Query psy16066
Match_columns 182
No_of_seqs 162 out of 221
Neff 4.4
Searched_HMMs 13730
Date Fri Aug 16 19:58:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16066.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16066hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1z0xa1 a.4.1.9 (A:4-71) Trans 52.0 7.7 0.00056 23.9 3.7 31 146-178 4-34 (68)
2 d1ufma_ a.4.5.47 (A:) COP9 sig 46.2 5.6 0.00041 26.3 2.4 30 145-178 12-41 (84)
3 d1jboa_ a.1.1.3 (A:) Phycocyan 40.3 53 0.0039 23.8 7.5 94 5-98 20-122 (162)
4 d1rz4a1 a.4.5.53 (A:132-216) E 40.3 13 0.00097 24.9 3.6 31 149-179 3-33 (85)
5 d1y74a1 a.194.1.1 (A:17-73) Li 38.5 6.7 0.00049 25.0 1.6 32 127-171 26-57 (57)
6 d2g7sa1 a.4.1.9 (A:3-76) Putat 37.5 18 0.0013 22.2 3.7 31 145-178 5-35 (74)
7 d1t56a1 a.4.1.9 (A:22-94) Ethr 34.2 21 0.0015 21.6 3.7 30 146-178 5-34 (73)
8 d2a7wa1 a.204.1.4 (A:4-94) Pho 33.7 61 0.0044 21.5 8.0 88 90-181 2-90 (91)
9 d1auaa1 a.5.3.1 (A:4-96) N-ter 33.6 32 0.0024 22.7 4.8 48 85-134 28-78 (93)
10 d1olma1 a.5.3.1 (A:1-75) Super 31.4 46 0.0033 20.6 5.1 48 85-134 10-61 (75)
11 d2iu5a1 a.4.1.9 (A:1-71) Trans 30.7 26 0.0019 21.3 3.7 30 146-178 8-37 (71)
12 d2f76x1 a.61.1.3 (X:1-94) Maso 30.4 12 0.00085 25.6 2.0 32 35-73 13-45 (94)
13 d1o0wa1 a.149.1.1 (A:-1-167) R 30.0 15 0.0011 26.2 2.8 26 106-131 128-153 (169)
14 d2g7ga1 a.4.1.9 (A:9-73) Putat 29.6 26 0.0019 21.2 3.5 28 146-178 3-30 (65)
15 d2fx0a1 a.4.1.9 (A:4-76) Hemol 29.1 30 0.0022 21.3 3.8 31 145-178 5-35 (73)
16 d2e2aa_ a.7.2.1 (A:) Enzyme II 27.9 15 0.0011 25.3 2.3 20 118-137 32-51 (104)
17 d2gfna1 a.4.1.9 (A:4-80) Proba 27.5 33 0.0024 20.9 3.8 31 145-178 7-37 (77)
18 d2gena1 a.4.1.9 (A:6-75) Proba 26.9 33 0.0024 20.5 3.6 30 146-178 2-31 (70)
19 d1nf1a_ a.116.1.2 (A:) GAP rel 26.6 37 0.0027 26.7 4.8 57 73-134 184-258 (324)
20 d2o7ta1 a.4.1.9 (A:1-78) Trans 26.2 34 0.0025 21.1 3.7 30 146-178 9-38 (78)
21 d2np5a1 a.4.1.9 (A:9-77) Trans 26.0 40 0.0029 20.0 3.9 30 146-178 3-32 (69)
22 d1rkta1 a.4.1.9 (A:2-82) Hypot 25.4 37 0.0027 20.9 3.8 31 145-178 12-42 (81)
23 d2fd5a1 a.4.1.9 (A:1-76) Proba 25.2 38 0.0028 20.5 3.8 30 146-178 9-38 (76)
24 d2g7la1 a.4.1.9 (A:16-83) Puta 25.0 37 0.0027 20.4 3.6 30 146-178 6-35 (68)
25 d1td6a_ a.234.1.1 (A:) Hypothe 24.5 93 0.0068 24.8 6.8 44 106-152 33-83 (286)
26 d1pb6a1 a.4.1.9 (A:14-85) Hypo 23.2 47 0.0035 20.0 3.9 32 144-178 4-35 (72)
27 d1d5ya1 a.4.1.8 (A:3-56) Rob t 22.9 20 0.0014 20.8 1.8 29 147-178 2-30 (54)
28 d1sgma1 a.4.1.9 (A:5-77) Putat 22.9 43 0.0031 20.1 3.6 31 145-178 3-33 (73)
29 d1jt6a1 a.4.1.9 (A:2-72) Multi 22.0 43 0.0032 20.1 3.5 31 145-178 2-32 (71)
30 d2fbqa1 a.4.1.9 (A:2-80) Trans 22.0 48 0.0035 20.1 3.8 31 145-178 5-35 (79)
31 d2o3la1 a.69.4.1 (A:14-95) Hyp 21.9 18 0.0013 23.9 1.6 35 121-157 48-82 (82)
32 d1vi0a1 a.4.1.9 (A:6-77) Hypot 21.8 51 0.0037 19.7 3.8 31 145-178 2-32 (72)
33 d1zk8a1 a.4.1.9 (A:6-77) Trans 21.7 53 0.0039 19.7 3.9 30 146-178 5-34 (72)
34 d2cw9a1 d.17.4.13 (A:270-451) 21.1 29 0.0021 25.2 2.8 62 109-178 14-75 (182)
35 d2i15a1 a.291.1.1 (A:1-129) Hy 21.1 1.2E+02 0.009 20.8 7.3 36 144-181 88-123 (129)
36 d3c07a1 a.4.1.9 (A:15-89) Puta 20.6 52 0.0038 19.6 3.7 31 145-178 6-36 (75)
37 d1ui5a1 a.4.1.9 (A:5-75) A-fac 20.6 55 0.004 19.7 3.8 30 146-178 7-36 (71)
38 d1xg0c_ a.1.1.3 (C:) Phycoeryt 20.5 1.2E+02 0.0084 22.2 6.3 47 63-116 77-129 (175)
39 d2id3a1 a.4.1.9 (A:13-80) Puta 20.2 60 0.0044 19.3 3.9 31 145-178 7-37 (68)
No 1
>d1z0xa1 a.4.1.9 (A:4-71) Transcriptional regulator EF0787 {Enterococcus faecalis [TaxId: 1351]}
Probab=52.00 E-value=7.7 Score=23.91 Aligned_cols=31 Identities=13% Similarity=0.157 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 146 LDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 146 ~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
++.++++|..++.|+. =...+++++||++.|
T Consensus 4 r~~Ii~aa~~l~~e~~--G~~~~t~~~Ia~~ag 34 (68)
T d1z0xa1 4 KDTIIAAAFSLLEKSP--TLEQLSMRKVAKQLG 34 (68)
T ss_dssp HHHHHHHHHHHHHHSC--CGGGCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcC--CccccCHHHHHHHHC
Confidence 6889999999998741 127899999999987
No 2
>d1ufma_ a.4.5.47 (A:) COP9 signalosome complex subunit 4, GSN4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=46.24 E-value=5.6 Score=26.31 Aligned_cols=30 Identities=10% Similarity=0.186 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 145 CLDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 145 ~~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
+.+.++|+.-..+.+.| .+|+++.||+.|+
T Consensus 12 L~~~i~Ehni~~is~~Y----~~Isl~~la~~l~ 41 (84)
T d1ufma_ 12 LDRAVIEHNLLSASKLY----NNITFEELGALLE 41 (84)
T ss_dssp CCHHHHHHHHHHHHHSC----SEEEHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhh----ceeeHHHHHHHHC
Confidence 35678898888877776 5568999999886
No 3
>d1jboa_ a.1.1.3 (A:) Phycocyanin alpha subunit {Synechococcus elongatus [TaxId: 32046]}
Probab=40.32 E-value=53 Score=23.79 Aligned_cols=94 Identities=9% Similarity=0.082 Sum_probs=48.2
Q ss_pred ChhhHHHHhhhchHHHHHHHHHHHHcccchhhhHHHHHHHhhhchhHHH---HHHhCChhhhHHHHhhchhHHHHHHHHH
Q psy16066 5 RPHYLNAIQTMCPHILRYLATAVIINRSKRNALKDLVKVIQQVSRDLII---DMFLNRPHYLNAIQTMCPHILRYLATAV 81 (182)
Q Consensus 5 ~~~ylnaiQt~~p~lLRYl~~avi~~~~r~~~lkdlVrvIqqEgrd~i~---d~Fl~~~~Yln~IQt~cPhlLRYla~Av 81 (182)
++.=|+.|++-+..--.=+.+|=+++..-...+++-..-+.++..+.+- ..+-+++.-.++-.--|-|.|||.+-|+
T Consensus 20 s~~EL~~l~~y~~~~~~Rl~aa~~L~~na~~IV~~A~~~l~~~~P~l~~~gG~~y~~~~~r~~~C~RD~~~~LR~itYa~ 99 (162)
T d1jboa_ 20 SNTELQAVDGRFKRAVASMEAARALTNNAQSLIDGAAQAVYQKFPYTTTMQGSQYASTPEGKAKCARDIGYYLRMVTYCL 99 (162)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCGGGGTSCSTTSSSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666555544444444444333334444443433333222110 0011123445666677899999999999
Q ss_pred Hhhhch------hHHHHHHHHHH
Q psy16066 82 IINRSK------RNALKDLVKVI 98 (182)
Q Consensus 82 I~nr~r------r~~lkdlv~vI 98 (182)
+.+... =.-++++.+.+
T Consensus 100 lagd~~~l~~~~l~glre~y~sl 122 (162)
T d1jboa_ 100 VAGGTGPMDEYLIAGLSEINSTF 122 (162)
T ss_dssp HHTSSHHHHHHTTTTHHHHHHHH
T ss_pred HhCCchhhhHHHHHHHHHHHHHh
Confidence 987422 13455555555
No 4
>d1rz4a1 a.4.5.53 (A:132-216) Eukaryotic translation initiation factor 3 subunit 12, eIF3k, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.26 E-value=13 Score=24.93 Aligned_cols=31 Identities=16% Similarity=0.135 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhhhhcccccHHHHHhHhhh
Q psy16066 149 FVENARLMIFETFCRIHQCISIQKESNVIDK 179 (182)
Q Consensus 149 f~e~AR~lIfEtYCrIH~~I~I~~la~~L~~ 179 (182)
|.|+-|.+|.-+---.+++|+...|++-||-
T Consensus 3 FedsIR~~i~~vv~iTyq~I~~~~L~e~LG~ 33 (85)
T d1rz4a1 3 FEDSVRKFICHVVGITYQHIDRWLLAEMLGD 33 (85)
T ss_dssp HHHHHHHHHHHHHHHHCSEECHHHHHHHTTS
T ss_pred HHHHHHHHHHhheeeeeeEEcHHHHHHHhCC
Confidence 7888899888888888899999999999974
No 5
>d1y74a1 a.194.1.1 (A:17-73) Lin-7 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.50 E-value=6.7 Score=24.96 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=24.0
Q ss_pred HHHHHHHhhhhcccchhhhHHHHHHHHHHHHHHHhhhhcccccHH
Q psy16066 127 EKLTECTEVLDNDFFLVACLDEFVENARLMIFETFCRIHQCISIQ 171 (182)
Q Consensus 127 ~~L~~~e~v~~~DfFL~~~~~~f~e~AR~lIfEtYCrIH~~I~I~ 171 (182)
.+|....+|+.+||+= .|=|.|=-+|..|||+
T Consensus 26 ~KL~aLqkVLqSdF~~-------------avREVYehvyeTvdi~ 57 (57)
T d1y74a1 26 QKLQALQRVLQSRFCS-------------AIREVYEQLYDTLDIT 57 (57)
T ss_dssp HHHHHHHHHHHSHHHH-------------HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH-------------HHHHHHHHHHhhcCCC
Confidence 4677788899999863 3557888888888773
No 6
>d2g7sa1 a.4.1.9 (A:3-76) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=37.52 E-value=18 Score=22.20 Aligned_cols=31 Identities=23% Similarity=0.247 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 145 CLDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 145 ~~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
-++.+++.|..++-| +=+..+++++||++.|
T Consensus 5 ~r~~Il~aa~~l~~~---~G~~~~s~~~Ia~~ag 35 (74)
T d2g7sa1 5 KADDILQCARTLIIR---GGYNSFSYADISQVVG 35 (74)
T ss_dssp HHHHHHHHHHHHHHH---HCGGGCCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH---hCccccCHHHHHHHHC
Confidence 478899999998887 5578999999999886
No 7
>d1t56a1 a.4.1.9 (A:22-94) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=34.21 E-value=21 Score=21.59 Aligned_cols=30 Identities=13% Similarity=0.039 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 146 LDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 146 ~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
+..++++|..++-| +=+..+++++||++.|
T Consensus 5 r~~Il~aa~~l~~~---~G~~~~t~~~Ia~~ag 34 (73)
T d1t56a1 5 ELAILATAENLLED---RPLADISVDDLAKGAG 34 (73)
T ss_dssp HHHHHHHHHHHHHH---SCGGGCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH---hCcccCCHHHHHHHhC
Confidence 56789999988887 6678999999999886
No 8
>d2a7wa1 a.204.1.4 (A:4-94) Phosphoribosyl-ATP pyrophosphatase HisE {Chromobacterium violaceum [TaxId: 536]}
Probab=33.69 E-value=61 Score=21.51 Aligned_cols=88 Identities=11% Similarity=0.046 Sum_probs=58.8
Q ss_pred HHHHHHHHHhhccccCCCcHHHHHHHHhhccchHHHHHHHHHHHhhhhcccchhhhHHH-HHHHHHHHHHHHhhhhcccc
Q psy16066 90 ALKDLVKVIQQESYTYKDPITEFLEHLYVSFDFESAREKLTECTEVLDNDFFLVACLDE-FVENARLMIFETFCRIHQCI 168 (182)
Q Consensus 90 ~lkdlv~vI~qe~y~Y~DPiTeFl~~L~v~fDFe~Aq~~L~~~e~v~~~DfFL~~~~~~-f~e~AR~lIfEtYCrIH~~I 168 (182)
.|..+.++|.+-.-. +|=.++...|+-+=.=.-|++...|+.+++.. ....-+++ .-|.|-++..=.-.-.++.|
T Consensus 2 iL~~L~~~i~~Rk~~--~~~~SYt~~L~~~G~~~i~kKigEEa~E~i~A--~~~~~~~~vi~EaADLlyHllVlL~~~gi 77 (91)
T d2a7wa1 2 VLKNIADTLEARREA--APQSSYVASLFHKGEDAILKKVAEEAAETLMA--SKDKDKLHLVREVADLWFHTMVLLTYHGL 77 (91)
T ss_dssp CHHHHHHHHHHGGGS--CTTTCHHHHHHHHCHHHHHHHHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcC--CCcccHHHHHHhCChHHHHHHHHHHHHHHHHH--HHhCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 467788888776644 88899999997542223366666666665543 12222444 45666666555566678999
Q ss_pred cHHHHHhHhhhhc
Q psy16066 169 SIQKESNVIDKIF 181 (182)
Q Consensus 169 ~I~~la~~L~~~~ 181 (182)
+++++.+.|.+=|
T Consensus 78 ~~~dV~~eL~~R~ 90 (91)
T d2a7wa1 78 RPEDVVMELHRRE 90 (91)
T ss_dssp CHHHHHHHHHHHC
T ss_pred CHHHHHHHHHhcC
Confidence 9999999998754
No 9
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.56 E-value=32 Score=22.70 Aligned_cols=48 Identities=25% Similarity=0.532 Sum_probs=33.5
Q ss_pred hchhHHHHHHHHHHhhcccc--CCCcH-HHHHHHHhhccchHHHHHHHHHHHh
Q psy16066 85 RSKRNALKDLVKVIQQESYT--YKDPI-TEFLEHLYVSFDFESAREKLTECTE 134 (182)
Q Consensus 85 r~rr~~lkdlv~vI~qe~y~--Y~DPi-TeFl~~L~v~fDFe~Aq~~L~~~e~ 134 (182)
...+..|.++-..|..+... +.|.+ ..||.+ -+||.++|.++|.+.-+
T Consensus 28 ~~q~~~L~elr~~l~~~~~~~~~DD~~llRfLrA--r~fd~~~a~~ml~~~l~ 78 (93)
T d1auaa1 28 SAQEKALAELRKLLEDAGFIERLDDSTLLRFLRA--RKFDVQLAKEMFENCEK 78 (93)
T ss_dssp TTHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHH--TTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH--ccCCHHHHHHHHHHHHH
Confidence 34456677777777665432 34544 788887 79999999999987653
No 10
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.39 E-value=46 Score=20.60 Aligned_cols=48 Identities=21% Similarity=0.272 Sum_probs=30.0
Q ss_pred hchhHHHHHHHHHHhhccc---cCCCcH-HHHHHHHhhccchHHHHHHHHHHHh
Q psy16066 85 RSKRNALKDLVKVIQQESY---TYKDPI-TEFLEHLYVSFDFESAREKLTECTE 134 (182)
Q Consensus 85 r~rr~~lkdlv~vI~qe~y---~Y~DPi-TeFl~~L~v~fDFe~Aq~~L~~~e~ 134 (182)
..++..+.++-..++.... .+.|.. ..||.+ -+||-++|.++|.++-+
T Consensus 10 ~~q~~~l~elr~~l~~~~~~~~~~dd~~LlRFLrA--r~fdv~kA~~ml~~~l~ 61 (75)
T d1olma1 10 PRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRA--RSFDLQKSEAMLRKHVE 61 (75)
T ss_dssp HHHHHHHHHHHHHHGGGGGGSSCCCHHHHHHHHHH--TTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHH--CCCCHHHHHHHHHHHHH
Confidence 3445566666666654322 223333 566655 59999999999988754
No 11
>d2iu5a1 a.4.1.9 (A:1-71) Transcriptional activator DhaS {Lactococcus lactis [TaxId: 1358]}
Probab=30.72 E-value=26 Score=21.30 Aligned_cols=30 Identities=7% Similarity=0.001 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 146 LDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 146 ~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
++.++++|+.++.| +=+..++++++|++.|
T Consensus 8 ~~~I~~aa~~l~~~---~G~~~~sv~~Ia~~ag 37 (71)
T d2iu5a1 8 QKIIAKAFKDLMQS---NAYHQISVSDIMQTAK 37 (71)
T ss_dssp HHHHHHHHHHHHHH---SCGGGCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH---cCcccCCHHHHHHHhC
Confidence 57789999999888 5578999999999987
No 12
>d2f76x1 a.61.1.3 (X:1-94) Mason-Pfizer monkey virus matrix protein {Simian Mason-Pfizer virus [TaxId: 11855]}
Probab=30.44 E-value=12 Score=25.57 Aligned_cols=32 Identities=19% Similarity=0.400 Sum_probs=19.4
Q ss_pred hhhHHHHHHHhhh-chhHHHHHHhCChhhhHHHHhhchhH
Q psy16066 35 NALKDLVKVIQQV-SRDLIIDMFLNRPHYLNAIQTMCPHI 73 (182)
Q Consensus 35 ~~lkdlVrvIqqE-grd~i~d~Fl~~~~Yln~IQt~cPhl 73 (182)
+.||++.|.-.-+ +++.+.. |+ ..|...|||.
T Consensus 13 ~~Lk~lLk~rGvkV~~~~L~~-f~------~~I~~~cPWF 45 (94)
T d2f76x1 13 EQLKQALKTRGVKVKYADLLK-FF------DFVKDTCPWF 45 (94)
T ss_dssp HHHHHHHHTTTCCCCHHHHHH-HH------HHHHHHCCCC
T ss_pred HHHHHHHHHCCeecCHHHHHH-HH------HHHHHhCCCc
Confidence 3455555444333 4556665 44 5899999985
No 13
>d1o0wa1 a.149.1.1 (A:-1-167) RNase III endonuclease catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=30.04 E-value=15 Score=26.17 Aligned_cols=26 Identities=19% Similarity=0.474 Sum_probs=21.4
Q ss_pred CCcHHHHHHHHhhccchHHHHHHHHH
Q psy16066 106 KDPITEFLEHLYVSFDFESAREKLTE 131 (182)
Q Consensus 106 ~DPiTeFl~~L~v~fDFe~Aq~~L~~ 131 (182)
.|-+-.++.++|+|-+|+.|++-+.+
T Consensus 128 ad~~EAliGAiylD~G~~~~~~~i~~ 153 (169)
T d1o0wa1 128 ADAFEALLAAIYLDQGYEKIKELFEQ 153 (169)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 36678899999999999999876643
No 14
>d2g7ga1 a.4.1.9 (A:9-73) Putative transcriptional regulator Rha04620 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=29.61 E-value=26 Score=21.25 Aligned_cols=28 Identities=7% Similarity=0.068 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 146 LDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 146 ~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
++.+++.|.-++.|- ..+++.+||++.|
T Consensus 3 R~~Il~aa~~l~~~~-----G~~ti~~Ia~~ag 30 (65)
T d2g7ga1 3 RERIAEAALELVDRD-----GDFRMPDLARHLN 30 (65)
T ss_dssp HHHHHHHHHHHHHHH-----SSCCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHc-----CCCCHHHHHHHhC
Confidence 578999999888873 3799999999876
No 15
>d2fx0a1 a.4.1.9 (A:4-76) Hemolysin II regulatory protein, HlyIIR {Bacillus cereus [TaxId: 1396]}
Probab=29.07 E-value=30 Score=21.29 Aligned_cols=31 Identities=19% Similarity=0.161 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 145 CLDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 145 ~~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
.++.+++.|..++.| +=+..+++.+||++.|
T Consensus 5 tr~~Il~aa~~l~~~---~G~~~~si~~Ia~~ag 35 (73)
T d2fx0a1 5 TMENILKAAKKKFGE---RGYEGTSIQEIAKEAK 35 (73)
T ss_dssp HHHHHHHHHHHHHHH---HCTTTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH---hCcccCcHHHHHHHHC
Confidence 467899999999988 5578999999999876
No 16
>d2e2aa_ a.7.2.1 (A:) Enzyme IIa from lactose specific PTS, IIa-lac {Lactococcus lactis [TaxId: 1358]}
Probab=27.86 E-value=15 Score=25.30 Aligned_cols=20 Identities=20% Similarity=0.223 Sum_probs=16.6
Q ss_pred hccchHHHHHHHHHHHhhhh
Q psy16066 118 VSFDFESAREKLTECTEVLD 137 (182)
Q Consensus 118 v~fDFe~Aq~~L~~~e~v~~ 137 (182)
-+-||++|.++|+++++.+.
T Consensus 32 k~gdfe~A~~~l~eA~e~l~ 51 (104)
T d2e2aa_ 32 ENGDFAKADSLVVEAGSCIA 51 (104)
T ss_dssp HTTCHHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHH
Confidence 46799999999999987653
No 17
>d2gfna1 a.4.1.9 (A:4-80) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=27.51 E-value=33 Score=20.94 Aligned_cols=31 Identities=3% Similarity=-0.025 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 145 CLDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 145 ~~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
-++.++++|..++.| +=...+++.+||+++|
T Consensus 7 ~r~~Il~aa~~l~~~---~G~~~~s~~~Ia~~ag 37 (77)
T d2gfna1 7 RRRALADAVLALIAR---EGISAVTTRAVAEESG 37 (77)
T ss_dssp HHHHHHHHHHHHHHH---HCGGGCCHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHH---hCccccCHHHHHHHHC
Confidence 367899999888877 4468999999999886
No 18
>d2gena1 a.4.1.9 (A:6-75) Probable transcriptional regulator PA1836 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=26.86 E-value=33 Score=20.48 Aligned_cols=30 Identities=17% Similarity=0.076 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 146 LDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 146 ~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
++.+++.|..++-| +=+..+++++||++.|
T Consensus 2 R~~il~aa~~l~~~---~G~~~~si~~Ia~~ag 31 (70)
T d2gena1 2 KDEILQAALACFSE---HGVDATTIEMIRDRSG 31 (70)
T ss_dssp HHHHHHHHHHHHHH---HCTTTCCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH---hCcccCCHHHHHHHHC
Confidence 46788999988877 5568999999999876
No 19
>d1nf1a_ a.116.1.2 (A:) GAP related domain of neurofibromin {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.63 E-value=37 Score=26.68 Aligned_cols=57 Identities=21% Similarity=0.391 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhh-----------hchhHHHHHHHHHHhhcc-------ccCCCcHHHHHHHHhhccchHHHHHHHHHHHh
Q psy16066 73 ILRYLATAVIIN-----------RSKRNALKDLVKVIQQES-------YTYKDPITEFLEHLYVSFDFESAREKLTECTE 134 (182)
Q Consensus 73 lLRYla~AvI~n-----------r~rr~~lkdlv~vI~qe~-------y~Y~DPiTeFl~~L~v~fDFe~Aq~~L~~~e~ 134 (182)
.|||++-|++-- .+.++.|..+.+++|+=. ..|--|+.+|+ ...++...+-+.++..
T Consensus 184 flRfi~PAI~sP~~~gl~~~~~~~~~rr~L~~iaKvLQ~lan~~~f~ke~~m~~ln~fi-----~~~~~~~~~fl~~i~~ 258 (324)
T d1nf1a_ 184 FLRFINPAIVSPYEAGILDKKPPPIIERGLKLMSKILQSIANHVLFTKEEHMRPFNDFV-----KSNFDAARRFFLDIAS 258 (324)
T ss_dssp HHHTHHHHHHCTTCC--------CHHHHHHHTHHHHHHHHHHTCCCCSSTTSGGGHHHH-----HHTHHHHHHHHHHTTC
T ss_pred HHHHhCcccCCHHHcCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHHHH-----HHHHHHHHHHHHHHhC
Confidence 367776555421 123567777888887622 22334444444 4445555555555543
No 20
>d2o7ta1 a.4.1.9 (A:1-78) Transcriptional regulator Cgl1640/Cg1846 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=26.19 E-value=34 Score=21.11 Aligned_cols=30 Identities=3% Similarity=0.119 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 146 LDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 146 ~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
++.+++.|..++.|- =+..+++.+||++.|
T Consensus 9 r~~Il~aa~~l~~~~---G~~~~t~~~Ia~~ag 38 (78)
T d2o7ta1 9 REHIITTTCNLYRTH---HHDSLTMENIAEQAG 38 (78)
T ss_dssp HHHHHHHHHHHHHHS---CGGGCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh---CccccCHHHHHHHhC
Confidence 578999999888873 358999999999876
No 21
>d2np5a1 a.4.1.9 (A:9-77) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]}
Probab=26.00 E-value=40 Score=20.00 Aligned_cols=30 Identities=7% Similarity=-0.065 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 146 LDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 146 ~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
++.+++.|..++-| +=...+++.+||++.|
T Consensus 3 ~e~i~~aa~~l~~~---~G~~~~ti~~Ia~~ag 32 (69)
T d2np5a1 3 PERLAAALFDVAAE---SGLEGASVREVAKRAG 32 (69)
T ss_dssp HHHHHHHHHHHHHH---HCGGGCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH---hCccccCHHHHHHHhC
Confidence 67889999888877 4568999999999886
No 22
>d1rkta1 a.4.1.9 (A:2-82) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]}
Probab=25.40 E-value=37 Score=20.87 Aligned_cols=31 Identities=10% Similarity=0.080 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 145 CLDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 145 ~~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
-++.++++|..+|-| +=+..+++++||++.|
T Consensus 12 ~r~~Il~aa~~l~~~---~G~~~~ti~~Ia~~ag 42 (81)
T d1rkta1 12 RQAEILEAAKTVFKR---KGFELTTMKDVVEESG 42 (81)
T ss_dssp HHHHHHHHHHHHHHH---HCSTTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH---hCcccCCHHHHHHHhC
Confidence 367899999999777 3478999999999886
No 23
>d2fd5a1 a.4.1.9 (A:1-76) Probable transcriptional regulator PA3133 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.22 E-value=38 Score=20.49 Aligned_cols=30 Identities=10% Similarity=-0.027 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 146 LDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 146 ~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
++.+++.|..++.|. =+..+++++||++.|
T Consensus 9 r~~Il~aa~~l~~~~---G~~~~si~~Ia~~ag 38 (76)
T d2fd5a1 9 RARILGAATQALLER---GAVEPSVGEVMGAAG 38 (76)
T ss_dssp HHHHHHHHHHHHHHH---TTTSCCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHh---CcccccHHHHHHHhC
Confidence 678999999888774 468999999999876
No 24
>d2g7la1 a.4.1.9 (A:16-83) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Probab=24.97 E-value=37 Score=20.43 Aligned_cols=30 Identities=10% Similarity=0.118 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 146 LDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 146 ~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
++.++++|.-++-|. =...+++++||+++|
T Consensus 6 r~~Il~aa~~l~~~~---g~~~~si~~ia~~~g 35 (68)
T d2g7la1 6 RRWIVDTAVALMRAE---GLEKVTMRRLAQELD 35 (68)
T ss_dssp HHHHHHHHHHHHHHH---CSSSCCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHh---CcccCCHHHHHHHHC
Confidence 678899999888773 368999999999986
No 25
>d1td6a_ a.234.1.1 (A:) Hypothetical protein MPN330 {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=24.55 E-value=93 Score=24.76 Aligned_cols=44 Identities=25% Similarity=0.432 Sum_probs=34.6
Q ss_pred CCcHHHHHHHHh-------hccchHHHHHHHHHHHhhhhcccchhhhHHHHHHH
Q psy16066 106 KDPITEFLEHLY-------VSFDFESAREKLTECTEVLDNDFFLVACLDEFVEN 152 (182)
Q Consensus 106 ~DPiTeFl~~L~-------v~fDFe~Aq~~L~~~e~v~~~DfFL~~~~~~f~e~ 152 (182)
.|-.|.|-++++ -+=||.+|++ .|++.+.+||.=.++-++|.++
T Consensus 33 ~DqlT~fyl~~l~kv~~lvk~Kdfk~Al~---~~~eELdspYlP~~lis~F~~a 83 (286)
T d1td6a_ 33 GDELTTFFLHQFDKVMELVKQKDFKTAQS---RCEEELAAPYLPKPLVSFFQSL 83 (286)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTTCHHHHHH---HHHHHTTCTTSCHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHhhhhHHHHHH---HHHHHhcCCccchhHHHHHHHH
Confidence 699999976654 4678998875 5889999999987777777654
No 26
>d1pb6a1 a.4.1.9 (A:14-85) Hypothetical transcriptional regulator YcdC {Escherichia coli [TaxId: 562]}
Probab=23.23 E-value=47 Score=20.02 Aligned_cols=32 Identities=6% Similarity=-0.068 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 144 ACLDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 144 ~~~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
.-+++++++|..++-| +=+..+++.+||++.|
T Consensus 4 ~rr~~Il~aa~~l~~~---~G~~~~ti~~Ia~~ag 35 (72)
T d1pb6a1 4 AKKKAILSAALDTFSQ---FGFHGTRLEQIAELAG 35 (72)
T ss_dssp HHHHHHHHHHHHHHHH---HCTTTCCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHH---hCccccCHHHHHHHhC
Confidence 3467899999988888 4568999999999876
No 27
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.94 E-value=20 Score=20.80 Aligned_cols=29 Identities=7% Similarity=0.115 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 147 DEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 147 ~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
.++++.+..+|=+.| ++.|++++||+.+|
T Consensus 2 ~~ii~~i~~yi~~~~---~~~itl~~lA~~~~ 30 (54)
T d1d5ya1 2 AGIIRDLLIWLEGHL---DQPLSLDNVAAKAG 30 (54)
T ss_dssp HHHHHHHHHHHHTTS---SSSCCCHHHHTTTS
T ss_pred HHHHHHHHHHHHHcc---CCCCCHHHHHHHHC
Confidence 357777888887765 88999999998765
No 28
>d1sgma1 a.4.1.9 (A:5-77) Putative transcriptional regulator YxaF {Bacillus subtilis [TaxId: 1423]}
Probab=22.85 E-value=43 Score=20.13 Aligned_cols=31 Identities=3% Similarity=-0.041 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 145 CLDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 145 ~~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
-++.+++.|..++-+ +=++.+++++||+..|
T Consensus 3 tr~~Il~aa~~l~~~---~G~~~~si~~Ia~~ag 33 (73)
T d1sgma1 3 SREKILHTASRLSQL---QGYHATGLNQIVKESG 33 (73)
T ss_dssp HHHHHHHHHHHHHHH---HCTTTCCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH---hCcccCCHHHHHHHhC
Confidence 367888888888776 4578999999999876
No 29
>d1jt6a1 a.4.1.9 (A:2-72) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=22.05 E-value=43 Score=20.06 Aligned_cols=31 Identities=6% Similarity=0.064 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 145 CLDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 145 ~~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
.++.+++.|..++-|. =...+++.+||++.|
T Consensus 2 ~r~~Il~aa~~l~~~~---G~~~~s~~~Ia~~ag 32 (71)
T d1jt6a1 2 LKDKILGVAKELFIKN---GYNATTTGEIVKLSE 32 (71)
T ss_dssp HHHHHHHHHHHHHHHH---CTTTCCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHh---CccccCHHHHHHHHC
Confidence 4678899998888874 467999999999876
No 30
>d2fbqa1 a.4.1.9 (A:2-80) Transcriptional regulator PsrA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=21.97 E-value=48 Score=20.14 Aligned_cols=31 Identities=10% Similarity=0.130 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 145 CLDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 145 ~~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
-++.+++.|..++-| +=+..+++++||++.|
T Consensus 5 tre~Il~aa~~~~~~---~G~~~~ti~~Ia~~ag 35 (79)
T d2fbqa1 5 TVERILDAAEQLFAE---KGFAETSLRLITSKAG 35 (79)
T ss_dssp HHHHHHHHHHHHHHH---HCSTTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH---hCcccccHHHHHHHHC
Confidence 367888999888876 3458899999999886
No 31
>d2o3la1 a.69.4.1 (A:14-95) Hypothetical protein BCE3448 {Bacillus cereus [TaxId: 1396]}
Probab=21.90 E-value=18 Score=23.90 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=29.7
Q ss_pred chHHHHHHHHHHHhhhhcccchhhhHHHHHHHHHHHH
Q psy16066 121 DFESAREKLTECTEVLDNDFFLVACLDEFVENARLMI 157 (182)
Q Consensus 121 DFe~Aq~~L~~~e~v~~~DfFL~~~~~~f~e~AR~lI 157 (182)
.|++||+.=+.+++|+..|. ....|+++.+++-.|
T Consensus 48 l~eea~~~G~~v~ev~G~D~--~~f~deli~~~k~~~ 82 (82)
T d2o3la1 48 LFEAGAAEGRQVLDITGEDV--ASFADELVANAKTYV 82 (82)
T ss_dssp HHHHHHHHTCCHHHHHCSCH--HHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCHHHHhCCCH--HHHHHHHHHhccccC
Confidence 57899999999999999996 778899999887653
No 32
>d1vi0a1 a.4.1.9 (A:6-77) Hypothetical transcriptional regulator YsiA {Bacillus subtilis [TaxId: 1423]}
Probab=21.76 E-value=51 Score=19.66 Aligned_cols=31 Identities=13% Similarity=0.015 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 145 CLDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 145 ~~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
-++.+++.|..++.| +=+..+++++||++.|
T Consensus 2 r~~~Il~aa~~l~~~---~G~~~~ti~~Ia~~ag 32 (72)
T d1vi0a1 2 KYMQIIDAAVEVIAE---NGYHQSQVSKIAKQAG 32 (72)
T ss_dssp HHHHHHHHHHHHHHH---HCGGGCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH---hCcccccHHHHHHHHC
Confidence 367889999988877 4568899999999876
No 33
>d1zk8a1 a.4.1.9 (A:6-77) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=21.69 E-value=53 Score=19.66 Aligned_cols=30 Identities=17% Similarity=0.152 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 146 LDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 146 ~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
++.+++.|..++-| +=+..++++++|+++|
T Consensus 5 ~e~Il~aa~~l~~~---~G~~~~t~~~Ia~~ag 34 (72)
T d1zk8a1 5 LQKIVETAAEIADA---NGVQEVTLASLAQTLG 34 (72)
T ss_dssp HHHHHHHHHHHHHH---HCGGGCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH---hCCCcccHHHHHHHhC
Confidence 67888888888877 4568899999999987
No 34
>d2cw9a1 d.17.4.13 (A:270-451) Translocase of inner mitochondrial membrane TIMM44 (TIM44), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.10 E-value=29 Score=25.24 Aligned_cols=62 Identities=11% Similarity=0.140 Sum_probs=39.6
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHhhhhcccchhhhHHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 109 ITEFLEHLYVSFDFESAREKLTECTEVLDNDFFLVACLDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 109 iTeFl~~L~v~fDFe~Aq~~L~~~e~v~~~DfFL~~~~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
++++...|+-+-+...+.+.+++.+. || -.++|++.||.-+||..-.-+..=|++.|...|+
T Consensus 14 v~~~~~~~~~~~~~~~~l~~i~~~Dp----~F----~~~~Fl~gAk~~~~~~i~~A~~~gD~~~L~~llt 75 (182)
T d2cw9a1 14 VTDLLGGLFSKTEMSEVLTEILRVDP----AF----DKDRFLKQCENDIIPNVLEAMISGELDILKDWCY 75 (182)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHHHCT----TC----CHHHHHHHHHHTHHHHHHHHHHHTCHHHHHHHBC
T ss_pred hhhhhcCCCCCCHHHHHHHHHHhhCC----CC----CHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHhh
Confidence 45566666666666666666665443 33 2577888888766776666666677777766554
No 35
>d2i15a1 a.291.1.1 (A:1-129) Hypothetical protein MPN423 {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=21.09 E-value=1.2e+02 Score=20.83 Aligned_cols=36 Identities=22% Similarity=0.402 Sum_probs=27.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcccccHHHHHhHhhhhc
Q psy16066 144 ACLDEFVENARLMIFETFCRIHQCISIQKESNVIDKIF 181 (182)
Q Consensus 144 ~~~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~~~~ 181 (182)
+|-..|.|+-.++|+. .-|-+.+|.+.--+.|||-|
T Consensus 88 sccqsfyealtlfisa--laitkgvdvgryhqqlgkrf 123 (129)
T d2i15a1 88 SCCQSFYEALTLFISA--LAITKGVDVGRYHQQLGKRF 123 (129)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHTTCCTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH--HHHHcccchhHHHHHHhhhc
Confidence 4555677777766654 46889999999889999876
No 36
>d3c07a1 a.4.1.9 (A:15-89) Putative transcriptional regulator SCO4850 {Streptomyces coelicolor [TaxId: 1902]}
Probab=20.57 E-value=52 Score=19.64 Aligned_cols=31 Identities=10% Similarity=-0.027 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 145 CLDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 145 ~~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
-++.+++.|..++.|. =+..+++.+||++.|
T Consensus 6 tr~~Il~aa~~l~~~~---G~~~~t~~~Ia~~ag 36 (75)
T d3c07a1 6 TRALILETAMRLFQER---GYDRTTMRAIAQEAG 36 (75)
T ss_dssp HHHHHHHHHHHHHHHT---CSTTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh---CcccCCHHHHHHHHC
Confidence 3678899999888873 468999999999876
No 37
>d1ui5a1 a.4.1.9 (A:5-75) A-factor receptor homolog CprB {Streptomyces coelicolor [TaxId: 1902]}
Probab=20.55 E-value=55 Score=19.65 Aligned_cols=30 Identities=7% Similarity=-0.041 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 146 LDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 146 ~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
++.+++.|..++-| +=+..+++.+||++.|
T Consensus 7 r~~il~aa~~l~~~---~G~~~~si~~Ia~~ag 36 (71)
T d1ui5a1 7 RATIIGAAADLFDR---RGYESTTLSEIVAHAG 36 (71)
T ss_dssp HHHHHHHHHHHHHH---HCTTTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH---hCccccCHHHHHHHHC
Confidence 67889999887775 4579999999999887
No 38
>d1xg0c_ a.1.1.3 (C:) Phycoerythrin beta subunit {Cryptophyte (Rhodomonas sp. CS24) [TaxId: 79257]}
Probab=20.46 E-value=1.2e+02 Score=22.23 Aligned_cols=47 Identities=21% Similarity=0.259 Sum_probs=28.4
Q ss_pred hHHHHhhchhHHHHHHHHHHhhhch---h---HHHHHHHHHHhhccccCCCcHHHHHHHH
Q psy16066 63 LNAIQTMCPHILRYLATAVIINRSK---R---NALKDLVKVIQQESYTYKDPITEFLEHL 116 (182)
Q Consensus 63 ln~IQt~cPhlLRYla~AvI~nr~r---r---~~lkdlv~vI~qe~y~Y~DPiTeFl~~L 116 (182)
..+-.--|-|.|||.+-|++..... . .-|+++.+.+ .=|+.-.+++|
T Consensus 77 ~~aC~RD~~~~LR~itYai~agd~~~l~~~gl~glre~y~~l-------gvP~~~~v~al 129 (175)
T d1xg0c_ 77 MAACLRDGEIILRYVSYALLSGDASVLEDRCLNGLKETYSSL-------GVPANSNARAV 129 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSHHHHHHTTTTHHHHHHHH-------TCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccchHHHHHHHHHHHHHh-------cCChHHHHHHH
Confidence 3445555789999999999887421 1 2344444443 25666666554
No 39
>d2id3a1 a.4.1.9 (A:13-80) Putative transcriptional regulator SCO5951 {Streptomyces coelicolor [TaxId: 1902]}
Probab=20.24 E-value=60 Score=19.27 Aligned_cols=31 Identities=3% Similarity=-0.060 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhcccccHHHHHhHhh
Q psy16066 145 CLDEFVENARLMIFETFCRIHQCISIQKESNVID 178 (182)
Q Consensus 145 ~~~~f~e~AR~lIfEtYCrIH~~I~I~~la~~L~ 178 (182)
.++.+++.|..++.| +=+..+++++||++.|
T Consensus 7 ~r~~Il~aa~~l~~~---~G~~~~t~~~Ia~~ag 37 (68)
T d2id3a1 7 IREAVLLAAGDALAA---DGFDALDLGEIARRAG 37 (68)
T ss_dssp HHHHHHHHHHHHHHH---HCGGGCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH---hCcccCCHHHHHHHHC
Confidence 367889999988888 4468899999999887
Done!