Query psy16067
Match_columns 1386
No_of_seqs 659 out of 2501
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 20:01:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16067.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16067hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q9k_A Lactoperoxidase, LPO; b 100.0 5E-115 2E-119 1063.6 27.5 417 610-1196 135-591 (595)
2 1d2v_C Myeloperoxidase; heme-p 100.0 1.3E-93 4.5E-98 857.0 25.6 422 599-1196 2-464 (466)
3 3nt1_A Prostaglandin-endoperox 100.0 4E-78 1.4E-82 736.4 18.4 332 695-1176 191-554 (587)
4 1q4g_A Prostaglandin G/H synth 100.0 1E-75 3.4E-80 715.2 23.6 333 693-1175 189-553 (553)
5 3peh_A Endoplasmin homolog; st 100.0 1.4E-41 4.9E-46 380.3 8.5 159 1224-1382 83-243 (281)
6 3ied_A Heat shock protein; HSP 100.0 2.5E-39 8.4E-44 355.1 13.9 146 1224-1370 120-272 (272)
7 3nmq_A Heat shock protein HSP 100.0 3E-39 1E-43 355.1 12.6 154 1224-1377 76-229 (239)
8 1qy5_A Endoplasmin; GRP94, NEC 100.0 2.1E-36 7.3E-41 339.1 11.8 158 1224-1382 65-228 (269)
9 3q9k_A Lactoperoxidase, LPO; b 100.0 2.7E-36 9.2E-41 369.5 10.4 151 280-438 429-581 (595)
10 3o0i_A HSP90AA1 protein; HSP90 100.0 2.9E-35 1E-39 326.5 12.7 160 1224-1383 97-256 (256)
11 1d2v_C Myeloperoxidase; heme-p 100.0 1.5E-35 5E-40 355.5 8.1 153 278-438 299-454 (466)
12 3t0h_A Heat shock protein HSP 100.0 1.2E-33 4.2E-38 310.1 13.6 160 1224-1383 69-228 (228)
13 2cg9_A ATP-dependent molecular 100.0 7.5E-34 2.6E-38 350.2 11.4 155 1224-1378 63-218 (677)
14 1yc1_A HSP 86, heat shock prot 100.0 1.2E-31 4.2E-36 300.3 13.4 159 1224-1382 105-263 (264)
15 2gqp_A Endoplasmin; GRP94, HSP 100.0 2.6E-31 8.9E-36 293.6 12.0 150 1224-1374 69-224 (236)
16 2wer_A ATP-dependent molecular 100.0 2E-30 6.7E-35 283.8 13.4 156 1224-1379 63-219 (220)
17 2o1u_A Endoplasmin; GRP94, HSP 100.0 8.9E-31 3E-35 322.9 11.8 148 1224-1372 82-235 (666)
18 3nt1_A Prostaglandin-endoperox 100.0 1.1E-30 3.6E-35 319.5 5.6 232 162-417 90-545 (587)
19 1y4s_A Chaperone protein HTPG; 100.0 2.6E-29 8.9E-34 305.8 8.9 144 1224-1369 64-212 (559)
20 1q4g_A Prostaglandin G/H synth 100.0 2.1E-29 7.2E-34 307.8 6.3 126 280-414 412-542 (553)
21 2ioq_A Chaperone protein HTPG; 99.9 6.4E-29 2.2E-33 305.6 7.9 144 1224-1369 64-212 (624)
22 2ior_A Chaperone protein HTPG; 99.9 3.4E-26 1.2E-30 252.7 10.3 144 1224-1369 84-232 (235)
23 1d2v_A Myeloperoxidase; heme-p 99.9 1.1E-25 3.7E-30 219.1 6.5 94 173-266 1-102 (104)
24 1b63_A MUTL; DNA mismatch repa 99.1 7E-11 2.4E-15 136.8 6.2 126 1223-1359 42-182 (333)
25 3q6m_A Heat shock protein HSP 98.9 2.4E-10 8.3E-15 135.2 2.2 77 1-78 352-442 (448)
26 1h7s_A PMS1 protein homolog 2; 98.9 7.5E-10 2.6E-14 129.7 5.5 136 1220-1362 49-196 (365)
27 3h4l_A DNA mismatch repair pro 98.8 1.2E-09 4.1E-14 127.8 5.2 128 1223-1360 43-184 (367)
28 3na3_A DNA mismatch repair pro 98.5 1.2E-08 4.2E-13 118.5 0.1 127 1223-1360 46-187 (348)
29 3hjc_A Heat shock protein 83-1 98.3 1.4E-07 4.7E-12 112.3 1.2 52 1-52 368-428 (444)
30 1mu5_A Type II DNA topoisomera 97.8 6.3E-06 2.2E-10 99.6 3.6 124 1224-1358 56-196 (471)
31 1kij_A DNA gyrase subunit B; t 97.7 1E-05 3.5E-10 95.6 2.8 140 1223-1371 54-207 (390)
32 2zbk_B Type 2 DNA topoisomeras 97.6 1.7E-05 5.9E-10 97.0 3.2 134 1224-1368 55-206 (530)
33 3fv5_A DNA topoisomerase 4 sub 97.5 2.3E-05 7.8E-10 84.7 2.0 141 1223-1371 39-192 (201)
34 1sf8_A Chaperone protein HTPG; 97.4 2.1E-05 7.1E-10 79.1 -0.5 40 1-44 78-117 (126)
35 2q2e_B Type 2 DNA topoisomeras 97.1 8.1E-05 2.8E-09 92.5 0.4 135 1224-1369 61-212 (621)
36 2o1u_A Endoplasmin; GRP94, HSP 97.0 0.00015 5.3E-09 90.4 1.2 44 1-44 605-648 (666)
37 1s16_A Topoisomerase IV subuni 96.7 0.00064 2.2E-08 80.4 3.2 139 1223-1371 53-206 (390)
38 4duh_A DNA gyrase subunit B; s 96.3 0.0012 4.2E-08 72.2 1.9 139 1223-1371 57-209 (220)
39 4emv_A DNA topoisomerase IV, B 96.3 0.0019 6.6E-08 70.9 3.5 139 1223-1371 62-215 (226)
40 1zxm_A TOPO IIA ATPase, DNA to 96.2 0.0022 7.4E-08 76.1 3.9 143 1223-1371 75-233 (400)
41 1ei1_A DNA gyrase B, GYRB; ATP 96.1 0.0023 7.8E-08 75.7 3.4 139 1223-1371 56-208 (391)
42 3cwv_A DNA gyrase, B subunit, 96.0 0.0079 2.7E-07 70.6 7.3 133 1223-1371 52-196 (369)
43 3peh_A Endoplasmin homolog; st 95.8 0.0012 4.1E-08 74.5 -1.0 88 436-523 157-245 (281)
44 3nmq_A Heat shock protein HSP 95.6 0.0015 5E-08 72.4 -1.1 78 436-513 149-226 (239)
45 3lnu_A Topoisomerase IV subuni 95.3 0.011 3.7E-07 70.2 4.8 139 1223-1370 72-224 (408)
46 3ttz_A DNA gyrase subunit B; p 94.3 0.021 7E-07 61.6 3.4 120 1223-1371 53-182 (198)
47 3ied_A Heat shock protein; HSP 93.5 0.014 4.9E-07 65.0 0.2 66 442-507 199-270 (272)
48 3o0i_A HSP90AA1 protein; HSP90 93.1 0.015 5.1E-07 65.0 -0.4 76 444-519 178-253 (256)
49 1pvg_A DNA topoisomerase II; G 92.7 0.044 1.5E-06 65.3 2.7 110 1223-1340 87-209 (418)
50 3jz3_A Sensor protein QSEC; he 91.9 0.038 1.3E-06 57.9 0.9 79 1224-1339 138-216 (222)
51 1qy5_A Endoplasmin; GRP94, NEC 90.3 0.046 1.6E-06 61.6 -0.5 77 444-521 151-228 (269)
52 4ew8_A Sensor protein DIVL; si 89.9 0.075 2.6E-06 57.7 0.8 32 1223-1254 175-208 (268)
53 3ehh_A Sensor kinase (YOCF pro 87.1 0.11 3.7E-06 54.7 -0.3 28 1223-1250 149-178 (218)
54 3t0h_A Heat shock protein HSP 87.0 0.11 3.8E-06 57.1 -0.3 73 445-517 151-223 (228)
55 1ysr_A Sensor-type histidine k 86.8 0.12 4.3E-06 51.1 -0.0 35 1223-1257 65-101 (150)
56 1id0_A PHOQ histidine kinase; 86.7 0.19 6.6E-06 49.6 1.3 31 1224-1254 63-95 (152)
57 3ehg_A Sensor kinase (YOCF pro 84.0 0.1 3.4E-06 50.9 -2.2 28 1223-1250 59-88 (128)
58 3sl2_A Sensor histidine kinase 83.1 0.23 7.7E-06 50.8 -0.1 59 1223-1291 63-125 (177)
59 3d36_A Sporulation kinase B; G 82.8 0.44 1.5E-05 50.5 2.0 32 1225-1256 147-178 (244)
60 2btz_A Pyruvate dehydrogenase 81.3 0.5 1.7E-05 55.2 1.9 64 1224-1292 259-324 (394)
61 3zxo_A Redox sensor histidine 81.2 0.29 1E-05 47.1 -0.1 26 1223-1249 62-89 (129)
62 1gkz_A [3-methyl-2-oxobutanoat 80.7 0.31 1.1E-05 56.8 -0.2 31 1224-1254 267-299 (388)
63 1y8o_A [pyruvate dehydrogenase 80.6 0.65 2.2E-05 54.9 2.6 65 1224-1292 282-348 (419)
64 1i58_A Chemotaxis protein CHEA 80.3 0.54 1.9E-05 48.5 1.6 28 1223-1250 79-108 (189)
65 2c2a_A Sensor histidine kinase 80.2 0.26 9E-06 53.3 -0.9 35 1223-1257 161-197 (258)
66 4gfh_A DNA topoisomerase 2; to 79.9 1.4 4.7E-05 58.8 5.5 124 1224-1357 83-223 (1177)
67 1bxd_A ENVZ(290-450), protein 77.7 0.31 1E-05 48.9 -1.3 59 1222-1292 64-124 (161)
68 2e0a_A Pyruvate dehydrogenase 76.7 0.64 2.2E-05 54.4 0.9 65 1224-1292 258-324 (394)
69 1th8_A Anti-sigma F factor; SP 76.5 0.83 2.8E-05 45.1 1.5 58 1224-1297 63-122 (145)
70 2cg9_A ATP-dependent molecular 72.9 0.46 1.6E-05 59.7 -1.7 80 436-515 136-216 (677)
71 1b3q_A Protein (chemotaxis pro 71.5 1.3 4.4E-05 51.8 1.7 29 1223-1251 138-168 (379)
72 1yc1_A HSP 86, heat shock prot 66.5 1.1 3.6E-05 50.4 -0.5 71 445-515 187-257 (264)
73 1d2v_A Myeloperoxidase; heme-p 66.2 5.6 0.00019 38.4 4.6 67 604-680 4-72 (104)
74 2q8g_A [pyruvate dehydrogenase 45.0 13 0.00043 43.6 3.8 65 1224-1292 271-337 (407)
75 3a0y_A Sensor protein; ATP-LID 44.5 7.1 0.00024 37.9 1.4 33 1223-1255 67-101 (152)
76 1r62_A Nitrogen regulation pro 44.2 5.3 0.00018 39.2 0.3 33 1222-1254 68-112 (160)
77 2wer_A ATP-dependent molecular 43.6 2.9 9.8E-05 45.4 -1.9 67 445-511 145-212 (220)
78 3zxq_A Hypoxia sensor histidin 43.4 3.9 0.00013 38.8 -0.7 26 1223-1249 58-85 (124)
79 2gqp_A Endoplasmin; GRP94, HSP 35.9 5.4 0.00018 43.8 -1.2 65 445-510 156-221 (236)
80 3a0r_A Sensor protein; four he 32.7 12 0.0004 41.7 0.8 32 1223-1254 264-297 (349)
81 1y4s_A Chaperone protein HTPG; 31.5 6.8 0.00023 48.4 -1.5 62 444-507 150-211 (559)
82 2ioq_A Chaperone protein HTPG; 28.5 9.8 0.00033 47.6 -0.8 61 445-507 151-211 (624)
No 1
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ...
Probab=100.00 E-value=4.8e-115 Score=1063.58 Aligned_cols=417 Identities=28% Similarity=0.465 Sum_probs=354.5
Q ss_pred CCCCCccccCCCCCCccccCCccccccccccccccCCCCCCCCCCCCCCCCCCCCCchhhhHHHHHHhhcccccccCccc
Q psy16067 610 TSGNCRPILIPSNDDFYSQFNRRCLEYKRSLAINCSVGALQPDKICPGRESNPRPSAYKADVLATKLIRLKNFFFTDVET 689 (1386)
Q Consensus 610 ~~p~C~pI~vp~~Dp~~~~~~~~Cm~f~RS~~~~c~~G~~~~~~~~~~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1386)
.||+|+||+||++||+|...+ .||+|+||.++ |+.|.. . ..
T Consensus 135 ~~~~C~pI~ip~~Dp~~~~~~-~Cm~f~RS~~~-~~~~~~-----------~--------------------------~~ 175 (595)
T 3q9k_A 135 QGDNCFPIMFPKNDPKLKTQG-KCMPFFRAGFV-CPTPPY-----------Q--------------------------SL 175 (595)
T ss_dssp CBTTBCCEECCTTCHHHHHSC-SEECCBCBCBS-SCSSCC-----------C--------------------------SS
T ss_pred CCCCceeeeCCCCCCcccCCC-ceeEeecCCCc-CCCCCC-----------C--------------------------cc
Confidence 578999999999999997655 49999999986 544310 0 01
Q ss_pred cccccccccCcccCCcCCCCCHHhhHhhhcCCC--Cceeeecc---CCccCCCCCCC--CCCCC---CCCccccccCCcc
Q psy16067 690 CTFQIVQSTHFIDVSFMYGSHPDKARELRSLSR--GKLRVREV---NGRTFMPTGDP--SNCVN---ASSNICYDAGDIR 759 (1386)
Q Consensus 690 ~reQiNq~TsfLD~S~VYGSs~~~a~~LRsf~~--G~Lk~~~~---~g~~llP~~~~--~~C~~---~~~~~Cf~aGD~R 759 (1386)
+|||||++|||||||+||||+++++++||+|++ |+||++.. +|+.+||.... ..|.. .....||.+||.|
T Consensus 176 ~reQiN~~Ts~lD~S~VYGss~~~~~~LR~~~~~~G~Lk~~~~~~~~g~~~lP~~~~~~~~c~~~~~~~~~~cf~aGD~R 255 (595)
T 3q9k_A 176 AREQINAVTSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYLPFNNKKPSPCEFINTTARVPCFLAGDFR 255 (595)
T ss_dssp CCCBEECSCSSSSCHHHHCSSHHHHHHTBCCSSTTCCBCCCSSCCBTTBCCCCBCCCSSCHHHHTCTTTCCCCBCCSSTT
T ss_pred hHhhhccccceeeeeeccCCCHHHHHHHhCCCCCCceeecccccCCCCccCCCCCCCCCCcccccCCCCCCcccccCCcc
Confidence 379999999999999999999999999999998 99998875 78899998643 35742 1235699999999
Q ss_pred ccccchhhhHHHhHhhhchHHHHHHHhhCCCCCCchhHHHHHhHhhhhheeeeeeecccccccccccccccchhhhhhhh
Q psy16067 760 VNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGDIRVNQQLDLAVSQT 839 (1386)
Q Consensus 760 ~Ne~pgLtalhtlflReHNrIA~~L~~iNP~W~~~De~lfq~AR~i~ia~~q~I~~~e~LP~llGD~R~NEn~~L~alhT 839 (1386)
+||+|+|++|||||+|||||||++|+++||+|+
T Consensus 256 ~ne~p~L~~lhtlflREHNria~~L~~~nP~W~----------------------------------------------- 288 (595)
T 3q9k_A 256 ASEQILLATAHTLLLREHNRLARELKKLNPHWN----------------------------------------------- 288 (595)
T ss_dssp TTSBHHHHHHHHHHHHHHHHHHHHHHHHCTTCC-----------------------------------------------
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-----------------------------------------------
Confidence 999999999999999999999999999999988
Q ss_pred HHHHHhHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhhhhhhhhhchhhhhhccchhhhcCCCCCCCCCccCCCCCCCCc
Q psy16067 840 VWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGYFQGYDPEVNPS 919 (1386)
Q Consensus 840 lflReHNriA~~L~~~Np~Ws~~DE~LFQEARrIViA~~QhItYnEfLP~LLG~~~~~~~gL~~~~~G~y~gYd~~vdp~ 919 (1386)
||+|||||||||||+||||||+||||+|||.+ |.++ .|+|.|
T Consensus 289 -----------------------dE~LfQeAR~Iv~A~~Q~Ity~E~LP~ilG~~-~~~~------~~~~~g-------- 330 (595)
T 3q9k_A 289 -----------------------GEKLYQEARKILGAFIQIITFRDYLPIVLGSE-MQKW------IPPYQG-------- 330 (595)
T ss_dssp -----------------------HHHHHHHHHHHHHHHHHHHHHHTHHHHHHGGG-HHHH------SCSCCC--------
T ss_pred -----------------------HHHHHHHHHHHHHHHeeeeeHHHHHHHHhCch-hhhh------CCCccC--------
Confidence 89999999999999999999999999999998 5542 133444
Q ss_pred chhhhcccccccccccccCCCCCCCCCCccCCCCCCCCcchHHHHhhhhccccccCccceeeccccccc---CCCCCccc
Q psy16067 920 TLADFAAGAFRGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGLHSLIPGTIKLVNERRVT---NQELPFSS 996 (1386)
Q Consensus 920 i~neFAtaAfR~hs~~~~~~l~~~~~~~~~~Yd~~vnpsi~~EFatAAfRfgHSlI~~~i~~~~~~~~~---~~~~~l~~ 996 (1386)
|++.++|+|++|| +||||||||+|++.+.++++.+.. ...++|.+
T Consensus 331 -------------------------------Y~~~v~p~i~neF-~aafRfgHsli~~~~~~~~~~~~~~~~~~~~~L~~ 378 (595)
T 3q9k_A 331 -------------------------------YNNSVDPRISNVF-TFAFRFGHMEVPSTVSRLDENYQPWGPEAELPLHT 378 (595)
T ss_dssp -------------------------------CCTTSCCCCBTTH-HHHGGGGGGGCCSEEECBCTTSSBCSTTCEEEGGG
T ss_pred -------------------------------CCCCCCCccHHHH-HHHHHhHHhhCcchhhccCccccccCCCCceeHHH
Confidence 5566677788889 899999999999999998876543 35789999
Q ss_pred cccCcccccccccchhhhhhhhhhhhhh--hcCCCCCHHHHhhccccCCCCccccccccccCcc----------hhhhHH
Q psy16067 997 TMQHPGDILEVMDVFDSTLRGLTNQLQQ--YQDRFITEQTIDFLFRVGSLSLEKVIVDLVGLTL----------GFFYLW 1064 (1386)
Q Consensus 997 ~~~~p~~il~~~~~~d~llrGl~~q~~~--~~D~~i~~~l~n~LF~~~~~~~~~~g~DL~~lni----------~n~~r~ 1064 (1386)
.||+|+.++. .+++|.+++||+.|+++ ..|.+++++|+++||+.... ..++||+++|| ||.||+
T Consensus 379 ~ff~~~~~~~-~~gid~llrGl~~q~a~~~~~d~~~~~~l~~~Lf~~~~~---~~g~DL~alnIqRgRdhGlp~yn~~R~ 454 (595)
T 3q9k_A 379 LFFNTWRIIK-DGGIDPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPTHK---IHGFDLAAINLQRCRDHGMPGYNSWRG 454 (595)
T ss_dssp GBTCCHHHHT-TTCSHHHHHHHHHSEEECCCTTSCSCHHHHTCEECTTSC---SEEECHHHHHHHHHHHTTCCCHHHHHH
T ss_pred HhcChHHhhh-ccchHHHHHHHhhCcccccCCCccCCHHHHHHhccCCCc---cccccHHHHHHHHHHHhCCCCHHHHHH
Confidence 9999986553 56899999999999998 88999999999999985432 12678877766 799999
Q ss_pred hhCCC--------------HHHHHHHHHhcCCCCccccceeeecccccCCCCcchHHHHHHHHHHHHhhcCCcccccCCC
Q psy16067 1065 YCGGF--------------LLQVTRLSQVYRGVNDIDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYKYGDRYFYEGPP 1130 (1386)
Q Consensus 1065 ~cgL~--------------~~~i~~L~~lY~~vdDIDL~vGgLaE~p~~G~~vGPTf~CII~~QF~rLr~GDRFwYEn~~ 1130 (1386)
+|||+ ++++++|++||++|||||||||||+|++++|+++||||+|||++||+|||+||||||||
T Consensus 455 ~~gl~~~~sf~dl~~~~~~~~~~~~l~~lY~~~d~iDl~vG~l~E~~~~g~~~Gptf~~ii~~qf~~lr~gDRf~yen-- 532 (595)
T 3q9k_A 455 FCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWEN-- 532 (595)
T ss_dssp HTTCCCCCSHHHHHHHHTCHHHHHHHHHHHSSGGGSCHHHHHHHSCCCTTBSSCHHHHHHHHHHHHHHHHTCTTCTTS--
T ss_pred HcCCCCCCCHHHHhhhcCcHHHHHHHHHHhCCccccceeecccccccCCCCCcCHHHHHHHHHHHHHHHhcCCCeecC--
Confidence 99996 12468999999999999999999999999999999999999999999999999999996
Q ss_pred CCCCCCcChhhHHHHHhhccccceecccCCccccccCCCCCCCCCC-CCCCCCCCCCCCCCCCCCcc
Q psy16067 1131 ATNPGAFTPGKQLTLTSLTSLASLCIFSCFQALDKIRPSNHPGPNS-LMDQPCRGGAAPGPGDGDVV 1196 (1386)
Q Consensus 1131 ~~~p~~FT~~qql~~irk~sla~l~~~~~sDaiDkIQps~f~~pn~-l~nv~C~~~~~~~~~~~~~~ 1196 (1386)
|+.||++ |+++|||+|||+|+|.+ + .++.||+++|..++. ...++|. .||++|+..|+
T Consensus 533 ---~~~ft~~-ql~ei~~~sla~iic~n-~-~i~~vq~~~F~~~~~~n~~v~C~--~ip~~dL~~W~ 591 (595)
T 3q9k_A 533 ---PGVFTEK-QRDSLQKVSFSRLICDN-T-HITKVPLHAFQANNYPHDFVDCS--TVDKLDLSPWA 591 (595)
T ss_dssp ---BTTBCHH-HHHHHTTCCHHHHHHHH-S-SCCEEESSTTSCCCTTTTEEEGG--GSCCCCCGGGC
T ss_pred ---CCcCCHH-HHHHHHhCCHHHHHhcC-C-CcccccHhhccCCCCCCCCccCC--CCCCCChHHhh
Confidence 6899997 89999999999987653 3 378999999985442 2347895 49999999986
No 2
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C*
Probab=100.00 E-value=1.3e-93 Score=857.02 Aligned_cols=422 Identities=27% Similarity=0.443 Sum_probs=357.4
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCCCccccCCccccccccccccccCCCCCCCCCCCCCCCCCCCCCchhhhHHHHHHhh
Q psy16067 599 CCSDSGDRVRSTSGNCRPILIPSNDDFYSQFNRRCLEYKRSLAINCSVGALQPDKICPGRESNPRPSAYKADVLATKLIR 678 (1386)
Q Consensus 599 Cc~~~~~~~~~~~p~C~pI~vp~~Dp~~~~~~~~Cm~f~RS~~~~c~~G~~~~~~~~~~~~~~pr~~~~~~~~~~~~~~~ 678 (1386)
||..+|. .||+|+||+||++||+|.. +.+||+|+||.++ |+.|..
T Consensus 2 ~c~~~c~----~~~~C~pI~ip~~Dp~~~~-~~~cl~f~Rs~~~-~~~g~~----------------------------- 46 (466)
T 1d2v_C 2 NCETSCV----QQPPCFPLKIPPNDPRIKN-QADCIPFFRSCPA-CPGSNI----------------------------- 46 (466)
T ss_dssp CTTTCCC----CCTTBCCEECCTTCSSCCC-TTCEECCBCCCBS-STTCSS-----------------------------
T ss_pred CCcccCC----CCCCCcceeCCCCCCCcCC-CCcceeeecCccc-cCCCCC-----------------------------
Confidence 4544453 5789999999999999963 4589999999986 655410
Q ss_pred cccccccCccccccccccccCcccCCcCCCCCHHhhHhhhcCCC--Cceeeec---cCCccCCCCCC--CCCCCCC---C
Q psy16067 679 LKNFFFTDVETCTFQIVQSTHFIDVSFMYGSHPDKARELRSLSR--GKLRVRE---VNGRTFMPTGD--PSNCVNA---S 748 (1386)
Q Consensus 679 ~~~~~~~~~~~~reQiNq~TsfLD~S~VYGSs~~~a~~LRsf~~--G~Lk~~~---~~g~~llP~~~--~~~C~~~---~ 748 (1386)
++|||+|++|||||||+||||+++++++||+|++ |+||++. .+|+.+||... +..|... .
T Consensus 47 ----------~~req~N~~T~~lD~S~vYGs~~~~~~~LR~~~~~~G~Lk~~~~~~~~g~~~lP~~~~~~~~c~~~~~~~ 116 (466)
T 1d2v_C 47 ----------TIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSA 116 (466)
T ss_dssp ----------SCCCBEECSCSSSSCHHHHCSSHHHHHHHBCCSSSSCCBCCCSSCCBTTBCCCCBCCCTTCSGGGGCTTT
T ss_pred ----------CHHHHhhccccccccccCcCCCHHHHHHHhccCCCCCeeccCCccCCCCCcCCCCCCCCCCcccccccCC
Confidence 1279999999999999999999999999999987 9999875 26788999753 3457531 2
Q ss_pred CccccccCCccccccchhhhHHHhHhhhchHHHHHHHhhCCCCCCchhHHHHHhHhhhhheeeeeeeccccccccccccc
Q psy16067 749 SNICYDAGDIRVNQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGDIRV 828 (1386)
Q Consensus 749 ~~~Cf~aGD~R~Ne~pgLtalhtlflReHNrIA~~L~~iNP~W~~~De~lfq~AR~i~ia~~q~I~~~e~LP~llGD~R~ 828 (1386)
...||.+||.|+||+|+|++|||||+|||||||++|+++||+|+
T Consensus 117 ~~~cf~~GD~R~ne~p~l~~lhtlflReHNria~~L~~~nP~W~------------------------------------ 160 (466)
T 1d2v_C 117 RIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWD------------------------------------ 160 (466)
T ss_dssp CCCCBCCSSTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHCTTCC------------------------------------
T ss_pred CcchhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHhCCCCC------------------------------------
Confidence 35699999999999999999999999999999999999999988
Q ss_pred ccchhhhhhhhHHHHHhHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhhhhhhhhhchhhhhhccchhhhcCCCCCCCCC
Q psy16067 829 NQQLDLAVSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGY 908 (1386)
Q Consensus 829 NEn~~L~alhTlflReHNriA~~L~~~Np~Ws~~DE~LFQEARrIViA~~QhItYnEfLP~LLG~~~~~~~gL~~~~~G~ 908 (1386)
||+||||||+||+|+||||||+||||+|||...|..+ .|+
T Consensus 161 ----------------------------------DE~LFqeAR~Iv~a~~Q~I~~~EyLp~ilG~~~~~~~------~~~ 200 (466)
T 1d2v_C 161 ----------------------------------GERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKY------LPT 200 (466)
T ss_dssp ----------------------------------HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH------SCC
T ss_pred ----------------------------------hHHHHHHHHHHHHHHHHHHhHHHHHHHHhCchhhhhc------CCc
Confidence 8999999999999999999999999999999888765 144
Q ss_pred ccCCCCCCCCcchhhhcccccccccccccCCCCCCCCCCccCCCCCCCCcchHHHHhhhhccccccCccceeeccccccc
Q psy16067 909 FQGYDPEVNPSTLADFAAGAFRGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGLHSLIPGTIKLVNERRVT 988 (1386)
Q Consensus 909 y~gYd~~vdp~i~neFAtaAfR~hs~~~~~~l~~~~~~~~~~Yd~~vnpsi~~EFatAAfRfgHSlI~~~i~~~~~~~~~ 988 (1386)
|.| |++.++|+|++|| +||||||||+|++.+.++++++..
T Consensus 201 ~~g---------------------------------------y~~~v~p~isnEF-~aafRfgHsli~~~~~~~~~~~~~ 240 (466)
T 1d2v_C 201 YRS---------------------------------------YNDSVDPRIANVF-TNAFRYGHTLIQPFMFRLDNRYQP 240 (466)
T ss_dssp CCC---------------------------------------CCTTSCCSCBHHH-HHHGGGGGGGCCSEEECBCTTSSB
T ss_pred ccC---------------------------------------CCCCCCCchhHHH-HHHHhcccccCchhhccccccccc
Confidence 444 5566677888999 999999999999999998876532
Q ss_pred ---CCCCCccccccCcccccccccchhhhhhhhhhhhhh--hcCCCCCHHHHhhccccCCCCccccccccccCcc-----
Q psy16067 989 ---NQELPFSSTMQHPGDILEVMDVFDSTLRGLTNQLQQ--YQDRFITEQTIDFLFRVGSLSLEKVIVDLVGLTL----- 1058 (1386)
Q Consensus 989 ---~~~~~l~~~~~~p~~il~~~~~~d~llrGl~~q~~~--~~D~~i~~~l~n~LF~~~~~~~~~~g~DL~~lni----- 1058 (1386)
...++|.+.|++|+.++. .+++|+++|||+.|+++ ..|.+++++|+++||+..+ ..++||+++||
T Consensus 241 ~~~~~~~~l~~~~f~~~~~~~-~~g~d~~lrgl~~q~a~~~~~d~~l~~~l~~~lf~~~~----~~~~DL~alnIqRgRD 315 (466)
T 1d2v_C 241 MEPNPRVPLSRVFFASWRVVL-EGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVM----RIGLDLPALNMQRSRD 315 (466)
T ss_dssp CSSCSEEEGGGTTTCHHHHHH-TTCHHHHHHHHHHSEEECCBTTBCSCHHHHTCBTGGGS----SSCBCHHHHHHHHHHH
T ss_pred cCCCCceeHHHHhcChHHHhh-ccCchHHHHHHhhCccccccCchhhhHHHHHHhhcccC----ccchhHHHHHHHHHHH
Confidence 346889999999986543 56899999999999986 6799999999999998542 23678776665
Q ss_pred -----hhhhHHhhCCC--------------HHHHHHHHHhcCCCCccccceeeecccccCCCCcchHHHHHHHHHHHHhh
Q psy16067 1059 -----GFFYLWYCGGF--------------LLQVTRLSQVYRGVNDIDYYIGGLLESVIRGTLSSPSFRCVFAEAFYRYK 1119 (1386)
Q Consensus 1059 -----~n~~r~~cgL~--------------~~~i~~L~~lY~~vdDIDL~vGgLaE~p~~G~~vGPTf~CII~~QF~rLr 1119 (1386)
||.||++|||+ ++++++|++||+||||||||||+|+|++++|+.+||||+|||++||+|||
T Consensus 316 hGlp~YN~~R~~~gL~~~~tf~dl~~~~~d~~~~~~L~~lY~~~d~vDL~vG~laE~~~~G~~~Gptf~~ii~~qf~rLr 395 (466)
T 1d2v_C 316 HGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLR 395 (466)
T ss_dssp TTCCCHHHHHHHTTCCCCCSHHHHHHHHTCHHHHHHHHHHHSSGGGSCHHHHHHHSCCCTTCSSCHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCCCCCCHHHHhhccCCHHHHHHHHHHhCCccccceeecccccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 79999999996 23578999999999999999999999999999999999999999999999
Q ss_pred cCCcccccCCCCCCCCCcChhhHHHHHhhccccceecccCCccccccCCC-CCCCCCCC-CCCCCCCCCCCCCCCCCcc
Q psy16067 1120 YGDRYFYEGPPATNPGAFTPGKQLTLTSLTSLASLCIFSCFQALDKIRPS-NHPGPNSL-MDQPCRGGAAPGPGDGDVV 1196 (1386)
Q Consensus 1120 ~GDRFwYEn~~~~~p~~FT~~qql~~irk~sla~l~~~~~sDaiDkIQps-~f~~pn~l-~nv~C~~~~~~~~~~~~~~ 1196 (1386)
+|||||||| |+.||++ |+++||++||++|+|.+ + .+..||++ +|..++.. ..++|. .||++|+..|+
T Consensus 396 ~gDRf~yen-----~~~ft~~-ql~ei~~~sl~~iic~n-~-~~~~iq~~~~F~~~~~~n~~~~C~--~ip~~dl~~w~ 464 (466)
T 1d2v_C 396 DGDRFWWEN-----EGVFSMQ-QRQALAQISLPRIICDN-T-GITTVSKNNIFMSNSYPRDFVNCS--TLPALNLASWR 464 (466)
T ss_dssp HTCTTCTTS-----TTTSCHH-HHHHHTTCCHHHHHHHH-S-SCCEEECSCTTTCCSTTTTEEEGG--GSCCCCCGGGS
T ss_pred hcCcccccC-----CCcccch-hhHHHHhCCHHHHHHhc-C-CCcccCCCccccCCCCCCCCcCcc--cCCCCCchhhc
Confidence 999999995 6899996 89999999999986643 3 36789999 99876632 337894 69999999985
No 3
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=100.00 E-value=4e-78 Score=736.37 Aligned_cols=332 Identities=19% Similarity=0.289 Sum_probs=268.7
Q ss_pred ccccCcccCCcCCCCCHHhhHhhhcCCCCceeeeccCCccCCCCCC--CCCCCCC---CCccccccCCccccccchhhhH
Q psy16067 695 VQSTHFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGD--PSNCVNA---SSNICYDAGDIRVNQQLDLAVS 769 (1386)
Q Consensus 695 Nq~TsfLD~S~VYGSs~~~a~~LRsf~~G~Lk~~~~~g~~llP~~~--~~~C~~~---~~~~Cf~aGD~R~Ne~pgLtal 769 (1386)
|++|||||||+||||+++++++||+|++|+||++..+|+.+||... +..|... +...||.+||.|+||+|+|++|
T Consensus 191 n~~t~~lD~S~IYGss~~~~~~LR~~~~G~Lk~~~~~g~~~pP~~~~~~~~~~~~~~~~~~~cf~~GD~R~ne~pgL~al 270 (587)
T 3nt1_A 191 RGLGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMY 270 (587)
T ss_dssp SCTTCSCCCHHHHCSSHHHHHHHBCSSTTCBCCEEETTEEECCBHHHHCCCCCCCTTSCGGGCBCCSSTTTTSCHHHHHH
T ss_pred cCccceeeeccCCCCCHHHHHhccCCCCCeeeeecCCCccCCCCCCCcccccccCCCCCcccccccCCcccccChHHHHH
Confidence 6789999999999999999999999999999998888999998742 2234321 2457999999999999999999
Q ss_pred HHhHhhhchHHHHHHHhhCCCCCCchhHHHHHhHhhhhheeeeeeecccccccccccccccchhhhhhhhHHHHHhHHHH
Q psy16067 770 QTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGDIRVNQQLDLAVSQTVWLRFHNYVA 849 (1386)
Q Consensus 770 htlflReHNrIA~~L~~iNP~W~~~De~lfq~AR~i~ia~~q~I~~~e~LP~llGD~R~NEn~~L~alhTlflReHNriA 849 (1386)
||||+|||||||++|+++||+|+
T Consensus 271 htlflREHNriA~~L~~~nP~W~--------------------------------------------------------- 293 (587)
T 3nt1_A 271 ATIWLREHNRVCDILKQEHPEWG--------------------------------------------------------- 293 (587)
T ss_dssp HHHHHHHHHHHHHHHHC-CTTCC---------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCCCc---------------------------------------------------------
Confidence 99999999999999999999888
Q ss_pred HHHHhcCCCCCCchhHHHHHHHHHHHhhhhhhhhhchhhhhhccchhhhcCCCCCCCCCccCCCCCCCCcchhhhccccc
Q psy16067 850 EKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAF 929 (1386)
Q Consensus 850 ~~L~~~Np~Ws~~DE~LFQEARrIViA~~QhItYnEfLP~LLG~~~~~~~gL~~~~~G~y~gYd~~vdp~i~neFAtaAf 929 (1386)
||+|||||||||+|+||||||+||||.|||.+.+.. |||.+..
T Consensus 294 -------------DE~LFQeAR~Iv~A~~Q~Ity~EyLP~ilG~~~~~~-------------~dp~~~~----------- 336 (587)
T 3nt1_A 294 -------------DEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLK-------------FDPELLF----------- 336 (587)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHHTHHHHHHCCSSCCC-------------CCGGGGT-----------
T ss_pred -------------HHHHHHHHHHHHHhhheeeeHHHHHHHhcCcchhcc-------------cCccccc-----------
Confidence 899999999999999999999999999999765432 3333210
Q ss_pred ccccccccCCCCCCCCCCccCCCCCCCCcchHHHHhhhhccccccCccceeecccccccCCCCCccccccCccccccccc
Q psy16067 930 RGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGLHSLIPGTIKLVNERRVTNQELPFSSTMQHPGDILEVMD 1009 (1386)
Q Consensus 930 R~hs~~~~~~l~~~~~~~~~~Yd~~vnpsi~~EFatAAfRfgHSlI~~~i~~~~~~~~~~~~~~l~~~~~~p~~il~~~~ 1009 (1386)
+ +...++|+|++||++| | |+|++|++.+.+.+ ..++|+++|++|. ++. .+
T Consensus 337 ----------------~----~~~~~~~~is~eF~~a-~-~~Hslip~~~~~~~------~~~~l~~~ff~p~-~~~-~~ 386 (587)
T 3nt1_A 337 ----------------N----QQFQYQNRIASEFNTL-Y-HWHPLLPDTFNIED------QEYSFKQFLYNNS-ILL-EH 386 (587)
T ss_dssp ----------------T----SCCCSCCCCBHHHHHH-T-CCGGGSCSSEEETT------EEECHHHHTTCTH-HHH-HH
T ss_pred ----------------C----CCCCcCchHHHHHHHH-H-hccccCCcccccCC------CcccHHHHhcCcc-ccc-hh
Confidence 0 1113467899999876 4 68999999886542 3688999999995 443 46
Q ss_pred chhhhhhhhhhhhhhhcCCCCCHHHHhhccccCCCCccccccccccC----------cchhhhHHhhCCC----------
Q psy16067 1010 VFDSTLRGLTNQLQQYQDRFITEQTIDFLFRVGSLSLEKVIVDLVGL----------TLGFFYLWYCGGF---------- 1069 (1386)
Q Consensus 1010 ~~d~llrGl~~q~~~~~D~~i~~~l~n~LF~~~~~~~~~~g~DL~~l----------ni~n~~r~~cgL~---------- 1069 (1386)
++|++++||+.|+++.+|.. +| + ...++||+++ +.||.||++|||+
T Consensus 387 gid~llrgl~~q~a~~~~~~-----~n--~-------~~~~~DL~alnIqRGRDhGlp~YN~~R~~cgL~~~~tf~dl~~ 452 (587)
T 3nt1_A 387 GLTQFVESFTRQIAGRVAGG-----RN--V-------PIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTG 452 (587)
T ss_dssp HHHHHHHHHHHSBCBCSSSS-----SC--B-------CGGGHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHS
T ss_pred hHHHHHHHHHHhhhhccccc-----cc--C-------chHHHHHHHHHHHHHHhhCCCcHHHHHHHcCCCCCCCHHHhCC
Confidence 89999999999999987631 11 1 1124455544 4589999999996
Q ss_pred -HHHHHHHHHhcCCCCccccceeeecccccCCCCcchHHHHHHHHH------HHHhhcCCcccccCCCCCCCCCcChhhH
Q psy16067 1070 -LLQVTRLSQVYRGVNDIDYYIGGLLESVIRGTLSSPSFRCVFAEA------FYRYKYGDRYFYEGPPATNPGAFTPGKQ 1142 (1386)
Q Consensus 1070 -~~~i~~L~~lY~~vdDIDL~vGgLaE~p~~G~~vGPTf~CII~~Q------F~rLr~GDRFwYEn~~~~~p~~FT~~qq 1142 (1386)
++++++|++||+||||||||||||+|++++|++|||||+|| +.| |.++|.|||||+ |+.||.+|.
T Consensus 453 ~~~~~~~L~~lY~~~ddIDL~vGglaE~~~pG~~vGpTf~ci-~~qf~l~~~~~~~r~gDrfw~-------~~~Ft~~qg 524 (587)
T 3nt1_A 453 EKEMAAELKALYSDIDVMELYPALLVEKPRPDAIFGETMVEL-GAPFSLKGLMGNPICSPQYWK-------PSTFGGEVG 524 (587)
T ss_dssp SSHHHHHHHHHHSSGGGCCHHHHHHHSCCSTTCSSCHHHHHH-HHHHHHHHHHTSGGGSTTTSS-------GGGGTSHHH
T ss_pred CHHHHHHHHHHhCCHhheeeecccccccCCCCccHHHHHHHH-HHHHHHHHHhcCcccCCcccC-------cCccChHHH
Confidence 24789999999999999999999999999999999999999 666 489999999995 468999866
Q ss_pred HHHHhhccccceecccCCccccccCCCCCCCCCC
Q psy16067 1143 LTLTSLTSLASLCIFSCFQALDKIRPSNHPGPNS 1176 (1386)
Q Consensus 1143 l~~irk~sla~l~~~~~sDaiDkIQps~f~~pn~ 1176 (1386)
+++||++||++|+|.+ ++. ++..+|..|+.
T Consensus 525 l~~I~~~sL~~lic~N-~~~---~p~~~F~~p~~ 554 (587)
T 3nt1_A 525 FKIINTASIQSLICNN-VKG---CPFTSFNVQDP 554 (587)
T ss_dssp HHHHHTCCHHHHHHHH-STT---CCCCCSBCC--
T ss_pred HHHHHHCCHHHHHHhC-CCC---CCcceeECCCc
Confidence 9999999999986642 332 78888877665
No 4
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=100.00 E-value=1e-75 Score=715.22 Aligned_cols=333 Identities=19% Similarity=0.271 Sum_probs=269.9
Q ss_pred ccccccCcccCCcCCCCCHHhhHhhhcCCCCceeeeccCCccCCCCCCCCCCC--C---CCCccccccCCccccccchhh
Q psy16067 693 QIVQSTHFIDVSFMYGSHPDKARELRSLSRGKLRVREVNGRTFMPTGDPSNCV--N---ASSNICYDAGDIRVNQQLDLA 767 (1386)
Q Consensus 693 QiNq~TsfLD~S~VYGSs~~~a~~LRsf~~G~Lk~~~~~g~~llP~~~~~~C~--~---~~~~~Cf~aGD~R~Ne~pgLt 767 (1386)
|+|++|||||||+||||+++++++||+|++|+||++..+|+.++|......|. . .+...||.+||.|+||+|+|+
T Consensus 189 ~~N~~T~~lD~S~vYGs~~~~~~~LR~~~~G~Lk~~~~~g~~~~P~~~~~~~~~~~~~~~~~~~cf~~GD~R~ne~p~L~ 268 (553)
T 1q4g_A 189 FTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLM 268 (553)
T ss_dssp BBSCTTCSSSCHHHHCSSHHHHHHHBCSSTTCBCCEEETTEEECCBTTTSCCCCCCCTTCCGGGSBCCSSTTGGGCHHHH
T ss_pred hcccccccccccccCCCCHHHHHhhhcCCCCEecccCCCCccCCCccCCCCCcccCCCCCCchhccccCccccCcCHHHH
Confidence 67999999999999999999999999999999999887888888864332221 1 123579999999999999999
Q ss_pred hHHHhHhhhchHHHHHHHhhCCCCCCchhHHHHHhHhhhhheeeeeeecccccccccccccccchhhhhhhhHHHHHhHH
Q psy16067 768 VSQTVWLRFHNYVAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGDIRVNQQLDLAVSQTVWLRFHNY 847 (1386)
Q Consensus 768 alhtlflReHNrIA~~L~~iNP~W~~~De~lfq~AR~i~ia~~q~I~~~e~LP~llGD~R~NEn~~L~alhTlflReHNr 847 (1386)
+|||||+|||||||++|+++||+|+
T Consensus 269 ~lhtlflReHNria~~L~~~nP~W~------------------------------------------------------- 293 (553)
T 1q4g_A 269 LYATIWLREHNRVCDLLKAEHPTWG------------------------------------------------------- 293 (553)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCC-------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCC-------------------------------------------------------
Confidence 9999999999999999999999988
Q ss_pred HHHHHHhcCCCCCCchhHHHHHHHHHHHhhhhhhhhhchhhhhhccchhhhcCCCCCCCCCccCCCCCCCCcchhhhccc
Q psy16067 848 VAEKLIQQNPSWSNRDELVYQEARRLVIGCFQHIVYNEWLPILIGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAG 927 (1386)
Q Consensus 848 iA~~L~~~Np~Ws~~DE~LFQEARrIViA~~QhItYnEfLP~LLG~~~~~~~gL~~~~~G~y~gYd~~vdp~i~neFAta 927 (1386)
||+|||||||||||+||||||+||||.|+|..++. .+||++...
T Consensus 294 ---------------DE~LFQeAR~Iv~a~~Q~I~~~EyLp~ilg~~~~~-----------------~~dp~~~~~---- 337 (553)
T 1q4g_A 294 ---------------DEQLFQTARLILIGETIKIVIEEYVQQLSGYFLQL-----------------KFDPELLFG---- 337 (553)
T ss_dssp ---------------HHHHHHHHHHHHHHHHHHHHHHTHHHHHHCCSSCC-----------------CCCGGGGTT----
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccc-----------------ccCcccccC----
Confidence 89999999999999999999999999999964321 233332110
Q ss_pred ccccccccccCCCCCCCCCCccCCCCCCCCcchHHHHhhhhccccccCccceeecccccccCCCCCccccccCccccccc
Q psy16067 928 AFRGESYTKDVGLSPTSSGYFQGYDPEVNPSTLADFAAGAFRGLHSLIPGTIKLVNERRVTNQELPFSSTMQHPGDILEV 1007 (1386)
Q Consensus 928 AfR~hs~~~~~~l~~~~~~~~~~Yd~~vnpsi~~EFatAAfRfgHSlI~~~i~~~~~~~~~~~~~~l~~~~~~p~~il~~ 1007 (1386)
. .-.++|+|++||++ ||| +||+|++.+.+.+ ..++|++.|++|. ++.
T Consensus 338 ------------------~-----~~~~~~~is~EF~~-ayR-~Hslip~~~~~~~------~~~~l~~~ff~~~-~~~- 384 (553)
T 1q4g_A 338 ------------------A-----QFQYRNRIAMEFNQ-LYH-WHPLMPDSFRVGP------QDYSYEQFLFNTS-MLV- 384 (553)
T ss_dssp ------------------S-----CCCCCCCCBHHHHH-HTC-CGGGSCSSEEETT------EEECHHHHTTCSS-HHH-
T ss_pred ------------------C-----CcccCcchhHHHHH-Hhc-ccccCCcccccCC------CcccHHHHhcCch-hhh-
Confidence 0 01357789999986 499 7999999887643 3578899999995 343
Q ss_pred ccchhhhhhhhhhhhhhhcC-CCCCHHHHhhccccCCCCcccccccc----------ccCcchhhhHHhhCCC-------
Q psy16067 1008 MDVFDSTLRGLTNQLQQYQD-RFITEQTIDFLFRVGSLSLEKVIVDL----------VGLTLGFFYLWYCGGF------- 1069 (1386)
Q Consensus 1008 ~~~~d~llrGl~~q~~~~~D-~~i~~~l~n~LF~~~~~~~~~~g~DL----------~~lni~n~~r~~cgL~------- 1069 (1386)
.+++|.+++||+.|+++.+| ....+ ..++|| +||+.||.||++|||+
T Consensus 385 ~~g~~~ll~g~~~q~a~~~~~~~n~~---------------~~~~dL~alnIqRgRDhGlp~YN~~R~~~gL~~~~tf~d 449 (553)
T 1q4g_A 385 DYGVEALVDAFSRQPAGRIGGGRNID---------------HHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQE 449 (553)
T ss_dssp HHCHHHHHHHHHHSBCBCSSSSSCBC---------------TTTHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHH
T ss_pred cccHHHHHHHhhhchhhcccccccCc---------------HHHHHHHHHHHHHHHhhCCCcHHHHHHHcCCCCCCCHHH
Confidence 46899999999999999884 21111 112344 4555589999999996
Q ss_pred ----HHHHHHHHHhcCCCCccccceeeecccccCCCCcchHHHHHHHH-HHHHhh---cCCcccccCCCCCCCCCcChhh
Q psy16067 1070 ----LLQVTRLSQVYRGVNDIDYYIGGLLESVIRGTLSSPSFRCVFAE-AFYRYK---YGDRYFYEGPPATNPGAFTPGK 1141 (1386)
Q Consensus 1070 ----~~~i~~L~~lY~~vdDIDL~vGgLaE~p~~G~~vGPTf~CII~~-QF~rLr---~GDRFwYEn~~~~~p~~FT~~q 1141 (1386)
++++++|++||+||||||||||+|+|++++|+++||||+|||++ ||++|+ +||||||. |+.||++
T Consensus 450 l~~d~~~~~~L~~lY~~~ddiDL~vG~laE~~~~G~~~Gpt~~~ii~~~~~~~l~~~~~~d~~~~~------~~~ft~~- 522 (553)
T 1q4g_A 450 LTGEKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEMGAPFSLKGLLGNPICSPEYWK------ASTFGGE- 522 (553)
T ss_dssp HHSSSHHHHHHHHHHSSGGGCCHHHHHHHSCBCTTCSSBHHHHHHHHHHHHHHHHTSGGGSTTTCS------GGGGTSH-
T ss_pred hcCCHHHHHHHHHHhcChhhccccccccccccCCCCCccHHHHHHHHHHHHHHHhhCcCCCccccC------CCCcCHH-
Confidence 24789999999999999999999999999999999999999998 799997 69999993 6899998
Q ss_pred HHHHH-hhccccceecccCCccccccCCCCCCCCC
Q psy16067 1142 QLTLT-SLTSLASLCIFSCFQALDKIRPSNHPGPN 1175 (1386)
Q Consensus 1142 ql~~i-rk~sla~l~~~~~sDaiDkIQps~f~~pn 1175 (1386)
|+.+| +++|||+|+|.+ ++ .+|..+|..|+
T Consensus 523 ql~ei~~~~sla~iic~n-~~---~~p~~~F~~p~ 553 (553)
T 1q4g_A 523 VGFNLVKTATLKKLVCLN-TK---TCPYVSFHVPD 553 (553)
T ss_dssp HHHHHHHTCCHHHHHHTT-SS---SCCCCCSBCCC
T ss_pred HHHHHHHhCCHHHHHHHc-CC---CCCcccccCCC
Confidence 56655 557999987642 33 68888887663
No 5
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A*
Probab=100.00 E-value=1.4e-41 Score=380.29 Aligned_cols=159 Identities=57% Similarity=0.879 Sum_probs=150.4
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhc-CCccccccccccceeEEEeecceeEEEeecC
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQA-GADISMIGQFGVGFYSAYLVADKVTVTSKHN 1302 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~-~~~~~~IGqFGIGF~S~FmVadkV~V~Tk~~ 1302 (1386)
.|+|.+|+++++|+|+|||||||++||.++|+|||+||++.|+++++. +.+.++||||||||||||||||+|+|+||++
T Consensus 83 ~I~I~~d~~~~tLtI~DNGiGMt~edL~~~LgtIa~Sgtk~f~e~l~~~~~d~~~IGqFGVGFySaf~vadkV~V~Sk~~ 162 (281)
T 3peh_A 83 EIRISANKEKNILSITDTGIGMTKVDLINNLGTIAKSGTSNFLEAISKSGGDMSLIGQFGVGFYSAFLVADKVIVYTKNN 162 (281)
T ss_dssp CEEEEEETTTTEEEEEECSCCCCHHHHHHHHHHHHHSCHHHHHHHHHHTTCCSTTTTTTTCGGGGGGGTEEEEEEEEECT
T ss_pred EEEEEEcCCCcEEEEEeCCCCCCHHHHHHHHHHHHhHhhhhHHHhhhccccccccccccCccchhhccccCEEEEEEecC
Confidence 799999999999999999999999999999999999999999999986 5677899999999999999999999999999
Q ss_pred CCcceEEEeCCCCceEEecCC-CCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcCCCCcceEEEEeeeeccccCccc
Q psy16067 1303 DDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKEREKELSEDE 1381 (1386)
Q Consensus 1303 ~~~~~~w~s~~~~~y~i~~~~-~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~fi~~PI~l~~~~~~~~ev~~~~ 1381 (1386)
++++|.|+|+++|+|+|.+++ +++.++||+|+||||+|+.+|+++++|++||+|||+||+|||+|++++++++||+|+|
T Consensus 163 ~~~~~~Wes~g~g~fti~~~~~~~~~~~GT~I~L~Lked~~e~le~~~ik~ivkkys~fi~~pI~l~~~k~~~~ev~~~~ 242 (281)
T 3peh_A 163 DDEQYIWESTADAKFTIYKDPRGATLKRGTRISLHLKEDATNLLNDKKLMDLISKYSQFIQFPIYLLHENVYTEEVLADI 242 (281)
T ss_dssp TSCCEEEEEETTSCEEEEECTTCSTTSSEEEEEEEECGGGGGGGSHHHHHHHHHHHTTTCCSCEEEEEEEEEEEEEEHHH
T ss_pred CCCEEEEEECCCccEEEEEcCCCCCCCCCeEEEEEECCchhhhcCHHHHHHHHHHhhccCCcceEEeeeeeeeeccCcch
Confidence 889999999999999999865 4578999999999999999999999999999999999999999999999999998776
Q ss_pred c
Q psy16067 1382 E 1382 (1386)
Q Consensus 1382 ~ 1382 (1386)
+
T Consensus 243 ~ 243 (281)
T 3peh_A 243 A 243 (281)
T ss_dssp H
T ss_pred h
Confidence 4
No 6
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum}
Probab=100.00 E-value=2.5e-39 Score=355.09 Aligned_cols=146 Identities=51% Similarity=0.892 Sum_probs=136.8
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcC-CccccccccccceeEEEeecceeEEEeecC
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAG-ADISMIGQFGVGFYSAYLVADKVTVTSKHN 1302 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~-~~~~~IGqFGIGF~S~FmVadkV~V~Tk~~ 1302 (1386)
.|+|.+|+++++|+|+|||||||++||+++|+|||+||++.|+++++.+ .+.++||||||||||||||||+|+|+|| +
T Consensus 120 ~I~I~~Dk~~~tLtI~DNGiGMTkeeL~~~LgtIA~SGtk~Fle~l~~~~~d~~~IGqFGVGFySaFmVAdkV~V~Sk-~ 198 (272)
T 3ied_A 120 IIKIKPDKEKKTLTITDNGIGMDKSELINNLGTIAQSGTAKFLKQIEEGKADSNLIGQFGVGFYSSFLVSNRVEVYTK-K 198 (272)
T ss_dssp CEEEEEETTTTEEEEEECSCCCCHHHHHHHTTCSCCHHHHHHHHHHHTTSSCTTCGGGSCCGGGGGGGTEEEEEEEEE-S
T ss_pred EEEEEEeCCCCEEEEEeCCCCCCHHHHHHHHHHHhhcchhhHHHHhhcccccccccCcccceeheeeccCCEEEEEEc-C
Confidence 7999999999999999999999999999999999999999999999875 6788999999999999999999999999 7
Q ss_pred CCcceEEEeCCCCceEEecCC------CCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcCCCCcceEEEEe
Q psy16067 1303 DDEQYIWESSAGGSFTIKPDN------SEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVE 1370 (1386)
Q Consensus 1303 ~~~~~~w~s~~~~~y~i~~~~------~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~fi~~PI~l~~~ 1370 (1386)
++++|.|+|+++|+|+|++++ ++..++||+|+||||+|+.||+++++|++||+|||+||+|||+|+.+
T Consensus 199 dd~~~~WeS~g~gsfti~~~~~~~~~~g~~~~~GT~I~L~Lked~~e~le~~~ik~likkys~fi~~PI~l~~~ 272 (272)
T 3ied_A 199 EDQIYRWSSDLKGSFSVNEIKKYDQEYDDIKGSGTKIILHLKEECDEYLEDYKLKELIKKYSEFIKFPIEIWSE 272 (272)
T ss_dssp SSCEEEEEECSSSEEEEEECTTCTTCC--CCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHCTTCCSCEEECC-
T ss_pred CCceEEEEECCCCCEEEEECcccccccCCCCCCCcEEEEEECCChHHhcCHHHHHHHHHHHHhCCCCCeEEEeC
Confidence 788999999999999999764 34679999999999999999999999999999999999999999753
No 7
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1
Probab=100.00 E-value=3e-39 Score=355.08 Aligned_cols=154 Identities=77% Similarity=1.216 Sum_probs=143.5
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecceeEEEeecCC
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKHND 1303 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV~V~Tk~~~ 1303 (1386)
.|+|.+|+++++|+|+|||+|||++||.++|++||+||++.|+++++.+.+.++||||||||||+|||||+|+|+||+++
T Consensus 76 ~I~I~~d~~~~~L~I~DnGiGMt~edL~~~LgtIA~Sgtk~f~e~~~~~~d~~~IGqFGvGfySaf~vadkv~V~Sk~~~ 155 (239)
T 3nmq_A 76 KIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHND 155 (239)
T ss_dssp CEEEEEETTTTEEEEEECSCCCCHHHHHTHHHHHHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGGTEEEEEEEEECTT
T ss_pred EEEEEEeCCccEEEEEeCCCCCCHHHHHHHHHHHhcccchhhhhhhcccCCcccccccCcccccccccCCEEEEEEeeCC
Confidence 79999999999999999999999999999999999999999999998767788999999999999999999999999998
Q ss_pred CcceEEEeCCCCceEEecCCCCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcCCCCcceEEEEeeeecccc
Q psy16067 1304 DEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKEREKEL 1377 (1386)
Q Consensus 1304 ~~~~~w~s~~~~~y~i~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~fi~~PI~l~~~~~~~~ev 1377 (1386)
+++|.|+|+++|+|+|+++++++.++||+|+||||+|+.+|+++++|++||+|||+||+|||+|+.++++++|.
T Consensus 156 ~~~~~W~s~~~g~fti~~~~~~~~~~GT~I~L~lk~d~~e~l~~~~i~~lv~kys~fi~~pI~~~~~~~~~~~~ 229 (239)
T 3nmq_A 156 DEQYAWESSAGGSFTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKGE 229 (239)
T ss_dssp SCCEEEEECSTTEEEEEECCSSCCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHCTTCSSCEEECCCSCC----
T ss_pred CceeEEEECCCCcEEEEecCCCcCCCCCEEEEEECCChHHhcCHHHHHHHHHHHHhccCCceEEeeeeeccHHH
Confidence 89999999999999999876667899999999999999999999999999999999999999999888766653
No 8
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A*
Probab=100.00 E-value=2.1e-36 Score=339.13 Aligned_cols=158 Identities=50% Similarity=0.798 Sum_probs=138.9
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcC-----CccccccccccceeEEEeecceeEEE
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAG-----ADISMIGQFGVGFYSAYLVADKVTVT 1298 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~-----~~~~~IGqFGIGF~S~FmVadkV~V~ 1298 (1386)
.|+|.++++.++|+|+|||+|||++||.++|++||+|||+.|+++++.+ .+..+||||||||||+||||++|+|+
T Consensus 65 ~I~i~~d~~~~~l~I~DnGiGMt~edl~~~l~tia~Sgtk~F~~kl~~~~~~~~~d~~~IG~fGvGfySaf~va~~v~V~ 144 (269)
T 1qy5_A 65 TVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVT 144 (269)
T ss_dssp CEEEEEETTTTEEEEEECSCCCCHHHHHHHHHSCCSHHHHHHHHHHHHHHHHTCCCHHHHHHTTCGGGGGGGTEEEEEEE
T ss_pred EEEEEEcCCceEEEEEECCCCCCHHHHHHHhhhhcccccHHHHHhhhhcccccccchhhcCCccccHHHHhhccceEEEE
Confidence 6889999999999999999999999999999999999999999988754 56789999999999999999999999
Q ss_pred eecCCCcceEEEeCCCCceEEecCC-CCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcCCCCcceEEEEeeeecccc
Q psy16067 1299 SKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKEREKEL 1377 (1386)
Q Consensus 1299 Tk~~~~~~~~w~s~~~~~y~i~~~~-~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~fi~~PI~l~~~~~~~~ev 1377 (1386)
||++++.++.|++++ |+|+|.... .....+||+|+||||++..+|+++++|+++|++||+||+|||+|+++++.++||
T Consensus 145 Sk~~~~~~~~w~s~g-g~~~i~~~~~~~~~~~GT~I~L~Lk~d~~e~le~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~ 223 (269)
T 1qy5_A 145 SKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKTETVEE 223 (269)
T ss_dssp EECTTSCCEEEEECS-SCEEEEECTTCSCSSSEEEEEEEECGGGGGGGSHHHHHHHHHTTCTTCSSCEEEEEECC-----
T ss_pred EEecCCcEEEEEEeC-CEEEEEeccCCCcCCCCeEEEEEEcccchhhhhHHHHHHHHHhhhcccceeeEEeeeeeeeecc
Confidence 999988899999999 999999764 345689999999999999999999999999999999999999999999988888
Q ss_pred Ccccc
Q psy16067 1378 SEDEE 1382 (1386)
Q Consensus 1378 ~~~~~ 1382 (1386)
+++++
T Consensus 224 ~~~~~ 228 (269)
T 1qy5_A 224 PMEEE 228 (269)
T ss_dssp -----
T ss_pred Cccch
Confidence 76553
No 9
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ...
Probab=100.00 E-value=2.7e-36 Score=369.55 Aligned_cols=151 Identities=26% Similarity=0.479 Sum_probs=135.2
Q ss_pred cccchHHHHHHhhcccCCCchHHHHHHhCCCCCCCcchhcccC-CHHHHHHHHHhhCCCCcccccccccccccCCCcccC
Q psy16067 280 FGDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFM-DSEQVTRLSQVYRGVNDIDYYIGGLLESVIRGTLSS 358 (1386)
Q Consensus 280 ~g~DL~a~~IqrgRdhGip~Y~~~R~~c~l~~~~sf~dl~~~~-~~~~~~~l~~lY~~~~dvDL~~G~l~E~~~~G~~~g 358 (1386)
+|+||+|+|||||||||||+||+||++|||++++||+||+.++ +++++++|+++|++|||||||||+|+|++++|+++|
T Consensus 429 ~g~DL~alnIqRgRdhGlp~yn~~R~~~gl~~~~sf~dl~~~~~~~~~~~~l~~lY~~~d~iDl~vG~l~E~~~~g~~~G 508 (595)
T 3q9k_A 429 HGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDNIDIWIGGNAEPMVERGRVG 508 (595)
T ss_dssp EEECHHHHHHHHHHHTTCCCHHHHHHHTTCCCCCSHHHHHHHHTCHHHHHHHHHHHSSGGGSCHHHHHHHSCCCTTBSSC
T ss_pred ccccHHHHHHHHHHHhCCCCHHHHHHHcCCCCCCCHHHHhhhcCcHHHHHHHHHHhCCccccceeecccccccCCCCCcC
Confidence 4899999999999999999999999999999999999999764 788889999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhcCCcceecCCCCCCCCCCCcccccceecccccchhhccccccCCcccc-cccccccccCCccccc
Q psy16067 359 PSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFTPGKQLTLTSLTSLASWRLQKVYHAPKEKH-RFSWLTTVRGGPMTVT 437 (1386)
Q Consensus 359 pT~~cii~~qf~~l~~gDRFwyen~~~~~p~~ft~~~ql~~i~~~sl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 437 (1386)
|||+|||++||++||+|||||||| |++||++ |++|||++||+++||.|..+. ..+. .|. ..++.|..++|.
T Consensus 509 ptf~~ii~~qf~~lr~gDRf~yen-----~~~ft~~-ql~ei~~~sla~iic~n~~i~-~vq~~~F~-~~~~~n~~v~C~ 580 (595)
T 3q9k_A 509 PLLACLLGRQFQQIRDGDRFWWEN-----PGVFTEK-QRDSLQKVSFSRLICDNTHIT-KVPLHAFQ-ANNYPHDFVDCS 580 (595)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCTTS-----BTTBCHH-HHHHHTTCCHHHHHHHHSSCC-EEESSTTS-CCCTTTTEEEGG
T ss_pred HHHHHHHHHHHHHHHhcCCCeecC-----CCcCCHH-HHHHHHhCCHHHHHhcCCCcc-cccHhhcc-CCCCCCCCccCC
Confidence 999999999999999999999994 6899998 999999999999999986543 2221 233 466788888776
Q ss_pred c
Q psy16067 438 S 438 (1386)
Q Consensus 438 ~ 438 (1386)
+
T Consensus 581 ~ 581 (595)
T 3q9k_A 581 T 581 (595)
T ss_dssp G
T ss_pred C
Confidence 6
No 10
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A*
Probab=100.00 E-value=2.9e-35 Score=326.46 Aligned_cols=160 Identities=79% Similarity=1.241 Sum_probs=140.0
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecceeEEEeecCC
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKHND 1303 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV~V~Tk~~~ 1303 (1386)
+|+|.++++.++|+|.|||+|||++||.++|++||+|+++.|+++++.+.+...||||||||||+|||||+|+|+||+++
T Consensus 97 ~I~I~~d~~~~~I~I~DnG~GMt~edl~~~l~~ia~S~~~~f~~~L~~~~~~~~iG~fG~Gf~S~f~Vadkv~V~Sr~~~ 176 (256)
T 3o0i_A 97 HINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHND 176 (256)
T ss_dssp CEEEEEETTTTEEEEEECSCCCCHHHHHTHHHHHHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGGTEEEEEEEEECTT
T ss_pred EEEEEEcCCceEEEEecCCCCcCHHHHHHHHHhhccccccchhhhhcccCCccccCCCcchHHHhhccCCeEEEEEcCCC
Confidence 68898999999999999999999999999999999999999999887656778999999999999999999999999988
Q ss_pred CcceEEEeCCCCceEEecCCCCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcCCCCcceEEEEeeeeccccCccccc
Q psy16067 1304 DEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKEREKELSEDEEE 1383 (1386)
Q Consensus 1304 ~~~~~w~s~~~~~y~i~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~fi~~PI~l~~~~~~~~ev~~~~~~ 1383 (1386)
++++.|++++++.|+|.+.+....++||+|+|+||++..+|++.++|+++|+|||+||+|||+|+.++++++||+++|+|
T Consensus 177 ~~g~~w~s~gg~~~~v~~~~~~~~~~GT~I~l~LK~~~~e~~e~~~I~~iv~k~s~~l~~PI~~~~~~~~~~~~~~~~~~ 256 (256)
T 3o0i_A 177 DEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSDDEAE 256 (256)
T ss_dssp SCEEEEEECSTTEEEEEECCSSCCSSEEEEEEEECGGGGGGGCHHHHHHHHHHHCTTCSSCEEECCC-------------
T ss_pred CceEEEEEeccceEEEeeCCCCCCCCCcEEEEEEcCcchhhccHHHHHHHHHHHHhhCCCCeEEeeeeeecccCCCccCC
Confidence 88999999999999999866566799999999999999999999999999999999999999999999999999877754
No 11
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C*
Probab=100.00 E-value=1.5e-35 Score=355.46 Aligned_cols=153 Identities=25% Similarity=0.444 Sum_probs=134.3
Q ss_pred CCcccchHHHHHHhhcccCCCchHHHHHHhCCCCCCCcchhcccC-CHHHHHHHHHhhCCCCcccccccccccccCCCcc
Q psy16067 278 GEFGDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFM-DSEQVTRLSQVYRGVNDIDYYIGGLLESVIRGTL 356 (1386)
Q Consensus 278 ~~~g~DL~a~~IqrgRdhGip~Y~~~R~~c~l~~~~sf~dl~~~~-~~~~~~~l~~lY~~~~dvDL~~G~l~E~~~~G~~ 356 (1386)
+..|.||+++|||||||||||+||+||++|||++++||+||++.+ +++++++|+++|++|||||||||+|+|++++|++
T Consensus 299 ~~~~~DL~alnIqRgRDhGlp~YN~~R~~~gL~~~~tf~dl~~~~~d~~~~~~L~~lY~~~d~vDL~vG~laE~~~~G~~ 378 (466)
T 1d2v_C 299 MRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGR 378 (466)
T ss_dssp SSSCBCHHHHHHHHHHHTTCCCHHHHHHHTTCCCCCSHHHHHHHHTCHHHHHHHHHHHSSGGGSCHHHHHHHSCCCTTCS
T ss_pred CccchhHHHHHHHHHHHcCCCCHHHHHHHcCCCCCCCHHHHhhccCCHHHHHHHHHHhCCccccceeecccccccCCCCC
Confidence 456899999999999999999999999999999999999999654 7899999999999999999999999999999999
Q ss_pred cChhHHHHHHHHHHhhhcCCcceecCCCCCCCCCCCcccccceecccccchhhccccccCCcccccc-cc-cccccCCcc
Q psy16067 357 SSPSFRCVFAEAFYRYKYGDRYFYEGPPATNPGAFTPGKQLTLTSLTSLASWRLQKVYHAPKEKHRF-SW-LTTVRGGPM 434 (1386)
Q Consensus 357 ~gpT~~cii~~qf~~l~~gDRFwyen~~~~~p~~ft~~~ql~~i~~~sl~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 434 (1386)
+||||+|||++||++||+|||||||| |+.||.+ |++||+++||+++||.|..+. .. ++. .+ ..++.|..+
T Consensus 379 ~Gptf~~ii~~qf~rLr~gDRf~yen-----~~~ft~~-ql~ei~~~sl~~iic~n~~~~-~i-q~~~~F~~~~~~n~~~ 450 (466)
T 1d2v_C 379 VGPLLACIIGTQFRKLRDGDRFWWEN-----EGVFSMQ-QRQALAQISLPRIICDNTGIT-TV-SKNNIFMSNSYPRDFV 450 (466)
T ss_dssp SCHHHHHHHHHHHHHHHHTCTTCTTS-----TTTSCHH-HHHHHTTCCHHHHHHHHSSCC-EE-ECSCTTTCCSTTTTEE
T ss_pred CCHHHHHHHHHHHHHHHhcCcccccC-----CCcccch-hhHHHHhCCHHHHHHhcCCCc-cc-CCCccccCCCCCCCCc
Confidence 99999999999999999999999994 7999997 999999999999999987432 22 222 22 233567777
Q ss_pred cccc
Q psy16067 435 TVTS 438 (1386)
Q Consensus 435 ~~~~ 438 (1386)
+|.+
T Consensus 451 ~C~~ 454 (466)
T 1d2v_C 451 NCST 454 (466)
T ss_dssp EGGG
T ss_pred Cccc
Confidence 7654
No 12
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ...
Probab=100.00 E-value=1.2e-33 Score=310.09 Aligned_cols=160 Identities=79% Similarity=1.241 Sum_probs=138.6
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecceeEEEeecCC
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKHND 1303 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV~V~Tk~~~ 1303 (1386)
+|+|.++.+.++|+|.|||+||+++||.++|++||.|+++.|++.++.+.+...||||||||||+|||||+|+|+||+++
T Consensus 69 ~I~I~~d~~~~~i~V~DnG~GMs~edl~~~l~~ia~S~~~~f~~~l~~~~~~~~iG~fG~G~~S~~~vad~v~V~Sr~~~ 148 (228)
T 3t0h_A 69 HINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHND 148 (228)
T ss_dssp CEEEEEETTTTEEEEEECSCCCCHHHHHTGGGSCHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGGTEEEEEEEEECTT
T ss_pred EEEEEEeCCeeEEEEEeCCCCCCHHHHHHHHHhhccccchhhhhhhcccCCcccCCCCChhHHHHhccCCEEEEEEecCC
Confidence 68888899999999999999999999999999999999999999887655678999999999999999999999999988
Q ss_pred CcceEEEeCCCCceEEecCCCCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcCCCCcceEEEEeeeeccccCccccc
Q psy16067 1304 DEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKEREKELSEDEEE 1383 (1386)
Q Consensus 1304 ~~~~~w~s~~~~~y~i~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~fi~~PI~l~~~~~~~~ev~~~~~~ 1383 (1386)
+.++.|++.+++.|+|.+.+....++||+|+|+||++..||++.++|+++|+|||+||+|||+|+.++++++||+++++|
T Consensus 149 ~~~~~w~~~g~~~~~v~~~~~~~~~~GT~I~v~Lk~~~~E~~e~~~i~~iv~~~a~~l~~Pi~~~~~~~~~~~~~~~~~~ 228 (228)
T 3t0h_A 149 DEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSDDEAE 228 (228)
T ss_dssp SCEEEEEECSTTEEEEEECCSSCCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHSTTCSSCEEECCC-------------
T ss_pred CCcEEEEEcCCceEEEeecCCCCCCCCcEEEEEECCchhhhhhHHHHHHHHHHHHhhCCCCeEEeecceeeccCCCccCC
Confidence 88999999999999999865556789999999999999999999999999999999999999999999999999866643
No 13
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-34 Score=350.19 Aligned_cols=155 Identities=68% Similarity=1.060 Sum_probs=141.4
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecceeEEEeecCC
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKHND 1303 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV~V~Tk~~~ 1303 (1386)
.|+|.+++++++|+|+|||||||++||+++|+|||+|||+.|+++++.+.+..+|||||||||||||||++|+|+||+++
T Consensus 63 ~I~I~~d~~~~~I~I~DnGiGMt~edl~~~l~tIA~Sgt~~f~~kl~~~~d~~~IGqFGvGFySaf~vadkV~V~Sk~~~ 142 (677)
T 2cg9_A 63 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSND 142 (677)
T ss_dssp CEEEEEEGGGTEEEEEECSCCCCHHHHHGGGSSSSSCTTHHHHSCCCSSCCCCCCCCTTCTTGGGGGTEEEEEEEEECTT
T ss_pred EEEEEEeCCCCEEEEEECCCCCCHHHHHHHHHhHhccccHHHHHhhhcccchhhcCCCCchhHHHhhcCcEEEEEEccCC
Confidence 79999999999999999999999999999999999999999998887666778999999999999999999999999998
Q ss_pred CcceEEEeCCCCceEEecCC-CCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcCCCCcceEEEEeeeeccccC
Q psy16067 1304 DEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKEREKELS 1378 (1386)
Q Consensus 1304 ~~~~~w~s~~~~~y~i~~~~-~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~fi~~PI~l~~~~~~~~ev~ 1378 (1386)
++++.|+++++++|+|.++. +...++||+|+||||++..+|+++++|+++|+|||+||+|||+++++++++++|+
T Consensus 143 ~~~~~W~s~g~~~~ti~~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~ 218 (677)
T 2cg9_A 143 DEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVP 218 (677)
T ss_dssp SCEEEEEECSSSEEEEEECCSSCCCSSEEEEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCCC--
T ss_pred CceEEEEEcCCceEEEeecCCCCCCCCCeEEEEEEcchhhccccHHHHHHHHHHHHhhCCCCeEEeeccccccCcC
Confidence 88999999999999999853 3467899999999999999999999999999999999999999986665544443
No 14
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A*
Probab=99.97 E-value=1.2e-31 Score=300.26 Aligned_cols=159 Identities=79% Similarity=1.242 Sum_probs=138.0
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecceeEEEeecCC
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKHND 1303 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV~V~Tk~~~ 1303 (1386)
.|+|.++.+..+|+|.|||+||+++||.++|++||.|+++.|+++++...+...||+|||||||+||||++|+|+||+.+
T Consensus 105 ~I~i~~d~~~~~I~I~DnG~GMs~edL~~~l~~ia~S~~~~f~~~l~~~~d~~~iG~fGiGf~S~f~va~~v~V~Sr~~~ 184 (264)
T 1yc1_A 105 HINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHND 184 (264)
T ss_dssp CEEEEEETTTTEEEEEECSCCCCHHHHHHHHHSCTTSCHHHHHHHHHTTCCGGGGGGGTCGGGGHHHHEEEEEEEEECTT
T ss_pred EEEEEECCCeeEEEEEECCcCCCHHHHHHHHHhhccccchhhhhhhccccchhhcCCCCCCccccccCCCEEEEEEecCC
Confidence 57777788889999999999999999999999999999999999887666778999999999999999999999999988
Q ss_pred CcceEEEeCCCCceEEecCCCCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcCCCCcceEEEEeeeeccccCcccc
Q psy16067 1304 DEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKEREKELSEDEE 1382 (1386)
Q Consensus 1304 ~~~~~w~s~~~~~y~i~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~fi~~PI~l~~~~~~~~ev~~~~~ 1382 (1386)
++++.|++.+++.|+|.+.+.....+||+|+|+||++..+|++.++|+++|++||.||+|||+++.++++++||+++|+
T Consensus 185 ~~~~~w~~~~~~~~~i~~~~~~~~~~GT~I~l~Lk~~~~e~~e~~~i~~lv~k~s~fi~~PI~~~~~~~~~~~~~~~~~ 263 (264)
T 1yc1_A 185 DEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSDDEA 263 (264)
T ss_dssp SCCEEEEECSTTEEEEEECCSSCCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHTTTCSSCEEECCCC-----------
T ss_pred CceEEEEEcCCceEEEeecCCCCCCCCeEEEEEECCchhhhhhHHHHHHHHHHHHhhCCCCEEEeeccccccccCCCCC
Confidence 7899999999999999976544568999999999999999999999999999999999999999999888888776554
No 15
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A*
Probab=99.97 E-value=2.6e-31 Score=293.59 Aligned_cols=150 Identities=51% Similarity=0.819 Sum_probs=123.0
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcC-----CccccccccccceeEEEeecceeEEE
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAG-----ADISMIGQFGVGFYSAYLVADKVTVT 1298 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~-----~~~~~IGqFGIGF~S~FmVadkV~V~ 1298 (1386)
.|+|.++++.++|+|+|||+||+++||.++|++||.||++.|+++++.. .+...||||||||||+||||++|+|+
T Consensus 69 ~I~i~~d~~~~~i~I~DnG~GMt~edl~~~l~~ia~Sg~~~f~~kl~~~~~~~~~d~~~iG~fGiG~~S~f~va~~v~V~ 148 (236)
T 2gqp_A 69 TVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVT 148 (236)
T ss_dssp CEEEEEETTTTEEEEEECSCCCCHHHHHHHHHCC---------------------CHHHHHHTTCGGGGGGGTEEEEEEE
T ss_pred EEEEEEcCCCCEEEEEECCcCCCHHHHHHHHhhhcccccHhHHHHhhccccccccchhhcCCCCcchhhHhhcCCEEEEE
Confidence 6888888888999999999999999999999999999999999887653 46679999999999999999999999
Q ss_pred eecCCCcceEEEeCCCCceEEecCC-CCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcCCCCcceEEEEeeeec
Q psy16067 1299 SKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKERE 1374 (1386)
Q Consensus 1299 Tk~~~~~~~~w~s~~~~~y~i~~~~-~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~fi~~PI~l~~~~~~~ 1374 (1386)
||+.+++++.|++++ |.|+|.+.. .....+||+|+|+||++..+|++.++|+++|++||+||+|||+|+++++++
T Consensus 149 Sr~~~~~~~~w~~~g-g~~~i~~~~~~~~~~~GT~I~l~Lk~~~~~~le~~~i~~lv~~~s~~i~~pI~~~~~~~~~ 224 (236)
T 2gqp_A 149 SKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKTGG 224 (236)
T ss_dssp EECTTSCCEEEEESS-SCEEEEECTTCSCSSSEEEEEEEECGGGGGGGCHHHHHHHHHHHHTTCSSCEEEEEECC--
T ss_pred EeCCCCceEEEEEeC-CEEEEEeccCCCCCCCCeEEEEEECCcchhhChHHHHHHHHHHHhhhCCCceEEeeeeccC
Confidence 999887899999999 999998764 234689999999999999999999999999999999999999999887654
No 16
>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A
Probab=99.96 E-value=2e-30 Score=283.76 Aligned_cols=156 Identities=68% Similarity=1.047 Sum_probs=139.5
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecceeEEEeecCC
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKHND 1303 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV~V~Tk~~~ 1303 (1386)
.|+|.++.+..+|+|.|||+||+++||.++|++||.||++.|+++++...+...||||||||||+||+|++|+|+||+.+
T Consensus 63 ~I~i~~~~~~~~i~I~DnG~GMs~edl~~~l~~ia~S~~~~f~~k~~~~~~~~~iG~fGiG~~s~~~~~~~v~v~S~~~~ 142 (220)
T 2wer_A 63 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSND 142 (220)
T ss_dssp CEEEEEEGGGTEEEEEECSCCCCHHHHHHHTTTSCCTTHHHHHHHHTTTCCGGGGGGGTCGGGGGGGTEEEEEEEEECTT
T ss_pred EEEEEECCCCCEEEEEEcCCCCCHHHHHHHHHhHhcccchhHHHHhhccCCcccCCccchhHHHhhhcCCeeEEEEecCC
Confidence 57888888888999999999999999999999999999999999887666778999999999999999999999999988
Q ss_pred CcceEEEeCCCCceEEecCC-CCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcCCCCcceEEEEeeeeccccCc
Q psy16067 1304 DEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKEREKELSE 1379 (1386)
Q Consensus 1304 ~~~~~w~s~~~~~y~i~~~~-~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~fi~~PI~l~~~~~~~~ev~~ 1379 (1386)
++++.|++.+++.|++.+.. .....+||+|+|+||++..+|++.++|+++|++|+.||+|||+++.++++++|+++
T Consensus 143 ~~~~~~~~~~~~~~~i~~~~~~~~~~~GT~I~l~Lk~~~~~~~e~~~i~~~v~~~a~~l~~PI~~~~~~~~~~~~~~ 219 (220)
T 2wer_A 143 DEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPI 219 (220)
T ss_dssp SCCEEEEECSSSEEEEEECSSSCCCSSEEEEEEEECTTCGGGGCHHHHHHHHHHHCTTCCSCEEECCCCCCC-----
T ss_pred CceeEEEeCCCCceEeecccCCCCCCCCeEEEEEECcchHHhCCHHHHHHHHHHHHhcCCCceEEEeccccccccCC
Confidence 78999999999999998753 33568999999999999999999999999999999999999999998877766543
No 17
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A
Probab=99.96 E-value=8.9e-31 Score=322.89 Aligned_cols=148 Identities=51% Similarity=0.834 Sum_probs=113.5
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcC-----CccccccccccceeEEEeecceeEEE
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAG-----ADISMIGQFGVGFYSAYLVADKVTVT 1298 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~-----~~~~~IGqFGIGF~S~FmVadkV~V~ 1298 (1386)
.|+|.+++++++|+|+|||||||++||+++|+|||+|||+.|+++++.+ .+..+||||||||||+||||++|+|+
T Consensus 82 ~I~I~~d~~~~~I~I~DnGiGMt~edl~~~l~tIA~SGtk~f~~kl~~~~~~~~~d~~~IGqFGvGfySaf~vAdkV~V~ 161 (666)
T 2o1u_A 82 TVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVT 161 (666)
T ss_dssp CEEEEEETTTTEEEEEECSCCCCHHHHHHHTTC-------------------------------CTTGGGGGTEEEEEEE
T ss_pred EEEEEEeCCCCEEEEEECCCCCCHHHHHHHHhhhcccccHHHHHHhhhcccccccchhhccCCCcHHHhHHHhcCEEEEE
Confidence 7999999999999999999999999999999999999999999988764 46789999999999999999999999
Q ss_pred eecCCCcceEEEeCCCCceEEecCC-CCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcCCCCcceEEEEeee
Q psy16067 1299 SKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKE 1372 (1386)
Q Consensus 1299 Tk~~~~~~~~w~s~~~~~y~i~~~~-~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~fi~~PI~l~~~~~ 1372 (1386)
||+++++++.|++++ |+|+|++.. ++..++||+|+||||++..||++.++|+++|+|||+||+|||+++.+++
T Consensus 162 Sr~~~~~~~~W~s~g-g~~ti~~~~~~~~~~~GT~I~L~Lk~d~~Efle~~~I~~ivkkys~fi~~PI~~~~~~~ 235 (666)
T 2o1u_A 162 SKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKT 235 (666)
T ss_dssp EECTTSCCEEEEESS-SCCEEEECTTCCSSSSEEEEEEEECTTTTTSSSTTHHHHHHHHHSTTCCSCEEEEECC-
T ss_pred EeeCCCceEEEEEeC-CeEEEEecccCCCCCCCeEEEEEEccchhhhccHHHHHHHHHHHHhhCCCceEEecccc
Confidence 999988899999999 999998764 3346899999999999999999999999999999999999999977543
No 18
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=99.96 E-value=1.1e-30 Score=319.49 Aligned_cols=232 Identities=18% Similarity=0.249 Sum_probs=198.7
Q ss_pred cccCcCCCCCCCCCCCCccCCCCCCcCCCCCCCcccCCcccccccccCCCCcccccccccCCCCCCCcchhhcccccCCc
Q psy16067 162 ADQCFASQAPQCNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVSSYRVSQVDASPLPNARVLSRVFLPDRN 241 (1386)
Q Consensus 162 ~~~C~~~~~~~c~~~~~yRt~DGscNNl~~P~~G~a~t~~~R~l~p~y~DGvs~pR~~s~~g~~LPnpRlVS~~L~~d~~ 241 (1386)
...|+ .+|.|+..++|||.||+|| +|+|+|++||.|+||+. |+.+ ..+..||+||+||+.++++..
T Consensus 90 ~~~~~--~p~~~~~~~~Yrs~dg~~N----------~t~~~R~lPp~y~dg~~-P~g~-~~~~~LP~pr~vs~~l~~r~~ 155 (587)
T 3nt1_A 90 SYLID--SPPTYNVHYGYKSWEAFSN----------LSYYTRALPPVADDCPT-PMGV-KGNKELPDSKEVLEKVLLRRE 155 (587)
T ss_dssp HTTSC--SSCCBBTTBSSCCHHHHHC----------TTBCBBSSCCCCTTCSB-TTBS-SSCSSCCCHHHHHHHHTBCSS
T ss_pred hccCC--CCCCCCCCCCccccccccC----------CCeeecccCCccccCCC-cccc-CCCCCCCCHHHHHHHHhcCCC
Confidence 34788 6789999999999999999 89999999999999987 8874 468899999999998887754
Q ss_pred -cCc--hhhhHHHHHHHHHhhcccCCCCCCCc------------------------------------------------
Q psy16067 242 -ISD--VHTRMYLEFSQLVAHDITLNPQESTA------------------------------------------------ 270 (1386)
Q Consensus 242 -~~~--~~s~m~~~~gQfI~HDi~lt~~~~~~------------------------------------------------ 270 (1386)
++. +.|.|+++|||+|+||++.|+...++
T Consensus 156 ~~p~~~~~s~l~~~fgQ~i~Hd~f~t~~~~~~~~~n~~t~~lD~S~IYGss~~~~~~LR~~~~G~Lk~~~~~g~~~pP~~ 235 (587)
T 3nt1_A 156 FIPDPQGSNMMFAFFAQHFTHQFFKTDHKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTV 235 (587)
T ss_dssp CCBCTTCBBHHHHHHHHHHHTTTCCBCTTTCTTBBSCTTCSCCCHHHHCSSHHHHHHHBCSSTTCBCCEEETTEEECCBH
T ss_pred cCCCCCCccHHHHHHHHHHhhhccccCCCCCCccccCccceeeeccCCCCCHHHHHhccCCCCCeeeeecCCCccCCCCC
Confidence 444 57999999999999999876432100
Q ss_pred --------------------------------------------------------------------------------
Q psy16067 271 -------------------------------------------------------------------------------- 270 (1386)
Q Consensus 271 -------------------------------------------------------------------------------- 270 (1386)
T Consensus 236 ~~~~~~~~~~~~~~~~~cf~~GD~R~ne~pgL~alhtlflREHNriA~~L~~~nP~W~DE~LFQeAR~Iv~A~~Q~Ity~ 315 (587)
T 3nt1_A 236 KDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIE 315 (587)
T ss_dssp HHHCCCCCCCTTSCGGGCBCCSSTTTTSCHHHHHHHHHHHHHHHHHHHHHHC-CTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccccCCCCCcccccccCCcccccChHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhhheeeeHH
Confidence
Q ss_pred ---------------ccc-----------------------------------------------------------c--
Q psy16067 271 ---------------VPT-----------------------------------------------------------R-- 274 (1386)
Q Consensus 271 ---------------~~~-----------------------------------------------------------~-- 274 (1386)
.|. +
T Consensus 316 EyLP~ilG~~~~~~~dp~~~~~~~~~~~~~is~eF~~a~~~Hslip~~~~~~~~~~~l~~~ff~p~~~~~~gid~llrgl 395 (587)
T 3nt1_A 316 DYVQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQEYSFKQFLYNNSILLEHGLTQFVESF 395 (587)
T ss_dssp THHHHHHCCSSCCCCCGGGGTTSCCCSCCCCBHHHHHHTCCGGGSCSSEEETTEEECHHHHTTCTHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCcchhcccCcccccCCCCCcCchHHHHHHHHHhccccCCcccccCCCcccHHHHhcCccccchhhHHHHHHHH
Confidence 000 0
Q ss_pred --CCCC---------CcccchHHHHHHhhcccCCCchHHHHHHhCCCCCCCcchhcccCCHHHHHHHHHhhCCCCccccc
Q psy16067 275 --GLRG---------EFGDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTRLSQVYRGVNDIDYY 343 (1386)
Q Consensus 275 --~~~~---------~~g~DL~a~~IqrgRdhGip~Y~~~R~~c~l~~~~sf~dl~~~~~~~~~~~l~~lY~~~~dvDL~ 343 (1386)
+..+ ..+.||+++|||||||||||+||+||++|||++++||+||++ +++++++|++||+||||||||
T Consensus 396 ~~q~a~~~~~~~n~~~~~~DL~alnIqRGRDhGlp~YN~~R~~cgL~~~~tf~dl~~--~~~~~~~L~~lY~~~ddIDL~ 473 (587)
T 3nt1_A 396 TRQIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTG--EKEMAAELKALYSDIDVMELY 473 (587)
T ss_dssp HHSBCBCSSSSSCBCGGGHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHS--SSHHHHHHHHHHSSGGGCCHH
T ss_pred HHhhhhcccccccCchHHHHHHHHHHHHHHhhCCCcHHHHHHHcCCCCCCCHHHhCC--CHHHHHHHHHHhCCHhheeee
Confidence 0011 134799999999999999999999999999999999999997 899999999999999999999
Q ss_pred ccccccccCCCcccChhHHHHHHHH------HHhhhcCCcceecCCCCCCCCCCCcccccceecccccchhhccccccCC
Q psy16067 344 IGGLLESVIRGTLSSPSFRCVFAEA------FYRYKYGDRYFYEGPPATNPGAFTPGKQLTLTSLTSLASWRLQKVYHAP 417 (1386)
Q Consensus 344 ~G~l~E~~~~G~~~gpT~~cii~~q------f~~l~~gDRFwyen~~~~~p~~ft~~~ql~~i~~~sl~~~~~~~~~~~~ 417 (1386)
||+++|++++|++|||||+|| +.| |.++|+|||||+ |+.||.+|.+++|+++||+++||.|+...+
T Consensus 474 vGglaE~~~pG~~vGpTf~ci-~~qf~l~~~~~~~r~gDrfw~-------~~~Ft~~qgl~~I~~~sL~~lic~N~~~~p 545 (587)
T 3nt1_A 474 PALLVEKPRPDAIFGETMVEL-GAPFSLKGLMGNPICSPQYWK-------PSTFGGEVGFKIINTASIQSLICNNVKGCP 545 (587)
T ss_dssp HHHHHSCCSTTCSSCHHHHHH-HHHHHHHHHHTSGGGSTTTSS-------GGGGTSHHHHHHHHTCCHHHHHHHHSTTCC
T ss_pred cccccccCCCCccHHHHHHHH-HHHHHHHHHhcCcccCCcccC-------cCccChHHHHHHHHHCCHHHHHHhCCCCCC
Confidence 999999999999999999999 666 489999999994 588999866999999999999999987644
No 19
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A
Probab=99.95 E-value=2.6e-29 Score=305.78 Aligned_cols=144 Identities=42% Similarity=0.773 Sum_probs=129.5
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcC--CccccccccccceeEEEeecceeEEEeec
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAG--ADISMIGQFGVGFYSAYLVADKVTVTSKH 1301 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~--~~~~~IGqFGIGF~S~FmVadkV~V~Tk~ 1301 (1386)
.|+|.+++++++|+|+|||+|||++||+++|++||+||++.|+++++.+ .+..+||||||||||+||||++|+|+||+
T Consensus 64 ~I~I~~d~~~~~I~I~DnGiGMt~edl~~~l~tiA~Sg~~~f~e~l~~~~~~~~~~iG~fGvGfyS~f~VadkV~V~Sr~ 143 (559)
T 1y4s_A 64 RVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRA 143 (559)
T ss_dssp CEEEEEETTTTEEEEEECSSCCCHHHHHHHHSCCSCCCCCCTTCC--------CCCCSSCCCSGGGHHHHEEEEEEEEEC
T ss_pred EEEEEEeCCCcEEEEEECCCCCCHHHHHHHHhhhcccccHHHHHHhhccccccccccCCCCcchhhhhhccCeEEEEEcC
Confidence 7999999999999999999999999999999999999999998777542 46689999999999999999999999999
Q ss_pred CC---CcceEEEeCCCCceEEecCCCCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcCCCCcceEEEE
Q psy16067 1302 ND---DEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLV 1369 (1386)
Q Consensus 1302 ~~---~~~~~w~s~~~~~y~i~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~fi~~PI~l~~ 1369 (1386)
++ +.++.|++.+++.|+|++.+ ..++||+|+||||++..||++.++|+++|+|||+||+|||++..
T Consensus 144 ~~~~~~~~~~w~s~g~~~~~i~~~~--~~~~GT~I~L~Lk~d~~Efle~~~I~~iv~kys~fi~~PI~~~~ 212 (559)
T 1y4s_A 144 AGEKPENGVFWESAGEGEYTVADIT--KEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEK 212 (559)
T ss_dssp SSSCGGGEEEEEECSSSEEEEEEEC--CCSCEEEEEEEECTTCGGGSCHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred CCCCCCeeEEEEEeCCCeeEEeECC--CCCCCeEEEEEEcchhhhcchHHHHHHHHHHHhccCCCceEEee
Confidence 86 56899999999999998643 44799999999999999999999999999999999999999964
No 20
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=99.95 E-value=2.1e-29 Score=307.85 Aligned_cols=126 Identities=18% Similarity=0.253 Sum_probs=118.0
Q ss_pred cccchHHHHHHhhcccCCCchHHHHHHhCCCCCCCcchhcccCCHHHHHHHHHhhCCCCcccccccccccccCCCcccCh
Q psy16067 280 FGDDLAARDIQRGRDYGLRPYVDYRELCGLSTVRSFGDLNDFMDSEQVTRLSQVYRGVNDIDYYIGGLLESVIRGTLSSP 359 (1386)
Q Consensus 280 ~g~DL~a~~IqrgRdhGip~Y~~~R~~c~l~~~~sf~dl~~~~~~~~~~~l~~lY~~~~dvDL~~G~l~E~~~~G~~~gp 359 (1386)
++.||++++||||||||||+||+||++|||++++||+||++ +++++++|++||++|||||||||+|+|++++|++|||
T Consensus 412 ~~~dL~alnIqRgRDhGlp~YN~~R~~~gL~~~~tf~dl~~--d~~~~~~L~~lY~~~ddiDL~vG~laE~~~~G~~~Gp 489 (553)
T 1q4g_A 412 HILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTG--EKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGE 489 (553)
T ss_dssp TTHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHS--SSHHHHHHHHHHSSGGGCCHHHHHHHSCBCTTCSSBH
T ss_pred HHHHHHHHHHHHHHhhCCCcHHHHHHHcCCCCCCCHHHhcC--CHHHHHHHHHHhcChhhccccccccccccCCCCCccH
Confidence 45799999999999999999999999999999999999998 8999999999999999999999999999999999999
Q ss_pred hHHHHHHH-HHHhhh---cCCcceecCCCCCCCCCCCcccccceecc-cccchhhccccc
Q psy16067 360 SFRCVFAE-AFYRYK---YGDRYFYEGPPATNPGAFTPGKQLTLTSL-TSLASWRLQKVY 414 (1386)
Q Consensus 360 T~~cii~~-qf~~l~---~gDRFwyen~~~~~p~~ft~~~ql~~i~~-~sl~~~~~~~~~ 414 (1386)
||+|||+. ||++|+ +||||||. |+.||++ |+.+|++ +||+++||.|..
T Consensus 490 t~~~ii~~~~~~~l~~~~~~d~~~~~------~~~ft~~-ql~ei~~~~sla~iic~n~~ 542 (553)
T 1q4g_A 490 SMIEMGAPFSLKGLLGNPICSPEYWK------ASTFGGE-VGFNLVKTATLKKLVCLNTK 542 (553)
T ss_dssp HHHHHHHHHHHHHHHTSGGGSTTTCS------GGGGTSH-HHHHHHHTCCHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHhhCcCCCccccC------CCCcCHH-HHHHHHHhCCHHHHHHHcCC
Confidence 99999998 699996 69999984 6899998 7888866 699999999875
No 21
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A
Probab=99.95 E-value=6.4e-29 Score=305.63 Aligned_cols=144 Identities=42% Similarity=0.773 Sum_probs=122.2
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcC--CccccccccccceeEEEeecceeEEEeec
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAG--ADISMIGQFGVGFYSAYLVADKVTVTSKH 1301 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~--~~~~~IGqFGIGF~S~FmVadkV~V~Tk~ 1301 (1386)
.|+|.+++++++|+|+|||+|||++||+++|++||+||++.|+++++.+ .+..+||||||||||+|||||+|+|+||+
T Consensus 64 ~I~I~~d~~~~~I~I~DnGiGMt~edl~~~l~tiA~Sg~~~f~~~l~~~~~~~~~~iG~fGvGfyS~f~VadkV~V~Sr~ 143 (624)
T 2ioq_A 64 RVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRA 143 (624)
T ss_dssp CEEEEEETTTTEEEEEECSCCCCHHHHHHHHHHHCC---------------CCTTHHHHHHHHHHHHHHHEEEEEEEEEC
T ss_pred EEEEEEeCCCcEEEEEECCCCCCHHHHHHHHHhhcccccHHHHHHhcccccccccccCCCCccHHHHHhcCCeEEEEECC
Confidence 6999999999999999999999999999999999999999999888642 46789999999999999999999999999
Q ss_pred CC---CcceEEEeCCCCceEEecCCCCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcCCCCcceEEEE
Q psy16067 1302 ND---DEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLV 1369 (1386)
Q Consensus 1302 ~~---~~~~~w~s~~~~~y~i~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~fi~~PI~l~~ 1369 (1386)
++ +.++.|++++++.|+|++.+ ..++||+|+||||++..||++.++|+++|+|||+||+|||++..
T Consensus 144 ~~~~~~~~~~w~s~g~~~~~i~~~~--~~~~GT~I~L~Lk~d~~Efl~~~~i~~ivkkys~fi~~PI~~~~ 212 (624)
T 2ioq_A 144 AGEKPENGVFWESAGEGEYTVADIT--KEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEK 212 (624)
T ss_dssp TTSCGGGEEEEEECSSSCCEEEEEC--CSSSEEEEEEEECTTCGGGGCHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred CCCCCCeeEEEEEeCCCeEEEEECC--CCCCCeEEEEEEcchhhhcchHHHHHHHHHHHhccCCCceEEee
Confidence 86 56899999999999998642 44799999999999999999999999999999999999999964
No 22
>2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli}
Probab=99.93 E-value=3.4e-26 Score=252.66 Aligned_cols=144 Identities=42% Similarity=0.774 Sum_probs=128.6
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhc--CCccccccccccceeEEEeecceeEEEeec
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQA--GADISMIGQFGVGFYSAYLVADKVTVTSKH 1301 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~--~~~~~~IGqFGIGF~S~FmVadkV~V~Tk~ 1301 (1386)
.|+|.++.+..+|+|+|||+||+++||.++|++||.|+++.|++.++. ..+...||+|||||||+||+|++|+|+||+
T Consensus 84 ~I~i~~~~~~~~i~I~DnG~GMs~edl~~~~~~ia~S~~~~f~~~l~~~~~~~~~~iG~fGiG~~S~~~~~~~v~V~Sr~ 163 (235)
T 2ior_A 84 RVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRA 163 (235)
T ss_dssp CEEEEEETTTTEEEEEECSSCCCHHHHHHHHTTCCCTTHHHHHHHCCSCHHHHHHHHTTCCCCGGGGGGTEEEEEEEEEC
T ss_pred EEEEEEcCCceEEEEEECCCCCCHHHHHHHHHHHccccccchhhhhccccccccccCCCCChhHHHHHhCcCeEEEEEec
Confidence 688888888899999999999999999999999999999999876542 123468999999999999999999999999
Q ss_pred CC---CcceEEEeCCCCceEEecCCCCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcCCCCcceEEEE
Q psy16067 1302 ND---DEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLV 1369 (1386)
Q Consensus 1302 ~~---~~~~~w~s~~~~~y~i~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~fi~~PI~l~~ 1369 (1386)
.+ ..++.|++.+++.|+|.+.. ...+||+|+|+||++..+|++.++|+++|++|+.||++||+|+.
T Consensus 164 ~~~~~~~~~~w~~~~~~~~~i~~~~--~~~~GT~V~v~Lk~~~~~~~e~~~i~~lv~~ya~~l~~PI~~~~ 232 (235)
T 2ior_A 164 AGEKPENGVFWESAGEGEYTVADIT--KEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEK 232 (235)
T ss_dssp TTSCGGGEEEEEECSSSEEEEEEEC--CCSCEEEEEEEECTTCGGGGCHHHHHHHHHHHTTSCCSCEEEC-
T ss_pred CCCCCceeEEEEecCCCcEEEeeCC--CCCCCEEEEEEEcCchhhhCCHHHHHHHHHHHhccCCCCeEecc
Confidence 75 45899999999999998632 45799999999999999999999999999999999999999963
No 23
>1d2v_A Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_A* 1d5l_A* 1d7w_A* 1dnu_A* 1dnw_A* 4dl1_A* 3zs1_A* 3f9p_A* 1mhl_A* 1myp_A* 3zs0_A*
Probab=99.91 E-value=1.1e-25 Score=219.06 Aligned_cols=94 Identities=33% Similarity=0.560 Sum_probs=83.7
Q ss_pred CCCCCCccCCCCCCcCCCCCCCcccCCcccccccccCCCCccccccc----ccCCCCCCCcchhhcccccCCc---cC-c
Q psy16067 173 CNRRTKYRTLDGTCNNLRRPWWGAVDTAHVRLMRPYYEDGVSSYRVS----QVDASPLPNARVLSRVFLPDRN---IS-D 244 (1386)
Q Consensus 173 c~~~~~yRt~DGscNNl~~P~~G~a~t~~~R~l~p~y~DGvs~pR~~----s~~g~~LPnpRlVS~~L~~d~~---~~-~ 244 (1386)
|+..++|||+||+|||+++|.||+|+|||+|++||.|+||+++||.| +.+|.+||+||+||..|+.... .+ .
T Consensus 1 C~~~~~yRt~DG~cNNl~~P~~G~a~t~f~R~lpp~Y~DG~~~p~~~~~~~~~~g~~lP~pR~VS~~l~~~~~~~~~~~~ 80 (104)
T 1d2v_A 1 CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQ 80 (104)
T ss_dssp CCSCCSSCCSSCTTSSSSSTTTTCSSEECBCSSCCCCTTSSSCCTTSSTTCCBTTBCCCCHHHHHHHHTCCCGGGCCEEE
T ss_pred CCCCCCccCCCCCccCCCCCccCcCCCccccccCcccccCcccccccccccccCCCcCCCHHHHHHHHHhcccccCCCCC
Confidence 77779999999999999999999999999999999999999999943 4578999999999999988654 23 3
Q ss_pred hhhhHHHHHHHHHhhcccCCCC
Q psy16067 245 VHTRMYLEFSQLVAHDITLNPQ 266 (1386)
Q Consensus 245 ~~s~m~~~~gQfI~HDi~lt~~ 266 (1386)
..+.|+|+|||||+|||++++.
T Consensus 81 ~~t~~~~~wgQfi~HDl~~t~~ 102 (104)
T 1d2v_A 81 ERSLMFMQWGQLLDHDLDFTPE 102 (104)
T ss_dssp EEEHHHHHHHHHHHHHHCCCCC
T ss_pred chHHHHHHHHHHHHhhHhhcCC
Confidence 5699999999999999998764
No 24
>1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A*
Probab=99.07 E-value=7e-11 Score=136.83 Aligned_cols=126 Identities=24% Similarity=0.358 Sum_probs=93.7
Q ss_pred CceeeecCCCC-CEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecceeEEEeec
Q psy16067 1223 GQDPIIPNKEE-KTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKH 1301 (1386)
Q Consensus 1223 G~I~I~~d~~~-~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV~V~Tk~ 1301 (1386)
..|+|.++.++ ..|+|+|||+||+++++...+..++.|....+ +.+. ....+|++|+|++|+++|| +|+|+||+
T Consensus 42 ~~I~I~i~~~~~~~i~V~DnG~Gi~~~~l~~~~~~~~tsK~~~~-~d~~---~~~~~G~~G~gl~si~~vs-~l~v~s~~ 116 (333)
T 1b63_A 42 TRIDIDIERGGAKLIRIRDNGCGIKKDELALALARHATSKIASL-DDLE---AIISLGFRGEALASISSVS-RLTLTSRT 116 (333)
T ss_dssp SEEEEEEEGGGTSEEEEEECSCCCCGGGHHHHHSTTCCSSCCSH-HHHH---TCCSSCCSSCHHHHHHTTS-EEEEEEEC
T ss_pred CeEEEEEEeCCceEEEEEEcCCCcCHHHHHHhhhcccccCcccc-chhh---hccccCccccchhhhhcCC-cEEEEEec
Confidence 36777776543 68999999999999999999999887743222 1121 2346899999999999999 89999999
Q ss_pred CCC-cceEEEeCCCC-ceEEecCCCCCCCCCcEEEEE------------eccchhhcCCHHHHHHHHHHhcC
Q psy16067 1302 NDD-EQYIWESSAGG-SFTIKPDNSEPLGRGTKIVLH------------MKEDQAEYIEEKKIKEIVKKHSQ 1359 (1386)
Q Consensus 1302 ~~~-~~~~w~s~~~~-~y~i~~~~~~~~~~GT~I~L~------------Lk~d~~e~l~~~~l~~lv~kys~ 1359 (1386)
.++ ..|.|..+++. ..++.+. ..++||+|+++ ||....|| .+|++++++|+-
T Consensus 117 ~~~~~~~~~~~~g~~~~~~~~~~---~~~~GT~V~v~~Lf~n~P~r~kflk~~~~e~---~~i~~~~~~~al 182 (333)
T 1b63_A 117 AEQQEAWQAYAEGRDMNVTVKPA---AHPVGTTLEVLDLFYNTPARRKFLRTEKTEF---NHIDEIIRRIAL 182 (333)
T ss_dssp TTCSSEEEEEEETTTTEEEEEEE---CCCSEEEEEEESTTTTCHHHHHTCCCHHHHH---HHHHHHHHHHHH
T ss_pred CCCceEEEEEEcCCcceEeeecc---cCCCCCEEEEecccccchhhhhhhccHHHHH---HHHHHHHHHHhc
Confidence 764 46777666655 4555442 24699999998 44433333 789999999986
No 25
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A
Probab=98.91 E-value=2.4e-10 Score=135.19 Aligned_cols=77 Identities=52% Similarity=0.723 Sum_probs=45.1
Q ss_pred CHHHHHHhhhcCCCchhHHHHHHHHhhccccCCCCCCCCcc---------ccccccCCCCC--C---chhhhccCCCCcc
Q psy16067 1 IVETLRQKADADKNDKAVKDLVNLLFETSLLSSGFTLEDPQ---------VELTLSGRPDR--S---PERLIAAVPIRQT 66 (1386)
Q Consensus 1 i~~~l~~~~~~d~~dk~vkdl~~ll~~tall~sgf~l~~~~---------~~~~l~~~~d~--~---~~~~~~~~p~~e~ 66 (1386)
||+.|++++++|++|+.+||+++|||+||+|++||+|+||. +.+||+||+|+ + ++++++++||+|+
T Consensus 352 li~~L~~~~~~d~~~~~~~~~~~lLyd~AlL~~G~~l~DP~~f~~ri~~ll~~~L~id~~~~~~~~~~~~~~~~~~~~~~ 431 (448)
T 3q6m_A 352 IIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLEG 431 (448)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHTTC------------------------
T ss_pred HHHHHHHHhhcccchhHHHHHHHHHHHhHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCccccccccccccccCCCCCCCC
Confidence 68999999999999999999999999999999999999997 77899999987 1 2246788999998
Q ss_pred cccccchhhhhh
Q psy16067 67 CQHEDNRVYERQ 78 (1386)
Q Consensus 67 ~~~~~~~~~~~~ 78 (1386)
. ++.+||||-.
T Consensus 432 ~-~~~~~~~~~~ 442 (448)
T 3q6m_A 432 D-DDTSRMEEVD 442 (448)
T ss_dssp ------------
T ss_pred C-cchhhhhhhc
Confidence 8 6668998853
No 26
>1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A*
Probab=98.89 E-value=7.5e-10 Score=129.69 Aligned_cols=136 Identities=15% Similarity=0.167 Sum_probs=91.9
Q ss_pred CCCCceeeecCCC-CCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecceeEEE
Q psy16067 1220 PGFGQDPIIPNKE-EKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVT 1298 (1386)
Q Consensus 1220 ~g~G~I~I~~d~~-~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV~V~ 1298 (1386)
.|-+.|.|.+..+ ...|+|.|||.||+++++...+..++.|..+. ........-.|.+|+|++|+++|| +|+|+
T Consensus 49 A~a~~I~I~i~~~~~~~I~V~DnG~Gi~~~~l~~~f~~~~tsK~~~----~~dl~~i~s~G~rG~gl~si~~vs-~v~v~ 123 (365)
T 1h7s_A 49 AGATNIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQE----FADLTQVETFGFRGEALSSLCALS-DVTIS 123 (365)
T ss_dssp TTCSEEEEEEEGGGTSEEEEEECSCCCCGGGSGGGGC--------------CCTTCSEEESSSSSHHHHHHHHS-EEEEE
T ss_pred CCCCEEEEEEEeCCcEEEEEEECCCCcCHHHHHHHhhhcccccccc----ccchhcccccCCCCchhhhhhhhc-cEEEE
Confidence 3445788877543 46999999999999999999988887763221 111111234799999999999999 99999
Q ss_pred eecCCC-cceEEEeCCCCceEEecCCCCCCCCCcEEEEE-eccc----hhhcC-----CHHHHHHHHHHhcCCCC
Q psy16067 1299 SKHNDD-EQYIWESSAGGSFTIKPDNSEPLGRGTKIVLH-MKED----QAEYI-----EEKKIKEIVKKHSQFIG 1362 (1386)
Q Consensus 1299 Tk~~~~-~~~~w~s~~~~~y~i~~~~~~~~~~GT~I~L~-Lk~d----~~e~l-----~~~~l~~lv~kys~fi~ 1362 (1386)
||+.++ .+|.|+.+++|.+..... ...++||+|+++ |-.. .++|+ +..+++++|++|+-+-+
T Consensus 124 t~~~~~~~~~~~~~~~~G~~~~~~~--~~~~~GT~V~v~~LF~n~P~R~k~flk~~~~e~~~i~~~v~~~al~~p 196 (365)
T 1h7s_A 124 TCHASAKVGTRLMFDHNGKIIQKTP--YPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISA 196 (365)
T ss_dssp EECTTCSSCEEEEECTTSCEEEEEE--CCCCSEEEEEEESTTTTSHHHHHHHHHTHHHHHHHHHHHHHHHHHHCT
T ss_pred EccCCCcceEEEEEcCCCceEeecc--cCCCCCcEEEEeecccccchhhhhhccchHHHHHHHHHhhhhhhhcCC
Confidence 998764 489999887777654332 234799999997 2111 01233 35789999999987543
No 27
>3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae}
Probab=98.85 E-value=1.2e-09 Score=127.85 Aligned_cols=128 Identities=19% Similarity=0.175 Sum_probs=90.9
Q ss_pred CceeeecC-CCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecceeEEEeec
Q psy16067 1223 GQDPIIPN-KEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKH 1301 (1386)
Q Consensus 1223 G~I~I~~d-~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV~V~Tk~ 1301 (1386)
..|+|.+. .+...|+|+|||.||+++++...+...+.|..+.+ +.-....-.|..|+|++|.++|| +|+|+||+
T Consensus 43 ~~I~I~i~~~~~~~i~V~DnG~Gi~~~~l~~~~~~~~tsK~~~~----~Dl~~i~t~GfrGeaL~Si~avS-~l~V~sr~ 117 (367)
T 3h4l_A 43 NQIEIIFKDYGLESIECSDNGDGIDPSNYEFLALKHYTSKIAKF----QDVAKVQTLGFRGEALSSLCGIA-KLSVITTT 117 (367)
T ss_dssp SEEEEEEETTTTSEEEEEECSCCCCGGGTTTTTCCEEC-------------CCCCEEEETTHHHHHHHHSS-EEEEEEES
T ss_pred CEEEEEEEeCCEEEEEEEECCCCcChhHhccceeccccCcCCch----hhhhhhhccCccchHHHHhhccC-EEEEEEEE
Confidence 46777774 33469999999999999998865544444432222 11112335688899999999999 79999998
Q ss_pred CCCcceEEEeCCCCceEEecCCCCCCCCCcEEEE-------------EeccchhhcCCHHHHHHHHHHhcCC
Q psy16067 1302 NDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVL-------------HMKEDQAEYIEEKKIKEIVKKHSQF 1360 (1386)
Q Consensus 1302 ~~~~~~~w~s~~~~~y~i~~~~~~~~~~GT~I~L-------------~Lk~d~~e~l~~~~l~~lv~kys~f 1360 (1386)
.++.++.|+.+++|.+..... ...++||+|++ ++|....|| .+|+++|++|+-.
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~~--~~~~~GTtV~v~~LF~n~P~R~k~flk~~~~e~---~~i~~~l~~~Al~ 184 (367)
T 3h4l_A 118 SPPKADKLEYDMVGHITSKTT--TSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQF---TKCLTVIQGYAII 184 (367)
T ss_dssp STTCEEEEEECTTCCEEEEEE--ECCSSEEEEEEESTTTTCHHHHHHHHTTHHHHH---HHHHHHHHHHHHH
T ss_pred CCCCEEEEEEcCCCcEEeecc--ccCCCCeEEEEchhhccCchhhhhhccchHHHH---HHHHHHHHHHHhh
Confidence 776789999987777654321 23479999999 567666555 6999999999754
No 28
>3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens}
Probab=98.51 E-value=1.2e-08 Score=118.52 Aligned_cols=127 Identities=33% Similarity=0.360 Sum_probs=84.3
Q ss_pred CceeeecCCCC-CEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecceeEEEeec
Q psy16067 1223 GQDPIIPNKEE-KTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKH 1301 (1386)
Q Consensus 1223 G~I~I~~d~~~-~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV~V~Tk~ 1301 (1386)
+.|.|.++.++ ..|+|+|||.||+++++...+-..+.|.-+.+ +.+ ....-.|.+|+|++|...|| +|+|+||.
T Consensus 46 ~~I~I~i~~~~~~~I~V~DnG~GI~~~~l~~~~~~~~tsK~~~~-~dl---~~i~s~GfrGeaL~Si~avs-~l~v~sr~ 120 (348)
T 3na3_A 46 TSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSF-EDL---ASISTYGFRGEALASISHVA-HVTITTKT 120 (348)
T ss_dssp SEEEEEEEGGGTSEEEEEECSCCCCGGGGGTTTSTTCCSSCCCC-------------CCTTCHHHHHHHSS-EEEEEEEC
T ss_pred CEEEEEEEeCCEEEEEEEECCcCcChHHhhhhhccccccccCcc-hhh---hccccCCcCChHHHHhhccc-EEEEEEEE
Confidence 46777776544 46999999999999998765444333322211 111 11245699999999999999 89999998
Q ss_pred CCC-cceEEEeCCCCce-EEecCCCCCCCCCcEEEEE------------eccchhhcCCHHHHHHHHHHhcCC
Q psy16067 1302 NDD-EQYIWESSAGGSF-TIKPDNSEPLGRGTKIVLH------------MKEDQAEYIEEKKIKEIVKKHSQF 1360 (1386)
Q Consensus 1302 ~~~-~~~~w~s~~~~~y-~i~~~~~~~~~~GT~I~L~------------Lk~d~~e~l~~~~l~~lv~kys~f 1360 (1386)
.++ .+|.|+..++... .+.+. ..++||+|++. ||....|| .+++++|++|+-.
T Consensus 121 ~~~~~~~~~~~~~G~~~~~~~~~---~~~~GTtV~v~~LF~n~P~R~k~lk~~~~e~---~~i~~~l~~~Al~ 187 (348)
T 3na3_A 121 ADGKCAYRASYSDGKLKAPPKPC---AGNQGTQITVEDLFYNIATRRKALKNPSEEY---GKILEVVGRYSVH 187 (348)
T ss_dssp TTCSSEEEEEEETTEESSCCEEE---CCCSEEEEEEESTTTTCHHHHHTSCCHHHHH---HHHHHHHHHHHHH
T ss_pred CCCCceEEEEEeCCEEeeeeeEe---cCCCCcEEEECcccccCchhhhhccccHHHH---HHHHHHHHHHHhh
Confidence 764 5788887653211 12221 34799999994 56555443 7899999999753
No 29
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major}
Probab=98.27 E-value=1.4e-07 Score=112.28 Aligned_cols=52 Identities=60% Similarity=0.885 Sum_probs=43.6
Q ss_pred CHHHHHHhhhcCCCchhHHHHHHHHhhccccCCCCCCCCcc---------ccccccCCCCC
Q psy16067 1 IVETLRQKADADKNDKAVKDLVNLLFETSLLSSGFTLEDPQ---------VELTLSGRPDR 52 (1386)
Q Consensus 1 i~~~l~~~~~~d~~dk~vkdl~~ll~~tall~sgf~l~~~~---------~~~~l~~~~d~ 52 (1386)
||+.|++++++|++|+.+||++.+||+||||++||+++||. +.++|+||+|+
T Consensus 368 li~~L~~~~~~d~~~~~~~~l~~lLyd~AlL~~G~~ledp~~f~~ri~~ll~~~l~~~~~~ 428 (444)
T 3hjc_A 368 IIKELRRRVGADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAERINRMIKLGLSLDEEE 428 (444)
T ss_dssp HHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHTCCCSCHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHhhcCcchHHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcCCCccc
Confidence 58999999999999999999999999999999999999998 66789999885
No 30
>1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A*
Probab=97.83 E-value=6.3e-06 Score=99.59 Aligned_cols=124 Identities=16% Similarity=0.260 Sum_probs=83.1
Q ss_pred ceeeecCC-----CCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecce----
Q psy16067 1224 QDPIIPNK-----EEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADK---- 1294 (1386)
Q Consensus 1224 ~I~I~~d~-----~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadk---- 1294 (1386)
.|.|.+.. +.-.|+|+|||+||+++++...+...-.+++. ......|.+|+|++++..+++.
T Consensus 56 ~I~I~i~~~~~~~~~~~I~V~DnG~GI~~e~l~~iF~~f~~tsk~---------~~~~~~gg~GLGL~iv~~l~~~~gG~ 126 (471)
T 1mu5_A 56 NIKITIDLIDDARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSSKY---------VNRQTRGMYGLGVKAAVLYSQMHQDK 126 (471)
T ss_dssp EEEEEEEEEETTTTEEEEEEECCSCCCCGGGHHHHHHCCCCC-CC---------CCSCCSCSCTTTHHHHHHHHHHHCCC
T ss_pred EEEEEEEECCCcCcEEEEEEEECCCCCCHHHHHHHhccccccccc---------ccccCCCCceeeHHHHHHHHHHhCCC
Confidence 45665543 33479999999999999988766554222111 1123458899999999999997
Q ss_pred -eEEEeecCCCc-ceEEEeC------CCCceEEecCCCCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhc
Q psy16067 1295 -VTVTSKHNDDE-QYIWESS------AGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHS 1358 (1386)
Q Consensus 1295 -V~V~Tk~~~~~-~~~w~s~------~~~~y~i~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys 1358 (1386)
|.|.|+..++. .+.|... ++..+...+.......+||+|++.++.+..++ ..+|.+++++|+
T Consensus 127 ~i~v~S~~~~g~~~~~~~Lpl~~~~~~g~~~~~~~~~~~~~~~GT~V~v~l~~~~~e~--~~~I~~~l~~~a 196 (471)
T 1mu5_A 127 PIEIETSPVNSKRIYTFKLKIDINKNEPIIVERGSVENTRGFHGTSVAISIPGDWPKA--KSRIYEYIKRTY 196 (471)
T ss_dssp CEEEEEECTTCSEEEEEEEEECTTTCCEEEEEEEEEECCTTCCEEEEEEEEECCHHHH--HHHHHHHHHHHH
T ss_pred ceeEEEecCCCceEEEEEEeccccccCCcccccccccCCCCCCCEEEEEEEcCCcchH--HHHHHHHHHHHH
Confidence 99999887654 5555521 22233333221123479999999998765443 268999999987
No 31
>1kij_A DNA gyrase subunit B; topoisomerase, gyrase B-coumarin complex, isomerase; HET: DNA NOV; 2.30A {Thermus thermophilus} SCOP: d.14.1.3 d.122.1.2
Probab=97.71 E-value=1e-05 Score=95.58 Aligned_cols=140 Identities=19% Similarity=0.231 Sum_probs=88.1
Q ss_pred CceeeecCCCCCEEEEEeCCCccCHHHHHh-------hccceeecchHHHHHHHhcCCccccccccccceeEEEeeccee
Q psy16067 1223 GQDPIIPNKEEKTLTIIDSGIGMTKADLVN-------NLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKV 1295 (1386)
Q Consensus 1223 G~I~I~~d~~~~~L~I~DnGiGMt~~dl~~-------~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV 1295 (1386)
+.|+|.++.+ +.|+|+|||.||..+++.. .+.+....|.+ | .........|..|+|+.++..+++++
T Consensus 54 ~~I~V~i~~~-~~i~V~DnG~GIp~~~~~~~~~~~~e~if~~~~~~~k-f----~~~~~~~s~G~~G~Gls~v~als~~~ 127 (390)
T 1kij_A 54 TEILVRLNED-GSLTVEDNGRGIPVDLMPEEGKPAVEVIYNTLHSGGK-F----EQGAYKVSGGLHGVGASVVNALSEWT 127 (390)
T ss_dssp CEEEEEECTT-SCEEEEECSSCCCCSEETTTTEEHHHHHHHSSCEESG-G----GGSSCCCCSCSSTTSHHHHHHTEEEE
T ss_pred CEEEEEEEcC-CEEEEEEcCCCCCHHHhhhccccchhhheeeeeeccc-c----cCccccccCCCCCcceeeecccccce
Confidence 4788888776 5999999999999987643 12232233333 2 11111124589999999999999999
Q ss_pred EEEeecCCCcceEEEeCCC-CceEEecCCCCC-CCCCcEEEEEeccchhhc----CCHHHHHHHHHHhcCC-CCcceEEE
Q psy16067 1296 TVTSKHNDDEQYIWESSAG-GSFTIKPDNSEP-LGRGTKIVLHMKEDQAEY----IEEKKIKEIVKKHSQF-IGYPIKLL 1368 (1386)
Q Consensus 1296 ~V~Tk~~~~~~~~w~s~~~-~~y~i~~~~~~~-~~~GT~I~L~Lk~d~~e~----l~~~~l~~lv~kys~f-i~~PI~l~ 1368 (1386)
+|+|+..+ ..|..+-..+ ....+.+..... ..+||+|++. +|...| ++.+.|.+.++.++-. -..-|.+.
T Consensus 128 ~v~t~~~g-~~~~~~~~~G~~~~~~~~~~~~~~~~~GT~V~f~--Pd~~~F~~~~~~~~~l~~rl~~~A~lnpgv~i~l~ 204 (390)
T 1kij_A 128 VVEVFREG-KHHRIAFSRGEVTEPLRVVGEAPRGKTGTRVTFK--PDPEIFGNLRFDPSKIRARLREVAYLVAGLKLVFQ 204 (390)
T ss_dssp EEEEEETT-EEEEEEEETTEEEEEEEEEEECGGGCCEEEEEEE--ECHHHHTTCCCCHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred EEEEecCC-cEEEEEEcCCcccccceeeccccCCCCCcEEEEE--EChHHhCCccccHHHHHHHHHHhcCcCCCcEEEEE
Confidence 99999754 4444333332 122333211111 4689999987 444434 5678899999988732 23556665
Q ss_pred Eee
Q psy16067 1369 VEK 1371 (1386)
Q Consensus 1369 ~~~ 1371 (1386)
.++
T Consensus 205 d~~ 207 (390)
T 1kij_A 205 DRQ 207 (390)
T ss_dssp EGG
T ss_pred eCC
Confidence 544
No 32
>2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae}
Probab=97.63 E-value=1.7e-05 Score=97.02 Aligned_cols=134 Identities=15% Similarity=0.209 Sum_probs=85.9
Q ss_pred ceeeecCC-----CCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecc-----
Q psy16067 1224 QDPIIPNK-----EEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAD----- 1293 (1386)
Q Consensus 1224 ~I~I~~d~-----~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVad----- 1293 (1386)
.|.|.+.. +.-.|+|+|||+||+++++...+...-.+++. ......|.+|+|++++..+++
T Consensus 55 ~I~I~i~~~~~~~~~~~I~V~DnG~GI~~e~l~~iF~~f~~tsk~---------~~~~~~gg~GLGLsiv~~l~~~~gG~ 125 (530)
T 2zbk_B 55 NIKITIDLIDDARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSSKY---------VNRQTRGMYGLGVKAAVLYSQMHQDK 125 (530)
T ss_dssp CCEEEEEEEETTTTEEEEEEECCSCCCCGGGSHHHHTSCCCSCCC---------CCSCCSCSSSSHHHHHHHHHHHHCCC
T ss_pred EEEEEEEECCCcCceEEEEEEECCCCCCHHHHHHHhccccccCCc---------ccccCCCCccchHHHHHHHHHHhCCC
Confidence 45555433 33489999999999999888766554222211 011346889999999999998
Q ss_pred eeEEEeecCCCc-ceEEEe----C--CCCceEEecCCCCCCCCCcEEEEEeccchhhcCCHHHHHHHHHHhcC-CCCcce
Q psy16067 1294 KVTVTSKHNDDE-QYIWES----S--AGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQ-FIGYPI 1365 (1386)
Q Consensus 1294 kV~V~Tk~~~~~-~~~w~s----~--~~~~y~i~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~l~~lv~kys~-fi~~PI 1365 (1386)
+|.|.|+..++. .+.+.. . ++......+.......+||+|++.++.+..++ ...+.+++++|+- +-..-|
T Consensus 126 ~I~V~S~~~~g~~~~~~~Lpl~~~~~~g~~~~~~~~~~~~~~~GT~V~v~l~~~~~e~--~~~i~~~l~~~Al~~p~v~~ 203 (530)
T 2zbk_B 126 PIEIETSPVNSKRIYTFKLKIDINKNEPIIVERGSVENTRGFHGTSVAISIPGDWPKA--KSRIYEYIKRTYIITPYAEF 203 (530)
T ss_dssp CEEEEEECTTCSEEEEEEEEEETTTTEEEEEEEEEEECCSSCCEEEEEEEEECCHHHH--HHHHHHHHHHHHHHCTTCCE
T ss_pred ceEEEEecCCCeEEEEEEEEecccccCCccccccccCCCCCCCCcEEEEEeccchhhH--HHHHHHHHHHHHHHCCCcEE
Confidence 799999876554 444442 1 11222332221122468999999998765544 3689999999864 233444
Q ss_pred EEE
Q psy16067 1366 KLL 1368 (1386)
Q Consensus 1366 ~l~ 1368 (1386)
.+.
T Consensus 204 ~l~ 206 (530)
T 2zbk_B 204 IFK 206 (530)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 33
>3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A*
Probab=97.53 E-value=2.3e-05 Score=84.70 Aligned_cols=141 Identities=18% Similarity=0.229 Sum_probs=76.6
Q ss_pred CceeeecCCCCCEEEEEeCCCccCHHHHH-------hhccceeecchHHHHHHHhcCCccccccccccceeEEEeeccee
Q psy16067 1223 GQDPIIPNKEEKTLTIIDSGIGMTKADLV-------NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKV 1295 (1386)
Q Consensus 1223 G~I~I~~d~~~~~L~I~DnGiGMt~~dl~-------~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV 1295 (1386)
..|+|.++.+ +.|+|+|||.||..+++. ..+.+.-..++| |-... ... -.|.-|+|.-|+-.||+++
T Consensus 39 ~~I~V~i~~~-g~i~V~DnG~GIp~~~~~~~~~~~~e~i~~~~hatsK-~~~~~---~~~-s~GfrGeglssinalS~~l 112 (201)
T 3fv5_A 39 KRVDVILHAD-QSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGK-FSNKN---YQF-SGGLHGVGISVVNALSKRV 112 (201)
T ss_dssp SEEEEEECTT-SCEEEEECSSCCCCSBCTTCSSBHHHHHHHCC--------------------------CHHHHHTEEEE
T ss_pred cEEEEEEeCC-CEEEEEECCCCcCcccccccCcchhheeeeeeccccC-cCCCc---ccc-cCcccceecchhhcccceE
Confidence 4789988764 599999999999998731 121222333333 32211 112 3689999999999999999
Q ss_pred EEEeecCCCcceEEEeCCCCce--EEecCCCC-CCCCCcEEEEEeccch--hhcCCHHHHHHHHHHhcCCC-CcceEEEE
Q psy16067 1296 TVTSKHNDDEQYIWESSAGGSF--TIKPDNSE-PLGRGTKIVLHMKEDQ--AEYIEEKKIKEIVKKHSQFI-GYPIKLLV 1369 (1386)
Q Consensus 1296 ~V~Tk~~~~~~~~w~s~~~~~y--~i~~~~~~-~~~~GT~I~L~Lk~d~--~e~l~~~~l~~lv~kys~fi-~~PI~l~~ 1369 (1386)
+|+|+..+ +.|..+-. +|.. .+...... ..+.||+|++...... ..-++...|.+++++|+-.- ..-|.|..
T Consensus 113 ~v~t~~~g-~~~~~~~~-~G~~~~~~~~~g~~~~~~~GT~V~f~Pdr~~F~~~~~e~~~i~~~l~~lA~l~pgv~~~l~~ 190 (201)
T 3fv5_A 113 EVNVRRDG-QVYNIAFE-NGEKVQDLQVVGTCGKRNTGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKD 190 (201)
T ss_dssp EEEEEETT-EEEEEEEE-TTEEEEEEEEEEECCTTCCEEEEEEEECGGGSSCCCCCHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred EEEEEecC-ceEEEEEe-CCEEcccceecccCCCCCCCeEEEEEECHHHcCCCccCHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 99999754 33332222 2332 22211111 1469999999643321 11367789999999997332 34566654
Q ss_pred ee
Q psy16067 1370 EK 1371 (1386)
Q Consensus 1370 ~~ 1371 (1386)
++
T Consensus 191 ~r 192 (201)
T 3fv5_A 191 EI 192 (201)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 34
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1
Probab=97.39 E-value=2.1e-05 Score=79.07 Aligned_cols=40 Identities=28% Similarity=0.492 Sum_probs=34.5
Q ss_pred CHHHHHHhhhcCCCchhHHHHHHHHhhccccCCCCCCCCccccc
Q psy16067 1 IVETLRQKADADKNDKAVKDLVNLLFETSLLSSGFTLEDPQVEL 44 (1386)
Q Consensus 1 i~~~l~~~~~~d~~dk~vkdl~~ll~~tall~sgf~l~~~~~~~ 44 (1386)
||+.|+++ ++|+.+||++++|||||+|++||+++||..++
T Consensus 78 lIk~L~~~----~~~~~~k~l~~lLyd~AlL~~G~~leDp~~F~ 117 (126)
T 1sf8_A 78 LVKRAADT----EDEAKFSEWVELLLDQALLAERGTLEDPNLFI 117 (126)
T ss_dssp HHHHHHHC----CSHHHHHHHHHHHHHHHHHHHHSCCSSHHHHH
T ss_pred HHHHHHHh----cChHHHHHHHHHHHHHHHHHCCCCcccHHHHH
Confidence 57788653 57889999999999999999999999998554
No 35
>2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei}
Probab=97.11 E-value=8.1e-05 Score=92.53 Aligned_cols=135 Identities=21% Similarity=0.277 Sum_probs=85.2
Q ss_pred ceeeecCCCC---CEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecce-----e
Q psy16067 1224 QDPIIPNKEE---KTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADK-----V 1295 (1386)
Q Consensus 1224 ~I~I~~d~~~---~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadk-----V 1295 (1386)
.|+|.+..++ ..|+|+|||.||+.+++..-+...-. +++ |. ..+ .--|..|+|+.++..+++. +
T Consensus 61 ~I~V~i~~~~~~~~~I~V~DnG~GIp~e~l~~iF~~~~a-tsk-f~-----~~~-~s~Gg~GlGLsiv~~ls~~~gG~~I 132 (621)
T 2q2e_B 61 DILVQVERTGPDYVTVIIEDNGPGIVREQIPKVFAKLLY-GSR-FH-----ALK-QSRGQQGIGISAAVLYAQMTAGRHT 132 (621)
T ss_dssp EEEECCEEETTTEEEEEEECCSCCCCGGGHHHHHSCCCC-C---CC-----CCC--CCSSSSHHHHHHHHHHHHHTCCCC
T ss_pred EEEEEEEECCCcEEEEEEEECCCCCCHHHHHHHhhhhcc-CCc-cc-----ccc-ccCCCceechhhhhHHHHHhCCCce
Confidence 6777776554 47999999999999998876544322 211 10 011 1238899999999999998 5
Q ss_pred EEEeecCCC-cceEEEe-----CCCCceEEecCCCCCCCCCcEEEEEeccchhhcCC--HHHHHHHHHHhcCCC-CcceE
Q psy16067 1296 TVTSKHNDD-EQYIWES-----SAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIE--EKKIKEIVKKHSQFI-GYPIK 1366 (1386)
Q Consensus 1296 ~V~Tk~~~~-~~~~w~s-----~~~~~y~i~~~~~~~~~~GT~I~L~Lk~d~~e~l~--~~~l~~lv~kys~fi-~~PI~ 1366 (1386)
+|.|+..++ ..+.+.. .+.+.............+||+|++.++. +|.+ ...|.+++++|+-.- ..-|.
T Consensus 133 ~V~S~~~gg~~g~~~~~~lp~~~g~~~~~~~~~~~~~~~~GT~V~~~f~~---~~~~~~~~~I~~~L~~lAllnpgv~I~ 209 (621)
T 2q2e_B 133 KILSKTSPTAPAHYYELMINTSTNEPDILVDEVRDWFRPHGTQIELEMRA---AYVKGRRQSIYEYLKATAIVNPHARIT 209 (621)
T ss_dssp EEEEECSSSSCEEEEECCCCSSSCSCCCCCEEECCCSCSSCCCEEEECSC---CCCCCSSSSSHHHHHHHHHHCCSCEEE
T ss_pred eEEeeccCCccceEEEEecchhcccccccccccccCCCCCCCEEEEEecC---ccchHHHHHHHHHHHHHHhhCCCCEEE
Confidence 999987654 4566664 3333331111112234699999999874 3444 367888888875332 34455
Q ss_pred EEE
Q psy16067 1367 LLV 1369 (1386)
Q Consensus 1367 l~~ 1369 (1386)
+..
T Consensus 210 L~d 212 (621)
T 2q2e_B 210 LID 212 (621)
T ss_dssp ECC
T ss_pred EEE
Confidence 543
No 36
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A
Probab=96.98 E-value=0.00015 Score=90.43 Aligned_cols=44 Identities=34% Similarity=0.585 Sum_probs=41.2
Q ss_pred CHHHHHHhhhcCCCchhHHHHHHHHhhccccCCCCCCCCccccc
Q psy16067 1 IVETLRQKADADKNDKAVKDLVNLLFETSLLSSGFTLEDPQVEL 44 (1386)
Q Consensus 1 i~~~l~~~~~~d~~dk~vkdl~~ll~~tall~sgf~l~~~~~~~ 44 (1386)
||+.|++++++|++|+.+||+++|||+||||++||+|+||..++
T Consensus 605 li~~l~~~~~~~~~~~~~~~~~~~l~d~All~~G~~~~dp~~f~ 648 (666)
T 2o1u_A 605 LIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYG 648 (666)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHTCCCSCHHHHH
T ss_pred HHHHHHHhhhcccchHHHHHHHHHHHHHHHHhCCCCcccHHHHH
Confidence 68999999999999999999999999999999999999998554
No 37
>1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2
Probab=96.68 E-value=0.00064 Score=80.36 Aligned_cols=139 Identities=19% Similarity=0.255 Sum_probs=85.0
Q ss_pred CceeeecCCCCCEEEEEeCCCccCHHH--------HHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecce
Q psy16067 1223 GQDPIIPNKEEKTLTIIDSGIGMTKAD--------LVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADK 1294 (1386)
Q Consensus 1223 G~I~I~~d~~~~~L~I~DnGiGMt~~d--------l~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadk 1294 (1386)
..|.|+++.+ +.|+|+|||.||..++ +.--|+.+-. |+| | ....-.---|.-|+|.-|+=.|+++
T Consensus 53 ~~I~V~i~~~-g~I~V~DnG~GIp~~~~~~~~~~~~e~v~~~lha-gsK-f----~~~~~~~sgGl~GvGls~vnalS~~ 125 (390)
T 1s16_A 53 KRVDVILHAD-QSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHA-GGK-F----SNKNYQFSGGLHGVGISVVNALSKR 125 (390)
T ss_dssp SEEEEEECTT-SCEEEEECSSCCCCSBCTTTCSBHHHHHHHCTTE-ESC-S----SSSSCSSCSCCSSCHHHHHHHTEEE
T ss_pred CEEEEEEecC-CEEEEEECCCCcCcccccccCcchhhheeeeecc-cCC-c----CCCcccccCCccccchHHHHHhhcc
Confidence 5799999876 4999999999999876 3333333211 222 1 1111112458899999999999999
Q ss_pred eEEEeecCCCcceEEEeCCCC-ceEEecCC-CCCCCCCcEEEEEeccchhhc----CCHHHHHHHHHHhcCCC-CcceEE
Q psy16067 1295 VTVTSKHNDDEQYIWESSAGG-SFTIKPDN-SEPLGRGTKIVLHMKEDQAEY----IEEKKIKEIVKKHSQFI-GYPIKL 1367 (1386)
Q Consensus 1295 V~V~Tk~~~~~~~~w~s~~~~-~y~i~~~~-~~~~~~GT~I~L~Lk~d~~e~----l~~~~l~~lv~kys~fi-~~PI~l 1367 (1386)
++|+|+..+ ..|..+-..+. .-.+.... ......||+|+... |..-| ++.+.|.+.++.++-.- ..-|.+
T Consensus 126 l~v~~~r~g-~~~~~~~~~G~~~~~~~~~g~~~~~~~GT~V~f~P--d~~~F~~~~~e~~~l~~rl~~lA~lnpgv~i~l 202 (390)
T 1s16_A 126 VEVNVRRDG-QVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWP--DETFFDSPRFSVSRLTHVLKAKAVLCPGVEITF 202 (390)
T ss_dssp EEEEEEETT-EEEEEEEETTEEEEEEEEEEECCTTCCEEEEEEEE--CGGGSSCCSCCHHHHHHHHHHHHHHSTTCEEEE
T ss_pred cEEEEEECC-cEEEEEEeCCcccccceecccccCCCCceEEEEEE--CccccCcccccHHHHHHHHHHHHhcCCCcEEEE
Confidence 999998743 43443333321 11122111 11125899999873 43333 57889999999986432 355666
Q ss_pred EEee
Q psy16067 1368 LVEK 1371 (1386)
Q Consensus 1368 ~~~~ 1371 (1386)
..++
T Consensus 203 ~d~~ 206 (390)
T 1s16_A 203 KDEI 206 (390)
T ss_dssp EETT
T ss_pred EeCC
Confidence 5544
No 38
>4duh_A DNA gyrase subunit B; structure-based drug design, antibacterial, DNA gyrase B, GY isomerase-isomerase inhibitor complex; HET: DNA RLI; 1.50A {Escherichia coli} PDB: 1aj6_A* 1kzn_A* 3g7e_A*
Probab=96.26 E-value=0.0012 Score=72.24 Aligned_cols=139 Identities=16% Similarity=0.188 Sum_probs=78.3
Q ss_pred CceeeecCCCCCEEEEEeCCCccCHHHHH-------hhccceeecchHHHHHHHhcCCccccccccccceeEEEeeccee
Q psy16067 1223 GQDPIIPNKEEKTLTIIDSGIGMTKADLV-------NNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKV 1295 (1386)
Q Consensus 1223 G~I~I~~d~~~~~L~I~DnGiGMt~~dl~-------~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV 1295 (1386)
..|+|+++.+ +.|+|+|||.||..++.. ....+.-..|+| | +...-..--|.-|+|.=++=.+++++
T Consensus 57 ~~I~V~i~~~-g~i~V~DnGrGIp~~~~~~~~~~~~e~i~t~lhag~K-f----d~~~yk~SgGlhGvG~svvNAlS~~l 130 (220)
T 4duh_A 57 KEIIVTIHAD-NSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGK-F----DDNSYKVSGGLHGVGVSVVNALSQKL 130 (220)
T ss_dssp CEEEEEECTT-SCEEEEECSSCCCCSEETTTTEEHHHHHHHSTTCSSC-C----CTTC--------CCCHHHHHHTEEEE
T ss_pred CEEEEEEeCC-CcEEEEECCcCcccccccccCcchhhheeeecccCCC-c----CCCccccccCccceecchhcccccce
Confidence 4799999875 589999999999986421 111111122222 1 00111124588999999999999999
Q ss_pred EEEeecCCCcceEEEeCCCCceEEecCC--CCCCCCCcEEEEEeccchhh---cCCHHHHHHHHHHhcCCCC--cceEEE
Q psy16067 1296 TVTSKHNDDEQYIWESSAGGSFTIKPDN--SEPLGRGTKIVLHMKEDQAE---YIEEKKIKEIVKKHSQFIG--YPIKLL 1368 (1386)
Q Consensus 1296 ~V~Tk~~~~~~~~w~s~~~~~y~i~~~~--~~~~~~GT~I~L~Lk~d~~e---~l~~~~l~~lv~kys~fi~--~PI~l~ 1368 (1386)
+|+++..+ +.|..+-.. |. .+.+.. +...+.||+|+......-.. -++.+.|.+.++.++ |+. .-|.++
T Consensus 131 ~v~v~r~g-~~~~~~f~~-G~-~~~~l~~~g~~~~~GT~V~F~Pd~~~F~~~~~~~~~~l~~rlrelA-~ln~gv~i~l~ 206 (220)
T 4duh_A 131 ELVIQREG-KIHRQIYEH-GV-PQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELS-FLNSGVSIRLR 206 (220)
T ss_dssp EEEEEETT-EEEEEEEET-TE-ESSSCEEEEECSCCEEEEEEEECTTTCCSSCSCCHHHHHHHHHHHH-HHCTTSEEEEE
T ss_pred EEEEEECC-EEEEEEecC-Cc-CcCCceeccccCCCCcEEEEEECHHHhCCcccCCHHHHHHHHHHHH-hcCCCCEEEEE
Confidence 99998755 333322222 21 111110 12246999999875433211 256688999999986 554 455555
Q ss_pred Eee
Q psy16067 1369 VEK 1371 (1386)
Q Consensus 1369 ~~~ 1371 (1386)
.++
T Consensus 207 der 209 (220)
T 4duh_A 207 DKR 209 (220)
T ss_dssp ETT
T ss_pred ccC
Confidence 444
No 39
>4emv_A DNA topoisomerase IV, B subunit; protein-inhibitor complex, ATP binding, structure-based drug antimicrobial, virtual screen; HET: DNA 0R9; 1.70A {Streptococcus pneumoniae GA47373} PDB: 4em7_A*
Probab=96.26 E-value=0.0019 Score=70.92 Aligned_cols=139 Identities=21% Similarity=0.248 Sum_probs=82.5
Q ss_pred CceeeecCCCCCEEEEEeCCCccCHHH------HHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecceeE
Q psy16067 1223 GQDPIIPNKEEKTLTIIDSGIGMTKAD------LVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVT 1296 (1386)
Q Consensus 1223 G~I~I~~d~~~~~L~I~DnGiGMt~~d------l~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV~ 1296 (1386)
..|.|.++.+ +.++|+|||.||..++ ......+.-..|.| |-.. .-..--|.-|+|.=++=.++++++
T Consensus 62 ~~I~V~i~~~-g~i~V~DnG~GIp~~~h~~~~~~~e~v~t~lhag~K-fd~~----~yk~SgGlhGvG~svvNALS~~l~ 135 (226)
T 4emv_A 62 DRIDVTINKD-GSLTVQDHGRGMPTGMHAMGIPTVEVIFTILHAGGK-FGQG----GYKTSGGLHGVGSSVVNALSSWLE 135 (226)
T ss_dssp SEEEEEECTT-SCEEEEECSSCCCCSBCGGGCBHHHHHHHCBC-------------------CGGGCCHHHHHHTEEEEE
T ss_pred cEEEEEEeCC-CeEEEEEcCCCccccccccCceehheeEEeecccCc-cCcc----ceEeccccccccchhhhhcccceE
Confidence 4789988875 5899999999999876 12222233333333 3211 112245999999999999999999
Q ss_pred EEeecCCCcceEEEeCCC----CceE-EecCCCCCCCCCcEEEEEeccch--hhcCCHHHHHHHHHHhcCCC--CcceEE
Q psy16067 1297 VTSKHNDDEQYIWESSAG----GSFT-IKPDNSEPLGRGTKIVLHMKEDQ--AEYIEEKKIKEIVKKHSQFI--GYPIKL 1367 (1386)
Q Consensus 1297 V~Tk~~~~~~~~w~s~~~----~~y~-i~~~~~~~~~~GT~I~L~Lk~d~--~e~l~~~~l~~lv~kys~fi--~~PI~l 1367 (1386)
|+++..+ +.|..+-..+ +... +.+. ...+.||+|+......- ..-++.+.|.+.++.++ |+ ..-|.+
T Consensus 136 v~v~r~g-~~~~q~f~~Gg~~~~~l~~ig~~--~~~~~GT~V~F~PD~~iF~~~~~~~~~l~~rlrelA-~ln~gv~i~l 211 (226)
T 4emv_A 136 VEITRDG-AVYKQRFENGGKPVTTLKKIGTA--LKSKTGTKVTFMPDATIFSTTDFKYNTISERLNESA-FLLKNVTLSL 211 (226)
T ss_dssp EEEEETT-EEEEEEEETTTEESSCSEEEEEC--CTTCCEEEEEEEECTTTCSCCCCCHHHHHHHHHHHH-HHHCSCEEEE
T ss_pred EEEEeCC-cEEEEEECCCCEEcCCceEeccc--CCCCCCeEEEEEECHHHcCCCCcCHHHHHHHHHHHh-hcCCCCEEEE
Confidence 9998755 3343332222 1111 2211 11469999998754432 11267889999999986 55 455666
Q ss_pred EEee
Q psy16067 1368 LVEK 1371 (1386)
Q Consensus 1368 ~~~~ 1371 (1386)
..++
T Consensus 212 ~der 215 (226)
T 4emv_A 212 TDKR 215 (226)
T ss_dssp EETT
T ss_pred EecC
Confidence 5544
No 40
>1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A*
Probab=96.22 E-value=0.0022 Score=76.05 Aligned_cols=143 Identities=10% Similarity=0.035 Sum_probs=81.6
Q ss_pred CceeeecCCCCCEEEEEeCCCccCHHH--------HHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecce
Q psy16067 1223 GQDPIIPNKEEKTLTIIDSGIGMTKAD--------LVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADK 1294 (1386)
Q Consensus 1223 G~I~I~~d~~~~~L~I~DnGiGMt~~d--------l~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadk 1294 (1386)
..|+|+++.+++.|+|+|||.||..++ +.--|++.- .|.| |-. ..-. ---|.-|+|.=++=.++.+
T Consensus 75 ~~I~V~i~~~~~~I~V~DnGrGIPv~~h~~~~~~~~e~v~t~lh-agsK-f~~---~~yk-vSgGlhGvGlsvVnAlS~~ 148 (400)
T 1zxm_A 75 SCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLL-TSSN-YDD---DEKK-VTGGRNGYGAKLCNIFSTK 148 (400)
T ss_dssp CEEEEEEETTTTEEEEEEESSCCCCSEETTTTEEHHHHHHHSSS-EESC-CCG---GGCC-CCSCCSSCHHHHHHHTEEE
T ss_pred ceEEEEEECCCCEEEEEECCCcccCccccccCccchhheeeeec-ccCC-CCC---Cccc-ccCCccccceeeeEEeccc
Confidence 489999988778999999999999865 111222221 2222 100 0011 1459999999999999999
Q ss_pred eEEEeecC-CCcceEEEeCCCCce-EEecCCCCCCCCCcEEEEEeccchhh--cCCHHH---HHHHHHHhcCCC-CcceE
Q psy16067 1295 VTVTSKHN-DDEQYIWESSAGGSF-TIKPDNSEPLGRGTKIVLHMKEDQAE--YIEEKK---IKEIVKKHSQFI-GYPIK 1366 (1386)
Q Consensus 1295 V~V~Tk~~-~~~~~~w~s~~~~~y-~i~~~~~~~~~~GT~I~L~Lk~d~~e--~l~~~~---l~~lv~kys~fi-~~PI~ 1366 (1386)
++|+++.. ++..|..+-..+..- .+.+........||+|+......-.+ -++.+. |.+.++.++-.- ..-|.
T Consensus 149 l~v~v~~~~~g~~~~~~~~~G~~~~~~~~ig~~~~~~GT~V~F~Pd~~iF~~~ef~~~~~~~l~~rlrelA~lnpgv~i~ 228 (400)
T 1zxm_A 149 FTVETASREYKKMFKQTWMDNMGRAGEMELKPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGSTKDVKVF 228 (400)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEECCCEEEECCSCCEEEEEEEECGGGGTCSSCCHHHHHHHHHHHHHHHHHSSSCEEE
T ss_pred eEEEEecCCCCcEEEEEEccCccccCcceeccCCCCCccEEEEEEChHHhCceeecHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 99999874 333444333332111 11100011135899999885443211 134555 667777764221 35566
Q ss_pred EEEee
Q psy16067 1367 LLVEK 1371 (1386)
Q Consensus 1367 l~~~~ 1371 (1386)
+..++
T Consensus 229 l~der 233 (400)
T 1zxm_A 229 LNGNK 233 (400)
T ss_dssp ETTEE
T ss_pred EecCC
Confidence 65443
No 41
>1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2
Probab=96.13 E-value=0.0023 Score=75.73 Aligned_cols=139 Identities=15% Similarity=0.154 Sum_probs=83.4
Q ss_pred CceeeecCCCCCEEEEEeCCCccCHHHH--------HhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecce
Q psy16067 1223 GQDPIIPNKEEKTLTIIDSGIGMTKADL--------VNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADK 1294 (1386)
Q Consensus 1223 G~I~I~~d~~~~~L~I~DnGiGMt~~dl--------~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadk 1294 (1386)
..|+|+++.+ +.|+|+|||.||..++. .--|+..-. |+| | +...-.---|.-|+|.-|+=.++++
T Consensus 56 ~~I~V~i~~~-g~I~V~DnG~GIp~~~~~~~~~~~~elv~~~lha-gsK-f----~~~~~~vSgGl~GvGls~vnalS~~ 128 (391)
T 1ei1_A 56 KEIIVTIHAD-NSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHA-GGK-F----DDNSYKVSGGLHGVGVSVVNALSQK 128 (391)
T ss_dssp CEEEEEECTT-SCEEEEECSSCCCCSBCTTTSSBHHHHHHHSTTE-ESC-S----SSSSCSSCSCCSSCHHHHHHHTEEE
T ss_pred CEEEEEEeCC-CEEEEEECCCCcccCcccccCcchHHHhheeccc-cCC-c----CCCcccccCCccccchHHHHHhcCe
Confidence 4799999886 49999999999998762 112222211 212 1 1111112458899999999999999
Q ss_pred eEEEeecCCCcceEEEeCCCCceEEecCC--CCCCCCCcEEEEEeccchh---hcCCHHHHHHHHHHhcCCC-CcceEEE
Q psy16067 1295 VTVTSKHNDDEQYIWESSAGGSFTIKPDN--SEPLGRGTKIVLHMKEDQA---EYIEEKKIKEIVKKHSQFI-GYPIKLL 1368 (1386)
Q Consensus 1295 V~V~Tk~~~~~~~~w~s~~~~~y~i~~~~--~~~~~~GT~I~L~Lk~d~~---e~l~~~~l~~lv~kys~fi-~~PI~l~ 1368 (1386)
++|+|+..+ ..|..+-.. |. .+.+.. +.....||+|+........ .-++.+.|.+.++.++-.- ..-|.+.
T Consensus 129 l~v~~~r~g-~~~~~~~~~-G~-~~~~l~~~~~~~~~GT~V~f~Pd~~~F~~~~~~e~~~l~~rlr~lA~lnpgv~i~l~ 205 (391)
T 1ei1_A 129 LELVIQREG-KIHRQIYEH-GV-PQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLDSGVSIRLR 205 (391)
T ss_dssp EEEEEEETT-EEEEEEEET-TE-ESSCCEEEEECSCCEEEEEEEECTTTCCSCCSCCHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred EEEEEEeCC-cEEEEEEcC-Cc-ccccceeccCcCCCccEEEEEEChhhhCCccccCHHHHHHHHHHhcccCCCcEEEEE
Confidence 999998754 334333322 21 111110 1123699999987433221 2246788999999886432 4556665
Q ss_pred Eee
Q psy16067 1369 VEK 1371 (1386)
Q Consensus 1369 ~~~ 1371 (1386)
.++
T Consensus 206 d~~ 208 (391)
T 1ei1_A 206 DKR 208 (391)
T ss_dssp ETT
T ss_pred cCC
Confidence 544
No 42
>3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, B-subunit binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus}
Probab=96.02 E-value=0.0079 Score=70.62 Aligned_cols=133 Identities=9% Similarity=0.165 Sum_probs=77.9
Q ss_pred CceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecceeEEEeecC
Q psy16067 1223 GQDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKHN 1302 (1386)
Q Consensus 1223 G~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV~V~Tk~~ 1302 (1386)
.+|+|+++.++ .|+|+|||.||.. |++-.| ..|+| |-. .+......+-| |.-|+=.|+.+++|+|+..
T Consensus 52 ~~I~V~i~~~g-~I~V~DnGrGIp~-e~v~~l----hagsK-f~~-~~~~~~y~vsG----Gls~vnalSs~l~v~t~r~ 119 (369)
T 3cwv_A 52 RDVVLEVGGDG-SIALFCTSRTVTA-ENLVRV----ATGAG-FLG-RPPGDGWGWDS----MLVVSLALSSRYQVDIWAD 119 (369)
T ss_dssp SEEEEEECTTS-CEEEEEEESSCCH-HHHHHH----HTTTT-GGG-SSCCCSTTTTS----SHHHHHHTEEEEEEEEEET
T ss_pred CEEEEEEeCCC-EEEEEECCCCcCH-hHeeee----ecCCC-cCC-CcccccccccC----HHHHHHHhhceEEEEEEEC
Confidence 47999998764 9999999999998 554211 22322 100 00001122334 6666666788999999875
Q ss_pred CCcceEEEeCCCCce-----EEecCC--CCCCCCCcEEEEEeccchhhc----CCHHHHHHHHHHhcCCC-CcceEEEEe
Q psy16067 1303 DDEQYIWESSAGGSF-----TIKPDN--SEPLGRGTKIVLHMKEDQAEY----IEEKKIKEIVKKHSQFI-GYPIKLLVE 1370 (1386)
Q Consensus 1303 ~~~~~~w~s~~~~~y-----~i~~~~--~~~~~~GT~I~L~Lk~d~~e~----l~~~~l~~lv~kys~fi-~~PI~l~~~ 1370 (1386)
+ +.|..+-.. |.- .+.+.. +.....||+|+.. +|..-| .+...|.+.++.++-.- ..-|.+..+
T Consensus 120 g-~~~~~~~~~-G~~~~~~~~~~~l~~~g~~~~~GT~V~f~--Pd~~~F~~~~~e~~~l~~rl~~lA~lnpgv~i~l~d~ 195 (369)
T 3cwv_A 120 G-RQWRVMGEH-GHPQGEGAAVTPMEPMPVSAERGVRVHFV--PDATIFEVLAFDRARLSRRCNELAALAPGLRVSFADL 195 (369)
T ss_dssp T-EEEEEEEET-TEECTTCEEESSCCCCSSCCSEEEEEEEE--ECTTTCSCCCCCHHHHHHHHHHHHHHSTTCEEEEEET
T ss_pred C-CEEEEEEeC-CcccccccccCCceEecccCCCCCEEEEE--ECHHHhCCccccHHHHHHHHHHHcCcCCCcEEEEEeC
Confidence 4 344433332 321 023211 2224789999987 343444 67889999999996332 355555544
Q ss_pred e
Q psy16067 1371 K 1371 (1386)
Q Consensus 1371 ~ 1371 (1386)
+
T Consensus 196 ~ 196 (369)
T 3cwv_A 196 Q 196 (369)
T ss_dssp T
T ss_pred C
Confidence 4
No 43
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A*
Probab=95.76 E-value=0.0012 Score=74.54 Aligned_cols=88 Identities=47% Similarity=0.745 Sum_probs=73.2
Q ss_pred cccCCCCcchhhhhccCCCCcccCCCC-CCCCCCcceeeehhhhhhHHHHHHHHHHHHHhhccccccchhhhhhHHHHhh
Q psy16067 436 VTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKEREK 514 (1386)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (1386)
+.++.+..+++.|+++.+..|.|.+.. .++++.||.|.|++..++.+++++..++.||++++++|++||.+.+.|...+
T Consensus 157 V~Sk~~~~~~~~Wes~g~g~fti~~~~~~~~~~~GT~I~L~Lked~~e~le~~~ik~ivkkys~fi~~pI~l~~~k~~~~ 236 (281)
T 3peh_A 157 VYTKNNDDEQYIWESTADAKFTIYKDPRGATLKRGTRISLHLKEDATNLLNDKKLMDLISKYSQFIQFPIYLLHENVYTE 236 (281)
T ss_dssp EEEECTTSCCEEEEEETTSCEEEEECTTCSTTSSEEEEEEEECGGGGGGGSHHHHHHHHHHHTTTCCSCEEEEEEEEEEE
T ss_pred EEEecCCCCEEEEEECCCccEEEEEcCCCCCCCCCeEEEEEECCchhhhcCHHHHHHHHHHhhccCCcceEEeeeeeeee
Confidence 334433345788999988889998764 3567889999999999999999999999999999999999999999998888
Q ss_pred hhchhHHHH
Q psy16067 515 ELSEDEEEE 523 (1386)
Q Consensus 515 ~~~~~~~~~ 523 (1386)
+++.+++++
T Consensus 237 ev~~~~~~~ 245 (281)
T 3peh_A 237 EVLADIAKD 245 (281)
T ss_dssp EEEHHHHHH
T ss_pred ccCcchhhh
Confidence 888775543
No 44
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1
Probab=95.62 E-value=0.0015 Score=72.39 Aligned_cols=78 Identities=73% Similarity=1.261 Sum_probs=64.4
Q ss_pred cccCCCCcchhhhhccCCCCcccCCCCCCCCCCcceeeehhhhhhHHHHHHHHHHHHHhhccccccchhhhhhHHHHh
Q psy16067 436 VTSKHNDDEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKERE 513 (1386)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (1386)
+.++.+..+++.|++..+..|.|.+...++.+.||+|.|+++.++.+++++..+++++++++++|++||.+.+.|+..
T Consensus 149 V~Sk~~~~~~~~W~s~~~g~fti~~~~~~~~~~GT~I~L~lk~d~~e~l~~~~i~~lv~kys~fi~~pI~~~~~~~~~ 226 (239)
T 3nmq_A 149 VITKHNDDEQYAWESSAGGSFTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKERE 226 (239)
T ss_dssp EEEECTTSCCEEEEECSTTEEEEEECCSSCCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHCTTCSSCEEECCCSCC-
T ss_pred EEEeeCCCceeEEEECCCCcEEEEecCCCcCCCCCEEEEEECCChHHhcCHHHHHHHHHHHHhccCCceEEeeeeecc
Confidence 334444445788999888889998876666789999999999999999999999999999999999999888877443
No 45
>3lnu_A Topoisomerase IV subunit B; PARE, ATP-binding, nucleotide-BI topoisomerase; 2.20A {Xanthomonas oryzae PV} PDB: 3lps_A*
Probab=95.30 E-value=0.011 Score=70.20 Aligned_cols=139 Identities=19% Similarity=0.211 Sum_probs=75.1
Q ss_pred CceeeecCCCCCEEEEEeCCCccCHHHH-------HhhccceeecchHHHHHHHhcCCccccccccccceeEEEeeccee
Q psy16067 1223 GQDPIIPNKEEKTLTIIDSGIGMTKADL-------VNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKV 1295 (1386)
Q Consensus 1223 G~I~I~~d~~~~~L~I~DnGiGMt~~dl-------~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV 1295 (1386)
..|.|+++.+ +.|+|+|||-||..++. .....|.-..|.| |-.. .-.---|.-|+|.=++=.+++++
T Consensus 72 ~~I~V~i~~d-gsI~V~DnGrGIPv~~h~~~~~~~~e~i~t~lhaggK-fd~~----~ykvSgGlhGvG~svVNALS~~l 145 (408)
T 3lnu_A 72 KQIEVTLYKD-GSCEVSDDGRGMPVDIHPEEKIPGVELILTRLHAGGK-FNNR----NYTFSGGLHGVGVSVVNALSTKV 145 (408)
T ss_dssp CEEEEEECTT-SCEEEEECSSCCCCSBCTTTCSBHHHHHHHCC-------------------------CHHHHHHTEEEE
T ss_pred ceEEEEEeCC-CeEEEEEcCCCCCcccccccCCcchheEEEecccCCC-cCCC----ceeecCCccccccceehhccCeE
Confidence 3799998765 68999999999987652 1222333344443 2211 11124588999999999999999
Q ss_pred EEEeecCCCcceEEEeCCC---CceE-EecCCCCCCCCCcEEEEEeccchh--hcCCHHHHHHHHHHhcCCC-CcceEEE
Q psy16067 1296 TVTSKHNDDEQYIWESSAG---GSFT-IKPDNSEPLGRGTKIVLHMKEDQA--EYIEEKKIKEIVKKHSQFI-GYPIKLL 1368 (1386)
Q Consensus 1296 ~V~Tk~~~~~~~~w~s~~~---~~y~-i~~~~~~~~~~GT~I~L~Lk~d~~--e~l~~~~l~~lv~kys~fi-~~PI~l~ 1368 (1386)
+|+++..+ ..|..+-..+ +... |.+ ......||+|+......-. .-++.+.|.+.++.++-.. ..-|.+.
T Consensus 146 ~v~v~rdG-k~~~q~f~~G~~~~~l~~ig~--~~~~~~GT~V~F~PD~~iF~~~~f~~~~l~~rlrelA~Ln~Gv~I~l~ 222 (408)
T 3lnu_A 146 ELFIKREG-SEHRMEFRDGNAASKLEVVGT--VGKKNTGTRLRFWADPKYFDTPKFNVRALRHLLRAKAVLCPGLTVKLH 222 (408)
T ss_dssp EEEEEETT-EEEEEEEETTEECSCCEEEEE--CCTTCCEEEEEEEECGGGSSCSCCCHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred EEEEEECC-EEEEEEECCCEECCCceEecc--CcCCCCCcEEEEEECHHHhCCCCcCHHHHHHHHHHHHhhcCCCEEEEE
Confidence 99998755 3333222221 1111 111 1123699999987544321 1257788898888885332 3456665
Q ss_pred Ee
Q psy16067 1369 VE 1370 (1386)
Q Consensus 1369 ~~ 1370 (1386)
.+
T Consensus 223 de 224 (408)
T 3lnu_A 223 DE 224 (408)
T ss_dssp ET
T ss_pred ec
Confidence 54
No 46
>3ttz_A DNA gyrase subunit B; protein-inhibitor complex, ATP-binding, structure-based drug antimicrobial, isomerase-isomerase inhibitor complex; HET: DNA 07N; 1.63A {Staphylococcus aureus} PDB: 3u2d_A* 3u2k_A* 3g75_A* 3g7b_A*
Probab=94.33 E-value=0.021 Score=61.59 Aligned_cols=120 Identities=18% Similarity=0.260 Sum_probs=69.3
Q ss_pred CceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEE-EeecceeEEEeec
Q psy16067 1223 GQDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSA-YLVADKVTVTSKH 1301 (1386)
Q Consensus 1223 G~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~-FmVadkV~V~Tk~ 1301 (1386)
..|.|+++.+ +.|+|+|||.||..+ .-+.|+... .+.+ |+ .|+ =-++.+++|+++.
T Consensus 53 ~~I~V~i~~~-g~i~V~DnG~Gip~~-------~h~~~~~~~-~e~i-----------~t---~SvVNALS~~l~v~v~r 109 (198)
T 3ttz_A 53 NQIEVVIEKD-NWIKVTDNGRGIPVD-------IQEKMGRPA-VEVI-----------LT---SSVVNALSQDLEVYVHR 109 (198)
T ss_dssp CEEEEEEEGG-GEEEEEECSSCCCCS-------BCTTTSSBH-HHHH-----------HH---TCHHHHTEEEEEEEEEE
T ss_pred cEEEEEEeCC-CeEEEEECCCCcccc-------ccCcCCCcc-cccc-----------ce---eEehhhhcCeEEEEEEE
Confidence 4789988776 599999999999985 112232211 1111 11 111 1135788899987
Q ss_pred CCCcceEEEeCCCCceEEecCC--CCCCCCCcEEEEEeccchhhc-----CCHHHHHHHHHHhcCCCC--cceEEEEee
Q psy16067 1302 NDDEQYIWESSAGGSFTIKPDN--SEPLGRGTKIVLHMKEDQAEY-----IEEKKIKEIVKKHSQFIG--YPIKLLVEK 1371 (1386)
Q Consensus 1302 ~~~~~~~w~s~~~~~y~i~~~~--~~~~~~GT~I~L~Lk~d~~e~-----l~~~~l~~lv~kys~fi~--~PI~l~~~~ 1371 (1386)
++ +.|..+-.. |. .+.+.. +...+.||+|+.+ +|..-| ++.+.|.+.++.++ |+. .-|.|..++
T Consensus 110 ~g-~~~~~~f~~-G~-~~~~l~~i~~~~~~GT~V~F~--Pd~~iF~~~~~~~~~~l~~rlrelA-~ln~gv~i~l~der 182 (198)
T 3ttz_A 110 NE-TIYHQAYKK-GV-PQFDLKEVGTTDKTGTVIRFK--ADGEIFTETTVYNYETLQQRIRELA-FLNKGIQITLRDER 182 (198)
T ss_dssp TT-EEEEEEEET-TE-ESSCCEEEEECSCCEEEEEEE--ECTTTCCSCCCCCHHHHHHHHHHHH-HHSTTCEEEEEECS
T ss_pred CC-cEEEEEEeC-CE-ECCCceeccCCCCCCcEEEEE--ECHHHhccCCccCHHHHHHHHHHHh-hcCCCCEEEEEeec
Confidence 65 333333222 21 111110 1123699999987 444445 67889999999996 554 455555444
No 47
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum}
Probab=93.49 E-value=0.014 Score=65.03 Aligned_cols=66 Identities=44% Similarity=0.829 Sum_probs=55.9
Q ss_pred CcchhhhhccCCCCcccCCCC------CCCCCCcceeeehhhhhhHHHHHHHHHHHHHhhccccccchhhhh
Q psy16067 442 DDEQYIWESSAGGSFTIKPDN------SEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLL 507 (1386)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (1386)
..+++.|++..+..|.|.+.. .+..+.||+|.||++.++.+++++..+++++++++++|++||.+.
T Consensus 199 dd~~~~WeS~g~gsfti~~~~~~~~~~g~~~~~GT~I~L~Lked~~e~le~~~ik~likkys~fi~~PI~l~ 270 (272)
T 3ied_A 199 EDQIYRWSSDLKGSFSVNEIKKYDQEYDDIKGSGTKIILHLKEECDEYLEDYKLKELIKKYSEFIKFPIEIW 270 (272)
T ss_dssp SSCEEEEEECSSSEEEEEECTTCTTCC--CCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHCTTCCSCEEEC
T ss_pred CCceEEEEECCCCCEEEEECcccccccCCCCCCCcEEEEEECCChHHhcCHHHHHHHHHHHHhCCCCCeEEE
Confidence 345788999998899988664 235788999999999999999999999999999999999997553
No 48
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A*
Probab=93.11 E-value=0.015 Score=64.99 Aligned_cols=76 Identities=75% Similarity=1.272 Sum_probs=58.0
Q ss_pred chhhhhccCCCCcccCCCCCCCCCCcceeeehhhhhhHHHHHHHHHHHHHhhccccccchhhhhhHHHHhhhhchh
Q psy16067 444 EQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKEREKELSED 519 (1386)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (1386)
+++.|+...+..+.+.+...++.+.||.|.|+++..+.++.++..++.+|++.++++++|+.+.+.|++.++++.+
T Consensus 178 ~g~~w~s~gg~~~~v~~~~~~~~~~GT~I~l~LK~~~~e~~e~~~I~~iv~k~s~~l~~PI~~~~~~~~~~~~~~~ 253 (256)
T 3o0i_A 178 EQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSDD 253 (256)
T ss_dssp CEEEEEECSTTEEEEEECCSSCCSSEEEEEEEECGGGGGGGCHHHHHHHHHHHCTTCSSCEEECCC----------
T ss_pred ceEEEEEeccceEEEeeCCCCCCCCCcEEEEEEcCcchhhccHHHHHHHHHHHHhhCCCCeEEeeeeeecccCCCc
Confidence 4678998888888888765556788999999999999999999999999999999999999999888777766543
No 49
>1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A*
Probab=92.67 E-value=0.044 Score=65.31 Aligned_cols=110 Identities=14% Similarity=0.155 Sum_probs=65.4
Q ss_pred CceeeecCCCCCEEEEEeCCCccCHHHHHh--------hccceeecchHHHHHHHhcCCccccccccccceeEEEeecce
Q psy16067 1223 GQDPIIPNKEEKTLTIIDSGIGMTKADLVN--------NLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADK 1294 (1386)
Q Consensus 1223 G~I~I~~d~~~~~L~I~DnGiGMt~~dl~~--------~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadk 1294 (1386)
..|.|+++.+++.|+|+|||-||..+.... -|+++ ..|.| | +.++-.---|.-|||.=.+=.++++
T Consensus 87 ~~I~V~i~~d~~sI~V~DnGrGIPv~~h~~~g~~~~E~v~t~L-haGgK-f----d~~~ykvSGGLhGVG~SvVNALS~~ 160 (418)
T 1pvg_A 87 KRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHL-LTSSN-Y----DDDEKKVTGGRNGYGAKLCNIFSTE 160 (418)
T ss_dssp CEEEEEEETTTTEEEEEEESSCCCCSBCTTTCSBHHHHHHHSS-SEESC-C----CTTSCCCCSCCSSCHHHHHHHTEEE
T ss_pred CEEEEEEECCCCEEEEEECCCcccCcccccCCcccceEEEEEE-ecccc-c----CCCceeccCCccceeeeeeeeccce
Confidence 589999999889999999999998654211 12222 22222 1 0011111348999998777778888
Q ss_pred eEEEeec-CCCcceEEEeCCCCce----EEecCCCCCCCCCcEEEEEeccc
Q psy16067 1295 VTVTSKH-NDDEQYIWESSAGGSF----TIKPDNSEPLGRGTKIVLHMKED 1340 (1386)
Q Consensus 1295 V~V~Tk~-~~~~~~~w~s~~~~~y----~i~~~~~~~~~~GT~I~L~Lk~d 1340 (1386)
++|+++. .++..|..+-..+..- .|.... ....||+|+.+...+
T Consensus 161 l~V~v~r~rdGk~y~q~f~~G~~~~~~p~i~~~~--~~~tGT~V~F~PD~~ 209 (418)
T 1pvg_A 161 FILETADLNVGQKYVQKWENNMSICHPPKITSYK--KGPSYTKVTFKPDLT 209 (418)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEECCCEEEECC--SSCCEEEEEEEECGG
T ss_pred EEEEEEECCCCcEEEEEEEcCCCccCCCeecccC--CCCCceEEEEEEChH
Confidence 9999986 3444443222221111 233221 235899999876554
No 50
>3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli}
Probab=91.92 E-value=0.038 Score=57.91 Aligned_cols=79 Identities=15% Similarity=0.127 Sum_probs=33.9
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecceeEEEeecCC
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKHND 1303 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV~V~Tk~~~ 1303 (1386)
.|+|.+..+. |+|+|||.||+.+++..-+-..-++ .. .-.+..|+|++-|--+++..
T Consensus 138 ~i~i~~~~~~--i~V~D~G~Gi~~~~~~~if~~f~~~-~~------------~~~~g~GlGL~i~~~i~~~~-------- 194 (222)
T 3jz3_A 138 VVDVTLNADN--FIVRDNGPGVTPEALARIGERFYRP-PG------------QTATGSGLGLSIVQRIAKLH-------- 194 (222)
T ss_dssp EEEEEECSSE--EEEECSCC---------------------------------------CTHHHHHHHHHHT--------
T ss_pred eEEEEEccCe--EEEEECCCCCCHHHHHHHHhhhccC-CC------------CCCCcccccHHHHHHHHHHc--------
Confidence 4666665544 9999999999998776544322211 00 11235789977654333321
Q ss_pred CcceEEEeCCCCceEEecCCCCCCCCCcEEEEEecc
Q psy16067 1304 DEQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKE 1339 (1386)
Q Consensus 1304 ~~~~~w~s~~~~~y~i~~~~~~~~~~GT~I~L~Lk~ 1339 (1386)
+|..+|.. ..+.||+|++++-.
T Consensus 195 ----------gG~i~i~s----~~~~Gt~v~~~~P~ 216 (222)
T 3jz3_A 195 ----------GMNVEFGN----AEQGGFEAKVSWLE 216 (222)
T ss_dssp ----------TCEEECCB----CTTSSBEEEEECCC
T ss_pred ----------CCEEEEEc----CCCCcEEEEEeecC
Confidence 34444442 23678999888854
No 51
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A*
Probab=90.28 E-value=0.046 Score=61.58 Aligned_cols=77 Identities=43% Similarity=0.695 Sum_probs=55.6
Q ss_pred chhhhhccCCCCcccCCCC-CCCCCCcceeeehhhhhhHHHHHHHHHHHHHhhccccccchhhhhhHHHHhhhhchhHH
Q psy16067 444 EQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKEREKELSEDEE 521 (1386)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (1386)
+++.|++.. ..|.+.+.. ..+.+.||.|.|++..+..+++++..++.++++++++|++||.+..+|...++++.+++
T Consensus 151 ~~~~w~s~g-g~~~i~~~~~~~~~~~GT~I~L~Lk~d~~e~le~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~~~~~ 228 (269)
T 1qy5_A 151 TQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKTETVEEPMEEE 228 (269)
T ss_dssp CCEEEEECS-SCEEEEECTTCSCSSSEEEEEEEECGGGGGGGSHHHHHHHHHTTCTTCSSCEEEEEECC----------
T ss_pred cEEEEEEeC-CEEEEEeccCCCcCCCCeEEEEEEcccchhhhhHHHHHHHHHhhhcccceeeEEeeeeeeeeccCccch
Confidence 357798766 678777654 23467899999999988888888999999999999999999999888877777766543
No 52
>4ew8_A Sensor protein DIVL; signal transduction, two-component regulatory system, hiska GHKL domain, structural genomics; 2.50A {Caulobacter crescentus}
Probab=89.91 E-value=0.075 Score=57.67 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=24.0
Q ss_pred CceeeecCCC--CCEEEEEeCCCccCHHHHHhhc
Q psy16067 1223 GQDPIIPNKE--EKTLTIIDSGIGMTKADLVNNL 1254 (1386)
Q Consensus 1223 G~I~I~~d~~--~~~L~I~DnGiGMt~~dl~~~L 1254 (1386)
|.|.|.+..+ .-.|+|.|||.||+.+++...+
T Consensus 175 ~~I~i~~~~~~~~~~i~V~D~G~Gi~~~~~~~if 208 (268)
T 4ew8_A 175 GRVTLSARRALGEVRLDVSDTGRGVPFHVQAHIF 208 (268)
T ss_dssp CEEEEEEEECSSEEEEEEEESSCCCCHHHHTTTT
T ss_pred CEEEEEEEecCCEEEEEEEcCCCCCCHHHHHHHH
Confidence 5677766544 3478899999999998876544
No 53
>3ehh_A Sensor kinase (YOCF protein); four-helix bundle, GHL ATPase domain, transferase; HET: MSE ADP; 2.10A {Bacillus subtilis} PDB: 3ehj_A* 3gie_A* 3gif_A* 3gig_A* 3ehf_A*
Probab=87.13 E-value=0.11 Score=54.69 Aligned_cols=28 Identities=14% Similarity=0.041 Sum_probs=18.4
Q ss_pred CceeeecC--CCCCEEEEEeCCCccCHHHH
Q psy16067 1223 GQDPIIPN--KEEKTLTIIDSGIGMTKADL 1250 (1386)
Q Consensus 1223 G~I~I~~d--~~~~~L~I~DnGiGMt~~dl 1250 (1386)
|.|.|.+. .+.-.|+|+|||+||+.+++
T Consensus 149 ~~i~i~~~~~~~~~~i~V~D~G~Gi~~~~~ 178 (218)
T 3ehh_A 149 KTCRVDIQQLWKEVVITVSDDGTFKGEENS 178 (218)
T ss_dssp SEEEEEEEEETTEEEEEEEESSCCCC----
T ss_pred CEEEEEEEEeCCEEEEEEEECCcCCCCCCC
Confidence 56777664 44458899999999999766
No 54
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ...
Probab=87.00 E-value=0.11 Score=57.12 Aligned_cols=73 Identities=75% Similarity=1.274 Sum_probs=55.0
Q ss_pred hhhhhccCCCCcccCCCCCCCCCCcceeeehhhhhhHHHHHHHHHHHHHhhccccccchhhhhhHHHHhhhhc
Q psy16067 445 QYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKEREKELS 517 (1386)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (1386)
.+.|+...+..+.+.+....+...||.|.++++.+..+..++..++.++++.++++.+|+.+...|...+++.
T Consensus 151 ~~~w~~~g~~~~~v~~~~~~~~~~GT~I~v~Lk~~~~E~~e~~~i~~iv~~~a~~l~~Pi~~~~~~~~~~~~~ 223 (228)
T 3t0h_A 151 QYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVS 223 (228)
T ss_dssp EEEEEECSTTEEEEEECCSSCCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHSTTCSSCEEECCC--------
T ss_pred cEEEEEcCCceEEEeecCCCCCCCCcEEEEEECCchhhhhhHHHHHHHHHHHHhhCCCCeEEeecceeeccCC
Confidence 5678888777788777644456789999999999888888888899999999999999999988776665554
No 55
>1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A
Probab=86.78 E-value=0.12 Score=51.06 Aligned_cols=35 Identities=11% Similarity=0.135 Sum_probs=25.4
Q ss_pred CceeeecC--CCCCEEEEEeCCCccCHHHHHhhccce
Q psy16067 1223 GQDPIIPN--KEEKTLTIIDSGIGMTKADLVNNLGTI 1257 (1386)
Q Consensus 1223 G~I~I~~d--~~~~~L~I~DnGiGMt~~dl~~~LgtI 1257 (1386)
|.|+|.+. .+.-.|+|+|+|.||+.+++...+-..
T Consensus 65 ~~I~i~~~~~~~~~~i~v~D~G~gi~~~~~~~if~~f 101 (150)
T 1ysr_A 65 TLVQLSAVSSRAGVEIAIDDNGSGVPEGERQVVFERF 101 (150)
T ss_dssp SEEEEEEEEETTEEEEEEEESSSCCCGGGHHHHHTSC
T ss_pred cEEEEEEEecCCEEEEEEEECCCCCCHHHHHHHhccc
Confidence 46776664 444578999999999998887655443
No 56
>1id0_A PHOQ histidine kinase; PHOQ/PHOP, signal transduction, transferase; HET: ANP; 1.60A {Escherichia coli} SCOP: d.122.1.3 PDB: 3cgz_A 3cgy_A
Probab=86.69 E-value=0.19 Score=49.60 Aligned_cols=31 Identities=16% Similarity=0.126 Sum_probs=22.6
Q ss_pred ceeeec--CCCCCEEEEEeCCCccCHHHHHhhc
Q psy16067 1224 QDPIIP--NKEEKTLTIIDSGIGMTKADLVNNL 1254 (1386)
Q Consensus 1224 ~I~I~~--d~~~~~L~I~DnGiGMt~~dl~~~L 1254 (1386)
.|+|.+ +.+.-.|+|+|||.||+.+++...+
T Consensus 63 ~i~i~~~~~~~~~~i~i~D~G~gi~~~~~~~~f 95 (152)
T 1id0_A 63 FVEISARQTDEHLYIVVEDDGPGIPLSKREVIF 95 (152)
T ss_dssp EEEEEEEECSSCEEEEEEESSSCCCGGGTTGGG
T ss_pred eEEEEEEecCCEEEEEEEeCCCCcCHHHHHHHh
Confidence 455544 4455589999999999998776544
No 57
>3ehg_A Sensor kinase (YOCF protein); GHL ATPase domain, transferase; HET: ATP; 1.74A {Bacillus subtilis}
Probab=83.96 E-value=0.1 Score=50.87 Aligned_cols=28 Identities=14% Similarity=0.052 Sum_probs=20.7
Q ss_pred CceeeecCCC--CCEEEEEeCCCccCHHHH
Q psy16067 1223 GQDPIIPNKE--EKTLTIIDSGIGMTKADL 1250 (1386)
Q Consensus 1223 G~I~I~~d~~--~~~L~I~DnGiGMt~~dl 1250 (1386)
+.|+|.+..+ .-.|+|+|||.||+.+++
T Consensus 59 ~~i~i~~~~~~~~~~i~V~D~G~Gi~~~~~ 88 (128)
T 3ehg_A 59 KTCRVDIQQLWKEVVITVSDDGTFKGEENS 88 (128)
T ss_dssp SEEEEEEEEETTEEEEEEEESSCCCSCSSC
T ss_pred cEEEEEEEEeCCEEEEEEEECCcCcCcccC
Confidence 5677766543 447899999999998654
No 58
>3sl2_A Sensor histidine kinase YYCG; ATP binding, intact ATP, bergerat fold, TR; HET: ATP; 1.61A {Bacillus subtilis}
Probab=83.13 E-value=0.23 Score=50.79 Aligned_cols=59 Identities=24% Similarity=0.362 Sum_probs=32.5
Q ss_pred Cceeeec--CCCC--CEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEee
Q psy16067 1223 GQDPIIP--NKEE--KTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLV 1291 (1386)
Q Consensus 1223 G~I~I~~--d~~~--~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmV 1291 (1386)
|.|+|.+ ..++ -.|+|+|||.||+.+++..-+....+.... ...-.+..|+|++.+-.+
T Consensus 63 ~~i~I~i~~~~~~~~~~i~V~D~G~gi~~~~~~~lf~~~~~~~~~----------~~~~~~g~GlGL~iv~~~ 125 (177)
T 3sl2_A 63 GHVTFSIDVNEEEELLYISVKDEGIGIPKKDVEKVFDRFYRVDKA----------RTRKLGGTGLGLAIAKEM 125 (177)
T ss_dssp CCEEEEEEEETTTTEEEEEEECCSSCCCTTTTTTTTSTTCCCC----------------CCCCCCHHHHHHHH
T ss_pred CeEEEEEEEccCCCEEEEEEEECCCCCCHHHHHHHHhhhccCCCC----------CCCCCCCCCcCHHHHHHH
Confidence 4444444 4333 478899999999998776554433222111 011224678888755433
No 59
>3d36_A Sporulation kinase B; GHKL ATPase, four helix bundle, class I two-component histidine kinase, phosphoprotein; HET: ADP; 2.03A {Geobacillus stearothermophilus}
Probab=82.79 E-value=0.44 Score=50.50 Aligned_cols=32 Identities=25% Similarity=0.270 Sum_probs=22.9
Q ss_pred eeeecCCCCCEEEEEeCCCccCHHHHHhhccc
Q psy16067 1225 DPIIPNKEEKTLTIIDSGIGMTKADLVNNLGT 1256 (1386)
Q Consensus 1225 I~I~~d~~~~~L~I~DnGiGMt~~dl~~~Lgt 1256 (1386)
|.+..+.+.-.|+|.|||.||+.+++...+..
T Consensus 147 i~~~~~~~~~~i~i~D~G~gi~~~~~~~if~~ 178 (244)
T 3d36_A 147 VYVSIDNGRVLIRIADTGVGMTKEQLERLGEP 178 (244)
T ss_dssp EEEEEETTEEEEEEEECSSCCCHHHHHHTTST
T ss_pred EEEEEeCCEEEEEEEecCCCCCHHHHHHHhcc
Confidence 34444455567999999999999988765533
No 60
>2btz_A Pyruvate dehydrogenase kinase isoenzyme 2; GHKL motif regulation, transferase; 2.2A {Homo sapiens} PDB: 2bu2_A* 2bu5_A* 2bu6_A* 2bu7_A* 2bu8_A* 3crk_A* 1jm6_A* 3crl_A*
Probab=81.34 E-value=0.5 Score=55.21 Aligned_cols=64 Identities=14% Similarity=0.191 Sum_probs=32.2
Q ss_pred ceeeecC--CCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeec
Q psy16067 1224 QDPIIPN--KEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVA 1292 (1386)
Q Consensus 1224 ~I~I~~d--~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVa 1292 (1386)
.|+|.+. .+.-.|+|+|+|.||+++++..-+-..-+.....-.+ ......+-+|+|++-|-.++
T Consensus 259 ~I~I~~~~~~~~v~i~V~D~G~GI~~~~~~~iF~~f~~~~~~~~~~-----~~~~~~~G~GLGL~i~~~i~ 324 (394)
T 2btz_A 259 PIKVMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPG-----TGGTPLAGFGYGLPISRLYA 324 (394)
T ss_dssp CEEEEEEECSSEEEEEEEECSCCCCHHHHHHHTCTTTTCCC-------------------CCHHHHHHHHH
T ss_pred CEEEEEEeCCCEEEEEEEeCCCCCCHHHHHHHhcccccCCCCCCcc-----cCCCCCCCccCCHHHHHHHH
Confidence 4555554 4445789999999999998876553322211110000 01123456899987654444
No 61
>3zxo_A Redox sensor histidine kinase response regulator; transferase; HET: MSE; 1.90A {Mycobacterium tuberculosis}
Probab=81.24 E-value=0.29 Score=47.06 Aligned_cols=26 Identities=15% Similarity=0.261 Sum_probs=19.3
Q ss_pred Cceeeec--CCCCCEEEEEeCCCccCHHH
Q psy16067 1223 GQDPIIP--NKEEKTLTIIDSGIGMTKAD 1249 (1386)
Q Consensus 1223 G~I~I~~--d~~~~~L~I~DnGiGMt~~d 1249 (1386)
|.|.|.+ +.+ -.|+|+|||.||+.++
T Consensus 62 ~~i~i~~~~~~~-~~i~v~D~G~gi~~~~ 89 (129)
T 3zxo_A 62 STLTVRVKVDDD-LCIEVTDNGRGMPDEF 89 (129)
T ss_dssp CEEEEEEEESSE-EEEEEEECCCCCTTTT
T ss_pred ceEEEEEEEcCC-EEEEEecCCCCCCccc
Confidence 4566555 455 6889999999998764
No 62
>1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A*
Probab=80.72 E-value=0.31 Score=56.80 Aligned_cols=31 Identities=26% Similarity=0.296 Sum_probs=22.1
Q ss_pred ceeeec--CCCCCEEEEEeCCCccCHHHHHhhc
Q psy16067 1224 QDPIIP--NKEEKTLTIIDSGIGMTKADLVNNL 1254 (1386)
Q Consensus 1224 ~I~I~~--d~~~~~L~I~DnGiGMt~~dl~~~L 1254 (1386)
.|+|.+ +.+.-.|+|+|+|+||+++++..-+
T Consensus 267 ~I~I~~~~~~~~v~i~V~D~G~GI~~~~~~~iF 299 (388)
T 1gkz_A 267 DVVITIANNDVDLIIRISDRGGGIAHKDLDRVM 299 (388)
T ss_dssp CEEEEEEECSSEEEEEEECCSCCCCTTTTTTTT
T ss_pred CEEEEEEeCCCEEEEEEEEeCCCcCHHHHHHhc
Confidence 455554 4444579999999999998775443
No 63
>1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A*
Probab=80.60 E-value=0.65 Score=54.86 Aligned_cols=65 Identities=18% Similarity=0.267 Sum_probs=33.8
Q ss_pred ceeeecC--CCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeec
Q psy16067 1224 QDPIIPN--KEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVA 1292 (1386)
Q Consensus 1224 ~I~I~~d--~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVa 1292 (1386)
.|+|.+. .+.-.|+|+|+|+||+++++..-+-..-+..... ... .......+-+|+|++-|-.++
T Consensus 282 ~I~I~~~~~~~~v~I~V~D~G~GI~~e~l~~iF~~f~~~~~~~---~~~-~~~~~~~~G~GLGL~I~k~iv 348 (419)
T 1y8o_A 282 AVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPRP---SLE-PTRAAPLAGFGYGLPISRLYA 348 (419)
T ss_dssp CEEEEEEECSSEEEEEEEECSCCCCHHHHGGGGCTTTC-----------------CC--CTTHHHHHHHHH
T ss_pred CEEEEEEeCCCEEEEEEEECCCCCCHHHHHHHhCcccccCCCC---Ccc-ccCCCCcCCeecCHHHHHHHH
Confidence 5666554 4445789999999999998876553322211100 000 011223466899987654443
No 64
>1i58_A Chemotaxis protein CHEA; beta-alpha sandwich, signaling protein, transferase; HET: ACP ADP; 1.60A {Thermotoga maritima} SCOP: d.122.1.3 PDB: 1i59_A* 1i5a_A* 1i5b_A* 1i5c_A* 1i5d_A*
Probab=80.34 E-value=0.54 Score=48.46 Aligned_cols=28 Identities=18% Similarity=0.343 Sum_probs=21.0
Q ss_pred CceeeecC--CCCCEEEEEeCCCccCHHHH
Q psy16067 1223 GQDPIIPN--KEEKTLTIIDSGIGMTKADL 1250 (1386)
Q Consensus 1223 G~I~I~~d--~~~~~L~I~DnGiGMt~~dl 1250 (1386)
|.|+|.+. .+.-.|+|+|||.||+.+++
T Consensus 79 ~~I~I~~~~~~~~~~i~V~D~G~Gi~~~~~ 108 (189)
T 1i58_A 79 GTLILSARHEGNNVVIEVEDDGRGIDKEKI 108 (189)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSCCCHHHH
T ss_pred CeEEEEEEecCCEEEEEEEeCCCCcCHHHH
Confidence 35666554 44457899999999999987
No 65
>2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A*
Probab=80.25 E-value=0.26 Score=53.30 Aligned_cols=35 Identities=14% Similarity=0.206 Sum_probs=24.7
Q ss_pred CceeeecCCC--CCEEEEEeCCCccCHHHHHhhccce
Q psy16067 1223 GQDPIIPNKE--EKTLTIIDSGIGMTKADLVNNLGTI 1257 (1386)
Q Consensus 1223 G~I~I~~d~~--~~~L~I~DnGiGMt~~dl~~~LgtI 1257 (1386)
+.|.|.+..+ .-.|+|.|||+||+.+++..-|-..
T Consensus 161 ~~i~i~~~~~~~~~~i~V~D~G~Gi~~~~~~~if~~f 197 (258)
T 2c2a_A 161 KYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQF 197 (258)
T ss_dssp CEEEEEEEEETTEEEEEEEECSSCCCGGGTTGGGSTT
T ss_pred eeEEEEEecCCCeEEEEEEecCCCCCHHHHHhhcccc
Confidence 4577766543 3468899999999998776555443
No 66
>4gfh_A DNA topoisomerase 2; topoisomerase, protein-DNA complex, DNA supercoiling, DNA replication; HET: DNA PTR TSP ANP; 4.41A {Saccharomyces cerevisiae}
Probab=79.93 E-value=1.4 Score=58.82 Aligned_cols=124 Identities=11% Similarity=0.122 Sum_probs=62.6
Q ss_pred ceeeecCCCCCEEEEEeCCCccCHH----------HHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecc
Q psy16067 1224 QDPIIPNKEEKTLTIIDSGIGMTKA----------DLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAD 1293 (1386)
Q Consensus 1224 ~I~I~~d~~~~~L~I~DnGiGMt~~----------dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVad 1293 (1386)
.|.|+++.+++.|+|+|||-||..+ |++ .|.-.+|.|- +.++-.---|.-|||.=-+=.++.
T Consensus 83 ~I~V~i~~~d~sisV~DnGRGIPvd~h~~~~~~~~Evv---~t~LhAGgKF-----d~~~ykvSGGLHGVG~svVNALS~ 154 (1177)
T 4gfh_A 83 RIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMI---FGHLLTSSNY-----DDDEKKVTGGRNGYGAKLCNIFST 154 (1177)
T ss_dssp EEEEEEETTTTEEEEEECSSCCCCSBCTTTCSBHHHHH---HHSSSEESCC-----CCSSCCCCSCCSSCHHHHHHHTEE
T ss_pred eEEEEEECCCCEEEEEecCCcccccccCCCCCEeeeee---ccccccccCc-----CCCCCeEeccCCChhhhHHhhcCC
Confidence 6999999999999999999998642 222 2222223221 111111134899999522222234
Q ss_pred eeEEEeec-CCCcceEEEeCCCCc----eEEecCCCCCCCCCcEEEEEeccchh--hcCCHHHHHHHHHHh
Q psy16067 1294 KVTVTSKH-NDDEQYIWESSAGGS----FTIKPDNSEPLGRGTKIVLHMKEDQA--EYIEEKKIKEIVKKH 1357 (1386)
Q Consensus 1294 kV~V~Tk~-~~~~~~~w~s~~~~~----y~i~~~~~~~~~~GT~I~L~Lk~d~~--e~l~~~~l~~lv~ky 1357 (1386)
+.+|++.. .++..|.-+-..+.. -.|.. ......||+|+-....+-. .-++.+.+..+.++.
T Consensus 155 ~~~vev~~~r~Gk~y~q~f~~g~~~~~~~~i~~--~~~~~tGT~V~F~PD~~iF~~~~~~~d~l~~~~r~~ 223 (1177)
T 4gfh_A 155 EFILETADLNVGQKYVQKWENNMSICHPPKITS--YKKGPSYTKVTFKPDLTRFGMKELDNDILGVMRRRV 223 (1177)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTTEECCCEEEE--CCSSCCCEEEEEEECHHHHTCSSCCHHHHHHHHHHH
T ss_pred ceEEEEEEEcCCEEEEEEEECCcccCCCCeeec--CCCCCCceEEEEEeCHHhcCCcEeCHHHHHHHHHHH
Confidence 43444432 223334322222211 12221 1233579999876644311 124666666555554
No 67
>1bxd_A ENVZ(290-450), protein (osmolarity sensor protein (ENVZ)); histidine kinase, osmosensor, His-Asp phosphorelay system, signal transduction; HET: ANP; NMR {Escherichia coli BL21} SCOP: d.122.1.3
Probab=77.75 E-value=0.31 Score=48.90 Aligned_cols=59 Identities=14% Similarity=0.186 Sum_probs=35.8
Q ss_pred CCceeeecCC--CCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeec
Q psy16067 1222 FGQDPIIPNK--EEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVA 1292 (1386)
Q Consensus 1222 ~G~I~I~~d~--~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVa 1292 (1386)
-|.|.|.+.. +.-.|+|+|||.||+.+++...+-...+. .. . .--+..|+|++-+--++
T Consensus 64 ~~~I~i~~~~~~~~~~i~i~D~G~gi~~~~~~~~f~~f~~~-~~---------~--~~~~g~GlGL~i~~~~~ 124 (161)
T 1bxd_A 64 NGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRG-DS---------A--RTISGTGLGLAIVQRIV 124 (161)
T ss_dssp CSCEEEEEEEETTEEEEEEEEESSCSCTTGGGCSSCCCCCC-SC---------C--CCCCCCSCCCCTTHHHH
T ss_pred CCeEEEEEEEcCCEEEEEEEeCCCCCCHHHHHHhCCCceeC-CC---------C--CCCCCcccCHHHHHHHH
Confidence 4677776643 34478999999999998776544332221 11 0 11245789987665444
No 68
>2e0a_A Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP-binding, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: ANP; 1.86A {Homo sapiens} PDB: 2zdx_A* 2zdy_A* 2zkj_A* 3d2r_A*
Probab=76.71 E-value=0.64 Score=54.38 Aligned_cols=65 Identities=20% Similarity=0.225 Sum_probs=36.0
Q ss_pred ceeeecC--CCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeec
Q psy16067 1224 QDPIIPN--KEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVA 1292 (1386)
Q Consensus 1224 ~I~I~~d--~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVa 1292 (1386)
.|+|.+. .+.-.|+|+|+|.||+++++..-+-..-+..... ... .......+-+|+|++-|-.++
T Consensus 258 ~I~I~~~~~~~~v~i~V~D~G~GI~~~~~~~if~~f~~~~~~~---~~~-~~~~~~~~G~GLGL~i~~~i~ 324 (394)
T 2e0a_A 258 PIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTP---VMD-NSRNAPLAGFGYGLPISRLYA 324 (394)
T ss_dssp CEEEEEEECSSEEEEEEEECSCCCCGGGHHHHTSTTCCSSCCC----------CCCSSCSSCHHHHHHHHH
T ss_pred CEEEEEEeCCCEEEEEEEeCCCCcCHHHHHHHhCcCccCCCCC---CcC-cCCCCCCCCcccCHHHHHHHH
Confidence 4555554 4445899999999999988876553322211100 000 011224567899987654443
No 69
>1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A*
Probab=76.54 E-value=0.83 Score=45.10 Aligned_cols=58 Identities=24% Similarity=0.299 Sum_probs=31.8
Q ss_pred ceeeec--CCCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeecceeEE
Q psy16067 1224 QDPIIP--NKEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTV 1297 (1386)
Q Consensus 1224 ~I~I~~--d~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVadkV~V 1297 (1386)
.|+|.+ +.+.-.|+|+|||.||+ ++...+...-. . +. -.+..|+|++-+-.+++++.+
T Consensus 63 ~I~i~~~~~~~~~~i~V~D~G~g~~--~~~~~~~~~~~-~-~~------------~~~~~GlGL~iv~~~~~~i~~ 122 (145)
T 1th8_A 63 IVSISVIIEDGVVHLTVRDEGVGIP--DIEEARQPLFT-T-KP------------ELERSGMGFTIMENFMDEVIV 122 (145)
T ss_dssp EEEEEEEEETTEEEEEEEECSSCCS--CHHHHTCCC---------------------CCCSCHHHHHHHHSSEEEE
T ss_pred EEEEEEEEeCCEEEEEEEECCCCcC--hHHHhhccccc-C-CC------------CCCCCcchHHHHHHHHheEEE
Confidence 455544 44445789999999999 44433322211 1 10 113478998776655554433
No 70
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=72.90 E-value=0.46 Score=59.71 Aligned_cols=80 Identities=64% Similarity=1.058 Sum_probs=60.8
Q ss_pred cccCCCCcchhhhhccCCCCcccCCCC-CCCCCCcceeeehhhhhhHHHHHHHHHHHHHhhccccccchhhhhhHHHHhh
Q psy16067 436 VTSKHNDDEQYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKEREK 514 (1386)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (1386)
+.++.+..+++.|++..+..+.|.+.. .++.+.||.|.+++..++.+++++..++.++++++++|++||.+.+.|+..+
T Consensus 136 V~Sk~~~~~~~~W~s~g~~~~ti~~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~ 215 (677)
T 2cg9_A 136 VISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEK 215 (677)
T ss_dssp EEEECTTSCEEEEEECSSSEEEEEECCSSCCCSSEEEEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCC
T ss_pred EEEccCCCceEEEEEcCCceEEEeecCCCCCCCCCeEEEEEEcchhhccccHHHHHHHHHHHHhhCCCCeEEeecccccc
Confidence 334333334678999888888888742 2456789999999999888899999999999999999999998865443333
Q ss_pred h
Q psy16067 515 E 515 (1386)
Q Consensus 515 ~ 515 (1386)
+
T Consensus 216 ~ 216 (677)
T 2cg9_A 216 E 216 (677)
T ss_dssp C
T ss_pred C
Confidence 3
No 71
>1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A
Probab=71.52 E-value=1.3 Score=51.78 Aligned_cols=29 Identities=17% Similarity=0.367 Sum_probs=21.4
Q ss_pred CceeeecC--CCCCEEEEEeCCCccCHHHHH
Q psy16067 1223 GQDPIIPN--KEEKTLTIIDSGIGMTKADLV 1251 (1386)
Q Consensus 1223 G~I~I~~d--~~~~~L~I~DnGiGMt~~dl~ 1251 (1386)
|.|+|... .+.-.|+|+|||.||+.+.+.
T Consensus 138 g~I~i~~~~~~~~v~i~V~D~G~Gi~~~~~~ 168 (379)
T 1b3q_A 138 GTLILSARHEGNNVVIEVEDDGRGIDKEKII 168 (379)
T ss_dssp EEEEEEEEEETTEEEEEEEECSCCCCHHHHH
T ss_pred cEEEEEEEEeCCEEEEEEEECCCCCCHHHHH
Confidence 45666554 334478899999999999873
No 72
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A*
Probab=66.46 E-value=1.1 Score=50.40 Aligned_cols=71 Identities=76% Similarity=1.292 Sum_probs=51.1
Q ss_pred hhhhhccCCCCcccCCCCCCCCCCcceeeehhhhhhHHHHHHHHHHHHHhhccccccchhhhhhHHHHhhh
Q psy16067 445 QYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKEREKE 515 (1386)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (1386)
.+.|+...+..+.+.+....+...||.|.+++..+..+++++..++.++++.+.++++|+.+..+|+..++
T Consensus 187 ~~~w~~~~~~~~~i~~~~~~~~~~GT~I~l~Lk~~~~e~~e~~~i~~lv~k~s~fi~~PI~~~~~~~~~~~ 257 (264)
T 1yc1_A 187 QYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKE 257 (264)
T ss_dssp CEEEEECSTTEEEEEECCSSCCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHTTTCSSCEEECCCC-----
T ss_pred eEEEEEcCCceEEEeecCCCCCCCCeEEEEEECCchhhhhhHHHHHHHHHHHHhhCCCCEEEeeccccccc
Confidence 35687766666777665433456789999998877667788888999999999999999988776644443
No 73
>1d2v_A Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_A* 1d5l_A* 1d7w_A* 1dnu_A* 1dnw_A* 4dl1_A* 3zs1_A* 3f9p_A* 1mhl_A* 1myp_A* 3zs0_A*
Probab=66.17 E-value=5.6 Score=38.44 Aligned_cols=67 Identities=21% Similarity=0.318 Sum_probs=44.2
Q ss_pred CCCCCCCCCCCccccCCCCCCccccCCccccccccccccccCCCCCCCCCCCCCCCC--CCCCCchhhhHHHHHHhhcc
Q psy16067 604 GDRVRSTSGNCRPILIPSNDDFYSQFNRRCLEYKRSLAINCSVGALQPDKICPGRES--NPRPSAYKADVLATKLIRLK 680 (1386)
Q Consensus 604 ~~~~~~~~p~C~pI~vp~~Dp~~~~~~~~Cm~f~RS~~~~c~~G~~~~~~~~~~~~~--~pr~~~~~~~~~~~~~~~~~ 680 (1386)
...+|+.++.|+++.-|.... .=.+|.|.++.....|...|+...+++.. .++| .+|.++++++...
T Consensus 4 ~~~yRt~DG~cNNl~~P~~G~-------a~t~f~R~lpp~Y~DG~~~p~~~~~~~~~~g~~lP---~pR~VS~~l~~~~ 72 (104)
T 1d2v_A 4 QDKYRTITGMCNNRRSPTLGA-------SNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVA---LARAVSNEIVRFP 72 (104)
T ss_dssp CCSSCCSSCTTSSSSSTTTTC-------SSEECBCSSCCCCTTSSSCCTTSSTTCCBTTBCCC---CHHHHHHHHTCCC
T ss_pred CCCccCCCCCccCCCCCccCc-------CCCccccccCcccccCcccccccccccccCCCcCC---CHHHHHHHHHhcc
Confidence 356899999999998654433 33479999998778887777643322211 1333 3588888887544
No 74
>2q8g_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; GHKL ATPase/kinase family, pyruvate dehydrogenase complex, mitochondrial kinase; HET: AZX; 1.90A {Homo sapiens} PDB: 2q8f_A* 2q8h_A
Probab=44.99 E-value=13 Score=43.57 Aligned_cols=65 Identities=15% Similarity=0.196 Sum_probs=35.8
Q ss_pred ceeeecC--CCCCEEEEEeCCCccCHHHHHhhccceeecchHHHHHHHhcCCccccccccccceeEEEeec
Q psy16067 1224 QDPIIPN--KEEKTLTIIDSGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVA 1292 (1386)
Q Consensus 1224 ~I~I~~d--~~~~~L~I~DnGiGMt~~dl~~~LgtIa~Sgtk~f~e~~~~~~~~~~IGqFGIGF~S~FmVa 1292 (1386)
.|+|.+. .+.-.|+|+|+|.||+++++..-+-..-+..... . .........+-+|+|.+-|-.++
T Consensus 271 ~I~I~~~~~~~~v~i~V~D~G~GI~~e~~~~if~~f~~~~~~~---~-~~~~~~~~~~G~GLGL~Ivr~i~ 337 (407)
T 2q8g_A 271 PIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAPRP---R-VETSRAVPLAGFGYGLPISRLYA 337 (407)
T ss_dssp CEEEEEEECSSEEEEEEEECSCCCCHHHHGGGGCTTTTCCCCC---C-SSCCSCCCSSCTTCHHHHHHHHH
T ss_pred CEEEEEEeCCCEEEEEEEecCCCCCHHHHHHHhCccccCCCCC---C-ccccCCCCCCCcCCCHHHHHHHH
Confidence 4555554 4445789999999999998875543221110000 0 00011234567899987654433
No 75
>3a0y_A Sensor protein; ATP-LID, kinase, phosphoprotein, transferase, two-component regulatory system; 1.57A {Thermotoga maritima} PDB: 3a0t_A* 3a0x_A 3a0w_A 3a0z_A
Probab=44.55 E-value=7.1 Score=37.94 Aligned_cols=33 Identities=12% Similarity=0.142 Sum_probs=23.9
Q ss_pred CceeeecCCC--CCEEEEEeCCCccCHHHHHhhcc
Q psy16067 1223 GQDPIIPNKE--EKTLTIIDSGIGMTKADLVNNLG 1255 (1386)
Q Consensus 1223 G~I~I~~d~~--~~~L~I~DnGiGMt~~dl~~~Lg 1255 (1386)
|.|+|.+..+ .-.|+|+|||.||+.+++...+.
T Consensus 67 ~~I~i~~~~~~~~~~i~i~D~G~g~~~~~~~~~f~ 101 (152)
T 3a0y_A 67 GKIKITSEDMYTKVRVSVWNSGPPIPEELKEKIFS 101 (152)
T ss_dssp CEEEEEEEECSSEEEEEEEEESCCCCGGGTTGGGS
T ss_pred CEEEEEEEecCCEEEEEEEeCCCCcCHHHHHhHhh
Confidence 5677766443 34788999999999987765543
No 76
>1r62_A Nitrogen regulation protein NR(II); PII, histidine kinase, two component system, transfera; 1.60A {Escherichia coli} SCOP: d.122.1.3
Probab=44.15 E-value=5.3 Score=39.18 Aligned_cols=33 Identities=12% Similarity=0.089 Sum_probs=17.2
Q ss_pred CCceeeecCCC------------CCEEEEEeCCCccCHHHHHhhc
Q psy16067 1222 FGQDPIIPNKE------------EKTLTIIDSGIGMTKADLVNNL 1254 (1386)
Q Consensus 1222 ~G~I~I~~d~~------------~~~L~I~DnGiGMt~~dl~~~L 1254 (1386)
-|.|+|.+..+ .-.|+|+|||.||+.+++...+
T Consensus 68 ~~~I~i~~~~~~~~~~~~~~~~~~~~i~v~D~G~gi~~~~~~~lf 112 (160)
T 1r62_A 68 GGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTLF 112 (160)
T ss_dssp CEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECTTC---------
T ss_pred CCeEEEEEeccccccccccccccEEEEEEEeCCCCCCHHHHHHhh
Confidence 35677766433 3468899999999998776544
No 77
>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A
Probab=43.56 E-value=2.9 Score=45.37 Aligned_cols=67 Identities=61% Similarity=1.098 Sum_probs=49.1
Q ss_pred hhhhhccCCCCcccCCCC-CCCCCCcceeeehhhhhhHHHHHHHHHHHHHhhccccccchhhhhhHHH
Q psy16067 445 QYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEKE 511 (1386)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (1386)
.+.|+...+..+.+.+.. ..+...||.|.+++..+..+++++..+++++++.+.++++|+.+..+|.
T Consensus 145 ~~~~~~~~~~~~~i~~~~~~~~~~~GT~I~l~Lk~~~~~~~e~~~i~~~v~~~a~~l~~PI~~~~~~~ 212 (220)
T 2wer_A 145 QYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKE 212 (220)
T ss_dssp CEEEEECSSSEEEEEECSSSCCCSSEEEEEEEECTTCGGGGCHHHHHHHHHHHCTTCCSCEEECCCCC
T ss_pred eeEEEeCCCCceEeecccCCCCCCCCeEEEEEECcchHHhCCHHHHHHHHHHHHhcCCCceEEEeccc
Confidence 355776655566665542 2345678999999887766677888888999999999999998877553
No 78
>3zxq_A Hypoxia sensor histidine kinase response regulato; transferase; 1.90A {Mycobacterium tuberculosis}
Probab=43.41 E-value=3.9 Score=38.79 Aligned_cols=26 Identities=15% Similarity=0.325 Sum_probs=19.6
Q ss_pred Cceeeec--CCCCCEEEEEeCCCccCHHH
Q psy16067 1223 GQDPIIP--NKEEKTLTIIDSGIGMTKAD 1249 (1386)
Q Consensus 1223 G~I~I~~--d~~~~~L~I~DnGiGMt~~d 1249 (1386)
|+|+|.+ +.+ -.|+|+|||.||+.++
T Consensus 58 ~~i~i~~~~~~~-~~i~v~D~G~gi~~~~ 85 (124)
T 3zxq_A 58 TSLAINVSVEDD-VRVEVVDDGVGISGDI 85 (124)
T ss_dssp CEEEEEEEEEEE-EEEEEEECCCSSCGGG
T ss_pred CEEEEEEEeCCC-EEEEEEECCCCCCccc
Confidence 4566655 445 6889999999999865
No 79
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A*
Probab=35.93 E-value=5.4 Score=43.84 Aligned_cols=65 Identities=46% Similarity=0.784 Sum_probs=48.9
Q ss_pred hhhhhccCCCCcccCCCC-CCCCCCcceeeehhhhhhHHHHHHHHHHHHHhhccccccchhhhhhHH
Q psy16067 445 QYIWESSAGGSFTIKPDN-SEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLLVEK 510 (1386)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (1386)
.+.|+... ..+.+.+.. ..+...||.|.+++..+..+++++..++.++++.++++.+|+.+..+|
T Consensus 156 ~~~w~~~g-g~~~i~~~~~~~~~~~GT~I~l~Lk~~~~~~le~~~i~~lv~~~s~~i~~pI~~~~~~ 221 (236)
T 2gqp_A 156 QHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSK 221 (236)
T ss_dssp CEEEEESS-SCEEEEECTTCSCSSSEEEEEEEECGGGGGGGCHHHHHHHHHHHHTTCSSCEEEEEEC
T ss_pred eEEEEEeC-CEEEEEeccCCCCCCCCeEEEEEECCcchhhChHHHHHHHHHHHhhhCCCceEEeeee
Confidence 35687655 567666553 234567899999998877777788889999999999999998776544
No 80
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=32.68 E-value=12 Score=41.70 Aligned_cols=32 Identities=13% Similarity=0.134 Sum_probs=22.8
Q ss_pred CceeeecC--CCCCEEEEEeCCCccCHHHHHhhc
Q psy16067 1223 GQDPIIPN--KEEKTLTIIDSGIGMTKADLVNNL 1254 (1386)
Q Consensus 1223 G~I~I~~d--~~~~~L~I~DnGiGMt~~dl~~~L 1254 (1386)
|.|.|.+. .+.-.|+|+|||+||+.+++..-+
T Consensus 264 ~~i~i~~~~~~~~~~i~v~D~G~Gi~~~~~~~if 297 (349)
T 3a0r_A 264 GKIKITSEDMYTKVRVSVWNSGPPIPEELKEKIF 297 (349)
T ss_dssp CCEEEEEEEETTEEEEEEEEESCCCCGGGGTTTS
T ss_pred CEEEEEEEecCCEEEEEEEECCCCCChHHHhhcC
Confidence 45666554 444578899999999998765444
No 81
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A
Probab=31.55 E-value=6.8 Score=48.38 Aligned_cols=62 Identities=29% Similarity=0.641 Sum_probs=50.1
Q ss_pred chhhhhccCCCCcccCCCCCCCCCCcceeeehhhhhhHHHHHHHHHHHHHhhccccccchhhhh
Q psy16067 444 EQYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLL 507 (1386)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (1386)
+++.|++..+..+.+.+. +..+.||.|.+++..+..+++++..++.++++.++++++|+.+.
T Consensus 150 ~~~~w~s~g~~~~~i~~~--~~~~~GT~I~L~Lk~d~~Efle~~~I~~iv~kys~fi~~PI~~~ 211 (559)
T 1y4s_A 150 NGVFWESAGEGEYTVADI--TKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIE 211 (559)
T ss_dssp GEEEEEECSSSEEEEEEE--CCCSCEEEEEEEECTTCGGGSCHHHHHHHHHHHHTTCSSCEEEE
T ss_pred eeEEEEEeCCCeeEEeEC--CCCCCCeEEEEEEcchhhhcchHHHHHHHHHHHhccCCCceEEe
Confidence 357798877777877754 23468899999999888888888889999999999999998763
No 82
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A
Probab=28.52 E-value=9.8 Score=47.58 Aligned_cols=61 Identities=30% Similarity=0.646 Sum_probs=49.7
Q ss_pred hhhhhccCCCCcccCCCCCCCCCCcceeeehhhhhhHHHHHHHHHHHHHhhccccccchhhhh
Q psy16067 445 QYIWESSAGGSFTIKPDNSEPLGRGTKIVLHMKEDQAEYIEEKKIKEIVKKHSQFIGYPIKLL 507 (1386)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (1386)
.+.|++..+..+.+.+. +..+.||.|.+++..+..+++++..++.++++.++++++|+.+.
T Consensus 151 ~~~w~s~g~~~~~i~~~--~~~~~GT~I~L~Lk~d~~Efl~~~~i~~ivkkys~fi~~PI~~~ 211 (624)
T 2ioq_A 151 GVFWESAGEGEYTVADI--TKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIE 211 (624)
T ss_dssp EEEEEECSSSCCEEEEE--CCSSSEEEEEEEECTTCGGGGCHHHHHHHHHHHHTTCSSCEEEE
T ss_pred eEEEEEeCCCeEEEEEC--CCCCCCeEEEEEEcchhhhcchHHHHHHHHHHHhccCCCceEEe
Confidence 56798877777877754 23468999999999888888888999999999999999998663
Done!