPARSLAPAIYSNVWTAHW-IYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSP 227
GA +NPA ++A A Y ++ ++GS ++ + +F DHD +
Sbjct: 110 GAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCS------- 162
Query: 228 ADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMF---FGCMSLVQGFS--QTPIPS 282
GK V + +G L ++ F F M ++ G + I
Sbjct: 163 ---------------GKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAIGE 207
Query: 283 MQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGV 342
+ GL G V + I +S A +NP S+ ++ + +Y+ + LG + G
Sbjct: 208 LA-GLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMV-YGCYKGIWIYIVAPTLGAIAGA 265
Query: 343 GLVNII 348
+ N +
Sbjct: 266 WVYNTV 271
>gnl|CDD|165748 PLN00182, PLN00182, putative aquaporin NIP4; Provisional.
Length = 283
Score = 91.9 bits (228), Expect = 4e-21
Identities = 63/193 (32%), Positives = 94/193 (48%), Gaps = 21/193 (10%)
Query: 24 PGL--MFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGV 81
PG+ +G +V +I GHISGAH NP+V+V+ + ++ LY+ +Q+ G L+
Sbjct: 76 PGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWYQVPLYIGAQLTGSLLAS 135
Query: 82 GLVNI---ITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVW 138
+ + +TPE F T P S + QA +AE + LL+F GV
Sbjct: 136 LTLRLMFNVTPE-------------AFFGTTPTDS--SGQALVAEIIISFLLMFVISGV- 179
Query: 139 DSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPI 198
+ + G+ I + I L GP +GASMNPARSL PAI + W+Y V P
Sbjct: 180 ATDSRAVGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPF 239
Query: 199 LGSIVSTLLYKYV 211
+G I +Y +
Sbjct: 240 VGIIAGGFVYNLI 252
Score = 50.3 bits (120), Expect = 6e-07
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 246 AVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGL--MFGFVVSTVICIFGHI 303
V L + + E++GT ++F GC +V + PG+ +G +V +I GHI
Sbjct: 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITF-PGICVTWGLIVMVMIYSTGHI 96
Query: 304 SGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNI---ITPEEILFPVGSA 360
SGAH NP+V+V+ + ++ LY+ +Q+ G L+ + + +TPE
Sbjct: 97 SGAHFNPAVTVTFAIFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPE--------- 147
Query: 361 GLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVF 393
F T P S + QA +AE + LL+F
Sbjct: 148 ----AFFGTTPTDS--SGQALVAEIIISFLLMF 174
Score = 39.9 bits (93), Expect = 0.001
Identities = 52/252 (20%), Positives = 102/252 (40%), Gaps = 40/252 (15%)
Query: 106 CTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGD----SVAIKFALVIALCS 161
T P + + Q +AE T ++F+ CGV G + + + L++ +
Sbjct: 32 ICTSP-SIVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMI 90
Query: 162 ITVGPYTGASMNPARSLAPAIYSNV-WTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKN 220
+ G +GA NPA ++ AI+ W +Y A + GS++++L + +F
Sbjct: 91 YSTGHISGAHFNPAVTVTFAIFRRFPWYQVPLYIGAQLTGSLLASLTLRLMF------NV 144
Query: 221 RPEQL---SPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQ 277
PE +P D G+ L +++ F M ++ G +
Sbjct: 145 TPEAFFGTTPTDSS-----------------------GQALVAEIIISFLLMFVISGVAT 181
Query: 278 TPIPSMQ-PGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVL 336
+ G+ G + + + G ISGA +NP+ S+ ++ M + +Y+ +
Sbjct: 182 DSRAVGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIV-MGRYKGIWVYIVGPFV 240
Query: 337 GCLIGVGLVNII 348
G + G + N+I
Sbjct: 241 GIIAGGFVYNLI 252
>gnl|CDD|177664 PLN00027, PLN00027, aquaporin TIP; Provisional.
Length = 252
Score = 87.9 bits (218), Expect = 7e-20
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 10 LVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLY 69
L S TP + L F + + + +ISG H+NP+V+ AF+ IT++ +LY
Sbjct: 47 LTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILY 106
Query: 70 VCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSL 129
+Q+LG ++ L+ T S+ LS+G + AF+ E T
Sbjct: 107 WIAQLLGSVVACLLLKFSTGGL---ETSAFSLSSG---------VGVWNAFVFEIVMTFG 154
Query: 130 LVFTCCGVW-DSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWT 188
LV+T D + G I ++ + G + GASMNPA S PA+ S WT
Sbjct: 155 LVYTVYATAVDPKKGDLGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWT 214
Query: 189 AHWIYWVAPILGSIVSTLLYKYVFSKDH 216
HW+YW P++G ++ L+Y+ +F
Sbjct: 215 NHWVYWAGPLIGGGIAGLVYELIFIGST 242
Score = 41.7 bits (98), Expect = 3e-04
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 250 LELCLGEVLGTSMLMFFGCMS------LVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHI 303
L+ L E + T + +F G S L S TP + L F + + + +I
Sbjct: 20 LKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANI 79
Query: 304 SGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLS 363
SG H+NP+V+ AF+ IT+L +LY +Q+LG ++ L+ T + LS
Sbjct: 80 SGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLLLKFSTGGL---ETSAFSLS 136
Query: 364 NGFCTTVPHASLTTVQAFLAEFFSTSLLVFT 394
+G + AF+ E T LV+T
Sbjct: 137 SG---------VGVWNAFVFEIVMTFGLVYT 158
Score = 39.0 bits (91), Expect = 0.003
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 56/258 (21%)
Query: 116 TVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGD-----------SVAIKFALVIALCSITV 164
++A LAEF ST + VF G + N + ++A FAL +A ++V
Sbjct: 19 ALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVA---VSV 75
Query: 165 GP-YTGASMNPARSLAPAIYSNVWTAHWI-YWVAPILGSIVSTLLYKYVFSKDHDGKNRP 222
G +G +NPA + I N+ I YW+A +LGS+V+ LL K+
Sbjct: 76 GANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLLLKF------------ 123
Query: 223 EQLSPADVETSLGQIKPPRFGKRA-VKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTP-- 279
S G ++ F + V + + E ++M FG + V + P
Sbjct: 124 ----------STGGLETSAFSLSSGVGVWNAFVFE-----IVMTFGLVYTVYATAVDPKK 168
Query: 280 --IPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLG 337
+ + P + GF+V I G GA +NP+VS ++ V + G
Sbjct: 169 GDLGIIAP-IAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYW-----AG 222
Query: 338 CLIGVGLVNIITPEEILF 355
LIG G+ ++ E++F
Sbjct: 223 PLIGGGIAGLVY--ELIF 238
>gnl|CDD|215092 PLN00183, PLN00183, putative aquaporin NIP7; Provisional.
Length = 274
Score = 85.3 bits (211), Expect = 8e-19
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 29 GFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIIT 88
G V V+ G ISGAH+NPSV+++ ++ LY+ +Q +G ++
Sbjct: 86 GLTVVVVVFSIGSISGAHVNPSVTIAFATFGHFPWSKVPLYITAQTVGSVLAT------- 138
Query: 89 PEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDS 148
VS G+ TT P + AF EF +T +++F + S+ G
Sbjct: 139 ----YVGVSVYGVKADLMTTKP--AQGCSSAFWVEFIATFIVMFLAASL-TSQPQSLGHL 191
Query: 149 VAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLY 208
+ I L + GP +G SMNPARSL PAI S + WIY AP +G++ L++
Sbjct: 192 SGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMF 251
Query: 209 K 209
Sbjct: 252 H 252
Score = 59.5 bits (144), Expect = 5e-10
Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 32/252 (12%)
Query: 102 SNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCS 161
F L + LAE T +L+F CG+ S G+ +++A L
Sbjct: 30 QRLFGCLPYDMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTV 89
Query: 162 ITV----GPYTGASMNPARSLAPAIYSNV-WTAHWIYWVAPILGSIVSTLLYKYVFSKDH 216
+ V G +GA +NP+ ++A A + + W+ +Y A +GS+++T + V+
Sbjct: 90 VVVVFSIGSISGAHVNPSVTIAFATFGHFPWSKVPLYITAQTVGSVLATYVGVSVYG--- 146
Query: 217 DGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFS 276
V+ L KP + A + E + T ++MF Q S
Sbjct: 147 -------------VKADLMTTKPAQGCSSAFWV------EFIATFIVMFLAASLTSQPQS 187
Query: 277 QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVL 336
+ G + G + + I G +SG +NP+ S+ ++ ++ +Y+ + +
Sbjct: 188 LGHL----SGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSW-DFKDIWIYITAPTI 242
Query: 337 GCLIGVGLVNII 348
G + G + +++
Sbjct: 243 GAVAGALMFHLL 254
Score = 47.9 bits (114), Expect = 3e-06
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 16/146 (10%)
Query: 250 LELCLGEVLGTSMLMF--FGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAH 307
+ L E++GT +LMF G ++ Q S + ++ G V V+ G ISGAH
Sbjct: 45 ARMVLAEMVGTFILMFCVCGIIASTQ-LSGGEVGLLEYAATAGLTVVVVVFSIGSISGAH 103
Query: 308 LNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFC 367
+NPSV+++ ++ LY+ +Q +G ++ V G+
Sbjct: 104 VNPSVTIAFATFGHFPWSKVPLYITAQTVGSVLAT-----------YVGVSVYGVKADLM 152
Query: 368 TTVPHASLTTVQAFLAEFFSTSLLVF 393
TT P + AF EF +T +++F
Sbjct: 153 TTKP--AQGCSSAFWVEFIATFIVMF 176
>gnl|CDD|165733 PLN00166, PLN00166, aquaporin TIP2; Provisional.
Length = 250
Score = 81.9 bits (202), Expect = 7e-18
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 30 FVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITP 89
F + + I +ISG HLNP+V++ + IT++ Y +Q LG ++ L+ +T
Sbjct: 65 FALFVGVSIAANISGGHLNPAVTLGLAIGGNITIITGFFYWIAQCLGSIVACLLLVFVTN 124
Query: 90 EEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTC-CGVWDSRNAKFGDS 148
E V + G++ G L ++ + E T LV+T D + G
Sbjct: 125 GE---SVPTHGVAAG---------LGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTI 172
Query: 149 VAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLY 208
I ++ + GP++G SMNPARS PA+ S ++ WIYWV P++G ++ L+Y
Sbjct: 173 APIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIY 232
Query: 209 KYVF 212
VF
Sbjct: 233 GDVF 236
Score = 39.9 bits (93), Expect = 0.001
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 113 SLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGD---------SVAIKFALVIALCSIT 163
S+ +++A+L+EF +T L VF G + D +VA+ A + +
Sbjct: 14 SVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSI 73
Query: 164 VGPYTGASMNPARSLAPAIYSNVWT-AHWIYWVAPILGSIVSTLLYKYV 211
+G +NPA +L AI N+ + YW+A LGSIV+ LL +V
Sbjct: 74 AANISGGHLNPAVTLGLAIGGNITIITGFFYWIAQCLGSIVACLLLVFV 122
Score = 37.6 bits (87), Expect = 0.008
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 18/155 (11%)
Query: 246 AVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIF----- 300
+V L+ L E + T + +F G S + T ++ P + V+ +F
Sbjct: 14 SVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSI 73
Query: 301 -GHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGS 359
+ISG HLNP+V++ + IT++ Y +Q LG ++ L+ +T E V +
Sbjct: 74 AANISGGHLNPAVTLGLAIGGNITIITGFFYWIAQCLGSIVACLLLVFVTNGE---SVPT 130
Query: 360 AGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFT 394
G++ G L ++ + E T LV+T
Sbjct: 131 HGVAAG---------LGAIEGVVMEIVVTFALVYT 156
>gnl|CDD|240230 PTZ00016, PTZ00016, aquaglyceroporin; Provisional.
Length = 294
Score = 75.2 bits (185), Expect = 3e-15
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 21/201 (10%)
Query: 29 GFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGV------- 81
G V+ + + ISG HLNP+V++ + +L Y +Q+LG +G
Sbjct: 91 GLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKKLPGYFVAQLLGAFVGAACVYGLY 150
Query: 82 -GLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDS 140
G E+ + + G + G T P A +E T++L+ + D
Sbjct: 151 YGFFKDHGIPELPWETMANGFA-GVFATYPREGNFY--AIFSELILTAILLLVILAITDP 207
Query: 141 RNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYS------NVWTAH---- 190
N + + + L++ + I+ G TG ++NPAR L P ++S V+T
Sbjct: 208 NNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYF 267
Query: 191 WIYWVAPILGSIVSTLLYKYV 211
W+ VAP +G+++ LY
Sbjct: 268 WVPLVAPFVGAVLGMFLYDKF 288
Score = 47.8 bits (114), Expect = 4e-06
Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 16/155 (10%)
Query: 253 CLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIF--GHISGAHLNP 310
+ E LGT +L+FFG +V + G+ + + ISG HLNP
Sbjct: 53 YVAEFLGTFVLLFFG-EGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNP 111
Query: 311 SVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLV---------NIITPEEILFPVGSAG 361
+V++ + +L Y +Q+LG +G V + PE A
Sbjct: 112 AVTLGNAVFGKFPWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWE--TMAN 169
Query: 362 LSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC 396
G T P A +E T++L+
Sbjct: 170 GFAGVFATYPREGNFY--AIFSELILTAILLLVIL 202
Score = 33.2 bits (76), Expect = 0.18
Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 14/212 (6%)
Query: 117 VQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYT-----GAS 171
V+ ++AEF T +L+F GV + + + + + L +T G G
Sbjct: 50 VREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGL-GVTFGLLVSAGISGGH 108
Query: 172 MNPARSLAPAIYSNV-WTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADV 230
+NPA +L A++ W Y+VA +LG+ V Y + +L +
Sbjct: 109 LNPAVTLGNAVFGKFPWKKLPGYFVAQLLGAFVGAAC-VYGLYYGFFKDHGIPELPWETM 167
Query: 231 ETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFG 290
+ + + E++ T++L+ + + + P + P + G
Sbjct: 168 ANGFAGVFATYPREGNFYAI---FSELILTAILLL--VILAITDPNNCPAFNYLP-VAVG 221
Query: 291 FVVSTVICIFGHISGAHLNPSVSVSAFLLEMI 322
+V + FG +G LNP+ + L I
Sbjct: 222 LLVFVIGISFGGNTGYALNPARDLGPRLFSAI 253
>gnl|CDD|215085 PLN00167, PLN00167, aquaporin TIP5; Provisional.
Length = 256
Score = 67.2 bits (164), Expect = 1e-12
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 12/202 (5%)
Query: 10 LVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLY 69
L+ + P + + F +S+ + I +ISG H+NP+V+ + I++ + Y
Sbjct: 49 LMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGGHISVPTAMFY 108
Query: 70 VCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSL 129
SQ+L ++ + + T + + A GF +V LT
Sbjct: 109 WISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFG------------ 156
Query: 130 LVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTA 189
LV+T D R G + LV + GP++G SMNPA + A+ + +
Sbjct: 157 LVYTVYAAGDPRRGLLGAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFKN 216
Query: 190 HWIYWVAPILGSIVSTLLYKYV 211
+YWV P+LG V+ LLY V
Sbjct: 217 QAVYWVGPLLGGAVAGLLYDNV 238
Score = 35.3 bits (81), Expect = 0.036
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 113 SLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVI-------ALCSIT-- 163
+ ++++LAEF ST VF G S D+ + +L+I AL S
Sbjct: 18 TRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYI 77
Query: 164 VGPYTGASMNPARSLAPAI--YSNVWTAHWIYWVAPILGSIVSTLLYK 209
+G +NPA + A+ + +V TA YW++ +L S+++ L K
Sbjct: 78 AANISGGHVNPAVTFGMAVGGHISVPTA-MFYWISQMLASVMACLFLK 124
Score = 30.6 bits (69), Expect = 1.2
Identities = 24/106 (22%), Positives = 47/106 (44%)
Query: 271 LVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLY 330
L+ + P + + F +S+ + I +ISG H+NP+V+ + I++ + Y
Sbjct: 49 LMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGGHISVPTAMFY 108
Query: 331 VCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLT 376
SQ+L ++ + + T + + A GF +V LT
Sbjct: 109 WISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLT 154
>gnl|CDD|233711 TIGR02076, pyrH_arch, uridylate kinase, putative. This family
consists of the archaeal and spirochete proteins most
closely related to bacterial uridylate kinases
(TIGR02075), an enzyme involved in pyrimidine
biosynthesis. Members are likely, but not known, to be
functionally equivalent to their bacterial counterparts.
However, substantial sequence differences suggest that
regulatory mechanisms may be different; the bacterial
form is allosterically regulated by GTP [Purines,
pyrimidines, nucleosides, and nucleotides, Nucleotide
and nucleoside interconversions].
Length = 221
Score = 28.4 bits (64), Expect = 5.0
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Query: 108 TVPHASLTTVQAFLAEFFSTSLLVFTCC--GVWDSRNAKFGDSVAIK 152
T P + V A LAEF LL+ GV+D K D+
Sbjct: 111 THPGHTTDAVAALLAEFSKADLLINATNVDGVYDKDPKKDPDAKKFD 157
>gnl|CDD|178087 PLN02468, PLN02468, putative pectinesterase/pectinesterase
inhibitor.
Length = 565
Score = 28.3 bits (63), Expect = 8.1
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 82 GLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLA---EFFSTSLLV 131
G N IT + P + G+S CT +P LT+V+ FL + +ST++++
Sbjct: 431 GQQNTITAQGRTDPNQNTGISIQNCTILPLGDLTSVKTFLGRPWKNYSTTVIM 483
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450. Cytochrome P450s are
haem-thiolate proteins involved in the oxidative
degradation of various compounds. They are particularly
well known for their role in the degradation of
environmental toxins and mutagens. They can be divided
into 4 classes, according to the method by which
electrons from NAD(P)H are delivered to the catalytic
site. Sequence conservation is relatively low within the
family - there are only 3 absolutely conserved residues
- but their general topography and structural fold are
highly conserved. The conserved core is composed of a
coil termed the 'meander', a four-helix bundle, helices
J and K, and two sets of beta-sheets. These constitute
the haem-binding loop (with an absolutely conserved
cysteine that serves as the 5th ligand for the haem
iron), the proton-transfer groove and the absolutely
conserved EXXR motif in helix K. While prokaryotic P450s
are soluble proteins, most eukaryotic P450s are
associated with microsomal membranes. their general
enzymatic function is to catalyze regiospecific and
stereospecific oxidation of non-activated hydrocarbons
at physiological temperatures.
Length = 461
Score = 28.4 bits (64), Expect = 8.4
Identities = 13/54 (24%), Positives = 16/54 (29%), Gaps = 12/54 (22%)
Query: 242 FGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFS-----QTPIPSMQPGLMFG 290
G R CLGE L M +L+Q F T P +
Sbjct: 405 AGPRN------CLGERLARME-MKLFLATLLQNFEVELPPGTDPPDIDETPGLL 451
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.327 0.140 0.434
Gapped
Lambda K H
0.267 0.0765 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 19,895,471
Number of extensions: 1936839
Number of successful extensions: 2585
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2496
Number of HSP's successfully gapped: 91
Length of query: 396
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 297
Effective length of database: 6,546,556
Effective search space: 1944327132
Effective search space used: 1944327132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (26.8 bits)