BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16067
(1386 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YJX|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YK2|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKB|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKC|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKE|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKI|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKJ|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YK9|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
Length = 209
Score = 236 bits (601), Expect = 8e-62, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 66 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 125
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 126 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 185
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 186 ERRIKEIVKKHSQFIGYPI 204
Score = 107 bits (267), Expect = 4e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 134 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 193
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 194 KKHSQFIGYPI 204
>pdb|2QF6|A Chain A, Hsp90 Complexed With A56322
pdb|2QF6|B Chain B, Hsp90 Complexed With A56322
pdb|2QF6|C Chain C, Hsp90 Complexed With A56322
pdb|2QF6|D Chain D, Hsp90 Complexed With A56322
pdb|2QG2|A Chain A, Hsp90 Complexed With A917985
pdb|3OW6|A Chain A, Crystal Structure Of Hsp90 With N-Aryl-Benzimidazolone I
pdb|3OWB|A Chain A, Crystal Structure Of Hsp90 With Ver-49009
pdb|3OWD|A Chain A, Crystal Structure Of Hsp90 With N-Aryl-Benzimidazolone Ii
Length = 207
Score = 236 bits (601), Expect = 8e-62, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 64 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 123
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 124 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 183
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 184 ERRIKEIVKKHSQFIGYPI 202
Score = 107 bits (267), Expect = 5e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 132 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 191
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 192 KKHSQFIGYPI 202
>pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In
The Presence Of An The Inhibitor Ganetespib
pdb|3TUH|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In
The Presence Of An The Inhibitor Ganetespib
Length = 209
Score = 236 bits (601), Expect = 9e-62, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 65 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 124
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 125 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 184
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 185 ERRIKEIVKKHSQFIGYPI 203
Score = 107 bits (267), Expect = 5e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 133 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 192
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 193 KKHSQFIGYPI 203
>pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383
pdb|2QFO|B Chain B, Hsp90 Complexed With A143571 And A516383
pdb|2QG0|A Chain A, Hsp90 Complexed With A943037
pdb|2QG0|B Chain B, Hsp90 Complexed With A943037
Length = 207
Score = 236 bits (601), Expect = 9e-62, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 64 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 123
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 124 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 183
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 184 ERRIKEIVKKHSQFIGYPI 202
Score = 107 bits (267), Expect = 5e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 132 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 191
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 192 KKHSQFIGYPI 202
>pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr
Length = 210
Score = 235 bits (600), Expect = 1e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 67 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 126
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 127 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 186
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 187 ERRIKEIVKKHSQFIGYPI 205
Score = 107 bits (267), Expect = 5e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 135 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 194
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 195 KKHSQFIGYPI 205
>pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-Chloro-2,
4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide
pdb|3K98|B Chain B, Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-Chloro-2,
4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide
pdb|3K99|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|B Chain B, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|C Chain C, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|D Chain D, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
Length = 232
Score = 235 bits (600), Expect = 1e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 73 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 132
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 133 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 192
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 193 ERRIKEIVKKHSQFIGYPI 211
Score = 107 bits (266), Expect = 5e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 141 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 200
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 201 KKHSQFIGYPI 211
>pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular
Chaperone
pdb|3EKO|B Chain B, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular
Chaperone
pdb|3EKR|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular
Chaperone
pdb|3EKR|B Chain B, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular
Chaperone
pdb|3HEK|A Chain A, Hsp90 N-Terminal Domain In Complex With 1-{4-[(2r)-1-(5-
Chloro-2,4-Dihydroxybenzoyl)pyrrolidin-2-Yl]benzyl}-3,3-
Difluoropyrrolidinium
pdb|3HEK|B Chain B, Hsp90 N-Terminal Domain In Complex With 1-{4-[(2r)-1-(5-
Chloro-2,4-Dihydroxybenzoyl)pyrrolidin-2-Yl]benzyl}-3,3-
Difluoropyrrolidinium
pdb|3R4N|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock
Protein 90. Identification Of Development Candidate
2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4N|B Chain B, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock
Protein 90. Identification Of Development Candidate
2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4O|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock
Protein 90. Identification Of Development Candidate
2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4O|B Chain B, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock
Protein 90. Identification Of Development Candidate
2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4P|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock
Protein 90. Identification Of Development Candidate
2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4P|B Chain B, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock
Protein 90. Identification Of Development Candidate
2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3RLP|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,
4-Dichloro-5-Methoxyphenyl)-6-Methylpyrimidin-2-Amine
pdb|3RLP|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,
4-Dichloro-5-Methoxyphenyl)-6-Methylpyrimidin-2-Amine
pdb|3RLQ|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2-Methyl-7h-Pyrrolo[2,3-
D]pyrimidine-5- Carbonitrile
pdb|3RLQ|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2-Methyl-7h-Pyrrolo[2,3-
D]pyrimidine-5- Carbonitrile
pdb|3RLR|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2,
6-Dimethyl-7h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
pdb|3RLR|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2,
6-Dimethyl-7h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
Length = 226
Score = 235 bits (600), Expect = 1e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 73 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 132
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 133 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 192
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 193 ERRIKEIVKKHSQFIGYPI 211
Score = 107 bits (266), Expect = 5e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 141 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 200
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 201 KKHSQFIGYPI 211
>pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 236
Score = 235 bits (599), Expect = 1e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 92 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 151
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 152 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 211
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 212 ERRIKEIVKKHSQFIGYPI 230
Score = 107 bits (266), Expect = 6e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 160 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 219
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 220 KKHSQFIGYPI 230
>pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule Fragment
Length = 218
Score = 235 bits (599), Expect = 1e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 75 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 134
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 135 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 194
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 195 ERRIKEIVKKHSQFIGYPI 213
Score = 107 bits (266), Expect = 6e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 143 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 202
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 203 KKHSQFIGYPI 213
>pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE8|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEI|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEJ|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 235 bits (599), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 96 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 155
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 156 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 215
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 216 ERRIKEIVKKHSQFIGYPI 234
Score = 107 bits (266), Expect = 6e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 164 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 223
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 224 KKHSQFIGYPI 234
>pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n-
Dimethylaminoethylamino-geldanamycin
Length = 215
Score = 234 bits (598), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 72 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 131
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 132 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 191
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 192 ERRIKEIVKKHSQFIGYPI 210
Score = 107 bits (266), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 140 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 199
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 200 KKHSQFIGYPI 210
>pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE3|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE4|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE5|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE6|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE9|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEA|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEB|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEC|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YED|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEF|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEG|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEG|B Chain B, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEH|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 234 bits (598), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 96 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 155
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 156 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 215
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 216 ERRIKEIVKKHSQFIGYPI 234
Score = 107 bits (266), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 164 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 223
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 224 KKHSQFIGYPI 234
>pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A
pdb|3INX|A Chain A, Hsp90 N-Terminal Domain With Pochoxime B
Length = 228
Score = 234 bits (598), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 72 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 131
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 132 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 191
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 192 ERRIKEIVKKHSQFIGYPI 210
Score = 106 bits (265), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 140 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 199
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 200 KKHSQFIGYPI 210
>pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHX|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 234 bits (597), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 93 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 152
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 153 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 212
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 213 ERRIKEIVKKHSQFIGYPI 231
Score = 106 bits (265), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 161 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 220
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 221 KKHSQFIGYPI 231
>pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With
(4-Hydroxyphenyl)morpholin- 4-Yl Methanone
pdb|4EGI|A Chain A, Hsp90-Alpha Atpase Domain In Complex With
2-Amino-4-Ethylthio-6- Methyl-1,3,5-Triazine
pdb|4EGK|A Chain A, Human Hsp90-Alpha Atpase Domain Bound To Radicicol
Length = 232
Score = 234 bits (597), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 76 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 135
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 136 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 195
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 196 ERRIKEIVKKHSQFIGYPI 214
Score = 106 bits (265), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 144 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 203
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 204 KKHSQFIGYPI 214
>pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An
Aminotriazine Fragment Molecule
pdb|3B24|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An
Aminotriazine Fragment Molecule
pdb|3B25|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ch4675194
pdb|3B26|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ro1127850
pdb|3B26|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ro1127850
pdb|3B27|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ro4919127
pdb|3B28|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ch5015765
pdb|3B28|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ch5015765
pdb|3VHA|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A Macrocyclic
Inhibitor
pdb|3VHC|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A Macrocyclic
Inhibitor
pdb|3VHD|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A Macrocyclic
Inhibitor, Ch5164840
pdb|3VHD|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With A Macrocyclic
Inhibitor, Ch5164840
Length = 229
Score = 234 bits (597), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 73 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 132
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 133 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 192
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 193 ERRIKEIVKKHSQFIGYPI 211
Score = 106 bits (265), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 141 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 200
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 201 KKHSQFIGYPI 211
>pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of
Chaperone Hsp90
pdb|3BMY|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of
Chaperone Hsp90
pdb|3QTF|A Chain A, Design And Sar Of Macrocyclic Hsp90 Inhibitors With
Increased Metabolic Stability And Potent
Cell-Proliferation Activity
pdb|3R91|A Chain A, Macrocyclic Lactams As Potent Hsp90 Inhibitors With
Excellent Tumor Exposure And Extended Biomarker Activity.
pdb|3R92|A Chain A, Discovery Of A Macrocyclic O-Aminobenzamide Hsp90 Inhibitor
With Heterocyclic Tether That Shows Extended Biomarker
Activity And In Vivo Efficacy In A Mouse Xenograft Model.
pdb|3RKZ|A Chain A, Discovery Of A Stable Macrocyclic O-Aminobenzamide Hsp90
Inhibitor Capable Of Significantly Decreasing Tumor
Volume In A Mouse Xenograft Model
Length = 226
Score = 234 bits (597), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 70 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 129
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 130 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 189
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 190 ERRIKEIVKKHSQFIGYPI 208
Score = 106 bits (265), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 138 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 197
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 198 KKHSQFIGYPI 208
>pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg
pdb|1YER|A Chain A, Human Hsp90 Geldanamycin-Binding Domain, "closed"
Conformation
pdb|1YES|A Chain A, Human Hsp90 Geldanamycin-Binding Domain, "open" Conformation
pdb|1YET|A Chain A, Geldanamycin Bound To The Hsp90 Geldanamycin-Binding Domain
Length = 228
Score = 234 bits (597), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 72 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 131
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 132 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 191
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 192 ERRIKEIVKKHSQFIGYPI 210
Score = 106 bits (265), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 140 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 199
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 200 KKHSQFIGYPI 210
>pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol
pdb|4EFT|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
3- Cyclohexyl-2-(6-Hydroxy-1h-Indazol-3-Yl)-Propionitrile
pdb|4EFU|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
6-Hydroxy- 3-(3-Methyl-Benzyl)-1h-Indazole-5-Carboxylic
Acid Benzyl-Methyl-Amide
Length = 229
Score = 234 bits (597), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 73 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 132
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 133 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 192
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 193 ERRIKEIVKKHSQFIGYPI 211
Score = 106 bits (265), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 141 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 200
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 201 KKHSQFIGYPI 211
>pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment
pdb|3FT8|A Chain A, Structure Of Hsp90 Bound With A Noval Fragment.
pdb|3HYY|A Chain A, Crystal Structure Of Hsp90 With Fragment 37-D04
pdb|3HYZ|A Chain A, Crystal Structure Of Hsp90 With Fragment 42-C03
pdb|3HYZ|B Chain B, Crystal Structure Of Hsp90 With Fragment 42-C03
pdb|3HZ1|A Chain A, Crystal Structure Of Hsp90 With Fragments 37-D04 And 42-C03
pdb|3HZ5|A Chain A, Crystal Structure Of Hsp90 With Fragment Z064
pdb|2XAB|A Chain A, Structure Of Hsp90 With An Inhibitor Bound
pdb|2XAB|B Chain B, Structure Of Hsp90 With An Inhibitor Bound
pdb|2XJX|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDK|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDL|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDS|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDX|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHR|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHT|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XK2|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 234 bits (597), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 93 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 152
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 153 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 212
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 213 ERRIKEIVKKHSQFIGYPI 231
Score = 106 bits (265), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 161 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 220
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 221 KKHSQFIGYPI 231
>pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock
Protein 90. Identification Of Development Candidate
2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3T0H|A Chain A, Structure Insights Into Mechanisms Of Atp Hydrolysis And The
Activation Of Human Hsp90
pdb|3T0Z|A Chain A, Hsp90 N-Terminal Domain Bound To Atp
pdb|3T10|A Chain A, Hsp90 N-Terminal Domain Bound To Acp
pdb|3T1K|A Chain A, Hsp90 N-Terminal Domain Bound To Anp
pdb|3T1K|B Chain B, Hsp90 N-Terminal Domain Bound To Anp
pdb|3T2S|A Chain A, Hsp90 N-Terminal Domain Bound To Ags
pdb|3T2S|B Chain B, Hsp90 N-Terminal Domain Bound To Ags
Length = 228
Score = 234 bits (597), Expect = 3e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 72 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 131
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 132 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 191
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 192 ERRIKEIVKKHSQFIGYPI 210
Score = 106 bits (265), Expect = 8e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 140 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 199
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 200 KKHSQFIGYPI 210
>pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
pdb|1YC3|A Chain A, Crystal Structure Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
pdb|1YC4|A Chain A, Crystal Structure Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
Length = 264
Score = 234 bits (596), Expect = 3e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 108 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 167
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 168 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 227
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 228 ERRIKEIVKKHSQFIGYPI 246
Score = 106 bits (265), Expect = 8e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 176 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 235
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 236 KKHSQFIGYPI 246
>pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWO|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWP|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWP|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWQ|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWQ|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
Length = 230
Score = 234 bits (596), Expect = 3e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 74 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 133
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 134 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 193
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 194 ERRIKEIVKKHSQFIGYPI 212
Score = 106 bits (265), Expect = 8e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 142 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 201
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 202 KKHSQFIGYPI 212
>pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3-
(2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo- 1,5-Dihydro-
[1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid Ethyl Ester
{zk 2819}
pdb|3HHU|B Chain B, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3-
(2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo- 1,5-Dihydro-
[1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid Ethyl Ester
{zk 2819}
Length = 224
Score = 234 bits (596), Expect = 3e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 80 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 139
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 140 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 199
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 200 ERRIKEIVKKHSQFIGYPI 218
Score = 106 bits (265), Expect = 8e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 148 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 207
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 208 KKHSQFIGYPI 218
>pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-Chloro-6-{[(2r)-2-
(2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1,3-Diol
Length = 251
Score = 233 bits (595), Expect = 4e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 95 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 154
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 155 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 214
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 215 ERRIKEIVKKHSQFIGYPI 233
Score = 106 bits (265), Expect = 9e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 163 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 222
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 223 KKHSQFIGYPI 233
>pdb|2YI0|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI5|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI6|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-
4-Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI7|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors
Length = 229
Score = 233 bits (595), Expect = 4e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 80 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 139
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 140 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 199
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 200 ERRIKEIVKKHSQFIGYPI 218
Score = 106 bits (264), Expect = 9e-23, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 148 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 207
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 208 KKHSQFIGYPI 218
>pdb|1UYI|A Chain A, Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9-
Pent-9h-Purin-6-Ylamine
Length = 236
Score = 233 bits (595), Expect = 4e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 80 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 139
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 140 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 199
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 200 ERRIKEIVKKHSQFIGYPI 218
Score = 106 bits (264), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 148 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 207
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 208 KKHSQFIGYPI 218
>pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021
Length = 237
Score = 233 bits (595), Expect = 4e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 81 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 140
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 141 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 200
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 201 ERRIKEIVKKHSQFIGYPI 219
Score = 106 bits (264), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 149 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 208
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 209 KKHSQFIGYPI 219
>pdb|3D0B|A Chain A, Crystal Structure Of Benzamide Tetrahydro-4h-Carbazol-4-One
Bound To Hsp90
pdb|3MNR|P Chain P, Crystal Structure Of Benzamide Snx-1321 Bound To Hsp90
Length = 232
Score = 233 bits (595), Expect = 4e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 80 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 139
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 140 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 199
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 200 ERRIKEIVKKHSQFIGYPI 218
Score = 106 bits (264), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 148 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 207
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 208 KKHSQFIGYPI 218
>pdb|2CCS|A Chain A, Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3-
Yl)-Benzene-1,2-Diol
pdb|2CCT|A Chain A, Human Hsp90 With 5-(5-Chloro-2,4-Dihydroxy-Phenyl)-4-
Piperazin-1-Yl-2h-Pyrazole-3-Carboxylic Acid Ethylamide
pdb|2CCU|A Chain A, Human Hsp90 With 4-Chloro-6-(4-(4-(4-Methanesulphonyl-
Benzyl)-Pierazin-1-Yl)-1h-Pyrazol-3-Yl)-Benzene-1,3-Diol
Length = 236
Score = 233 bits (595), Expect = 4e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 80 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 139
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 140 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 199
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 200 ERRIKEIVKKHSQFIGYPI 218
Score = 106 bits (264), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 148 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 207
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 208 KKHSQFIGYPI 218
>pdb|1UY6|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UY7|A Chain A, Human Hsp90-alpha With
9-butyl-8-(4-methoxy-benzyl)-9h-purin-6-ylamine
pdb|1UY8|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(3-Trimethoxy-Benzyl)-9h-Purin-6ylamine
pdb|1UY9|A Chain A, Human Hsp90-Alpha With
8-Benzo[1,3]dioxol-,5-Ylmethyl-9-Butyl-9h-Purin-6-Ylamine
pdb|1UYC|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(2,5-Dimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UYD|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-
(2-Chloro-3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UYE|A Chain A, Human Hsp90-Alpha With 8-(2-Chloro-3,4,5-Trimethoxy-Benzyl)
-9-Pent-4-Ylnyl-9h-Purin-6-Ylamine
pdb|1UYF|A Chain A, Human Hsp90-Alpha With 8-(2-Chloro-3,4,5-Trimethoxy-Benzyl)
-2-Fluoro-9-Pent-4-Ylnyl-9h-Purin-6-Ylamine
pdb|1UYG|A Chain A, Human Hsp90-Alpha With
8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYH|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-
(2,5-Dimethoxy-Benzyl)-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYK|A Chain A, Human Hsp90-Alpha With 8-Benzo[1,3]dioxol-,5-Ylmethyl-9-But
Yl-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYL|A Chain A, Structure-Activity Relationships In Purine-Based Inhibitor
Binding To Hsp90 Isoforms
pdb|2UWD|A Chain A, Inhibition Of The Hsp90 Molecular Chaperone In Vitro And In
Vivo By Novel, Synthetic, Potent Resorcinylic Pyrazole,
Isoxazole Amide Analogs
pdb|2VCI|A Chain A, 4,5 Diaryl Isoxazole Hsp90 Chaperone Inhibitors: Potential
Therapeutic Agents For The Treatment Of Cancer
pdb|2VCJ|A Chain A, 4,5 Diaryl Isoxazole Hsp90 Chaperone Inhibitors: Potential
Therapeutic Agents For The Treatment Of Cancer
pdb|2WI1|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI2|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI2|B Chain B, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI3|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI4|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI5|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI6|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI7|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|4FCP|A Chain A, Targetting Conserved Water Molecules: Design Of
4-Aryl-5-Cyanopyrrolo [2,3-D] Pyrimidine Hsp90 Inhibitors
Using Fragment-Based Screening And Structure-Based
Optimization
pdb|4FCP|B Chain B, Targetting Conserved Water Molecules: Design Of
4-Aryl-5-Cyanopyrrolo [2,3-D] Pyrimidine Hsp90 Inhibitors
Using Fragment-Based Screening And Structure-Based
Optimization
pdb|4FCQ|A Chain A, Targeting Conserved Water Molecules: Design Of 4-Aryl-5-
Cyanopyrrolo[2,3-D]pyrimidine Hsp90 Inhibitors Using
Fragment-Based Screening And Structure-Based Optimization
pdb|4FCR|A Chain A, Targeting Conserved Water Molecules: Design Of 4-Aryl-5-
Cyanopyrrolo[2,3-D]pyrimidine Hsp90 Inhibitors Using
Fragment-Based Screening And Structure-Based Optimization
Length = 236
Score = 233 bits (594), Expect = 5e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 80 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 139
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 140 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 199
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 200 ERRIKEIVKKHSQFIGYPI 218
Score = 106 bits (264), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 148 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 207
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 208 KKHSQFIGYPI 218
>pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water
Soluble Inhibitor Pu-H64
pdb|2FWZ|A Chain A, Structure Of Human Hsp90-alpha Bound To The Potent Water
Soluble Inhibitor Pu-h71
pdb|2H55|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water
Soluble Inhibitor Pu-Dz8
pdb|3O0I|A Chain A, Structure Of The Human Hsp90-Alpha N-Domain Bound To The
Hsp90 Inhibitor Pu-H54
Length = 256
Score = 233 bits (594), Expect = 5e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 100 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 159
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 160 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 219
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 220 ERRIKEIVKKHSQFIGYPI 238
Score = 106 bits (264), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 168 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 227
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 228 KKHSQFIGYPI 238
>pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based Design
pdb|2BT0|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based Design
pdb|2BT0|B Chain B, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based Design
pdb|2BYH|A Chain A, 3-(5-Chloro-2,4-Dihydroxyphenyl)-Pyrazole-4-Carboxamides As
Inhibitors Of The Hsp90 Molecular Chaperone
pdb|2BYI|A Chain A, 3-(5-Chloro-2,4-Dihydroxyphenyl)-Pyrazole-4-Carboxamides As
Inhibitors Of The Hsp90 Molecular Chaperone
pdb|2BZ5|A Chain A, Structure-Based Discovery Of A New Class Of Hsp90 Inhibitors
pdb|2BZ5|B Chain B, Structure-Based Discovery Of A New Class Of Hsp90 Inhibitors
Length = 235
Score = 233 bits (594), Expect = 6e-61, Method: Composition-based stats.
Identities = 106/139 (76%), Positives = 121/139 (87%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 79 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 138
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 139 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 198
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 199 ERRIKEIVKKHSQFIGYPI 217
Score = 106 bits (264), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 147 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 206
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 207 KKHSQFIGYPI 217
>pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 231 bits (590), Expect = 2e-60, Method: Composition-based stats.
Identities = 105/139 (75%), Positives = 120/139 (86%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 96 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 155
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 156 SAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 215
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQF GYPI
Sbjct: 216 ERRIKEIVKKHSQFQGYPI 234
Score = 103 bits (258), Expect = 5e-22, Method: Composition-based stats.
Identities = 44/71 (61%), Positives = 52/71 (73%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDDEQY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 164 VTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 223
Query: 494 XXHSQFIGYPI 504
HSQF GYPI
Sbjct: 224 KKHSQFQGYPI 234
>pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XJJ|B Chain B, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 231 bits (590), Expect = 2e-60, Method: Composition-based stats.
Identities = 105/139 (75%), Positives = 120/139 (86%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IPNK+++TLTI+D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 93 LIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 152
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KVTV +KHNDD QY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 153 SAYLVAEKVTVITKHNDDVQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLE 212
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 213 ERRIKEIVKKHSQFIGYPI 231
Score = 103 bits (257), Expect = 6e-22, Method: Composition-based stats.
Identities = 44/71 (61%), Positives = 52/71 (73%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV +KHNDD QY WESSAGGSFT++ D EP+GRGTK++LH+KEDQ EY
Sbjct: 161 VTVITKHNDDVQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIV 220
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 221 KKHSQFIGYPI 231
>pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3
(9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine)
Length = 220
Score = 230 bits (586), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 120/139 (86%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
IIPN +E+TLT++D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 74 IIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 133
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KV V +KHNDDEQY WESSAGGSFT++ D+ EP+GRGTK++LH+KEDQ EY
Sbjct: 134 SAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRADHGEPIGRGTKVILHLKEDQTEYLE 193
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 194 ERRVKEVVKKHSQFIGYPI 212
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+ V +KHNDDEQY WESSAGGSFT++ D+ EP+GRGTK++LH+KEDQ EY
Sbjct: 142 VVVITKHNDDEQYAWESSAGGSFTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVV 201
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 202 KKHSQFIGYPI 212
>pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A
Pyrrolo-Pyrimidine Methoxypyridine Inhibitor
Length = 239
Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 120/139 (86%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
IIPN +E+TLT++D+GIGMTKADL+NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 79 IIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 138
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVA+KV V +KHNDDEQY WESSAGGSFT++ D+ EP+GRGTK++LH+KEDQ EY
Sbjct: 139 SAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRADHGEPIGRGTKVILHLKEDQTEYLE 198
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 199 ERRVKEVVKKHSQFIGYPI 217
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 53/71 (74%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+ V +KHNDDEQY WESSAGGSFT++ D+ EP+GRGTK++LH+KEDQ EY
Sbjct: 147 VVVITKHNDDEQYAWESSAGGSFTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVV 206
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 207 KKHSQFIGYPI 217
>pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90
pdb|4GQT|B Chain B, N-Terminal Domain Of C. Elegans Hsp90
Length = 227
Score = 220 bits (560), Expect = 5e-57, Method: Composition-based stats.
Identities = 104/139 (74%), Positives = 116/139 (83%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I PNKEEKTLTI+D+GIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY
Sbjct: 71 ITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 130
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SA+LVADKV VTSK+NDD+ Y WESSAGGSF ++P N + RGTKIV+H+KEDQ ++
Sbjct: 131 SAFLVADKVVVTSKNNDDDSYQWESSAGGSFVVRPFNDPEVTRGTKIVMHIKEDQIDFLE 190
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HSQFIGYPI
Sbjct: 191 ERKIKEIVKKHSQFIGYPI 209
Score = 88.6 bits (218), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 49/71 (69%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+ VTSK+NDD+ Y WESSAGGSF ++P N + RGTKIV+H+KEDQ ++
Sbjct: 139 VVVTSKNNDDDSYQWESSAGGSFVVRPFNDPEVTRGTKIVMHIKEDQIDFLEERKIKEIV 198
Query: 494 XXHSQFIGYPI 504
HSQFIGYPI
Sbjct: 199 KKHSQFIGYPI 209
>pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2 Domain
pdb|2XCM|B Chain B, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2 Domain
Length = 214
Score = 209 bits (532), Expect = 8e-54, Method: Composition-based stats.
Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
IIP+K TLTI+DSGIGMTK+DLVNNLGTIA+SGTK FMEAL AGAD+SMIGQFGVGFY
Sbjct: 71 IIPDKATSTLTIVDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFY 130
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNS-EPLGRGTKIVLHMKEDQAEYX 1345
SAYLVA++V VT+KHNDDEQY+WES AGGSFT+ D S E LGRGTK+VL++K+DQ EY
Sbjct: 131 SAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKMVLYLKDDQMEYL 190
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+FI YPI
Sbjct: 191 EERRIKDLVKKHSEFISYPI 210
Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNS-EPLGRGTKIVLHMKEDQAEYXXXXXXXXX 492
+ VT+KHNDDEQY+WES AGGSFT+ D S E LGRGTK+VL++K+DQ EY
Sbjct: 139 VVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKMVLYLKDDQMEYLEERRIKDL 198
Query: 493 XXXHSQFIGYPI 504
HS+FI YPI
Sbjct: 199 VKKHSEFISYPI 210
>pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
pdb|2JKI|B Chain B, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
pdb|2JKI|C Chain C, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
Length = 223
Score = 208 bits (530), Expect = 2e-53, Method: Composition-based stats.
Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
IIP+K TLTI+DSGIGMTK+DLVNNLGTIA+SGTK FMEAL AGAD+SMIGQFGVGFY
Sbjct: 74 IIPDKATSTLTIVDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFY 133
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNS-EPLGRGTKIVLHMKEDQAEYX 1345
SAYLVA++V VT+KHNDDEQY+WES AGGSFT+ D S E LGRGTK+VL++K+DQ EY
Sbjct: 134 SAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKMVLYLKDDQMEYL 193
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+FI YPI
Sbjct: 194 EERRIKDLVKRHSEFISYPI 213
Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNS-EPLGRGTKIVLHMKEDQAEYXXXXXXXXX 492
+ VT+KHNDDEQY+WES AGGSFT+ D S E LGRGTK+VL++K+DQ EY
Sbjct: 142 VVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKMVLYLKDDQMEYLEERRIKDL 201
Query: 493 XXXHSQFIGYPI 504
HS+FI YPI
Sbjct: 202 VKRHSEFISYPI 213
>pdb|3K60|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf07_0029) Bound To Adp
pdb|3K60|B Chain B, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf07_0029) Bound To Adp
Length = 223
Score = 205 bits (522), Expect = 1e-52, Method: Composition-based stats.
Identities = 98/140 (70%), Positives = 111/140 (79%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
IIP+K TLTI DSGIGMTK DL+NNLGTIA+SGTKAFMEA+QA DISMIGQFGVGFY
Sbjct: 66 IIPDKTNNTLTIEDSGIGMTKNDLINNLGTIARSGTKAFMEAIQASGDISMIGQFGVGFY 125
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNS-EPLGRGTKIVLHMKEDQAEYX 1345
SAYLVAD V V SK+NDDEQY+WES+AGGSFT+ D + E LGRGTKI+LH+KEDQ EY
Sbjct: 126 SAYLVADHVVVISKNNDDEQYVWESAAGGSFTVTKDETNEKLGRGTKIILHLKEDQLEYL 185
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+FI +PI
Sbjct: 186 EEKRIKDLVKKHSEFISFPI 205
Score = 90.9 bits (224), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNS-EPLGRGTKIVLHMKEDQAEYXXXXXXXXX 492
+ V SK+NDDEQY+WES+AGGSFT+ D + E LGRGTKI+LH+KEDQ EY
Sbjct: 134 VVVISKNNDDEQYVWESAAGGSFTVTKDETNEKLGRGTKIILHLKEDQLEYLEEKRIKDL 193
Query: 493 XXXHSQFIGYPI 504
HS+FI +PI
Sbjct: 194 VKKHSEFISFPI 205
>pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From
Leishmania Major, Lmjf33.0312:m1-K213
pdb|3Q5J|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From
Leishmania Major, Lmjf33.0312:m1-K213 In The Presence Of
17-Dmap- Geldanamycin
pdb|3Q5K|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From
Leishmania Major, Lmjf33.0312:m1-K213 In The Presence Of
An Inhibitor
pdb|3Q5L|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From
Leishmania Major, Lmjf33.0312:m1-K 213 In The Presence Of
17-Aep- Geldanamycin
pdb|3Q5L|B Chain B, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From
Leishmania Major, Lmjf33.0312:m1-K 213 In The Presence Of
17-Aep- Geldanamycin
pdb|3Q5L|C Chain C, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From
Leishmania Major, Lmjf33.0312:m1-K 213 In The Presence Of
17-Aep- Geldanamycin
pdb|3Q5L|D Chain D, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From
Leishmania Major, Lmjf33.0312:m1-K 213 In The Presence Of
17-Aep- Geldanamycin
pdb|3U67|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp90 From
Leishmania Major(Lmjf33.0312)in Complex With Adp
Length = 231
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/149 (65%), Positives = 114/149 (76%), Gaps = 5/149 (3%)
Query: 1222 FGQDP-----IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS 1276
G+ P ++P+KE KTLT+ D+GIGMTKADLVNNLGTIA+SGTKAFMEAL+AG D+S
Sbjct: 73 LGESPRLCIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGGDMS 132
Query: 1277 MIGQFGVGFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLH 1336
MIGQFGVGFYSAYLVAD+VTVTSK+N DE Y+WESSAGG+FTI + RGT+I LH
Sbjct: 133 MIGQFGVGFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTITSTPESDMKRGTRITLH 192
Query: 1337 MKEDQAEYXXXXXXXXXXXXHSQFIGYPI 1365
+KEDQ EY HS+FIGY I
Sbjct: 193 LKEDQMEYLEPRRLKELIKKHSEFIGYDI 221
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 46/71 (64%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TVTSK+N DE Y+WESSAGG+FTI + RGT+I LH+KEDQ EY
Sbjct: 151 VTVTSKNNSDESYVWESSAGGTFTITSTPESDMKRGTRITLHLKEDQMEYLEPRRLKELI 210
Query: 494 XXHSQFIGYPI 504
HS+FIGY I
Sbjct: 211 KKHSEFIGYDI 221
>pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From
Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A
Benzamide Derivative
pdb|3OPD|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From
Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A
Benzamide Derivative
pdb|3OPD|C Chain C, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From
Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A
Benzamide Derivative
pdb|3OMU|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From
Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A
Thienopyrimidine Derivative
pdb|3OMU|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From
Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A
Thienopyrimidine Derivative
Length = 231
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 110/139 (79%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IP++ KTLT+ DSGIGMTKADLVNNLGTIA+SGTK+FMEAL+AG D+SMIGQFGVGFY
Sbjct: 83 VIPDRVNKTLTVEDSGIGMTKADLVNNLGTIARSGTKSFMEALEAGGDMSMIGQFGVGFY 142
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVAD+VTV SK+N+D+ Y WESSAGG+FT+ L RGT+IVLH+KEDQ EY
Sbjct: 143 SAYLVADRVTVVSKNNEDDAYTWESSAGGTFTVTSTPDCDLKRGTRIVLHLKEDQQEYLE 202
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HS+FIGY I
Sbjct: 203 ERRLKDLIKKHSEFIGYDI 221
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 46/71 (64%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV SK+N+D+ Y WESSAGG+FT+ L RGT+IVLH+KEDQ EY
Sbjct: 151 VTVVSKNNEDDAYTWESSAGGTFTVTSTPDCDLKRGTRIVLHLKEDQQEYLEERRLKDLI 210
Query: 494 XXHSQFIGYPI 504
HS+FIGY I
Sbjct: 211 KKHSEFIGYDI 221
>pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From
Trypanosoma Brucei, Tb10.26.1080 In The Presence Of An
The Inhibitor Biib021
pdb|3O6O|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From
Trypanosoma Brucei, Tb10.26.1080 In The Presence Of An
The Inhibitor Biib021
Length = 214
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 110/139 (79%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
+IP++ KTLT+ DSGIGMTKADLVNNLGTIA+SGTK+FMEAL+AG D+SMIGQFGVGFY
Sbjct: 66 VIPDRVNKTLTVEDSGIGMTKADLVNNLGTIARSGTKSFMEALEAGGDMSMIGQFGVGFY 125
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXX 1346
SAYLVAD+VTV SK+N+D+ Y WESSAGG+FT+ L RGT+IVLH+KEDQ EY
Sbjct: 126 SAYLVADRVTVVSKNNEDDAYTWESSAGGTFTVTSTPDCDLKRGTRIVLHLKEDQQEYLE 185
Query: 1347 XXXXXXXXXXHSQFIGYPI 1365
HS+FIGY I
Sbjct: 186 ERRLKDLIKKHSEFIGYDI 204
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 46/71 (64%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+TV SK+N+D+ Y WESSAGG+FT+ L RGT+IVLH+KEDQ EY
Sbjct: 134 VTVVSKNNEDDAYTWESSAGGTFTVTSTPDCDLKRGTRIVLHLKEDQQEYLEERRLKDLI 193
Query: 494 XXHSQFIGYPI 504
HS+FIGY I
Sbjct: 194 KKHSEFIGYDI 204
>pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The N-
Terminal Domain Of The Yeast Hsp90 Chaperone
Length = 225
Score = 189 bits (480), Expect = 9e-48, Method: Composition-based stats.
Identities = 92/140 (65%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+L+NNLGTIAKSGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 77 ITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFY 136
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 137 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 196
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 197 EEKRIKEVIKKHSEFVAYPI 216
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXX 492
+ V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 145 VQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEV 204
Query: 493 XXXHSQFIGYPI 504
HS+F+ YPI
Sbjct: 205 IKKHSEFVAYPI 216
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex
pdb|2CG9|B Chain B, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex
Length = 677
Score = 189 bits (480), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+L+NNLGTIAKSGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 66 ITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFY 125
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 126 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 185
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 186 EEKRIKEVIKRHSEFVAYPI 205
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 436 VTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXXXX 494
V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 136 VISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIK 195
Query: 495 XHSQFIGYPI 504
HS+F+ YPI
Sbjct: 196 RHSEFVAYPI 205
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 21 LVNLLFETSLLSSGFTLEDP 40
L LL+ET+LL+SGF+L++P
Sbjct: 642 LTKLLYETALLTSGFSLDEP 661
>pdb|1US7|A Chain A, Complex Of Hsp90 And P50
pdb|2BRC|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of
Yeast Hsp90.
pdb|2IWS|A Chain A, Radicicol Analogues Bound To The Atp Site Of Hsp90
pdb|2IWU|A Chain A, Analogues Of Radicicol Bound To The Atp-Binding Site Of
Hsp90
pdb|2IWX|A Chain A, Analogues Of Radicicol Bound To The Atp-Binding Site Of
Hsp90.
pdb|1AMW|A Chain A, Adp Binding Site In The Hsp90 Molecular Chaperone
pdb|2VW5|A Chain A, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2VW5|B Chain B, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2VW5|C Chain C, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2VW5|D Chain D, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2XD6|A Chain A, Hsp90 Complexed With A Resorcylic Acid Macrolactone.
pdb|2XX4|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX5|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
Length = 214
Score = 189 bits (479), Expect = 1e-47, Method: Composition-based stats.
Identities = 92/140 (65%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+L+NNLGTIAKSGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 66 ITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFY 125
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 126 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 185
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 186 EEKRIKEVIKRHSEFVAYPI 205
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXX 492
+ V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 134 VQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEV 193
Query: 493 XXXHSQFIGYPI 504
HS+F+ YPI
Sbjct: 194 IKRHSEFVAYPI 205
>pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of
Yeast Hsp90.
pdb|2BRE|B Chain B, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of
Yeast Hsp90.
pdb|2VWC|A Chain A, Structure Of The Hsp90 Inhibitor Macbecin Bound To The N-
Terminus Of Yeast Hsp90
Length = 219
Score = 189 bits (479), Expect = 1e-47, Method: Composition-based stats.
Identities = 92/140 (65%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+L+NNLGTIAKSGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 66 ITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFY 125
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 126 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 185
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 186 EEKRIKEVIKRHSEFVAYPI 205
Score = 77.4 bits (189), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXX 492
+ V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 134 VQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEV 193
Query: 493 XXXHSQFIGYPI 504
HS+F+ YPI
Sbjct: 194 IKRHSEFVAYPI 205
>pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal
Domain Of The Yeast Hsp90 Chaperone
Length = 225
Score = 188 bits (478), Expect = 1e-47, Method: Composition-based stats.
Identities = 92/140 (65%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+L+NNLGTIAKSGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 77 ITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFY 136
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 137 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 196
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 197 EEKRIKEVIKRHSEFVAYPI 216
Score = 77.4 bits (189), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXX 492
+ V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 145 VQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEV 204
Query: 493 XXXHSQFIGYPI 504
HS+F+ YPI
Sbjct: 205 IKRHSEFVAYPI 216
>pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|B Chain B, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|C Chain C, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|D Chain D, Macrolactone Inhibitor Bound To Hsp90 N-Term
Length = 214
Score = 188 bits (478), Expect = 2e-47, Method: Composition-based stats.
Identities = 92/140 (65%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+L+NNLGTIAKSGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 66 ITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFY 125
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 126 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 185
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 186 EEKRIKEVIKRHSEFVAYPI 205
Score = 77.0 bits (188), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXX 492
+ V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 134 VQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEV 193
Query: 493 XXXHSQFIGYPI 504
HS+F+ YPI
Sbjct: 194 IKRHSEFVAYPI 205
>pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone
Length = 213
Score = 188 bits (478), Expect = 2e-47, Method: Composition-based stats.
Identities = 92/140 (65%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+L+NNLGTIAKSGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 65 ITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFY 124
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 125 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 184
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 185 EEKRIKEVIKRHSEFVAYPI 204
Score = 77.0 bits (188), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXX 492
+ V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 133 VQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEV 192
Query: 493 XXXHSQFIGYPI 504
HS+F+ YPI
Sbjct: 193 IKRHSEFVAYPI 204
>pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal Domain
Of The Yeast Hsp90 Chaperone
pdb|1AH8|B Chain B, Structure Of The Orthorhombic Form Of The N-Terminal Domain
Of The Yeast Hsp90 Chaperone
pdb|1AH6|A Chain A, Structure Of The Tetragonal Form Of The N-Terminal Domain Of
The Yeast Hsp90 Chaperone
Length = 220
Score = 188 bits (478), Expect = 2e-47, Method: Composition-based stats.
Identities = 92/140 (65%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+L+NNLGTIAKSGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 66 ITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFY 125
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 126 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 185
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 186 EEKRIKEVIKRHSEFVAYPI 205
Score = 77.0 bits (188), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXX 492
+ V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 134 VQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEV 193
Query: 493 XXXHSQFIGYPI 504
HS+F+ YPI
Sbjct: 194 IKRHSEFVAYPI 205
>pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp
pdb|2WEQ|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Geldanamycin
pdb|2WER|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Radicicol
pdb|2WER|B Chain B, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Radicicol
Length = 220
Score = 188 bits (478), Expect = 2e-47, Method: Composition-based stats.
Identities = 92/140 (65%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+L+NNLGTIAKSGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 66 ITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFY 125
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 126 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 185
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 186 EEKRIKEVIKRHSEFVAYPI 205
Score = 77.0 bits (188), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXX 492
+ V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 134 VQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEV 193
Query: 493 XXXHSQFIGYPI 504
HS+F+ YPI
Sbjct: 194 IKRHSEFVAYPI 205
>pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90
Chaperone In Complex With Geldanamycin
Length = 230
Score = 188 bits (478), Expect = 2e-47, Method: Composition-based stats.
Identities = 92/140 (65%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+L+NNLGTIAKSGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 76 ITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFY 135
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 136 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 195
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 196 EEKRIKEVIKRHSEFVAYPI 215
Score = 77.0 bits (188), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXX 492
+ V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 144 VQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEV 203
Query: 493 XXXHSQFIGYPI 504
HS+F+ YPI
Sbjct: 204 IKRHSEFVAYPI 215
>pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant
pdb|2AKP|B Chain B, Hsp90 Delta24-n210 Mutant
Length = 186
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+L+NNLGTIAKSGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 42 ITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFY 101
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 102 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 161
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 162 EEKRIKEVIKRHSEFVAYPI 181
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 436 VTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXXXX 494
V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 112 VISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIK 171
Query: 495 XHSQFIGYPI 504
HS+F+ YPI
Sbjct: 172 RHSEFVAYPI 181
>pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
8-(6-Bromo-
Benzo[1,
3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)-
Adenine
pdb|1ZWH|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
Radester Amine
pdb|2FXS|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
Radamide
Length = 240
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+L+NNLGTIAKSGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 86 ITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFY 145
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 146 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 205
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 206 EEKRIKEVIKRHSEFVAYPI 225
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 436 VTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXXXX 494
V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 156 VISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIK 215
Query: 495 XHSQFIGYPI 504
HS+F+ YPI
Sbjct: 216 RHSEFVAYPI 225
>pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin
Length = 220
Score = 186 bits (471), Expect = 1e-46, Method: Composition-based stats.
Identities = 91/140 (65%), Positives = 106/140 (75%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+L+NNLGTIA SGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 66 ITPKPEQKVLEIRDSGIGMTKAELINNLGTIANSGTKAFMEALSAGADVSMIGQFGVGFY 125
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 126 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 185
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 186 EEKRIKEVIKRHSEFVAYPI 205
Score = 77.0 bits (188), Expect = 7e-14, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXX 492
+ V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 134 VQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEV 193
Query: 493 XXXHSQFIGYPI 504
HS+F+ YPI
Sbjct: 194 IKRHSEFVAYPI 205
>pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With
Geldanamycin
Length = 220
Score = 185 bits (469), Expect = 2e-46, Method: Composition-based stats.
Identities = 89/140 (63%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+++NN+GTIAKSGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 66 ITPKPEQKVLEIRDSGIGMTKAEVINNIGTIAKSGTKAFMEALSAGADVSMIGQFGVGFY 125
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V + SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 126 SLFLVADRVQMISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 185
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 186 EEKRIKEVIKRHSEFVAYPI 205
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 438 SKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXXXXXH 496
SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY H
Sbjct: 138 SKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRH 197
Query: 497 SQFIGYPI 504
S+F+ YPI
Sbjct: 198 SEFVAYPI 205
>pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99 Ks-
Aa
pdb|3C11|A Chain A, Yeast Hsp82 N-Terminal Domain-Geldanamycin Complex: Effects
Of Mutants 98-99 Ks-Aa
Length = 240
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 106/140 (75%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA+L+NNLGTIA +GTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 86 ITPKPEQKVLEIRDSGIGMTKAELINNLGTIAAAGTKAFMEALSAGADVSMIGQFGVGFY 145
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 146 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 205
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 206 EEKRIKEVIKRHSEFVAYPI 225
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 436 VTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXXXX 494
V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 156 VISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIK 215
Query: 495 XHSQFIGYPI 504
HS+F+ YPI
Sbjct: 216 RHSEFVAYPI 225
>pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin
Length = 220
Score = 183 bits (465), Expect = 5e-46, Method: Composition-based stats.
Identities = 91/140 (65%), Positives = 105/140 (75%), Gaps = 1/140 (0%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFY 1286
I P E+K L I DSGIGMTKA L+N LGTIAKSGTKAFMEAL AGAD+SMIGQFGVGFY
Sbjct: 66 ITPKPEQKVLEIRDSGIGMTKAGLINLLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFY 125
Query: 1287 SAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYX 1345
S +LVAD+V V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 126 SLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYL 185
Query: 1346 XXXXXXXXXXXHSQFIGYPI 1365
HS+F+ YPI
Sbjct: 186 EEKRIKEVIKRHSEFVAYPI 205
Score = 77.0 bits (188), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYXXXXXXXXX 492
+ V SK NDDEQYIWES+AGGSFT+ D +E +GRGT + L +K+DQ EY
Sbjct: 134 VQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEV 193
Query: 493 XXXHSQFIGYPI 504
HS+F+ YPI
Sbjct: 194 IKRHSEFVAYPI 205
>pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From
Plasmodium Falciparum, Pfl1070c In The Presence Of A
Thienopyrimidine Derivative
pdb|3PEH|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From
Plasmodium Falciparum, Pfl1070c In The Presence Of A
Thienopyrimidine Derivative
pdb|3PEJ|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From
Plasmodium Falciparum, Pfl1070c In The Presence Of
Macbecin
pdb|3PEJ|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From
Plasmodium Falciparum, Pfl1070c In The Presence Of
Macbecin
Length = 281
Score = 163 bits (412), Expect = 6e-40, Method: Composition-based stats.
Identities = 82/141 (58%), Positives = 100/141 (70%), Gaps = 2/141 (1%)
Query: 1227 IIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEAL-QAGADISMIGQFGVGF 1285
I NKE+ L+I D+GIGMTK DL+NNLGTIAKSGT F+EA+ ++G D+S+IGQFGVGF
Sbjct: 86 ISANKEKNILSITDTGIGMTKVDLINNLGTIAKSGTSNFLEAISKSGGDMSLIGQFGVGF 145
Query: 1286 YSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPD-NSEPLGRGTKIVLHMKEDQAEY 1344
YSA+LVADKV V +K+NDDEQYIWES+A FTI D L RGT+I LH+KED
Sbjct: 146 YSAFLVADKVIVYTKNNDDEQYIWESTADAKFTIYKDPRGATLKRGTRISLHLKEDATNL 205
Query: 1345 XXXXXXXXXXXXHSQFIGYPI 1365
+SQFI +PI
Sbjct: 206 LNDKKLMDLISKYSQFIQFPI 226
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 436 VTSKHNDDEQYIWESSAGGSFTIKPD-NSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXXX 494
V +K+NDDEQYIWES+A FTI D L RGT+I LH+KED
Sbjct: 157 VYTKNNDDEQYIWESTADAKFTIYKDPRGATLKRGTRISLHLKEDATNLLNDKKLMDLIS 216
Query: 495 XHSQFIGYPI 504
+SQFI +PI
Sbjct: 217 KYSQFIQFPI 226
>pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex With
The Novel Ligand N-Propyl Carboxyamido Adenosine
pdb|1YT2|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n Apo Crystal
Length = 273
Score = 137 bits (344), Expect = 6e-32, Method: Composition-based stats.
Identities = 71/141 (50%), Positives = 91/141 (64%), Gaps = 5/141 (3%)
Query: 1230 NKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFM----EALQAGADIS-MIGQFGVG 1284
+KE+ L + D+G+GMT+ +LV NLGTIAKSGT F+ EA + G S +IGQFGVG
Sbjct: 75 DKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVG 134
Query: 1285 FYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEY 1344
FYSA+LVADKV VTSKHN+D Q+IWES + I LGRGT I L +KE+ ++Y
Sbjct: 135 FYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDY 194
Query: 1345 XXXXXXXXXXXXHSQFIGYPI 1365
+SQFI +PI
Sbjct: 195 LELDTIKNLVKKYSQFINFPI 215
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 436 VTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXXXX 495
VTSKHN+D Q+IWES + I LGRGT I L +KE+ ++Y
Sbjct: 147 VTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKK 206
Query: 496 HSQFIGYPI 504
+SQFI +PI
Sbjct: 207 YSQFINFPI 215
>pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The
Charged Domain In Complex With Neca
pdb|1U2O|B Chain B, Crystal Structure Of The N-Domain Of Grp94 Lacking The
Charged Domain In Complex With Neca
pdb|1TBW|A Chain A, Ligand Induced Conformational Shift In The N-Terminal Domain
Of Grp94, Open Conformation
pdb|1TBW|B Chain B, Ligand Induced Conformational Shift In The N-Terminal Domain
Of Grp94, Open Conformation
pdb|1TC0|A Chain A, Ligand Induced Conformational Shifts In The N-Terminal
Domain Of Grp94, Open Conformation Complexed With The
Physiological Partner Atp
pdb|1TC0|B Chain B, Ligand Induced Conformational Shifts In The N-Terminal
Domain Of Grp94, Open Conformation Complexed With The
Physiological Partner Atp
pdb|1TC6|A Chain A, Ligand Induced Conformational Shift In The N-Terminal Domain
Of Grp94, Open Conformation Adp-Complex
pdb|1TC6|B Chain B, Ligand Induced Conformational Shift In The N-Terminal Domain
Of Grp94, Open Conformation Adp-Complex
pdb|1U0Z|A Chain A, N-Domain Of Grp94 Lacking The Charged Domain In Complex With
Radicicol
pdb|1U0Z|B Chain B, N-Domain Of Grp94 Lacking The Charged Domain In Complex With
Radicicol
pdb|1YSZ|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal Soaked With Neca
pdb|1YT0|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal Soaked With Adp
pdb|1YT1|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal
pdb|1YT1|B Chain B, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal
pdb|2EXL|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin
pdb|2EXL|B Chain B, Grp94 N-Terminal Domain Bound To Geldanamycin
pdb|2FYP|A Chain A, Grp94 In Complex With The Novel Hsp90 Inhibitor Radester
Amine
pdb|2FYP|B Chain B, Grp94 In Complex With The Novel Hsp90 Inhibitor Radester
Amine
pdb|2GFD|A Chain A, Grp94 In Complex With The Novel Hsp90 Inhibitor Radamide
pdb|2GFD|B Chain B, Grp94 In Complex With The Novel Hsp90 Inhibitor Radamide
pdb|2GQP|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand N-Propyl
Carboxyamido Adenosine
pdb|2GQP|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand N-Propyl
Carboxyamido Adenosine
pdb|2HCH|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Amino)ethyl Carboxyamido Adenosine
pdb|2HCH|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Amino)ethyl Carboxyamido Adenosine
pdb|2H8M|A Chain A, N-Domain Of Grp94 In Complex With The 2-Iodo-Neca
pdb|2H8M|B Chain B, N-Domain Of Grp94 In Complex With The 2-Iodo-Neca
pdb|2HG1|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Hydroxyl)ethyl Carboxyamido Adenosine
pdb|2HG1|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Hydroxyl)ethyl Carboxyamido Adenosine
pdb|3O2F|A Chain A, Structure Of The N-Domain Of Grp94 Bound To The Hsp90
Inhibitor Pu-H54
pdb|3O2F|B Chain B, Structure Of The N-Domain Of Grp94 Bound To The Hsp90
Inhibitor Pu-H54
Length = 236
Score = 137 bits (344), Expect = 6e-32, Method: Composition-based stats.
Identities = 71/141 (50%), Positives = 91/141 (64%), Gaps = 5/141 (3%)
Query: 1230 NKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFM----EALQAGADIS-MIGQFGVG 1284
+KE+ L + D+G+GMT+ +LV NLGTIAKSGT F+ EA + G S +IGQFGVG
Sbjct: 75 DKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVG 134
Query: 1285 FYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEY 1344
FYSA+LVADKV VTSKHN+D Q+IWES + I LGRGT I L +KE+ ++Y
Sbjct: 135 FYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDY 194
Query: 1345 XXXXXXXXXXXXHSQFIGYPI 1365
+SQFI +PI
Sbjct: 195 LELDTIKNLVKKYSQFINFPI 215
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 436 VTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXXXX 495
VTSKHN+D Q+IWES + I LGRGT I L +KE+ ++Y
Sbjct: 147 VTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKK 206
Query: 496 HSQFIGYPI 504
+SQFI +PI
Sbjct: 207 YSQFINFPI 215
>pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90 Chaperone
Grp94 In Complex With The Specific Ligand Neca
pdb|1QY8|A Chain A, Crystal Structure Of The N-domain Of The Er Hsp90 Chaperone
Grp94 In Complex With Radicicol
pdb|1QYE|A Chain A, Crystal Structure Of The N-domain Of The Er Hsp90 Chaperone
Grp94 In Complex With 2-chlorodideoxyadenosine
Length = 269
Score = 137 bits (344), Expect = 6e-32, Method: Composition-based stats.
Identities = 71/141 (50%), Positives = 91/141 (64%), Gaps = 5/141 (3%)
Query: 1230 NKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFM----EALQAGADIS-MIGQFGVG 1284
+KE+ L + D+G+GMT+ +LV NLGTIAKSGT F+ EA + G S +IGQFGVG
Sbjct: 71 DKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVG 130
Query: 1285 FYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEY 1344
FYSA+LVADKV VTSKHN+D Q+IWES + I LGRGT I L +KE+ ++Y
Sbjct: 131 FYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDY 190
Query: 1345 XXXXXXXXXXXXHSQFIGYPI 1365
+SQFI +PI
Sbjct: 191 LELDTIKNLVKKYSQFINFPI 211
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 436 VTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXXXX 495
VTSKHN+D Q+IWES + I LGRGT I L +KE+ ++Y
Sbjct: 143 VTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKK 202
Query: 496 HSQFIGYPI 504
+SQFI +PI
Sbjct: 203 YSQFINFPI 211
>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound
pdb|2O1U|B Chain B, Structure Of Full Length Grp94 With Amp-Pnp Bound
pdb|2O1V|A Chain A, Structure Of Full Length Grp94 With Adp Bound
pdb|2O1V|B Chain B, Structure Of Full Length Grp94 With Adp Bound
Length = 666
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 91/141 (64%), Gaps = 5/141 (3%)
Query: 1230 NKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFM----EALQAGADIS-MIGQFGVG 1284
+KE+ L + D+G+GMT+ +LV NLGTIAKSGT F+ EA + G S +IGQFGVG
Sbjct: 88 DKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVG 147
Query: 1285 FYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEY 1344
FYSA+LVADKV VTSKHN+D Q+IWES + I LGRGT I L +KE+ ++Y
Sbjct: 148 FYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDY 207
Query: 1345 XXXXXXXXXXXXHSQFIGYPI 1365
+SQFI +PI
Sbjct: 208 LELDTIKNLVKKYSQFINFPI 228
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+ VTSKHN+D Q+IWES + I LGRGT I L +KE+ ++Y
Sbjct: 158 VIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLV 217
Query: 494 XXHSQFIGYPI 504
+SQFI +PI
Sbjct: 218 KKYSQFINFPI 228
>pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|B Chain B, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|C Chain C, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|D Chain D, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|E Chain E, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
Length = 506
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 91/141 (64%), Gaps = 5/141 (3%)
Query: 1230 NKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFM----EALQAGADIS-MIGQFGVG 1284
+KE+ L + D+G+GMT+ +LV NLGTIAKSGT F+ EA + G S +IGQFGVG
Sbjct: 88 DKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVG 147
Query: 1285 FYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEY 1344
FYSA+LVADKV VTSKHN+D Q+IWES + I LGRGT I L +KE+ ++Y
Sbjct: 148 FYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDY 207
Query: 1345 XXXXXXXXXXXXHSQFIGYPI 1365
+SQFI +PI
Sbjct: 208 LELDTIKNLVKKYSQFINFPI 228
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%)
Query: 434 MTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXX 493
+ VTSKHN+D Q+IWES + I LGRGT I L +KE+ ++Y
Sbjct: 158 VIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLV 217
Query: 494 XXHSQFIGYPI 504
+SQFI +PI
Sbjct: 218 KKYSQFINFPI 228
>pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of
Mutants 168- 169 Ks-Aa
Length = 236
Score = 133 bits (335), Expect = 6e-31, Method: Composition-based stats.
Identities = 69/141 (48%), Positives = 90/141 (63%), Gaps = 5/141 (3%)
Query: 1230 NKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFM----EALQAGADIS-MIGQFGVG 1284
+KE+ L + D+G+GMT+ +LV NLGTIA +GT F+ EA + G S +IGQFGVG
Sbjct: 75 DKEKNLLHVTDTGVGMTREELVKNLGTIAAAGTSEFLNKMTEAQEDGQSTSELIGQFGVG 134
Query: 1285 FYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEY 1344
FYSA+LVADKV VTSKHN+D Q+IWES + I LGRGT I L +KE+ ++Y
Sbjct: 135 FYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDY 194
Query: 1345 XXXXXXXXXXXXHSQFIGYPI 1365
+SQFI +PI
Sbjct: 195 LELDTIKNLVKKYSQFINFPI 215
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 436 VTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXXXX 495
VTSKHN+D Q+IWES + I LGRGT I L +KE+ ++Y
Sbjct: 147 VTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKK 206
Query: 496 HSQFIGYPI 504
+SQFI +PI
Sbjct: 207 YSQFINFPI 215
>pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf14_0417) In Complex With Amppn
Length = 272
Score = 131 bits (329), Expect = 3e-30, Method: Composition-based stats.
Identities = 67/144 (46%), Positives = 98/144 (68%), Gaps = 8/144 (5%)
Query: 1229 PNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAG-ADISMIGQFGVGFYS 1287
P+KE+KTLTI D+GIGM K++L+NNLGTIA+SGT F++ ++ G AD ++IGQFGVGFYS
Sbjct: 125 PDKEKKTLTITDNGIGMDKSELINNLGTIAQSGTAKFLKQIEEGKADSNLIGQFGVGFYS 184
Query: 1288 AYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKP------DNSEPLGRGTKIVLHMKEDQ 1341
++LV+++V V +K +D+ Y W S GSF++ + + G GTKI+LH+KE+
Sbjct: 185 SFLVSNRVEVYTK-KEDQIYRWSSDLKGSFSVNEIKKYDQEYDDIKGSGTKIILHLKEEC 243
Query: 1342 AEYXXXXXXXXXXXXHSQFIGYPI 1365
EY +S+FI +PI
Sbjct: 244 DEYLEDYKLKELIKKYSEFIKFPI 267
Score = 43.9 bits (102), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 442 DDEQYIWESSAGGSFTIKP------DNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXXXX 495
+D+ Y W S GSF++ + + G GTKI+LH+KE+ EY
Sbjct: 199 EDQIYRWSSDLKGSFSVNEIKKYDQEYDDIKGSGTKIILHLKEECDEYLEDYKLKELIKK 258
Query: 496 HSQFIGYPI 504
+S+FI +PI
Sbjct: 259 YSEFIKFPI 267
>pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The
Escherichia Coli Hsp90, Bound To Adp
Length = 235
Score = 114 bits (286), Expect = 3e-25, Method: Composition-based stats.
Identities = 59/141 (41%), Positives = 91/141 (64%), Gaps = 7/141 (4%)
Query: 1230 NKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQA--GADISMIGQFGVGFYS 1287
+K+++TLTI D+G+GMT+ +++++LGTIAKSGTK+F+E+L + D +IGQFGVGFYS
Sbjct: 90 DKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYS 149
Query: 1288 AYLVADKVTVTSK---HNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEY 1344
A++VADKVTV ++ + WES+ G +T+ E RGT+I LH++E + E+
Sbjct: 150 AFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKE--DRGTEITLHLREGEDEF 207
Query: 1345 XXXXXXXXXXXXHSQFIGYPI 1365
+S I P+
Sbjct: 208 LDDWRVRSIISKYSDHIALPV 228
Score = 34.3 bits (77), Expect = 0.53, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 448 WESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXXXXHSQFIGYPI 504
WES+ G +T+ E RGT+I LH++E + E+ +S I P+
Sbjct: 174 WESAGEGEYTVADITKE--DRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPV 228
>pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli
Hsp90, Bound To Adp
pdb|2IOP|B Chain B, Crystal Structure Of Full-Length Htpg, The Escherichia Coli
Hsp90, Bound To Adp
pdb|2IOP|C Chain C, Crystal Structure Of Full-Length Htpg, The Escherichia Coli
Hsp90, Bound To Adp
pdb|2IOP|D Chain D, Crystal Structure Of Full-Length Htpg, The Escherichia Coli
Hsp90, Bound To Adp
pdb|2IOQ|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli
Hsp90
pdb|2IOQ|B Chain B, Crystal Structure Of Full-Length Htpg, The Escherichia Coli
Hsp90
Length = 624
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 91/141 (64%), Gaps = 7/141 (4%)
Query: 1230 NKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQA--GADISMIGQFGVGFYS 1287
+K+++TLTI D+G+GMT+ +++++LGTIAKSGTK+F+E+L + D +IGQFGVGFYS
Sbjct: 70 DKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYS 129
Query: 1288 AYLVADKVTVTSK---HNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEY 1344
A++VADKVTV ++ + WES+ G +T+ E RGT+I LH++E + E+
Sbjct: 130 AFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKE--DRGTEITLHLREGEDEF 187
Query: 1345 XXXXXXXXXXXXHSQFIGYPI 1365
+S I P+
Sbjct: 188 LDDWRVRSIISKYSDHIALPV 208
Score = 34.3 bits (77), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 448 WESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXXXXHSQFIGYPI 504
WES+ G +T+ E RGT+I LH++E + E+ +S I P+
Sbjct: 154 WESAGEGEYTVADITKED--RGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPV 208
>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp
Binding
pdb|1Y4S|B Chain B, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp
Binding
pdb|1Y4U|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp
Binding
pdb|1Y4U|B Chain B, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp
Binding
Length = 559
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 91/141 (64%), Gaps = 7/141 (4%)
Query: 1230 NKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQA--GADISMIGQFGVGFYS 1287
+K+++TLTI D+G+GMT+ +++++LGTIAKSGTK+F+E+L + D +IGQFGVGFYS
Sbjct: 70 DKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYS 129
Query: 1288 AYLVADKVTVTSK---HNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEY 1344
A++VADKVTV ++ + WES+ G +T+ E RGT+I LH++E + E+
Sbjct: 130 AFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKED--RGTEITLHLREGEDEF 187
Query: 1345 XXXXXXXXXXXXHSQFIGYPI 1365
+S I P+
Sbjct: 188 LDDWRVRSIISKYSDHIALPV 208
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 448 WESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYXXXXXXXXXXXXHSQFIGYPI 504
WES+ G +T+ E RGT+I LH++E + E+ +S I P+
Sbjct: 154 WESAGEGEYTVADITKED--RGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPV 208
>pdb|2IKC|A Chain A, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A
Resolution Reveals The Binding Sites For Formate
pdb|2IKC|B Chain B, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A
Resolution Reveals The Binding Sites For Formate
Length = 595
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 179/472 (37%), Gaps = 139/472 (29%)
Query: 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNIC 752
QI T F+D S +YGS P A LR+LS P G
Sbjct: 179 QINSVTSFLDASLVYGSEPSLASRLRNLSS--------------PLGL------------ 212
Query: 753 YDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQH 812
+AV+Q W Y ++ +P E + AR + CFQ
Sbjct: 213 -------------MAVNQEAWDHGLAYPPFNNMKPSPC-----EFINTTAR---VPCFQ- 250
Query: 813 IVYNEWLPILIGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARR 872
GD R ++Q+ LA T+ LR HN +A +L + NP W E +YQEAR+
Sbjct: 251 ----------AGDSRASEQILLATVHTLLLREHNRLARELKRLNPHWDG--EKLYQEARK 298
Query: 873 LVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGE 932
++ Q I + ++LPI++G K + +QGY+ V+P
Sbjct: 299 ILGAFIQIITFRDYLPIVLGSEMQKWI-------PRYQGYNNSVDPR------------- 338
Query: 933 SYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGLHSLIPGTIKLVNER---RVTN 989
+++ AFR H +P T+ ++E R
Sbjct: 339 ---------------------------ISNVFTFAFRFGHMEVPSTVSRLDENYQPRGPE 371
Query: 990 QELPFSSTMQHPGDILEVMDVFDSTLRGLTNQLQQY--QDRFITEQTIDFLF----RVGS 1043
ELP + + I++ + D +RGL + + Q++ +T + + LF ++
Sbjct: 372 AELPLHTLFFNTWRIIKDGGI-DPLVRGLLAKKSKLMNQNKMVTSELRNKLFQPTHKIHG 430
Query: 1044 LSLEKVIVDLV---GLTLGFFYLWYCG--------------GFLLQVTRLSQVYRGVNDI 1086
L + + G+ + +CG + +L +Y+ ++I
Sbjct: 431 FDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQAVLKNKILAKKLLDLYKTPDNI 490
Query: 1087 DYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 1138
D +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 491 DIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 281 GDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTR-LSQVYRGVND 339
G DLAA ++QR RD+G+ Y +R CGLS ++ L + ++ + + L +Y+ ++
Sbjct: 430 GFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQAVLKNKILAKKLLDLYKTPDN 489
Query: 340 IDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 392
ID +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 490 IDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 172 QCNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVS-----SYRVSQVDASPL 226
+C+ + YRT+ G CNN R P GA + A R + YEDG++ + R ++ + +
Sbjct: 14 KCDENSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLAVPFGWTQRKTR-NGFRV 72
Query: 227 PNARVLSRV---FLPDRNISDVH-TRMYLEFSQLVAHDITLNPQ 266
P AR +S +L + + D + + +++++ Q+V HD+ P+
Sbjct: 73 PLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPE 116
>pdb|3R5Q|A Chain A, Crystal Structure Of Sheep Lactoperoxidase In Complex With
Tetrahydrofuran At 2.7 A Resolution
Length = 595
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 179/472 (37%), Gaps = 139/472 (29%)
Query: 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNIC 752
QI T F+D S +YGS P A LR+LS P G
Sbjct: 179 QINSVTSFLDASLVYGSEPXLASRLRNLSS--------------PLGL------------ 212
Query: 753 YDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQH 812
+AV+Q W Y ++ +P E + AR + CFQ
Sbjct: 213 -------------MAVNQEAWDHGLAYPPFNNMKPSPC-----EFINTTAR---VPCFQ- 250
Query: 813 IVYNEWLPILIGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARR 872
GD R ++Q+ LA T+ LR HN +A +L + NP W E +YQEAR+
Sbjct: 251 ----------AGDSRASEQILLATVHTLLLREHNRLARELKRLNPHWDG--EKLYQEARK 298
Query: 873 LVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGE 932
++ Q I + ++LPI++G K + +QGY+ V+P
Sbjct: 299 ILGAFIQIITFRDYLPIVLGSEMQKWI-------PRYQGYNNSVDPR------------- 338
Query: 933 SYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGLHSLIPGTIKLVNER---RVTN 989
+++ AFR H +P T+ ++E R
Sbjct: 339 ---------------------------ISNVFTFAFRFGHMEVPSTVSRLDENYQPRGPE 371
Query: 990 QELPFSSTMQHPGDILEVMDVFDSTLRGLTNQLQQY--QDRFITEQTIDFLF----RVGS 1043
ELP + + I++ + D +RGL + + Q++ +T + + LF ++
Sbjct: 372 AELPLHTLFFNTWRIIKDGGI-DPLVRGLLAKKSKLMNQNKMVTSELRNKLFQPTHKIHG 430
Query: 1044 LSLEKVIVDLV---GLTLGFFYLWYCG--------------GFLLQVTRLSQVYRGVNDI 1086
L + + G+ + +CG + +L +Y+ ++I
Sbjct: 431 FDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQAVLKNKILAKKLLDLYKTPDNI 490
Query: 1087 DYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 1138
D +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 491 DIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 281 GDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTR-LSQVYRGVND 339
G DLAA ++QR RD+G+ Y +R CGLS ++ L + ++ + + L +Y+ ++
Sbjct: 430 GFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQAVLKNKILAKKLLDLYKTPDN 489
Query: 340 IDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 392
ID +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 490 IDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 172 QCNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVS-----SYRVSQVDASPL 226
+C+ + YRT+ G CNN R P GA + A R + YEDG++ + R ++ + +
Sbjct: 14 KCDENSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLAVPFGWTQRKTR-NGFRV 72
Query: 227 PNARVLSRV---FLPDRNISDVH-TRMYLEFSQLVAHDITLNPQ 266
P AR +S +L + + D + + +++++ Q+V HD+ P+
Sbjct: 73 PLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPE 116
>pdb|2E9E|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Nitrate At 3.25 A Resolution
pdb|2E9E|B Chain B, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Nitrate At 3.25 A Resolution
pdb|2OJV|A Chain A, Crystal Structure Of A Ternary Complex Of Goat
Lactoperoxidase With Cyanide And Iodide Ions At 2.4 A
Resolution
pdb|2EFB|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Phosphate At 2.94 A Resolution
pdb|2EFB|B Chain B, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Phosphate At 2.94 A Resolution
pdb|2EHA|A Chain A, Crystal Structure Of Goat Lactoperoxidase Complexed With
Formate Anion At 3.3 A Resolution
pdb|2EHA|B Chain B, Crystal Structure Of Goat Lactoperoxidase Complexed With
Formate Anion At 3.3 A Resolution
Length = 595
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 176/455 (38%), Gaps = 105/455 (23%)
Query: 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNIC 752
QI T F+D S +YGS P A LR+LS P G
Sbjct: 179 QINAVTSFLDASLVYGSEPSLASRLRNLSS--------------PLGL------------ 212
Query: 753 YDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQH 812
+AV+Q W Y ++ +P E + A + CFQ
Sbjct: 213 -------------MAVNQEAWDHGLAYPPFNNVKPSPC-----EFINTTAH---VPCFQ- 250
Query: 813 IVYNEWLPILIGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARR 872
GD R ++Q+ LA T+ LR HN +A +L + NP W E++YQEAR+
Sbjct: 251 ----------AGDSRASEQILLATVHTLLLREHNRLARELKRLNPHWDG--EMLYQEARK 298
Query: 873 LVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGE 932
++ Q I + ++LPI++G K + P GY DP + S + F AFR
Sbjct: 299 ILGAFIQIITFRDYLPIVLGSEMQKWI---PPYQGYNNSVDPRI--SNVFTF---AFRFG 350
Query: 933 SYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFR-----GLHSLIPGTI----KLVN 983
+S Y Q + PE L +R G+ L+ G + KL+N
Sbjct: 351 HMEVPSTVSRLDENY-QPWGPEAE-LPLHTLFFNTWRIIKDGGIDPLVRGLLAKNSKLMN 408
Query: 984 ERRVTNQELPFSSTMQHPGDILEVMDVFDSTLRGLTNQLQQYQDRFITEQTIDFLFRVGS 1043
+ ++ EL + + P + D+ LQ+ +D + F
Sbjct: 409 QNKMVTSEL--RNKLFQPTHKVHGFDL-------AAINLQRCRDHGMPGYNSWRGF--CG 457
Query: 1044 LSLEKVIVDLVGLTLGFFYLWYCGGFLLQVTRLSQVYRGVNDIDYYIGGLLESVIRGTLS 1103
LS K + L + + +L +Y+ ++ID +IGG E ++
Sbjct: 458 LSQPKTLKGLQAVLKN----------KVLAKKLLDLYKTPDNIDIWIGGNAEPMVERGRV 507
Query: 1104 SPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 1138
P C+ F + + GDR+++E NPG FT
Sbjct: 508 GPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 281 GDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTR-LSQVYRGVND 339
G DLAA ++QR RD+G+ Y +R CGLS ++ L + ++ + + L +Y+ ++
Sbjct: 430 GFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQAVLKNKVLAKKLLDLYKTPDN 489
Query: 340 IDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 392
ID +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 490 IDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 10/103 (9%)
Query: 173 CNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVS-----SYRVSQVDASPLP 227
C+ ++ YRT+ G CNN R P GA + A R + YEDG++ + R ++ + +P
Sbjct: 15 CDEQSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLAVPFGWTQRKTR-NGFRVP 73
Query: 228 NARVLSRV---FLPDRNISDVH-TRMYLEFSQLVAHDITLNPQ 266
AR +S +L + + D + + +++++ Q+V HD+ P+
Sbjct: 74 LAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPE 116
>pdb|2R5L|A Chain A, Crystal Structure Of Lactoperoxidase At 2.4a Resolution
pdb|3N8F|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Thiocyanate At 3.2 A Resolution
pdb|3N8F|B Chain B, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Thiocyanate At 3.2 A Resolution
pdb|3NIU|A Chain A, Crystal Structure Of The Complex Of Dimeric Goat
Lactoperoxidase With Diethylene Glycol At 2.9 A
Resolution
pdb|3NIU|B Chain B, Crystal Structure Of The Complex Of Dimeric Goat
Lactoperoxidase With Diethylene Glycol At 2.9 A
Resolution
pdb|3NAK|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Hypothiocyanite At 3.3 A Resolution
pdb|3NAK|B Chain B, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Hypothiocyanite At 3.3 A Resolution
pdb|3QF1|A Chain A, Crystal Structure Of The Complex Of Caprine Lactoperoxidase
With Diethylenediamine At 2.6a Resolution
pdb|3RKE|A Chain A, Crystal Structure Of Goat Lactoperoxidase Complexed With A
Tightly Bound Inhibitor, 4-Aminophenyl-4h-Imidazole-1-Yl
Methanone At 2.3 A Resolution
pdb|3R55|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Pyrazinamide At 2.1 A Resolution
pdb|3SXV|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Amitrole At 2.1 A Resolution
Length = 595
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 176/455 (38%), Gaps = 105/455 (23%)
Query: 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNIC 752
QI T F+D S +YGS P A LR+LS P G
Sbjct: 179 QINAVTSFLDASLVYGSEPXLASRLRNLSS--------------PLGL------------ 212
Query: 753 YDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQH 812
+AV+Q W Y ++ +P E + A + CFQ
Sbjct: 213 -------------MAVNQEAWDHGLAYPPFNNVKPSPC-----EFINTTAH---VPCFQ- 250
Query: 813 IVYNEWLPILIGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARR 872
GD R ++Q+ LA T+ LR HN +A +L + NP W E++YQEAR+
Sbjct: 251 ----------AGDSRASEQILLATVHTLLLREHNRLARELKRLNPHWDG--EMLYQEARK 298
Query: 873 LVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGE 932
++ Q I + ++LPI++G K + P GY DP + S + F AFR
Sbjct: 299 ILGAFIQIITFRDYLPIVLGSEMQKWI---PPYQGYNNSVDPRI--SNVFTF---AFRFG 350
Query: 933 SYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFR-----GLHSLIPGTI----KLVN 983
+S Y Q + PE L +R G+ L+ G + KL+N
Sbjct: 351 HMEVPSTVSRLDENY-QPWGPEAE-LPLHTLFFNTWRIIKDGGIDPLVRGLLAKNSKLMN 408
Query: 984 ERRVTNQELPFSSTMQHPGDILEVMDVFDSTLRGLTNQLQQYQDRFITEQTIDFLFRVGS 1043
+ ++ EL + + P + D+ LQ+ +D + F
Sbjct: 409 QNKMVTSEL--RNKLFQPTHKVHGFDL-------AAINLQRCRDHGMPGYNSWRGF--CG 457
Query: 1044 LSLEKVIVDLVGLTLGFFYLWYCGGFLLQVTRLSQVYRGVNDIDYYIGGLLESVIRGTLS 1103
LS K + L + + +L +Y+ ++ID +IGG E ++
Sbjct: 458 LSQPKTLKGLQAVLKN----------KVLAKKLLDLYKTPDNIDIWIGGNAEPMVERGRV 507
Query: 1104 SPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 1138
P C+ F + + GDR+++E NPG FT
Sbjct: 508 GPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 281 GDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTR-LSQVYRGVND 339
G DLAA ++QR RD+G+ Y +R CGLS ++ L + ++ + + L +Y+ ++
Sbjct: 430 GFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQAVLKNKVLAKKLLDLYKTPDN 489
Query: 340 IDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 392
ID +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 490 IDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 10/103 (9%)
Query: 173 CNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVS-----SYRVSQVDASPLP 227
C+ ++ YRT+ G CNN R P GA + A R + YEDG++ + R ++ + +P
Sbjct: 15 CDEQSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLAVPFGWTQRKTR-NGFRVP 73
Query: 228 NARVLSRV---FLPDRNISDVH-TRMYLEFSQLVAHDITLNPQ 266
AR +S +L + + D + + +++++ Q+V HD+ P+
Sbjct: 74 LAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPE 116
>pdb|1CXP|C Chain C, Cryogenic Crystal Structure Of Human Myeloperoxidase
Isoform C
pdb|1CXP|D Chain D, Cryogenic Crystal Structure Of Human Myeloperoxidase
Isoform C
pdb|1D2V|C Chain C, Crystal Structure Of Bromide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D2V|D Chain D, Crystal Structure Of Bromide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D7W|C Chain C, Crystal Structure Of Human Myeloperoxidase Isoform C
Complexed With Cyanide And Bromide At Ph 4.0
pdb|1D7W|D Chain D, Crystal Structure Of Human Myeloperoxidase Isoform C
Complexed With Cyanide And Bromide At Ph 4.0
pdb|1D5L|C Chain C, Crystal Structure Of Cyanide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D5L|D Chain D, Crystal Structure Of Cyanide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1DNU|C Chain C, Structural Analyses Of Human Myeloperoxidase-Thiocyanate
Complex
pdb|1DNU|D Chain D, Structural Analyses Of Human Myeloperoxidase-Thiocyanate
Complex
pdb|1DNW|C Chain C, Human Myeloperoxidase-Cyanide-Thiocyanate Complex
pdb|1DNW|D Chain D, Human Myeloperoxidase-Cyanide-Thiocyanate Complex
pdb|4DL1|C Chain C, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|D Chain D, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|G Chain G, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|H Chain H, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|K Chain K, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|L Chain L, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|O Chain O, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|P Chain P, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
Length = 466
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 77/142 (54%), Gaps = 12/142 (8%)
Query: 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSR--GKLRVREV---NGRTFMP----TGDPSN 743
QI T F+D S +YGS AR LR++S G L V + NGR +P DP
Sbjct: 51 QINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCL 110
Query: 744 CVNASSNI-CYDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEA 802
N S+ I C+ AGD R ++ +L T+ LR HN +A +L NP W E +YQEA
Sbjct: 111 LTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDG--ERLYQEA 168
Query: 803 RRLVIGCFQHIVYNEWLPILIG 824
R++V Q I Y ++LP+++G
Sbjct: 169 RKIVGAMVQIITYRDYLPLVLG 190
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 25/179 (13%)
Query: 227 PNARV-LSRVFLPDRNISDVHTRMYLE------FSQLVAHDITLNPQESTAVPTRGLR-- 277
PN RV LSRVF R+ LE L+A LN Q AV R
Sbjct: 243 PNPRVPLSRVFF-------ASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLF 295
Query: 278 ---GEFGDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTR-LSQV 333
G DL A ++QR RD+GL Y +R CGL + G L + + ++ R L +
Sbjct: 296 EQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQ 355
Query: 334 YRGVNDIDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 392
Y N+ID ++GG+ E + R P C+ F + + GDR+++E N G F+
Sbjct: 356 YGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWE-----NEGVFS 409
>pdb|1MYP|C Chain C, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3
Angstroms Resolution
pdb|1MYP|D Chain D, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3
Angstroms Resolution
pdb|1MHL|C Chain C, Crystal Structure Of Human Myeloperoxidase Isoform C
Crystallized In Space Group P2(1) At Ph 5.5 And 20 Deg C
pdb|1MHL|D Chain D, Crystal Structure Of Human Myeloperoxidase Isoform C
Crystallized In Space Group P2(1) At Ph 5.5 And 20 Deg C
Length = 466
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 77/142 (54%), Gaps = 12/142 (8%)
Query: 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSR--GKLRVREV---NGRTFMP----TGDPSN 743
QI T F+D S +YGS AR LR++S G L V + NGR +P DP
Sbjct: 51 QINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCL 110
Query: 744 CVNASSNI-CYDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEA 802
N S+ I C+ AGD R ++ +L T+ LR HN +A +L NP W E +YQEA
Sbjct: 111 LTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDG--ERLYQEA 168
Query: 803 RRLVIGCFQHIVYNEWLPILIG 824
R++V Q I Y ++LP+++G
Sbjct: 169 RKIVGAMVQIITYRDYLPLVLG 190
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 25/179 (13%)
Query: 227 PNARV-LSRVFLPDRNISDVHTRMYLE------FSQLVAHDITLNPQESTAVPTRGLR-- 277
PN RV LSRVF R+ LE L+A LN Q AV R
Sbjct: 243 PNPRVPLSRVFF-------ASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLF 295
Query: 278 ---GEFGDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTR-LSQV 333
G DL A ++QR RD+GL Y +R CGL + G L + + ++ R L +
Sbjct: 296 EQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQ 355
Query: 334 YRGVNDIDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 392
Y N+ID ++GG+ E + R P C+ F + + GDR+++E N G F+
Sbjct: 356 YGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWE-----NEGVFS 409
>pdb|3F9P|C Chain C, Crystal Structure Of Myeloperoxidase From Human Leukocytes
pdb|3F9P|D Chain D, Crystal Structure Of Myeloperoxidase From Human Leukocytes
pdb|3ZS0|C Chain C, Human Myeloperoxidase Inactivated By Tx2
pdb|3ZS0|D Chain D, Human Myeloperoxidase Inactivated By Tx2
pdb|3ZS1|C Chain C, Human Myeloperoxidase Inactivated By Tx5
pdb|3ZS1|D Chain D, Human Myeloperoxidase Inactivated By Tx5
Length = 467
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 77/142 (54%), Gaps = 12/142 (8%)
Query: 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSR--GKLRVREV---NGRTFMP----TGDPSN 743
QI T F+D S +YGS AR LR++S G L V + NGR +P DP
Sbjct: 51 QINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCL 110
Query: 744 CVNASSNI-CYDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEA 802
N S+ I C+ AGD R ++ +L T+ LR HN +A +L NP W E +YQEA
Sbjct: 111 LTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDG--ERLYQEA 168
Query: 803 RRLVIGCFQHIVYNEWLPILIG 824
R++V Q I Y ++LP+++G
Sbjct: 169 RKIVGAMVQIITYRDYLPLVLG 190
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 25/179 (13%)
Query: 227 PNARV-LSRVFLPDRNISDVHTRMYLE------FSQLVAHDITLNPQESTAVPTRGLR-- 277
PN RV LSRVF R+ LE L+A LN Q AV R
Sbjct: 243 PNPRVPLSRVFF-------ASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLF 295
Query: 278 ---GEFGDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTR-LSQV 333
G DL A ++QR RD+GL Y +R CGL + G L + + ++ R L +
Sbjct: 296 EQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQ 355
Query: 334 YRGVNDIDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 392
Y N+ID ++GG+ E + R P C+ F + + GDR+++E N G F+
Sbjct: 356 YGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWE-----NEGVFS 409
>pdb|2GJ1|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.3a
Resolution
Length = 583
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 180/469 (38%), Gaps = 133/469 (28%)
Query: 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNIC 752
QI T F+D S +YGS P A LR+LS P G
Sbjct: 167 QINAVTSFLDASLVYGSEPSLASRLRNLSS--------------PLGL------------ 200
Query: 753 YDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQH 812
+AV+Q W Y+ + +P E + AR + CF
Sbjct: 201 -------------MAVNQEAWDHGLAYLPFNNKKPSPC-----EFINTTAR---VPCF-- 237
Query: 813 IVYNEWLPILIGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARR 872
L GD R ++Q+ LA + T+ LR HN +A +L + NP W+ E +YQEAR+
Sbjct: 238 ---------LAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNG--EKLYQEARK 286
Query: 873 LVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGE 932
++ Q I + ++LPI++G K + P GY DP + S + F AFR
Sbjct: 287 ILGAFIQIITFRDYLPIVLGSEMQKWI---PPYQGYNNSVDPRI--SNVFTF---AFRFG 338
Query: 933 SYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGLHSLIPGTIKLVNERRVTNQEL 992
+S Y Q + PE A LH+L T +++ +
Sbjct: 339 HMEVPSTVSRLDENY-QPWGPE------------AELPLHTLFFNTWRIIKD-------- 377
Query: 993 PFSSTMQHPGDILEVMDVFDSTLRGLTNQLQQY--QDRFITEQTIDFLF----RVGSLSL 1046
G I D +RGL + + QD+ +T + + LF ++ L
Sbjct: 378 ---------GGI-------DPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHGFDL 421
Query: 1047 EKVIVDLV---GLTLGFFYLWYCG--------------GFLLQVTRLSQVYRGVNDIDYY 1089
+ + G+ + +CG + +L +Y+ ++ID +
Sbjct: 422 AAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDNIDIW 481
Query: 1090 IGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 1138
IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 482 IGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 525
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 281 GDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTR-LSQVYRGVND 339
G DLAA ++QR RD+G+ Y +R CGLS ++ L + ++ + + L +Y+ ++
Sbjct: 418 GFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDN 477
Query: 340 IDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 392
ID +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 478 IDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 525
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 172 QCNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVS-----SYRVSQVDASPL 226
+C+ + YRT+ G CNN R P GA + A R + YEDG++ + R ++ + +
Sbjct: 2 KCDENSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQRKTR-NGFRV 60
Query: 227 PNARVLSRV---FLPDRNISDVH-TRMYLEFSQLVAHDITLNPQ 266
P AR +S +L + + D + + +++++ Q+V HD+ P+
Sbjct: 61 PLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPE 104
>pdb|2IPS|A Chain A, Crystal Structure Of A Ternary Complex Of Bovine
Lactoperoxidase With Thiocyanate And Iodide At 3.1 A
Resolution
pdb|2NQX|A Chain A, Crystal Structure Of Bovine Lactoperoxidase With Iodide Ions
At 2.9a Resolution
Length = 595
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 180/469 (38%), Gaps = 133/469 (28%)
Query: 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNIC 752
QI T F+D S +YGS P A LR+LS P G
Sbjct: 179 QINAVTSFLDASLVYGSEPSLASRLRNLSS--------------PLGL------------ 212
Query: 753 YDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQH 812
+AV+Q W Y+ + +P E + AR + CF
Sbjct: 213 -------------MAVNQEAWDHGLAYLPFNNKKPSPC-----EFINTTAR---VPCF-- 249
Query: 813 IVYNEWLPILIGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARR 872
L GD R ++Q+ LA + T+ LR HN +A +L + NP W+ E +YQEAR+
Sbjct: 250 ---------LAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNG--EKLYQEARK 298
Query: 873 LVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGE 932
++ Q I + ++LPI++G K + P GY DP + S + F AFR
Sbjct: 299 ILGAFIQIITFRDYLPIVLGSEMQKWI---PPYQGYNNSVDPRI--SNVFTF---AFRFG 350
Query: 933 SYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGLHSLIPGTIKLVNERRVTNQEL 992
+S Y Q + PE A LH+L T +++ +
Sbjct: 351 HMEVPSTVSRLDENY-QPWGPE------------AELPLHTLFFNTWRIIKD-------- 389
Query: 993 PFSSTMQHPGDILEVMDVFDSTLRGLTNQLQQY--QDRFITEQTIDFLF----RVGSLSL 1046
G I D +RGL + + QD+ +T + + LF ++ L
Sbjct: 390 ---------GGI-------DPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHGFDL 433
Query: 1047 EKVIVDLV---GLTLGFFYLWYCG--------------GFLLQVTRLSQVYRGVNDIDYY 1089
+ + G+ + +CG + +L +Y+ ++ID +
Sbjct: 434 AAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDNIDIW 493
Query: 1090 IGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 1138
IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 494 IGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 281 GDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTR-LSQVYRGVND 339
G DLAA ++QR RD+G+ Y +R CGLS ++ L + ++ + + L +Y+ ++
Sbjct: 430 GFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDN 489
Query: 340 IDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 392
ID +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 490 IDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 172 QCNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVS-----SYRVSQVDASPL 226
+C+ + YRT+ G CNN R P GA + A R + YEDG++ + R ++ + +
Sbjct: 14 KCDENSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQRKTR-NGFRV 72
Query: 227 PNARVLSRV---FLPDRNISDVH-TRMYLEFSQLVAHDITLNPQ 266
P AR +S +L + + D + + +++++ Q+V HD+ P+
Sbjct: 73 PLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPE 116
>pdb|2PT3|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.34 A
Resolution Reveals Multiple Anion Binding Sites
pdb|2PUM|A Chain A, Crystal Structure Of Bovine Lactoperoxidase Complex With
Catechol And Iodide At 2.7 A Resolution
pdb|2QPK|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Salicylhydroxamic Acid At 2.34 A Resolution
pdb|2QQT|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Acetyl Salicylic Acid At 2.5 A Resolution
pdb|2QRB|A Chain A, Crystal Structure Of Chloride Saturated Bovine
Lactoperoxidase At 2.5 A Resolution Shows Multiple Halide
Binding Sites
pdb|3BXI|A Chain A, Structure Of The Complex Of Bovine Lactoperoxidase With Its
Catalyzed Product Hypothiocyanate Ion At 2.3a Resolution
pdb|3ERI|A Chain A, First Structural Evidence Of Substrate Specificity In
Mammalian Peroxidases: Crystal Structures Of Substrate
Complexes With Lactoperoxidases From Two Different
Species
pdb|3GC1|A Chain A, Crystal Structure Of Bovine Lactoperoxidase
pdb|3GCJ|A Chain A, Mode Of Ligand Binding And Assignment Of Subsites In
Mammalian Peroxidases: Crystal Structure Of
Lactoperoxidase Complexes With Acetyl Salycylic Acid,
Salicylhydroxamic Acid And Benzylhydroxamic Acid
pdb|3GCK|A Chain A, Mode Of Ligand Binding And Assignment Of Subsites In
Mammalian Peroxidases: Crystal Structure Of
Lactoperoxidase Complexes With Acetyl Salycylic Acid,
Salicylhydroxamic Acid And Benzylhydroxamic Acid
pdb|3GCL|A Chain A, Mode Of Ligand Binding And Assignment Of Subsites In
Mammalian Peroxidases: Crystal Structure Of
Lactoperoxidase Complexes With Acetyl Salycylic Acid,
Salicylhydroxamic Acid And Benzylhydroxamic Acid
pdb|3I6N|A Chain A, Mode Of Binding Of The Tuberculosis Prodrug Isoniazid To
Peroxidases: Crystal Structure Of Bovine Lactoperoxidase
With Isoniazid At 2.7 Resolution
pdb|3KRQ|A Chain A, Crystal Structure Of The Complex Of Lactoperoxidase With A
Potent Inhibitor Amino-Triazole At 2.2a Resolution
pdb|3NYH|A Chain A, Crystal Structure Of Lactoperoxidase Complexed
Simultaneously With Thiocyanate Ion, Iodide Ion, Bromide
Ion, Chloride Ion Through The Substrate Diffusion Channel
Reveals A Preferential Queue Of The Inorganic Substrates
Towards The Distal Heme Cavity
pdb|3OGW|A Chain A, Structure Of The Complex Of Bovine Lactoperoxidase With
Indomethacin At 1.9a Resolution
pdb|3PY4|A Chain A, Crystal Structure Of Bovine Lactoperoxidase In Complex With
Paracetamol At 2.4a Resolution
pdb|3Q9K|A Chain A, Crystal Structure Of Bovine Lactoperoxidase Complexed With
Phenyl Isothiocyanate At 1.7 A Resolution
pdb|3QL6|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Nimesulide At 1.7 A Resolution
pdb|3S4F|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With 1h- Pyrazolo[4,3-C] Pyridine At 1.99 A Resolution
pdb|3R4X|A Chain A, Crystal Structure Of Bovine Lactoperoxidase Complexed With
Pyrazine-2- Carboxamide At 2 A Resolution
pdb|3R5O|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With 4- Allyl-2-Methoxyphenol At 2.6 A Resolution
pdb|3TGY|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Ascorbic Acid At 2.35 A Resolution
pdb|3TUW|A Chain A, Crystal Structure Of Lactoperoxidase Complexed With
Pyrazinamide At 2.2a Resolution
pdb|3UBA|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With P- Hydroxycinnamic Acid At 2.6 A Resolution
pdb|3V6Q|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Carbon Monoxide At 2.0 A Resolution
pdb|4GM7|A Chain A, Structure Of Cinnamic Acid Bound Bovine Lactoperoxidase At
2.6a Resolution.
pdb|4GN6|A Chain A, Structure Of Paracetamol Bound Bovine Lactoperoxidase At
2.45a Resolution
Length = 595
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 180/469 (38%), Gaps = 133/469 (28%)
Query: 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNIC 752
QI T F+D S +YGS P A LR+LS P G
Sbjct: 179 QINAVTSFLDASLVYGSEPXLASRLRNLSS--------------PLGL------------ 212
Query: 753 YDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQH 812
+AV+Q W Y+ + +P E + AR + CF
Sbjct: 213 -------------MAVNQEAWDHGLAYLPFNNKKPSPC-----EFINTTAR---VPCF-- 249
Query: 813 IVYNEWLPILIGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARR 872
L GD R ++Q+ LA + T+ LR HN +A +L + NP W+ E +YQEAR+
Sbjct: 250 ---------LAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNG--EKLYQEARK 298
Query: 873 LVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGE 932
++ Q I + ++LPI++G K + P GY DP + S + F AFR
Sbjct: 299 ILGAFIQIITFRDYLPIVLGSEMQKWI---PPYQGYNNSVDPRI--SNVFTF---AFRFG 350
Query: 933 SYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGLHSLIPGTIKLVNERRVTNQEL 992
+S Y Q + PE A LH+L T +++ +
Sbjct: 351 HMEVPSTVSRLDENY-QPWGPE------------AELPLHTLFFNTWRIIKD-------- 389
Query: 993 PFSSTMQHPGDILEVMDVFDSTLRGLTNQLQQY--QDRFITEQTIDFLF----RVGSLSL 1046
G I D +RGL + + QD+ +T + + LF ++ L
Sbjct: 390 ---------GGI-------DPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHGFDL 433
Query: 1047 EKVIVDLV---GLTLGFFYLWYCG--------------GFLLQVTRLSQVYRGVNDIDYY 1089
+ + G+ + +CG + +L +Y+ ++ID +
Sbjct: 434 AAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDNIDIW 493
Query: 1090 IGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 1138
IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 494 IGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 281 GDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTR-LSQVYRGVND 339
G DLAA ++QR RD+G+ Y +R CGLS ++ L + ++ + + L +Y+ ++
Sbjct: 430 GFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDN 489
Query: 340 IDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 392
ID +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 490 IDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 172 QCNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVS-----SYRVSQVDASPL 226
+C+ + YRT+ G CNN R P GA + A R + YEDG++ + R ++ + +
Sbjct: 14 KCDENSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQRKTR-NGFRV 72
Query: 227 PNARVLSRV---FLPDRNISDVH-TRMYLEFSQLVAHDITLNPQ 266
P AR +S +L + + D + + +++++ Q+V HD+ P+
Sbjct: 73 PLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPE 116
>pdb|2GJM|A Chain A, Crystal Structure Of Buffalo Lactoperoxidase At 2.75a
Resolution
Length = 583
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 177/472 (37%), Gaps = 139/472 (29%)
Query: 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNIC 752
QI T F+D S +YGS P A LR+LS P G
Sbjct: 167 QINAVTSFLDASLVYGSEPSLASRLRNLSS--------------PLGL------------ 200
Query: 753 YDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQH 812
+AV+Q W Y+ + +P E + AR + CF
Sbjct: 201 -------------MAVNQEAWDHGLAYLPFNNKKPSPC-----EFINTTAR---VPCF-- 237
Query: 813 IVYNEWLPILIGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARR 872
L GD R ++Q+ LA + T+ LR HN +A +L + NP W+ E +YQEAR+
Sbjct: 238 ---------LAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNG--EKLYQEARK 286
Query: 873 LVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGE 932
++ Q I + ++LPI++G K + P GY DP + S + F
Sbjct: 287 ILGAFIQIITFRDYLPIVLGSEMQKWI---PPYQGYNNSVDPRI--SNVFTF-------- 333
Query: 933 SYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGLHSLIPGTIKLVNERRV---TN 989
AFR H +P T+ ++E
Sbjct: 334 ----------------------------------AFRFGHMEVPSTVSRLDENYQPWGPE 359
Query: 990 QELPFSSTMQHPGDILEVMDVFDSTLRGLTNQLQQY--QDRFITEQTIDFLF----RVGS 1043
ELP + + I++ + D RGL + + QD+ +T + + LF ++
Sbjct: 360 AELPLHTLFFNTWRIIKDGGI-DPLTRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHG 418
Query: 1044 LSLEKVIVDLV---GLTLGFFYLWYCG--------------GFLLQVTRLSQVYRGVNDI 1086
L + + G+ + +CG + +L +Y+ ++I
Sbjct: 419 FDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDNI 478
Query: 1087 DYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 1138
D +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 479 DIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 525
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 281 GDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTR-LSQVYRGVND 339
G DLAA ++QR RD+G+ Y +R CGLS ++ L + ++ + + L +Y+ ++
Sbjct: 418 GFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDN 477
Query: 340 IDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 392
ID +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 478 IDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 525
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 172 QCNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVS-----SYRVSQVDASPL 226
+C+ + YRT+ G CNN R P GA + A R + YEDG++ + R ++ + +
Sbjct: 2 KCDENSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQRKTR-NGFRV 60
Query: 227 PNARVLSRV---FLPDRNISDVH-TRMYLEFSQLVAHDITLNPQ 266
P AR +S +L + + D + + +++++ Q+V HD+ P+
Sbjct: 61 PLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPE 104
>pdb|3ERH|A Chain A, First Structural Evidence Of Substrate Specificity In
Mammalian Peroxidases: Crystal Structures Of Substrate
Complexes With Lactoperoxidases From Two Different
Species
pdb|3FAQ|A Chain A, Crystal Struture Of Lactoperoxidase Complex With Cyanide
Length = 595
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 177/472 (37%), Gaps = 139/472 (29%)
Query: 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNIC 752
QI T F+D S +YGS P A LR+LS P G
Sbjct: 179 QINAVTSFLDASLVYGSEPXLASRLRNLSS--------------PLGL------------ 212
Query: 753 YDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQH 812
+AV+Q W Y+ + +P E + AR + CF
Sbjct: 213 -------------MAVNQEAWDHGLAYLPFNNKKPSPC-----EFINTTAR---VPCF-- 249
Query: 813 IVYNEWLPILIGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARR 872
L GD R ++Q+ LA + T+ LR HN +A +L + NP W+ E +YQEAR+
Sbjct: 250 ---------LAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNG--EKLYQEARK 298
Query: 873 LVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGE 932
++ Q I + ++LPI++G K + P GY DP + S + F
Sbjct: 299 ILGAFIQIITFRDYLPIVLGSEMQKWI---PPYQGYNNSVDPRI--SNVFTF-------- 345
Query: 933 SYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGLHSLIPGTIKLVNERRV---TN 989
AFR H +P T+ ++E
Sbjct: 346 ----------------------------------AFRFGHMEVPSTVSRLDENYQPWGPE 371
Query: 990 QELPFSSTMQHPGDILEVMDVFDSTLRGLTNQLQQY--QDRFITEQTIDFLF----RVGS 1043
ELP + + I++ + D RGL + + QD+ +T + + LF ++
Sbjct: 372 AELPLHTLFFNTWRIIKDGGI-DPLTRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHG 430
Query: 1044 LSLEKVIVDLV---GLTLGFFYLWYCG--------------GFLLQVTRLSQVYRGVNDI 1086
L + + G+ + +CG + +L +Y+ ++I
Sbjct: 431 FDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDNI 490
Query: 1087 DYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 1138
D +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 491 DIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 281 GDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTR-LSQVYRGVND 339
G DLAA ++QR RD+G+ Y +R CGLS ++ L + ++ + + L +Y+ ++
Sbjct: 430 GFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDN 489
Query: 340 IDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 392
ID +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 490 IDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 172 QCNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVS-----SYRVSQVDASPL 226
+C+ + YRT+ G CNN R P GA + A R + YEDG++ + R ++ + +
Sbjct: 14 KCDENSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQRKTR-NGFRV 72
Query: 227 PNARVLSRV---FLPDRNISDVH-TRMYLEFSQLVAHDITLNPQ 266
P AR +S +L + + D + + +++++ Q+V HD+ P+
Sbjct: 73 PLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPE 116
>pdb|2O86|A Chain A, Crystal Structure Of A Ternary Complex Of Buffalo
Lactoperoxidase With Nitrate And Iodide At 2.8 A
Resolution
Length = 595
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 177/472 (37%), Gaps = 139/472 (29%)
Query: 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNIC 752
QI T F+D S +YGS P A L++LS P G
Sbjct: 179 QINAVTSFLDASLVYGSEPSLASRLQNLSS--------------PLGL------------ 212
Query: 753 YDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQH 812
+AV+Q W Y+ + +P E + AR + CF
Sbjct: 213 -------------MAVNQEAWDHGLAYLPFNNRKPSPC-----EFINTTAR---VPCF-- 249
Query: 813 IVYNEWLPILIGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARR 872
L GD R ++Q+ LA + T+ LR HN +A +L + NP W E +YQEAR+
Sbjct: 250 ---------LAGDFRASEQILLATAHTLLLREHNRLARELKKLNPQWDG--EKLYQEARK 298
Query: 873 LVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGE 932
++ Q I + ++LPI++G K + P GY DP + S + F
Sbjct: 299 ILGAFVQIITFRDYLPIVLGSEMQKWI---PPYQGYNNSVDPRI--SNVFTF-------- 345
Query: 933 SYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGLHSLIPGTIKLVNERRV---TN 989
AFR H +P T+ ++E
Sbjct: 346 ----------------------------------AFRFGHMEVPSTVSRLDENYQPWGPE 371
Query: 990 QELPFSSTMQHPGDILEVMDVFDSTLRGLTNQLQQY--QDRFITEQTIDFLF----RVGS 1043
ELP + + I++ + D +RGL + + QD+ +T + + LF ++
Sbjct: 372 AELPLHTLFFNTWRIIKDGGI-DPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHG 430
Query: 1044 LSLEKVIVDLV---GLTLGFFYLWYCG--------------GFLLQVTRLSQVYRGVNDI 1086
L + + G+ + +CG + +L +Y+ ++I
Sbjct: 431 FDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDNI 490
Query: 1087 DYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 1138
D +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 491 DIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 281 GDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTR-LSQVYRGVND 339
G DLAA ++QR RD+G+ Y +R CGLS ++ L + ++ + + L +Y+ ++
Sbjct: 430 GFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDN 489
Query: 340 IDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 392
ID +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 490 IDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 172 QCNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVS-----SYRVSQVDASPL 226
+C+ + YRT+ G CNN R P GA + A R + YEDG++ + R ++ + +
Sbjct: 14 KCDENSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQRKTR-NGFRV 72
Query: 227 PNARVLSRV---FLPDRNISDVH-TRMYLEFSQLVAHDITLNPQ 266
P AR +S +L + + D + + +++++ Q+V HD+ P+
Sbjct: 73 PLAREVSNKIVGYLDEDGVLDQNRSLLFMQWGQIVDHDLDFAPE 116
>pdb|2Z5Z|A Chain A, Crystal Structure Of The Complex Of Buffalo Lactoperoxidase
With Fluoride Ion At 3.5a Resolution
pdb|3FNL|A Chain A, Crystal Structure Of The Complex Of Buffalo Lactoperoxidase
With Salicylhydroxamic Acid At 2.48 A Resolution
Length = 595
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 177/472 (37%), Gaps = 139/472 (29%)
Query: 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNIC 752
QI T F+D S +YGS P A L++LS P G
Sbjct: 179 QINAVTSFLDASLVYGSEPXLASRLQNLSS--------------PLGL------------ 212
Query: 753 YDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQH 812
+AV+Q W Y+ + +P E + AR + CF
Sbjct: 213 -------------MAVNQEAWDHGLAYLPFNNRKPSPC-----EFINTTAR---VPCF-- 249
Query: 813 IVYNEWLPILIGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARR 872
L GD R ++Q+ LA + T+ LR HN +A +L + NP W E +YQEAR+
Sbjct: 250 ---------LAGDFRASEQILLATAHTLLLREHNRLARELKKLNPQWDG--EKLYQEARK 298
Query: 873 LVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGE 932
++ Q I + ++LPI++G K + P GY DP + S + F
Sbjct: 299 ILGAFVQIITFRDYLPIVLGSEMQKWI---PPYQGYNNSVDPRI--SNVFTF-------- 345
Query: 933 SYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGLHSLIPGTIKLVNERRV---TN 989
AFR H +P T+ ++E
Sbjct: 346 ----------------------------------AFRFGHMEVPSTVSRLDENYQPWGPE 371
Query: 990 QELPFSSTMQHPGDILEVMDVFDSTLRGLTNQLQQY--QDRFITEQTIDFLF----RVGS 1043
ELP + + I++ + D +RGL + + QD+ +T + + LF ++
Sbjct: 372 AELPLHTLFFNTWRIIKDGGI-DPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHG 430
Query: 1044 LSLEKVIVDLV---GLTLGFFYLWYCG--------------GFLLQVTRLSQVYRGVNDI 1086
L + + G+ + +CG + +L +Y+ ++I
Sbjct: 431 FDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDNI 490
Query: 1087 DYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 1138
D +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 491 DIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 281 GDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTR-LSQVYRGVND 339
G DLAA ++QR RD+G+ Y +R CGLS ++ L + ++ + + L +Y+ ++
Sbjct: 430 GFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDN 489
Query: 340 IDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFT 392
ID +IGG E ++ P C+ F + + GDR+++E NPG FT
Sbjct: 490 IDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWE-----NPGVFT 537
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 172 QCNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVS-----SYRVSQVDASPL 226
+C+ + YRT+ G CNN R P GA + A R + YEDG++ + R ++ + +
Sbjct: 14 KCDENSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQRKTR-NGFRV 72
Query: 227 PNARVLSRV---FLPDRNISDVH-TRMYLEFSQLVAHDITLNPQ 266
P AR +S +L + + D + + +++++ Q+V HD+ P+
Sbjct: 73 PLAREVSNKIVGYLDEDGVLDQNRSLLFMQWGQIVDHDLDFAPE 116
>pdb|2OYE|P Chain P, Indomethacin-(r)-alpha-ethyl-ethanolamide Bound To
Cyclooxygenase-1
pdb|2OYU|P Chain P, Indomethacin-(S)-Alpha-Ethyl-Ethanolamide Bound To
Cyclooxygenase-1
Length = 600
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNICYDAGDI 758
H +D+ +YG + ++ +LR GKL+ + +NG + P+ + + + +
Sbjct: 226 HGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQM 285
Query: 759 RVNQQL-----DLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
V Q++ L + T+WLR HN V + L ++P+W DE ++Q AR ++IG I
Sbjct: 286 AVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKI 343
Query: 814 VYNEWLPILIG 824
V E++ L G
Sbjct: 344 VIEEYVQQLSG 354
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR HN V + L ++P+W DE ++Q AR ++IG IV E++ L G
Sbjct: 298 LMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKIVIEEYVQQLSG 354
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 284 LAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTRLSQVYRGVNDIDYY 343
+A I+ R L+P+ +YR+ G+ SF +L + E L ++Y ++ +++Y
Sbjct: 447 VAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG--EKEMAAELEELYGDIDALEFY 504
Query: 344 IGGLLES 350
G LLE
Sbjct: 505 PGLLLEK 511
>pdb|1CQE|A Chain A, Prostaglandin H2 Synthase-1 Complex With Flurbiprofen
pdb|1CQE|B Chain B, Prostaglandin H2 Synthase-1 Complex With Flurbiprofen
pdb|1EQG|A Chain A, The 2.6 Angstrom Model Of Ovine Cox-1 Complexed With
Ibuprofen
pdb|1EQG|B Chain B, The 2.6 Angstrom Model Of Ovine Cox-1 Complexed With
Ibuprofen
pdb|1EQH|A Chain A, The 2.7 Angstrom Model Of Ovine Cox-1 Complexed With
Flurbiprofen
pdb|1EQH|B Chain B, The 2.7 Angstrom Model Of Ovine Cox-1 Complexed With
Flurbiprofen
Length = 580
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNICYDAGDI 758
H +D+ +YG + ++ +LR GKL+ + +NG + P+ + + + +
Sbjct: 206 HGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQM 265
Query: 759 RVNQQL-----DLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
V Q++ L + T+WLR HN V + L ++P+W DE ++Q AR ++IG I
Sbjct: 266 AVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKI 323
Query: 814 VYNEWLPILIG 824
V E++ L G
Sbjct: 324 VIEEYVQQLSG 334
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR HN V + L ++P+W DE ++Q AR ++IG IV E++ L G
Sbjct: 278 LMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKIVIEEYVQQLSG 334
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 284 LAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTRLSQVYRGVNDIDYY 343
+A I+ R L+P+ +YR+ G+ SF +L + E L ++Y ++ +++Y
Sbjct: 427 VAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG--EKEMAAELEELYGDIDALEFY 484
Query: 344 IGGLLES 350
G LLE
Sbjct: 485 PGLLLEK 491
>pdb|1PTH|A Chain A, The Structural Basis Of Aspirin Activity Inferred From The
Crystal Structure Of Inactivated Prostaglandin H2
Synthase
pdb|1PTH|B Chain B, The Structural Basis Of Aspirin Activity Inferred From The
Crystal Structure Of Inactivated Prostaglandin H2
Synthase
Length = 576
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNICYDAGDI 758
H +D+ +YG + ++ +LR GKL+ + +NG + P+ + + + +
Sbjct: 202 HGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQM 261
Query: 759 RVNQQL-----DLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
V Q++ L + T+WLR HN V + L ++P+W DE ++Q AR ++IG I
Sbjct: 262 AVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKI 319
Query: 814 VYNEWLPILIG 824
V E++ L G
Sbjct: 320 VIEEYVQQLSG 330
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR HN V + L ++P+W DE ++Q AR ++IG IV E++ L G
Sbjct: 274 LMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKIVIEEYVQQLSG 330
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 284 LAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTRLSQVYRGVNDIDYY 343
+A I+ R L+P+ +YR+ G+ SF +L + E L ++Y ++ +++Y
Sbjct: 423 VAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG--EKEMAAELEELYGDIDALEFY 480
Query: 344 IGGLLES 350
G LLE
Sbjct: 481 PGLLLEK 487
>pdb|1PGE|A Chain A, Prostaglandin H2 Synthase-1 Complexed With
P-(2'-Iodo-5'-Thenoyl) Hydrotropic Acid (Iodosuprofen)
pdb|1PGE|B Chain B, Prostaglandin H2 Synthase-1 Complexed With
P-(2'-Iodo-5'-Thenoyl) Hydrotropic Acid (Iodosuprofen)
pdb|1PGF|A Chain A, Prostaglandin H2 Synthase-1 Complexed With
1-(4-Iodobenzoyl)-5- Methoxy-2-Methylindole-3-Acetic
Acid (Iodoindomethacin), Cis Model
pdb|1PGF|B Chain B, Prostaglandin H2 Synthase-1 Complexed With
1-(4-Iodobenzoyl)-5- Methoxy-2-Methylindole-3-Acetic
Acid (Iodoindomethacin), Cis Model
pdb|1PGG|A Chain A, Prostaglandin H2 Synthase-1 Complexed With
1-(4-Iodobenzoyl)-5- Methoxy-2-Methylindole-3-Acetic
Acid (Iodoindomethacin), Trans Model
pdb|1PGG|B Chain B, Prostaglandin H2 Synthase-1 Complexed With
1-(4-Iodobenzoyl)-5- Methoxy-2-Methylindole-3-Acetic
Acid (Iodoindomethacin), Trans Model
pdb|1FE2|A Chain A, Crystal Structure Of Dihomo-Gamma-Linoleic Acid Bound In
The Cyclooxygenase Channel Of Prostaglandin Endoperoxide
H Synthase-1.
pdb|1IGZ|A Chain A, Crystal Structure Of Linoleic Acid Bound In The
Cyclooxygenase Channel Of Prostaglandin Endoperoxide H
Synthase-1.
pdb|1IGX|A Chain A, Crystal Structure Of Eicosapentanoic Acid Bound In The
Cyclooxygenase Channel Of Prostaglandin Endoperoxide H
Synthase-1
Length = 576
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNICYDAGDI 758
H +D+ +YG + ++ +LR GKL+ + +NG + P+ + + + +
Sbjct: 202 HGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQM 261
Query: 759 RVNQQL-----DLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
V Q++ L + T+WLR HN V + L ++P+W DE ++Q AR ++IG I
Sbjct: 262 AVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKI 319
Query: 814 VYNEWLPILIG 824
V E++ L G
Sbjct: 320 VIEEYVQQLSG 330
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR HN V + L ++P+W DE ++Q AR ++IG IV E++ L G
Sbjct: 274 LMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKIVIEEYVQQLSG 330
Score = 35.0 bits (79), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 284 LAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTRLSQVYRGVNDIDYY 343
+A I+ R L+P+ +YR+ G+ SF +L + E L ++Y ++ +++Y
Sbjct: 423 VAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG--EKEMAAELEELYGDIDALEFY 480
Query: 344 IGGLLES 350
G LLE
Sbjct: 481 PGLLLEK 487
>pdb|3N8W|B Chain B, Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1
Heterodimer Mutant In Complex With Flurbiprofen
Length = 553
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNICYDAGDI 758
H +D+ +YG + ++ +LR GKL+ + +NG + P+ + + + +
Sbjct: 195 HGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQM 254
Query: 759 RVNQQL-----DLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
V Q++ L + T+WLR HN V + L ++P+W DE ++Q AR ++IG I
Sbjct: 255 AVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKI 312
Query: 814 VYNEWLPILIG 824
V E++ L G
Sbjct: 313 VIEEYVQQLSG 323
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR HN V + L ++P+W DE ++Q AR ++IG IV E++ L G
Sbjct: 267 LMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKIVIEEYVQQLSG 323
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 284 LAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTRLSQVYRGVNDIDYY 343
+A I+ R L+P+ +YR+ G+ SF +L + E L ++Y ++ +++Y
Sbjct: 416 VAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG--EKEMAAELEELYGDIDALEFY 473
Query: 344 IGGLLES 350
G LLE
Sbjct: 474 PGLLLEK 480
>pdb|3N8Y|B Chain B, Structure Of Aspirin Acetylated Cyclooxygenase-1 In
Complex With Diclofenac
Length = 553
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNICYDAGDI 758
H +D+ +YG + ++ +LR GKL+ + +NG + P+ + + + +
Sbjct: 195 HGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQM 254
Query: 759 RVNQQL-----DLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
V Q++ L + T+WLR HN V + L ++P+W DE ++Q AR ++IG I
Sbjct: 255 AVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKI 312
Query: 814 VYNEWLPILIG 824
V E++ L G
Sbjct: 313 VIEEYVQQLSG 323
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR HN V + L ++P+W DE ++Q AR ++IG IV E++ L G
Sbjct: 267 LMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKIVIEEYVQQLSG 323
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 284 LAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTRLSQVYRGVNDIDYY 343
+A I+ R L+P+ +YR+ G+ SF +L + E L ++Y ++ +++Y
Sbjct: 416 VAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG--EKEMAAELEELYGDIDALEFY 473
Query: 344 IGGLLES 350
G LLE
Sbjct: 474 PGLLLEK 480
>pdb|1DIY|A Chain A, Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Active Site Of Pghs-1
pdb|1Q4G|A Chain A, 2.0 Angstrom Crystal Structure Of Ovine Prostaglandin H2
Synthase-1, In Complex With
Alpha-Methyl-4-Biphenylacetic Acid
pdb|1Q4G|B Chain B, 2.0 Angstrom Crystal Structure Of Ovine Prostaglandin H2
Synthase-1, In Complex With
Alpha-Methyl-4-Biphenylacetic Acid
pdb|2AYL|A Chain A, 2.0 Angstrom Crystal Structure Of Manganese Protoporphyrin
Ix- Reconstituted Ovine Prostaglandin H2 Synthase-1
Complexed With Flurbiprofen
pdb|2AYL|B Chain B, 2.0 Angstrom Crystal Structure Of Manganese Protoporphyrin
Ix- Reconstituted Ovine Prostaglandin H2 Synthase-1
Complexed With Flurbiprofen
pdb|3KK6|A Chain A, Crystal Structure Of Cyclooxygenase-1 In Complex With
Celecoxib
pdb|3KK6|B Chain B, Crystal Structure Of Cyclooxygenase-1 In Complex With
Celecoxib
pdb|3N8V|A Chain A, Crystal Structure Of Unoccupied Cyclooxygenase-1
pdb|3N8V|B Chain B, Crystal Structure Of Unoccupied Cyclooxygenase-1
pdb|3N8W|A Chain A, Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1
Heterodimer Mutant In Complex With Flurbiprofen
pdb|3N8X|A Chain A, Crystal Structure Of Cyclooxygenase-1 In Complex With
Nimesulide
pdb|3N8X|B Chain B, Crystal Structure Of Cyclooxygenase-1 In Complex With
Nimesulide
pdb|3N8Y|A Chain A, Structure Of Aspirin Acetylated Cyclooxygenase-1 In
Complex With Diclofenac
pdb|3N8Z|A Chain A, Crystal Structure Of Cyclooxygenase-1 In Complex With
Flurbiprofen
pdb|3N8Z|B Chain B, Crystal Structure Of Cyclooxygenase-1 In Complex With
Flurbiprofen
Length = 553
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNICYDAGDI 758
H +D+ +YG + ++ +LR GKL+ + +NG + P+ + + + +
Sbjct: 195 HGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQM 254
Query: 759 RVNQQL-----DLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
V Q++ L + T+WLR HN V + L ++P+W DE ++Q AR ++IG I
Sbjct: 255 AVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKI 312
Query: 814 VYNEWLPILIG 824
V E++ L G
Sbjct: 313 VIEEYVQQLSG 323
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR HN V + L ++P+W DE ++Q AR ++IG IV E++ L G
Sbjct: 267 LMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKIVIEEYVQQLSG 323
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 284 LAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTRLSQVYRGVNDIDYY 343
+A I+ R L+P+ +YR+ G+ SF +L + E L ++Y ++ +++Y
Sbjct: 416 VAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG--EKEMAAELEELYGDIDALEFY 473
Query: 344 IGGLLES 350
G LLE
Sbjct: 474 PGLLLEK 480
>pdb|1HT5|A Chain A, The 2.75 Angstrom Resolution Model Of Ovine Cox-1
Complexed With Methyl Ester Flurbiprofen
pdb|1HT5|B Chain B, The 2.75 Angstrom Resolution Model Of Ovine Cox-1
Complexed With Methyl Ester Flurbiprofen
pdb|1HT8|A Chain A, The 2.7 Angstrom Resolution Model Of Ovine Cox-1 Complexed
With Alclofenac
pdb|1HT8|B Chain B, The 2.7 Angstrom Resolution Model Of Ovine Cox-1 Complexed
With Alclofenac
Length = 551
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNICYDAGDI 758
H +D+ +YG + ++ +LR GKL+ + +NG + P+ + + + +
Sbjct: 194 HGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQM 253
Query: 759 RVNQQL-----DLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
V Q++ L + T+WLR HN V + L ++P+W DE ++Q AR ++IG I
Sbjct: 254 AVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKI 311
Query: 814 VYNEWLPILIG 824
V E++ L G
Sbjct: 312 VIEEYVQQLSG 322
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR HN V + L ++P+W DE ++Q AR ++IG IV E++ L G
Sbjct: 266 LMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKIVIEEYVQQLSG 322
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 284 LAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTRLSQVYRGVNDIDYY 343
+A I+ R L+P+ +YR+ G+ SF +L + E L ++Y ++ +++Y
Sbjct: 415 VAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG--EKEMAAELEELYGDIDALEFY 472
Query: 344 IGGLLES 350
G LLE
Sbjct: 473 PGLLLEK 479
>pdb|1EBV|A Chain A, Ovine Pghs-1 Complexed With Salicyl Hydroxamic Acid
Length = 551
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNICYDAGDI 758
H +D+ +YG + ++ +LR GKL+ + +NG + P+ + + + +
Sbjct: 194 HGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQM 253
Query: 759 RVNQQL-----DLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
V Q++ L + T+WLR HN V + L ++P+W DE ++Q AR ++IG I
Sbjct: 254 AVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKI 311
Query: 814 VYNEWLPILIG 824
V E++ L G
Sbjct: 312 VIEEYVQQLSG 322
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR HN V + L ++P+W DE ++Q AR ++IG IV E++ L G
Sbjct: 266 LMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKIVIEEYVQQLSG 322
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 284 LAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTRLSQVYRGVNDIDYY 343
+A I+ R L+P+ +YR+ G+ SF +L + E L ++Y ++ +++Y
Sbjct: 415 VAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG--EKEMAAELEELYGDIDALEFY 472
Query: 344 IGGLLES 350
G LLE
Sbjct: 473 PGLLLEK 479
>pdb|3RR3|A Chain A, Structure Of (R)-Flurbiprofen Bound To Mcox-2
pdb|3RR3|B Chain B, Structure Of (R)-Flurbiprofen Bound To Mcox-2
pdb|3RR3|C Chain C, Structure Of (R)-Flurbiprofen Bound To Mcox-2
pdb|3RR3|D Chain D, Structure Of (R)-Flurbiprofen Bound To Mcox-2
Length = 560
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCV-----NASSNICY 753
H +D++ +YG D+ +LR GKL+ + + G + PT + + N+ +
Sbjct: 195 HGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQF 254
Query: 754 DAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
G L + T+WLR HN V + L Q++P W DE ++Q +R ++IG I
Sbjct: 255 AVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKI 312
Query: 814 VYNEWLPILIG 824
V +++ L G
Sbjct: 313 VIEDYVQHLSG 323
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGE 893
L + T+WLR HN V + L Q++P W DE ++Q +R ++IG IV +++ L G
Sbjct: 267 LMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKIVIEDYVQHLSGY 324
Query: 894 SY 895
+
Sbjct: 325 HF 326
>pdb|1U67|A Chain A, Crystal Structure Of Arachidonic Acid Bound To A Mutant Of
Prostagladin H Synthase-1 That Forms Predominantly
11-hpete
Length = 600
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNICYDAGDI 758
H +D+ +YG + ++ +LR GKL+ + +NG + P+ + + + +
Sbjct: 226 HGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQM 285
Query: 759 RVNQQL-----DLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
V Q++ L + T+WLR HN V + L ++P+W DE ++Q AR ++IG I
Sbjct: 286 AVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIGETIKI 343
Query: 814 VYNEWLPILIG 824
V E+ L G
Sbjct: 344 VIEEYAQQLSG 354
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 19/85 (22%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGE 893
L + T+WLR HN V + L ++P+W DE ++Q AR ++IG E + I+I E
Sbjct: 298 LMLYATIWLREHNRVCDLLKAEHPTWG--DEQLFQTARLILIG--------ETIKIVI-E 346
Query: 894 SYTKDVGLSPTSSGYF--QGYDPEV 916
Y + + SGYF +DPE+
Sbjct: 347 EYAQQL------SGYFLQLKFDPEL 365
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 284 LAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTRLSQVYRGVNDIDYY 343
+A I+ R L+P+ +YR+ G+ SF +L + E L ++Y ++ +++Y
Sbjct: 447 VAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG--EKEMAAELEELYGDIDALEFY 504
Query: 344 IGGLLES 350
G LLE
Sbjct: 505 PGLLLEK 511
>pdb|3KRK|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Channel Of L531f Murine Cox-2
pdb|3KRK|B Chain B, X-Ray Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Channel Of L531f Murine Cox-2
Length = 591
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCV-----NASSNICY 753
H +D++ +YG D+ +LR GKL+ + + G + PT + + N+ +
Sbjct: 199 HGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQF 258
Query: 754 DAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
G L + T+WLR HN V + L Q++P W DE ++Q +R ++IG I
Sbjct: 259 AVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKI 316
Query: 814 VYNEWLPILIG 824
V +++ L G
Sbjct: 317 VIEDYVQHLSG 327
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR HN V + L Q++P W DE ++Q +R ++IG IV +++ L G
Sbjct: 271 LMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKIVIEDYVQHLSG 327
>pdb|3HS5|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS5|B Chain B, X-Ray Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS6|A Chain A, X-Ray Crystal Structure Of Eicosapentaenoic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS6|B Chain B, X-Ray Crystal Structure Of Eicosapentaenoic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS7|A Chain A, X-Ray Crystal Structure Of Docosahexaenoic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS7|B Chain B, X-Ray Crystal Structure Of Docosahexaenoic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
Length = 591
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCV-----NASSNICY 753
H +D++ +YG D+ +LR GKL+ + + G + PT + + N+ +
Sbjct: 199 HGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQF 258
Query: 754 DAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
G L + T+WLR HN V + L Q++P W DE ++Q +R ++IG I
Sbjct: 259 AVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKI 316
Query: 814 VYNEWLPILIG 824
V +++ L G
Sbjct: 317 VIEDYVQHLSG 327
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR HN V + L Q++P W DE ++Q +R ++IG IV +++ L G
Sbjct: 271 LMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKIVIEDYVQHLSG 327
>pdb|3MDL|A Chain A, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound
To The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3MDL|B Chain B, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound
To The Cyclooxygenase Channel Of Cyclooxygenase-2
Length = 587
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCV-----NASSNICY 753
H +D++ +YG D+ +LR GKL+ + + G + PT + + N+ +
Sbjct: 200 HGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQF 259
Query: 754 DAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
G L + T+WLR HN V + L Q++P W DE ++Q +R ++IG I
Sbjct: 260 AVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKI 317
Query: 814 VYNEWLPILIG 824
V +++ L G
Sbjct: 318 VIEDYVQHLSG 328
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGE 893
L + T+WLR HN V + L Q++P W DE ++Q +R ++IG IV +++ L G
Sbjct: 272 LMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKIVIEDYVQHLSGY 329
Query: 894 SY 895
+
Sbjct: 330 HF 331
>pdb|3TZI|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Channel Of G533v Murine Cox-2
pdb|3TZI|B Chain B, X-Ray Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Channel Of G533v Murine Cox-2
Length = 593
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCV-----NASSNICY 753
H +D++ +YG D+ +LR GKL+ + + G + PT + + N+ +
Sbjct: 201 HGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQF 260
Query: 754 DAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
G L + T+WLR HN V + L Q++P W DE ++Q +R ++IG I
Sbjct: 261 AVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKI 318
Query: 814 VYNEWLPILIG 824
V +++ L G
Sbjct: 319 VIEDYVQHLSG 329
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR HN V + L Q++P W DE ++Q +R ++IG IV +++ L G
Sbjct: 273 LMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKIVIEDYVQHLSG 329
>pdb|3OLT|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Channel Of R513h Murine Cox-2
pdb|3OLT|B Chain B, X-Ray Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Channel Of R513h Murine Cox-2
pdb|3OLU|A Chain A, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound
To The Cyclooxygenase Channel Of R513h Murine Cox-2
pdb|3OLU|B Chain B, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound
To The Cyclooxygenase Channel Of R513h Murine Cox-2
Length = 592
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCV-----NASSNICY 753
H +D++ +YG D+ +LR GKL+ + + G + PT + + N+ +
Sbjct: 200 HGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQF 259
Query: 754 DAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
G L + T+WLR HN V + L Q++P W DE ++Q +R ++IG I
Sbjct: 260 AVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKI 317
Query: 814 VYNEWLPILIG 824
V +++ L G
Sbjct: 318 VIEDYVQHLSG 328
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR HN V + L Q++P W DE ++Q +R ++IG IV +++ L G
Sbjct: 272 LMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKIVIEDYVQHLSG 328
>pdb|3NT1|A Chain A, High Resolution Structure Of Naproxen:cox-2 Complex.
pdb|3NT1|B Chain B, High Resolution Structure Of Naproxen:cox-2 Complex.
pdb|3NTB|A Chain A, Structure Of 6-Methylthio Naproxen Analog Bound To Mcox-2.
pdb|3NTB|B Chain B, Structure Of 6-Methylthio Naproxen Analog Bound To Mcox-2.
pdb|3NTB|C Chain C, Structure Of 6-Methylthio Naproxen Analog Bound To Mcox-2.
pdb|3NTB|D Chain D, Structure Of 6-Methylthio Naproxen Analog Bound To Mcox-2.
pdb|3LN0|A Chain A, Structure Of Compound 5c-S Bound At The Active Site Of
Cox-2
pdb|3LN0|B Chain B, Structure Of Compound 5c-S Bound At The Active Site Of
Cox-2
pdb|3LN0|C Chain C, Structure Of Compound 5c-S Bound At The Active Site Of
Cox-2
pdb|3LN0|D Chain D, Structure Of Compound 5c-S Bound At The Active Site Of
Cox-2
pdb|3LN1|A Chain A, Structure Of Celecoxib Bound At The Cox-2 Active Site
pdb|3LN1|B Chain B, Structure Of Celecoxib Bound At The Cox-2 Active Site
pdb|3LN1|C Chain C, Structure Of Celecoxib Bound At The Cox-2 Active Site
pdb|3LN1|D Chain D, Structure Of Celecoxib Bound At The Cox-2 Active Site
pdb|3MQE|A Chain A, Structure Of Sc-75416 Bound At The Cox-2 Active Site
pdb|3MQE|B Chain B, Structure Of Sc-75416 Bound At The Cox-2 Active Site
pdb|3MQE|C Chain C, Structure Of Sc-75416 Bound At The Cox-2 Active Site
pdb|3MQE|D Chain D, Structure Of Sc-75416 Bound At The Cox-2 Active Site
pdb|3Q7D|A Chain A, Structure Of (R)-Naproxen Bound To Mcox-2.
pdb|3Q7D|B Chain B, Structure Of (R)-Naproxen Bound To Mcox-2
Length = 587
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCV-----NASSNICY 753
H +D++ +YG D+ +LR GKL+ + + G + PT + + N+ +
Sbjct: 195 HGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQF 254
Query: 754 DAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
G L + T+WLR HN V + L Q++P W DE ++Q +R ++IG I
Sbjct: 255 AVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKI 312
Query: 814 VYNEWLPILIG 824
V +++ L G
Sbjct: 313 VIEDYVQHLSG 323
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR HN V + L Q++P W DE ++Q +R ++IG IV +++ L G
Sbjct: 267 LMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKIVIEDYVQHLSG 323
>pdb|1DDX|A Chain A, Crystal Structure Of A Mixture Of Arachidonic Acid And
Prostaglandin Bound To The Cyclooxygenase Active Site Of
Cox-2: Prostaglandin Structure
pdb|1DDX|B Chain B, Crystal Structure Of A Mixture Of Arachidonic Acid And
Prostaglandin Bound To The Cyclooxygenase Active Site Of
Cox-2: Prostaglandin Structure
pdb|1DDX|C Chain C, Crystal Structure Of A Mixture Of Arachidonic Acid And
Prostaglandin Bound To The Cyclooxygenase Active Site Of
Cox-2: Prostaglandin Structure
pdb|1DDX|D Chain D, Crystal Structure Of A Mixture Of Arachidonic Acid And
Prostaglandin Bound To The Cyclooxygenase Active Site Of
Cox-2: Prostaglandin Structure
pdb|3NTG|A Chain A, Crystal Structure Of Cox-2 With Selective Compound 23d-(R)
pdb|3NTG|B Chain B, Crystal Structure Of Cox-2 With Selective Compound 23d-(R)
pdb|3NTG|C Chain C, Crystal Structure Of Cox-2 With Selective Compound 23d-(R)
pdb|3NTG|D Chain D, Crystal Structure Of Cox-2 With Selective Compound 23d-(R)
Length = 552
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCV-----NASSNICY 753
H +D++ +YG D+ +LR GKL+ + + G + PT + + N+ +
Sbjct: 195 HGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQF 254
Query: 754 DAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
G L + T+WLR HN V + L Q++P W DE ++Q +R ++IG I
Sbjct: 255 AVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKI 312
Query: 814 VYNEWLPILIG 824
V +++ L G
Sbjct: 313 VIEDYVQHLSG 323
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGE 893
L + T+WLR HN V + L Q++P W DE ++Q +R ++IG IV +++ L G
Sbjct: 267 LMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKIVIEDYVQHLSGY 324
Query: 894 SY 895
+
Sbjct: 325 HF 326
>pdb|3QH0|A Chain A, X-Ray Crystal Structure Of Palmitic Acid Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3QH0|B Chain B, X-Ray Crystal Structure Of Palmitic Acid Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3QMO|A Chain A, X-Ray Crystal Structure Of Ns-398 Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3QMO|B Chain B, X-Ray Crystal Structure Of Ns-398 Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|4E1G|A Chain A, X-Ray Crystal Structure Of Alpha-Linolenic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|4E1G|B Chain B, X-Ray Crystal Structure Of Alpha-Linolenic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
Length = 610
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCV-----NASSNICY 753
H +D++ +YG D+ +LR GKL+ + + G + PT + + N+ +
Sbjct: 218 HGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQF 277
Query: 754 DAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
G L + T+WLR HN V + L Q++P W DE ++Q +R ++IG I
Sbjct: 278 AVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKI 335
Query: 814 VYNEWLPILIG 824
V +++ L G
Sbjct: 336 VIEDYVQHLSG 346
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGE 893
L + T+WLR HN V + L Q++P W DE ++Q +R ++IG IV +++ L G
Sbjct: 290 LMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKIVIEDYVQHLSGY 347
Query: 894 SY 895
+
Sbjct: 348 HF 349
>pdb|1PXX|A Chain A, Crystal Structure Of Diclofenac Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|1PXX|B Chain B, Crystal Structure Of Diclofenac Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|1PXX|C Chain C, Crystal Structure Of Diclofenac Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|1PXX|D Chain D, Crystal Structure Of Diclofenac Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|4FM5|A Chain A, X-Ray Structure Of Des-Methylflurbiprofen Bound To Murine
Cox-2
pdb|4FM5|B Chain B, X-Ray Structure Of Des-Methylflurbiprofen Bound To Murine
Cox-2
pdb|4FM5|C Chain C, X-Ray Structure Of Des-Methylflurbiprofen Bound To Murine
Cox-2
pdb|4FM5|D Chain D, X-Ray Structure Of Des-Methylflurbiprofen Bound To Murine
Cox-2
Length = 604
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCV-----NASSNICY 753
H +D++ +YG D+ +LR GKL+ + + G + PT + + N+ +
Sbjct: 212 HGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQF 271
Query: 754 DAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
G L + T+WLR HN V + L Q++P W DE ++Q +R ++IG I
Sbjct: 272 AVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKI 329
Query: 814 VYNEWLPILIG 824
V +++ L G
Sbjct: 330 VIEDYVQHLSG 340
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGE 893
L + T+WLR HN V + L Q++P W DE ++Q +R ++IG IV +++ L G
Sbjct: 284 LMMYATIWLREHNRVCDILKQEHPEWG--DEQLFQTSRLILIGETIKIVIEDYVQHLSGY 341
Query: 894 SY 895
+
Sbjct: 342 HF 343
>pdb|1PRH|A Chain A, The X-Ray Crystal Structure Of The Membrane Protein
Prostaglandin H2 Synthase-1
pdb|1PRH|B Chain B, The X-Ray Crystal Structure Of The Membrane Protein
Prostaglandin H2 Synthase-1
Length = 554
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCVNASSNICYDAGDI 758
H +D+ +YG + ++ +LR GKL+ + +NG + P+ + + + +
Sbjct: 194 HGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQM 253
Query: 759 RVNQQL-----DLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
V Q++ L + T+WLR H V + L ++P+W DE ++Q A+ ++IG I
Sbjct: 254 AVGQEVFGLLPGLMLYATIWLREHQRVCDLLKAEHPTWG--DEQLFQTAKLILIGETIKI 311
Query: 814 VYNEWLPILIG 824
V E++ L G
Sbjct: 312 VIEEYVQQLSG 322
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR H V + L ++P+W DE ++Q A+ ++IG IV E++ L G
Sbjct: 266 LMLYATIWLREHQRVCDLLKAEHPTWG--DEQLFQTAKLILIGETIKIVIEEYVQQLSG 322
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 284 LAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTRLSQVYRGVNDIDYY 343
+A I+ R L+P+ +YR+ G+ SF +L + E L ++Y ++ +++Y
Sbjct: 415 VAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG--EKEMAAELEELYGDIDALEFY 472
Query: 344 IGGLLES 350
G LLE
Sbjct: 473 PGLLLEK 479
>pdb|1CVU|A Chain A, Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|1CVU|B Chain B, Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Active Site Of Cox-2
Length = 552
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCV-----NASSNICY 753
H +D++ +YG D+ +LR GKL+ + + G + PT + + N+ +
Sbjct: 195 HGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQF 254
Query: 754 DAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
G L + T+WLR H V + L Q++P W DE ++Q ++ ++IG I
Sbjct: 255 AVGQEVFGLVPGLMMYATIWLREHQRVCDILKQEHPEWG--DEQLFQTSKLILIGETIKI 312
Query: 814 VYNEWLPILIG 824
V +++ L G
Sbjct: 313 VIEDYVQHLSG 323
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGE 893
L + T+WLR H V + L Q++P W DE ++Q ++ ++IG IV +++ L G
Sbjct: 267 LMMYATIWLREHQRVCDILKQEHPEWG--DEQLFQTSKLILIGETIKIVIEDYVQHLSGY 324
Query: 894 SY 895
+
Sbjct: 325 HF 326
>pdb|3PGH|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Flurbiprofen
pdb|3PGH|B Chain B, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Flurbiprofen
pdb|3PGH|C Chain C, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Flurbiprofen
pdb|3PGH|D Chain D, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Flurbiprofen
pdb|4COX|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Indomethacin
pdb|4COX|B Chain B, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Indomethacin
pdb|4COX|C Chain C, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Indomethacin
pdb|4COX|D Chain D, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Indomethacin
pdb|5COX|A Chain A, Uninhibited Mouse Cyclooxygenase-2 (Prostaglandin
Synthase-2)
pdb|5COX|B Chain B, Uninhibited Mouse Cyclooxygenase-2 (Prostaglandin
Synthase-2)
pdb|5COX|C Chain C, Uninhibited Mouse Cyclooxygenase-2 (Prostaglandin
Synthase-2)
pdb|5COX|D Chain D, Uninhibited Mouse Cyclooxygenase-2 (Prostaglandin
Synthase-2)
pdb|6COX|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558 In I222 Space Group
pdb|6COX|B Chain B, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558 In I222 Space Group
pdb|1CX2|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558
pdb|1CX2|B Chain B, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558
pdb|1CX2|C Chain C, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558
pdb|1CX2|D Chain D, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558
Length = 587
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 7/131 (5%)
Query: 699 HFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCV-----NASSNICY 753
H +D++ +YG D+ +LR GKL+ + + G + PT + + N+ +
Sbjct: 195 HGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQF 254
Query: 754 DAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHI 813
G L + T+WLR H V + L Q++P W DE ++Q ++ ++IG I
Sbjct: 255 AVGQEVFGLVPGLMMYATIWLREHQRVCDILKQEHPEWG--DEQLFQTSKLILIGETIKI 312
Query: 814 VYNEWLPILIG 824
V +++ L G
Sbjct: 313 VIEDYVQHLSG 323
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 834 LAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIG 892
L + T+WLR H V + L Q++P W DE ++Q ++ ++IG IV +++ L G
Sbjct: 267 LMMYATIWLREHQRVCDILKQEHPEWG--DEQLFQTSKLILIGETIKIVIEDYVQHLSG 323
>pdb|1CXP|A Chain A, Cryogenic Crystal Structure Of Human Myeloperoxidase
Isoform C
pdb|1CXP|B Chain B, Cryogenic Crystal Structure Of Human Myeloperoxidase
Isoform C
pdb|1D2V|A Chain A, Crystal Structure Of Bromide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D2V|B Chain B, Crystal Structure Of Bromide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D7W|A Chain A, Crystal Structure Of Human Myeloperoxidase Isoform C
Complexed With Cyanide And Bromide At Ph 4.0
pdb|1D7W|B Chain B, Crystal Structure Of Human Myeloperoxidase Isoform C
Complexed With Cyanide And Bromide At Ph 4.0
pdb|1D5L|A Chain A, Crystal Structure Of Cyanide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D5L|B Chain B, Crystal Structure Of Cyanide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1DNU|A Chain A, Structural Analyses Of Human Myeloperoxidase-Thiocyanate
Complex
pdb|1DNU|B Chain B, Structural Analyses Of Human Myeloperoxidase-Thiocyanate
Complex
pdb|1DNW|A Chain A, Human Myeloperoxidase-Cyanide-Thiocyanate Complex
pdb|1DNW|B Chain B, Human Myeloperoxidase-Cyanide-Thiocyanate Complex
pdb|4DL1|A Chain A, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|B Chain B, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|E Chain E, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|F Chain F, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|I Chain I, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|J Chain J, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|M Chain M, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|N Chain N, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
Length = 104
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 173 CNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVS-SYRVS---QVDASPLPN 228
C + KYRT+ G CNN R P GA + A VR + YEDG S Y + + + P+
Sbjct: 1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVAL 60
Query: 229 ARVLSR--VFLPDRNISDVHTR--MYLEFSQLVAHDITLNPQES 268
AR +S V P ++ R M++++ QL+ HD+ P+ +
Sbjct: 61 ARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 104
>pdb|3F9P|A Chain A, Crystal Structure Of Myeloperoxidase From Human Leukocytes
pdb|3F9P|B Chain B, Crystal Structure Of Myeloperoxidase From Human Leukocytes
pdb|3ZS1|A Chain A, Human Myeloperoxidase Inactivated By Tx5
pdb|3ZS1|B Chain B, Human Myeloperoxidase Inactivated By Tx5
Length = 114
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 173 CNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVS-SYRVS---QVDASPLPN 228
C + KYRT+ G CNN R P GA + A VR + YEDG S Y + + + P+
Sbjct: 3 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVAL 62
Query: 229 ARVLSR--VFLPDRNISDVHTR--MYLEFSQLVAHDITLNPQES 268
AR +S V P ++ R M++++ QL+ HD+ P+ +
Sbjct: 63 ARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 106
>pdb|1MYP|A Chain A, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3
Angstroms Resolution
pdb|1MYP|B Chain B, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3
Angstroms Resolution
pdb|1MHL|A Chain A, Crystal Structure Of Human Myeloperoxidase Isoform C
Crystallized In Space Group P2(1) At Ph 5.5 And 20 Deg C
pdb|1MHL|B Chain B, Crystal Structure Of Human Myeloperoxidase Isoform C
Crystallized In Space Group P2(1) At Ph 5.5 And 20 Deg C
pdb|3ZS0|A Chain A, Human Myeloperoxidase Inactivated By Tx2
pdb|3ZS0|B Chain B, Human Myeloperoxidase Inactivated By Tx2
Length = 108
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 173 CNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVS-SYRVS---QVDASPLPN 228
C + KYRT+ G CNN R P GA + A VR + YEDG S Y + + + P+
Sbjct: 3 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVAL 62
Query: 229 ARVLSR--VFLPDRNISDVHTR--MYLEFSQLVAHDITLNPQES 268
AR +S V P ++ R M++++ QL+ HD+ P+ +
Sbjct: 63 ARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA 106
>pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group
pdb|3Q6M|B Chain B, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group
pdb|3Q6M|C Chain C, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group
pdb|3Q6N|A Chain A, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|B Chain B, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|C Chain C, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|D Chain D, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|E Chain E, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|F Chain F, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
Length = 448
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 27/41 (65%)
Query: 1 IVETLRQXXXXXXXXXXXXXLVNLLFETSLLSSGFTLEDPQ 41
I+ETLRQ LV LL+ET+LLSSGF+LEDPQ
Sbjct: 352 IIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQ 392
>pdb|4HHR|A Chain A, Crystal Structure Of Fatty Acid Alpha-dioxygenase
(arabidopsis Thaliana)
pdb|4HHS|A Chain A, Crystal Structure Of Fatty Acid Alpha-dioxygenase
(arabidopsis Thaliana)
Length = 652
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 283 DLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTRLSQVYRG-VNDID 341
DLAA +I R R+ + Y ++R + + + DL + D E + L VY G V ++D
Sbjct: 490 DLAALEIYRDRERSVPRYNEFRRSMFMIPITKWEDLTE--DEEAIEVLDDVYDGDVEELD 547
Query: 342 YYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYF 379
+G + E I+G S + +F R DR+F
Sbjct: 548 LLVGLMAEKKIKGFAISETAFYIFLIMATRRLEADRFF 585
>pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312
Length = 444
Score = 37.0 bits (84), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 1 IVETLRQXXXXXXXXXXXXXLVNLLFETSLLSSGFTLEDP 40
I++ LR+ LV LLF+TSLL+SGF LEDP
Sbjct: 368 IIKELRRRVGADENDKAVKDLVFLLFDTSLLTSGFQLEDP 407
>pdb|1TVF|A Chain A, Crystal Structure Of Penicillin-Binding Protein 4 (Pbp4)
From Staphylococcus Aureus
pdb|1TVF|B Chain B, Crystal Structure Of Penicillin-Binding Protein 4 (Pbp4)
From Staphylococcus Aureus
Length = 369
Score = 37.0 bits (84), Expect = 0.084, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 903 PTSSGYFQGYDPEVNPSTLADFAAGAFRGESY--TKDVGLSPTSSGYFQ-GYDPEVNPST 959
P +S Y Q + +V P A+ A +Y T V +S T +Q D + NP++
Sbjct: 2 PHTSSYAQATNSDVTPVQAANQYGYAGLSAAYEPTSAVNVSQTGQLLYQYNIDTKWNPAS 61
Query: 960 LADFAAGAFRGLHSLIPGTIKLVNERRVTNQE-----LP-FSSTMQHPGDILEVMDVFDS 1013
+ + L ++ G + L + +TN+E LP S+T +PG + + D+
Sbjct: 62 MTKLMT-MYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELSNTKLYPGQVWTIADLLQI 120
Query: 1014 TLRGLTNQLQQYQDRFITEQTIDFL 1038
T+ +N + +++ T DF+
Sbjct: 121 TVSNSSNAAALILAKKVSKNTSDFV 145
>pdb|3HUM|A Chain A, Crystal Structure Of Penicillin Binding Protein 4 From
Staphylococcus Aureus Col In Complex With Cefotaxime
pdb|3HUM|B Chain B, Crystal Structure Of Penicillin Binding Protein 4 From
Staphylococcus Aureus Col In Complex With Cefotaxime
pdb|3HUN|A Chain A, Crystal Structure Of Penicillin Binding Protein 4 From
Staphylococcus Aureus Col In Complex With Ampicillin
pdb|3HUN|B Chain B, Crystal Structure Of Penicillin Binding Protein 4 From
Staphylococcus Aureus Col In Complex With Ampicillin
Length = 453
Score = 33.1 bits (74), Expect = 1.1, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 908 YFQGYDPEVNPSTLADFAAGAFRGESY--TKDVGLSPTSSGYFQ-GYDPEVNPSTLADFA 964
Y Q + +V P A+ A +Y T V +S T +Q D + NP+++
Sbjct: 43 YAQATNSDVTPVQAANQYGYAGLSAAYEPTSAVNVSQTGQLLYQYNIDTKWNPASMTKLM 102
Query: 965 AGAFRGLHSLIPGTIKLVNERRVTNQE-----LP-FSSTMQHPGDILEVMDVFDSTLRGL 1018
+ L ++ G + L + +TN+E LP S+T +PG + + D+ T+
Sbjct: 103 T-MYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELSNTKLYPGQVWTIADLLQITVSNS 161
Query: 1019 TNQLQQYQDRFITEQTIDFL 1038
+N + +++ T DF+
Sbjct: 162 SNAAALILAKKVSKNTSDFV 181
>pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
pdb|2CGE|B Chain B, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
pdb|2CGE|D Chain D, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
Length = 405
Score = 31.6 bits (70), Expect = 3.1, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 21 LVNLLFETSLLSSGFTLEDP 40
L LL+ET+LL+SGF+L++P
Sbjct: 370 LTKLLYETALLTSGFSLDEP 389
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,204,597
Number of Sequences: 62578
Number of extensions: 1553583
Number of successful extensions: 3532
Number of sequences better than 100.0: 119
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3030
Number of HSP's gapped (non-prelim): 332
length of query: 1386
length of database: 14,973,337
effective HSP length: 111
effective length of query: 1275
effective length of database: 8,027,179
effective search space: 10234653225
effective search space used: 10234653225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)