Query psy16064
Match_columns 515
No_of_seqs 149 out of 1535
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 19:55:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16064.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16064hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xq2_A Sodium/glucose cotransp 100.0 2.7E-62 9.2E-67 540.1 40.8 418 11-490 6-507 (593)
2 3dh4_A Sodium/glucose cotransp 100.0 2.3E-61 7.8E-66 526.2 37.5 390 43-491 11-479 (530)
3 2jln_A MHP1; hydantoin, transp 99.1 1.5E-07 5E-12 101.5 33.4 341 50-486 23-450 (501)
4 3l1l_A Arginine/agmatine antip 98.6 7.1E-05 2.4E-09 78.2 33.1 244 51-345 7-299 (445)
5 3gia_A Uncharacterized protein 98.4 0.00041 1.4E-08 72.4 30.8 78 51-128 5-83 (444)
6 4djk_A Probable glutamate/gamm 96.8 0.62 2.1E-05 49.0 27.6 94 51-148 10-106 (511)
7 2wsw_A BCCT family betaine/car 95.8 2.6 8.8E-05 44.9 29.1 47 303-350 394-442 (509)
8 4ain_A Glycine betaine transpo 94.6 2.4 8E-05 45.5 19.9 49 302-350 394-443 (539)
9 3mp7_B Preprotein translocase 21.3 1.6E+02 0.0055 21.8 5.0 25 352-378 19-43 (61)
10 3rlb_A THIT; S-component, ECF 13.5 2.9E+02 0.0098 25.1 5.9 29 410-438 104-134 (192)
No 1
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=100.00 E-value=2.7e-62 Score=540.13 Aligned_cols=418 Identities=22% Similarity=0.273 Sum_probs=342.8
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHhhccCC--CChhhHHHhCCCCChHHHHHHHHHhhhhhhhhccccHHHhhhhhHHH
Q psy16064 11 RMIDVYGIAGILTFYSIVLVVGIWAGTKQKN--HGEEEVMLAGRSIGKIVGVLTLIATWGGGSYFTGTAESLFSTGLLWC 88 (515)
Q Consensus 11 ~~~~~~~~i~i~~y~~~~l~ig~~~~r~~~~--~s~~dy~laGR~l~~~~~~~s~~at~~s~~~~ig~~g~~y~~G~~~~ 88 (515)
..++..|++++++|+++++++|+|.+||.|+ +|.|||++|||++|+|..++|+.||++|+++++|.+|.+|++|+++.
T Consensus 6 ~~~~~~d~~i~~~yl~~~~~ig~~~~r~~~~~~~~~~dy~laGR~l~~~~~~~Sl~at~~sa~t~lG~~g~~y~~G~~~~ 85 (593)
T 2xq2_A 6 HGLSFIDIMVFAIYVAIIIGVGLWVSRDKKGTQKSTEDYFLAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIA 85 (593)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHTCC-------------------CCHHHHHHHHHGGGSSHHHHHHHHHHHHHTCGGGG
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHhcCCCCCCHHHHHHHHHHHHhcHHHHhhHhHHHHHcCHHHH
Confidence 4578999999999999999999999988763 36899999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHhhCccchhHHHHHHHH-HHHHHHHHHHHhhchhhhhhhhhhhhhh
Q psy16064 89 QAPVGYSLTLVAGALIFAKPMRDAGYITMLDPFQKTYGRRIGGLLFLPALL-GDMLYLSSVLSSLGKQAKASLLFLPALL 167 (515)
Q Consensus 89 ~~~~g~~~~~~l~~~~~a~~~rr~~~~T~~e~~~~Rfg~~~~~l~ai~~ii-~~~~~la~~l~a~g~~~~~~~~~lp~~~ 167 (515)
++.+++.++.++.++++.|++||.+..|++|++++|||++.|.+.++..++ ..+++++.|+.+.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~p~~~r~~~~T~~e~l~~Rfg~~~~~~~ai~~l~~~~~~~~~~~l~~~~-------------- 151 (593)
T 2xq2_A 86 SYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGG-------------- 151 (593)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHTTCCSHHHHHHHHTCHHHHHHHHHHHHHHHHHTHHHHHHHHHH--------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 777888888888888999999999999999999999998888777776664 34568888888876
Q ss_pred hhhhhhhhhhhhhhhhhhccccccccchhhhHhhhCCchHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHH---
Q psy16064 168 GDMLYLSSVLSSLGKQAKASHYQVDLTGVSLKVILGISDYLSVTISTMFAVAYTISGGLYSVSYTDVLQLIFIVFGL--- 244 (515)
Q Consensus 168 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i~~~~~gi~~~~~i~i~~~iv~~Yt~~GGl~av~~tD~iQ~iim~ig~--- 244 (515)
.+++.++|+|++.++++.++++++||..||+|+++|||++|+++|+++.
T Consensus 152 ----------------------------~~l~~~~Gi~~~~~i~i~~~i~~~Yt~~GGl~av~~TD~iQ~iiml~~~l~v 203 (593)
T 2xq2_A 152 ----------------------------LALETILGIPLMYSILGLALFALVYSIYGGLSAVVWTDVIQVFFLVLGGFMT 203 (593)
T ss_dssp ----------------------------HHHHHHHCCCHHHHHHHHHHHHHHHHHTTC---CCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------HHHHHhcCccHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999999999999999999999999999999987643
Q ss_pred -----------------------------------------------------------------HHHHHHhcCCChHHH
Q psy16064 245 -----------------------------------------------------------------SYFQRILSLKSSTDA 259 (515)
Q Consensus 245 -----------------------------------------------------------------~~~qr~~aak~~~~a 259 (515)
+++||++++||+|++
T Consensus 204 ~~~~l~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~q~~~qR~laaks~k~a 283 (593)
T 2xq2_A 204 TYMAVSFIGGTDGWFAGVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEA 283 (593)
T ss_dssp HHHHHHHHHGGGHHHHHHHHHHHHCGGGSCSSCCSSSGGGGTSCTTHHHHSTHHHHHHHHHTTTCSHHHHHHTTSCHHHH
T ss_pred HHHHHHHcCCchhHHHHHHHHHhhChhhcccccCCCCcccccchHHHHHHHHHHHHHHHhhcCChHHHHHhheeCCHHHH
Confidence 247899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC------C----CCCCCCCCCCccchHHHHHHHhCchhHHHHHHHHHH
Q psy16064 260 VNVSLISATACFFIVIPAAIIGVLAKFVDWSKI------P----GYDKPFDMTESNSVLPLVLRYLTPGWVTFFGLGAVS 329 (515)
Q Consensus 260 r~~~~~~~~~~~~~~~~~~~iG~~~~~~~~~~~------~----g~p~~~~~~~~d~~~p~~~~~~lp~~l~gl~l~~ll 329 (515)
||+.++++.+..++.+....+|+.++....+.. . ..| +..|+|+++|.++ +.+|+++.|+++++++
T Consensus 284 r~~~~~~~~~~~~~~~~~~~~Gl~a~~~~~~~~~~~~~~~~~~~~~p---~~~~~d~~~p~l~-~~lp~~l~gl~~a~ll 359 (593)
T 2xq2_A 284 QKGIVFAAFLALIVPFLVVLPGIAAYVITSDPQLMASLGDIAATNLP---SAANADKAYPWLT-QFLPVGVKGVVFAALA 359 (593)
T ss_dssp HHHHHHHHHHTTTHHHHHTHHHHHHHHHHTCHHHHHHHC-----CCC---CSTBGGGHHHHHH-HTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccCC---CCCChhhHHHHHH-HHcChhHHHHHHHHHH
Confidence 999999998877777777788988876621100 0 011 2357899999999 9999999999999999
Q ss_pred HHHHHhHhHHHHhhhhhHHHHhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhc---chhHHHHHHHHHHhhhhhhH
Q psy16064 330 ASVMSSADSVILGSGSMFTRNIYHQSFRPKASEYELMWVLRLSILAASVISCSIALS---GASIYYLSVVCSDVVYVTLF 406 (515)
Q Consensus 330 AA~mST~~s~l~~~ss~~~~Di~~~~~~~~~s~k~~~~~~Ri~~~~v~~~~~~~a~~---~~~i~~l~~~~~~~~~~~l~ 406 (515)
||.|||+||.+++.++.+++|+|++++||+++|||+++++|+.++++++++..++.. .++++++....++..+++++
T Consensus 360 aA~mST~~s~l~a~st~~~~Diy~~~~~~~~s~~~~l~v~Ri~~v~~~~ia~~~a~~~~~~~~i~~~~~~~~g~~~~~~~ 439 (593)
T 2xq2_A 360 AAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIAALIAPMLGGIGQCFQYIQEYTGLVSPGIL 439 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHHHGGGGGGCBCHHHHHHHHHTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHhhHHH
Confidence 999999999999999999999999999999999999999999999999999999974 34677777767777788999
Q ss_pred HHHHHHhhcCCCCChHHHHHHHHHHHHHHHHhccCCCCCCccccCCCCccccccccchhhHHHHHHHHHHhhhhhccccc
Q psy16064 407 PQLVLVVHGANHVNSYGCLSSVVIGILLRITGGEPNLGLPALIKYPWYDYQLQQQLFPFKTMAMLLSAASHLLISKLAAI 486 (515)
Q Consensus 407 ~~ll~gl~wkr~~t~~ga~~s~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~s~i~~vvvSl~t~~ 486 (515)
|++++++|||| .|++|+++|+++|+++++.+... .+.. ...+...+++.+|+++++++|+++|+
T Consensus 440 ~~~llglfwkr-~~~~gA~~g~i~G~~~~~~~~~~---------~~~~------~~~~~~~~~~~~~~iv~v~vSl~t~~ 503 (593)
T 2xq2_A 440 AVFLLGLFWKK-TTSKGAIIGVVASIPFALFLKFM---------PLSM------PFMDQMLYTLLFTMVVIAFTSLSTSI 503 (593)
T ss_dssp HHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHS---------SCCC------CHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHH---------cCCc------cHHHHHHHHHHHHHHHHHhheeecCC
Confidence 99999999999 99999999999999999876320 1111 11233457899999999999999988
Q ss_pred cccc
Q psy16064 487 VFEK 490 (515)
Q Consensus 487 ~~~~ 490 (515)
++||
T Consensus 504 ~~~~ 507 (593)
T 2xq2_A 504 NDDD 507 (593)
T ss_dssp SSSC
T ss_pred Cchh
Confidence 7653
No 2
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.3e-61 Score=526.18 Aligned_cols=390 Identities=22% Similarity=0.249 Sum_probs=327.2
Q ss_pred ChhhHHHhCCCCChHHHHHHHHHhhhhhhhhccccHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHH
Q psy16064 43 GEEEVMLAGRSIGKIVGVLTLIATWGGGSYFTGTAESLFSTGLLWCQAPVGYSLTLVAGALIFAKPMRDAGYITMLDPFQ 122 (515)
Q Consensus 43 s~~dy~laGR~l~~~~~~~s~~at~~s~~~~ig~~g~~y~~G~~~~~~~~g~~~~~~l~~~~~a~~~rr~~~~T~~e~~~ 122 (515)
|.|||++|||++|+|..++|+.||++|+++++|.||.+|++|+++.++.+.+.++.++.+++++|++||.+..|+|||++
T Consensus 11 ~~~dy~laGR~l~~~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~~~~~~~~i~~~~~~p~~~~~~~~T~~e~l~ 90 (530)
T 3dh4_A 11 XXXXXXXAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVE 90 (530)
T ss_dssp HHHHHHCCCSCCCHHHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHHHHHHHHHHHHHHTHHHHHHTTCCSHHHHHH
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHH
Confidence 89999999999999999999999999999999999999999998877777777888888889999999999999999999
Q ss_pred HhhCccchhHHHHHHHHH-HHHHHHHHHHhhchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhccccccccchhhhHhh
Q psy16064 123 KTYGRRIGGLLFLPALLG-DMLYLSSVLSSLGKQAKASLLFLPALLGDMLYLSSVLSSLGKQAKASHYQVDLTGVSLKVI 201 (515)
Q Consensus 123 ~Rfg~~~~~l~ai~~ii~-~~~~la~~l~a~g~~~~~~~~~lp~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i~~~~ 201 (515)
+|||++.|.+.++..++. .+.+++.|+.+.+ .+++.+
T Consensus 91 ~Rfg~~~~~~~a~~~l~~~~~~~~~~~l~~~~------------------------------------------~~~~~~ 128 (530)
T 3dh4_A 91 KRFNKKLKTILAVFWISLYIFVNLTSVLYLGG------------------------------------------LALETI 128 (530)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTHHHHHHHHHH------------------------------------------HHHHHH
T ss_pred HHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------------HHHHHH
Confidence 999999888777766543 3456777777665 678899
Q ss_pred hCCchHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHH-------------------------------------
Q psy16064 202 LGISDYLSVTISTMFAVAYTISGGLYSVSYTDVLQLIFIVFGL------------------------------------- 244 (515)
Q Consensus 202 ~gi~~~~~i~i~~~iv~~Yt~~GGl~av~~tD~iQ~iim~ig~------------------------------------- 244 (515)
+|+|++.++++.++++++||.+||+|+|+|||++|+++|+++.
T Consensus 129 ~Gi~~~~~i~i~~~i~~~Yt~~GGl~aV~~TD~iQ~~im~~g~~~v~~~~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~ 208 (530)
T 3dh4_A 129 LGIPLMYSILGLALFALVYSIYGGLSAVVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAGVSKMVDAAPGHFEMILD 208 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHTTC------CCSHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHCGGGGCSSCC
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCchhcccccC
Confidence 9999999999999999999999999999999999999988654
Q ss_pred -------------------------------HHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC--
Q psy16064 245 -------------------------------SYFQRILSLKSSTDAVNVSLISATACFFIVIPAAIIGVLAKFVDWSK-- 291 (515)
Q Consensus 245 -------------------------------~~~qr~~aak~~~~ar~~~~~~~~~~~~~~~~~~~iG~~~~~~~~~~-- 291 (515)
+++||++++||+|++||+.++++.+..++.+...++|+.++..+++.
T Consensus 209 ~~~~~~~~~~~~~~~i~~~~~~~l~~~g~~q~i~qR~laaks~k~ar~~~~~~~~~~~~~~~~~~~~Gl~a~~~~~~~~~ 288 (530)
T 3dh4_A 209 QSNPQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDPQL 288 (530)
T ss_dssp SSSSGGGGSCTTHHHHSTHHHHHHHHTTTTCHHHHHHHSSSCHHHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHCHHH
T ss_pred CCCccccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 25699999999999999999999887777777788898887765320
Q ss_pred ---CCC--CCCCCCCCCccchHHHHHHHhCchhHHHHHHHHHHHHHHHhHhHHHHhhhhhHHHHhhhhccCCCCChHHHH
Q psy16064 292 ---IPG--YDKPFDMTESNSVLPLVLRYLTPGWVTFFGLGAVSASVMSSADSVILGSGSMFTRNIYHQSFRPKASEYELM 366 (515)
Q Consensus 292 ---~~g--~p~~~~~~~~d~~~p~~~~~~lp~~l~gl~l~~llAA~mST~~s~l~~~ss~~~~Di~~~~~~~~~s~k~~~ 366 (515)
..+ .+...+..++|+++|.+++ .+|+++.|+++++++||.|||+||.+++.|+.+++|+|++++||+++|||++
T Consensus 289 ~~~~~~~~~~~~~~~~~~d~~~p~l~~-~lp~~l~Gl~~a~llAA~mST~ss~l~s~st~~~~Diy~~~~~~~~s~~~~~ 367 (530)
T 3dh4_A 289 MASLGDIAATNLPSAANADKAYPWLTQ-FLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLV 367 (530)
T ss_dssp HHHHCTTCCSCCCCSSSGGGHHHHHHT-TCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCSCSCSSHHH
T ss_pred chhhcccccccCCCCCCcchHHHHHHH-HcchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHHHHHhcCCCCCHHHHH
Confidence 000 0000134689999999987 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcch---hHHHHHHHHHHhhhhhhHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHhccCCC
Q psy16064 367 WVLRLSILAASVISCSIALSGA---SIYYLSVVCSDVVYVTLFPQLVLVVHGANHVNSYGCLSSVVIGILLRITGGEPNL 443 (515)
Q Consensus 367 ~~~Ri~~~~v~~~~~~~a~~~~---~i~~l~~~~~~~~~~~l~~~ll~gl~wkr~~t~~ga~~s~i~G~~~~~~~~~~~~ 443 (515)
+++|+.+++++++++.++...+ +++++.....++.+++++|++++++|||| .|++|+++|+++|+++.+.+...
T Consensus 368 ~v~R~~~v~~~i~a~~~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~llgl~wkr-~~~~gA~~g~i~G~~~~~~~~~~-- 444 (530)
T 3dh4_A 368 NVGRTAAVVALIIACLIAPMLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKK-TTSKGAIIGVVASIPFALFLKFM-- 444 (530)
T ss_dssp HHHHHHHHHHHHHHHHHGGGGGGCSCHHHHHHHHHTTTHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHTS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHH--
Confidence 9999999999999999997543 35665555556667789999999999999 99999999999999999987421
Q ss_pred CCCccccCCCCccccccccchhhHHHHHHHHHHhhhhhcccccccccc
Q psy16064 444 GLPALIKYPWYDYQLQQQLFPFKTMAMLLSAASHLLISKLAAIVFEKK 491 (515)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~s~i~~vvvSl~t~~~~~~~ 491 (515)
.+.. +..+...+++++|+++.+++|++||+++||+
T Consensus 445 -------~~~~------~~~~~~~~~~~~~~i~~v~vSl~t~~~~~~~ 479 (530)
T 3dh4_A 445 -------PLSM------PFMDQMLYTLLFTMVVIAFTSLSTSINDDDP 479 (530)
T ss_dssp -------SSCC------CHHHHHHHHHHHHHHHHHHHHHTTCSSSSCT
T ss_pred -------cCCc------cHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Confidence 1111 1234456789999999999999999887764
No 3
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=99.10 E-value=1.5e-07 Score=101.48 Aligned_cols=341 Identities=10% Similarity=0.024 Sum_probs=187.0
Q ss_pred hCCCCChHHHHHHHHHhhhhhhhhccccHHHhhhhhHHHHHHHHHHHHHHHHHHHH---HHHHHhcCCCCchHHHHHhhC
Q psy16064 50 AGRSIGKIVGVLTLIATWGGGSYFTGTAESLFSTGLLWCQAPVGYSLTLVAGALIF---AKPMRDAGYITMLDPFQKTYG 126 (515)
Q Consensus 50 aGR~l~~~~~~~s~~at~~s~~~~ig~~g~~y~~G~~~~~~~~g~~~~~~l~~~~~---a~~~rr~~~~T~~e~~~~Rfg 126 (515)
..|+.+++-.+..-++..++..++.-.+ .... |++..+..++..+|.++...+. +..=.|.+.. .+++.+.+||
T Consensus 23 ~~R~~~~~~~~~~W~g~~~~i~~~~~Ga-~~~~-GLs~~~a~lai~lG~li~~~~~~l~~~~G~~~Gl~-~~v~~R~~FG 99 (501)
T 2jln_A 23 AERSVGPFSLAAIWFAMAIQVAIFIAAG-QMTS-SFQVWQVIVAIAAGCTIAVILLFFTQSAAIRWGIN-FTVAARMPFG 99 (501)
T ss_dssp GGCCBCHHHHHHHHHHHHCSTHHHHHHH-HHTT-TSCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCCC-HHHHTTTTSC
T ss_pred hhCCCCHHHHHHHHHHHHHHHHHHHHHH-HHhc-CcCHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCCC-hhhhhHhhcc
Confidence 3577788777655555555544442111 2223 7766655555555555443333 3334556664 8899999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhccccccccchhhhHhhhCCc-
Q psy16064 127 RRIGGLLFLPALLGDMLYLSSVLSSLGKQAKASLLFLPALLGDMLYLSSVLSSLGKQAKASHYQVDLTGVSLKVILGIS- 205 (515)
Q Consensus 127 ~~~~~l~ai~~ii~~~~~la~~l~a~g~~~~~~~~~lp~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i~~~~~gi~- 205 (515)
.+...+.++...+..+.|.+.|....|+ ++. .+++.++|++
T Consensus 100 ~~Gs~i~~ll~~i~~igw~~v~~~~gg~------------------------al~--------------~~~~~~~g~~~ 141 (501)
T 2jln_A 100 IRGSLIPITLKALLSLFWFGFQTWLGAL------------------------ALD--------------EITRLLTGFTN 141 (501)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHHHHHH------------------------HHH--------------HHHHHHHCCCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HHH--------------HHHHHhcCcch
Confidence 9877777777778888898888776651 000 2233344877
Q ss_pred hHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHH-----------------------------------------
Q psy16064 206 DYLSVTISTMFAVAYTISGGLYSVSYTDVLQLIFIVFGL----------------------------------------- 244 (515)
Q Consensus 206 ~~~~i~i~~~iv~~Yt~~GGl~av~~tD~iQ~iim~ig~----------------------------------------- 244 (515)
.+.++++..++.+..+ ..|+|.+.+.+.++..++++..
T Consensus 142 ~~v~~~i~~~l~~~~~-~~G~~~i~~~~~~~~p~~~i~~i~~~~~~l~~~g~~~~~~~~~~~~~~~~~f~~ai~~~~~~~ 220 (501)
T 2jln_A 142 LPLWIVIFGAIQVVTT-FYGITFIRWMNVFASPVLLAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFSTAIMIFVGGW 220 (501)
T ss_dssp HHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTCCCSSCCSCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhccCCccchHHHHHHHHHHHHHH
Confidence 5777777776666555 7889999999999876644322
Q ss_pred -------HHHHHHhcCCChHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCcc
Q psy16064 245 -------SYFQRILSLKSSTD------------AVNVSLISATACFFIVIPAAIIGVLAKFVDWSKIPGYDKPFDMTESN 305 (515)
Q Consensus 245 -------~~~qr~~aak~~~~------------ar~~~~~~~~~~~~~~~~~~~iG~~~~~~~~~~~~g~p~~~~~~~~d 305 (515)
.-+.|+. |++++ +.++..++. .+......++|....... +..||.
T Consensus 221 ~~~~~~~~DysRy~--~~~~~~~~~~~~~~~~~~~~g~~lG~---~i~~~~~~~lG~~~~~~~-----------~~~dp~ 284 (501)
T 2jln_A 221 IAVVVSIHDIVKEC--KVDPNASREGQTKADARYATAQWLGM---VPASIIFGFIGAASMVLV-----------GEWNPV 284 (501)
T ss_dssp HHHHTTTHHHHTTB--CCCTTCCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH-----------SCSCHH
T ss_pred HHHHhccCcccccC--CCCccccccchhhccchHHHHHHHHH---HHHHHHHHHHHHHHHHhc-----------cccCHH
Confidence 2244554 44444 222222222 222223334454332211 123444
Q ss_pred chHHHHHHHhCchhHHHHHH-HHHHHHHHHhHhH-HHHhhhhhHHHHhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHH
Q psy16064 306 SVLPLVLRYLTPGWVTFFGL-GAVSASVMSSADS-VILGSGSMFTRNIYHQSFRPKASEYELMWVLRLSILAASVISCSI 383 (515)
Q Consensus 306 ~~~p~~~~~~lp~~l~gl~l-~~llAA~mST~~s-~l~~~ss~~~~Di~~~~~~~~~s~k~~~~~~Ri~~~~v~~~~~~~ 383 (515)
.++..... .|.++..+.+ ..++.+.++|-+. .+.+.+..+.+. .+++ .+. |..+++.++++..+
T Consensus 285 ~~l~~~l~--~~~~~~~~~~~~~~~la~i~tn~~~n~ys~~~~l~~~-~~~~----i~~-------~~~~~i~~vi~~~i 350 (501)
T 2jln_A 285 IAITEVVG--GVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCST-FPRV----FTF-------KTGVIVSAVVGLLM 350 (501)
T ss_dssp HHHHHHHT--CCCHHHHHHHHHHHHHHHHTTHHHHHTHHHHHHHHHH-STTT----CCH-------HHHHHHHHHHHHHT
T ss_pred HHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHh-Cccc----cch-------hHHHHHHHHHHHHH
Confidence 33322211 2333355656 6677777787774 677777666544 2221 111 33344566777777
Q ss_pred Hhcch-h-HHHHHHHHHHhhhhhhHHHHHHHhhc-CCC------------------CChHHHHHHHHHHHHHHHHhccCC
Q psy16064 384 ALSGA-S-IYYLSVVCSDVVYVTLFPQLVLVVHG-ANH------------------VNSYGCLSSVVIGILLRITGGEPN 442 (515)
Q Consensus 384 a~~~~-~-i~~l~~~~~~~~~~~l~~~ll~gl~w-kr~------------------~t~~ga~~s~i~G~~~~~~~~~~~ 442 (515)
+.... + ..+.+.. .+.+-+++...++.-.|. ||+ .-.+.++.++++|.+......
T Consensus 351 ~~~~~~~~f~~FL~~-lg~~l~P~~gI~l~Dy~i~rr~~~~~~~l~~~~g~y~y~~g~n~~a~~a~~~G~~~~~~~~--- 426 (501)
T 2jln_A 351 MPWQFAGVLNTFLNL-LASALGPLAGIMISDYFLVRRRRISLHDLYRTKGIYTYWRGVNWVALAVYAVALAVSFLTP--- 426 (501)
T ss_dssp CGGGTHHHHHHHHHH-HHHTTHHHHHHHHHHHHTTSTTCCCHHHHTBSSSTTCTBTTBCHHHHHHHHHHHHHHHTCG---
T ss_pred HHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhcccCChHHhhCCCCccccCCCCCHHHHHHHHHHHHHHHHHh---
Confidence 65532 2 2222222 222223444433333332 321 123678889999988776420
Q ss_pred CCCCccccCCCCccccccccchhhHHHHHHHHHHhhhhhccccc
Q psy16064 443 LGLPALIKYPWYDYQLQQQLFPFKTMAMLLSAASHLLISKLAAI 486 (515)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~s~i~~vvvSl~t~~ 486 (515)
+ ++ ...++.++.+++.+.+...|+
T Consensus 427 ------------~-------~~-~~~g~~va~v~Y~~l~~~~~~ 450 (501)
T 2jln_A 427 ------------D-------LM-FVTGLIAALLLHIPAMRWVAK 450 (501)
T ss_dssp ------------G-------GH-HHHHHHHHHHHHHHHHHHHTT
T ss_pred ------------h-------hH-HHHHHHHHHHHHHHHHHhCch
Confidence 0 11 135889999999998877654
No 4
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=98.63 E-value=7.1e-05 Score=78.20 Aligned_cols=244 Identities=11% Similarity=-0.027 Sum_probs=132.1
Q ss_pred CCCCChHHHHHHHHHhhhhhhhhccccHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CchHHHHHhhCccc
Q psy16064 51 GRSIGKIVGVLTLIATWGGGSYFTGTAESLFSTGLLWCQAPVGYSLTLVAGALIFAKPMRDAGYI-TMLDPFQKTYGRRI 129 (515)
Q Consensus 51 GR~l~~~~~~~s~~at~~s~~~~ig~~g~~y~~G~~~~~~~~g~~~~~~l~~~~~a~~~rr~~~~-T~~e~~~~Rfg~~~ 129 (515)
.|+++++-......++.+|+..|.. |+.....|....+..+...+...+.++.+++.-++.+.. ..++|.++.+|+..
T Consensus 7 ~r~l~~~~~~~l~ig~~iG~Gif~~-~~~~~~~G~~~~~~~li~~~~~~~~a~~~~el~~~~p~~Gg~y~~~~~~~G~~~ 85 (445)
T 3l1l_A 7 AHKVGLIPVTLMVSGAIMGSGVFLL-PANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFL 85 (445)
T ss_dssp CCCBCHHHHHHHHHHHHCSSHHHHH-HHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTHHHHHHHHSCHHH
T ss_pred CCcccHHHHHHHHHHhHHhhhHHhh-HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCchhhHHhHcCChH
Confidence 5889999888888888888777765 444555665544322223344455666777777776554 78999999999876
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhccccccccchhhhHhhhCCc-hHH
Q psy16064 130 GGLLFLPALLGDMLYLSSVLSSLGKQAKASLLFLPALLGDMLYLSSVLSSLGKQAKASHYQVDLTGVSLKVILGIS-DYL 208 (515)
Q Consensus 130 ~~l~ai~~ii~~~~~la~~l~a~g~~~~~~~~~lp~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i~~~~~gi~-~~~ 208 (515)
..+.+....+......+.+..+.+.+ ..-++|.. +-+ +..
T Consensus 86 g~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------------------------------------~~~~~~~ 126 (445)
T 3l1l_A 86 GYQTNVLYWLACWIGNIAMVVIGVGY---LSYFFPIL------------------------------------KDPWVLT 126 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---TTTTCGGG------------------------------------GSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCccc------------------------------------cccHHHH
Confidence 66655554444333333333333210 00011110 000 111
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHH--------------------------------------------
Q psy16064 209 SVTISTMFAVAYTISGGLYSVSYTDVLQLIFIVFGL-------------------------------------------- 244 (515)
Q Consensus 209 ~i~i~~~iv~~Yt~~GGl~av~~tD~iQ~iim~ig~-------------------------------------------- 244 (515)
...+...+...+..+.|.|...+.+.+-..+.++..
T Consensus 127 ~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G 206 (445)
T 3l1l_A 127 ITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIG 206 (445)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCCCC-----------HHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhcccccCccCCccHHHHHHHHHHHHHHHHh
Confidence 122223333344445555555555444433322211
Q ss_pred --HHHHHHhcCCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCccchHHHHHHHhCchhHH
Q psy16064 245 --SYFQRILSLKSS-TDAVNVSLISATACFFIVIPAAIIGVLAKFVDWSKIPGYDKPFDMTESNSVLPLVLRYLTPGWVT 321 (515)
Q Consensus 245 --~~~qr~~aak~~-~~ar~~~~~~~~~~~~~~~~~~~iG~~~~~~~~~~~~g~p~~~~~~~~d~~~p~~~~~~lp~~l~ 321 (515)
....-.-..||+ |+..|+...+.....++++...+. .....|. .+..+.+..+....++..+++..
T Consensus 207 ~e~~~~~~~e~k~p~r~ip~a~~~~~~~~~~~y~~~~~~---~~~~~~~--------~~~~~~~~p~~~~~~~~~g~~~~ 275 (445)
T 3l1l_A 207 VESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTA---IMGMIPN--------AALRVSASPFGDAARMALGDTAG 275 (445)
T ss_dssp TTHHHHGGGGBSSHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHSCT--------TTSCSTTCTHHHHHHHHHCTTHH
T ss_pred HHHHHHHHHHhcCccccccHHHHHHHHHHHHHHHHHHHH---HHhcCCH--------HHHhccCcHHHHHHHHHhhHHHH
Confidence 111122236776 677888888776665554443222 1112221 11223455567777877777777
Q ss_pred HHHHHHHHHHHHHhHhHHHHhhhh
Q psy16064 322 FFGLGAVSASVMSSADSVILGSGS 345 (515)
Q Consensus 322 gl~l~~llAA~mST~~s~l~~~ss 345 (515)
.++..+.+.+..++..+.+.+.+=
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~sR 299 (445)
T 3l1l_A 276 AIVSFCAAAGCLGSLGGWTLLAGQ 299 (445)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777777777877777766654
No 5
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=98.38 E-value=0.00041 Score=72.41 Aligned_cols=78 Identities=12% Similarity=-0.012 Sum_probs=48.2
Q ss_pred CCCCChHHHHHHHHHhhhhhhhhccccHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCchHHHHHhhCcc
Q psy16064 51 GRSIGKIVGVLTLIATWGGGSYFTGTAESLFSTGLLWCQAPVGYSLTLVAGALIFAKPMRDAGY-ITMLDPFQKTYGRR 128 (515)
Q Consensus 51 GR~l~~~~~~~s~~at~~s~~~~ig~~g~~y~~G~~~~~~~~g~~~~~~l~~~~~a~~~rr~~~-~T~~e~~~~Rfg~~ 128 (515)
.|+++++-..+...++.+++..+..........|....+..+...+...+.++.+++.-++.+. -..++|.++.+|++
T Consensus 5 ~r~l~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~~~~~~~li~~~~~~~~~~~~~el~~~~P~~Gg~y~~~~~~~G~~ 83 (444)
T 3gia_A 5 NKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDN 83 (444)
T ss_dssp CCCBCHHHHHHHHHHHHHHHHTTTSHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHCSS
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHhHHHHhCcc
Confidence 5789999887777777777666555443333345433322222223344455566666666544 45889999999987
No 6
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=96.82 E-value=0.62 Score=48.96 Aligned_cols=94 Identities=11% Similarity=-0.050 Sum_probs=49.6
Q ss_pred CCCCChHHHHHHHHHhhhhhhhhccccHHHhhhhhHHH-HHHHHHHHHHHHHHHHHHHHHH--hcCCCCchHHHHHhhCc
Q psy16064 51 GRSIGKIVGVLTLIATWGGGSYFTGTAESLFSTGLLWC-QAPVGYSLTLVAGALIFAKPMR--DAGYITMLDPFQKTYGR 127 (515)
Q Consensus 51 GR~l~~~~~~~s~~at~~s~~~~ig~~g~~y~~G~~~~-~~~~g~~~~~~l~~~~~a~~~r--r~~~~T~~e~~~~Rfg~ 127 (515)
.|+++.+-..+-.+++.++ +.+.++ ....|.... |+.++..+..+..++-+++.-+ +.+.-..++|.++-+|+
T Consensus 10 ~r~l~~~~~~~l~~~~~ig---~~~~~~-~~~~G~~~~~~~~i~~~~~~l~~al~~ael~s~~~~P~GG~y~~~~~~~g~ 85 (511)
T 4djk_A 10 AKQLTLLGFFAITASMVMA---VYEYPT-FATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGP 85 (511)
T ss_dssp --CCCHHHHHHHTGGGGCC---GGGHHH-HHTTTTHHHHHHHHHHHHTHHHHHHHHHHHHTTSCC---CHHHHHHHHHCH
T ss_pred CccccHHHHHHHHHHHHHh---hchhHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCCChhhhHHhhcCc
Confidence 5888888766555555443 334443 234455443 2333333333335566667666 65545677888888888
Q ss_pred cchhHHHHHHHHHHHHHHHHH
Q psy16064 128 RIGGLLFLPALLGDMLYLSSV 148 (515)
Q Consensus 128 ~~~~l~ai~~ii~~~~~la~~ 148 (515)
+.+.+.+....+......+..
T Consensus 86 ~~g~~~g~~~~~~~~~~~~~~ 106 (511)
T 4djk_A 86 RWGFAAISFGYLQIAIGFIPM 106 (511)
T ss_dssp HHHHHHHHHHHHHHHHHTHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 776555555444444433333
No 7
>2wsw_A BCCT family betaine/carnitine/choline transporter; transport protein, SD methionine, membrane protein; HET: CM5 1PE; 2.29A {Proteus mirabilis} PDB: 2wsx_A* 3hfx_A*
Probab=95.78 E-value=2.6 Score=44.92 Aligned_cols=47 Identities=6% Similarity=-0.137 Sum_probs=29.8
Q ss_pred CccchHHHHHHHhCch--hHHHHHHHHHHHHHHHhHhHHHHhhhhhHHHH
Q psy16064 303 ESNSVLPLVLRYLTPG--WVTFFGLGAVSASVMSSADSVILGSGSMFTRN 350 (515)
Q Consensus 303 ~~d~~~p~~~~~~lp~--~l~gl~l~~llAA~mST~~s~l~~~ss~~~~D 350 (515)
+++.++..+.+++ |- .+..+.+..+.--...++||.....++.-+++
T Consensus 394 ~~~~alf~~l~~l-P~~~i~~~l~iil~~~FfvTSaDS~s~vi~~~ss~g 442 (509)
T 2wsw_A 394 GVPRAIIETWAAL-PLSTATMWGFFILCFIATVTLINACSYTLAMSTCRS 442 (509)
T ss_dssp CHHHHHHHHHHTS-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHBCC
T ss_pred ChhhHHHHHHHHC-ChHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcCC
Confidence 3455566666654 42 34444444455567789999888888877665
No 8
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=94.58 E-value=2.4 Score=45.48 Aligned_cols=49 Identities=18% Similarity=0.124 Sum_probs=29.6
Q ss_pred CCccchHHHHHHHhCc-hhHHHHHHHHHHHHHHHhHhHHHHhhhhhHHHH
Q psy16064 302 TESNSVLPLVLRYLTP-GWVTFFGLGAVSASVMSSADSVILGSGSMFTRN 350 (515)
Q Consensus 302 ~~~d~~~p~~~~~~lp-~~l~gl~l~~llAA~mST~~s~l~~~ss~~~~D 350 (515)
.|++.++..+.+++.- ..+..+.+..++.-...|+||.....++.-+++
T Consensus 394 ~~~~~alf~~l~~lP~~~i~~~l~iili~~FfvTSaDS~s~vl~~~ss~g 443 (539)
T 4ain_A 394 GAAEEQLFGLLHALPGGQIMGIIAMILLGTFFITSADSASTVMGTMSQHG 443 (539)
T ss_dssp SCHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTT
T ss_pred CCHhhHHHHHHHHCchHHHHHHHHHHHHHHHHHHccchHHHHHHHHHcCC
Confidence 3556666677765522 233344444445556678999888888776653
No 9
>3mp7_B Preprotein translocase subunit SECE; protein transport, membrane protein complex, preprotein TRAN membrane insertion,; 2.90A {Pyrococcus furiosus}
Probab=21.31 E-value=1.6e+02 Score=21.77 Aligned_cols=25 Identities=8% Similarity=0.089 Sum_probs=12.2
Q ss_pred hhhccCCCCChHHHHHHHHHHHHHHHH
Q psy16064 352 YHQSFRPKASEYELMWVLRLSILAASV 378 (515)
Q Consensus 352 ~~~~~~~~~s~k~~~~~~Ri~~~~v~~ 378 (515)
.++.-||+ .+|..+++|.+.+.+.+
T Consensus 19 lk~~~KPd--~~Ef~~iak~~~iG~~i 43 (61)
T 3mp7_B 19 FLVTKKPN--WATYKRAAKITGLGIIL 43 (61)
T ss_dssp HHHSCCCC--TTHHHHHHHHHHHHHHH
T ss_pred HHHhcCCC--HHHHHHHHHHHHHHHHH
Confidence 34434554 44555566655444333
No 10
>3rlb_A THIT; S-component, ECF transporter, ABC transporter, substrate-BIN domain, membrane, thiamine-binding protein; HET: BNG VIB; 2.00A {Lactococcus lactis subsp}
Probab=13.54 E-value=2.9e+02 Score=25.13 Aligned_cols=29 Identities=10% Similarity=0.055 Sum_probs=19.6
Q ss_pred HHHhhcCCCCC--hHHHHHHHHHHHHHHHHh
Q psy16064 410 VLVVHGANHVN--SYGCLSSVVIGILLRITG 438 (515)
Q Consensus 410 l~gl~wkr~~t--~~ga~~s~i~G~~~~~~~ 438 (515)
+.|+++||+.+ ...++.|.++|.+....+
T Consensus 104 laG~f~~~~~~~~~~~~~lg~~ig~~~r~~~ 134 (192)
T 3rlb_A 104 IAGLFRQKTAPLKLAPVLLGTFVAVLLKYFF 134 (192)
T ss_dssp GGGGGCCCSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhheeccccccHHHHHHHHHHHHHHHHHH
Confidence 34677776333 367888888888877654
Done!