BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1607
(241 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|345490923|ref|XP_003426495.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 346
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 113/203 (55%), Gaps = 7/203 (3%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L L QVF++P ++ L+ D+ACG+DH L L ++G V+S G G+RGQLG+ +
Sbjct: 145 LTNLGQVFNIPISLNDPESLIFIDVACGYDHTLLLAKDGGVYSVGMGTRGQLGH--GDLE 202
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
EP+ I AL+GL +VQIS+GGWHSA T G LY WGWNN GQ+G ++ VV P
Sbjct: 203 DCDEPKLIEALAGLKIVQISSGGWHSAVVTDQGDLYTWGWNNQGQLG-HPDVENVVAVPK 261
Query: 130 PMSW-SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC-GVSQVSVMT 187
+ + E ++ I + CGS T+ + D + LWGCG N+Y QL + + V
Sbjct: 262 IVDFIDETEETVEINIKKAQCGSAFTICMTDSDKLWGCGSNKYGQLGLPREAFTSVKKFV 321
Query: 188 RLSVPEHVKNCPIVKLFAEHWNS 210
+ +P K PI W S
Sbjct: 322 AIKLPNIEK--PIRDFKCREWGS 342
>gi|307172226|gb|EFN63743.1| RCC1 domain-containing protein 1 [Camponotus floridanus]
Length = 344
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L L +VF+ P + + D+ CG+DH + L + G V+S G G RGQLG+ + +
Sbjct: 140 LTNLGRVFNAPLLVQMPKRVKFVDLVCGYDHTILLAENGDVYSMGMGIRGQLGH--NELE 197
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+P+ I AL+GL +VQISAGGWHSAA T G LY WGWN+ G++G+E K V P
Sbjct: 198 NCDDPKLIEALAGLKIVQISAGGWHSAAVTDQGDLYTWGWNSNGELGIESKDKKVYAVPT 257
Query: 130 PMSWSEDF-DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + D ++ I V V CG+ T+ L DD S WGCG N+Y QL
Sbjct: 258 LVDFKNDRGETIEINVKKVECGNSFTICLTDDGSFWGCGTNKYGQL 303
>gi|242011327|ref|XP_002426404.1| uvb-resistance protein uvr8, putative [Pediculus humanus corporis]
gi|212510503|gb|EEB13666.1| uvb-resistance protein uvr8, putative [Pediculus humanus corporis]
Length = 357
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 4/165 (2%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQISAG 91
++ G +H L LT+ G V S+GNGSRGQLG +GT ++ +P +I AL GL V+ I+AG
Sbjct: 175 NVVSGLEHSLILTESGCVLSFGNGSRGQLG---NGTLNSIDQPSQIPALEGLKVINIAAG 231
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
WHS A T G L WGWNN GQ+ + + P+ + +NIKVVDV+CGS
Sbjct: 232 NWHSFAITDSGDLCGWGWNNYGQLATFEDDEEITLAAEPIFVEIITEEENIKVVDVSCGS 291
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
RHT+A D+ L+G GWN Y QL + + + + T++S+ + K
Sbjct: 292 RHTIAKIDNGDLYGTGWNVYRQLGINSDLEKTTKFTKVSLINNQK 336
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
L +G L + Q PS++ L V +IA G H A+T G + WG + GQL
Sbjct: 202 QLGNGTLNSIDQ----PSQIPALEGLKVINIAAGNWHSFAITDSGDLCGWGWNNYGQLAT 257
Query: 64 PSSGTDANM--EPREIRALS---GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
+ + EP + ++ + VV +S G H+ A+ +G LY GWN Q+G+
Sbjct: 258 FEDDEEITLAAEPIFVEIITEEENIKVVDVSCGSRHTIAKIDNGDLYGTGWNVYRQLGIN 317
Query: 119 GKLD 122
L+
Sbjct: 318 SDLE 321
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 31/165 (18%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
K+ ++ + S + H +DL + + L G V++ N + Q+ Y +
Sbjct: 123 KIWKEIDNKVSIISHRIDL---------NSFILLLSNGSVWTLSNDDKLQIIY------S 167
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
N+ + I +SGL HS T+ G + ++G + GQ+G G L+ + P
Sbjct: 168 NISEKAINVVSGLE---------HSLILTESGCVLSFGNGSRGQLG-NGTLN-SIDQPSQ 216
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
+ E +KV+++A G+ H+ A+ D L G GWN Y QL+
Sbjct: 217 IPALE-----GLKVINIAAGNWHSFAITDSGDLCGWGWNNYGQLA 256
>gi|332018112|gb|EGI58726.1| RCC1 domain-containing protein 1 [Acromyrmex echinatior]
Length = 345
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L L +VF+ P ++ + D+ CGFDH + L + G V+S G G RGQLG+
Sbjct: 140 LTNLGRVFNAPLLVEIPKRVKFVDLTCGFDHTILLAENGDVYSMGMGIRGQLGHNELENC 199
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
N P+ I AL+GL VVQISAGGWH+A T G LY WGWN+ G++G+E K V P
Sbjct: 200 DN--PKLIEALAGLKVVQISAGGWHTAVVTDQGDLYTWGWNSNGELGIENKDKKVYAVPT 257
Query: 130 PMSWSEDF-DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + D ++ I V V CG+ T+ L DD WGCG N+Y QL
Sbjct: 258 LIDFKNDRGENIEINVKKVECGNSFTICLTDDGFFWGCGTNKYGQL 303
>gi|340725486|ref|XP_003401100.1| PREDICTED: RCC1 domain-containing protein 1-like isoform 1 [Bombus
terrestris]
gi|340725488|ref|XP_003401101.1| PREDICTED: RCC1 domain-containing protein 1-like isoform 2 [Bombus
terrestris]
Length = 347
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 103/185 (55%), Gaps = 4/185 (2%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L L + F++P +D + DIA GFDH + L + G V+S G G+RGQLG+
Sbjct: 144 LTNLGRAFNVPILIDIPKRVRFIDIAGGFDHTILLAENGDVYSMGMGTRGQLGHNDLEDC 203
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
N PR + AL+G+ V QISA GWH+A T G LY WGWN G++G+ + VV P
Sbjct: 204 DN--PRIVDALAGIRVTQISAAGWHTAVVTDQGDLYMWGWNTNGELGLTKQESKVVATPT 261
Query: 130 PMSWSEDFDSQ-NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC-GVSQVSVMT 187
+ ++ D D + V V CG+ T+ + DD +LWGCG N+Y QL +S S
Sbjct: 262 LIDFTNDQDENIEVSVKKVQCGNTFTICMTDDGTLWGCGCNKYGQLGQSPEKLSSSSKFV 321
Query: 188 RLSVP 192
+L VP
Sbjct: 322 KLDVP 326
>gi|307214559|gb|EFN89544.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 346
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 95/166 (57%), Gaps = 3/166 (1%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L L +VF+ P ++ + DIA GFDH + L + G V+S G G+RGQLG+
Sbjct: 142 LTNLGRVFNAPVLVEVPKRVKFVDIASGFDHTILLAENGDVYSMGMGTRGQLGHNDLEDC 201
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
N PR I AL+GL +VQISAGGWHSA T G LY WGWN G++G E K V P
Sbjct: 202 DN--PRLIEALAGLRIVQISAGGWHSAVVTDQGDLYTWGWNTSGELGTESKDTKVHAVPT 259
Query: 130 PMSW-SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ S + + + V V CG+ T+ L DD S WGCG N+Y QL
Sbjct: 260 LIDLKSNEGEDTEVNVKSVECGNSFTICLSDDGSFWGCGNNKYGQL 305
>gi|350415154|ref|XP_003490550.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus
impatiens]
Length = 347
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 103/185 (55%), Gaps = 4/185 (2%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L L + F++P +D + DIA GFDH + L + G ++S G G+RGQLG+
Sbjct: 144 LTNLGRAFNVPILIDIPKRVRFIDIAGGFDHTILLAENGDIYSMGMGTRGQLGHNDLEDC 203
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
N PR + AL+G+ V QISA GWH+A T G LY WGWN G++G+ + VV P
Sbjct: 204 DN--PRIVDALAGIKVTQISAAGWHTAVVTDQGDLYMWGWNTHGELGLTKQESKVVATPT 261
Query: 130 PMSWSEDFDSQ-NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC-GVSQVSVMT 187
+ ++ D D + V V CG+ T+ + DD +LWGCG N+Y QL +S S
Sbjct: 262 LVDFTNDQDENIEVSVKKVQCGNTFTICMTDDGTLWGCGCNKYGQLGQSPEKLSSSSKFI 321
Query: 188 RLSVP 192
+L VP
Sbjct: 322 KLDVP 326
>gi|328783317|ref|XP_394080.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 345
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L L +VF++P+ +D + DIACGFDH + L + G ++S G G+RGQLG+
Sbjct: 142 LTNLGRVFNIPTLIDIPKRVRFIDIACGFDHTILLAENGDLYSMGMGTRGQLGHNDLEDC 201
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
N P+ + AL+G+ V QISA GWHSA T G LY WGWN G++G+ + V+ P
Sbjct: 202 DN--PKLVEALAGIKVTQISAAGWHSAVVTNQGDLYTWGWNTNGELGLTDQESKVIAVPT 259
Query: 130 PMSWSEDF-DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ ++ D +S I V CG+ T+ + +D + WGCG N+Y QL
Sbjct: 260 LIDFTNDKNESVEIFVEKAQCGNTFTICMTNDGTFWGCGCNKYGQL 305
>gi|328714818|ref|XP_003245463.1| PREDICTED: RCC1 domain-containing protein 1-like [Acyrthosiphon
pisum]
Length = 371
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 115/207 (55%), Gaps = 15/207 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++++ +P+++ VT + CGF+H + L + G +++ G+ SRGQLG+ +
Sbjct: 170 NEIYSIPTKIFDS-KFKVTQVVCGFEHIVILMETGCLYTQGSSSRGQLGHGELIEED--Y 226
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL--VVHDPHP- 130
PR +++L G+ V+ SAGGWH+AA T+ LY WGWN+ GQ+G+ + ++ P P
Sbjct: 227 PRLLKSLDGIRVINTSAGGWHTAAITEYNDLYMWGWNHSGQLGISNSPESGGIIMAPEPV 286
Query: 131 -MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
++W E+ D + V+ G+RH++ L +N LWGCGWN + QL + M L
Sbjct: 287 LINWPEETD-----IEQVSLGARHSMVLSKNNILWGCGWNAHKQLGIETYQLTCDRMINL 341
Query: 190 SVPEHVKNC---PIVKLFAEHWNSARL 213
S + C IVK+ WNSA L
Sbjct: 342 SNLSPLLKCNVRKIVKVVCGAWNSALL 368
>gi|357601928|gb|EHJ63196.1| hypothetical protein KGM_14591 [Danaus plexippus]
Length = 375
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 94/154 (61%), Gaps = 11/154 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
V DI CG++H + LT EG V++WGNG R QLG+ G N+E P E+ AL+G+ +V+I
Sbjct: 187 VCDIVCGYEHYMLLTDEGRVYTWGNGRRLQLGH---GDLTNLELPTEVEALAGIKIVKIR 243
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGK-------LDLVVHDPHPMSWSEDFDSQNI 142
AGGWHS A + G LY WGWN+ GQ+G+E K L + E+ ++
Sbjct: 244 AGGWHSLALSDCGDLYLWGWNDTGQLGMENKGGQEKKGLKNYTLPTLVDVYDENDQLVDL 303
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
V D+ACG+RHT L +DN++W G N+Y QL +
Sbjct: 304 CVKDIACGTRHTALLLEDNTVWTSGCNKYGQLGL 337
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 24 DHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
D +DL V DIACG H L ++ V++ G GQLG P + +++
Sbjct: 298 DQLVDLCVKDIACGTRHTALLLEDNTVWTSGCNKYGQLGLPPERHEKIESFKKV--FYDE 355
Query: 84 GVVQISAGGWHSAARTQ 100
G+ IS G W + Q
Sbjct: 356 GITNISCGPWSTVVELQ 372
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 12/113 (10%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR- 75
+P+ ++ + + I G H LAL+ G ++ WG GQLG + G +
Sbjct: 225 LELPTEVEALAGIKIVKIRAGGWHSLALSDCGDLYLWGWNDTGQLGMENKGGQEKKGLKN 284
Query: 76 -----------EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
E L L V I+ G H+A +D ++ G N GQ+G+
Sbjct: 285 YTLPTLVDVYDENDQLVDLCVKDIACGTRHTALLLEDNTVWTSGCNKYGQLGL 337
>gi|322801013|gb|EFZ21794.1| hypothetical protein SINV_09385 [Solenopsis invicta]
Length = 354
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 97/176 (55%), Gaps = 13/176 (7%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L L +VF+ P + + D+ACGFDH + L + G V+S G G RGQLG+
Sbjct: 140 LTNLGRVFNAPLLAEIPKRVRFVDLACGFDHTILLAENGDVYSMGMGIRGQLGHNELEDC 199
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
N P+ I AL+GL V+QISAGGWHSA T G LY WGWN+ G++G+E K V P
Sbjct: 200 EN--PKLIEALAGLKVIQISAGGWHSAVITDQGDLYTWGWNSNGELGIESKDKKVYAVPT 257
Query: 130 PMSWSEDF-DSQNIKVVDVACGSRHTLALC----------DDNSLWGCGWNEYNQL 174
+ + D ++ + V V CG+ T+ L DD+ WGCG N+Y QL
Sbjct: 258 LIDFKNDRGETIEVNVKKVECGNCFTVCLTEKKVMSVSSLDDSCFWGCGANKYGQL 313
>gi|383858545|ref|XP_003704761.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Megachile rotundata]
Length = 343
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 117/212 (55%), Gaps = 16/212 (7%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L L +VF++P+ ++ + ++ACGFDH + L Q G ++S G G+RGQLG+
Sbjct: 140 LTNLGRVFNVPTLVEMPKRVQFVNVACGFDHTILLAQNGDIYSLGMGTRGQLGH------ 193
Query: 70 ANME----PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
++E P+ I AL+G+ V ISA G HSA T+ G LY WGWN G++G+ + VV
Sbjct: 194 GDLEDCDSPKLIEALAGIKVTHISAAGSHSAVVTEQGDLYTWGWNTNGELGLPNQESKVV 253
Query: 126 HDPHPMSWSEDFDSQNIK--VVDVACGSRHTLALCDDNSLWGCGWNEYNQL-SMGCGVSQ 182
P + +++D ++N++ V V CG+ T+ + DD +LWG G N+Y QL + +
Sbjct: 254 AVPTLVDFTDD-QNKNVETFVKKVECGNNFTICMMDDGTLWGSGCNKYGQLGQLRESLLN 312
Query: 183 VSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
+L VP +K IV W + ++
Sbjct: 313 TPKFVKLKVPFDLK--KIVNFKCREWGTVLIT 342
>gi|270013420|gb|EFA09868.1| hypothetical protein TcasGA2_TC012016 [Tribolium castaneum]
Length = 294
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 99/160 (61%), Gaps = 8/160 (5%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
++++P++++ F+ + ++ G +HCL L + G VFS+G GSRGQLG+ D EP+
Sbjct: 126 LYNVPNKLE-FVSGDIIEVKTGREHCLLLDKSGNVFSFGRGSRGQLGHGC--LDDESEPK 182
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I AL G+ + I AGGWHS A +++G LY WGWN GQ+G+ G D V P
Sbjct: 183 FIEALGGVKIEAIEAGGWHSCALSKEGDLYVWGWNGSGQLGLGGSDDGVSIMATPQVLDF 242
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
DF NIK V CG++HT+ L D+ L+GCGWN+Y QL
Sbjct: 243 DF---NIK--KVGCGNKHTVVLTDEGKLFGCGWNKYKQLK 277
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 42/217 (19%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
LK+ V +P M D V I+ G C+ALT++G++++
Sbjct: 86 LKITESVIKVPKLMGLDDDDTVVQISTGSKLCVALTKKGLLYNV---------------- 129
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
P ++ +SG ++++ G H + G ++++G + GQ+G G LD D
Sbjct: 130 ----PNKLEFVSG-DIIEVKTGREHCLLLDKSGNVFSFGRGSRGQLG-HGCLD----DES 179
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ E +K+ + G H+ AL + L+ GWN QL +G VS+M
Sbjct: 180 EPKFIEALGG--VKIEAIEAGGWHSCALSKEGDLYVWGWNGSGQLGLGGSDDGVSIMATP 237
Query: 190 SVPEHVKNCPIV--------------KLFAEHWNSAR 212
V + N V KLF WN +
Sbjct: 238 QVLDFDFNIKKVGCGNKHTVVLTDEGKLFGCGWNKYK 274
>gi|260826736|ref|XP_002608321.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
gi|229293672|gb|EEN64331.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
Length = 364
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 108/226 (47%), Gaps = 32/226 (14%)
Query: 7 SGPLKMLSQVFHM-PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
+G + ML V P+ + +L V + CG +H LALT G VFSWGNGSRGQLG+ +
Sbjct: 141 TGDITMLGDVQSTNPTPLPVYLGEKVKAVCCGKEHSLALTLSGRVFSWGNGSRGQLGHGT 200
Query: 66 SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
T+A+ P+ I AL G+ +V I+AGGWHS + + G LY WGWN GQ+G+
Sbjct: 201 --TEASNTPQVIEALEGVTMVTIAAGGWHSVSVSAFGDLYVWGWNEAGQLGLPTSKHKTG 258
Query: 126 HDPHPMSWSE-DFDSQNI------------------KVVDVACGSRHTLALCDDNSLWGC 166
H S SE N+ +V V+CGSRHT AL D L
Sbjct: 259 PSDHKPSISEMGHQGDNVAEVLVQATPTIVDMPAGQEVSKVSCGSRHTAALTRDGQLLTW 318
Query: 167 GWNEYNQLSMGCGVSQVSVMTRLSVP---EHVKNCPIVKLFAEHWN 209
GW Y QL G R VP E K + ++ WN
Sbjct: 319 GWGAYGQLGNG-------QTERCEVPRAVEFFKQRKVTNVWCGPWN 357
>gi|443692774|gb|ELT94295.1| hypothetical protein CAPTEDRAFT_179088 [Capitella teleta]
Length = 394
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 40/194 (20%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+++ ++CG +H + L++ GIVF++G+GSRGQLG+ + ++ +P+++ AL G+ + +
Sbjct: 175 ILIKSVSCGHEHTILLSKIGIVFTFGSGSRGQLGHGT--IESQTQPQKVAALEGMSMTSV 232
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH------------------P 130
SAGGWHSAA + G +Y WGWN GQ+G K + +P P
Sbjct: 233 SAGGWHSAALSDIGDIYTWGWNERGQLGARSKGVKMKVEPESIESVRPAKIQKTQTGGIP 292
Query: 131 MSWS--------------------EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
++ ED + + + D+ACGSRH+ A+ DD SL+ G N+
Sbjct: 293 SNYKDEEVNVETVNVQSIPSVLDVEDENHELLSFKDIACGSRHSAAVTDDGSLYSWGCND 352
Query: 171 YNQLSMGCGVSQVS 184
Y QL +G +S+ S
Sbjct: 353 YGQLGLGDRISRDS 366
>gi|321468288|gb|EFX79274.1| hypothetical protein DAPPUDRAFT_104548 [Daphnia pulex]
Length = 202
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 85/145 (58%), Gaps = 13/145 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PSRM++ + V IA G +H +AL EG V+SWG+GSRGQLG+ S ++N P+EI
Sbjct: 55 PSRMENMQSVFVA-IASGKEHFIALNSEGKVYSWGSGSRGQLGHGS--IESNEYPQEIEV 111
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVH-----DPH 129
L G+ +VQI+AGGWHS A ++ G +Y WGWN GQ+G + G H +P
Sbjct: 112 LGGIKIVQIAAGGWHSCALSESGDVYVWGWNESGQLGLPCRNLSGSASKSEHVSIQSEPR 171
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHT 154
+ + F V ++CGSRHT
Sbjct: 172 LLDHAMPFSLDEANVTSISCGSRHT 196
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
V I++G H A +G +Y+WG + GQ+G G ++ + +P E IK+V
Sbjct: 66 VAIASGKEHFIALNSEGKVYSWGSGSRGQLG-HGSIE---SNEYPQ---EIEVLGGIKIV 118
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
+A G H+ AL + ++ GWNE QL + C
Sbjct: 119 QIAAGGWHSCALSESGDVYVWGWNESGQLGLPC 151
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S P + L + IACG HCLA+T +G V SWG GQLG + T+ ++
Sbjct: 106 SSDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT--TEDSLV 163
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I+A G+ V ++AG H+AA T+DG LY WGW G +G+ + D +V P +S
Sbjct: 164 PQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV--PEKVST 221
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E +K+V VACG RHT+++ L+ GW++Y QL G
Sbjct: 222 VE-----GVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHG 260
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 93/186 (50%), Gaps = 17/186 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+ + V + CG DH A ++ V+SWG G G+LG+ +S +D P+ I+
Sbjct: 59 PTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNS-SDL-FTPQPIK 116
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL GL + QI+ G H A T DG + +WG N GQ+G+ D +V P + + F
Sbjct: 117 ALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV--PQKI---QAF- 170
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
Q + V VA G+ HT A+ +D L+G GW Y L +G RL VPE V
Sbjct: 171 -QGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLG------DRNDRL-VPEKVSTV 222
Query: 199 PIVKLF 204
VK+
Sbjct: 223 EGVKMV 228
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 17/163 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + + +ACG+ H ++++ G ++++G GQLG+ + ++ P ++
Sbjct: 215 VPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGD--FEDHLTPHKLE 272
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD----LVVHDPHPMSWS 134
AL + +IS G H+ A T DG LY WGWN GQVGV +D + V PH
Sbjct: 273 ALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ--- 329
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
KVV ++CG RHTLA+ + +++ G QL G
Sbjct: 330 --------KVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHG 364
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL +V SWG G GQLG+ + + + P + AL G VV ++ G
Sbjct: 21 ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDA--EDRLSPTYLSALDGHEVVSVTCGAD 78
Query: 94 HSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A ++ +Y+WGW + G++G DL P P+ +++ +ACG
Sbjct: 79 HTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFT--PQPIK-----ALHGLRIKQIACGDS 131
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGC 178
H LA+ D + G N+ QL +G
Sbjct: 132 HCLAVTMDGEVQSWGRNQNGQLGLGT 157
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG 84
V I+CG+ H LA+T+ VFSWG G+ GQLG+ S D N+ P+ I LS G
Sbjct: 331 VVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGES-IDRNI-PKMIEVLSADG 382
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 91/158 (57%), Gaps = 9/158 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + IACG HCLA+T +G V SWG GQLG + T+ ++ P++I+A
Sbjct: 100 PQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT--TEDSLVPQKIQA 157
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
G+ V ++AG H+AA T+DG LY WGW G +G+ + D +V P +S E
Sbjct: 158 FQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV--PEKVSTVE---- 211
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+K+V VACG RHT+++ L+ GW++Y QL G
Sbjct: 212 -GVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHG 248
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 17/163 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + + +ACG+ H ++++ G ++++G GQLG+ + ++ P ++
Sbjct: 203 VPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGD--FEDHLTPHKLE 260
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD----LVVHDPHPMSWS 134
AL + +IS G H+ A T DG LY WGWN GQVGV +D + V PH
Sbjct: 261 ALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ--- 317
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
KVV ++CG RHTLA+ + +++ G QL G
Sbjct: 318 --------KVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHG 352
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 31 VTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V + CG DH A ++ V+SWG P+ I+AL GL + QI+
Sbjct: 70 VVSVTCGADHTTAYSESFTQVYSWGCDL--------------FTPQPIKALHGLRIKQIA 115
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H A T DG + +WG N GQ+G+ D +V P + + F Q + V VA
Sbjct: 116 CGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV--PQKI---QAF--QGVSVKMVAA 168
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLF 204
G+ HT A+ +D L+G GW Y L +G RL VPE V VK+
Sbjct: 169 GAEHTAAVTEDGELYGWGWGRYGNLGLG------DRNDRL-VPEKVSTVEGVKMV 216
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG 84
V I+CG+ H LA+T+ VFSWG G+ GQLG+ S D N+ P+ I LS G
Sbjct: 319 VVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGES-IDRNI-PKMIEVLSADG 370
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 89/161 (55%), Gaps = 9/161 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
P + L + IACG HCLA+T EG V SWG GQLG + T+ ++ P++
Sbjct: 107 LFTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGT--TEDSLVPQK 164
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I+A G+ + ++AG H+AA T+DG LY WGW G +G+ + D +V + + E
Sbjct: 165 IQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGE- 223
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
K+V VACG RHT+++ L+ GW++Y QL G
Sbjct: 224 ------KMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHG 258
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 11/178 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+ + L + + CG DH +A ++ V+SWG G G+LG+ +S +D P+ IR
Sbjct: 57 PTILSTLEGLEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNS-SDL-FTPQPIR 114
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L GL + QI+ G H A T +G + +WG N GQ+G+ D +V P + + F
Sbjct: 115 QLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLV--PQKI---QAFQ 169
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
IK+ VA G+ HT A+ +D L+G GW Y L +G ++ V ++S+P K
Sbjct: 170 GVPIKM--VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRL-VPEKVSLPHGEK 224
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG+ H ++++ G ++++G GQLG+ ++ P ++ AL G + QIS G
Sbjct: 228 VACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYAD--HLIPHQLEALQGSFISQISGGWR 285
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ A T DG LY WGWN GQVGV +D P+ + KV+ ++CG RH
Sbjct: 286 HTMAVTSDGKLYGWGWNKFGQVGVGDNVD----RSSPVQVKLPLEQ---KVILISCGWRH 338
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG-CGVSQVSVMTR 188
TLA+ + +++ G QL G C V V+ +
Sbjct: 339 TLAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIK 374
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ L+ V I+CG+ H LA+T+ VFSWG G+ GQLG TD N+ P I+A
Sbjct: 318 PVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGEC-TDRNV-PVIIKA 375
Query: 80 LS 81
LS
Sbjct: 376 LS 377
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ ++ I+ G+ H +A+T +G ++ WG GQ+G + ++ P +++
Sbjct: 265 IPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSS--PVQVK 322
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
V+ IS G H+ A T+ +++WG GQ+G
Sbjct: 323 LPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLG 360
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 93/164 (56%), Gaps = 10/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S VF P + L + IACG HCLA+T G V SWG GQLG + T+ ++
Sbjct: 105 SDVF-TPQPVKALQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGT--TEDSLL 161
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I+A G+ V I+AG H+AA T+DG LY WGW G +G+ + D ++ P +S
Sbjct: 162 PQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL--PEKVSS 219
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E K+V VACG RHT+ + D +L+ GW++Y QL G
Sbjct: 220 VE-----GEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHG 258
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + +ACG+ H + ++ G ++++G GQLG+ + ++ P ++
Sbjct: 213 LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGH--GDFEDHLVPHKLE 270
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD----LVVHDPHPMSWS 134
AL + QIS G H+ A T +G LY WGWN GQVGV D + VH P
Sbjct: 271 ALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFP------ 324
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ K+ VACG RHTLAL + +++ G QL G
Sbjct: 325 -----EDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNG 362
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V ++ G H +AL ++ SWG G GQLG+ + + + P + G+ +
Sbjct: 15 TVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDA--EDRLVPTVLSGFDAPGITSVI 72
Query: 90 AGGWHSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++D +Y+WGW + G++G D V P P+ Q +K+ +A
Sbjct: 73 CGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSD--VFTPQPVK-----ALQGLKIKQIA 125
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG H LA+ + G N+ QL +G
Sbjct: 126 CGDSHCLAVTMAGQVQSWGRNQNGQLGLG 154
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 92/158 (58%), Gaps = 9/158 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + IACG HCLA+T EG V SWG GQLG + T+ ++ P++I+A
Sbjct: 104 PKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT--TEDSLVPQKIQA 161
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
G+ + ++AG H+AA T+DG L+ WGW G +G+ + D +V P +S S D D
Sbjct: 162 FEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLV--PQKVS-SVDGD- 217
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
K+V VACG RHT+++ L+ GW++Y QL G
Sbjct: 218 ---KMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHG 252
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 9/153 (5%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG+ H ++++ G ++++G GQLG+ + + P + AL G + QIS G
Sbjct: 222 VACGWRHTISVSSLGGLYTYGWSKYGQLGHGD--FEDRLVPHRLEALRGDNISQISGGWR 279
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ A T DG LY WGWN GQVG +D P + + +D KV+ ++CG RH
Sbjct: 280 HTMALTTDGKLYGWGWNKFGQVGAGDNIDHC--SPIQIKFPQDQ-----KVIQISCGWRH 332
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
TLA+ D +++ G QL G V + + M
Sbjct: 333 TLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPM 365
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 10/159 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALT-QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+++ + + CG DH A + V+SWG G G+LG+ +S +D + P+ I+
Sbjct: 51 PTQLSALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNS-SDL-LTPKPIK 108
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL GL + QI+ G H A T +G + +WG N GQ+G+ D +V P + + F+
Sbjct: 109 ALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV--PQKI---QAFE 163
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+IK+ VA G+ HT A+ +D L+G GW Y L +G
Sbjct: 164 GISIKM--VAAGAEHTAAVTEDGELFGWGWGRYGNLGLG 200
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL IV SWG G GQLG+ + + + P ++ AL G +V ++ G
Sbjct: 13 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDA--EDRLSPTQLSALDGHEIVSVTCGAD 70
Query: 94 H----SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
H S ART+ +Y+WGW + G++G DL+ P P+ +K+ +AC
Sbjct: 71 HTTAYSVARTE---VYSWGWGDFGRLGHGNSSDLLT--PKPIK-----ALHGLKIRQIAC 120
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
G H LA+ + + G N+ QL +G
Sbjct: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGT 149
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P R++ ++ I+ G+ H +ALT +G ++ WG GQ+G + + P +I+
Sbjct: 259 VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVG--AGDNIDHCSPIQIK 316
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
V+QIS G H+ A T +++WG GQ+G
Sbjct: 317 FPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLG 354
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D V I+CG+ H LA+T + VFSWG G+ GQLG+ S D N P + A
Sbjct: 312 PIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGES-VDRNT-PMILEA 369
Query: 80 LS 81
LS
Sbjct: 370 LS 371
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 93/164 (56%), Gaps = 10/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S VF+ P + + +T IACG HCLA+T G V SWG GQLG + T+ ++
Sbjct: 115 SDVFN-PQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGN--TEDSLL 171
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I+A G+ V I+AG H+AA T+DG LY WGW G +G+ + D ++ P +S
Sbjct: 172 PQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLI--PEKVS- 228
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
K+V VACG RHT+ + S++ GW++Y QL G
Sbjct: 229 ----SVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHG 268
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 9/159 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + +ACG+ H + ++ G ++++G GQLG+ + ++ P ++
Sbjct: 223 IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGD--FEDHLVPHKLE 280
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL + QIS G H+ A DG LY WGWN GQVGV D H +F
Sbjct: 281 ALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNED------HCSPVQVNFP 334
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ KVV VACG RHTLAL + +++ G QL G
Sbjct: 335 NEQ-KVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHG 372
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-------RALSGLGVV 86
I+ G H +AL G+V SWG G GQLG+ DA P A G+ V
Sbjct: 25 ISAGASHSVALLSGGVVCSWGRGEDGQLGH----GDAEDRPVPTVLTAAFDDAPGGVASV 80
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
I +A ++ LY+WGW + G++G D V +P P+ Q +++
Sbjct: 81 VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD--VFNPQPIQ-----ALQGVRITQ 133
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ACG H LA+ + G N+ QL +G
Sbjct: 134 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLG 164
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ + V +ACG+ H LALT+ VFSWG G+ GQLG+ D N+ P+ I A
Sbjct: 328 PVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEI-VDRNI-PKMIDA 385
Query: 80 LSGLG 84
LS G
Sbjct: 386 LSSDG 390
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV ISAG HS A G + +WG GQ+G D P P + FD V
Sbjct: 22 VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDR----PVPTVLTAAFDDAPGGV 77
Query: 145 VDVA-CGSRHTLALCDDN-SLWGCGWNEYNQLSMG 177
V CG+ HT A D+ L+ GW ++ +L G
Sbjct: 78 ASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHG 112
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S VFH P ++ + + IACG HCLA+T G V SWG GQLG T+ ++
Sbjct: 112 SDVFH-PQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGL--GNTEDSLL 168
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I A G+ V I+AG H+AA +DG LY WGW G +G+ + D +V P +S
Sbjct: 169 PQKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLV--PEKVSS 226
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E K+V VACG RHT+ + L+ GW++Y QL G
Sbjct: 227 VE-----GEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHG 265
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + +ACG+ H + ++ G ++++G GQLG+ + ++ P ++
Sbjct: 220 VPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGH--GDFEDHLVPHKLE 277
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL + QI+ G H+ A DG LY WGWN GQVGV +D H F
Sbjct: 278 ALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVD------HCSPVQVIFP 331
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ KV VACG RHTLAL ++ +++ G QL G
Sbjct: 332 DEQ-KVAQVACGWRHTLALTENKNVFSWGRGTSGQLGHG 369
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQI 88
V ++ G +H +AL V SWG G GQLG+ + E R + LSG V I
Sbjct: 21 TVALVSAGANHSVALLSSKAVCSWGRGEDGQLGH------GDAEDRPVPTLLSGFDVPGI 74
Query: 89 SA----GGWHSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
++ G H+ A + + LY+WGW + G++G G V H P P+ Q IK
Sbjct: 75 ASVVICGADHTTAYSDEQMQLYSWGWGDFGRLG-HGNSSDVFH-PQPIE-----ALQGIK 127
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +ACG H LA+ D + G N+ QL +G
Sbjct: 128 IKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLG 161
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS 81
V +ACG+ H LALT+ VFSWG G+ GQLG+ D N P+ I ALS
Sbjct: 336 VAQVACGWRHTLALTENKNVFSWGRGTSGQLGHGEI-IDRNT-PKMIDALS 384
>gi|391344575|ref|XP_003746571.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 293
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+L + IA G H +AL+ EG VF +G+GSRGQ G S A+ E R + L L +
Sbjct: 120 ELRCSRIAAGLGHLVALSTEGKVFVYGDGSRGQRG--SGDLSADEELRPLAHLEDLDITH 177
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQV-GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
+SAGGWHSAA + G+LY WGWN GQ G G VV P + I++ D
Sbjct: 178 VSAGGWHSAAISDRGYLYQWGWNQHGQCGGPRGDSRNVVGLP-------ELRDVGIRLRD 230
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLS 175
V CGSRHT+ L DD L GW+++ Q S
Sbjct: 231 VRCGSRHTVVLTDDGRLLSWGWDDFGQCS 259
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 23 MDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG 82
+ H DL +T ++ G H A++ G ++ WG GQ G P + + E+R + G
Sbjct: 167 LAHLEDLDITHVSAGGWHSAAISDRGYLYQWGWNQHGQCGGPRGDSRNVVGLPELRDV-G 225
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQ 114
+ + + G H+ T DG L +WGW++ GQ
Sbjct: 226 IRLRDVRCGSRHTVVLTDDGRLLSWGWDDFGQ 257
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 93/164 (56%), Gaps = 10/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S VF+ P + + +T IACG HCLA+T G V SWG GQLG + T+ ++
Sbjct: 120 SDVFN-PQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGN--TEDSLL 176
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I+A G+ V I+AG H+AA T+DG LY WGW G +G+ + D ++ P +S
Sbjct: 177 PQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLI--PEKVS- 233
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
K+V VACG RHT+ + S++ GW++Y QL G
Sbjct: 234 ----SVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHG 273
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 9/159 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + +ACG+ H + ++ G ++++G GQLG+ + ++ P ++
Sbjct: 228 IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGD--FEDHLVPHKLE 285
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL + QIS G H+ A DG LY WGWN GQVGV D H +F
Sbjct: 286 ALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNED------HCSPVQVNFP 339
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ KVV VACG RHTLAL + +++ G QL G
Sbjct: 340 NEQ-KVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHG 377
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-------RALSGLGVV 86
I+ G H +AL G+V SWG G GQLG+ DA P A G+ V
Sbjct: 30 ISAGASHSVALLSGGVVCSWGRGEDGQLGH----GDAEDRPVPTVLTAAFDDAPGGVASV 85
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
I +A ++ LY+WGW + G++G D V +P P+ Q +++
Sbjct: 86 VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD--VFNPQPIQ-----ALQGVRITQ 138
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ACG H LA+ + G N+ QL +G
Sbjct: 139 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLG 169
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ + V +ACG+ H LALT+ VFSWG G+ GQLG+ D N+ P+ I A
Sbjct: 333 PVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEI-VDRNI-PKMIDA 390
Query: 80 LSGLG 84
LS G
Sbjct: 391 LSSDG 395
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV ISAG HS A G + +WG GQ+G D P P + FD V
Sbjct: 27 VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDR----PVPTVLTAAFDDAPGGV 82
Query: 145 VDVA-CGSRHTLALCDDN-SLWGCGWNEYNQLSMG 177
V CG+ HT A D+ L+ GW ++ +L G
Sbjct: 83 ASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHG 117
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 93/164 (56%), Gaps = 10/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S VF+ P + + +T IACG HCLA+T G V SWG GQLG + T+ ++
Sbjct: 115 SDVFN-PQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGN--TEDSLL 171
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I+A G+ V I+AG H+AA T+DG LY WGW G +G+ + D ++ P +S
Sbjct: 172 PQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLI--PEKVS- 228
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
K+V VACG RHT+ + S++ GW++Y QL G
Sbjct: 229 ----SVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHG 268
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + +ACG+ H + ++ G ++++G GQLG+ + ++ P ++
Sbjct: 223 IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGD--FEDHLVPHKLE 280
Query: 79 ALSGLGVVQISA---------------GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
AL + Q A GG A DG LY WGWN GQVGV D
Sbjct: 281 ALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNED- 339
Query: 124 VVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
H +F ++ KVV VACG RHTLAL + +++ G QL G
Sbjct: 340 -----HCSPVQVNFPNEQ-KVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHG 387
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 18/154 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-------RALSGL 83
V I+ G H +AL G+V SWG G GQLG+ DA P A G+
Sbjct: 22 VVLISAGASHSVALLSGGVVCSWGRGEDGQLGH----GDAEDRPVPTVLTAAFDDAPGGV 77
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
V I +A ++ LY+WGW + G++G D V +P P+ Q ++
Sbjct: 78 ASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD--VFNPQPIQ-----ALQGVR 130
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +ACG H LA+ + G N+ QL +G
Sbjct: 131 ITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG 164
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ + V +ACG+ H LALT+ VFSWG G+ GQLG+ D N+ P+ I A
Sbjct: 343 PVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEI-VDRNI-PKMIDA 400
Query: 80 LSGLG 84
LS G
Sbjct: 401 LSSDG 405
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ VF P + + + +ACG HCLA+T G V SWG GQLG + T+ ++
Sbjct: 105 TDVF-TPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT--TEDSLL 161
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ I+A G+ V I+AG H+AA T+DG +Y WGW G +G+ + D V P +S
Sbjct: 162 PQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFV--PEKVSS 219
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E K+V VACG RHT+ + SL+ GW++Y QL G
Sbjct: 220 VE-----GDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHG 258
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 89/160 (55%), Gaps = 10/160 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P+ + F +T + CG DH A ++ E V+SWG G G+LG+ +S TD P+ +
Sbjct: 56 VPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNS-TDV-FTPQPV 113
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+AL G+ + Q++ G H A T G + +WG N GQ+G+ D ++ P + + F
Sbjct: 114 KALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL--PQTI---QAF 168
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ ++K+ +A G+ HT A+ +D ++G GW Y L +G
Sbjct: 169 EGISVKM--IAAGAEHTAAVTEDGDIYGWGWGRYGNLGLG 206
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG+ H + ++ G ++++G GQLG+ + ++ P ++ AL QIS G
Sbjct: 228 VACGWRHTITVSSSGSLYTYGWSKYGQLGH--GDFEDHLVPHKVEALKDSSTSQISGGWR 285
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ A T DG LY WGWN GQVG D P +++ E+ KV VACG RH
Sbjct: 286 HTMALTSDGKLYGWGWNKFGQVGAGDNADHC--SPAQVNFPEE-----QKVAQVACGWRH 338
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA + +++ G QL G
Sbjct: 339 TLAFTEKKNVFAWGRGTSGQLGHG 362
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++ G H +AL ++ +WG G GQLG+ + + + P I G+ + G
Sbjct: 19 VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDA--EDRLVPTVISGFDAPGITSVICGAD 76
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A ++D +Y+WGW + G++G D V P P+ Q IK+ +ACG
Sbjct: 77 HTTAYSEDEHQVYSWGWGDFGRLGHGNSTD--VFTPQPVK-----ALQGIKIKQLACGDS 129
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGC 178
H LA+ + G N+ QL +G
Sbjct: 130 HCLAVTMAGEVLSWGRNQNGQLGLGT 155
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREI 77
+P +++ D + I+ G+ H +ALT +G ++ WG GQ+G +G +A+ P ++
Sbjct: 265 VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVG---AGDNADHCSPAQV 321
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
V Q++ G H+ A T+ ++AWG GQ+G
Sbjct: 322 NFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLG 360
Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
P++++ + V +ACG+ H LA T++ VF+WG G+ GQLG+
Sbjct: 318 PAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGH 361
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV +SAG HS A L WG GQ+G D +V P +S FD+ I
Sbjct: 16 VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV--PTVIS---GFDAPGI-- 68
Query: 145 VDVACGSRHTLALC-DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
V CG+ HT A D++ ++ GW ++ +L G T + P+ VK +K+
Sbjct: 69 TSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGN-------STDVFTPQPVKALQGIKI 121
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S VF P + L + IACG HCLA+T G V SWG GQLG + T+ ++
Sbjct: 104 SDVF-TPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGT--TEDSLL 160
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I+A + V I+AG H+AA T+DG LY WGW G +G+ + D ++ P +S
Sbjct: 161 PQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL--PEKVSS 218
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E K+V VACG RHT+ + D +L+ GW++Y QL G
Sbjct: 219 VE-----GEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHG 257
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 90/160 (56%), Gaps = 10/160 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P+ + F +T + CG DH A +++ + V+SWG G G+LG+ +S +D P+ +
Sbjct: 55 VPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNS-SDV-FTPQPV 112
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+AL GL + QI+ G H A T G + +WG N GQ+G+ D ++ P + + F
Sbjct: 113 KALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKI---QAF 167
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+S +K+ +A G+ HT A+ +D L+G GW Y L +G
Sbjct: 168 ESVCVKM--IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 205
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 9/159 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + +ACG+ H + ++ G ++++G GQLG+ + ++ P ++
Sbjct: 212 LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGD--FEDHLVPHKVE 269
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL + QIS G H+ A T +G LY WGWN GQVGV D P +S+ ED
Sbjct: 270 ALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDH--SSPGQVSFPED-- 325
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
K+ VACG RHTLAL + +++ G QL G
Sbjct: 326 ---QKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNG 361
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV +SAG HS A L +WG GQ+G D +V P +S FD+ I
Sbjct: 15 VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLS---GFDAPAI-- 67
Query: 145 VDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMG 177
V CG+ HT A +D ++ GW ++ +L G
Sbjct: 68 TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHG 101
>gi|115767093|ref|XP_787316.2| PREDICTED: RCC1 domain-containing protein 1-like
[Strongylocentrotus purpuratus]
Length = 371
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 13/158 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +IACG +H L LT +G+V+S+G GSRGQLG+ G + P+ + A++ + +V ISA
Sbjct: 172 VQEIACGKEHALLLTAQGLVYSYGMGSRGQLGHGDIGKED--VPKLLDAIACVPMVTISA 229
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP---HPMSWSEDFD--------S 139
GGWHSA + G +Y WGWN GQ+G+ L+ + H M+ F
Sbjct: 230 GGWHSACISAIGDMYIWGWNESGQLGLPPDLESSRTEEGSSHVMADRISFQMVPAVLDLP 289
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V V+CGSRHT A+ D L+ GW +Y QL G
Sbjct: 290 GGVNVSKVSCGSRHTAAVSYDKRLYTWGWGKYGQLGHG 327
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ VF P + + + +ACG HCLA+T G V SWG GQLG + T+ ++
Sbjct: 105 TDVF-TPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT--TEDSLL 161
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ I+A G+ V I+AG H+AA T+DG +Y WGW G +G+ + D V P +S
Sbjct: 162 PQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFV--PEKVSS 219
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E K+V VACG RHT+ + SL+ GW++Y QL G
Sbjct: 220 VE-----GDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHG 258
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 89/160 (55%), Gaps = 10/160 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P+ + F +T + CG DH A ++ E V+SWG G G+LG+ +S TD P+ +
Sbjct: 56 VPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNS-TDV-FTPQPV 113
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+AL G+ + Q++ G H A T G + +WG N GQ+G+ D ++ P + + F
Sbjct: 114 KALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL--PQTI---QAF 168
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ ++K+ +A G+ HT A+ +D ++G GW Y L +G
Sbjct: 169 EGISVKM--IAAGAEHTAAVTEDGDIYGWGWGRYGNLGLG 206
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG+ H + ++ G ++++G GQLG+ + ++ P ++ AL QIS G
Sbjct: 228 VACGWRHTITVSSSGSLYTYGWSKYGQLGHGD--FEDHLVPHKVEALKDSSTSQISGGWR 285
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ A T DG LY WGWN GQVG D P +++ E+ KV VACG RH
Sbjct: 286 HTMALTSDGKLYGWGWNKFGQVGAGDNADHC--SPAQVNFPEE-----QKVAQVACGWRH 338
Query: 154 TLAL 157
TLA
Sbjct: 339 TLAF 342
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V ++ G H +AL ++ +WG G GQLG+ + + + P I G+ +
Sbjct: 15 AVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDA--EDRLVPTVISGFDAPGITSVI 72
Query: 90 AGGWHSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++D +Y+WGW + G++G D V P P+ Q IK+ +A
Sbjct: 73 CGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTD--VFTPQPVK-----ALQGIKIKQLA 125
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG H LA+ + G N+ QL G G ++ S++ + + ++ AEH
Sbjct: 126 CGDSHCLAVTMAGEVLSWGRNQNGQL--GLGTTEDSLLPQTIQAFEGISVKMIAAGAEH 182
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S VF P + + + IACG HCLA+T G V SWG GQLG + T+ ++
Sbjct: 115 SDVF-TPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGT--TEDSLL 171
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I++ G+ V I+AG H+AA T+DG LY WGW G +G+ + D +V P +S
Sbjct: 172 PQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV--PEKVSS 229
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E K+V +ACG RHT+ + SL+ GW++Y QL G
Sbjct: 230 VE-----GEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHG 268
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + IACG+ H + ++ G ++++G GQLG+ + ++ P ++
Sbjct: 223 VPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGH--GDFEDHLVPHKLE 280
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL + QIS G H+ A T DG LY WGWN GQVGV D P + + ED
Sbjct: 281 ALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCF--PVQVKFPED-- 336
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
KV VACG RHTLA + +++ G QL G
Sbjct: 337 ---QKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHG 372
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 82/201 (40%), Gaps = 60/201 (29%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--------PS--SGTDAN-------- 71
V ++ G H +AL ++ SWG G GQLG+ P+ SG DA
Sbjct: 23 AVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVI 82
Query: 72 -----------------------------------MEPREIRALSGLGVVQISAGGWHSA 96
P+ ++AL G+ + QI+ G H
Sbjct: 83 CGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCL 142
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
A T G + +WG N GQ+G+ D ++ P + + F+ +K+ +A G+ HT A
Sbjct: 143 AVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKI---QSFEGVCVKM--IAAGAEHTAA 195
Query: 157 LCDDNSLWGCGWNEYNQLSMG 177
+ +D L+G GW Y L +G
Sbjct: 196 VTEDGDLYGWGWGRYGNLGLG 216
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S VF P + L + IACG HCLA+T G V SWG GQLG + T+ ++
Sbjct: 104 SDVF-TPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGT--TEDSLL 160
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I+A + V I+AG H+AA T+DG LY WGW G +G+ + D ++ P +S
Sbjct: 161 PQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL--PEKVSS 218
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E K+V VACG RHT+ + D +L+ GW++Y QL G
Sbjct: 219 VE-----GEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHG 257
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 90/160 (56%), Gaps = 10/160 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P+ + F +T + CG DH A +++ + V+SWG G G+LG+ +S +D P+ +
Sbjct: 55 VPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNS-SDV-FTPQPV 112
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+AL GL + QI+ G H A T G + +WG N GQ+G+ D ++ P + + F
Sbjct: 113 KALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKI---QAF 167
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+S +K+ +A G+ HT A+ +D L+G GW Y L +G
Sbjct: 168 ESVCVKM--IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 205
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + +ACG+ H + ++ G ++++G GQLG+ + ++ P ++
Sbjct: 212 LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGD--FEDHLVPHKVE 269
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
AL + QIS G H+ A T +G LY WGWN GQVGV
Sbjct: 270 ALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV 308
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV +SAG HS A L +WG GQ+G D +V P +S FD+ I
Sbjct: 15 VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLS---GFDAPAI-- 67
Query: 145 VDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMG 177
V CG+ HT A +D ++ GW ++ +L G
Sbjct: 68 TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHG 101
>gi|195113523|ref|XP_002001317.1| GI10720 [Drosophila mojavensis]
gi|193917911|gb|EDW16778.1| GI10720 [Drosophila mojavensis]
Length = 368
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 16 VFHMPSRMDHFLD--LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
V+ +PS + F V + CG +H L L G V+SWGNG RGQLG+ S G +
Sbjct: 158 VYSIPSCLHRFPQGSWRVRQLECGHEHALLLNGNGDVYSWGNGLRGQLGHESLGVEE--R 215
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLVVHDP--HP 130
P + L+G+ + I+AGGWHSAA + G LY WGWN GQ+G+ K D ++ +P +P
Sbjct: 216 PLLLEPLAGIKITHIAAGGWHSAAISAFGDLYVWGWNCNGQLGMRVMKPDGLLKEPTVYP 275
Query: 131 MSWSEDFDSQNIKV---------VDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +D + V + GSRHTL LW CGW + QL
Sbjct: 276 LPQLQDLPACCAAVEAETDVCTPIKAYAGSRHTLIQRSCGRLWACGWCAHGQL 328
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S P + L + IACG HCLA+T +G V SWG GQLG + T+ ++
Sbjct: 108 SSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT--TEDSLV 165
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I+A G+ + ++AG H+AA T+DG LY WGW G +G+ + D +V P +S
Sbjct: 166 PQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV--PEKVSL 223
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
K++ VACG RHT+++ L+ GW++Y QL G
Sbjct: 224 -----VNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHG 262
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 87/159 (54%), Gaps = 10/159 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+++ L + I CG DH + ++ + V+SWG G G+LG+ +S +D P+ I+
Sbjct: 61 PTQLSTLDGLDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNS-SDL-FTPQPIK 118
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL L + QI+ G H A T DG + +WG N GQ+G+ D +V P + + F
Sbjct: 119 ALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV--PQKI---QAFQ 173
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+IK+ VA G+ HT A+ +D L+G GW Y L +G
Sbjct: 174 GVSIKM--VAAGAEHTAAVTEDGELYGWGWGRYGNLGLG 210
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG+ H ++++ G ++++G GQLG+ + ++ P ++ AL + IS G
Sbjct: 232 VACGWRHTISVSSSGGLYTYGWSKYGQLGHGD--FEDHLTPHKVEALRDSYISMISGGWR 289
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLD----LVVHDPHPMSWSEDFDSQNIKVVDVAC 149
H+ A T DG LY WGWN GQVGV +D + V PH + S +V ++C
Sbjct: 290 HTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHS---------LVQISC 340
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G RHTLA+ + +++ G QL G
Sbjct: 341 GWRHTLAITERQNVFSWGRGTNGQLGHG 368
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL IV SWG G GQLG+ + + P ++ L GL ++ I+ G
Sbjct: 23 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDA--EDRPTPTQLSTLDGLDIISITCGAD 80
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ + ++ +Y+WGW + G++G DL P P+ ++K+ +ACG
Sbjct: 81 HTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFT--PQPIK-----ALHSLKIRQIACGDS 133
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGC 178
H LA+ D + G N+ QL +G
Sbjct: 134 HCLAVTMDGEVQSWGRNQNGQLGLGT 159
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS--GLGVVQI 88
+ I+CG+ H LA+T+ VFSWG G+ GQLG+ S D N+ P+ I LS G G QI
Sbjct: 335 LVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGES-MDRNL-PKIIEVLSADGSGGHQI 392
Query: 89 SA 90
A
Sbjct: 393 EA 394
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ D ++ I+ G+ H +ALT +G ++ WG GQ+G + + +
Sbjct: 270 PHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPH 329
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+VQIS G H+ A T+ +++WG GQ+G
Sbjct: 330 EQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLG 366
>gi|157106555|ref|XP_001649375.1| hypothetical protein AaeL_AAEL004561 [Aedes aegypti]
gi|108879794|gb|EAT44019.1| AAEL004561-PA [Aedes aegypti]
Length = 354
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 91/158 (57%), Gaps = 7/158 (4%)
Query: 16 VFHMPSRMDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
VF++P++ F V + + G +HCL LT G V+SWG G RGQLG + T +P
Sbjct: 142 VFNIPNKTFTFPKHVRIRKVVVGLEHCLLLTGNGDVYSWGCGLRGQLG-NGAITPHKEQP 200
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL---VVHDPHPM 131
+ + AL+G+ +V I+AGGWHSAA + G LY WGWN+ GQ+G+ + + V P +
Sbjct: 201 QLVEALAGVKIVDIAAGGWHSAAVSSFGDLYCWGWNSKGQLGLMDEKQVRGTVFALPQVI 260
Query: 132 SWSEDFD--SQNIKVVDVACGSRHTLALCDDNSLWGCG 167
SE D SQ I + +V CG+ HT+ + L+ G
Sbjct: 261 EVSEQEDDQSQEISIENVHCGNCHTVVISSKGELYFAG 298
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
++ IACG +A+T G VF+ N + P+ +R + ++
Sbjct: 122 ISHIACGDKVSIAVTSPGKYVFNIPNKTF-------------TFPKHVR------IRKVV 162
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H T +G +Y+WG G+ G+L PH +K+VD+A
Sbjct: 163 VGLEHCLLLTGNGDVYSWG------CGLRGQLGNGAITPHKEQPQLVEALAGVKIVDIAA 216
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSM 176
G H+ A+ L+ GWN QL +
Sbjct: 217 GGWHSAAVSSFGDLYCWGWNSKGQLGL 243
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 88/161 (54%), Gaps = 10/161 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P + L + IACG HCLA+T EG V SWG GQLG + T+ ++ P++
Sbjct: 108 LFIPQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT--TEDSLVPQK 165
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I+ G+ + ++AG HS A T++G LY WGW G +G+ + D + P S D
Sbjct: 166 IQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCI----PEKVSVD 221
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D K+V VACG RHT+++ L+ GW++Y QL G
Sbjct: 222 CD----KMVLVACGWRHTISVSSSGELYTYGWSKYGQLGHG 258
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 90/160 (56%), Gaps = 10/160 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P+++ + + CG DH LA ++ + V+SWG G G+LG+ +S +D + P+ I
Sbjct: 57 LPTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNS-SDLFI-PQPI 114
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
RAL GL + QI+ G H A T +G + +WG N GQ+G+ D +V P + + F
Sbjct: 115 RALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV--PQKI---QTF 169
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
IK+ VA G+ H++A+ ++ L+G GW Y L +G
Sbjct: 170 QGVPIKM--VAAGAEHSVAITENGELYGWGWGRYGNLGLG 207
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 18/163 (11%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ D +V +ACG+ H ++++ G ++++G GQLG+ ++ P +++
Sbjct: 214 IPEKVSVDCDKMVL-VACGWRHTISVSSSGELYTYGWSKYGQLGH--GDCKDHLVPHKLQ 270
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD----LVVHDPHPMSWS 134
A S + Q+S G H+ A T G LY WGWN GQVGV +D + V PH
Sbjct: 271 AFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPH----- 325
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ KV ++CG RHT+A+ + ++++ G QL +G
Sbjct: 326 ------DQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIG 362
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL +V SWG G GQLG+ TD + P ++ AL +V + G
Sbjct: 20 ISAGGSHSVALISGNVVCSWGRGEDGQLGH--GDTDDRLLPTQLSALDAQQIVSVVCGAD 77
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A ++ +Y+WGW + G++G DL + P P+ Q +++ +ACG
Sbjct: 78 HTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFI--PQPIR-----ALQGLRIKQIACGDS 130
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LA+ + + G N+ QL +G
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGLG 155
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P ++ F D ++ ++ G+ H +ALT G ++ WG GQ+G G + + P ++
Sbjct: 265 VPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGV---GDNVDRCSPVQV 321
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD 122
+ V QIS G H+ A T+ +Y+WG GQ+G+ +D
Sbjct: 322 KFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTID 366
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D V I+CG+ H +A+T++ V+SWG G+ GQLG + D N P+ I A
Sbjct: 318 PVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDT-IDWNY-PKIIEA 375
Query: 80 LS 81
LS
Sbjct: 376 LS 377
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+ ISAGG HS A + +WG GQ+G D ++ P +S D+Q I
Sbjct: 17 VLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLL--PTQLS---ALDAQQI-- 69
Query: 145 VDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMG 177
V V CG+ HTLA + ++ GW ++ +L G
Sbjct: 70 VSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHG 103
>gi|91090330|ref|XP_966667.1| PREDICTED: similar to CG6678 CG6678-PA [Tribolium castaneum]
Length = 285
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 92/160 (57%), Gaps = 17/160 (10%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
++++P++++ F+ + ++ G +HCL L + G VFS+G GSRGQLG+ D EP+
Sbjct: 126 LYNVPNKLE-FVSGDIIEVKTGREHCLLLDKSGNVFSFGRGSRGQLGHGC--LDDESEPK 182
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I AL G+ + I AGGWHS A +++G LY WGWN GQ+G+ G D V P
Sbjct: 183 FIEALGGVKIEAIEAGGWHSCALSKEGDLYVWGWNGSGQLGLGGSDDGVSIMATPQVLDF 242
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
DF NIK V CD+ L+GCGWN+Y QL
Sbjct: 243 DF---NIKKVG-----------CDEGKLFGCGWNKYKQLK 268
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 33/208 (15%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
LK+ V +P M D V I+ G C+ALT++G++++
Sbjct: 86 LKITESVIKVPKLMGLDDDDTVVQISTGSKLCVALTKKGLLYNV---------------- 129
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
P ++ +SG ++++ G H + G ++++G + GQ+G G LD D
Sbjct: 130 ----PNKLEFVSG-DIIEVKTGREHCLLLDKSGNVFSFGRGSRGQLG-HGCLD----DES 179
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ E +K+ + G H+ AL + L+ GWN QL +G VS+M
Sbjct: 180 EPKFIEALGG--VKIEAIEAGGWHSCALSKEGDLYVWGWNGSGQLGLGGSDDGVSIMATP 237
Query: 190 SVPEHVKN-----CPIVKLFAEHWNSAR 212
V + N C KLF WN +
Sbjct: 238 QVLDFDFNIKKVGCDEGKLFGCGWNKYK 265
>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
Length = 892
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 93/163 (57%), Gaps = 10/163 (6%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
++Q ++P ++ F + V+ +ACG H +ALT+EG V++WG SRGQLG G +
Sbjct: 101 VTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSIS- 159
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P+ +R+LSG+ +VQ+SAGG HS A + G ++ WG N+ GQ+G+ D P S
Sbjct: 160 SPQCVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCT----PTS 215
Query: 133 WSEDFDSQNI-KVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
DS N+ K ++CG HT L +++ G ++ QL
Sbjct: 216 ----VDSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQL 254
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ +D T I+CG DH LT+ G VF++G+G GQLG+ SS + + PR +
Sbjct: 213 PTSVDSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNE--LRPRLVAE 270
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
L G V +I+ G +H+ ++ +Y++G N+ Q+G +D HP
Sbjct: 271 LWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQNQLGRS-------NDSHP 314
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM---GCGVSQVSVMTRLS 190
I V VACGSRHT+AL + ++ G N QL + GC +S + LS
Sbjct: 116 RIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLS 168
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 8/171 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S++ H+P+ LV+T ++CG DH LA+T G V WG RGQ G + ++ +
Sbjct: 77 SELAHVPATET----LVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRK 132
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR +++LS V Q++ G HS A T+DG ++AWG N+ GQ+G+ G ++ HP
Sbjct: 133 PRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGI-GAPGRTLYRDHPQQL 191
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S + + +ACG H+ AL +++G G N QL +G +VS
Sbjct: 192 S---SLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVS 239
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 8/155 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG-TDANMEPREIRALSGLGVVQIS 89
V +ACG H +ALT++G +F+WG+ S GQLG + G T P+++ +L G+ + +++
Sbjct: 144 VAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLA 203
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GGWHS A + G ++ WG NN GQ+G+ D V P P+ ++ ++ +K +AC
Sbjct: 204 CGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRV--SPTPL---KNLKTKQVKY--IAC 256
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G +T L L+ G QL G ++V+
Sbjct: 257 GQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVN 291
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANM--EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
VFSWG GQLG G D PRE+ AL+G + +IS G H+ +DG +
Sbjct: 3 VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G N+ GQ+G + + H P ++ + + V+CG+ HTLA+ D + G G
Sbjct: 63 GANDRGQLGQDRPGSELAHVPA---------TETLVITQVSCGNDHTLAVTDRGQVLGWG 113
Query: 168 WNEYNQLSMGCGVSQVSVMTRL 189
N+ Q + G S+ R
Sbjct: 114 RNDRGQCGLSTGDSEDKRKPRF 135
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + + V IACG ++ LT G +F +G GS GQLG+ S + N PR ++
Sbjct: 240 PTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVN--PRSVQG 297
Query: 80 LSGLGVVQISAGGWHS-AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
G + Q++ G H+ + G ++ G + GQ+G++ P P W
Sbjct: 298 FLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVPGPW 352
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS+ L++ ++ AC L G +F +G GS GQLG+ S + N PR ++
Sbjct: 426 PSKAVQTLEMALSSPACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVN--PRSVKD 483
Query: 80 LSGLGVVQISAGGWHS-AARTQDGFLYAWGWNNGGQVGVE 118
G + Q++ G H+ + G Y+ G + GQ+G++
Sbjct: 484 FLGNEITQVACGRQHTLVLEGRTGGFYSLGQGSKGQLGLD 523
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
L + +P ++ D+ + +ACG H LAL+++G VFSWG S GQLG +PS +
Sbjct: 84 LKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQAS 143
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG NN GQ+ + G + V
Sbjct: 144 -----PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGN-NAPVQRY 197
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+ + + VV ++CG HT L D ++ G N Y QL
Sbjct: 198 KPVLVGA---LKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQL 240
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L V ++CG +H LA+ +G VF+WG S GQLG + P++I+
Sbjct: 38 PERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGI-GELKETTFIPKKIKT 96
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ + ++Q++ G +HS A ++DG +++WG N+ GQ+G+ + P S
Sbjct: 97 LADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEF------PSQASPQRVRSL 150
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 151 EGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAL 187
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G H L L +G V S G+ SRGQLG GT +P I AL L V +S G HS
Sbjct: 3 GEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLHVALVSCGKEHSL 60
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
A G ++AWG + GQ+G+ G+L P + D IK++ VACG H+LA
Sbjct: 61 AVCHKGRVFAWGAASEGQLGI-GELKETTFIPKKIKTLAD-----IKIIQVACGHYHSLA 114
Query: 157 LCDDNSLWGCGWNEYNQLSMG 177
L +D ++ G N + QL +G
Sbjct: 115 LSEDGQVFSWGKNSHGQLGLG 135
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L V I+CG++H LTQ+G VF++G+ S GQLG+ S+ P+ + + GL V QI
Sbjct: 208 LSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRG--PQLVERIEGL-VSQI 264
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
G +H+ A+ + G V PHP + +E D
Sbjct: 265 DCGSYHT---------LAYVYTTGQVVSFGRGPGCTRSSPHPEALAESSD 305
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 14/176 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
++ +P ++ + + I+CG+ H LAL+++G VFSWG S GQLG +PS +
Sbjct: 118 FEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQAS 177
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ G +++V
Sbjct: 178 -----PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGN-NVLVQSY 231
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
P S +N+ VV ++CG HT L ++ ++ G N + QL GVSQ +
Sbjct: 232 KPRSVGA---LKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGHN-GVSQTT 283
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + ++L V ++CG +H LA+ +G VF+WG GS GQLG + P++I+A
Sbjct: 72 PEPIQALVNLPVDLVSCGKEHSLAVCHKGKVFAWGVGSDGQLG-TGKFEEICFIPQKIKA 130
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G+ ++QIS G +HS A ++DG +++WG N+ GQ+G+ + P S
Sbjct: 131 LTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHGQLGLGQEF------PSQASPQRVRSL 184
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL+
Sbjct: 185 EGIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAF 221
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L +V + G+ S GQLG G + +P I+AL L V +S G H
Sbjct: 35 ASGERHALLLLTNQVVHACGDNSGGQLG--RRGAPSGKQPEPIQALVNLPVDLVSCGKEH 92
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G GK + + P + IK++ ++CG H+
Sbjct: 93 SLAVCHKGKVFAWGVGSDGQLGT-GKFEEICFIPQKIK-----ALTGIKIIQISCGYYHS 146
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D ++ G N + QL +G
Sbjct: 147 LALSKDGQVFSWGKNSHGQLGLG 169
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA---NMEPRE 76
P R+ + + +A G H AL+ G F WGN S GQL + SG + + +PR
Sbjct: 178 PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAF--SGNNVLVQSYKPRS 235
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL LGVV IS G H+A TQ+ ++ +G N+ GQ+G G V P +
Sbjct: 236 VGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGHNG----VSQTTGP----QL 287
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ V + CGS HTLA
Sbjct: 288 VEGIGGPVSQIDCGSYHTLA 307
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
G++Q ++G H+ + ++A G N+GGQ+G G P P+ N+
Sbjct: 30 GLLQAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPS--GKQPEPIQ-----ALVNLP 82
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V V+CG H+LA+C ++ G QL G
Sbjct: 83 VDLVSCGKEHSLAVCHKGKVFAWGVGSDGQLGTG 116
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+ + IACG HCLA+T EG V SWG GQLG T+ ++ P++I+A G+ + +
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGD--TEDSLVPQKIQAFEGIRIKMV 177
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+AG H+AA T+DG LY WGW G +G+ + D +V + + E K+ VA
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE-------KMSMVA 230
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG RHT+++ +L+ GW++Y QL G
Sbjct: 231 CGWRHTISVSYSGALYTYGWSKYGQLGHG 259
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P R+ ++ +ACG+ H ++++ G ++++G GQLG+ + ++ P ++
Sbjct: 214 VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD--LEDHLIPHKLE 271
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
ALS + QIS G H+ A T DG LY WGWN GQVGV LD P + + +D
Sbjct: 272 ALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQC--SPVQVRFPDDQ- 328
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ--VSVMTRLSVP---- 192
KVV V+CG RHTLA+ + N+++ G QL +G V + ++ LSV
Sbjct: 329 ----KVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASG 384
Query: 193 EHVKNCPIVKLFAEHWNS 210
+H+++ I + W S
Sbjct: 385 QHIESSNIDPSSGKSWVS 402
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 17/185 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+++ + + CG DH +A +Q G+ V+SWG G G+LG+ +S +D P I+
Sbjct: 58 PTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS-SDL-FTPLPIK 115
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ + QI+ G H A T +G + +WG N GQ+G+ D +V P + + F+
Sbjct: 116 ALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKI---QAFE 170
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
IK+ VA G+ HT A+ +D L+G GW Y L +G ++ VPE V +
Sbjct: 171 GIRIKM--VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL-------VPERVTST 221
Query: 199 PIVKL 203
K+
Sbjct: 222 GGEKM 226
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL IV SWG G GQLG+ + + P ++ AL G +V ++ G
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDA--EDRPSPTQLSALDGHQIVSVTCGAD 77
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A +Q G +Y+WGW + G++G DL P P+ I++ +ACG
Sbjct: 78 HTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFT--PLPIK-----ALHGIRIKQIACGDS 130
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LA+ + + G N+ QL +G
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGLG 155
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S P + + + IACG HCLA+T EG V SWG GQLG T+ ++
Sbjct: 106 SSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGD--TEDSLV 163
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I+A G+ + ++AG H+AA T+DG LY WGW G +G+ + D +V + +
Sbjct: 164 PQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTG 223
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E K+ VACG RHT+++ +L+ GW++Y QL G
Sbjct: 224 GE-------KMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG 260
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P R+ ++ +ACG+ H ++++ G ++++G GQLG+ + ++ P ++
Sbjct: 215 VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD--LEDHLIPHKLE 272
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
ALS + QIS G H+ A T DG LY WGWN GQVGV LD P + + +D
Sbjct: 273 ALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQC--SPVQVRFPDD-- 328
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ--VSVMTRLSVP---- 192
KVV V+CG RHTLA+ + N+++ G QL +G V + ++ LSV
Sbjct: 329 ---QKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASG 385
Query: 193 EHVKNCPIVKLFAEHWNS 210
+H+++ I + W S
Sbjct: 386 QHIESSNIDPSSGKSWVS 403
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 17/185 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+++ + + CG DH +A +Q G+ V+SWG G G+LG+ +S +D P I+
Sbjct: 59 PTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS-SDL-FTPLPIK 116
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ + QI+ G H A T +G + +WG N GQ+G+ D +V P + + F+
Sbjct: 117 ALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKI---QAFE 171
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
IK+ VA G+ HT A+ +D L+G GW Y L +G ++ VPE V +
Sbjct: 172 GIRIKM--VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL-------VPERVTST 222
Query: 199 PIVKL 203
K+
Sbjct: 223 GGEKM 227
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL IV SWG G GQLG+ + + P ++ AL G +V ++ G
Sbjct: 21 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDA--EDRPSPTQLSALDGHQIVSVTCGAD 78
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A +Q G +Y+WGW + G++G DL P P+ I++ +ACG
Sbjct: 79 HTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFT--PLPIK-----ALHGIRIKQIACGDS 131
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LA+ + + G N+ QL +G
Sbjct: 132 HCLAVTMEGEVQSWGRNQNGQLGLG 156
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+ + IACG HCLA+T EG V SWG GQLG T+ ++ P++I+A G+ + +
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGD--TEDSLVPQKIQAFEGIPIKMV 177
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+AG H+AA T+DG LY WGW G +G+ + D +V + + E K+ VA
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE-------KMSMVA 230
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG RHT+++ +L+ GW++Y QL G
Sbjct: 231 CGWRHTISVSYSGALYTYGWSKYGQLGHG 259
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P R+ ++ +ACG+ H ++++ G ++++G GQLG+ + ++ P ++
Sbjct: 214 VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD--LEDHLIPHKLE 271
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
ALS + QIS G H+ A T DG LY WGWN GQVGV LD P + + +D
Sbjct: 272 ALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQC--SPVQVRFPDDQ- 328
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ--VSVMTRLSVP---- 192
KVV V+CG RHTLA+ + N+++ G QL +G V + ++ LSV
Sbjct: 329 ----KVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASG 384
Query: 193 EHVKNCPIVKLFAEHWNS 210
+H+++ I + W S
Sbjct: 385 QHIESSNIDPSSGKSWVS 402
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 17/185 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+++ + + CG DH +A +Q G+ V+SWG G G+LG+ +S +D P I+
Sbjct: 58 PTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS-SDL-FTPLPIK 115
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ + QI+ G H A T +G + +WG N GQ+G+ D +V P + + F+
Sbjct: 116 ALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKI---QAFE 170
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
IK+ VA G+ HT A+ +D L+G GW Y L +G ++ VPE V +
Sbjct: 171 GIPIKM--VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL-------VPERVTST 221
Query: 199 PIVKL 203
K+
Sbjct: 222 GGEKM 226
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL IV SWG G GQLG+ + + P ++ AL G +V ++ G
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDA--EDRPSPTQLSALDGHQIVSVTCGAD 77
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A +Q G +Y+WGW + G++G DL P P+ I++ +ACG
Sbjct: 78 HTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFT--PLPIK-----ALHGIRIKQIACGDS 130
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LA+ + + G N+ QL +G
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGLG 155
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+ + IACG HCLA+T EG V SWG GQLG T+ ++ P++I+A G+ + +
Sbjct: 109 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGD--TEDSLVPQKIQAFEGIRIKMV 166
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+AG H+AA T+DG LY WGW G +G+ + D +V + + E K+ VA
Sbjct: 167 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE-------KMSMVA 219
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG RHT+++ +L+ GW++Y QL G
Sbjct: 220 CGWRHTISVSYSGALYTYGWSKYGQLGHG 248
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P R+ ++ +ACG+ H ++++ G ++++G GQLG+ + ++ P ++
Sbjct: 203 VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD--LEDHLIPHKLE 260
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
ALS + QIS G H+ A T DG LY WGWN GQVGV LD P + + +D
Sbjct: 261 ALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQC--SPVQVRFPDD-- 316
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
KVV V+CG RHTLA+ + N+++ G QL +G V +
Sbjct: 317 ---QKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR 357
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 17/185 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+++ + + CG DH +A +Q G+ V+SWG G G+LG+ +S +D P I+
Sbjct: 47 PTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS-SDL-FTPLPIK 104
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ + QI+ G H A T +G + +WG N GQ+G+ D +V P + + F+
Sbjct: 105 ALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKI---QAFE 159
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
IK+ VA G+ HT A+ +D L+G GW Y L +G ++ VPE V +
Sbjct: 160 GIRIKM--VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL-------VPERVTST 210
Query: 199 PIVKL 203
K+
Sbjct: 211 GGEKM 215
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL IV SWG G GQLG+ + + P ++ AL G +V ++ G
Sbjct: 9 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDA--EDRPSPTQLSALDGHQIVSVTCGAD 66
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A +Q G +Y+WGW + G++G DL P P+ I++ +ACG
Sbjct: 67 HTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFT--PLPIK-----ALHGIRIKQIACGDS 119
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LA+ + + G N+ QL +G
Sbjct: 120 HCLAVTMEGEVQSWGRNQNGQLGLG 144
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS 81
D V ++CG+ H LA+T+ VF+WG G+ GQLG S D N P+ I ALS
Sbjct: 316 DQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGES-VDRNF-PKIIEALS 367
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 88/164 (53%), Gaps = 9/164 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S P + + + IACG HCLA+T EG V SWG GQLG T+ ++
Sbjct: 96 SSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGD--TEDSLV 153
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I+A G+ + ++AG H+AA T+DG LY WGW G +G+ + D +V + +
Sbjct: 154 PQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTG 213
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E K VACG RHT+++ +L+ GW++Y QL G
Sbjct: 214 GE-------KXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHG 250
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P R+ + +ACG+ H ++++ G ++++G GQLG+ + ++ P ++
Sbjct: 205 VPERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGD--LEDHLIPHKLE 262
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
ALS + QIS G H+ A T DG LY WGWN GQVGV LD P + + +D
Sbjct: 263 ALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQC--SPVQVRFPDD-- 318
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
KVV V+CG RHTLA+ + N+++ G QL +G V +
Sbjct: 319 ---QKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR 359
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 17/180 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+++ + + CG DH +A +Q G V+SWG G G+LG+ +S +D P I+
Sbjct: 49 PTQLSALDGHQIVSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNS-SDL-FTPLPIK 106
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ + QI+ G H A T +G + +WG N GQ+G+ D +V P + E
Sbjct: 107 ALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFE--- 161
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
I++ VA G+ HT A+ +D L+G GW Y L +G ++ VPE V +
Sbjct: 162 --GIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL-------VPERVTST 212
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL IV SWG G GQLG+ + + P ++ AL G +V ++ G
Sbjct: 11 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDA--EDRPSPTQLSALDGHQIVSVTCGAD 68
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A +Q G +Y+WGW + G++G DL P P+ I++ +ACG
Sbjct: 69 HTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFT--PLPIK-----ALHGIRIKQIACGDS 121
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LA+ + + G N+ QL +G
Sbjct: 122 HCLAVTXEGEVQSWGRNQNGQLGLG 146
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS 81
D V ++CG+ H LA+T+ VF+WG G+ GQLG S D N P+ I ALS
Sbjct: 318 DQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGES-VDRNF-PKIIEALS 369
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S P + + + IACG HCLA+T EG V SWG GQLG T+ ++
Sbjct: 94 SSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGD--TEDSLV 151
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I+A G+ + ++AG H+AA T+DG LY WGW G +G+ + D +V + +
Sbjct: 152 PQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTG 211
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E K+ VACG RHT+++ +L+ GW++Y QL G
Sbjct: 212 GE-------KMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG 248
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P R+ ++ +ACG+ H ++++ G ++++G GQLG+ + ++ P ++
Sbjct: 203 VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD--LEDHLIPHKLE 260
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
ALS + QIS G H+ A T DG LY WGWN GQVGV LD P + + +D
Sbjct: 261 ALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQC--SPVQVRFPDD-- 316
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
KVV V+CG RHTLA+ + N+++ G QL +G V +
Sbjct: 317 ---QKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR 357
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 17/185 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+++ + + CG DH +A +Q G+ V+SWG G G+LG+ +S +D P I+
Sbjct: 47 PTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS-SDL-FTPLPIK 104
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ + QI+ G H A T +G + +WG N GQ+G+ D +V P + + F+
Sbjct: 105 ALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKI---QAFE 159
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
IK+ VA G+ HT A+ +D L+G GW Y L +G ++ VPE V +
Sbjct: 160 GIRIKM--VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL-------VPERVTST 210
Query: 199 PIVKL 203
K+
Sbjct: 211 GGEKM 215
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL IV SWG G GQLG+ + + P ++ AL G +V ++ G
Sbjct: 9 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDA--EDRPSPTQLSALDGHQIVSVTCGAD 66
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A +Q G +Y+WGW + G++G DL P P+ I++ +ACG
Sbjct: 67 HTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFT--PLPIK-----ALHGIRIKQIACGDS 119
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LA+ + + G N+ QL +G
Sbjct: 120 HCLAVTMEGEVQSWGRNQNGQLGLG 144
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS 81
D V ++CG+ H LA+T+ VF+WG G+ GQLG S D N P+ I ALS
Sbjct: 316 DQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGES-VDRNF-PKIIEALS 367
>gi|194743032|ref|XP_001954004.1| GF18053 [Drosophila ananassae]
gi|190627041|gb|EDV42565.1| GF18053 [Drosophila ananassae]
Length = 375
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 18/175 (10%)
Query: 16 VFHMPSRMDHF--LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
V+ +PS + F V + CG +H + L++ G V++WGNG RGQLG T+
Sbjct: 161 VYSIPSCLHQFPGRQFRVKQLECGHEHAVLLSRNGDVYTWGNGLRGQLGQSVLKTEET-- 218
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-----GKLDLVVHDP 128
P + AL+G+ + +I+AGGWHSAA + G LY WG N GQ+G+ G L P
Sbjct: 219 PHLLEALAGIKITRIAAGGWHSAAISAFGDLYTWGLNCSGQLGIRVMKPGGLLKEPTVYP 278
Query: 129 HPM---------SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P S +++ S + + V GSRHTL + LW GW++Y QL
Sbjct: 279 LPQLHDLPECSCSKNQESSSDDCAPLRVFAGSRHTLLIRRCGGLWVSGWSKYGQL 333
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S VF P + + + +ACG HCLA+T G V SWG GQLG + T+ ++
Sbjct: 112 SDVF-TPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGT--TEDSLL 168
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I+A G+ V I+AG H+AA T+DG LY WGW G +G+ + D V P +S
Sbjct: 169 PQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFV--PEKVSL 226
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E K+V +ACG RHT+ + L+ GW++Y QL G
Sbjct: 227 VE-----GEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHG 265
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 10/160 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQE-GIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P+ + F +T + CG DH A ++E V+SWG G G+LG+ +S +D P+ +
Sbjct: 63 VPTVISGFDAPRITSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGNS-SDV-FTPQPV 120
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
RAL G+ + Q++ G H A T G + +WG N GQ+G+ D ++ P + + F
Sbjct: 121 RALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLL--PQKI---QAF 175
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +K+ +A G+ HT A+ +D L+G GW Y L +G
Sbjct: 176 EGICVKM--IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 213
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IACG+ H + ++ GI++++G GQLG+ + ++ P ++ AL QIS G
Sbjct: 235 IACGWRHTITVSSSGILYTYGWSKYGQLGHGD--FEDHLFPHKVEALKDSSTSQISGGWR 292
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ A T DG LY WGWN GQVG +D H F ++ KV VACG RH
Sbjct: 293 HTMALTSDGKLYGWGWNKFGQVGAGDSVD------HCSPVQVMFPAEQ-KVAQVACGWRH 345
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA + +++ G QL G
Sbjct: 346 TLAYTEKKNVFAWGRGTSGQLGHG 369
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
V +ACG+ H LA T++ VF+WG G+ GQLG+
Sbjct: 336 VAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGH 368
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV +SAG HS A + L +WG GQ+G D +V P +S FD+ ++
Sbjct: 23 VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLV--PTVIS---GFDAP--RI 75
Query: 145 VDVACGSRHTLALC-DDNSLWGCGWNEYNQLSMG 177
V CG+ HT A ++ ++ GW ++ +L G
Sbjct: 76 TSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHG 109
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S +P + L + IACG HCLA+T +G V+SWG GQLG TD ++
Sbjct: 95 SSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGD--TDDSLV 152
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++ A G+ V ++AG H+AA T G LY WGW G +G+ + D ++ P
Sbjct: 153 PHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVG 212
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E K+ VACG RHT+A+ L+ GW++Y QL G
Sbjct: 213 DE-------KMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHG 249
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 8/164 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + D + +ACG+ H +A++Q G ++++G GQLG+ ++ P ++
Sbjct: 204 LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYAD--HLLPHQVA 261
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL+ + Q+S G H+ A T+ G LY WGWN GQVG G + D H
Sbjct: 262 ALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVG-SGDV-----DDHTSPQLISIP 315
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
Q+ +VV V+CG RHT+A+ D N+++ G QL G V +
Sbjct: 316 GQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDR 359
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 86/160 (53%), Gaps = 10/160 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + D ++ +ACG DH A + + ++SWG G G+LG+ +S +D + P I
Sbjct: 47 LPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNS-SDLFV-PHPI 104
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+AL GL + QI+ G H A T DG +Y+WG N GQ+G+ D +V PH +
Sbjct: 105 KALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV--PHKL-----L 157
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + V +A G+ HT A+ D L+G GW Y L +G
Sbjct: 158 AFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLG 197
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++ G H +AL +V S+G G GQLG+ + + + PR I AL+ + ++ G
Sbjct: 10 VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDA--EDRLLPRIIGALNDCEISLVACGAD 67
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A + +Y+WGW + G++G DL V PHP+ Q +++ +ACG
Sbjct: 68 HTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFV--PHPIK-----ALQGLEIRQIACGDS 120
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LA+ D ++ G N+ QL +G
Sbjct: 121 HCLAVTADGEVYSWGRNQNGQLGLG 145
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 4/165 (2%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
++ ++ +P ++D + ++CG H +AL Q+G VFSWG + GQLG
Sbjct: 123 IREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGL-GENVP 181
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ P+ +++L G+ + Q++AGG HS A + G Y WG NN GQ+ + GK +
Sbjct: 182 SQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKESAEQISK 241
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P S E + ++V ++CG HT L D ++ G N+ QL
Sbjct: 242 PFSIGE---LKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQL 283
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 87/157 (55%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ + ++CG +H LA+ +EG VFSWG+GS GQLG +++ P++I
Sbjct: 80 PAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSI-PKKIDE 138
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LS ++Q+S G +HS A QDG +++WG NN GQ+G+ + V P W + D
Sbjct: 139 LSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLG---ENVPSQASP-QWVKSLDG 194
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + VA G H+ AL + +G G N QL++
Sbjct: 195 --IPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLAL 229
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 13/153 (8%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
ACG H L L +G V+S GN S GQLG + P +I+AL +V +S G H
Sbjct: 43 ACGERHSLLLLSDGTVWSCGNNSCGQLG--RKRCQKHGRPAQIQALETQDIVSVSCGKEH 100
Query: 95 SAARTQDGFLYAWGWNNGGQVGVE--GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
S A ++G +++WG + GQ+G+ KL + +S + K++ V+CG
Sbjct: 101 SLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDELS--------SFKIIQVSCGHY 152
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGV-SQVS 184
H++AL D ++ G N + QL +G V SQ S
Sbjct: 153 HSIALAQDGRVFSWGKNNHGQLGLGENVPSQAS 185
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM--EPREIRALSGLGVVQI 88
+ +A G H AL+ G + WG + GQL A +P I L L V I
Sbjct: 197 LAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYI 256
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
S G H+A TQDG ++ +G N+ GQ+G + L + P + + F +A
Sbjct: 257 SCGDEHTAVLTQDGKVFTFGSNDSGQLGRQ--LISGMKGPQVVDSAVSFS-------QIA 307
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CGS HTLA + C + +S GCG SQ + L + V+N I L + +
Sbjct: 308 CGSYHTLA-------YSCTTGQV--ISFGCG-SQRDPIGPLQPGDAVQNFNISNLISSN 356
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG--LG---VVQISAGGWHSAARTQDGF 103
+ + WG+ S GQLG P+ + R +R G LG ++Q + G HS DG
Sbjct: 1 MYYCWGDNSSGQLGIPAV---PRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGT 57
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+++ G N+ GQ+G + + + ++Q+I V V+CG H+LA+C + +
Sbjct: 58 VWSCGNNSCGQLGRKR-----CQKHGRPAQIQALETQDI--VSVSCGKEHSLAICKEGRV 110
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV---KNCPIVKLFAEHWNSARLS 214
+ G QL G+ + ++ S+P+ + + I+++ H++S L+
Sbjct: 111 FSWGSGSDGQL----GIREFKKLS--SIPKKIDELSSFKIIQVSCGHYHSIALA 158
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
LA K ++ P + L VT I+CG +H LTQ+G VF++G+ GQLG
Sbjct: 226 QLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGR 285
Query: 64 P-SSGTDANMEPREIRALSGLGVVQISAGGWHSAA 97
SG P+ + S + QI+ G +H+ A
Sbjct: 286 QLISGMKG---PQVVD--SAVSFSQIACGSYHTLA 315
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S +P + L + IACG HCLA+T +G V+SWG GQLG TD ++
Sbjct: 95 SSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGD--TDDSLV 152
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++ A G+ V ++AG H+AA T G LY WGW G +G+ + D ++ P
Sbjct: 153 PHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVG 212
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E K+ VACG RHT+A+ L+ GW++Y QL G
Sbjct: 213 DE-------KMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHG 249
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 10/161 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPRE 76
H+P + D ++ +ACG DH A + + ++SWG G G+LG+ +S +D + P
Sbjct: 46 HLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNS-SDLFV-PHP 103
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I+AL GL + QI+ G H A T DG +Y+WG N GQ+G+ D +V PH +
Sbjct: 104 IKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV--PHKL----- 156
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + V +A G+ HT A+ D L+G GW Y L +G
Sbjct: 157 LAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLG 197
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 8/164 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + D + +ACG+ H +A++Q G ++++G GQLG+ ++ P ++
Sbjct: 204 LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYAD--HLLPHQVA 261
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL+ + Q+S G H+ A T+ G LY WGWN GQVG G + D H
Sbjct: 262 ALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVG-SGDV-----DDHTSPQLISIP 315
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
Q+ +VV V+CG RHT+A+ D N+++ G QL G V +
Sbjct: 316 GQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDR 359
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++ G H +AL +V S+G G GQLG+ + D ++ PR I AL+ + ++ G
Sbjct: 10 VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDA-EDRHL-PRIIGALNDCEISLVACGAD 67
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A + +Y+WGW + G++G DL V PHP+ Q +++ +ACG
Sbjct: 68 HTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFV--PHPIK-----ALQGLEIRQIACGDS 120
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LA+ D ++ G N+ QL +G
Sbjct: 121 HCLAVTADGEVYSWGRNQNGQLGLG 145
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 91/159 (57%), Gaps = 9/159 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + L + IACG HCLA+T EG V SWG GQLG + T+ ++ P++I+
Sbjct: 109 IPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGN--TEDSLVPQKIQ 166
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
A G+ + ++AG HS A T++G LY WGW G +G+ + D +P +S S D D
Sbjct: 167 AFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDR--WNPEKVS-SVDCD 223
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
K+V VACG RHT+++ ++ GW++Y QL G
Sbjct: 224 ----KMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHG 258
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 10/160 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P+++ + IACG DH LA ++ ++SWG G G+LG+ +S +D + P+ I
Sbjct: 56 LPTQLSALDAQHIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNS-SDL-LIPQPI 113
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL GL + QI+ G H A T +G + +WG N GQ+G+ D +V P + + F
Sbjct: 114 IALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLV--PQKI---QAF 168
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
IK+ VA G+ H++A+ ++ L+G GW Y L +G
Sbjct: 169 KGVPIKM--VAAGAEHSVAITENGELYGWGWGRYGNLGLG 206
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 89/160 (55%), Gaps = 11/160 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG+ H ++++ G ++++G GQLG+ + + ++ P++++ALS + Q+S G
Sbjct: 228 VACGWRHTISVSSSGGIYTYGWSKYGQLGHGN--FEDSLVPQKLQALSDKLISQVSGGWR 285
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A T G L+ WGWN GQVGV LD H F Q+ +VV ++CG RH
Sbjct: 286 HSMALTSTGLLFGWGWNKFGQVGVGDNLD------HCSPVQVKF-PQDQRVVQISCGWRH 338
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQVS--VMTRLSV 191
T+A+ + +++ G QL G + + S ++ LSV
Sbjct: 339 TIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALSV 378
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL +V SWG G GQLG+ TD P ++ AL + I+ G
Sbjct: 19 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGD--TDDRPLPTQLSALDAQHIDSIACGAD 76
Query: 94 HSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A ++ LY+WGW + G++G DL++ P P+ Q +++ +ACG
Sbjct: 77 HTLAYSESRNELYSWGWGDFGRLGHGNSSDLLI--PQPI-----IALQGLRIKQIACGDS 129
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LA+ + + G N+ QL +G
Sbjct: 130 HCLAVTMEGEVQSWGRNQNGQLGLG 154
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PR 75
+P ++ D +++ ++ G+ H +ALT G++F WG GQ+G N++ P
Sbjct: 265 VPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGD-----NLDHCSPV 319
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+++ VVQIS G H+ A T+ +++WG GQ+G
Sbjct: 320 QVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLG 360
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D V I+CG+ H +A+T++ VFSWG G+ GQLG+ + D N P+ I A
Sbjct: 318 PVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDT-IDRN-SPKIIEA 375
Query: 80 LS 81
LS
Sbjct: 376 LS 377
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+ ISAG H+ A + +WG GQ+G G D P P S D+Q+I
Sbjct: 16 VLLISAGASHTVALLSGNVVCSWGRGEDGQLG-HGDTD---DRPLPTQLSA-LDAQHID- 69
Query: 145 VDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMG 177
+ACG+ HTLA + N L+ GW ++ +L G
Sbjct: 70 -SIACGADHTLAYSESRNELYSWGWGDFGRLGHG 102
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+ + IACG HCLA+T EG V SWG GQLG T+ ++ P++I+A G+ + +
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGD--TEDSLVPQKIQAFEGIRIKMV 177
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+AG H+AA T+DG LY WGW G +G+ + D +V + + E K+ VA
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGE-------KMSMVA 230
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG RHT+++ +L+ GW++Y QL G
Sbjct: 231 CGWRHTISVSYSGALYTYGWSKYGQLGHG 259
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P R+ ++ +ACG+ H ++++ G ++++G GQLG+ + ++ P ++
Sbjct: 214 VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD--LEDHLVPHKLE 271
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL + QIS G H+ A T DG LY WGWN GQVGV LD P + +D
Sbjct: 272 ALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQC--SPVQVRIPDDQ- 328
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
KVV V+CG RHTLA+ + N+++ G QL +G
Sbjct: 329 ----KVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 363
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 10/159 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+++ D + + CG DH +A ++ + V+SWG G G+LG+ +S +D P I+
Sbjct: 58 PTQLSALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNS-SDL-FTPLPIK 115
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ + QI+ G H A T +G + +WG N GQ+G+ D +V P + + F+
Sbjct: 116 ALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKI---QAFE 170
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
IK+ VA G+ HT A+ +D L+G GW Y L +G
Sbjct: 171 GIRIKM--VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 207
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL IV SWG G GQLG+ + + + P ++ AL +V ++ G
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDA--EDRLSPTQLSALDDHQIVSVTCGAD 77
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A ++ +Y+WGW + G++G DL P P+ I++ +ACG
Sbjct: 78 HTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFT--PLPIK-----ALHGIRIKQIACGDS 130
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LA+ + + G N+ QL +G
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGLG 155
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P +++ + V++ I+ G+ H +ALT +G ++ WG GQ+G G + + P ++
Sbjct: 266 VPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV---GNNLDQCSPVQV 322
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD 122
R VVQ+S G H+ A T+ ++AWG GQ+G+ LD
Sbjct: 323 RIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLD 367
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS 81
D V ++CG+ H LA+T+ VF+WG G+ GQLG S D N P+ I ALS
Sbjct: 327 DQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGES-LDRNF-PKIIEALS 378
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+ + IACG HCLA+T EG V SWG GQLG T+ ++ P++I+A G+ + +
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGD--TEDSLVPQKIQAFEGIRIKMV 177
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+AG H+AA T+DG LY WGW G +G+ + D +V + + E K+ VA
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGE-------KMSMVA 230
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG RHT+++ +L+ GW++Y QL G
Sbjct: 231 CGWRHTISVSYSGALYTYGWSKYGQLGHG 259
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P R+ ++ +ACG+ H ++++ G ++++G GQLG+ + ++ P ++
Sbjct: 214 VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD--LEDHLIPHKLE 271
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
ALS + QIS G H+ A T DG LY WGWN GQVGV LD P + + +D
Sbjct: 272 ALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQC--SPVQVRFPDDQ- 328
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ--VSVMTRLSVP---- 192
KVV V+CG RHTLA+ + N+++ G QL +G V + ++ LSV
Sbjct: 329 ----KVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASG 384
Query: 193 EHVKNCPIVKLFAEHWNS 210
+H+++ I + W S
Sbjct: 385 QHIESSNIDPSSGKSWVS 402
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 88/159 (55%), Gaps = 10/159 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+++ + + CG DH +A +Q G+ V+SWG G G+LG+ +S +D P I+
Sbjct: 58 PTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS-SDL-FTPLPIK 115
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ + QI+ G H A T +G + +WG N GQ+G+ D +V P + + F+
Sbjct: 116 ALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKI---QAFE 170
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
IK+ VA G+ HT A+ +D L+G GW Y L +G
Sbjct: 171 GIRIKM--VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 207
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL IV SWG G GQLG+ + + P ++ AL G +V ++ G
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDA--EDRPSPTQLSALDGHQIVSVTCGAD 77
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A +Q G +Y+WGW + G++G DL P P+ I++ +ACG
Sbjct: 78 HTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFT--PLPIK-----ALHGIRIKQIACGDS 130
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LA+ + + G N+ QL +G
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGLG 155
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 100 bits (249), Expect = 5e-19, Method: Composition-based stats.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 13/185 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
LS P ++ + + I+CG H LAL+++G VFSWG GQLG S +
Sbjct: 121 LSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIIN-QA 179
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P+ +++L G+ +VQ++AGG S A + G ++AWG NN GQ+G + PH ++
Sbjct: 180 TPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVN 239
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
+N+ V ++CG HT L D S++ G + + QL G + SVP
Sbjct: 240 -----SLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSG-------NQTSVP 287
Query: 193 EHVKN 197
+ +++
Sbjct: 288 QKIED 292
Score = 90.1 bits (222), Expect = 6e-16, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DI+CG +H +A++ EG ++SWG+GS GQLG + + N P++I L ++QIS
Sbjct: 86 IVDISCGTNHSVAVSDEGSIYSWGDGSEGQLG-TGNLSSRNFTPKKITGLFNTKIIQISC 144
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HS A ++DG +++WG N GQ+G+ + +++ P + I +V V G
Sbjct: 145 GNFHSLALSEDGRVFSWGQNKCGQLGLGSQ---IINQATPQLVKS---LKGIPLVQVTAG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
+ AL +++ G N QL
Sbjct: 199 GSQSFALSMSGTVFAWGKNNAGQL 222
Score = 83.2 bits (204), Expect = 8e-14, Method: Composition-based stats.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 13/185 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++CG H L L ++G + S G GQLG S+ N +I +L +V IS
Sbjct: 36 VQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKSN----NSSIEQISSLEAQTIVDISC 91
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A + +G +Y+WG + GQ+G +L + P + F N K++ ++CG
Sbjct: 92 GTNHSVAVSDEGSIYSWGDGSEGQLGTG---NLSSRNFTPKKITGLF---NTKIIQISCG 145
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNS 210
+ H+LAL +D ++ G N+ QL +G SQ+ + + +K P+V++ A S
Sbjct: 146 NFHSLALSEDGRVFSWGQNKCGQLGLG---SQIINQATPQLVKSLKGIPLVQVTAGGSQS 202
Query: 211 ARLSV 215
LS+
Sbjct: 203 FALSM 207
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 8 GPLKMLSQVFHM--PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
G L + SQ+ + P + + + + G AL+ G VF+WG + GQLG+ S
Sbjct: 167 GQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKS 226
Query: 66 SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
+P + +L LGV IS G H+A ++DG +Y +G + GQ+G V
Sbjct: 227 DPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSV 286
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTL 155
P + ED+ Q V VACG HTL
Sbjct: 287 --PQKI---EDYAGQ---VSQVACGRYHTL 308
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+Y WG N GQ+ + VVH ++ F SQ V V+CG +HTL L +D +L
Sbjct: 1 MYCWGDNCFGQLALLQGEKEVVH----FKENDYFQSQEC-VQKVSCGEKHTLYLLEDGTL 55
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRL 189
CG N Y QL S + ++ L
Sbjct: 56 LSCGQNPYGQLGRKSNNSSIEQISSL 81
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
+ +P ++ + + +ACG H +AL+++G VFSWG S GQLG +PS +
Sbjct: 112 FKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG NN GQ+ + G + V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGN-NAPVQRY 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S + + VV ++CG +HT L D ++ G N Y QL
Sbjct: 226 KPVSIGA---LKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQL 268
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L V ++CG +H LA+ +G VF+WG S GQLG + P++I+
Sbjct: 66 PERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIKT 124
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G+ ++Q++ G +HS A ++DG +++WG N+ GQ+G+ + P S
Sbjct: 125 LAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEF------PSQASPQRVRSL 178
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 179 EGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQLAL 215
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L +G V S G+ SRGQLG GT +P I AL L V +S G H
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLHVALVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ P + IK++ VACG H+
Sbjct: 87 SLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIK-----TLAGIKIIQVACGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
+AL +D ++ G N + QL +G
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLG 163
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 73/145 (50%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ + GQL SG +A ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQLAL--SGNNAPVQRYKPVS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL LGVV IS G H+A TQDG ++ +G N+ GQ+G HDP +E
Sbjct: 230 IGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG---------HDP----TAEK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ ++ + CGS HTLA
Sbjct: 277 RGPQLVERIEGLVSQIDCGSDHTLA 301
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 14/145 (9%)
Query: 74 PREIRALS----GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
PR +R G ++Q ++G HS DG + + G N+ GQ+G +G P
Sbjct: 10 PRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKG-------TPR 62
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ + V V+CG H+LA+C ++ G QL +G + ++
Sbjct: 63 GEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122
Query: 190 SVPEHVKNCPIVKLFAEHWNSARLS 214
+K I+++ H++S LS
Sbjct: 123 KTLAGIK---IIQVACGHYHSVALS 144
>gi|74140640|dbj|BAB27358.3| unnamed protein product [Mus musculus]
Length = 576
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
++ MP+++ + + ++CG H LAL+++G VFSWG S GQLG + +
Sbjct: 38 FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQA 96
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLVVHDPHPM 131
P+++++L G+ + Q++AGG HS A + G + WG N GQ+ + G K+ ++ PH +
Sbjct: 97 IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI 156
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L ++ ++ G N QL
Sbjct: 157 G-----ALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 194
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 82/143 (57%), Gaps = 7/143 (4%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++CG +H +A+ +G VF+WG GS GQLG + + P +I+AL+G+ ++Q+S G +
Sbjct: 6 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKIIQVSCGHY 64
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A ++DG +++WG N+ GQ+G+ GK P + E I + VA G H
Sbjct: 65 HSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSLE-----GIPLAQVAAGGTH 118
Query: 154 TLALCDDNSLWGCGWNEYNQLSM 176
+ AL + +G G N QL++
Sbjct: 119 SFALSLTGTSFGWGSNRSGQLAL 141
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+S G HS A G ++AWG + GQ+G+ G+ + P + IK++ V
Sbjct: 6 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIK-----ALAGIKIIQV 59
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG H+LAL +D ++ G N QL +G
Sbjct: 60 SCGHYHSLALSEDGHVFSWGRNSEGQLGLG 89
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-YPSSGTD 69
K+ Q++ P + +L V I+CG++H LT+EG VF++G S GQL P SG
Sbjct: 145 KVKEQIYK-PHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQR 203
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
P+ I + G V QI +H+ A ++Y G
Sbjct: 204 G---PQLIEGIGG-RVSQIECASYHTIA-----YVYTTG 233
>gi|328791214|ref|XP_625074.3| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
mellifera]
Length = 502
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR- 78
P + + + + DIACG H LALT +G V++WG + GQ+G T PR++
Sbjct: 120 PGIITNLCNEFIIDIACGSHHSLALTNDGEVYAWGQNTSGQVGCHDDTTLVQDIPRKLNF 179
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L+G V+ IS G S T +G +Y+WG N+ GQ+G+E D HP +
Sbjct: 180 TLTGKKVICISCGDSFSVVVTNNGEVYSWGCNDVGQLGIENNNDQF----HPCKIT---S 232
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
I + V CGS HTLAL D+ L+ G N Y QL + + + T+L VPE +
Sbjct: 233 LAKIVIEKVVCGSIHTLALSDEGVLYVWGDNNYGQLGLTTVLLNIWKPTKLEVPEMRR-- 290
Query: 199 PIVKLFAEHWNSARLSVPE 217
++ + ++N +++ E
Sbjct: 291 -VLDIATSYYNYISIALCE 308
>gi|326680006|ref|XP_003201431.1| PREDICTED: RCC1 domain-containing protein 1 [Danio rerio]
Length = 410
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 101/200 (50%), Gaps = 29/200 (14%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
+H A+ PL V H P H L L + G +H L LT +G ++SWG+GS GQLG
Sbjct: 162 EHTAALPLVSGGFVQHKPPFF-HPLKLCAVSLVLGSEHALLLTADGTLYSWGSGSHGQLG 220
Query: 63 YPSSGTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---- 117
+ G ++E P+ + AL G+ + ++AG WHSAA + G LY WGWN GQ+G+
Sbjct: 221 H---GALTSLEDPQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPSRG 277
Query: 118 ----EGKLDLVVHDPHPMSWSED---------------FDSQNI-KVVDVACGSRHTLAL 157
+ + + +D PM+ E D N+ ++ ++CGSRHT A+
Sbjct: 278 LEEEKRRGNGSGNDDQPMNTDEKSQTDVFISIQAFPALVDIANMSEISRISCGSRHTAAV 337
Query: 158 CDDNSLWGCGWNEYNQLSMG 177
L+ GW +Y QL G
Sbjct: 338 TSAGDLYTWGWGQYGQLGHG 357
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
++ I+CG H A+T G +++WG G GQLG+ + + P + + L V +
Sbjct: 324 ISRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTEHSTDEPTPVDYFSSHSLSVKDVVC 383
Query: 91 GGWHS 95
G W++
Sbjct: 384 GSWNT 388
>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
familiaris]
Length = 1015
Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats.
Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 13/160 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P ++ D+ + ++CG H LAL++ G VFSWG+ S GQLG +PS + P
Sbjct: 118 IPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQAS-----P 172
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G + WG NN GQ+ + K ++ P S S
Sbjct: 173 QRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALH-KNNVSGQSYKPYSIS 231
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT+ L + ++ G N Y QL
Sbjct: 232 A---LKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQL 268
Score = 87.8 bits (216), Expect = 4e-15, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 7/143 (4%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++CG +H LA+ +G VF+WG GS GQLG + N+ P +I+ L+ + + Q+S G +
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLG-TGEFKETNLIPMKIKTLNDIKIKQVSCGHY 138
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A ++ G +++WG N+ GQ+G+ K P S I + VA G H
Sbjct: 139 HSLALSEGGQVFSWGSNSDGQLGLGKKF------PSQASPQRVRSLDGIPLAQVAAGGAH 192
Query: 154 TLALCDDNSLWGCGWNEYNQLSM 176
+ AL + +G G N QL++
Sbjct: 193 SFALSLSGTSFGWGRNNAGQLAL 215
Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L G V S G+ RGQLG G + + + IRAL L V +S G H
Sbjct: 29 ASGERHSLLLLSNGQVHSCGDNGRGQLG--QRGAPCSAQLKRIRALETLHVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G G+ P + D IK+ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGT-GEFKETNLIPMKIKTLND-----IKIKQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL + ++ G N QL +G
Sbjct: 141 LALSEGGQVFSWGSNSDGQLGLG 163
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 19/143 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-YPSSGTDANMEPREIR 78
P R+ + + +A G H AL+ G F WG + GQL + ++ + + +P I
Sbjct: 172 PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSIS 231
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL LGV+ IS G H+ TQ+G ++ +G N GQ+G H P +E
Sbjct: 232 ALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLG---------HSPT----AEKSG 278
Query: 139 SQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 279 PQLVEGIDGLVSQIDCGSYHTLA 301
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P + +L V I+CG++H + LTQ G VF++G+ + GQLG+ S T P+ +
Sbjct: 225 YKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGH--SPTAEKSGPQLV 282
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP-HPMSWSED 136
+ GL V QI G +H+ A ++Y G+V G+ P HP + +E+
Sbjct: 283 EGIDGL-VSQIDCGSYHTLA-----YVY-----TTGKVVSFGREPTCKSSPTHPEALTEN 331
Query: 137 FD 138
D
Sbjct: 332 VD 333
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 19/127 (14%)
Query: 51 FSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWN 110
SWG G RG P S R L G+ + Q ++G HS +G +++ G N
Sbjct: 3 LSWGPGPRG----PVS--------RRRVGLGGVELRQAASGERHSLLLLSNGQVHSCGDN 50
Query: 111 NGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
GQ+G G P + + V V+CG H+LA+C ++ G
Sbjct: 51 GRGQLGQRGA-------PCSAQLKRIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGS 103
Query: 171 YNQLSMG 177
QL G
Sbjct: 104 EGQLGTG 110
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 99.8 bits (247), Expect = 8e-19, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 17/174 (9%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P+ + VV +A G H LALT+ G +FSWG G GQLG+ S + + P+++
Sbjct: 278 YQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQ-QLAPKQL 336
Query: 78 RALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ + ++ ISAGG+HS A+ DG +YAWG ++ G +G D ++ P +
Sbjct: 337 QFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRI----- 391
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSL--WGCG-------WNEYNQLS-MGCGV 180
+ I+ ++CG +HT+AL DN++ WGCG +NE NQ + + C +
Sbjct: 392 LMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQCAPIACNI 445
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 9/165 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLAL--TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ ++ + + CG +AL T +++WGN GQLG G D P +
Sbjct: 172 PKQVVALANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESV 231
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+V + AG +A G L+ WG + G++G G + + P S +
Sbjct: 232 AVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLG-HGDTE---NRYQPTLVSSLY 287
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
VV VA G H+LAL L+ G E QL G SQ
Sbjct: 288 GHV---VVAVALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQ 329
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGG 92
+ G H ++Q G +F+WG G G+LG+ G + ++ P+++ AL+ + + + GG
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGH---GDEESISTPKQVVALANIPMKYVFCGG 190
Query: 93 WHSAA--RTQDGFLYAWGWNNGGQVG 116
+ A T LY WG N GQ+G
Sbjct: 191 RSTIALSHTAGSGLYTWGNNEFGQLG 216
Score = 40.8 bits (94), Expect = 0.53, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
++ ++AG H A +Q G L+ WG G++G G + + ++ + NI +
Sbjct: 131 IILVNAGAAHIAMISQSGKLFTWGEGQYGRLG-HGDEESISTPKQVVALA------NIPM 183
Query: 145 VDVACGSRHTLALCDD--NSLWGCGWNEYNQLSMG-CGVSQVSVMTRLSVP 192
V CG R T+AL + L+ G NE+ QL G CG + ++VP
Sbjct: 184 KYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVP 234
>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
Length = 596
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
++ MP+++ + + ++CG H LAL+++G VFSWG S GQLG + +
Sbjct: 68 FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQA 126
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLVVHDPHPM 131
P+++++L G+ + Q++AGG HS A + G + WG N GQ+ + G K+ ++ PH +
Sbjct: 127 IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI 186
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L ++ ++ G N QL
Sbjct: 187 G-----ALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 224
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 7/162 (4%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q P + DL V ++CG +H +A+ +G VF WG GS GQLG + + P
Sbjct: 17 QSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSEGQLGI-GEFKEISFMP 75
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+I+AL+G+ ++Q+S G +HS A ++DG +++WG N+ GQ+G+ GK P +
Sbjct: 76 TKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSL 134
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
E I + VA G H+ AL + +G G N QL++
Sbjct: 135 E-----GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLAL 171
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 51 FSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWN 110
+S G+ S GQLG + EP I+AL+ L V +S G HS A G ++ WG
Sbjct: 1 YSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAG 58
Query: 111 NGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
+ GQ+G+ G+ + P + IK++ V+CG H+LAL +D ++ G N
Sbjct: 59 SEGQLGI-GEFKEISFMPTKIK-----ALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNS 112
Query: 171 YNQLSMG 177
QL +G
Sbjct: 113 EGQLGLG 119
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-YPSSGTD 69
K+ Q++ P + +L V I+CG++H LT+EG VF++G S GQL P SG
Sbjct: 175 KVKEQIYK-PHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQR 233
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
P+ I + G V QI +H+ A ++Y G
Sbjct: 234 G---PQLIEGIGG-RVSQIECASYHTIA-----YVYTTG 263
>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
Length = 462
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
++ MP+++ + + ++CG H LAL+++G VFSWG S GQLG + +
Sbjct: 111 FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQA 169
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLVVHDPHPM 131
P+++++L G+ + Q++AGG HS A + G + WG N GQ+ + G K+ ++ PH +
Sbjct: 170 IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI 229
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L ++ ++ G N QL
Sbjct: 230 G-----ALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 267
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q P + DL V ++CG +H +A+ +G VF+WG GS GQLG + + P
Sbjct: 60 QSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMP 118
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+I+AL+G+ ++Q+S G +HS A ++DG +++WG N+ GQ+G+ GK P +
Sbjct: 119 TKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSL 177
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
E I + VA G H+ AL + +G G N QL++
Sbjct: 178 E-----GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLAL 214
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V+S G+ S GQLG + EP I+AL+ L V +S G H
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVSCGKEH 85
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + IK++ V+CG H+
Sbjct: 86 SVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIK-----ALAGIKIIQVSCGHYHS 139
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
LAL +D ++ G N QL +G ++ ++ E + P+ ++ A +S LS
Sbjct: 140 LALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI---PLAQVAAGGTHSFALS 196
Query: 215 V 215
+
Sbjct: 197 L 197
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAARTQDGFLYAW 107
+ FSW GSR +PR ++A SG+ ++Q ++G HS + +Y+
Sbjct: 1 MYFSWAAGSR--------------KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSC 46
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G N+ GQ+G + D P P+ D + V V+CG H++A+C ++ G
Sbjct: 47 GDNSWGQLGQ--RRDQSTERPEPIQALND-----LHVDLVSCGKEHSVAVCHKGKVFAWG 99
Query: 168 WNEYNQLSMGCGVSQVSVM-TRLSVPEHVKNCPIVKLFAEHWNSARLSVPEH 218
QL +G ++S M T++ +K I+++ H++S LS H
Sbjct: 100 AGSEGQLGIG-EFKEISFMPTKIKALAGIK---IIQVSCGHYHSLALSEDGH 147
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-YPSSGTD 69
K+ Q++ P + +L V I+CG++H LT+EG VF++G S GQL P SG
Sbjct: 218 KVKEQIY-KPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQR 276
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
P+ I + G V QI +H+ A ++Y G
Sbjct: 277 G---PQLIEGIGGR-VSQIECASYHTIA-----YVYTTG 306
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 90/159 (56%), Gaps = 9/159 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + L + IACG HCLA+T EG V SWG GQLG +S + ++ P++I+
Sbjct: 108 IPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTS--EDSLVPQKIQ 165
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
G+ + ++AG HS A T++G LY WGW G +G+ + D + P +S S D D
Sbjct: 166 TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWI--PEKVS-SVDCD 222
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
K+V VACG RHT+++ L+ GW++Y QL G
Sbjct: 223 ----KMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHG 257
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 10/160 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P+ + + IACG DH LA ++ ++SWG G G+LG+ +S +D + P+ I
Sbjct: 55 LPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNS-SDL-LIPQPI 112
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL GL + QI+ G H A T +G + +WG N GQ+G+ D +V P + + F
Sbjct: 113 IALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLV--PQKI---QTF 167
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
IK+ VA G+ H++A+ ++ L+G GW Y L +G
Sbjct: 168 QGVPIKM--VAAGAEHSVAITENGELYGWGWGRYGNLGLG 205
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 19/164 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG+ H ++++ G ++++G GQLG+ + + ++ P++++ALS + Q+S G
Sbjct: 227 VACGWRHTISVSSLGGLYTYGWSKYGQLGHGN--FEDSLVPQKLQALSDKLISQVSGGWR 284
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLD----LVVHDPHPMSWSEDFDSQNIKVVDVAC 149
HS A T G LY WGWN GQVGV +D + V PH + KVV ++C
Sbjct: 285 HSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPH-----------DQKVVQISC 333
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS--VMTRLSV 191
G RHT+A+ + +++ G QL G V + S ++ LSV
Sbjct: 334 GWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALSV 377
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 22/180 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL +V SWG G GQLG+ TD + P + AL + I+ G
Sbjct: 18 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGD--TDDRLLPTHLSALDAQQIDSIACGAD 75
Query: 94 HSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A ++ LY+WGW + G++G DL++ P P+ Q +++ +ACG
Sbjct: 76 HTLAYSESRNELYSWGWGDFGRLGHGNSSDLLI--PQPI-----IALQGLRIKQIACGDS 128
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN---CPI--VKLFAEH 207
H LA+ + + G N+ QL G G S+ S+ VP+ ++ PI V AEH
Sbjct: 129 HCLAVTMEGEVQSWGRNQNGQL--GLGTSEDSL-----VPQKIQTFQGVPIKMVAAGAEH 181
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PRE 76
+P ++ F + + +A G +H +A+T+ G ++ WG G G LG D N P +
Sbjct: 160 VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGL----GDRNDRWIPEK 215
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ ++ +V ++ G H+ + + G LY +GW+ GQ+G G + + + S+
Sbjct: 216 VSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLG-HGNFEDSLVPQKLQALSDK 274
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
SQ V+ G RH++AL L+G GWN++ Q+ +G V + S
Sbjct: 275 LISQ------VSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCS 316
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P ++ D +++ ++ G+ H +ALT G+++ WG GQ+G G + + P ++
Sbjct: 264 VPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGV---GDNVDRCSPVQV 320
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+ VVQIS G H+ A T+ +++WG GQ+G
Sbjct: 321 KFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLG 359
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D V I+CG+ H +A+T++ VFSWG G+ GQLG+ + D N P+ I A
Sbjct: 317 PVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDT-VDRN-SPKIIEA 374
Query: 80 LS 81
LS
Sbjct: 375 LS 376
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+ ISAG H+ A + +WG GQ+G G D + H + D+Q I
Sbjct: 15 VLLISAGASHTVALLSGNVVCSWGRGEDGQLG-HGDTDDRLLPTHLSA----LDAQQID- 68
Query: 145 VDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMG 177
+ACG+ HTLA + N L+ GW ++ +L G
Sbjct: 69 -SIACGADHTLAYSESRNELYSWGWGDFGRLGHG 101
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 90/159 (56%), Gaps = 9/159 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + L + IACG HCLA+T EG V SWG GQLG +S + ++ P++I+
Sbjct: 108 IPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTS--EDSLVPQKIQ 165
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
G+ + ++AG HS A T++G LY WGW G +G+ + D + P +S S D D
Sbjct: 166 TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWI--PEKVS-SVDCD 222
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
K+V VACG RHT+++ L+ GW++Y QL G
Sbjct: 223 ----KMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHG 257
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 10/160 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P+ + + IACG DH LA ++ ++SWG G G+LG+ +S +D + P+ I
Sbjct: 55 LPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNS-SDL-LIPQPI 112
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL GL + QI+ G H A T +G + +WG N GQ+G+ D +V P + + F
Sbjct: 113 IALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLV--PQKI---QTF 167
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
IK+ VA G+ H++A+ ++ L+G GW Y L +G
Sbjct: 168 QGVPIKM--VAAGAEHSVAITENGELYGWGWGRYGNLGLG 205
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 19/164 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG+ H ++++ G ++++G GQLG+ + + ++ P++++ALS + Q+S G
Sbjct: 227 VACGWRHTISVSSLGGLYTYGWSKYGQLGHGN--FEDSLVPQKLQALSDKLISQVSGGWR 284
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLD----LVVHDPHPMSWSEDFDSQNIKVVDVAC 149
HS A T G LY WGWN GQVGV +D + V PH + KVV ++C
Sbjct: 285 HSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPH-----------DQKVVQISC 333
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS--VMTRLSV 191
G RHT+A+ + +++ G QL G V + S ++ LSV
Sbjct: 334 GWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALSV 377
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 22/180 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL +V SWG G GQLG+ TD + P + AL + I+ G
Sbjct: 18 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGD--TDDRLLPTHLSALDAQQIDSIACGAD 75
Query: 94 HSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A ++ LY+WGW + G++G DL++ P P+ Q +++ +ACG
Sbjct: 76 HTLAYSESRNELYSWGWGDFGRLGHGNSSDLLI--PQPI-----IALQGLRIKQIACGDS 128
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN---CPI--VKLFAEH 207
H LA+ + + G N+ QL G G S+ S+ VP+ ++ PI V AEH
Sbjct: 129 HCLAVTMEGEVQSWGRNQNGQL--GLGTSEDSL-----VPQKIQTFQGVPIKMVAAGAEH 181
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PRE 76
+P ++ F + + +A G +H +A+T+ G ++ WG G G LG D N P +
Sbjct: 160 VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGL----GDRNDRWIPEK 215
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ ++ +V ++ G H+ + + G LY +GW+ GQ+G G + + + S+
Sbjct: 216 VSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLG-HGNFEDSLVPQKLQALSDK 274
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
SQ V+ G RH++AL L+G GWN++ Q+ +G V + S
Sbjct: 275 LISQ------VSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCS 316
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P ++ D +++ ++ G+ H +ALT G+++ WG GQ+G G + + P ++
Sbjct: 264 VPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGV---GDNVDRCSPVQV 320
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+ VVQIS G H+ A T+ +++WG GQ+G
Sbjct: 321 KFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLG 359
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D V I+CG+ H +A+T++ VFSWG G+ GQLG+ + D N P+ I A
Sbjct: 317 PVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDT-VDRN-SPKIIEA 374
Query: 80 LS 81
LS
Sbjct: 375 LS 376
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+ ISAG H+ A + +WG GQ+G G D + H + D+Q I
Sbjct: 15 VLLISAGASHTVALLSGNVVCSWGRGEDGQLG-HGDTDDRLLPTHLSA----LDAQQID- 68
Query: 145 VDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMG 177
+ACG+ HTLA + N L+ GW ++ +L G
Sbjct: 69 -SIACGADHTLAYSESRNELYSWGWGDFGRLGHG 101
>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
Length = 1003
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
++ MP+++ + + ++CG H LAL+++G VFSWG S GQLG + +
Sbjct: 111 FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQA 169
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLVVHDPHPM 131
P+++++L G+ + Q++AGG HS A + G + WG N GQ+ + G K+ ++ PH +
Sbjct: 170 IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI 229
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L ++ ++ G N QL
Sbjct: 230 G-----ALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 267
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q P + DL V ++CG +H +A+ +G VF+WG GS GQLG + + P
Sbjct: 60 QSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMP 118
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+I+AL+G+ ++Q+S G +HS A ++DG +++WG N+ GQ+G+ GK P +
Sbjct: 119 TKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSL 177
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
E I + VA G H+ AL + +G G N QL++
Sbjct: 178 E-----GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLAL 214
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V+S G+ S GQLG + EP I+AL+ L V +S G H
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVSCGKEH 85
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + IK++ V+CG H+
Sbjct: 86 SVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIK-----ALAGIKIIQVSCGHYHS 139
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL +D ++ G N QL +G
Sbjct: 140 LALSEDGHVFSWGRNSEGQLGLG 162
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 27/173 (15%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAARTQDGFLYAW 107
+ FSW GSR +PR ++A SG+ ++Q ++G HS + +Y+
Sbjct: 1 MYFSWAAGSR--------------KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSC 46
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G N+ GQ+G + D P P+ D + V V+CG H++A+C ++ G
Sbjct: 47 GDNSWGQLG--QRRDQSTERPEPIQALND-----LHVDLVSCGKEHSVAVCHKGKVFAWG 99
Query: 168 WNEYNQLSMGCGVSQVSVM-TRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHA 219
QL +G ++S M T++ +K I+++ H++S LS H
Sbjct: 100 AGSEGQLGIG-EFKEISFMPTKIKALAGIK---IIQVSCGHYHSLALSEDGHV 148
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-YPSSGTD 69
K+ Q++ P + +L V I+CG++H LT+EG VF++G S GQL P SG
Sbjct: 218 KVKEQIYK-PHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQR 276
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAA 97
P+ I + G V QI +H+ A
Sbjct: 277 G---PQLIEGIGG-RVSQIECASYHTIA 300
>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
Length = 926
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
++ MP+++ + + ++CG H LAL+++G VFSWG S GQLG + +
Sbjct: 111 FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQA 169
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLVVHDPHPM 131
P+++++L G+ + Q++AGG HS A + G + WG N GQ+ + G K+ ++ PH +
Sbjct: 170 IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI 229
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L ++ ++ G N QL
Sbjct: 230 G-----ALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 267
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q P + DL V ++CG +H +A+ +G VF+WG GS GQLG + + P
Sbjct: 60 QSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMP 118
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+I+AL+G+ ++Q+S G +HS A ++DG +++WG N+ GQ+G+ GK P +
Sbjct: 119 TKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSL 177
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
E I + VA G H+ AL + +G G N QL++
Sbjct: 178 E-----GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLAL 214
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V+S G+ S GQLG + EP I+AL+ L V +S G H
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVSCGKEH 85
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + IK++ V+CG H+
Sbjct: 86 SVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIK-----ALAGIKIIQVSCGHYHS 139
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL +D ++ G N QL +G
Sbjct: 140 LALSEDGHVFSWGRNSEGQLGLG 162
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 27/173 (15%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAARTQDGFLYAW 107
+ FSW GSR +PR ++A SG+ ++Q ++G HS + +Y+
Sbjct: 1 MYFSWAAGSR--------------KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSC 46
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G N+ GQ+G + D P P+ D + V V+CG H++A+C ++ G
Sbjct: 47 GDNSWGQLG--QRRDQSTERPEPIQALND-----LHVDLVSCGKEHSVAVCHKGKVFAWG 99
Query: 168 WNEYNQLSMGCGVSQVSVM-TRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHA 219
QL +G ++S M T++ +K I+++ H++S LS H
Sbjct: 100 AGSEGQLGIG-EFKEISFMPTKIKALAGIK---IIQVSCGHYHSLALSEDGHV 148
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-YPSSGTD 69
K+ Q++ P + +L V I+CG++H LT+EG VF++G S GQL P SG
Sbjct: 218 KVKEQIYK-PHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQR 276
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAA 97
P+ I + G V QI +H+ A
Sbjct: 277 G---PQLIEGIGG-RVSQIECASYHTIA 300
>gi|195390315|ref|XP_002053814.1| GJ23136 [Drosophila virilis]
gi|194151900|gb|EDW67334.1| GJ23136 [Drosophila virilis]
Length = 371
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 101/196 (51%), Gaps = 20/196 (10%)
Query: 16 VFHMPSRMDHFLDL--VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
V+ +PS + F V + CG +H L L G V+SWGNG RGQLG+ T A +E
Sbjct: 164 VYSIPSCLHQFPQRQWRVQQLECGHEHALLLNGNGDVYSWGNGLRGQLGHE---TLAVVE 220
Query: 74 -PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLVVHDP--H 129
P + AL+G+ + I+AGGWHS A + G LY WG N GQ+GV K D ++ +P +
Sbjct: 221 TPLLLEALAGIKITHIAAGGWHSVAISAFGDLYTWGLNCKGQLGVRVMKPDGLLKEPTVY 280
Query: 130 PMSWSEDF------DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
P+ D ++ + V GSRHTL L LW GW + QL +Q
Sbjct: 281 PLPQLHDLPDCCGVENDACAPLKVFAGSRHTLLLRSCGRLWASGWCAHGQLG-----TQP 335
Query: 184 SVMTRLSVPEHVKNCP 199
+ + L + + V++ P
Sbjct: 336 TKLEYLDIFQAVRDTP 351
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 14/161 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY----PSSGTDANMEP 74
+P ++ D+ + ++CG H LAL+++G +F+WG+ S GQLG PS + P
Sbjct: 118 IPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQAS-----P 172
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ ++ L G+ + Q++AGG HS A + G + WG N+ GQ+ + K VV P S
Sbjct: 173 QRVQFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCS-- 230
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D+ +N+ VV ++CG HT L ++ G N Y QL
Sbjct: 231 --VDALENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQL 269
Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats.
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L V ++CG +H LA+ +G VF+WG GS GQLG + N+ PR+I+
Sbjct: 66 PKRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGI-GEFNEINLIPRKIKT 124
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ + ++Q+S G HS A ++DG L+ WG N+ GQ+G+ GK P + + +
Sbjct: 125 LTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGL-GKECPSQASPQRVQFLD---- 179
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + VA G H+ AL + +G G N QL++
Sbjct: 180 -GIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLAL 215
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L G + S+G+ S GQLG +P+ I AL L V +S G H
Sbjct: 29 ASGERHSLLLLSNGELHSYGDNSHGQLG--RRDVQRQEQPKRIPALETLRVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + + P + D IK++ V+CG H+
Sbjct: 87 SLAVCYKGRVFAWGAGSEGQLGI-GEFNEINLIPRKIKTLTD-----IKIIQVSCGHHHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL +D L+ G N + QL +G
Sbjct: 141 LALSEDGRLFTWGSNSHGQLGLG 163
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 51/143 (35%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 20 PSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA--NMEPRE 76
P R+ FLD + +T +A G H AL+ G F WG+ S GQL + +P
Sbjct: 172 PQRV-QFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCS 230
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSW 133
+ AL LGVV IS G H+A TQ G ++ +G N+ GQ+G GK P +
Sbjct: 231 VDALENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGK-----EGPQLVEG 285
Query: 134 SEDFDSQNIKVVDVACGSRHTLA 156
+ SQ + CGS HTLA
Sbjct: 286 IDGLVSQ------IDCGSYHTLA 302
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
+ +P ++ + + +ACG H +AL+++G VFSWG S GQLG +PS +
Sbjct: 112 FKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G + V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGN-NAPVQRY 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S + + VV ++CG +HT L D ++ G N Y QL
Sbjct: 226 KPVSIGA---LKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQL 268
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L V ++CG +H LA+ +G VF+WG S GQLG + P++I+
Sbjct: 66 PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIKT 124
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G+ ++Q++ G +HS A ++DG +++WG N+ GQ+G+ + P S
Sbjct: 125 LAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEF------PSQASPQRVRSL 178
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 179 EGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL 215
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L +G V S G+ SRGQLG GT +P I AL L V +S G H
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ P + IK++ VACG H+
Sbjct: 87 SLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIK-----TLAGIKIIQVACGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
+AL +D ++ G N + QL +G
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLG 163
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 73/145 (50%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG +A ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL--SGNNAPVQRYKPVS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL LGVV IS G H+A TQDG ++ +G N+ GQ+G HDP +E
Sbjct: 230 IGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG---------HDP----TAEK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ ++ + CGS HTLA
Sbjct: 277 RGPQLVERIEGLVSQIDCGSDHTLA 301
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G ++Q ++G HS DG + + G N+ GQ+G +G P +
Sbjct: 22 GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKG-------TPRGEQPERIPALET 74
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
+ V V+CG H+LA+C ++ G QL +G + ++ +K I+
Sbjct: 75 LNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIK---II 131
Query: 202 KLFAEHWNSARLS 214
++ H++S LS
Sbjct: 132 QVACGHYHSVALS 144
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
+ +P ++ + + +ACG H +AL+++G VFSWG S GQLG +PS +
Sbjct: 112 FKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G + V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGN-NAPVQRY 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S + + VV ++CG +HT L D ++ G N Y QL
Sbjct: 226 KPVSIGA---LKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQL 268
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L V ++CG +H LA+ +G VF+WG S GQLG + P++I+
Sbjct: 66 PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIKT 124
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G+ ++Q++ G +HS A ++DG +++WG N+ GQ+G+ + P S
Sbjct: 125 LAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEF------PSQASPQRVRSL 178
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 179 EGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL 215
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L +G V S G+ SRGQLG GT +P I AL L V +S G H
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ P + IK++ VACG H+
Sbjct: 87 SLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIK-----TLAGIKIIQVACGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
+AL +D ++ G N + QL +G
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLG 163
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 73/145 (50%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG +A ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL--SGNNAPVQRYKPVS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL LGVV IS G H+A TQDG ++ +G N+ GQ+G HDP +E
Sbjct: 230 IGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG---------HDP----TAEK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ ++ + CGS HTLA
Sbjct: 277 RGPQLVERIEGLVSQIDCGSDHTLA 301
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G ++Q ++G HS DG + + G N+ GQ+G +G P +
Sbjct: 22 GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKG-------TPRGEQPERIPALET 74
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
+ V V+CG H+LA+C ++ G QL +G + ++ +K I+
Sbjct: 75 LNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIK---II 131
Query: 202 KLFAEHWNSARLS 214
++ H++S LS
Sbjct: 132 QVACGHYHSVALS 144
>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6-like [Ailuropoda melanoleuca]
Length = 1189
Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 15/161 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY----PSSGTDANMEP 74
+P+++ + + ++CG H LAL++ G VFSWG+ S GQLG PS + P
Sbjct: 118 IPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQAS-----P 172
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSW 133
+ +R+L G+ + Q++AGG HS A + G + WG NN GQ+ + + + + H P +
Sbjct: 173 QRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIG- 231
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L ++ G N Y QL
Sbjct: 232 ----ALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQL 268
Score = 93.2 bits (230), Expect = 9e-17, Method: Composition-based stats.
Identities = 54/157 (34%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ +L V ++CG +H LA+ +G VF+WG GS GQLG + N+ P +I+
Sbjct: 66 PKRIRTLDNLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGV-GEFKEINLIPTKIKT 124
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G+ ++Q+S G +HS A ++ G +++WG N+ GQ+G+ GK P S
Sbjct: 125 LTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGL-GK-----ECPSQASPQRVRSL 178
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + VA G H+ AL + +G G N QL++
Sbjct: 179 DGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLAL 215
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L G + S G+ S+GQLG G + P+ IR L L V +S G H
Sbjct: 29 ASGERHSLLLLSNGELHSCGDNSQGQLG--RKGVQRDEHPKRIRTLDNLRVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+GV G+ + P + IK++ V+CG H+
Sbjct: 87 SLAVCYKGRVFAWGAGSEGQLGV-GEFKEINLIPTKIK-----TLTGIKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL + ++ G N + QL +G
Sbjct: 141 LALSEGGQVFSWGSNSHGQLGLG 163
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 70/143 (48%), Gaps = 19/143 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA-NMEPREIR 78
P R+ + +T +A G H AL+ G F WG+ + GQL + + +PR I
Sbjct: 172 PQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIG 231
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL LGV+ IS G H+A TQ G ++ +G N+ GQ+G H P +E
Sbjct: 232 ALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLG---------HSPT----AEKEG 278
Query: 139 SQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 279 PQLVEGIDGLVSQIDCGSYHTLA 301
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H P + +L V I+CG++H LTQ G VF++G S GQLG+ S T P+ +
Sbjct: 225 HKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGH--SPTAEKEGPQLV 282
Query: 78 RALSGLGVVQISAGGWHSAA 97
+ GL V QI G +H+ A
Sbjct: 283 EGIDGL-VSQIDCGSYHTLA 301
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 63 YPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
Y GT PR +A +G + Q ++G HS +G L++ G N+ GQ+G +G
Sbjct: 2 YLCWGTSPRGPPRRRQAGXAGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKG-- 59
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
V D HP N++V V+CG H+LA+C ++ G QL +G
Sbjct: 60 --VQRDEHPKRIRT---LDNLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKE 114
Query: 182 QVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
+ T++ +K I+++ H++S LS
Sbjct: 115 INLIPTKIKTLTGIK---IIQVSCGHYHSLALS 144
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
+ +P ++ + + +ACG H +AL+++G VFSWG S GQLG +PS +
Sbjct: 112 FKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G + V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGN-NAPVQRY 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S + + VV ++CG +HT L D ++ G N Y QL
Sbjct: 226 KPVSIGA---LKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQL 268
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L V ++CG +H LA+ +G VF+WG S GQLG + P++I+
Sbjct: 66 PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIKT 124
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G+ ++Q++ G +HS A ++DG +++WG N+ GQ+G+ + P S
Sbjct: 125 LAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEF------PSQASPQRVRSL 178
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 179 EGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL 215
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L +G V S G+ SRGQLG GT +P I AL L V +S G H
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ P + IK++ VACG H+
Sbjct: 87 SLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIK-----TLAGIKIIQVACGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
+AL +D ++ G N + QL +G
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLG 163
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 73/145 (50%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG +A ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL--SGNNAPVQRYKPVS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL LGVV IS G H+A TQDG ++ +G N+ GQ+G HDP +E
Sbjct: 230 IGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG---------HDP----TAEK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ ++ + CGS HTLA
Sbjct: 277 RGPQLVERIEGLVSQIDCGSDHTLA 301
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G ++Q ++G HS DG + + G N+ GQ+G +G P +
Sbjct: 22 GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKG-------TPRGEQPERIPALET 74
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
+ V V+CG H+LA+C ++ G QL +G + ++ +K I+
Sbjct: 75 LNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIK---II 131
Query: 202 KLFAEHWNSARLS 214
++ H++S LS
Sbjct: 132 QVACGHYHSVALS 144
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 97.8 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 60/182 (32%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 19 MPSRMDHFL----DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+P++ F+ + +VT ++CG H LALT G VFSWG+ S GQLG+ + P
Sbjct: 75 LPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQLGH-DTDLQTYTTP 133
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R I+ ++ VVQI++G +HS A T G L++WG N GQ+G+ + VV S +
Sbjct: 134 RMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLA 193
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG-----CGVSQVSVMTRL 189
I + +ACG H+ A+ +++G G N + QL + C Q+ + L
Sbjct: 194 ------GIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRCFPQQLKTLRNL 247
Query: 190 SV 191
V
Sbjct: 248 GV 249
Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats.
Identities = 56/162 (34%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P MD V ACG H L LT++G +FS GN GQLG+ + N P+ I
Sbjct: 26 LPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHDTDCL-PNKRPQFIS 84
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+L V +S G HS A T G +++WG N+ GQ+G HD +++
Sbjct: 85 SLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQLG---------HDTDLQTYTTPRM 135
Query: 139 SQNI---KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ I VV +A G H+LAL + L+ G N Y QL +G
Sbjct: 136 IKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLG 177
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q + P + V IA G H LALT G +FSWG GQLG ++G + P
Sbjct: 128 QTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKV-VTP 186
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+++L+G+ + I+ GG HS A ++ G ++ WG N GQ+G+ DLV S
Sbjct: 187 TLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLN---DLV---------S 234
Query: 135 EDFDSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
F Q N+ V ++CG + L + ++ CG + QL G +++
Sbjct: 235 RCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEI 288
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + + + IACG +H A+++ G +F WG + GQLG + + P++++
Sbjct: 186 PTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL--NDLVSRCFPQQLKT 243
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L LGV IS G SA TQ+G ++ G GQ+G + ++ P + F+
Sbjct: 244 LRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEIL--PRMV-----FEL 296
Query: 140 QNIKVVDVACGSRHTLAL 157
K+ +ACG RHTLA
Sbjct: 297 MGSKITQIACGRRHTLAF 314
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V+ WGN G+LG + + PRE+ V Q + G H+ T+DG L++ G
Sbjct: 3 VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62
Query: 110 NNGGQVGVEGKLDLVVHDPH--PMSWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGC 166
N+ GQ+G HD P + S +N V V+CG+ H+LAL + ++
Sbjct: 63 NDHGQLG---------HDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSW 113
Query: 167 GWNEYNQL 174
G N QL
Sbjct: 114 GSNSIGQL 121
>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
Length = 897
Score = 97.8 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 62/162 (38%), Positives = 86/162 (53%), Gaps = 9/162 (5%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
L Q + P ++ V +ACG H LA+ +G VFSWG+ GQLG S+ + ++
Sbjct: 124 LKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDSNVS--SV 181
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
EP++I LSG +VQI+AGG HS A T G L WG N+ GQ+G+ G D V+ P +S
Sbjct: 182 EPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGL-GTNDGVL-SPTCVS 239
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
SQ+I ACG HT L + ++ G QL
Sbjct: 240 ---SLRSQHIAY--AACGEDHTAVLTKEGGVFTFGAGSSGQL 276
Score = 76.6 bits (187), Expect = 8e-12, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H+ +H + L I+CG +H + L Q+G ++S G+ GQ G + N I
Sbjct: 27 HVDLTTNHTIKL----ISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRN----NKRFARI 78
Query: 78 RALSGLGVVQISAGGW-HSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSE 135
A + + +S+ G H+ A +YAWG N+ GQ+GV + L P +
Sbjct: 79 DAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLS 138
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
F VV VACG H+LA+ +D +++ G N Y QL + VS V
Sbjct: 139 KF-----AVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDSNVSSV 181
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
ACG DH LT+EG VF++G GS GQLG+ S + P+ + L G+ V QI+ G ++
Sbjct: 250 ACGEDHTAVLTKEGGVFTFGAGSSGQLGHNS--LSHHCSPQMVVDLMGIVVTQITCGRFY 307
Query: 95 S 95
+
Sbjct: 308 A 308
>gi|195502413|ref|XP_002098213.1| GE10252 [Drosophila yakuba]
gi|194184314|gb|EDW97925.1| GE10252 [Drosophila yakuba]
Length = 374
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 17/174 (9%)
Query: 16 VFHMPSRMDHFLD--LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++ +PS + F + V + CG +H + L G VF+WGNG RGQLG +
Sbjct: 159 IYSIPSCLHQFPERQFRVKQLECGHEHAVLLNVNGDVFTWGNGLRGQLGLAELRVEET-- 216
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLVVHDP--HP 130
P+ + AL+G+ + QI+AGGWHSAA + G LY WG N+ GQ+G+ K V+ +P +P
Sbjct: 217 PQLLEALAGIKITQIAAGGWHSAAISAFGDLYTWGVNSSGQLGMRVMKAGGVLKEPTVYP 276
Query: 131 MSWSEDF----------DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +D + + + V GSRHTL + LW GW ++ QL
Sbjct: 277 LPQLQDLTECACLQGGESNDDCAPLRVFAGSRHTLLIRRCGRLWVSGWCKHGQL 330
>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
Length = 1039
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 8/181 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +D F ++ IACG H +AL + G FSWG+ S GQLG + G+ A +P+ I+
Sbjct: 79 PVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLG-SNLGSHAQDKPKIIKT 137
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ V+Q++ G +H+ T +G LYAWG N+ GQ G+ + + + P + S
Sbjct: 138 LATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSN---KETTPQALSSIL-- 192
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
I + +ACGS HT AL +++G G N + QL + S+ T L +VK C
Sbjct: 193 -GIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRC-YPTHLKTLRNVKVCH 250
Query: 200 I 200
I
Sbjct: 251 I 251
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + + IACG +H AL+Q G VF WG S GQLG ++ P ++
Sbjct: 185 PQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGL--QDRESRCYPTHLKT 242
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L + V IS G +A T DG ++ G GQ G D +V P E S
Sbjct: 243 LRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELV----PRKVMELMGS 298
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
V VACG RH L + L CG+ QL GC
Sbjct: 299 ---TVTQVACGRRHMLCRVGERIL-ACGYGARGQL--GC 331
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + ++ V I+CG D LT +G VF+ G G GQ G+ T + PR++
Sbjct: 237 PTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGH--GNTKDELVPRKVME 294
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G V Q++ G H R + L A G+ GQ+G +V P P++++ + +S
Sbjct: 295 LMGSTVTQVACGRRHMLCRVGERIL-ACGYGARGQLGCPHMAFALV--PTPVTFTPNDES 351
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 65/176 (36%), Gaps = 48/176 (27%)
Query: 50 VFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+F WGN + +L G D ++P + + QISAG +H+ + +G LY G
Sbjct: 1 MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCG 60
Query: 109 WNNGGQVG-----VEGKLDLVVHD----------------------PHPMSWSEDFDSQ- 140
N GQ+G +G ++V P SW D Q
Sbjct: 61 SNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQL 120
Query: 141 -------------------NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V+ VACGS HT+ L ++ L+ G N Y Q +G
Sbjct: 121 GSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLG 176
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG-----TDANME 73
+P ++ + VT +ACG H L E I+ + G G+RGQLG P T
Sbjct: 288 VPRKVMELMGSTVTQVACGRRHMLCRVGERIL-ACGYGARGQLGCPHMAFALVPTPVTFT 346
Query: 74 PREIRALSGL---GVVQISAGGWHS 95
P + S G V++ AGG HS
Sbjct: 347 PNDESPFSPEIFSGPVKVFAGGDHS 371
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 8/166 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + D ++ + CG HC+AL+++G +F+WG + GQLG G + + P +
Sbjct: 125 RIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGL-GKGEPSKLFPHPL 183
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
++L+G+ + QI+AGG HS A + G ++ WG N GQ+G+ K D V P + +
Sbjct: 184 KSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAV--PCHIKF---L 238
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
SQ KVV ++CG HT AL D L+ G + QL G S++
Sbjct: 239 RSQ--KVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSEL 282
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T ++CG H +A+ ++G +F+WG G GQLG ++ T + PR ++ L + Q+
Sbjct: 85 ITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRI-PRLVKRLCDHRISQVMC 143
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H A ++DG L+ WG N GQ+G+ GK + PHP+ I + + G
Sbjct: 144 GNQHCVALSRDGQLFTWGQNTSGQLGL-GKGEPSKLFPHPLK-----SLAGIPLAQITAG 197
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ AL +++G G N QL +
Sbjct: 198 GDHSFALSLSGAVFGWGKNRAGQLGL 223
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 10/149 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ CG H + L +G V++ G+ S GQLG+ +G + P + AL + +S
Sbjct: 35 LKEVGCGGQHSVFLMHDGSVYTCGSNSCGQLGHDKAG----ISPEVVGALDTQKITMVSC 90
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A + G L+AWG +GGQ+G+ G + V P + D ++ V CG
Sbjct: 91 GRGHSMAVNEQGQLFAWGAGDGGQLGL-GTTETTVRIPRLVKRLCDH-----RISQVMCG 144
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
++H +AL D L+ G N QL +G G
Sbjct: 145 NQHCVALSRDGQLFTWGQNTSGQLGLGKG 173
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 53 WGNGSRGQLGYPSSGTDAN--MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWN 110
WGN GQLG G + N EPR SG G+ ++ GG HS DG +Y G N
Sbjct: 4 WGNAKDGQLGI---GVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSN 60
Query: 111 NGGQVGVEGKLDLVVHDPHPMSWSE--DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
+ GQ+G HD +S D+Q K+ V+CG H++A+ + L+ G
Sbjct: 61 SCGQLG---------HDKAGISPEVVGALDTQ--KITMVSCGRGHSMAVNEQGQLFAWGA 109
Query: 169 NEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
+ QL +G + T + +P VK
Sbjct: 110 GDGGQLGLG------TTETTVRIPRLVKR 132
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S +P + L + IACG HCLA+T +G V SWG GQLG T+ +
Sbjct: 104 SSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGH--TEDVLV 161
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++ A G+ V ++AG H+AA T+ G LY WGW G +G+ + D +V
Sbjct: 162 PNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVP 221
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E K+ VACG RHT+A+ + +L+ GW++Y QL G
Sbjct: 222 GE-------KMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHG 258
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 10/161 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPRE 76
H+P + D ++ I CG DH A ++ V+SWG G G+LG+ +S +D + PR
Sbjct: 55 HLPLVISALDDCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNS-SDLFI-PRA 112
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I+ L GL + QI+ G H A T DG +++WG N GQ+G+ D++V P+ ++ E
Sbjct: 113 IKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLV--PNKVAAFE- 169
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I V +A G+ HT A+ + L+G GW Y L +G
Sbjct: 170 ----GIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLG 206
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG+ H +A+ G ++++G GQLG+ + ++ P +++AL + +S G
Sbjct: 228 VACGWRHTIAVANSGNLYTFGWSKYGQLGHGD--FEDHLVPHQVQALKNKTIQAVSGGWR 285
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ A +DG LY WGWN GQVG D + P ++ N KV V CG RH
Sbjct: 286 HTVALDEDGELYGWGWNKFGQVGCGNTDDH--NSPKLIT-----GIVNEKVTRVTCGWRH 338
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
T+A+ D +++ G QL G V +
Sbjct: 339 TVAITDRGNVYSWGRGTSGQLGHGDAVDR 367
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ G H +AL +V SWG G GQLG+ + + P I AL + I+
Sbjct: 16 VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDA--EERHLPLVISALDDCEISSITC 73
Query: 91 GGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H+ AR++ +Y+WGW + G++G DL + P + + +++ +AC
Sbjct: 74 GADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFI--PRAIK-----GLKGLEIKQIAC 126
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G H LA+ D + G N+ QL +G
Sbjct: 127 GDSHCLAITGDGEVHSWGRNQNGQLGLG 154
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + + ++ G+ H +AL ++G ++ WG GQ+G TD + P+ I
Sbjct: 265 VPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVG--CGNTDDHNSPKLIT 322
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
+ V +++ G H+ A T G +Y+WG GQ+G +D V
Sbjct: 323 GIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCV 369
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + ++ VT + CG+ H +A+T G V+SWG G+ GQLG+ + D + P+ I
Sbjct: 318 PKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDA-VDRCV-PKRIEL 375
Query: 80 LSGLGVV 86
LS G+
Sbjct: 376 LSADGLA 382
>gi|57997475|emb|CAI46056.1| hypothetical protein [Homo sapiens]
Length = 900
Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 13/151 (8%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGL 83
D+ + ++CG H LAL+++ VFSWG S GQLG +PS + P+ +R+L G+
Sbjct: 5 DIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS-----PQRVRSLEGI 59
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
+ Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V P+S +N+
Sbjct: 60 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSNKPLSVGA---LKNLG 115
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
VV ++CG HT L D ++ G N QL
Sbjct: 116 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 146
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 50 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 107
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL LGVV IS G H+A TQDG ++ +G N GQ+G + P P E
Sbjct: 108 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG---------YSPTP----EK 154
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 155 RGPQLVERIDGLVSQIDCGSYHTLA 179
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ + ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 3 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASPQRVRSL 56
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 57 EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL 93
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+IK++ V+CG H+LAL D+ ++ G N + QL +G
Sbjct: 5 DIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG 41
>gi|194911428|ref|XP_001982348.1| GG11092 [Drosophila erecta]
gi|190656986|gb|EDV54218.1| GG11092 [Drosophila erecta]
Length = 374
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 17/174 (9%)
Query: 16 VFHMPSRMDHFLD--LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++ +PS + F + V + CG +H + L G VF+WGNG RGQLG +
Sbjct: 159 IYSIPSYLQQFSERQFRVKQLQCGHEHAVLLNANGDVFTWGNGLRGQLGLAVLRVEET-- 216
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLVVHDP--HP 130
P+ + AL+G+ + QI+AGGWH+AA + G LY WG N+ GQ+G+ K ++ +P +P
Sbjct: 217 PQLLEALAGIKITQIAAGGWHTAAISAFGDLYTWGLNSSGQLGMRVMKPGGLLKEPTVYP 276
Query: 131 MSWSEDF----------DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +D + + + V GSRHTL + LW GW ++ QL
Sbjct: 277 LPQLQDLPECSCSQGGETNDDCAPLRVFAGSRHTLLIRRCGRLWVSGWCKHGQL 330
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 12/177 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + ++T I+CG H LALT G VFSWG+ + GQLG+ + PR I+A
Sbjct: 80 PQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAE-NGRQPTPRMIKA 138
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+ VVQI++G +H A T +G LYAWG N+ GQ+G+ + V P P
Sbjct: 139 IGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKV---PMPTLIQ---SL 192
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG-----CGVSQVSVMTRLSV 191
+ + +ACG H+ A+ +++G G N + QL + C +Q+ + L V
Sbjct: 193 AGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGV 249
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +MD V + CG H L LT+EG +++ GN GQLG+ T N P+ +
Sbjct: 26 VPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGH-DLDTLPNKRPQRLT 84
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+L + IS G HS A T G +++WG N GQ+G + + P P
Sbjct: 85 SLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENG---RQPTPRMIKAIGA 141
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
VV +A G H LAL ++ L+ G N Y QL +G +V + T
Sbjct: 142 KH---VVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPT 187
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S+ MP+ + + + IACG +H A+++ G +F WG + GQLG + ++
Sbjct: 180 SEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL--NDLNSRCY 237
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++R L LGV IS G S T +G ++ G GQ+G + +V P +
Sbjct: 238 PTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIV--PRKV-- 293
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMG 177
F+ K+ +ACG RHTLA ++G G QL +G
Sbjct: 294 ---FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIG 335
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WGN + G+LG + M PR++ VV++ G H+ T++G +YA G
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N+ GQ+G DL D P + S +N + ++CG+ H+LAL + ++ G
Sbjct: 63 NDHGQLG----HDL---DTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS 115
Query: 169 NEYNQL 174
N QL
Sbjct: 116 NAVGQL 121
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 96.7 bits (239), Expect = 7e-18, Method: Composition-based stats.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T I+CG +H LA + G +F WG+ S GQLG+ +GT + P+ I++L+ +VQIS
Sbjct: 86 ITKISCGGNHTLAFNEWGQLFGWGSDSHGQLGF--NGTTQPL-PKIIKSLATFHIVQISC 142
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A T +G LY+WG N GQ+G+ + + ++ P I + +ACG
Sbjct: 143 GKNHSLALTNNGELYSWGGNYDGQLGLGMRSE---YEKQPTLIKSLL---GIPIAFIACG 196
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
S H+ AL +++G G N Y QL +
Sbjct: 197 SNHSFALSKSGAIYGWGKNTYGQLGL 222
Score = 83.6 bits (205), Expect = 6e-14, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 14/168 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + + I+CG +H LALT G ++SWG GQLG ++ +P I+
Sbjct: 125 LPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGL-GMRSEYEKQPTLIK 183
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSE 135
+L G+ + I+ G HS A ++ G +Y WG N GQ+G+ E KL HP
Sbjct: 184 SLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKL-------HPTQLKT 236
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++I+V +ACG + L D ++ CG Y QL G +++
Sbjct: 237 ---LRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEI 281
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V+ + G +H + LT+ G VFS GN QLG+ T +P ++ L + +IS
Sbjct: 36 VSQVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKKQRT----KPEKVEGLDFYRITKISC 91
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A + G L+ WG ++ GQ+G G P P +V ++CG
Sbjct: 92 GGNHTLAFNEWGQLFGWGSDSHGQLGFNG-----TTQPLPKIIKS---LATFHIVQISCG 143
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
H+LAL ++ L+ G N QL +G
Sbjct: 144 KNHSLALTNNGELYSWGGNYDGQLGLG 170
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L M S+ P+ + L + + IACG +H AL++ G ++ WG + GQLG + +
Sbjct: 169 LGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGL--NDEE 226
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ P +++ L + V I+ G SA + DG ++ G GQ+G + ++
Sbjct: 227 NKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEIL---- 282
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLAL 157
P E S V V+CG RHTLAL
Sbjct: 283 PRKIMELMGS---TVTQVSCGKRHTLAL 307
>gi|126631716|gb|AAI33847.1| Wu:fc44f06 protein [Danio rerio]
Length = 389
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 101/202 (50%), Gaps = 29/202 (14%)
Query: 1 MCDHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQ 60
+ + A+ PL V H P H L L + G +H L LT +G ++SWG+GS GQ
Sbjct: 139 LSEQTAALPLVSGGFVQHKPPFF-HPLKLCAVSLVLGSEHALLLTADGTLYSWGSGSHGQ 197
Query: 61 LGYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-- 117
LG+ G ++E P+ + AL G+ + ++AG WHSAA + G LY WGWN GQ+G+
Sbjct: 198 LGH---GALTSLEDPQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPS 254
Query: 118 ------EGKLDLVVHDPHPMSWSED---------------FDSQNI-KVVDVACGSRHTL 155
+ + + +D P++ E D N+ ++ ++CGSRHT
Sbjct: 255 RGLEEEKRRGNGSGNDDQPINTDEKSQTDVFISIQAFPALVDIANMSEISRISCGSRHTA 314
Query: 156 ALCDDNSLWGCGWNEYNQLSMG 177
A+ L+ GW +Y QL G
Sbjct: 315 AVTSAGDLYTWGWGQYGQLGHG 336
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 38/167 (22%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG------------ 67
P ++ + + +A G H A++ G ++ WG GQLG PS G
Sbjct: 209 PQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPSRGLEEEKRRGNGSG 268
Query: 68 -------------TDANMEPREIRALSGLG----VVQISAGGWHSAARTQDGFLYAWGWN 110
TD + + AL + + +IS G H+AA T G LY WGW
Sbjct: 269 NDDQPINTDEKSQTDVFISIQAFPALVDIANMSEISRISCGSRHTAAVTSAGDLYTWGWG 328
Query: 111 NGGQV--GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTL 155
GQ+ G E D +P P+ + F S ++ V DV CGS +T
Sbjct: 329 QYGQLGHGTEHSTD----EPTPVDY---FSSHSLSVKDVVCGSWNTF 368
>gi|328770114|gb|EGF80156.1| hypothetical protein BATDEDRAFT_88921 [Batrachochytrium
dendrobatidis JAM81]
Length = 321
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 20/195 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGS----RGQLGYPSSGTDAN-MEPREIRALSGLGV 85
+ D+ G HC+ALT+EG V++W GS GQLGY S A+ + + + AL G+ +
Sbjct: 118 LIDLCAGAVHCVALTEEGEVWTWRMGSATALHGQLGYIDSTVLADGFQAQIVEALQGMRM 177
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDFDSQNI 142
ISAG H+ ++DG +Y++G N Q+G+ GK P P+ + +S NI
Sbjct: 178 ASISAGRQHTMVVSKDGTIYSFGSNRYSQLGIASSHGK-------PEPIDLDLESNS-NI 229
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVK 202
K ++ACG H++A D L+G GWN YNQL + + M +L +P + C IV
Sbjct: 230 K-SEIACGFHHSIA-TDGTRLYGAGWNSYNQLGRMKELGCIHEMRQLDIPLPAQ-CSIVG 286
Query: 203 LFAEHWNSARL-SVP 216
++A W++ L +VP
Sbjct: 287 VYAGGWSTFILATVP 301
>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
Length = 1378
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 7/172 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ F L V ++CG +H LA+ +G VF+WG GS GQLG + + P++I+A
Sbjct: 88 PEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKERSFTPQKIKA 146
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G+ ++Q+S G +HS A ++DG +++WG N+ GQ+G+ ++ P S
Sbjct: 147 LAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEV------PSQTSPQRVRSL 200
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
+ I + VA G H+ AL + +G G N QL++ + V LSV
Sbjct: 201 EGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSV 252
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + + ++CG+ H LAL+++G VFSWG S GQLG + P+ +R+
Sbjct: 141 PQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGL-GKEVPSQTSPQRVRS 199
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G+ + Q++AGG HS A + G + WG N+ GQ+ + G V P+S
Sbjct: 200 LEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGT-KAPVQRYKPLSVGA---L 255
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + VV ++CGS HT L + +++ G N QL
Sbjct: 256 KTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQL 290
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SGT A ++ P
Sbjct: 194 PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLAL--SGTKAPVQRYKPLS 251
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL LGVV IS G H+A TQ+G +Y +G N+ GQ+G + P + +
Sbjct: 252 VGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLGHSAE----QRGPQCVERIDG 307
Query: 137 FDSQNIKVVDVACGSRHTLA 156
SQ + CGS HTLA
Sbjct: 308 LVSQ------IDCGSYHTLA 321
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 68/131 (51%), Gaps = 16/131 (12%)
Query: 48 GIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGF 103
G +F+WG S GQLG +PSS T P+ + L+G+ +VQISAG HS A + G
Sbjct: 913 GELFAWGQNSHGQLGLGRIFPSSPT-----PQIVEHLAGVPLVQISAGEAHSMALSMTGN 967
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+Y+WG N+ GQ+G+ S DSQ KV +ACG HT L D +
Sbjct: 968 VYSWGKNDFGQLGLGH-----TESKDSPSLLRALDSQ--KVDFLACGGSHTALLTQDGLV 1020
Query: 164 WGCGWNEYNQL 174
+ G +Y QL
Sbjct: 1021 FTFGAGKYGQL 1031
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G V+SWG GQLG T++ P +RA
Sbjct: 938 PQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWGKNDFGQLGL--GHTESKDSPSLLRA 995
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG H+A TQDG ++ +G GQ+G D + P +E +
Sbjct: 996 LDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQLGHSSTRD----ELRPCLVTELLGN 1051
Query: 140 QNIKVVDVACGSRHTLALCDD 160
+V +ACG HTLA +
Sbjct: 1052 ---RVTQIACGRWHTLAYVSE 1069
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS + V +ACG H LTQ+G+VF++G G GQLG+ S T + P +
Sbjct: 990 PSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQLGH--SSTRDELRPCLVTE 1047
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVG 116
L G V QI+ G WH+ A + G ++A+G GQ+G
Sbjct: 1048 LLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLG 1085
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P +I+A L V +S G HS A G ++AWG + GQ+G+ G+ P +
Sbjct: 87 KPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKERSFTPQKIK 145
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
IK++ V+CG H+LAL +D ++ G N + QL +G V + R+
Sbjct: 146 -----ALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSL 200
Query: 193 EHVKNCPIVKLFAEHWNSARLSV 215
E + P+ ++ A +S LS+
Sbjct: 201 EGI---PLAQVAAGGAHSFALSL 220
>gi|89130650|gb|AAI14321.1| Wu:fc44f06 protein [Danio rerio]
Length = 388
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 29/200 (14%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
+H A+ PL V H P H L L + G +H L LT +G ++SWG+GS GQLG
Sbjct: 140 EHTAALPLVSGGFVQHKPPFF-HPLKLCAVSLVLGSEHALLLTADGTLYSWGSGSHGQLG 198
Query: 63 YPSSGTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---- 117
+ G ++E P+ + AL G+ + ++AG WHSAA + G LY WGWN GQ+G+
Sbjct: 199 H---GVLTSLEDPQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPSRG 255
Query: 118 ----EGKLDLVVHDPHPM-----SWSEDF----------DSQNI-KVVDVACGSRHTLAL 157
+ + + +D P+ S ++ F D N+ ++ ++CGSRHT A+
Sbjct: 256 LEEEKRRGNGSGNDDQPINTDGKSRTDVFISIQAFPALVDIANMSEISRISCGSRHTAAV 315
Query: 158 CDDNSLWGCGWNEYNQLSMG 177
L+ GW +Y QL G
Sbjct: 316 TSAGDLYTWGWGQYGQLGHG 335
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 38/167 (22%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG------------ 67
P ++ + + +A G H A++ G ++ WG GQLG PS G
Sbjct: 208 PQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPSRGLEEEKRRGNGSG 267
Query: 68 -------------TDANMEPREIRALSGLG----VVQISAGGWHSAARTQDGFLYAWGWN 110
TD + + AL + + +IS G H+AA T G LY WGW
Sbjct: 268 NDDQPINTDGKSRTDVFISIQAFPALVDIANMSEISRISCGSRHTAAVTSAGDLYTWGWG 327
Query: 111 NGGQV--GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTL 155
GQ+ G E D +P P+ + F S ++ V DV CGS +T
Sbjct: 328 QYGQLGHGTEHSTD----EPTPVDY---FSSHSLSVKDVVCGSWNTF 367
>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 316
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 10/161 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P + L + I+CG HCLA+T E V SWG G+LG + T + P++
Sbjct: 142 LFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGT--TKDSHVPQK 199
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I A G+ + ++AG HS A T+DG LY WGW G +G+ D ++ E
Sbjct: 200 ILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLI--------PEK 251
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ K+V V+CG RHT+++ L+ GW++Y QL G
Sbjct: 252 VNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHG 292
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANME-PRE 76
+P+++ F + + CG D+ +A ++ G V+SWG G G+LG+ G +++ P
Sbjct: 91 LPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGH---GDPSDLFIPHP 147
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
IRAL GL + QIS G H A T + + +WG N G++G+ D H P +
Sbjct: 148 IRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKD--SHVPQKI----- 200
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ I++ VA G+ H++A+ +D L+G GW Y L +G
Sbjct: 201 LAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG 241
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGF-LYAW 107
+V SWG G GQLG+ TD + P ++ A G +V ++ G ++ AR++ G +Y+W
Sbjct: 69 VVCSWGRGEDGQLGH--GDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSW 126
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
GW + G++G DL + PHP+ Q +++ ++CG H LA+ +N + G
Sbjct: 127 GWGDFGRLGHGDPSDLFI--PHPIR-----ALQGLRIKQISCGDCHCLAVTMENKVLSWG 179
Query: 168 WNEYNQLSMG 177
N+ +L +G
Sbjct: 180 RNQNGELGLG 189
>gi|326680004|ref|XP_003201430.1| PREDICTED: RCC1 domain-containing protein 1-like [Danio rerio]
Length = 409
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 29/200 (14%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
+H A+ PL V H P H L L + G +H L LT +G ++SWG+GS GQLG
Sbjct: 161 EHTAALPLVSGGFVQHKPPFF-HPLKLCAVSLVLGSEHALLLTADGTLYSWGSGSHGQLG 219
Query: 63 YPSSGTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---- 117
+ G ++E P+ + AL G+ + ++AG WHSAA + G LY WGWN GQ+G+
Sbjct: 220 H---GVLTSLEDPQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPSRG 276
Query: 118 ----EGKLDLVVHDPHPM-----SWSEDF----------DSQNI-KVVDVACGSRHTLAL 157
+ + + +D P+ S ++ F D N+ ++ ++CGSRHT A+
Sbjct: 277 LEEEKRRGNGSGNDDQPINTDGKSRTDVFISIQAFPALVDIANMSEISRISCGSRHTAAV 336
Query: 158 CDDNSLWGCGWNEYNQLSMG 177
L+ GW +Y QL G
Sbjct: 337 TSAGDLYTWGWGQYGQLGHG 356
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 38/167 (22%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG------------ 67
P ++ + + +A G H A++ G ++ WG GQLG PS G
Sbjct: 229 PQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPSRGLEEEKRRGNGSG 288
Query: 68 -------------TDANMEPREIRALSGLG----VVQISAGGWHSAARTQDGFLYAWGWN 110
TD + + AL + + +IS G H+AA T G LY WGW
Sbjct: 289 NDDQPINTDGKSRTDVFISIQAFPALVDIANMSEISRISCGSRHTAAVTSAGDLYTWGWG 348
Query: 111 NGGQV--GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTL 155
GQ+ G E D +P P+ + F S ++ V DV CGS +T
Sbjct: 349 QYGQLGHGTEHSTD----EPTPVDY---FSSHSLSVKDVVCGSWNTF 388
>gi|21355837|ref|NP_650996.1| CG6678 [Drosophila melanogaster]
gi|16648386|gb|AAL25458.1| LD39062p [Drosophila melanogaster]
gi|23171938|gb|AAF55937.2| CG6678 [Drosophila melanogaster]
gi|220947324|gb|ACL86205.1| CG6678-PA [synthetic construct]
gi|220956794|gb|ACL90940.1| CG6678-PA [synthetic construct]
Length = 373
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 16 VFHMPSRMDHFLD--LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
V+ +PS + F + V + CG +H + L G VF+WGNG RGQLG +
Sbjct: 159 VYSIPSCLHQFSERQFRVKQLQCGHEHAVLLNANGDVFTWGNGLRGQLGLAELRVEET-- 216
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLVVHDP--HP 130
P+ + AL+G+ + QI+AGGWHSAA + G LY WG N GQ+G+ K V+ +P P
Sbjct: 217 PQLLEALAGIKITQIAAGGWHSAAISAFGDLYTWGLNCSGQLGLRVMKPGGVLKEPTVFP 276
Query: 131 MSWSEDF----------DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +D + + + V GSRHTL + LW GW ++ QL
Sbjct: 277 LPQLQDLPECACSQSGESNDDCAPLRVFAGSRHTLLIRRCGRLWVSGWCKHGQL 330
>gi|380018612|ref|XP_003693221.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
florea]
Length = 541
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR- 78
P+ + + + + D+ACG H LALT +G V++WG + GQ+G T PR++
Sbjct: 120 PAIITNLCNEFIVDVACGSHHSLALTNDGEVYAWGQNTSGQVGCHDITTLVQDIPRKLNF 179
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L+G V+ IS G S T +G +Y+WG N+ GQ+G+E + H + ++
Sbjct: 180 TLTGKKVICISCGDSFSVVVTNNGEVYSWGRNDVGQLGIENNNNDQFHPCRITALTK--- 236
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV--MTRLSVPEHVK 196
+ + V CGS HTLAL D+ L+ G N Y QL + + ++ T+L VPE +
Sbjct: 237 ---VVIEKVVCGSIHTLALSDEGVLYVWGANNYGQLGLTTVLLNTNIWKPTKLEVPEMRR 293
Query: 197 NCPIVKLFAEHWNSARLSVPE 217
++ + ++N +++ E
Sbjct: 294 ---VLDIATSYYNYISIALCE 311
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
H LALT+EG V+SWG +LG + G+ A + P I L +V ++ G HS A T
Sbjct: 88 HVLALTKEGKVYSWGQNCHYELG-NTFGSQA-LTPAIITNLCNEFIVDVACGSHHSLALT 145
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
DG +YAWG N GQVG LV P + +F KV+ ++CG ++ + +
Sbjct: 146 NDGEVYAWGQNTSGQVGCHDITTLVQDIPRKL----NFTLTGKKVICISCGDSFSVVVTN 201
Query: 160 DNSLWGCGWNEYNQLSM 176
+ ++ G N+ QL +
Sbjct: 202 NGEVYSWGRNDVGQLGI 218
>gi|170055304|ref|XP_001863524.1| RCC1 domain containing 1 [Culex quinquefasciatus]
gi|167875268|gb|EDS38651.1| RCC1 domain containing 1 [Culex quinquefasciatus]
Length = 346
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Query: 16 VFHMPSRMDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+F++P+R F V ++ A G +HCL LT G V+S+G G RGQLG +P
Sbjct: 147 LFYIPNRTITFPRHVRISKTAVGLEHCLLLTSNGDVYSFGGGLRGQLGN-GEIVPHQEQP 205
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ + AL+G+ +V I+AGGWHS A + G Y WGWN+ GQ+G+ V P ++
Sbjct: 206 QLVDALAGVKIVDIAAGGWHSVAVSAFGDAYCWGWNSRGQLGLPAGKGSVQSVPQ-LADI 264
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
E D + + + V CGS HT+ +C ++ G
Sbjct: 265 EGDDGEEVSLEKVYCGSGHTVGVCSKGRVYFAG 297
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+T IACG LA+T +F N + PR +R + + +
Sbjct: 127 TITMIACGDQVSLAVTSAKSLFYIPNRTI-------------TFPRHVR------ISKTA 167
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVA 148
G H T +G +Y++G GG G G ++V H P + D+ +K+VD+A
Sbjct: 168 VGLEHCLLLTSNGDVYSFG---GGLRGQLGNGEIVPHQEQP----QLVDALAGVKIVDIA 220
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H++A+ + GWN QL + G V + +L+
Sbjct: 221 AGGWHSVAVSAFGDAYCWGWNSRGQLGLPAGKGSVQSVPQLA 262
>gi|351715554|gb|EHB18473.1| RCC1 domain-containing protein 1 [Heterocephalus glaber]
Length = 370
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPR 75
P R +L + G +H L L G VFSWG G GQLG+ GT +A EPR
Sbjct: 144 LQPPLRRALAPELRARRLELGIEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAEPEPR 200
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV------EG---------- 119
+ AL GL + Q++AGGWHS ++ G +Y WGWN GQ+ + EG
Sbjct: 201 PLEALQGLPMSQLAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSLAEGKRTDTGEDEG 260
Query: 120 ------KLDLVVHDPHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGW 168
K++ P P + F + + V V+CGSRHT + L+ GW
Sbjct: 261 LNEDGSKVERAAEAPAPFIAIQPFPALLDLPLGSEAVGVSCGSRHTAVVTRTGELYTWGW 320
Query: 169 NEYNQL 174
+Y QL
Sbjct: 321 GKYGQL 326
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 37/174 (21%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS----------SGTD 69
P ++ L ++ +A G H + +++ G ++ WG GQL P+ +G D
Sbjct: 199 PRPLEALQGLPMSQLAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSLAEGKRTDTGED 258
Query: 70 ANME------------PREIRALS----------GLGVVQISAGGWHSAARTQDGFLYAW 107
+ P A+ G V +S G H+A T+ G LY W
Sbjct: 259 EGLNEDGSKVERAAEAPAPFIAIQPFPALLDLPLGSEAVGVSCGSRHTAVVTRTGELYTW 318
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDN 161
GW GQ+G + L P E F + ++V V CG +T +N
Sbjct: 319 GWGKYGQLGHKDSASLD----RPCR-VEYFVDKQLQVKTVTCGPWNTYVYAVEN 367
>gi|195453186|ref|XP_002073677.1| GK14234 [Drosophila willistoni]
gi|194169762|gb|EDW84663.1| GK14234 [Drosophila willistoni]
Length = 387
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 18/175 (10%)
Query: 16 VFHMPSRMDHFLDL--VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
V+ +PS + F + V + CG +H L L G ++SWGNG RGQLG+ G +
Sbjct: 164 VYSIPSCLYQFPERQWRVQQLICGHEHALLLNGNGDIYSWGNGLRGQLGHSVLGMEET-- 221
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLVVHDPHPMS 132
P + AL+G+ + I+AGGWHSAA + G LYAWG N+ GQ+G+ K ++ +P
Sbjct: 222 PLLVEALAGIKITFITAGGWHSAAISAFGDLYAWGHNSHGQMGMRVMKPGGLLKEPTVYP 281
Query: 133 WSEDFDSQNIKV-------------VDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + N + + V GSRHTL L LWG GW+ + QL
Sbjct: 282 LPQLVELPNTECCCQSESHEDSCAPLRVYAGSRHTLLLRSCGKLWGSGWSYHGQL 336
>gi|195572732|ref|XP_002104349.1| GD20908 [Drosophila simulans]
gi|194200276|gb|EDX13852.1| GD20908 [Drosophila simulans]
Length = 374
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 17/174 (9%)
Query: 16 VFHMPSRMDHFLD--LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
V+ +PS + F + V + CG +H + L G VF+WGNG RGQLG +
Sbjct: 159 VYSIPSCLHQFSERQFRVKQVQCGHEHAVLLNANGDVFTWGNGLRGQLGLAVLRVEET-- 216
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLVVHDP--HP 130
P+ + AL+G+ + +I+AGGWHSAA + G LY WG N GQ+G+ K V+ +P +P
Sbjct: 217 PQLLEALAGIKITRIAAGGWHSAAISAFGDLYTWGLNCSGQLGMRVMKPGGVLKEPTVYP 276
Query: 131 MSWSEDF----------DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +D + + + + V GSRHTL + LW GW ++ QL
Sbjct: 277 LPQLQDLPECDCSQGGESNDDCEPLRVFAGSRHTLLIRRCGRLWVSGWCKHGQL 330
>gi|156378180|ref|XP_001631022.1| predicted protein [Nematostella vectensis]
gi|156218054|gb|EDO38959.1| predicted protein [Nematostella vectensis]
Length = 133
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 70/121 (57%), Gaps = 6/121 (4%)
Query: 57 SRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
SRGQLG+ TDA EPR + L G+ + I+AGGWHSA + G +Y WGWN GQVG
Sbjct: 11 SRGQLGH--GLTDAETEPRRLEVLVGINIKCIAAGGWHSAVISDAGDVYGWGWNESGQVG 68
Query: 117 VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ + + DP P+ + S VV VACG+RHT A+ DD +W GW Y QL
Sbjct: 69 IGDGIQCQM-DPTPICFPA---SDEPNVVSVACGARHTAAVSDDAQVWTWGWGWYGQLGH 124
Query: 177 G 177
G
Sbjct: 125 G 125
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
L+ P R++ + + + IA G H ++ G V+ WG GQ+G G M
Sbjct: 19 LTDAETEPRRLEVLVGINIKCIAAGGWHSAVISDAGDVYGWGWNESGQVGI-GDGIQCQM 77
Query: 73 EPREI--RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+P I A VV ++ G H+AA + D ++ WGW GQ+G
Sbjct: 78 DPTPICFPASDEPNVVSVACGARHTAAVSDDAQVWTWGWGWYGQLG 123
>gi|195330875|ref|XP_002032128.1| GM26385 [Drosophila sechellia]
gi|194121071|gb|EDW43114.1| GM26385 [Drosophila sechellia]
Length = 374
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 19/199 (9%)
Query: 16 VFHMPSRMDHFLD--LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
V+ +PS + F + V + CG +H + L G VF+WGNG RGQLG +
Sbjct: 159 VYSIPSCLHQFSERQFRVKQLQCGHEHAVLLNANGDVFTWGNGLRGQLGLAVLRVEET-- 216
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLVVHDP--HP 130
P+ + AL+G+ + +I+AGGWHSAA + G LY WG N GQ+G+ K V+ +P +P
Sbjct: 217 PQLLEALAGIKITRIAAGGWHSAAISAFGDLYTWGLNCSGQLGMRVMKPGGVLKEPTVYP 276
Query: 131 MSWSEDF----------DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ +D + + + + V GSRHTL + LW GW ++ QL G +
Sbjct: 277 LPQLQDLPECDCSQGGESNNDCEPLRVFAGSRHTLLIRRCGRLWVSGWCKHGQL--GRQL 334
Query: 181 SQVSVMTRLSVPEHVKNCP 199
+S + E +K P
Sbjct: 335 QNLSYVDAFQALEGIKMNP 353
>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 371
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 10/161 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P + L + I+CG HCLA+T E V SWG G+LG + T + P++
Sbjct: 197 LFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGT--TKDSHVPQK 254
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I A G+ + ++AG HS A T+DG LY WGW G +G+ D ++ E
Sbjct: 255 ILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLI--------PEK 306
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ K+V V+CG RHT+++ L+ GW++Y QL G
Sbjct: 307 VNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHG 347
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANME-PRE 76
+P+++ F + + CG D+ +A ++ G V+SWG G G+LG+ G +++ P
Sbjct: 146 LPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGH---GDPSDLFIPHP 202
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
IRAL GL + QIS G H A T + + +WG N G++G+ D H P +
Sbjct: 203 IRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKD--SHVPQKI----- 255
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ I++ VA G+ H++A+ +D L+G GW Y L +G
Sbjct: 256 LAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG 296
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGF-LYAW 107
+V SWG G GQLG+ TD + P ++ A G +V ++ G ++ AR++ G +Y+W
Sbjct: 124 VVCSWGRGEDGQLGH--GDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSW 181
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
GW + G++G DL + PHP+ Q +++ ++CG H LA+ +N + G
Sbjct: 182 GWGDFGRLGHGDPSDLFI--PHPIR-----ALQGLRIKQISCGDCHCLAVTMENKVLSWG 234
Query: 168 WNEYNQLSMG 177
N+ +L +G
Sbjct: 235 RNQNGELGLG 244
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 10/161 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P + L + I+CG HCLA+T E V SWG G+LG + T + P++
Sbjct: 105 LFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGT--TKDSHVPQK 162
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I A G+ + ++AG HS A T+DG LY WGW G +G+ D ++ E
Sbjct: 163 ILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLI--------PEK 214
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ K+V V+CG RHT+++ L+ GW++Y QL G
Sbjct: 215 VNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHG 255
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANM-EPRE 76
+P+++ F + + CG D+ +A ++ G V+SWG G G+LG+ G +++ P
Sbjct: 54 LPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGH---GDPSDLFIPHP 110
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
IRAL GL + QIS G H A T + + +WG N G++G+ D H P +
Sbjct: 111 IRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKD--SHVPQKI----- 163
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ I++ VA G+ H++A+ +D L+G GW Y L +G
Sbjct: 164 LAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG 204
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL +V SWG G GQLG+ TD + P ++ A G +V ++ G
Sbjct: 17 ISAGASHTVALLTGNVVCSWGRGEDGQLGHGD--TDDRLLPTKLSAFDGQDIVSVTCGAD 74
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
++ AR++ G +Y+WGW + G++G DL + PHP+ Q +++ ++CG
Sbjct: 75 YTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFI--PHPIR-----ALQGLRIKQISCGDC 127
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LA+ +N + G N+ +L +G
Sbjct: 128 HCLAVTMENKVLSWGRNQNGELGLG 152
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S +P + L V IACG HCLA+T +G V WG GQLG T+ +
Sbjct: 104 SSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGH--TEDVLT 161
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++ A G+ V ++AG H+ A T++G LY WGW G +G+ + D +V D
Sbjct: 162 PHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVA 221
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E VACG RHT+ + + +++ GW++Y QL G
Sbjct: 222 GELMKM-------VACGWRHTICVAESGNMYTFGWSKYGQLGHG 258
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 10/161 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQE-GIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
H P+ + D ++ + CG DH AL+ V+SWG G G+LG+ +S +D + P+
Sbjct: 55 HFPTIVSALDDCEISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNS-SDLFI-PQP 112
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I+AL GL V QI+ G H A T DG + WG N GQ+G+ D++ PH ++ E
Sbjct: 113 IKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLT--PHKLTAFE- 169
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V +A G+ HT A+ ++ L+G GW Y L +G
Sbjct: 170 ----GVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLG 206
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 10/173 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ ++ +ACG+ H + + + G ++++G GQLG+ ++ P +++
Sbjct: 213 VPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFAD--HLIPHQVQ 270
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL + I+ G H+ A DG LY WGWN GQVG D P + +D
Sbjct: 271 ALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQ--SSPQLVKGLQD-- 326
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
Q + VV CG RHTLA+ D +++ G QL G V + S R+ +
Sbjct: 327 -QVVTVVQ--CGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDR-STPKRIEI 375
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ G H +AL +V SWG G GQLG+ + + P + AL + ++
Sbjct: 16 VLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDA--EERHFPTIVSALDDCEISSVTC 73
Query: 91 GGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H+ A + +Y+WGW + G++G DL + P P+ + ++V +AC
Sbjct: 74 GADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFI--PQPIK-----ALKGLEVKQIAC 126
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G H LA+ D + G G N+ QL +G
Sbjct: 127 GDSHCLAITTDGEVLGWGRNQNGQLGLG 154
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D VVT + CG+ H LA+T G V+SWG G+ GQLG+ + + + EI +
Sbjct: 318 PQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILS 377
Query: 80 LSGLGVVQISAGG 92
G QI + G
Sbjct: 378 SDGFACEQIESSG 390
>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
africana]
Length = 1018
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 89/174 (51%), Gaps = 8/174 (4%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
L G K L+ P ++ + + ++CG H LAL+Q+G VFSWGN S GQLG
Sbjct: 104 QLGIGEFKELN---FTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGL 160
Query: 64 PSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
+ P+ +++L G+ + Q++AGG HS A + G + WG NN GQ+ + G ++
Sbjct: 161 GKEFL-SQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGN-NV 218
Query: 124 VVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V P S + + VV ++CGS HT L D ++ G N QL G
Sbjct: 219 PVQSYKPRSIGA---LKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHG 269
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L V ++CG +H LA+ +G VF+WG GS GQLG + N P +++A
Sbjct: 64 PGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKELNFTPMKVKA 122
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G+ ++Q+S G +HS A +QDG +++WG N+ GQ+G+ GK L P + E
Sbjct: 123 LAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGL-GKEFLSQESPQRVKSLE---- 177
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + VA G H+ AL + +G G N QL++
Sbjct: 178 -GIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAL 213
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L +G V + G+ S GQLG G P I+AL L V +S G H
Sbjct: 27 ASGERHSLLLLSDGTVHACGDNSCGQLG--RRGVPHRKRPGLIQALETLNVDLLSCGKEH 84
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + IK++ V+CG H+
Sbjct: 85 SLAVCHKGRVFAWGAGSEGQLGI-GEFKELNFTPMKVK-----ALAGIKIIQVSCGHYHS 138
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D ++ G N + QL +G
Sbjct: 139 LALSQDGQVFSWGNNSHGQLGLG 161
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P + +L V I+CG +H LTQ+G VF++G+ S GQLG+ T P+ +
Sbjct: 223 YKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGH--GPTAEKRGPQLV 280
Query: 78 RALSGLGVVQISAGGWHS 95
+ GL V QI G +H+
Sbjct: 281 EGIDGL-VSQIDCGSYHT 297
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 21/129 (16%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F W GSRG+ ++G G + Q ++G HS DG ++A G
Sbjct: 1 MYFCWDAGSRGRQSREAAG--------------GAELRQAASGERHSLLLLSDGTVHACG 46
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N+ GQ+G G V H P + ++ N+ + ++CG H+LA+C ++ G
Sbjct: 47 DNSCGQLGRRG----VPHRKRP-GLIQALETLNVDL--LSCGKEHSLAVCHKGRVFAWGA 99
Query: 169 NEYNQLSMG 177
QL +G
Sbjct: 100 GSEGQLGIG 108
>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Nomascus leucogenys]
Length = 984
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
L ++ P ++ + + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 LKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ VV ++CG+ HT L D ++ G N QL
Sbjct: 226 KPLSVGA---LKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQL 268
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + L V ++CG +H LA+ +G VF+WG GS GQLG + + P++I
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GELKEISFTPKKI 122
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G+ ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASPQRVR 176
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL 215
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG G P I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAPRGELPEPIQALETLNVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+L + P ++ IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GELKEISFTPKKIT-----TLNGIKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL LGVV IS G H+A TQDG ++ +G N GQ+G + P P E
Sbjct: 230 VGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++++D V CGS HTLA
Sbjct: 277 RGPQLVEIIDGLVSQVDCGSYHTLA 301
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 29/177 (16%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F WG SR ++ R G ++Q ++G HS + + + G
Sbjct: 1 MYFCWGADSR------------ELQRRRTEGSPGAELLQAASGERHSLLLLTNHRVLSCG 48
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N+ GQ+G G + P P+ E + V V+CG H+LA+C ++ G
Sbjct: 49 DNSRGQLGRRGAPRGEL--PEPIQALE-----TLNVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 169 NEYNQLSMGCGVSQVSVM-TRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSI 224
QL +G + ++S +++ +K I+++ H++S LS KDS +
Sbjct: 102 GSEGQLGIG-ELKEISFTPKKITTLNGIK---IIQVSCGHYHSLALS-----KDSQV 149
>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
Length = 1028
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
++ P ++ D+ + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ VV ++CG HT L D ++ G N QL
Sbjct: 226 KPLSVGA---LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + L+V ++CG +H LA+ +G VF+WG GS GQLG + + P++I
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ + ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASPQRVR 176
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ I + VA G H+ AL + +G G N QL++
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS 216
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG G P I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + D IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLND-----IKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL LGVV IS G H+A TQDG ++ +G N GQ+G + P P E
Sbjct: 230 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 277 RGPQLVERIDGLVSQIDCGSYHTLA 301
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 37/181 (20%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F WG SR ++ R G ++Q ++G HS + + + G
Sbjct: 1 MYFCWGADSR------------ELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCG 48
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VACGSRHTLALCDDNSLWGCG 167
N+ GQ+G G + P P+ E +VD V+CG H+LA+C ++ G
Sbjct: 49 DNSRGQLGRRGAQRGEL--PEPIQALETL------IVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 168 WNEYNQLSMG----CGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSS 223
QL +G + +MT + + I+++ H++S LS KDS
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKIMT-------LNDIKIIQVSCGHYHSLALS-----KDSQ 148
Query: 224 I 224
+
Sbjct: 149 V 149
>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
Full=HECT domain and RCC1-like domain-containing protein
6
gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
Length = 1022
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
++ P ++ D+ + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ VV ++CG HT L D ++ G N QL
Sbjct: 226 KPLSVGA---LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + L+V ++CG +H LA+ +G VF+WG GS GQLG + + P++I
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ + ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASPQRVR 176
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL 215
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG G P I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + D IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLND-----IKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL LGVV IS G H+A TQDG ++ +G N GQ+G + P P E
Sbjct: 230 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 277 RGPQLVERIDGLVSQIDCGSYHTLA 301
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 37/181 (20%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F WG SR ++ R G ++Q ++G HS + + + G
Sbjct: 1 MYFCWGADSR------------ELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCG 48
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VACGSRHTLALCDDNSLWGCG 167
N+ GQ+G G + P P+ E +VD V+CG H+LA+C ++ G
Sbjct: 49 DNSRGQLGRRGAQRGEL--PEPIQALETL------IVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 168 WNEYNQLSMG----CGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSS 223
QL +G + +MT + + I+++ H++S LS KDS
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKIMT-------LNDIKIIQVSCGHYHSLALS-----KDSQ 148
Query: 224 I 224
+
Sbjct: 149 V 149
>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Nomascus leucogenys]
Length = 1020
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
L ++ P ++ + + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 LKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ VV ++CG+ HT L D ++ G N QL
Sbjct: 226 KPLSVGA---LKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQL 268
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + L V ++CG +H LA+ +G VF+WG GS GQLG + + P++I
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GELKEISFTPKKI 122
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G+ ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASPQRVR 176
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL 215
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG G P I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAPRGELPEPIQALETLNVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+L + P ++ IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GELKEISFTPKKIT-----TLNGIKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL LGVV IS G H+A TQDG ++ +G N GQ+G + P P E
Sbjct: 230 VGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++++D V CGS HTLA
Sbjct: 277 RGPQLVEIIDGLVSQVDCGSYHTLA 301
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 29/177 (16%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F WG SR ++ R G ++Q ++G HS + + + G
Sbjct: 1 MYFCWGADSR------------ELQRRRTEGSPGAELLQAASGERHSLLLLTNHRVLSCG 48
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N+ GQ+G G + P P+ E + V V+CG H+LA+C ++ G
Sbjct: 49 DNSRGQLGRRGAPRGEL--PEPIQALE-----TLNVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 169 NEYNQLSMGCGVSQVSVM-TRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSI 224
QL +G + ++S +++ +K I+++ H++S LS KDS +
Sbjct: 102 GSEGQLGIG-ELKEISFTPKKITTLNGIK---IIQVSCGHYHSLALS-----KDSQV 149
>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
Length = 986
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
++ P ++ D+ + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ VV ++CG HT L D ++ G N QL
Sbjct: 226 KPLSVGA---LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q +P + L+V ++CG +H LA+ +G VF+WG GS GQLG + +
Sbjct: 60 AQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFT 118
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I L+ + ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 119 PKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASP 172
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 173 QRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL 215
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG G P I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + D IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLND-----IKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL LGVV IS G H+A TQDG ++ +G N GQ+G + P P E
Sbjct: 230 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 277 RGPQLVERIDGLVSQIDCGSYHTLA 301
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 37/181 (20%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F WG SR ++ R G ++Q ++G HS + + + G
Sbjct: 1 MYFCWGADSR------------ELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCG 48
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VACGSRHTLALCDDNSLWGCG 167
N+ GQ+G G + P P+ E +VD V+CG H+LA+C ++ G
Sbjct: 49 DNSRGQLGRRGAQRGEL--PEPIQALETL------IVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 168 WNEYNQLSMG----CGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSS 223
QL +G + +MT + + I+++ H++S LS KDS
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKIMT-------LNDIKIIQVSCGHYHSLALS-----KDSQ 148
Query: 224 I 224
+
Sbjct: 149 V 149
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/156 (35%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGVVQ 87
VV IACG H ALT G ++SWG+ S GQLG GTD E P+ I A G+ +
Sbjct: 165 VVVQIACGMKHAFALTNNGELYSWGSNSEGQLGL---GTDTKYEIKPKFISAFIGIPIAF 221
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
I+ GG+HS A ++ G ++ WG N GQ+G+ D + P + QN K+
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNL--PCQLQ-----TLQNAKICYA 274
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
ACG ++ L D ++ CG Y QL G +++
Sbjct: 275 ACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEI 310
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V ACG H LA+ + G +FSWG+ + GQLG +S PR ++ L VVQI
Sbjct: 111 FVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGL-NSKNFMESSPRMVKTLGTSVVVQI 169
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G H+ A T +G LY+WG N+ GQ+G+ ++ P S I + +A
Sbjct: 170 ACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTK---YEIKPKFISAFI---GIPIAFIA 223
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSM 176
CG H++A+ +++G G N + QL +
Sbjct: 224 CGGYHSIAISKSGAVFGWGKNTFGQLGL 251
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +D + IACG ++ + +TQ G ++S GN GQLG+ + P
Sbjct: 51 IPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIP---- 106
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L + + G +H+ A + G L++WG N GQ+G+ K + + P +
Sbjct: 107 GLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSK-NFMESSPRMVK-----T 160
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
VV +ACG +H AL ++ L+ G N QL +G
Sbjct: 161 LGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLG 199
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + F+ + + IACG H +A+++ G VF WG + GQLG + D N+ P +++
Sbjct: 208 PKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDT-QDRNL-PCQLQT 265
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L + + G S T DG ++ G GQ+G + ++ P E S
Sbjct: 266 LQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL----PRQVMELMGS 321
Query: 140 QNIKVVDVACGSRHTLALCDDNS---LWGCG 167
V ++CG RHTLAL WG G
Sbjct: 322 ---TVTQISCGKRHTLALVPSRGRVYAWGLG 349
Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q ++P ++ + + ACG + + LT +G VF+ G G GQLG+ S+ + +
Sbjct: 254 TQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNE--IL 311
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDL----VVHDP 128
PR++ L G V QIS G H+ A G +YAWG GQ+G + VVH P
Sbjct: 312 PRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHGP 371
Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
++ WG G++G+ G D + P + + + + Q I ACG +T+ + +
Sbjct: 28 MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQI-----ACGENYTVVITQIGEI 82
Query: 164 WGCGWNEYNQL 174
+ CG N+Y QL
Sbjct: 83 YSCGNNDYGQL 93
>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
[Cricetulus griseus]
Length = 887
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP R+ + + ++CG H LAL+++G VFSWG S+GQLG + + P+++
Sbjct: 116 MPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGL-GMQSSSQASPQKVT 174
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSEDF 137
+L G+ + Q++AGG HS A + G Y WG N+ GQ+ + G+ V + PH +
Sbjct: 175 SLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSID----- 229
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L D ++ G N QL
Sbjct: 230 ALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQL 266
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 8/181 (4%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++CG +H +A+ +G VF+WG GS GQLG + N+ P I+ L G+ ++Q+S G +
Sbjct: 78 VSCGKEHSIAVCHKGRVFAWGAGSEGQLGI-GEFKEINLMPMRIKTLGGIKIIQVSCGHY 136
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A ++DG +++WG N+ GQ+G+ G P ++ E I + VA G H
Sbjct: 137 HSLALSEDGQVFSWGKNSQGQLGL-GMQSSSQASPQKVTSLE-----GIPLAQVAAGGSH 190
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARL 213
+ AL + +G G N QL++ S V + S+ + +KN ++ + + ++A L
Sbjct: 191 SFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSI-DALKNLGVIYISCGYEHTAVL 249
Query: 214 S 214
+
Sbjct: 250 T 250
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R++ L + A G H L L V+S G+ S GQLG EP I+A
Sbjct: 12 PRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEP--IQA 69
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L L + +S G HS A G ++AWG + GQ+G+ G+ + + PM
Sbjct: 70 LGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGI-GEFKEI--NLMPMRIK---TL 123
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
IK++ V+CG H+LAL +D ++ G N QL +G
Sbjct: 124 GGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLG 161
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 13/140 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P ++ + + +A G H AL+ G + WG+ S GQL + + +P I
Sbjct: 170 PQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSID 229
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL LGV+ IS G H+A T+DG ++ +G N+ GQ+ ++P
Sbjct: 230 ALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQ---------NNPRGKRRGPQL- 279
Query: 139 SQNIK--VVDVACGSRHTLA 156
+ IK V + CGS HT+A
Sbjct: 280 VEGIKGQVSKIECGSYHTIA 299
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+PR + GL ++Q ++G HS + +Y+ G N+ GQ+G K + P P+
Sbjct: 11 QPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLG--QKREQNTEQPEPIQ 68
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
D + V+CG H++A+C ++ G QL +G ++++M P
Sbjct: 69 ALGTLD-----IDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIG-EFKEINLM-----P 117
Query: 193 EHVKN---CPIVKLFAEHWNSARLS 214
+K I+++ H++S LS
Sbjct: 118 MRIKTLGGIKIIQVSCGHYHSLALS 142
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 7/170 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L+ + I+CG H +AL ++G VFSWG GQLG S + P+ +++
Sbjct: 128 PKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIIN-QATPQLVKS 186
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G+ +VQ++AGG + A + G ++AWG NN GQ+G + P+ + D
Sbjct: 187 LKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRD--- 243
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ V ++CG HT L D ++ G + Y QL G +Q SV ++
Sbjct: 244 --LGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSG-NQTSVPQKI 290
Score = 90.1 bits (222), Expect = 7e-16, Method: Composition-based stats.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 21 SRMDHFLDL---VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
SR++ L + D++CG +H +A+ EG ++SWG+GS GQLG + N P+ I
Sbjct: 73 SRIEQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLG-TGKFSSKNFTPKRI 131
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L ++QIS G +HS A +DG +++WG N GQ+G+ + +++ P
Sbjct: 132 TGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQ---IINQATPQLVKS-- 186
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ I +V V G T AL +++ G N QL
Sbjct: 187 -LKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQL 222
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 13/175 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ G H L L ++G + S G GQLG G ++ +E +I +L +V +S
Sbjct: 36 VQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLG--RKGNNSRIE--QISSLEAQTIVDVSC 91
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A +G +Y+WG + GQ+G GK P ++ N K++ ++CG
Sbjct: 92 GTNHSVAMCDEGNIYSWGDGSEGQLGT-GKFSSKNFTPKRIT-----GLLNRKIIQISCG 145
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
+ H++AL +D ++ G N+ QL +G SQ+ + + +K P+V++ A
Sbjct: 146 NFHSVALAEDGRVFSWGQNKCGQLGLG---SQIINQATPQLVKSLKGIPLVQVTA 197
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 8 GPLKMLSQVFHM--PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
G L + SQ+ + P + + + + G AL+ G VF+WG + GQLG+ +
Sbjct: 167 GQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKN 226
Query: 66 SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
+P + +L LGV IS G H+A +DG +Y +G + GQ+G +
Sbjct: 227 DAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSG----- 281
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTL 155
+ S + + + +V VACG HTL
Sbjct: 282 ---NQTSVPQKIEEYSRQVSQVACGRYHTL 308
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ GQL + V ++S G HS +DG L + G
Sbjct: 1 MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N GQ+G +G + + ++Q I VDV+CG+ H++A+CD+ +++ G
Sbjct: 61 NPYGQLGRKG-------NNSRIEQISSLEAQTI--VDVSCGTNHSVAMCDEGNIYSWGDG 111
Query: 170 EYNQLSMG 177
QL G
Sbjct: 112 SEGQLGTG 119
Score = 42.7 bits (99), Expect = 0.14, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+Y WG N GQ+ V + VVH D+ + V V+ G +H+L L D +L
Sbjct: 1 MYCWGDNCFGQLAVLEEEKEVVHFKE-----NDYFQKKESVQKVSIGEKHSLYLLKDGTL 55
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRL 189
CG N Y QL S++ ++ L
Sbjct: 56 LSCGQNPYGQLGRKGNNSRIEQISSL 81
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S VF+ P + + + IACG HCL +T G V SWG GQLG ++ ++
Sbjct: 112 SDVFN-PQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNN--QDSLL 168
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I+A G+ V I+AG H+ A T+ G LY WGW G +G+ + D V P +S
Sbjct: 169 PQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSV--PEKVSS 226
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
E K+V VACG RH++++ +L+ GW++Y QL G G Q ++ R E
Sbjct: 227 VE-----GEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQL--GHGDFQDHLVPRKL--E 277
Query: 194 HVKNCPIVKL 203
+K+ PI ++
Sbjct: 278 ALKDVPISQI 287
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + +ACG+ H ++++ G ++++G GQLG+ ++ PR++
Sbjct: 220 VPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGH--GDFQDHLVPRKLE 277
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL + + QIS G H+ A +DG LY WGWN GQVGVE +D H +F
Sbjct: 278 ALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVD------HCSPVEVNFP 331
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ K+V VACG RHTLAL ++ +++ G QL G
Sbjct: 332 DEQ-KIVQVACGWRHTLALTENKNIFSWGRGASGQLGHG 369
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 17/186 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P+ + F VT + CG DH +A + + + ++SWG G G+LG+ +S N P+ I
Sbjct: 63 VPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFN--PQPI 120
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ + QI+ G H T +G +++WG N GQ+G+ D ++ P + + F
Sbjct: 121 VALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLL--PQKI---KAF 175
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
+ +K+ +A G+ HT A+ + L+G GW Y L + S SVPE V +
Sbjct: 176 EGVCVKM--IAAGAEHTTAITEGGDLYGWGWGRYGNLGL-------SDRDDRSVPEKVSS 226
Query: 198 CPIVKL 203
K+
Sbjct: 227 VEGEKM 232
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G +H AL +V SWG G GQLG+ S + P + + V + G
Sbjct: 26 ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDS--EDRPVPTVLTSFDVPRVTSVICGAD 83
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A + D LY+WGW + G++G D V +P P+ Q +K+ +ACG
Sbjct: 84 HTIAYSDDEMQLYSWGWGDFGRLGHGNSSD--VFNPQPI-----VALQGMKIKQIACGDS 136
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H L + + + G N+ QL +G
Sbjct: 137 HCLTVTFNGQVHSWGRNQNGQLGLG 161
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS 81
+ +ACG+ H LALT+ +FSWG G+ GQLG+ D N P+ I ALS
Sbjct: 336 IVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEI-IDRNT-PKMIDALS 384
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+ ISAG HSAA + +WG GQ+G D P P + FD +V
Sbjct: 23 VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDR----PVPTVLTS-FDVP--RV 75
Query: 145 VDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMG 177
V CG+ HT+A DD L+ GW ++ +L G
Sbjct: 76 TSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHG 109
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S VF+ P + + + IACG HCL +T G V SWG GQLG ++ ++
Sbjct: 112 SDVFN-PQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNN--QDSLL 168
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I+A G+ V I+AG H+ A T+ G LY WGW G +G+ + D V P +S
Sbjct: 169 PQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSV--PEKVSS 226
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
E K+V VACG RH++++ +L+ GW++Y QL G G Q ++ R E
Sbjct: 227 VE-----GEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQL--GHGDFQDHLVPRKL--E 277
Query: 194 HVKNCPIVKL 203
+K+ PI ++
Sbjct: 278 ALKDVPISQI 287
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + +ACG+ H ++++ G ++++G GQLG+ ++ PR++
Sbjct: 220 VPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGH--GDFQDHLVPRKLE 277
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL + + QIS G H+ A +DG LY WGWN GQVGVE +D H +F
Sbjct: 278 ALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVD------HCSPVEVNFP 331
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ K+V VACG RHTLAL ++ +++ G QL G
Sbjct: 332 DEQ-KIVQVACGWRHTLALTENKNIFSWGRGASGQLGHG 369
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 17/186 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P+ + F VT + CG DH +A + + + ++SWG G G+LG+ +S N P+ I
Sbjct: 63 VPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFN--PQPI 120
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ + QI+ G H T +G +++WG N GQ+G+ D ++ P + + F
Sbjct: 121 VALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLL--PQKI---KAF 175
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
+ +K+ +A G+ HT A+ + L+G GW Y L + S SVPE V +
Sbjct: 176 EGVCVKM--IAAGAEHTTAITEGGDLYGWGWGRYGNLGL-------SDRDDRSVPEKVSS 226
Query: 198 CPIVKL 203
K+
Sbjct: 227 VEGEKM 232
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G +H AL +V SWG G GQLG+ S + P + + V + G
Sbjct: 26 ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDS--EDRPVPTVLTSFDVPRVTSVICGAD 83
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A + D LY+WGW + G++G D V +P P+ Q +K+ +ACG
Sbjct: 84 HTIAYSDDEMQLYSWGWGDFGRLGHGNSSD--VFNPQPI-----VALQGMKIKQIACGDS 136
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H L + + + G N+ QL +G
Sbjct: 137 HCLTVTFNGQVHSWGRNQNGQLGLG 161
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS 81
+ +ACG+ H LALT+ +FSWG G+ GQLG+ D N P+ I ALS
Sbjct: 336 IVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEI-IDRNT-PKMIDALS 384
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+ ISAG HSAA + +WG GQ+G D P P + FD +V
Sbjct: 23 VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDR----PVPTVLTS-FDVP--RV 75
Query: 145 VDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMG 177
V CG+ HT+A DD L+ GW ++ +L G
Sbjct: 76 TSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHG 109
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 21/179 (11%)
Query: 14 SQVFHMPSRMD----HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
++ +P ++D HF+ V + G H L +T+EG VFSWG G G+LG+
Sbjct: 2939 TENISIPVQLDTLNMHFVKKVT--VHPGGRHSLCITREGKVFSWGEGIDGKLGH--GDVT 2994
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ + P I AL +V+I+ G HSAA T DG LY WG + G++G L H P
Sbjct: 2995 SRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGDSKTL--HIPK 3052
Query: 130 PMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCGVSQ 182
+ +D+ KV+D+ACGSR TLAL D+N +W G ++ +L S GC + Q
Sbjct: 3053 QVKALQDY-----KVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNIPQ 3106
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 88/172 (51%), Gaps = 19/172 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +D +D+ + IA + H LAL+ +G V+SWG+G G+LG+ D EP +
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGH----GDIRREPELV 557
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L + QI+ G +SAA T +G LY WG + G++G D ++ P +
Sbjct: 558 KELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLL----PTLVAGLS 613
Query: 138 DSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG----CGVSQV 183
S VVDVACGS HTLA+ D +W G +Y +L G C V +V
Sbjct: 614 GSH---VVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKV 662
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 74/143 (51%), Gaps = 11/143 (7%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G H + LT VFSWG+G G+LG+ + PR+I AL G +V IS G HSA
Sbjct: 3865 GGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSET--PRKIEALLGKQIVHISCGSSHSA 3922
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RHT 154
A T G LY WG G++G D + P + + + KV+DVACGS T
Sbjct: 3923 AITSKGELYTWGKGRYGRLGHGDGDDCL--KPKLLEALKSY-----KVIDVACGSGDAQT 3975
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LA+ DD+ +W G +Y +L G
Sbjct: 3976 LAITDDDCVWSWGDGDYGKLGRG 3998
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R++ + + V + CG +ALT+ G +++WG G +LG+ ++ D PR++
Sbjct: 4006 PLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTN--DHVRRPRKVAC 4063
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G +V ++AG H A T G ++ WG N+ GQ+G G L+ + P P +
Sbjct: 4064 LQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLG-NGTLNPI---PEPTLVTV---L 4116
Query: 140 QNIKVVDVACGSRHTLA 156
+N+K+ V CGS H+ A
Sbjct: 4117 ENVKLNRVGCGSAHSFA 4133
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + ++ +T IACG + A+T G +++WG GS G+LG+ +S + + P +
Sbjct: 554 PELVKELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNS--EDRLLPTLVAG 611
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEG----KLDLVVHDPHPMSW 133
LSG VV ++ +G H+ A +DG +++WG + G++G G K+ VV
Sbjct: 612 LSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVV-------- 663
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E N +V+V CGS+ ++AL D ++W G ++ +L G
Sbjct: 664 -ETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHG 706
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
S+ H+P ++ D V DIACG LALT V+SWG+G G+LG G++
Sbjct: 3045 SKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLG--RGGSEGC 3102
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P++I AL G V +I+ G S A + G ++ WG + ++G H P
Sbjct: 3103 NIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGND----SHYRSPQ 3158
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
+ ++ ++A G+ H LA+ D ++ G N++ Q
Sbjct: 3159 LIEGPLKKK--RITEIAVGALHCLAVTDTGEVYSWGDNDHGQ 3198
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 11/143 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
++P ++D V IACG LAL+ G V++WG G +LG+ G D++ P+
Sbjct: 3103 NIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGH---GNDSHYRSPQL 3159
Query: 77 IRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I L + +I+ G H A T G +Y+WG N+ GQ +G + V + P
Sbjct: 3160 IEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQ---QGNGNTTV-NKRPQICLG 3215
Query: 136 DFDSQNIKVVDVACGSRHTLALC 158
+ D +K+ +ACGS H++A C
Sbjct: 3216 ELDG--VKISHIACGSSHSIAWC 3236
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ ++ ++ +IACG H A+T +G +++WG G G+LG+ S T P++++A
Sbjct: 2999 PTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGDSKT--LHIPKQVKA 3056
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L V+ I+ G + A T + +++WG + G++G G + D
Sbjct: 3057 LQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNIPQKIDALCGRD- 3115
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V +ACG++ +LAL +W G +Y +L G
Sbjct: 3116 ------VCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHG 3149
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 19/164 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ L + I+CG H A+T +G +++WG G G+LG+ G D ++P+ + A
Sbjct: 3900 PRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGH-GDGDDC-LKPKLLEA 3957
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEG----KLDLVVHDPHPMSW 133
L V+ ++ +G + A T D +++WG + G++G G K L + M+
Sbjct: 3958 LKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRIESLIGMA- 4016
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V V CGS+ ++AL + L+ G +Y +L G
Sbjct: 4017 ----------VCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHG 4050
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ ++ + DIA G HCLALT +F+WG+ + Y S + NMEP I A
Sbjct: 714 PKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWGSDVQ---KYALSSDNYNMEPTCISA 770
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
++ + ++ G + FL W +GG++ +E L
Sbjct: 771 INKEFIAGVACGPAQN-------FL----WTSGGKLEIETHL 801
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 77/194 (39%), Gaps = 56/194 (28%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
VF WG +GQLG G+ P E++ ++ L V I+ G T DG +Y G
Sbjct: 2871 VFVWGLNDKGQLG-GCKGSKVK-SPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSGE 2928
Query: 110 NNGGQVG--------VEGKLD-LVVH-----DPHP--------------MSWSEDFDS-- 139
G++G + +LD L +H HP SW E D
Sbjct: 2929 GANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKL 2988
Query: 140 -----------------QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
++ +V++ACGS H+ A+ D L+ G +Y +L G G S+
Sbjct: 2989 GHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRL--GHGDSK 3046
Query: 183 VSVMTRLSVPEHVK 196
L +P+ VK
Sbjct: 3047 T-----LHIPKQVK 3055
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 11/162 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P D L T +A G LT EG V++ G G G+LG S D + P I
Sbjct: 3794 PVINDIIAALRPTAVAGGEQTLFILTSEGKVYASGLGGSGRLGIGRS--DNIVTPVIIEP 3851
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L L + ++S +GG H+ T + +++WG G++G KL P
Sbjct: 3852 LQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLS----SETPRKIEALL 3907
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
Q +V ++CGS H+ A+ L+ G Y +L G G
Sbjct: 3908 GKQ---IVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDG 3946
>gi|195143651|ref|XP_002012811.1| GL23803 [Drosophila persimilis]
gi|194101754|gb|EDW23797.1| GL23803 [Drosophila persimilis]
Length = 428
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 90/178 (50%), Gaps = 21/178 (11%)
Query: 16 VFHMPSRMDHFLDL--VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
V+ +PS + F D V + CG +H L L G V++WGNG RGQLG + G +
Sbjct: 199 VYSIPSCLHQFPDRQWRVQQLECGHEHALLLNGNGDVYTWGNGLRGQLGQVALGVEET-- 256
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLVVHDP--HP 130
P+ I AL+G+ + I+AGGWHSAA + G LY WG N GQ+G+ K ++ +P +P
Sbjct: 257 PQLIDALAGIKITGIAAGGWHSAAISAFGDLYTWGLNCSGQLGMRVMKPGGLLKEPTVYP 316
Query: 131 MSWSEDF--------------DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ D D + + V GSRHTL L LW GW + QL
Sbjct: 317 LPQLHDLPECCRSSRENESGDDEGVCEPLRVFAGSRHTLLLRRCGRLWASGWCIHGQL 374
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/156 (35%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGVVQ 87
VV IACG H ALT G ++SWG+ S GQLG GTD E P+ I A G+ +
Sbjct: 165 VVVQIACGMKHAFALTNNGELYSWGSNSEGQLGL---GTDIKYEIKPKFISAFIGIPIAF 221
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
I+ GG+HS A ++ G ++ WG N GQ+G+ D + P + QN K+
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNL--PCQLQ-----TLQNAKICYA 274
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
ACG ++ L D ++ CG Y QL G +++
Sbjct: 275 ACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEI 310
Score = 83.6 bits (205), Expect = 7e-14, Method: Composition-based stats.
Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 7/148 (4%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V ACG H LA+ + G +FSWG+ + GQLG +S PR ++ L VVQI
Sbjct: 111 FVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGL-NSKNFMESSPRMVKTLGTSVVVQI 169
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G H+ A T +G LY+WG N+ GQ+G+ + ++ P S I + +A
Sbjct: 170 ACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIK---YEIKPKFISAFI---GIPIAFIA 223
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSM 176
CG H++A+ +++G G N + QL +
Sbjct: 224 CGGYHSIAISKSGAVFGWGKNTFGQLGL 251
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +D + IACG ++ + +TQ G ++S GN GQLG+ + P
Sbjct: 51 IPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIP---- 106
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L + + G +H+ A + G L++WG N GQ+G+ K + + P +
Sbjct: 107 GLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSK-NFMESSPRMVK-----T 160
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
VV +ACG +H AL ++ L+ G N QL +G +
Sbjct: 161 LGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDI 202
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + F+ + + IACG H +A+++ G VF WG + GQLG + D N+ P +++
Sbjct: 208 PKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDT-QDRNL-PCQLQT 265
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L + + G S T DG ++ G GQ+G + ++ P E S
Sbjct: 266 LQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL----PRQVMELMGS 321
Query: 140 QNIKVVDVACGSRHTLALCDDNS---LWGCG 167
V ++CG RHTLAL WG G
Sbjct: 322 ---TVTQISCGKRHTLALVPSRGRVYAWGLG 349
Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q ++P ++ + + ACG + + LT +G VF+ G G GQLG+ S+ + +
Sbjct: 254 TQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNE--IL 311
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDL----VVHDP 128
PR++ L G V QIS G H+ A G +YAWG GQ+G + VVH P
Sbjct: 312 PRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHGP 371
Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
++ WG G++G+ G D + P + + + + Q I ACG +T+ + +
Sbjct: 28 MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQI-----ACGENYTVVITQIGEI 82
Query: 164 WGCGWNEYNQL 174
+ CG N+Y QL
Sbjct: 83 YSCGNNDYGQL 93
>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1080
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + VT +ACG H + L+++G V++WG SRGQLG G + P+ +R+
Sbjct: 113 PRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRS 172
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LS + VVQ+SAGG HS A + G ++ WG N+ GQ+G+ D P + +
Sbjct: 173 LSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDR--ETPTLVHY-----L 225
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
K V ACG HT L D +++ G Y QL
Sbjct: 226 NMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQL 260
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 25 HFLDLVVTDIA-CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
H+L++ T A CG DH LT +G VF++G+G GQLG+ S + PR + L G
Sbjct: 223 HYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRN--ALCPRLVAELWGA 280
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
V +I+ G +H+ T +Y++G N GQ+G
Sbjct: 281 KVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLG 313
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 125 VHDPHPMSWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V PHP ++ I V VACGS+HT+ L D ++ G N QL +G
Sbjct: 104 VDSPHPPFTPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLG 157
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 7/157 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ V +ACG DH +ALT +G +FSWG GQLG + P+++
Sbjct: 135 IPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLGL-GKDISSQASPQQVS 193
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSEDF 137
AL G+ + Q++AGG HS A + G +Y WG NN Q+G+ + K + P+ ++
Sbjct: 194 ALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSL 253
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V V+CG+ HT L + S++ G + QL
Sbjct: 254 D-----VAFVSCGAEHTAVLTQNGSVYTFGDDSAGQL 285
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG--YPSSGTDANMEPREIRALSGLGV 85
D V +ACG H L L +G V S G+ SRGQLG PS + P I+AL V
Sbjct: 36 DQAVVLVACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKV 95
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
V +S G HS A G +Y+WG GQ+G D ++ P ++ + KV+
Sbjct: 96 VHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLI--PKTINALSKY-----KVI 148
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
VACG H++AL +D ++ G N + QL +G +S
Sbjct: 149 QVACGHDHSIALTNDGRIFSWGQNIHGQLGLGKDIS 184
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++CG +H LA+ +G V+SWG G+ GQLG G + P+ I ALS V+Q++
Sbjct: 95 VVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGD--RLIPKTINALSKYKVIQVAC 152
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A T DG +++WG N GQ+G+ GK P +S + I + VA G
Sbjct: 153 GHDHSIALTNDGRIFSWGQNIHGQLGL-GKDISSQASPQQVSALD-----GIPLAQVAAG 206
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
H+ AL ++G G N +QL G+SQ ++ P +
Sbjct: 207 GAHSFALSLSGVVYGWGRNNAHQL----GLSQAKPKEQIFKPYSI 247
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P ++ + + +A G H AL+ G+V+ WG + QLG + + +P I
Sbjct: 189 PQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIA 248
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL L V +S G H+A TQ+G +Y +G ++ GQ+G S S F
Sbjct: 249 ALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRNS------------SSSPKFG 296
Query: 139 SQNIKVVD-----VACGSRHTL 155
Q ++ +D +ACGS HTL
Sbjct: 297 PQKVEWIDGPVSLLACGSYHTL 318
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 49 IVFSWGNGSRGQLGY-PSSGTDANMEPRE-IRALSGLGVVQISAGGWHSAARTQDGFLYA 106
+++ WG GS GQLG G + R RA + VV ++ G H+ DG + +
Sbjct: 1 MLYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVAS 60
Query: 107 WGWNNGGQVG--VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
G N+ GQ+G + + + P + + ++Q KVV V+CG H+LA+C+ ++
Sbjct: 61 CGDNSRGQLGRRLPSGQEKRSYGPELI---QALETQ--KVVHVSCGKEHSLAVCNKGRVY 115
Query: 165 GCGWNEYNQLSMG 177
G + QL G
Sbjct: 116 SWGAGTFGQLGTG 128
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
K Q+F P + L V ++CG +H LTQ G V+++G+ S GQLG SS +
Sbjct: 236 KPKEQIFK-PYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRNSS-SSP 293
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAAR-TQDGFLYAWG 108
P+++ + G V ++ G +H+ R + G L ++G
Sbjct: 294 KFGPQKVEWIDG-PVSLLACGSYHTLVRISTSGQLLSFG 331
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + D + + CG HC+AL+++G +F+WG + GQLG G + + P+ +
Sbjct: 125 RIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGL-GKGEPSKLFPQPL 183
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
++L+G+ + +I+AGG HS A + G ++ WG N GQ+G+ D V P + +
Sbjct: 184 KSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAV--PCHIKF---L 238
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
SQ KVV ++CG HT AL D L+ G + QL G +++
Sbjct: 239 RSQ--KVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANEL 282
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T ++CG H LA+ ++G VF+WG G GQLG ++ T + PR I+ L + Q+
Sbjct: 85 ITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRI-PRLIKRLCDHRIAQVMC 143
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H A ++DG L+ WG N GQ+G+ GK + P P+ I + + G
Sbjct: 144 GNQHCIALSKDGQLFTWGQNTSGQLGL-GKGEPSKLFPQPLK-----SLAGIPLAKITAG 197
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
H+ AL +++G G N+ QL + + R +VP H+K
Sbjct: 198 GDHSFALSLSGAVFGWGKNKAGQLGLN------DIQDR-AVPCHIK 236
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + F + +I CG H + L +G V++ G+ S GQLG+ G + P + A
Sbjct: 24 PRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGHNKPG----ITPEFVGA 79
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L + +S G HS A + G ++AWG GQ+G+ G + V P + D
Sbjct: 80 LDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGL-GTTETAVRIPRLIKRLCDH-- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
++ V CG++H +AL D L+ G N QL +G G
Sbjct: 137 ---RIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKG 173
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + V I+CG +H ALT++G +F++G+GS GQLG+ S+ + + PR +
Sbjct: 231 VPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANE--LLPRRVL 288
Query: 79 ALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V QI+ G H+ A G +YA+G N+ GQ+G G L P+P+ S
Sbjct: 289 ELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGT-GVLS-ADKSPYPLKTSFLS 346
Query: 138 DSQNIKVVDVACGSRHTLALC--DDNSLW 164
S + V + CG H+ L D NS +
Sbjct: 347 GSIHGTVTKITCGGDHSFLLYSNDQNSEY 375
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 18/137 (13%)
Query: 53 WGNGSRGQLGYPSSGTDAN--MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWN 110
WG GQLG G + N EPR +G G+ +I GG HS DG +Y G N
Sbjct: 4 WGKAKDGQLGI---GVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSN 60
Query: 111 NGGQVGVEGKLDLVVHDPHPMS--WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
+ GQ+G H+ ++ + D+Q I + V+CG H+LA+ + ++ G
Sbjct: 61 SCGQLG---------HNKPGITPEFVGALDTQKITL--VSCGQAHSLAVNEQGQVFAWGA 109
Query: 169 NEYNQLSMGCGVSQVSV 185
E QL +G + V +
Sbjct: 110 GEEGQLGLGTTETAVRI 126
>gi|198435272|ref|XP_002131982.1| PREDICTED: similar to Wu:fc44f06 protein [Ciona intestinalis]
Length = 373
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 83/170 (48%), Gaps = 24/170 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +++CG H L T G VFSWG GS GQLG+ + +P+ I AL G+ + ++ A
Sbjct: 156 VRNVSCGNCHSLLSTHNGNVFSWGIGSHGQLGH--GDMETLKQPQLIDALGGVCIKRVGA 213
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL---------------------VVHDPH 129
GGWHSAA LY WGWN GQ G + + + VV +P
Sbjct: 214 GGWHSAALADTDDLYVWGWNQSGQTGFQAPVGICTNSTEALKMENSTKDSNAIGVVLNPT 273
Query: 130 PMSWSEDFDSQN-IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
+ DS + + ++DV+CG RHT A+ +L GW Y Q+ C
Sbjct: 274 LLELEMCADSNSFVSIIDVSCGVRHTAAVTSCGTLITWGWARYGQICHSC 323
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 8/168 (4%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L+ +P + D ++ + CG HC+AL+++G +F+WG S GQLG G
Sbjct: 117 LETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGL-GKGET 175
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ + P +++L+G+ + QI+AGG H A + G ++ WG N GQ+G+ K D V P
Sbjct: 176 SKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAV--PC 233
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + SQ +VV ++CG HT AL L+ G QL G
Sbjct: 234 HIKF---LRSQ--RVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHG 276
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 10/149 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ACG H L L Q+G V++ G+ S GQLG+ +G P + AL + +S
Sbjct: 35 LKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGNS----PELVGALDTQKITMVSC 90
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A + G ++ WG +GGQ+G+E + V P + D + V CG
Sbjct: 91 GRAHSVAVNEQGQVFVWGAGDGGQLGLETA-ETAVRIPRLLKKLCDHS-----ISQVVCG 144
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
++H +AL D L+ G N QL +G G
Sbjct: 145 NQHCIALSRDGQLFTWGQNSSGQLGLGKG 173
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T ++CG H +A+ ++G VF WG G GQLG ++ T + PR ++ L + Q+
Sbjct: 85 ITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRI-PRLLKKLCDHSISQVVC 143
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H A ++DG L+ WG N+ GQ+G+ GK + P P+ I + + G
Sbjct: 144 GNQHCIALSRDGQLFTWGQNSSGQLGL-GKGETSKLSPSPVK-----SLAGIPLAQITAG 197
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H AL +++G G N+ QL +
Sbjct: 198 GDHCFALSLSGAVFGWGKNKAGQLGL 223
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 23/156 (14%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + V I+CG +H ALT+ G +F++G+GSRGQLG+ SS + + PR +
Sbjct: 231 VPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNE--LLPRRVM 288
Query: 79 ALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V QI+ G H+ A G +YA+G N+ GQ+G DL PHP+ DF
Sbjct: 289 ELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTGILADL--RSPHPV--KNDF 344
Query: 138 DSQNIK----------------VVDVACGSRHTLAL 157
+ N++ V+ + CG H+ +
Sbjct: 345 LTLNLRKGKVYLRIDTGFLKYTVIKIICGGDHSFLM 380
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN GQLG G EPR SG G+ +++ GG H+ QDG +Y G N+
Sbjct: 4 WGNARDGQLGIGVEGNPV-FEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSC 62
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G D + P + D+Q K+ V+CG H++A+ + ++ G +
Sbjct: 63 GQLG----HDKAGNSPELVG---ALDTQ--KITMVSCGRAHSVAVNEQGQVFVWGAGDGG 113
Query: 173 QLSMGCGVSQVSV 185
QL + + V +
Sbjct: 114 QLGLETAETAVRI 126
>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
Length = 385
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
++ P ++ D+ + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ VV ++CG HT L D ++ G N QL
Sbjct: 226 KPLSVGA---LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q +P + L+V ++CG +H LA+ +G VF+WG GS GQLG + +
Sbjct: 60 AQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFT 118
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I L+ + ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 119 PKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASP 172
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 173 QRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL 215
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG G P I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + D IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLND-----IKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL LGVV IS G H+A TQDG ++ +G N GQ+G + P P E
Sbjct: 230 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 277 RGPQLVERIDGLVSQIDCGSYHTLA 301
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 37/181 (20%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F WG SR ++ R G ++Q ++G HS + + + G
Sbjct: 1 MYFCWGADSR------------ELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCG 48
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VACGSRHTLALCDDNSLWGCG 167
N+ GQ+G G + P P+ E +VD V+CG H+LA+C ++ G
Sbjct: 49 DNSRGQLGRRGAQRGEL--PEPIQALETL------IVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 168 WNEYNQLSMG----CGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSS 223
QL +G + +MT + + I+++ H++S LS KDS
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKIMT-------LNDIKIIQVSCGHYHSLALS-----KDSQ 148
Query: 224 I 224
+
Sbjct: 149 V 149
>gi|198450864|ref|XP_001358164.2| GA19773 [Drosophila pseudoobscura pseudoobscura]
gi|198131226|gb|EAL27301.2| GA19773 [Drosophila pseudoobscura pseudoobscura]
Length = 402
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 90/178 (50%), Gaps = 21/178 (11%)
Query: 16 VFHMPSRMDHFLDL--VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
V+ +PS + F D V + CG +H L L G V++WGNG RGQLG + G +
Sbjct: 173 VYSIPSCLHQFPDRQWRVQQLECGHEHALLLNGNGDVYTWGNGLRGQLGQVALGVEEM-- 230
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLVVHDP--HP 130
P+ I AL+G+ + I+AGGWHSAA + G LY WG N GQ+G+ K ++ +P +P
Sbjct: 231 PQLIEALAGIKITGIAAGGWHSAAISAFGDLYTWGLNCSGQLGMRVMKPGGLLKEPTVYP 290
Query: 131 MSWSEDF--------------DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ D D + + V GSRHTL L LW GW + QL
Sbjct: 291 LPQLHDLPVCCRSSRENESGDDEGVCEPLRVFAGSRHTLLLRRCGRLWASGWCIHGQL 348
>gi|432862269|ref|XP_004069771.1| PREDICTED: RCC1 domain-containing protein 1-like [Oryzias latipes]
Length = 385
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 93/194 (47%), Gaps = 35/194 (18%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
++AS P S HM ++ +A G +H + LT G V++WG GS GQLG+
Sbjct: 146 YIASKPPFFHSLSPHMQAK----------SLALGGEHVILLTATGAVYTWGQGSHGQLGH 195
Query: 64 PSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV------ 117
G EPR + AL G+ + +SAGGWHS + G LY WGWN GQ+G+
Sbjct: 196 --GGLLPEEEPRTVEALWGMKMSSVSAGGWHSVCISDAGDLYVWGWNESGQLGLPSQRLR 253
Query: 118 ----------EGKL--DLVVHDPHPM----SWSEDFDSQNI-KVVDVACGSRHTLALCDD 160
EG+L + H ++ FD + +V V+CGSRHT A+
Sbjct: 254 KTSEKKTDQQEGELSQNSSTHQEEVFISIQAFPALFDVTPLCEVKTVSCGSRHTAAVTTS 313
Query: 161 NSLWGCGWNEYNQL 174
L+ GW EY QL
Sbjct: 314 GDLYTWGWGEYGQL 327
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 33/165 (20%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR---- 75
P ++ + ++ ++ G H + ++ G ++ WG GQLG PS E +
Sbjct: 204 PRTVEALWGMKMSSVSAGGWHSVCISDAGDLYVWGWNESGQLGLPSQRLRKTSEKKTDQQ 263
Query: 76 -----------------EIRALSGL-------GVVQISAGGWHSAARTQDGFLYAWGWNN 111
I+A L V +S G H+AA T G LY WGW
Sbjct: 264 EGELSQNSSTHQEEVFISIQAFPALFDVTPLCEVKTVSCGSRHTAAVTTSGDLYTWGWGE 323
Query: 112 GGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
GQ+G + +P + E F +Q + VV V CG +T A
Sbjct: 324 YGQLGHQSFSS--SDEPQRV---EFFRAQQLHVVGVVCGPWNTFA 363
>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
Length = 364
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
++ P ++ D+ + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ VV ++CG HT L D ++ G N QL
Sbjct: 226 KPLSVGA---LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q +P + L+V ++CG +H LA+ +G VF+WG GS GQLG + +
Sbjct: 60 AQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFT 118
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I L+ + ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 119 PKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASP 172
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 173 QRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL 215
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG G P I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + D IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLND-----IKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL LGVV IS G H+A TQDG ++ +G N GQ+G + P P E
Sbjct: 230 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 277 RGPQLVERIDGLVSQIDCGSYHTLA 301
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 29/177 (16%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F WG SR ++ R G ++Q ++G HS + + + G
Sbjct: 1 MYFCWGADSR------------ELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCG 48
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VACGSRHTLALCDDNSLWGCG 167
N+ GQ+G G + P P+ E +VD V+CG H+LA+C ++ G
Sbjct: 49 DNSRGQLGRRGAQRGEL--PEPIQALETL------IVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSI 224
QL +G ++S + + + + I+++ H++S LS KDS +
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKIMT--LNDIKIIQVSCGHYHSLALS-----KDSQV 149
>gi|195053490|ref|XP_001993659.1| GH20910 [Drosophila grimshawi]
gi|193895529|gb|EDV94395.1| GH20910 [Drosophila grimshawi]
Length = 375
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 96/200 (48%), Gaps = 23/200 (11%)
Query: 16 VFHMPSRMDHF--LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++ +PS + F V + CG +H + L G V+SWGNG RGQLG+ + G
Sbjct: 163 IYSIPSCLHQFPVRQWRVQQLECGNEHAILLNGNGDVYSWGNGLRGQLGHEALGVQET-- 220
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLVVHDP--HP 130
PR I AL+G+ + I+AGGWHSAA + G LY WG N GQ+G+ K ++ +P +P
Sbjct: 221 PRLIDALAGIKITHIAAGGWHSAAISAFGDLYTWGSNCNGQLGMRVLKPGGLLKEPTVYP 280
Query: 131 MSWSEDFDS-----------QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
+ D + + GSRHTL + +WG GW + QL
Sbjct: 281 LPQLHDLPECCEAAQDADADAVCSPLRICAGSRHTLLVRSCGRVWGSGWTIHGQLG---- 336
Query: 180 VSQVSVMTRLSVPEHVKNCP 199
Q+ T L E + + P
Sbjct: 337 -KQLEKRTYLDKFEAIYDAP 355
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats.
Identities = 54/151 (35%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++CG +H LAL G VFSWGNG G LG+ D P+ I AL GL V I
Sbjct: 1596 IQSVSCGSEHTLALDYIGQVFSWGNGEGGLLGH--GNEDVCPSPKIIEALKGLNVDFIVC 1653
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKL----DLVVHDPHPMSWSEDFDSQNIKVVD 146
GG HS T++ +Y+WG N GGQ+G++ KL + P + + + + V+
Sbjct: 1654 GGLHSLVLTKNRQVYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKG----NLEGVGVIQ 1709
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+A G H+LAL + ++G G+N Q+ +G
Sbjct: 1710 IAAGEAHSLALALNGQVYGWGYNMNGQIGLG 1740
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS-GTDAN---MEPR 75
P ++ L V I CG H L LT+ V+SWG GQLG T+ P+
Sbjct: 1637 PKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQLGIDKKLFTNEKCYLTTPK 1696
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPH 129
++ L G+GV+QI+AG HS A +G +Y WG+N GQ+G+ + D V++P
Sbjct: 1697 RVKGNLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQ 1752
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 48 GIVFSWGNGSRGQLG--------YPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
G++FSWG + GQ+G S N P+ I L V ++ G HS A T
Sbjct: 1500 GVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNF-PKLIVPLKDTIVTSVACGYQHSVAIT 1558
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
G + AWG N+ Q+G+ K V P P+ + S V+CGS HTLAL
Sbjct: 1559 YAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQS-------VSCGSEHTLAL 1609
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLAL----TQEGIVFSWGNGSRGQLGYPSS 66
+ ++ VF +P +MD F + V ++CG +H LAL T+ ++F+WG GQLG +
Sbjct: 1801 RAVTDVF-IPKKMDCFHQIPVLHVSCGHNHSLALVVADTKHYMLFAWGMHKHGQLGIGET 1859
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQD 101
G ++++ PR I L + ++ G +HS D
Sbjct: 1860 GQNSSV-PRPITYLQDVTTYSMACGSYHSLVVAND 1893
Score = 44.7 bits (104), Expect = 0.033, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 74 PREIRALSGLGVVQISAGGWHS----AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
P+++ + V+ +S G HS A T+ L+AWG + GQ+G+ G+ P
Sbjct: 1809 PKKMDCFHQIPVLHVSCGHNHSLALVVADTKHYMLFAWGMHKHGQLGI-GETGQNSSVPR 1867
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
P+++ +D + +ACGS H+L + +D
Sbjct: 1868 PITYLQD-----VTTYSMACGSYHSLVVAND 1893
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ +V+ +ACG DH LA++ G V WG RGQ G + + PR +
Sbjct: 76 YKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRIL 135
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L+ V++ G HS A T+DG L++WG N GQ+G+ + P +E
Sbjct: 136 KHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRP-----TELT 190
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + +V VACG H+ AL S++G G N+ QL +G
Sbjct: 191 SLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLG 230
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 5/149 (3%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+V+ +ACG DH LA++ V WG RGQ G + + PR +R L+ V++
Sbjct: 427 VVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKV 486
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G HS A T+DG L++WG N GQ+G+ + P +E + + +V VA
Sbjct: 487 CCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRP-----TELTSLRGVPLVRVA 541
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG H+ AL S++G G N+ QL +G
Sbjct: 542 CGGFHSFALTISGSVFGWGKNDVGQLGLG 570
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 7/165 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + H + CG H +ALT++G +FSWG+ + GQLG + T+ P E+ +
Sbjct: 132 PRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTS 191
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G+ +V+++ GG+HS A T G ++ WG N+ GQ+G+ K + +P + + S
Sbjct: 192 LRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKEN----KAYP-TLLRNMRS 246
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
Q +K +ACG HT L D ++ G QL G ++V+
Sbjct: 247 QMVK--HIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVN 289
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 7/165 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + H + CG H +ALT++G +FSWG+ + GQLG + T+ P E+ +
Sbjct: 472 PRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTS 531
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G+ +V+++ GG+HS A T G ++ WG N+ GQ+G+ K + +P + + S
Sbjct: 532 LRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKEN----KSYP-TLLRNMRS 586
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
Q +K +ACG HT L D ++ G QL G ++V+
Sbjct: 587 QMVK--HIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVN 629
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 15/187 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQIS 89
V I+CG H + +G ++ G S+GQL G D N +P ++ AL + + ++
Sbjct: 39 VQSISCGKHHTGIVLDDGTLYMCGANSKGQL-----GQDRNQYKPVQVSALETVVIKHVA 93
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A + G + WG N+ GQ G+ G ++ + P P Q +K V
Sbjct: 94 CGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIE---NKPRPRILKHLASYQFVK---VC 147
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
CGS H++AL D L+ G N Y QL +G V+ + R + ++ P+V++ +
Sbjct: 148 CGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYT--DRPTELTSLRGVPLVRVACGGF 205
Query: 209 NSARLSV 215
+S L++
Sbjct: 206 HSFALTI 212
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
F WG+ GQLG +G E +E+ LSG V IS G H+ DG LY G
Sbjct: 3 TFCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCG 62
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N+ GQ+G D + P +S E + + VACG HTLA+ D + G G
Sbjct: 63 ANSKGQLGQ----DRNQYKPVQVSALE-----TVVIKHVACGDDHTLAVSDRGQVLGWGR 113
Query: 169 NEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
N+ Q + G + R + +H+ + VK+
Sbjct: 114 NDRGQCGLATG--DIENKPRPRILKHLASYQFVKV 146
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 81/151 (53%), Gaps = 14/151 (9%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGVVQ 87
VV +ACG +H LALT G ++SWG+ S GQLG GTD E P+ I +L+G+ +
Sbjct: 215 VVVQVACGINHVLALTNNGKLYSWGSNSDGQLGL---GTDVKNEIKPKLISSLAGVPIAF 271
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVD 146
I+ GG+HS A ++ G ++ WG N GQ+G ++D + + QN KV
Sbjct: 272 ITCGGYHSMAISKSGAVFGWGKNTFGQLG--------LNDTRNRNLPRQLQTLQNAKVCY 323
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
ACG ++ L D ++ CG Y QL G
Sbjct: 324 AACGEEFSVFLTVDGGVFTCGAGMYGQLGHG 354
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG H LA+ + G +FSWG+ + GQLG S P +RAL VVQ+
Sbjct: 161 FVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNL-IECVPHMVRALGTSVVVQV 219
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G H A T +G LY+WG N+ GQ+G+ V ++ P S + + +
Sbjct: 220 ACGINHVLALTNNGKLYSWGSNSDGQLGLGTD---VKNEIKPKLIS---SLAGVPIAFIT 273
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSM 176
CG H++A+ +++G G N + QL +
Sbjct: 274 CGGYHSMAISKSGAVFGWGKNTFGQLGL 301
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +D + IACG ++ + +T++G V+S GN GQLG+ + P
Sbjct: 101 VPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRLQLIP---- 156
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK--LDLVVHDPHPMSWSED 136
L +++ G H+ A + G L++WG N GQ+G+ K ++ V H + S
Sbjct: 157 GLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTS-- 214
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
VV VACG H LAL ++ L+ G N QL +G V
Sbjct: 215 ------VVVQVACGINHVLALTNNGKLYSWGSNSDGQLGLGTDVK 253
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P ++ + V ACG + + LT +G VF+ G G GQLG+ T + PR++
Sbjct: 308 NLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGH--GNTSNEILPRQV 365
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V QIS G H+ G +YAWG GQ+G
Sbjct: 366 MELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLG 405
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + + I CG H +A+++ G VF WG + GQLG + T PR+++
Sbjct: 258 PKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLGL--NDTRNRNLPRQLQT 315
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V + G S T DG ++ G GQ+G + ++ P E S
Sbjct: 316 LQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSNEIL----PRQVMELMGS 371
Query: 140 QNIKVVDVACGSRHTLALCDDNS---LWGCG 167
V ++CG RHTL L WG G
Sbjct: 372 ---TVTQISCGKRHTLGLVPSRGRVYAWGLG 399
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+F WG+ G+LG + + PRE+ + QI+ G ++ T+DG +Y+ G
Sbjct: 78 MFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGN 137
Query: 110 NNGGQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
N+ GQ+G E +L L+ D+ K VACG+ HTLA+ + L+
Sbjct: 138 NDYGQLGHEKGRKRLQLI----------PGLDAFVFK--KVACGAHHTLAVNEWGQLFSW 185
Query: 167 GWNEYNQLSM 176
G N QL +
Sbjct: 186 GSNAEGQLGL 195
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 101 DGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
D ++ WG G++G+ G D + P + + + ++ +ACG +T+ + D
Sbjct: 75 DKNMFCWGSTIHGELGLGGIEDENILVPRELDFQ-----KATEIEQIACGENYTVLITRD 129
Query: 161 NSLWGCGWNEYNQLSMGCGVSQVSVM 186
++ CG N+Y QL G ++ ++
Sbjct: 130 GQVYSCGNNDYGQLGHEKGRKRLQLI 155
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + IACG HCLAL G +FSWG + GQLG T PR +
Sbjct: 179 PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSH 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G+ + ++ G HS T G ++ WG N+ GQ+G+ + D + HP + S
Sbjct: 239 LVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRL----HPTVL-KPLRS 293
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
Q IK V CG HT AL D ++ G Y QL G V++
Sbjct: 294 QRIK--HVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNE 334
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG H LAL+ G VFSWG GQLG + ++ + P+ I+ L+ L +VQI+
Sbjct: 137 IRAVACGEAHSLALSDAGQVFSWGCNRNGQLGC-GTEEESRLRPKVIKKLATLHIVQIAC 195
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H A +G L++WG N GQ+G+ G+ D ++ P S + + VACG
Sbjct: 196 GAVHCLALANNGELFSWGGNASGQLGL-GR-DSTGNERLPRRVSHLV---GVPLALVACG 250
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
+ H++ L +++ G N QL +
Sbjct: 251 AMHSVGLTPSGTVFVWGRNSCGQLGL 276
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE-IR 78
P R+ F V ++ACG H L L G V+S G GQL G D +M E +
Sbjct: 76 PERVRRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQL-----GQDRSMRKLEQVA 130
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
ALS + ++ G HS A + G +++WG N GQ+G G + P +
Sbjct: 131 ALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGC-GTEEESRLRPKVIK-----K 184
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +V +ACG+ H LAL ++ L+ G N QL +G
Sbjct: 185 LATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLG 223
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ H + + + +ACG H + LT G VF WG S GQLG S + P +
Sbjct: 231 RLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGL--SDQRDRLHPTVL 288
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L + + G H+AA T DG ++ +G GQ+G K++ V P E
Sbjct: 289 KPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAV----PRRVVELM 344
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + ++CG HT+A
Sbjct: 345 GT---AISQLSCGRCHTVA 360
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 49 IVFSWGNGSRGQLGYP--SSGTDANM---EPREIRALSGLGVVQISAGGWHSAARTQDGF 103
+++SWG G G+LG G D +P +R V +++ G H+ +G
Sbjct: 46 LLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGS 105
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+Y+ G N+ GQ+G + + + + I+ VACG H+LAL D +
Sbjct: 106 VYSCGANDFGQLGQDRSM-------RKLEQVAALSAHEIRA--VACGEAHSLALSDAGQV 156
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
+ G N QL GCG + S + R V + + IV++
Sbjct: 157 FSWGCNRNGQL--GCGTEEESRL-RPKVIKKLATLHIVQI 193
>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6 [Sarcophilus harrisii]
Length = 1032
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + VV ++CG +H LA+ + G ++SWG+GSRGQLG ++ P+ I A
Sbjct: 80 PAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSRGQLGIKEVKDQCSI-PKNIAA 138
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LS ++Q+S G +HS A TQDG +++WG N+ GQ+G L + P S
Sbjct: 139 LSRDKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQLG------LGTNFPSQASPQRVNSL 192
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM-GCGVSQVSV 185
I + VA G H+ AL + +G G N+ QL++ G S VS+
Sbjct: 193 DGIPLAQVAAGGSHSFALSLSGTSYGWGRNKEGQLALSGKNASVVSI 239
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ACG H L L +G V+S GN S GQLG + P I+AL VV +S
Sbjct: 39 IVQAACGERHSLLLLADGTVWSCGNNSYGQLG--RKNIKKSKRPAPIQALETQVVVSVSC 96
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A + G +Y+WG + GQ+G++ D + + S D K++ V+CG
Sbjct: 97 GKEHSLAICKTGRIYSWGSGSRGQLGIKEVKDQCSIPKNIAALSRD------KIIQVSCG 150
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
H++AL D ++ G N++ QL +G
Sbjct: 151 HYHSIALTQDGKVFSWGDNDHGQLGLG 177
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIR-----ALSGLGVVQISAGGWHSAARTQDGF 103
+ + WG+ S QLG ++G A+ PR +R +L G +VQ + G HS DG
Sbjct: 1 MYYCWGDNSFRQLGI-NAGRRAS--PRVVRCREGASLGGQQIVQAACGERHSLLLLADGT 57
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+++ G N+ GQ+G + P P+ + ++Q VV V+CG H+LA+C +
Sbjct: 58 VWSCGNNSYGQLGRKNIKK--SKRPAPI---QALETQ--VVVSVSCGKEHSLAICKTGRI 110
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
+ G QL + Q S+ ++ K I+++ H++S L+
Sbjct: 111 YSWGSGSRGQLGIKEVKDQCSIPKNIAALSRDK---IIQVSCGHYHSIALT 158
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 68/171 (39%), Gaps = 31/171 (18%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM------- 72
P R++ + + +A G H AL+ G + WG GQL SG +A++
Sbjct: 186 PQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWGRNKEGQLAL--SGKNASVVSINYCI 243
Query: 73 ----EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
E + + + Q + + + DG + +G NN GQ+G L P
Sbjct: 244 WHEAEALTCKRSNSIKEFQGLKELLNRSRQIADGKVLTFGSNNSGQLG--HGLITKPRGP 301
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
+ +E F +ACGS HTLA + C + LS GCG
Sbjct: 302 QIVESAELFS-------QIACGSHHTLA-------YACTSGQV--LSFGCG 336
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+PS +D D V DIACG H LALT +G +++WG+ GQ+G + + P+ +
Sbjct: 126 VPSVLD---DKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLN 182
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G VV IS G S A T G +Y+WG N GQ+G+ V +P ++
Sbjct: 183 VGLNGKKVVHISCGDSSSVAVTDSGEVYSWGHNGVGQLGLGNCTSQV--EPQKVA----- 235
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
I + V CG HTLAL D+ L+ G N Y QL + S V + T+L VPE +
Sbjct: 236 TFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGLNTD-SNVWIPTKLEVPEMGR- 293
Query: 198 CPIVKLFAEHWNSARLSVPE 217
I+ + H++ L++ E
Sbjct: 294 --ILDIVTSHYHHISLAMSE 311
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI- 77
P +++ V A G H LALT+EG V+SWG +LG S T+ + P +
Sbjct: 70 PKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNKS--TNEGLTPTLVP 127
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L VV I+ GG HS A T G +YAWG N GQVG L V P P +
Sbjct: 128 SVLDDKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTILSTV--QPIPKLLNVGL 185
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+ + KVV ++CG ++A+ D ++ G N QL +G SQV
Sbjct: 186 NGK--KVVHISCGDSSSVAVTDSGEVYSWGHNGVGQLGLGNCTSQV 229
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 9/152 (5%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG-GWHSAA 97
+ L +T++ +V+ GN + G LG + T + + P++I AL G V + G G H A
Sbjct: 37 NETLLVTKDDMVYGIGNNTYGCLG--TGDTQSTIYPKKIEALCGKSVKTFAYGKGPHVLA 94
Query: 98 RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
T++G +Y+WG+N+ ++G + + + P + F VVD+ACG H+LAL
Sbjct: 95 LTEEGKVYSWGYNDYCELGNKSTNEGLTPTLVPSVLDDKF------VVDIACGGHHSLAL 148
Query: 158 CDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ ++ G N Q+ G +S V + +L
Sbjct: 149 TNKGEIYAWGHNVSGQVGCGTILSTVQPIPKL 180
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P ++ F +V+ + CG+ H LAL+ EG+++ WG S GQLG TD+N+ P ++
Sbjct: 231 PQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGL---NTDSNVWIPTKLE 287
Query: 79 ALSGLGVVQISAGGWH--SAARTQDGFLYAWGWNNGGQVGV 117
++ I +H S A ++ ++ WG G + V
Sbjct: 288 VPEMGRILDIVTSHYHHISLAMSEGNRIFMWGQCLGQSIKV 328
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + IACG HCLAL G +FSWG + GQLG T PR +
Sbjct: 185 PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSH 244
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G+ + ++ G HS T G ++ WG N+ GQ+G+ + D + HP + S
Sbjct: 245 LVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRL----HPTVL-KPLRS 299
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
Q IK V CG HT AL D ++ G Y QL G V++
Sbjct: 300 QRIK--HVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNE 340
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG H LAL+ G VFSWG GQLG + ++ + P+ I+ L+ L +VQI+
Sbjct: 143 IRAVACGEAHSLALSDAGQVFSWGCNRNGQLGC-GTEEESRLRPKVIKKLATLHIVQIAC 201
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H A +G L++WG N GQ+G+ G+ D ++ P S + + VACG
Sbjct: 202 GAVHCLALANNGELFSWGGNASGQLGL-GR-DSTGNERLPRRVSHLV---GVPLALVACG 256
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
+ H++ L +++ G N QL +
Sbjct: 257 AMHSVGLTPSGTVFVWGRNSCGQLGL 282
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE-IR 78
P R+ F V ++ACG H L L G V+S G GQL G D +M E +
Sbjct: 82 PERVRRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQL-----GQDRSMRKLEQVA 136
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
ALS + ++ G HS A + G +++WG N GQ+G G + P +
Sbjct: 137 ALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGC-GTEEESRLRPKVIK-----K 190
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +V +ACG+ H LAL ++ L+ G N QL +G
Sbjct: 191 LATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLG 229
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ H + + + +ACG H + LT G VF WG S GQLG S + P +
Sbjct: 237 RLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGL--SDQRDRLHPTVL 294
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L + + G H+AA T DG ++ +G GQ+G K++ V P E
Sbjct: 295 KPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAV----PRRVVELM 350
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + ++CG HT+A
Sbjct: 351 GT---AISQLSCGRCHTVA 366
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 49 IVFSWGNGSRGQLGYP--SSGTDANM---EPREIRALSGLGVVQISAGGWHSAARTQDGF 103
+++SWG G G+LG G D +P +R V +++ G H+ +G
Sbjct: 52 LLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGS 111
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+Y+ G N+ GQ+G + + + + I+ VACG H+LAL D +
Sbjct: 112 VYSCGANDFGQLGQDRSM-------RKLEQVAALSAHEIRA--VACGEAHSLALSDAGQV 162
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
+ G N QL GCG + S + R V + + IV++
Sbjct: 163 FSWGCNRNGQL--GCGTEEESRL-RPKVIKKLATLHIVQI 199
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 12/176 (6%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
R+ + ++T I+CG H LALT G VFSWG+ + GQLG+ + PR I+A+
Sbjct: 86 KRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAE-NGRQPTPRMIKAI 144
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ 140
VVQI++G +H A T +G LYAWG N+ GQ+G+ + V P P
Sbjct: 145 GAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKV---PMPTLIQ---SLA 198
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG-----CGVSQVSVMTRLSV 191
+ + +ACG H+ A+ +++G G N + QL + C +Q+ + L V
Sbjct: 199 GVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGV 254
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S+ MP+ + + + IACG +H A+++ G +F WG + GQLG + ++
Sbjct: 185 SEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL--NDLNSRCY 242
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++R L LGV IS G S T +G ++ G GQ+G + +V P +
Sbjct: 243 PTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIV--PRKV-- 298
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMG 177
F+ K+ +ACG RHTLA ++G G QL +G
Sbjct: 299 ---FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIG 340
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 83/180 (46%), Gaps = 24/180 (13%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +MD V + CG H L LT+EG +++ GN GQLG+ T N PR R
Sbjct: 26 VPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGH-DLDTLPNKRPRMSR 84
Query: 79 -----ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+L + IS G HS A T G +++WG N GQ+G + + P P
Sbjct: 85 FKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENG---RQPTP--- 138
Query: 134 SEDFDSQNIK------VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
+ IK VV +A G H LAL ++ L+ G N Y QL +G +V + T
Sbjct: 139 ------RMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPT 192
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WGN + G+LG + M PR++ VV++ G H+ T++G +YA G
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N+ GQ+G + LD + + MS + S +N + ++CG+ H+LAL + ++ G
Sbjct: 63 NDHGQLGHD--LDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS 120
Query: 169 NEYNQL 174
N QL
Sbjct: 121 NAVGQL 126
>gi|196003320|ref|XP_002111527.1| hypothetical protein TRIADDRAFT_55637 [Trichoplax adhaerens]
gi|190585426|gb|EDV25494.1| hypothetical protein TRIADDRAFT_55637 [Trichoplax adhaerens]
Length = 346
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 85/153 (55%), Gaps = 13/153 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++CG +H L L+ G VFS+G GSRGQLG+ + + N PR I AL GL ++
Sbjct: 168 VNLVSCGKEHALILSITGEVFSFGRGSRGQLGHDTLDNEGN--PRVIEALQGLQFKLVTC 225
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL-----VVHDPHPMSWSEDFDSQNIKVV 145
GGWHS A + G Y+WGWN Q+G++ L+ + P + + +++N++
Sbjct: 226 GGWHSFAISSSGDAYSWGWNQSYQLGIDSNLEANEVGSCIATPTLI----EIENENVQA- 280
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
++ GS+H+ + + ++ GW +Y QL C
Sbjct: 281 -ISGGSKHSACITESGKVYTWGWGKYGQLGHNC 312
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+ G H +T+ G V++WG G GQLG+ + D+ P+ + ALS ++
Sbjct: 278 VQAISGGSKHSACITESGKVYTWGWGKYGQLGH--NCYDSVKVPQLVTALSEKLASTVTC 335
Query: 91 GGWHS 95
G WH+
Sbjct: 336 GFWHT 340
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V+ IACG +H +ALT +G ++SWG+ GQLG S T ++P+ I L+ + + I+
Sbjct: 138 VIVQIACGIEHSIALTNDGELYSWGSNREGQLGI-GSHTVTEIKPKRIITLAAVPIAFIA 196
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GG+H+ ++ G ++AWG N GQ+G+ +V P + +N KV AC
Sbjct: 197 CGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRIV--PCQLR-----TLRNAKVCYAAC 249
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
G ++ L D ++ CG Y QL G G++++
Sbjct: 250 GEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEI 283
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 78/170 (45%), Gaps = 8/170 (4%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V IACG H LA+ + G +FSWG +GQLG S PR ++AL +VQI
Sbjct: 84 FVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNSVDC-TERTPRMVKALGTSVIVQI 142
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G HS A T DG LY+WG N GQ+G+ H + + + +A
Sbjct: 143 ACGIEHSIALTNDGELYSWGSNREGQLGIGS------HTVTEIKPKRIITLAAVPIAFIA 196
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
CG HT+ + ++ G N + QL + Q V +L + K C
Sbjct: 197 CGGYHTVVISKSGVVFAWGRNTFGQLGLN-DTQQRIVPCQLRTLRNAKVC 245
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP ++D V IACG ++ + +T +G V+S GN GQLG+ + + P
Sbjct: 24 MPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDYGQLGHEKARKRLQLIP---- 79
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L +I+ G H+ A + G L++WG N GQ+G+ +D P +
Sbjct: 80 GLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGL-NSVDCTERTPRMVK-----A 133
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC-GVSQVS---VMTRLSVP 192
+V +ACG H++AL +D L+ G N QL +G V+++ ++T +VP
Sbjct: 134 LGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVP 191
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + IACG H + +++ G+VF+WG + GQLG + T + P ++R
Sbjct: 181 PKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGL--NDTQQRIVPCQLRT 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V + G S T DG ++ G GQ+G ++ ++ P E S
Sbjct: 239 LRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEIL----PRQVMELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNS---LWGCG 167
V ++CG RHTLAL WG G
Sbjct: 295 ---TVTQISCGKRHTLALVPSRGRVYAWGLG 322
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + V ACG + + LT +G VF+ G G GQLG+ + + + PR++
Sbjct: 232 VPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNE--ILPRQVM 289
Query: 79 ALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V QIS G H+ A G +YAWG GQ+G
Sbjct: 290 ELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 15/147 (10%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+F WG+ G+LG + PR++ V QI+ G ++ T DG +Y+ G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ GQ+G E + P D+ K +ACGS HTLA+ + L+ G N
Sbjct: 61 NDYGQLGHEKARKRLQLIP-------GLDAFVFK--KIACGSCHTLAVNEWGQLFSWGCN 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK 196
QL G++ V R P VK
Sbjct: 112 MKGQL----GLNSVDCTER--TPRMVK 132
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALT-QEGIVFSWGNGSRGQLGYPSS 66
+P ++ + VT I+CG H LAL G V++WG G GQLG +S
Sbjct: 284 LPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRAS 332
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 8/158 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P + D+ + +ACG H LAL++E ++SWG GQLG S + PR
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESA-PRH 183
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I++LSG+ I+AGG HS A T G ++ WG N GQ+G+ + D DP + +
Sbjct: 184 IKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDR--SDPALL---KS 238
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
SQ K++ + CG HT AL + ++ G Y QL
Sbjct: 239 LRSQ--KIIYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 16/183 (8%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+V P R D F++ V D+ CG H + +G V++ G GQLG+ S +P
Sbjct: 20 EVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKS----RKKP 75
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
++ AL +V +S G H+ A G +++WG GQ+GV D + + S S
Sbjct: 76 EQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLS 135
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
+ I++V VACG H+LAL +++++ G N+Y QL +G S + S P H
Sbjct: 136 D------IQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLG------SEKRKESAPRH 183
Query: 195 VKN 197
+K+
Sbjct: 184 IKS 186
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
++ ++CG H LAL +G VFSWG+ + GQ+G S D PR I++LS + +VQ++
Sbjct: 85 IIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGV-SIAEDYIRVPRNIKSLSDIQIVQVA 143
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G HS A +++ +Y+WG N GQ+G+ + H S S I +A
Sbjct: 144 CGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLS------GIPFAHIAA 197
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSM 176
G H+ AL +++G G N++ QL +
Sbjct: 198 GGGHSFALTISGAIFGWGRNKFGQLGL 224
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALT-QEGIVFSWGNGSRGQLGYPSS 66
P ++ + +VT IACG H LA G ++S+G G GQLG S+
Sbjct: 285 PRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGST 332
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 20/174 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPR 75
P ++ + + ++CG H LAL+++G V+SWG S+GQLG +PS + P+
Sbjct: 117 PKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQAS-----PQ 171
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWS 134
+R+L G+ + Q++AGG HS A + G + WG NN GQ+ + G V + PH +
Sbjct: 172 RVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGAL 231
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLW-----GCGWNEYNQLSMGCGVSQV 183
+ D V+ ++CG HT L + ++ CG YN + G QV
Sbjct: 232 KSLD-----VIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQV 280
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L+V ++CG +H LA+ +G VF+WG GS GQLG + P++I+
Sbjct: 64 PGLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEEC-KEKIFTPKKIKT 122
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G+ ++Q+S G +HS A ++DG +Y+WG N+ GQ+G+ + P S
Sbjct: 123 LTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEF------PSQASPQRVRSL 176
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 177 EGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLAL 213
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 8/147 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ACG H L L +G V S G+ ++GQLG G P I+AL L V +S
Sbjct: 23 VRQAACGERHSLLLLSDGTVHSCGDNTQGQLG--RRGKPREERPGLIKALETLLVGLVSC 80
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A G ++AWG + GQ+G+E + + + + IK++ V+CG
Sbjct: 81 GKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLT------GIKIIQVSCG 134
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
H+LAL +D ++ G N QL +G
Sbjct: 135 HYHSLALSEDGQVYSWGKNSQGQLGLG 161
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 19/143 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ + + +A G H AL+ G F WG+ + GQL + T +P I
Sbjct: 170 PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIG 229
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL L V+ IS G H+A TQ+G ++ +G N+ GQ+G ++P ++
Sbjct: 230 ALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLG---------YNPT----AKKRG 276
Query: 139 SQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 277 PQQVEGIDGLVSQIDCGSYHTLA 299
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P + L V I+CG++H LTQ G VF++G+ S GQLGY + T P+++
Sbjct: 223 YKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGY--NPTAKKRGPQQV 280
Query: 78 RALSGLGVVQISAGGWHSAA 97
+ GL V QI G +H+ A
Sbjct: 281 EGIDGL-VSQIDCGSYHTLA 299
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 30/169 (17%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F WGNG GQL +G G V Q + G HS DG +++ G
Sbjct: 1 MYFCWGNG--GQLRRVPTGA------------GGAEVRQAACGERHSLLLLSDGTVHSCG 46
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N GQ+G GK P + + V V+CG H+LA+C ++ G
Sbjct: 47 DNTQGQLGRRGK-------PREERPGLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWGA 99
Query: 169 NEYNQLSMGCGVSQVSVMTRLSVPEHVKN---CPIVKLFAEHWNSARLS 214
QL G+ + ++ P+ +K I+++ H++S LS
Sbjct: 100 GSEGQL----GIEECK--EKIFTPKKIKTLTGIKIIQVSCGHYHSLALS 142
>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
jacchus]
Length = 1006
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
++ P ++ + + ++CG H LAL+++ VFSWG S GQLG +
Sbjct: 112 FKEINFTPKKITTLTGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL-GKELSSQA 170
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P+ +R+L G+ V Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V P+S
Sbjct: 171 SPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVQVQSNKPLS 229
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L D ++ G N QL
Sbjct: 230 IGA---LKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQL 268
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 7/173 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + L ++CG +H LA+ +G VF+WG GS GQLG + N P++I
Sbjct: 65 LPEPVQALKTLKFNLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEINFTPKKIT 123
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L+G+ ++Q+S G +HS A ++D +++WG N+ GQ+G+ +L S
Sbjct: 124 TLTGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSL----- 178
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
+ I V VA G H+ AL + +G G N QL++ QV LS+
Sbjct: 179 -EGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSI 230
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 11/181 (6%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G SRGQLG G P ++AL L +S G H
Sbjct: 29 ASGERHALLLLTNSSVHSCGENSRGQLG--RRGAPRGDLPEPVQALKTLKFNLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P ++ IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEINFTPKKIT-----TLTGIKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
LAL D+ ++ G N + QL +G +S + R+ E + P+ ++ A +S LS
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGI---PVAQVAAGGAHSFALS 197
Query: 215 V 215
+
Sbjct: 198 L 198
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 15/141 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + V +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVQVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL LGV+ IS G H+A +QDG ++ +G N+ GQ+G ++P P
Sbjct: 230 IGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLG---------YNPTPKKRGPQ 280
Query: 137 F-DSQNIKVVDVACGSRHTLA 156
+ + V + CG HT+A
Sbjct: 281 IVERIDGLVSQIDCGGDHTIA 301
>gi|55832768|gb|AAV66897.1| truncated HERC6 [Homo sapiens]
Length = 322
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
++ P ++ D+ + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ VV ++CG HT L D ++ G N QL
Sbjct: 226 KPLSVGA---LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q +P + L+V ++CG +H LA+ +G VF+WG GS GQLG + +
Sbjct: 60 AQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFT 118
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I L+ + ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 119 PKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASP 172
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 173 QRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL 215
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG G P I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGR--RGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + D IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLND-----IKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+ AL LGVV IS G H+A TQDG ++ +G N GQ+G
Sbjct: 230 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P + +L V I+CG H LTQ+G VF++G+ GQLGY S T P+ +
Sbjct: 225 NKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY--SPTPEKRGPQLV 282
Query: 78 RALSGLGVVQISAG 91
+ GL V QI G
Sbjct: 283 ERIDGL-VSQIDCG 295
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 29/177 (16%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F WG SR ++ R G ++Q ++G HS + + + G
Sbjct: 1 MYFCWGADSR------------ELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCG 48
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VACGSRHTLALCDDNSLWGCG 167
N+ GQ+G G + P P+ E +VD V+CG H+LA+C ++ G
Sbjct: 49 DNSRGQLGRRGAQRGEL--PEPIQALETL------IVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSI 224
QL +G ++S + + + + I+++ H++S LS KDS +
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKIMT--LNDIKIIQVSCGHYHSLALS-----KDSQV 149
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 10/159 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + L++ IACG HCLA+T + V SWG G+LG ++ + ++ P++I+
Sbjct: 109 IPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTA--EDSLLPQKIQ 166
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+ + ++AG HS A T+DG LY WGW G +G+ + D ++ P + D D
Sbjct: 167 IFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLL----PEKVTVDGD 222
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
K+ VACG RHT+ + L+ GW +Y QL G
Sbjct: 223 ----KMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHG 257
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 22/199 (11%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
+++S+V P R V ++ G H +AL +V SWG G GQLG+ TD
Sbjct: 4 EVMSEVAAPPRR--------VLLVSAGASHSVALLSGNVVCSWGRGEDGQLGH--GDTDD 53
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ P ++ AL G ++ ++ G H+ AR++ G +Y+WGW + G++G DL++ PH
Sbjct: 54 RLFPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLI--PH 111
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM-TR 188
P+ Q + + +ACG H LA+ D+ + G N+ +L G G ++ S++ +
Sbjct: 112 PIK-----ALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGEL--GLGTAEDSLLPQK 164
Query: 189 LSVPEHVKNCPIVKLFAEH 207
+ + E + +V AEH
Sbjct: 165 IQIFEEIP-IKMVAAGAEH 182
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANME-PRE 76
P+++ + + CG DH +A ++ G V+SWG G G+LG+ G +++ P
Sbjct: 56 FPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGH---GDHSDLLIPHP 112
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I+AL GL + QI+ G H A T D + +WG N G++G+ D ++ P + E+
Sbjct: 113 IKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLL--PQKIQIFEE 170
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I + VA G+ H++A+ D +L+G GW Y L +G
Sbjct: 171 -----IPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLG 206
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 17/148 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG+ H + ++ G +++ G G GQLG+ + ++ PR+++ALS + Q+S G
Sbjct: 227 VACGWRHTICVSSSGGLYTNGWGKYGQLGH--GDFEDHLVPRKVQALSDKFISQVSGGWR 284
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLD----LVVHDPHPMSWSEDFDSQNIKVVDVAC 149
HS A T G L WGWN GQ+GV D + V+ PH + KV ++C
Sbjct: 285 HSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPH-----------DQKVQMISC 333
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G RHT+A+ + +++ G QL G
Sbjct: 334 GWRHTIAVTERENVYSWGRGANGQLGNG 361
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ D V I+CG+ H +A+T+ V+SWG G+ GQLG + D N+ P I A
Sbjct: 317 PMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGET-IDRNV-PTIIEA 374
Query: 80 LS 81
S
Sbjct: 375 FS 376
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 8/158 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P + D+ + +ACG H LAL++E ++SWG GQLG S + PR
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESA-PRH 183
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I++LSG+ I+AGG HS A T G ++ WG N GQ+G+ + D DP + +
Sbjct: 184 IKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDR--SDP---ALLKS 238
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
SQ K++ + CG HT AL + ++ G Y QL
Sbjct: 239 LRSQ--KIIYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 16/184 (8%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+V P R D F++ V D+ CG H + +G V++ G GQLG+ S +
Sbjct: 19 EEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKS----RKK 74
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++ AL +V +S G H+ A G +++WG GQ+GV D + + S
Sbjct: 75 PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSL 134
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
S+ I++V VACG H+LAL +++++ G N+Y QL +G S + S P
Sbjct: 135 SD------IQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLG------SEKRKESAPR 182
Query: 194 HVKN 197
H+K+
Sbjct: 183 HIKS 186
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
++ ++CG H LAL +G VFSWG+ + GQ+G S D PR I++LS + +VQ++
Sbjct: 85 IIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGV-SIAEDYIRVPRNIKSLSDIQIVQVA 143
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G HS A +++ +Y+WG N GQ+G+ + H S S I +A
Sbjct: 144 CGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLS------GIPFAHIAA 197
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSM 176
G H+ AL +++G G N++ QL +
Sbjct: 198 GGGHSFALTISGAIFGWGRNKFGQLGL 224
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 93.2 bits (230), Expect = 7e-17, Method: Composition-based stats.
Identities = 62/168 (36%), Positives = 85/168 (50%), Gaps = 7/168 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P MD V ACG H L LT++G +++ GN GQLG+ ++ N P+ I A
Sbjct: 27 PREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNL-PNKRPQFISA 85
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V Q+S G HS A T G L++WG N GQ+G + LD+V + M S +
Sbjct: 86 LENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHD--LDMVSYPAPRMIKSIATKT 143
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
VV ++CG H LAL + L+ G NEY QL +G +V T
Sbjct: 144 ----VVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTAT 187
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 24/187 (12%)
Query: 18 HMPSRMDHFL----DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
++P++ F+ + +VT ++CG H LALT G +FSWG+ + GQLG+ D +M
Sbjct: 74 NLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGH-----DLDMV 128
Query: 73 ---EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
PR I++++ VVQIS G H A T G L+AWG N GQ+G+ V
Sbjct: 129 SYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATL 188
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG-----CGVSQVS 184
S + I + +ACG H+ A+ +++G G N + QL + C +Q+
Sbjct: 189 VKSLA------GIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLK 242
Query: 185 VMTRLSV 191
+ L V
Sbjct: 243 TLRSLGV 249
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IACG +H A+++ G +F WG + GQLG + D+ P +++ L LGV IS G
Sbjct: 200 IACGGNHSFAVSKSGAIFGWGKNTFGQLGL--NDLDSRCYPTQLKTLRSLGVRYISCGDD 257
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH--PMSWSEDFDSQNIKVVDVACGS 151
S TQ+G ++ G GQ+G H H + F+ K+ +ACG
Sbjct: 258 FSVFLTQEGGVFTCGLGTFGQLG---------HGTHGNEILPRMVFELMGSKITQIACGR 308
Query: 152 RHTLAL 157
+HTLA
Sbjct: 309 KHTLAF 314
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ G+LG + M PRE+ V Q + GG H+ T+DG LY G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ GQ+G + +L P +S E N V V+CG H+LAL + L+ G N
Sbjct: 63 NDHGQLGHDTN-NLPNKRPQFISALE-----NYIVTQVSCGLSHSLALTNWGQLFSWGSN 116
Query: 170 EYNQL 174
QL
Sbjct: 117 ATGQL 121
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ L V I+CG D + LTQEG VF+ G G+ GQLG+ + G + + PR +
Sbjct: 238 PTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNE--ILPRMVFE 295
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QI+ G H+ A
Sbjct: 296 LMGSKITQIACGRKHTLA 313
>gi|395502432|ref|XP_003755585.1| PREDICTED: RCC1 domain-containing protein 1 [Sarcophilus harrisii]
Length = 357
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 82/177 (46%), Gaps = 32/177 (18%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
DL + G +H L L G V++WG G GQLG+ +A + PR + AL GL + Q
Sbjct: 140 DLKARQLVLGAEHALLLGGMGQVYTWGTGRLGQLGH--GALEAELVPRPVEALLGLAMAQ 197
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVG------------VEGKLDLVVHDPHPMSWSE 135
++AGGWHS ++ G LY WGWN GQ+ V G L P +
Sbjct: 198 VAAGGWHSLCVSEAGDLYIWGWNESGQLALPSRTIAEREKTVAGASGLSSCSPEAKKPAT 257
Query: 136 DFD---SQNI---------------KVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D D +Q I +V+ +CGSRHT + D L+ GW +Y QL
Sbjct: 258 DGDGDLAQFIAIQPFPALLDLPSGSEVIKASCGSRHTAVVTRDGELYTWGWGKYGQL 314
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 68/171 (39%), Gaps = 40/171 (23%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS------------- 65
+P ++ L L + +A G H L +++ G ++ WG GQL PS
Sbjct: 183 VPRPVEALLGLAMAQVAAGGWHSLCVSEAGDLYIWGWNESGQLALPSRTIAEREKTVAGA 242
Query: 66 ------------SGTDANMEPREIRAL----------SGLGVVQISAGGWHSAARTQDGF 103
TD + + + A+ SG V++ S G H+A T+DG
Sbjct: 243 SGLSSCSPEAKKPATDGDGDLAQFIAIQPFPALLDLPSGSEVIKASCGSRHTAVVTRDGE 302
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G + L P + + F + V V CG +T
Sbjct: 303 LYTWGWGKYGQLGHKNTASL--DQPQRVDY---FTDNLLHVEAVICGPWNT 348
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L + +P + D+ + +ACG H LAL++E ++SWG GQLG S
Sbjct: 102 LSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGL-GSEIK 160
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
PR I++L+G+ I+AGG HS A T G ++ WG N GQ+G+ + D
Sbjct: 161 KESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAP--- 217
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + SQ K++ + CG HT AL + ++ G Y QL
Sbjct: 218 --ALLKSLRSQ--KIIHICCGEDHTAALTKEGGVFTFGAGGYGQL 258
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 16/184 (8%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+V P R D F++ V D+ CG H + + +G V++ G GQLG+ S +
Sbjct: 3 EEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS----RKK 58
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++ AL +V +S G H+ A G +++WG GQ+G+ D + P +
Sbjct: 59 PDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYI---RVPRNI 115
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
+D I++V VACG H+LAL ++ ++ G N+Y QL +G S + + S P
Sbjct: 116 KSLYD---IQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLG------SEIKKESAPR 166
Query: 194 HVKN 197
H+K+
Sbjct: 167 HIKS 170
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 217 PALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVN--PRKVFE 274
Query: 80 LSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H+ A G +Y++G GQ+G
Sbjct: 275 LMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGT 313
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 6/152 (3%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P R+ DL + DIA G H ALT EG V+ WG G G+LG+ S + M
Sbjct: 238 TQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKMV 297
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHD 127
P++++ L+G +VQ+S GG HS A T+DG ++++G + G++G K +++ +
Sbjct: 298 PQKVQLLAGEDIVQVSCGGTHSVALTRDGHMFSFGRGDHGRLGYGRKVTTGQPMEVPIDL 357
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
P P S + VACG RHTLA+ +
Sbjct: 358 PPPQDPSGTATEGHWIAKLVACGGRHTLAIVE 389
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 20/187 (10%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G +K +S +P R+ ++ + IA G H LAL ++G +++WGN GQLG +
Sbjct: 186 GDIKQIS----VPVRVQGLENVRL--IAVGAFHNLALQEDGTLWAWGNNEYGQLG--TGD 237
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVV 125
T +P ++ LS L +V I+AGGWHS A T +G +Y WG G++G K +V
Sbjct: 238 TQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKMV 297
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
+ ED +V V+CG H++AL D ++ G ++ +L G +V+
Sbjct: 298 PQKVQLLAGED-------IVQVSCGGTHSVALTRDGHMFSFGRGDHGRLGYG---RKVTT 347
Query: 186 MTRLSVP 192
+ VP
Sbjct: 348 GQPMEVP 354
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 81/197 (41%), Gaps = 50/197 (25%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PREIRALSGLGVVQ 87
+ + G + LA+ +G +F+WG R LG+P+ N P +++ALS + +VQ
Sbjct: 40 IRSVVAGSRNSLAIADDGKLFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQ 99
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD------------------------- 122
+ GGWH A G YAWG N GQ G E +
Sbjct: 100 AAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQ 159
Query: 123 ---------LVVHDPHPMSWSEDFDSQNIKVVDV-------------ACGSRHTLALCDD 160
++ + H +W + + +IK + V A G+ H LAL +D
Sbjct: 160 VAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALQED 219
Query: 161 NSLWGCGWNEYNQLSMG 177
+LW G NEY QL G
Sbjct: 220 GTLWAWGNNEYGQLGTG 236
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 32/138 (23%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPRE----IRALSGLGVVQISAGGWHSAARTQDGFLY 105
+ +WG+G GQLG S+ E +E ++AL + + AG +S A DG L+
Sbjct: 7 IIAWGSGEDGQLGIGSN------EEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLF 60
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN----------IKVVDVACGSRHTL 155
WGWN +G HP + ++N +K+V A G H L
Sbjct: 61 TWGWNQRATLG------------HPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCL 108
Query: 156 ALCDDNSLWGCGWNEYNQ 173
A+ D + G NEY Q
Sbjct: 109 AVDDQGRAYAWGGNEYGQ 126
>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Saimiri boliviensis boliviensis]
Length = 988
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
L ++ P ++ + + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 LKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVQVQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ V+ ++CG HT L D ++ G N QL
Sbjct: 226 KPLSIGA---LKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQL 268
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 7/173 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + L ++CG +H LA+ +G VF+WG GS GQLG + N PR+I
Sbjct: 65 LPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGV-GELKEINFTPRKIT 123
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L+G+ ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 124 TLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQPSPQRVRS 177
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
+ I + VA G H+ AL + +G G N QL++ QV LS+
Sbjct: 178 LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSI 230
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L +V S G SRGQLG G P ++AL L +S G H
Sbjct: 29 ASGERHALLLLTNSLVHSCGENSRGQLG--RRGAPRWDLPEPVQALKTLKFDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+GV G+L + P ++ IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGV-GELKEINFTPRKIT-----TLNGIKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVQVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL LGV+ IS G H+A +QDG ++ +G N+ GQ+G + P P E
Sbjct: 230 IGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CG HT+A
Sbjct: 277 RGPQLVERIDGLVSQIDCGGDHTIA 301
>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1024
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
L ++ P ++ + + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 LKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVQVQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ V+ ++CG HT L D ++ G N QL
Sbjct: 226 KPLSIGA---LKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQL 268
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 7/173 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + L ++CG +H LA+ +G VF+WG GS GQLG + N PR+I
Sbjct: 65 LPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGV-GELKEINFTPRKIT 123
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L+G+ ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 124 TLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQPSPQRVRS 177
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
+ I + VA G H+ AL + +G G N QL++ QV LS+
Sbjct: 178 LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSI 230
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L +V S G SRGQLG G P ++AL L +S G H
Sbjct: 29 ASGERHALLLLTNSLVHSCGENSRGQLG--RRGAPRWDLPEPVQALKTLKFDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+GV G+L + P ++ IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGV-GELKEINFTPRKIT-----TLNGIKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVQVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL LGV+ IS G H+A +QDG ++ +G N+ GQ+G + P P E
Sbjct: 230 IGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CG HT+A
Sbjct: 277 RGPQLVERIDGLVSQIDCGGDHTIA 301
>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Pan troglodytes]
Length = 984
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
++ P ++ + + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGR-NVPVQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ VV ++CG HT L D ++ G N QL
Sbjct: 226 KPLSVGA---LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q +P + L V ++CG +H LA+ +G VF+WG GS GQLG + +
Sbjct: 60 AQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFT 118
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I L+G+ ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 119 PKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASP 172
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 173 QRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLAL 215
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG G P I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLTVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P ++ IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIT-----TLNGIKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL LGVV IS G H+A TQDG ++ +G N GQ+G + P P E
Sbjct: 230 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 277 RGPQLVERIDGLVSQIDCGSYHTLA 301
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 27/176 (15%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F WG SR ++ R G ++Q ++G HS + + + G
Sbjct: 1 MYFCWGTDSR------------ELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCG 48
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N+ GQ+G G + P P+ E + V V+CG H+LA+C ++ G
Sbjct: 49 DNSRGQLGRRGAQRGEL--PEPIQALE-----TLTVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 169 NEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSI 224
QL +G +++ +K I+++ H++S LS KDS +
Sbjct: 102 GSEGQLGIGEFKEISFTPKKITTLNGIK---IIQVSCGHYHSLALS-----KDSQV 149
>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Pan troglodytes]
Length = 1020
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
++ P ++ + + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGR-NVPVQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ VV ++CG HT L D ++ G N QL
Sbjct: 226 KPLSVGA---LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + L V ++CG +H LA+ +G VF+WG GS GQLG + + P++I
Sbjct: 64 ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G+ ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASPQRVR 176
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLAL 215
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG G P I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLTVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P ++ IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIT-----TLNGIKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL LGVV IS G H+A TQDG ++ +G N GQ+G + P P E
Sbjct: 230 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 277 RGPQLVERIDGLVSQIDCGSYHTLA 301
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F WG SR ++ R G ++Q ++G HS + + + G
Sbjct: 1 MYFCWGTDSR------------ELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCG 48
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N+ GQ+G G + P P+ E + V V+CG H+LA+C ++ G
Sbjct: 49 DNSRGQLGRRGAQRGEL--PEPIQALE-----TLTVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 169 NEYNQLSMG 177
QL +G
Sbjct: 102 GSEGQLGIG 110
>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
Length = 1020
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
++ P ++ + + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGR-NVPVQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ VV ++CG HT L D ++ G N QL
Sbjct: 226 KPLSVGA---LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + L V ++CG +H LA+ +G VF+WG GS GQLG + + P++I
Sbjct: 64 ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G+ ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASPQRVR 176
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLAL 215
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG G P I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLTVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P ++ IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIT-----TLNGIKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL LGVV IS G H+A TQDG ++ +G N GQ+G + P P E
Sbjct: 230 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 277 RGPQLVERIDGLVSQIDCGSYHTLA 301
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F WG SR ++ R G ++Q ++G HS + + + G
Sbjct: 1 MYFCWGTDSR------------ELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCG 48
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N+ GQ+G G + P P+ E + V V+CG H+LA+C ++ G
Sbjct: 49 DNSRGQLGRRGAQRGEL--PEPIQALE-----TLTVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 169 NEYNQLSMG 177
QL +G
Sbjct: 102 GSEGQLGIG 110
>gi|347972015|ref|XP_001237544.3| AGAP004495-PA [Anopheles gambiae str. PEST]
gi|333469132|gb|EAU76875.3| AGAP004495-PA [Anopheles gambiae str. PEST]
Length = 283
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 73/128 (57%), Gaps = 6/128 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ + GF+HCL LT G V+SWG G RGQLG N P + L+G+ V+ I+A
Sbjct: 131 IRKVVAGFEHCLMLTTNGDVYSWGGGLRGQLG-NGEIVAVNDRPCVVNGLAGVKVIDIAA 189
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGK--LDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
GWHSAA + G LY WGWNN GQ+G++ + VV P +S+S + D + V V
Sbjct: 190 DGWHSAAVSAFGDLYTWGWNNQGQLGLQDPQHRERVVSLPQLVSFSGEED---LMVEKVH 246
Query: 149 CGSRHTLA 156
CG HT+
Sbjct: 247 CGIGHTVV 254
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T +ACG +A T +++ N + P+ +R + ++ A
Sbjct: 96 ITHLACGECITVACTSTNAIYNIPNLT-------------TTLPKHVR------IRKVVA 136
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H T +G +Y+WG GG G G ++V + P + +KV+D+A
Sbjct: 137 GFEHCLMLTTNGDVYSWG---GGLRGQLGNGEIVAVNDRPCVVN---GLAGVKVIDIAAD 190
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ A+ L+ GWN QL +
Sbjct: 191 GWHSAAVSAFGDLYTWGWNNQGQLGL 216
>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
Length = 538
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 100/192 (52%), Gaps = 17/192 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGL-GVVQI 88
V +ACG H LALT EG VF+WG + GQ+G SGT N PR++ A G V +I
Sbjct: 137 VVKVACGSHHSLALTLEGEVFAWGYNNCGQVG---SGTTTNQATPRKVAACLGTRKVTEI 193
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+GV V+ P+P + Q + VV +
Sbjct: 194 ACGQTSSMALLDNGEVYGWGYNGNGQLGVGNN----VNQPNPCRVAA---LQQMIVVQIV 246
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
CG H +AL D+ S++ G N Y QL G + V+ T++++ + V++ A H+
Sbjct: 247 CGYAHAMALTDEGSVYAWGANSYGQLGTGNKANLVTP-TKIALDKG----RFVEIGATHY 301
Query: 209 NSARLSVPEHAK 220
N ++ + K
Sbjct: 302 NHVSSAITQTGK 313
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P ++D + DI G H L T G ++SWG+ QLG S T+ + P+ I
Sbjct: 72 PRKIDILCKKKIVDIGYGSGPHVLVCTDNGDLYSWGHNGYSQLGNGS--TNQGLSPQLIT 129
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV+++ G HS A T +G ++AWG+NN GQVG + P +
Sbjct: 130 TNLIGRKVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGS----GTTTNQATPRKVAACL 185
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
++ KV ++ACG ++AL D+ ++G G+N QL +G V+Q
Sbjct: 186 GTR--KVTEIACGQTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQ 228
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ ++V I CG+ H +ALT EG V++WG S GQLG +G AN+ A
Sbjct: 231 PCRVAALQQMIVVQIVCGYAHAMALTDEGSVYAWGANSYGQLG---TGNKANLVTPTKIA 287
Query: 80 LSGLGVVQISAGGWH--SAARTQDGFLYAWGWNNGGQV 115
L V+I A ++ S+A TQ G +Y WG G +
Sbjct: 288 LDKGRFVEIGATHYNHVSSAITQTGKVYMWGQCRGQSI 325
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 26/172 (15%)
Query: 35 ACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
AC F + + +TQ+ V++ G+ LG + + +EPR+I L +V I
Sbjct: 31 ACVFGSSGNEAIVITQDDDVYALGSNCSSCLGVGDA--QSGLEPRKIDILCKKKIVDIGY 88
Query: 91 G-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI---KVVD 146
G G H T +G LY+WG N Q+G + S + N+ KVV
Sbjct: 89 GSGPHVLVCTDNGDLYSWGHNGYSQLG---------NGSTNQGLSPQLITTNLIGRKVVK 139
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
VACGS H+LAL + ++ G+N Q+ G +Q + P V C
Sbjct: 140 VACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQAT-------PRKVAAC 184
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VFSWG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D N + P+ I++L+G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLLK-----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLG 172
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 1166
Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 86/172 (50%), Gaps = 10/172 (5%)
Query: 8 GPLKMLSQVF--HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
G L + S+ F PS +V+ DIACG +H + Q G V+S GN ++GQLG
Sbjct: 45 GQLGLASREFGKSCPSPRFTSFSVVIEDIACGEEHTSFIAQNGYVYSMGNNNQGQLGVSV 104
Query: 66 SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
+ P + L G VQIS G +H+A +G L+ WG N GQ+G+ GK D
Sbjct: 105 DESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLFTWGQNCEGQLGI-GKSD--- 160
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
M+ + D +N V V+CG R+T+ + ++G G + QL +G
Sbjct: 161 ----NMTTPQIVDLKNNLAVFVSCGKRNTMVITQTQKIFGFGDGKCGQLGLG 208
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V+ WG+ + GQLG S + + S + + I+ G H++ Q+G++Y+ G
Sbjct: 36 VYVWGSDTYGQLGLASREFGKSCPSPRFTSFS-VVIEDIACGEEHTSFIAQNGYVYSMGN 94
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
NN GQ+GV +D + P + E + K V ++CG+ HT +CD+ L+ G N
Sbjct: 95 NNQGQLGVS--VDESYYKSAP-TLVEGL--KGYKAVQISCGAYHTATVCDNGQLFTWGQN 149
Query: 170 EYNQLSMG 177
QL +G
Sbjct: 150 CEGQLGIG 157
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 18/153 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ-IS 89
+ I+CG H L L +EG FS GN + QLG ++ +N+ P +++ S L V+ I+
Sbjct: 226 IVAISCGDRHTLFLNEEGEAFSCGNNTYNQLGCANNSQSSNI-PVKVKQKSTLKFVKVIA 284
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
A SAA + +G+LY WG GQ + + D ++D+
Sbjct: 285 ANTPMSAALSSEGYLYLWGTGFFGQFDRPTRCEFAPKD----------------LLDICI 328
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
G++ L + ++ G N + +L G Q
Sbjct: 329 GNQFICLLDGEGKVYSWGSNMFGELGQGIANGQ 361
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 8/160 (5%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+ +P + + ++ + CG HC+AL+++G +F WG S GQLG G + + P
Sbjct: 123 EAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGL-GKGEPSTLSP 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +++L G+ + QISAGG HS A + G ++ WG N+ GQ+G+ + D V P + +
Sbjct: 182 QPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAV--PCHIKF- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
SQ KVV ++CG HT AL + L+ G QL
Sbjct: 239 --LRSQ--KVVYISCGEEHTAALTKEGGLFTFGNGSKGQL 274
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
++ ++CG H LA+ ++G VF+WG G GQLG + +A PR I+ L + Q+
Sbjct: 86 ISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGL-GTAEEAVRVPRLIKKLCEHRISQVMC 144
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H A ++DG L+ WG N+ GQ+G+ GK + P P+ I + ++ G
Sbjct: 145 GNHHCIALSKDGQLFVWGENSSGQLGL-GKGEPSTLSPQPLK-----SLCGIPLTQISAG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ AL +++G G N QL +
Sbjct: 199 GDHSFALSFSGAVFGWGKNSAGQLGL 224
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +T I+ G DH AL+ G VF WG S GQLG A P I+
Sbjct: 181 PQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRA--VPCHIKF 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+AA T++G L+ +G + GQ+G D ++P P E +
Sbjct: 239 LRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLG----HDSTRNEPLPRRVMELMGT 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMG 177
+ V +ACG HTLA L + G N QL G
Sbjct: 295 E---VSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG 330
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 10/149 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ACG H L L +G V++ G+ S GQLG+ G+ P + AL + +S
Sbjct: 36 LKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGS----RPELVGALDAQKISGVSC 91
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A + G ++AWG +GGQ+G+ G + V P + + ++ V CG
Sbjct: 92 GQAHSLAVNEQGQVFAWGAGDGGQLGL-GTAEEAVRVPRLIKKLCEH-----RISQVMCG 145
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
+ H +AL D L+ G N QL +G G
Sbjct: 146 NHHCIALSKDGQLFVWGENSSGQLGLGKG 174
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
++ WG+ GQLG +S EPR G G+ +++ G HS DG +Y G
Sbjct: 1 MMLCWGSSGAGQLGIGASEASV-FEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCG 59
Query: 109 WNNGGQVGVEGKLDLVVHDP---HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
N+ GQ+G HD P D+Q K+ V+CG H+LA+ + ++
Sbjct: 60 SNSCGQLG---------HDKGGSRP-ELVGALDAQ--KISGVSCGQAHSLAVNEQGQVFA 107
Query: 166 CGWNEYNQLSMGCGVSQVSV 185
G + QL +G V V
Sbjct: 108 WGAGDGGQLGLGTAEEAVRV 127
>gi|406602412|emb|CCH46028.1| Regulator of chromosome condensation [Wickerhamomyces ciferrii]
Length = 476
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 16/185 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD--ANMEPREI 77
P ++D F + +T +A G DH L L +G+VF+WGNG + QLG S + +EPRE
Sbjct: 206 PVKIDEFKE--ITQLASGKDHILGLDTKGVVFAWGNGQQLQLGRRISERNKLKTLEPREF 263
Query: 78 RALSGLG-VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-SE 135
GL VV IS+G +H A T+DG + WG N GQ GV +L+ D +S +E
Sbjct: 264 ----GLADVVYISSGEFHCFAITKDGKVLTWGLNQYGQCGVSSELE----DGSLISVPTE 315
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
D + K+V +A G HTLAL +D S++ G + +G + T V +
Sbjct: 316 VEDLADKKIVQIAAGEHHTLALSEDGSVYAFG--RIDMFEIGIAKKDLPESTFRDVHGNA 373
Query: 196 KNCPI 200
++ P+
Sbjct: 374 RSVPV 378
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM--EPREIRALSGLGVVQI 88
V I+ G HC A+T++G V +WG GQ G S D ++ P E+ L+ +VQI
Sbjct: 268 VVYISSGEFHCFAITKDGKVLTWGLNQYGQCGVSSELEDGSLISVPTEVEDLADKKIVQI 327
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL---VVHDPHPMSWSEDFDSQ--NI- 142
+AG H+ A ++DG +YA+G + ++G+ K DL D H + S ++ N+
Sbjct: 328 AAGEHHTLALSEDGSVYAFGRIDMFEIGI-AKKDLPESTFRDVHGNARSVPVPTKIPNLP 386
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
K ++A GS H+LA+ +D ++ G+ E + +G V TR+
Sbjct: 387 KTRNIAVGSHHSLAITEDGVVFAWGFGETYAIGLGPAGEDVETPTRIK 434
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 84/215 (39%), Gaps = 32/215 (14%)
Query: 1 MCDHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQ 60
MC+ L GP +V P + D + D A G H LAL + V+SWG G
Sbjct: 58 MCE-LGLGPAAKNKEV-KRPRLNPYLKDKGIVDFAVGGMHTLALDDKNQVWSWGGNDSGV 115
Query: 61 LGYPSSG---------------------TDANMEPREIRAL-SGLGVVQISAGGWHSAAR 98
LG +S +A P + L L VVQ++A SA
Sbjct: 116 LGRDTSKVKEQLKDMDDAGSDDDEDGDLNEAESTPGLVEGLPKDLKVVQLAATDNLSAVL 175
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
++G +YAWG + G+ G + + P+ E F ++ +A G H L L
Sbjct: 176 LENGEVYAWGTFRCNE-GILGFKNDITKQSTPVKIDE-FK----EITQLASGKDHILGLD 229
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
++ W QL +G +S+ + + L E
Sbjct: 230 TKGVVF--AWGNGQQLQLGRRISERNKLKTLEPRE 262
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY------PSSGTD 69
+ +P+ ++ D + IA G H LAL+++G V+++G ++G S+ D
Sbjct: 309 LISVPTEVEDLADKKIVQIAAGEHHTLALSEDGSVYAFGRIDMFEIGIAKKDLPESTFRD 368
Query: 70 ANMEPREIRALSGL----GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
+ R + + + I+ G HS A T+DG ++AWG+ +G+
Sbjct: 369 VHGNARSVPVPTKIPNLPKTRNIAVGSHHSLAITEDGVVFAWGFGETYAIGL 420
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 43 ALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQD 101
A TQ+ +F +G+GS +LG P++ PR L G+V + GG H+ A
Sbjct: 43 AKTQQLDIFVFGSGSMCELGLGPAAKNKEVKRPRLNPYLKDKGIVDFAVGGMHTLALDDK 102
Query: 102 GFLYAWGWNNGGQVG 116
+++WG N+ G +G
Sbjct: 103 NQVWSWGGNDSGVLG 117
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR--ALSGLGVVQISA 90
+IA G H LA+T++G+VF+WG G +G +G D P I+ A + I A
Sbjct: 390 NIAVGSHHSLAITEDGVVFAWGFGETYAIGLGPAGEDVET-PTRIKNTATQDHDIQLIGA 448
Query: 91 GGWHSAA 97
GG S +
Sbjct: 449 GGQFSVS 455
>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
Length = 1031
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L V ++CG +H LA+ +G VF+WG GS GQLG + N+ P++I+
Sbjct: 77 PKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGI-GEFKEINLIPQKIKT 135
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G+ ++Q+S G +HS A ++DG +++WG N+ GQ+G+ +L P S
Sbjct: 136 LTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKEL------PSQASPQRVRSL 189
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + VA G H+ AL + +G G N QL+
Sbjct: 190 DGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAF 226
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 5/156 (3%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + + ++CG H LAL+++G VFSWG+ S GQLG + P+ +R
Sbjct: 129 IPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGL-GKELPSQASPQRVR 187
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+L G+ + Q++AGG HS A + G + WG NN GQ+ G ++ V P S S
Sbjct: 188 SLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGS-NVPVQSYKPRSVSA--- 243
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + VV ++CG HT L + ++ G N QL
Sbjct: 244 LKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQL 279
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L +G V S G+ SRGQLG G +P+ I+AL L V +S G H
Sbjct: 40 ASGERHSLLLLSDGAVHSCGDNSRGQLG--RRGLQREEQPKPIQALETLRVELVSCGKEH 97
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + IK++ V+CG+ H+
Sbjct: 98 SLAVCYKGRVFAWGAGSEGQLGI-GEFKEINLIPQKIK-----TLTGIKIIQVSCGNYHS 151
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL +D ++ G N + QL +G
Sbjct: 152 LALSEDGQVFSWGSNSHGQLGLG 174
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 68/138 (49%), Gaps = 9/138 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA-NMEPREIR 78
P R+ + + +A G H AL+ G F WG+ + GQL + S + +PR +
Sbjct: 183 PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVS 242
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL LGVV IS G H+A TQ+G ++ +G N+ GQ+G + P M E
Sbjct: 243 ALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKT--GPQLMEGIEGLV 300
Query: 139 SQNIKVVDVACGSRHTLA 156
SQ + CGS HTLA
Sbjct: 301 SQ------IDCGSYHTLA 312
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P + L V I+CG +H LTQ G VF++G+ S GQLG+ S T P+ +
Sbjct: 236 YKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGH--SPTAEKTGPQLM 293
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ GL V QI G +H+ A ++Y G
Sbjct: 294 EGIEGL-VSQIDCGSYHTLA-----YVYTTG 318
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G + Q ++G HS DG +++ G N+ GQ+G G P P+ E
Sbjct: 33 GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQR--EEQPKPIQALE-----T 85
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
++V V+CG H+LA+C ++ G QL +G ++++ +P+ +K +
Sbjct: 86 LRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIG-EFKEINL-----IPQKIKTLTGI 139
Query: 202 KL 203
K+
Sbjct: 140 KI 141
>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
Length = 449
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 89/161 (55%), Gaps = 7/161 (4%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ MP++++ + + ++CG H LAL+++G VFSWG+ +GQLG + + P
Sbjct: 112 EISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGL-GNNLCSQASP 170
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK-LDLVVHDPHPMSW 133
+++++L G+ + Q++AGG HS A + G + WG N GQ+ + G ++ PH +
Sbjct: 171 QKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGA 230
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + VV ++CG HT L +D ++ G + QL
Sbjct: 231 LKTLN-----VVYISCGYEHTSVLTEDGQVFTFGGSSSEQL 266
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 7/162 (4%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q P + + + ++CG +H +A+ +G VF+WG GS GQLG S + + P
Sbjct: 59 QSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGES-KEISFMP 117
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+I +L+G+ ++Q+S G +HS A ++DG +++WG N GQ+G+ L P +
Sbjct: 118 TKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNL-CSQASPQKVKSL 176
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
E I + VA G H+ AL + +G G N QL++
Sbjct: 177 E-----GIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLAL 213
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R++ L + A G H L L V+S G+ SRGQLG S + EP I+A
Sbjct: 12 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEP--IQA 69
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LS + + +S G HS A G ++ WG + GQ+G+ G+ + P ++
Sbjct: 70 LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEISFMPTKIN-----SL 123
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV-SQVSVMTRLSVPEHVKN- 197
IK++ V+CG H+LAL +D ++ G N QL +G + SQ S P+ VK+
Sbjct: 124 AGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQAS-------PQKVKSL 176
Query: 198 --CPIVKLFAEHWNSARLSV 215
P+ ++ A +S LS+
Sbjct: 177 EGIPLAQVAAGGTHSFALSL 196
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 28/168 (16%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F+W G R +PR + A +GL +++ ++G HS + +Y+ G
Sbjct: 1 MYFTWAPGRR--------------QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCG 46
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VACGSRHTLALCDDNSLWGCG 167
N+ GQ+G + P E + + +D V+CG H++A+C ++ G
Sbjct: 47 DNSRGQLGQK--------SPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG 98
Query: 168 WNEYNQLSMGCGVSQVSVM-TRLSVPEHVKNCPIVKLFAEHWNSARLS 214
QL +G ++S M T+++ +K I+++ H++S LS
Sbjct: 99 AGSEGQLGIG-ESKEISFMPTKINSLAGIK---IIQVSCGHYHSLALS 142
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D FL+ + D+ CG H + + +G V++ G GQLG+ A P + A
Sbjct: 25 PRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEK----ARKRPEHVGA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG GQ+G+ G + + + S SE
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSE---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats.
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+ +P + ++ + +ACG+ H LAL++ VFSWG GQLG N P
Sbjct: 123 ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQN-SP 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I++L G+ QI+AGG HS T G ++ WG N GQ+G+ +D + +
Sbjct: 182 HVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD-----NDRYVPTLL 236
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV + CG HT AL + ++ G Y QL
Sbjct: 237 KSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
+ ++CG H LAL +G V++WG + GQLG P GT+ + PR I++LS + +VQ++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP--GTEECIRVPRNIKSLSEIQIVQVA 143
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G +HS A ++ +++WG N GQ+G+ G + PH + I +A
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNKYGQLGL-GYEYKKQNSPHVIK-----SLLGIPFAQIAA 197
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSM 176
G H+ L +++G G N++ QL +
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 67.0 bits (162), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + V I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V QI+ G H+ A G +Y++G GQ+G
Sbjct: 289 FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
>gi|327288514|ref|XP_003228971.1| PREDICTED: RCC1 domain-containing protein 1-like [Anolis
carolinensis]
Length = 266
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L + G +H L L + G +FSWG+G GQLG+ + EP+ + AL G+ + ++
Sbjct: 46 LCARRLVLGHEHMLLLDEAGTLFSWGSGRHGQLGH--GDLEDRPEPQAVEALQGVALKEV 103
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK-----------LDLVVHDPHPM-SWSED 136
+AGGWHSA ++ G LY WGWN GQ+G+ K D P D
Sbjct: 104 AAGGWHSATVSEAGDLYLWGWNESGQLGLPSKAASESQGAARDTDGAGDRAQPQGPPGAD 163
Query: 137 FDS-----------QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
F S + + + CGSRHT A+ L+ GW +Y QL G
Sbjct: 164 FISIQAFPALLHLPRGAEALKAGCGSRHTAAVTRTGELYTWGWGQYGQLGHG 215
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 63/159 (39%), Gaps = 33/159 (20%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG----------TD 69
P ++ + + ++A G H +++ G ++ WG GQLG PS TD
Sbjct: 89 PQAVEALQGVALKEVAAGGWHSATVSEAGDLYLWGWNESGQLGLPSKAASESQGAARDTD 148
Query: 70 ANMEPREIRALSGLGVVQISA------------------GGWHSAARTQDGFLYAWGWNN 111
+ + + G + I A G H+AA T+ G LY WGW
Sbjct: 149 GAGDRAQPQGPPGADFISIQAFPALLHLPRGAEALKAGCGSRHTAAVTRTGELYTWGW-- 206
Query: 112 GGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GQ G G D D P + F + + VVDV CG
Sbjct: 207 -GQYGQLGHGDTASSD-RPRRVNH-FVERGLSVVDVTCG 242
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D FL+ + D+ CG H + + +G V++ G GQLG+ A P + A
Sbjct: 25 PRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEK----ARKRPEHVGA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG GQ+G+ G + + + S SE
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSE---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats.
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+ +P + ++ + +ACG+ H LAL++ VFSWG GQLG N P
Sbjct: 123 ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQN-SP 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I++L G+ QI+AGG HS T G ++ WG N GQ+G+ +D + +
Sbjct: 182 HVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD-----NDRYVPTLL 236
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV + CG HT AL + ++ G Y QL
Sbjct: 237 KSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
+ ++CG H LAL +G V++WG + GQLG P GT+ + PR I++LS + +VQ++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP--GTEECIRVPRNIKSLSEIQIVQVA 143
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G +HS A ++ +++WG N GQ+G+ G + PH + I +A
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNKYGQLGL-GYEYKKQNSPHVIK-----SLLGIPFAQIAA 197
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSM 176
G H+ L +++G G N++ QL +
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 67.0 bits (162), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + V I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V QI+ G H+ A G +Y++G GQ+G
Sbjct: 289 FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D FL+ + D+ CG H + + +G V++ G GQLG+ A P + A
Sbjct: 25 PRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEK----ARKRPEHVGA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG GQ+G+ G + + + S SE
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSE---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats.
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+ +P + ++ + +ACG+ H LAL++ VFSWG GQLG N P
Sbjct: 123 ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQN-SP 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I++L G+ QI+AGG HS T G ++ WG N GQ+G+ +D + +
Sbjct: 182 HVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD-----NDRYVPTLL 236
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV + CG HT AL + ++ G Y QL
Sbjct: 237 KSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
+ ++CG H LAL +G V++WG + GQLG P GT+ + PR I++LS + +VQ++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP--GTEECIRVPRNIKSLSEIQIVQVA 143
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G +HS A ++ +++WG N GQ+G+ G + PH + I +A
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNKYGQLGL-GYEYKKQNSPHVIK-----SLLGIPFAQIAA 197
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSM 176
G H+ L +++G G N++ QL +
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 67.0 bits (162), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + V I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V QI+ G H+ A G +Y++G GQ+G
Sbjct: 289 FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 86/157 (54%), Gaps = 5/157 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +D V+T IACG H +ALT+ G V SWG+ GQLG+ +S D P+ +RA
Sbjct: 77 PLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNECGQLGH-ASDQDVVQLPKTVRA 135
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VVQI+ G HS A T G LYAWG N GQ+GV+ +L + PM +
Sbjct: 136 LVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTPSELGQCNA-PMLLTTLL-- 192
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I V +ACG H+ + ++++G G N QL +
Sbjct: 193 -GIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGL 228
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 11/175 (6%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANME 73
V +P + + V IACG +H LALT G +++WG+ GQLG PS N
Sbjct: 126 VVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTPSELGQCNA- 184
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + L G+ V I+ GG HS ++ ++ WG NN GQ+G+ + + +P
Sbjct: 185 PMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE----TNRAYPTQL 240
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG-CGVSQVSVMT 187
+ + V VACG ++ L ++ ++ CG Y QL G CG + M
Sbjct: 241 K---TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNEMLPRMV 292
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS+M D V IACG H L LT G V++ G+ QLG+ S P +I
Sbjct: 27 PSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSK----RPLQIPE 82
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L + QI+ G HS A T+ G + +WG N GQ+G D VV P +
Sbjct: 83 LVDCVITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQD-VVQLPKTVR-----AL 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
+ VV +ACG+ H+LAL L+ G N Y QL GV S + + + P
Sbjct: 137 VSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQL----GVKTPSELGQCNAP 185
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ L V +ACG + + LT EG VF+ G G+ GQLG+ G + M PR +
Sbjct: 237 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNE--MLPRMVME 294
Query: 80 LSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDL 123
L G + Q++ G H+ A G +Y +G + GQ+G L
Sbjct: 295 LMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNTKSL 339
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + V IACG +H +++ VF WG + GQLG A P +++
Sbjct: 185 PMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAY--PTQLKT 242
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L LGV ++ G S T +G ++ G GQ+G H +E
Sbjct: 243 LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG------------HGFCGNEMLPR 290
Query: 140 QNIKVV-----DVACGSRHTLALCDDN-SLWGCGWNEYNQL 174
++++ VACG+RHTLA+ ++G G QL
Sbjct: 291 MVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQL 331
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WGN S GQLG + + P ++ V QI+ G H+ T G +YA G
Sbjct: 3 LYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACGS 62
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ Q+G E + P+ E D + +ACGSRH++AL + + G N
Sbjct: 63 NDYAQLGHE------LSSKRPLQIPELVDC---VITQIACGSRHSMALTEWGQVLSWGDN 113
Query: 170 EYNQL 174
E QL
Sbjct: 114 ECGQL 118
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 9/155 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P + DL + DIA G H ALT EG V+ WG G G+LG+ + + M
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHD 127
P+++ L+G ++Q+S GG HS A T+DG ++++G + G++G K L+L +H
Sbjct: 293 PQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHI 352
Query: 128 PHP---MSWSEDFDSQNIKVVDVACGSRHTLALCD 159
P P + +++ D VACG RHTLA+ +
Sbjct: 353 PPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 16/188 (8%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G +K +S +P R+ ++ + IA G H LAL ++G +++WGN GQLG +
Sbjct: 181 GDIKQIS----VPVRVQGLENVRL--IAVGAFHNLALKEDGTLWAWGNNEYGQLG--TGD 232
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
T P ++ L L +V I+AGGWHS A T +G +Y WG G++G
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
P ++ D ++ V+CG H++AL D ++ G ++ +L G +V+
Sbjct: 293 PQKVNLLAGED-----IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG---RKVTTGQ 344
Query: 188 RLSVPEHV 195
L +P H+
Sbjct: 345 PLELPIHI 352
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 47/206 (22%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ S +D V + G + LA+ +G +F+WG RG LG+P T P +
Sbjct: 27 ELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPE-TKTESTPSLV 85
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD--------------- 122
++L+ + +VQ + GGWH A G YAWG N GQ G E D
Sbjct: 86 KSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKR 145
Query: 123 ------------------LVVHDPHPMSWSEDFDSQNIKVVDV-------------ACGS 151
++ + + +W + + +IK + V A G+
Sbjct: 146 CAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGA 205
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMG 177
H LAL +D +LW G NEY QL G
Sbjct: 206 FHNLALKEDGTLWAWGNNEYGQLGTG 231
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 57/128 (44%), Gaps = 16/128 (12%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
V +WG+G GQLG GTD E + AL V + G +S A DG L+ WG
Sbjct: 7 VIAWGSGEDGQLGL---GTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG 63
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ---NIKVVDVACGSRHTLALCDDNSLWG 165
WN G +G H P + S + N+K+V A G H LA+ D +
Sbjct: 64 WNQRGTLG---------HPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYA 114
Query: 166 CGWNEYNQ 173
G NEY Q
Sbjct: 115 WGGNEYGQ 122
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L + +P + D+ + +ACG H LAL+++ +FSWG GQLG G +
Sbjct: 118 LSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGL---GLE 174
Query: 70 ANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
E PR I++LSG+ I+AGG HS A T G ++ WG N GQ+G+ + D V
Sbjct: 175 IKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVP- 233
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + SQ K++ + CG HT AL + ++ G Y QL
Sbjct: 234 ----ALLKSLRSQ--KIIHICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 16/184 (8%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+V P R D F++ V D+ CG H + + +G V++ G GQLG+ S +
Sbjct: 19 EEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS----RRK 74
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++ AL +V +S G H+ A G +++WG GQ+G+ + + + S
Sbjct: 75 PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSL 134
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
S+ +++V VACG H+LAL D+ ++ G N+Y QL +G + + P
Sbjct: 135 SD------VQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK------KECAPR 182
Query: 194 HVKN 197
H+K+
Sbjct: 183 HIKS 186
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 NVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H+ A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGT 329
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 76/177 (42%), Gaps = 27/177 (15%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR V + G H+ DG +Y G N+
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSE--DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
GQ+G HD + D+Q I V V+CG HTLAL D ++ G
Sbjct: 64 GQLG---------HDKSRRKPEQVGALDAQII--VAVSCGEAHTLALNDKGQVFSWGHAV 112
Query: 171 YNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLSVPEHAKDSSI 224
Y Q+ G+S R VP ++K + IV++ H +S LS KDS I
Sbjct: 113 YGQI----GLSTAEEYIR--VPRNIKSLSDVQIVQVACGHHHSLALS-----KDSDI 158
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ WG + GQ+G+ G + VV +P + F ++N++ DV CGSRHT+ + DD ++
Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDF---FINKNVR--DVGCGSRHTVFVLDDGTV 55
Query: 164 WGCGWNEYNQL 174
+ CG N+ QL
Sbjct: 56 YTCGCNDLGQL 66
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L + +P + D+ + +ACG H LAL+++ +FSWG GQLG G +
Sbjct: 118 LSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGL---GLE 174
Query: 70 ANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
E PR I++LSG+ I+AGG HS A T G ++ WG N GQ+G+ + D V
Sbjct: 175 IKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVP- 233
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + SQ K++ + CG HT AL + ++ G Y QL
Sbjct: 234 ----ALLKSLRSQ--KIIHICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 16/184 (8%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+V P R D F++ V D+ CG H + + +G V++ G GQLG+ S +
Sbjct: 19 EEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS----RRK 74
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++ AL +V +S G H+ A G +++WG GQ+G+ + + + S
Sbjct: 75 PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSL 134
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
S+ +++V VACG H+LAL D+ ++ G N+Y QL +G + + P
Sbjct: 135 SD------VQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK------KECAPR 182
Query: 194 HVKN 197
H+K+
Sbjct: 183 HIKS 186
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 NVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H+ A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 76/177 (42%), Gaps = 27/177 (15%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR V + G H+ DG +Y G N+
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSE--DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
GQ+G HD + D+Q I V V+CG HTLAL D ++ G
Sbjct: 64 GQLG---------HDKSRRKPEQVGALDAQII--VAVSCGEAHTLALNDKGQVFSWGHAV 112
Query: 171 YNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLSVPEHAKDSSI 224
Y Q+ G+S R VP ++K + IV++ H +S LS KDS I
Sbjct: 113 YGQI----GLSTAEEYIR--VPRNIKSLSDVQIVQVACGHHHSLALS-----KDSDI 158
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ WG + GQ+G+ G + VV +P + F ++N++ DV CGSRHT+ + DD ++
Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDF---FINKNVR--DVGCGSRHTVFVLDDGTV 55
Query: 164 WGCGWNEYNQL 174
+ CG N+ QL
Sbjct: 56 YTCGCNDLGQL 66
>gi|345798049|ref|XP_003434392.1| PREDICTED: RCC1 domain-containing protein 1 [Canis lupus
familiaris]
Length = 282
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 81/178 (45%), Gaps = 33/178 (18%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+L + G +H L L + G VFSWG G GQLG+ S +A EPR + AL GL V +
Sbjct: 63 ELRARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGS--LEAEPEPRLLEALQGLPVAE 120
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQV------------------------GVEGKLDL 123
++AGGWHS ++ G +Y WGWN GQ+ G E +
Sbjct: 121 VAAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREASGLNEDGFEVRRTA 180
Query: 124 VVHD--PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D P P + F + VV +CGSRHT + L+ GW +Y QL
Sbjct: 181 KGEDGAPAPFIAIQPFPALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKYGQL 238
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 65/171 (38%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ L V ++A G H + +++ G ++ WG GQL PS D PRE
Sbjct: 107 PRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREA 166
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G VV+ S G H+A T G
Sbjct: 167 SGLNEDGFEVRRTAKGEDGAPAPFIAIQPFPALLDLPLGADVVKASCGSRHTAVVTGTGE 226
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G + L P E F + ++V V+CG +T
Sbjct: 227 LYTWGWGKYGQLGHKDTTSL----DRPCR-VEYFVDKQLQVRAVSCGPWNT 272
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + ++T CG H LALT G V+SWG+ + GQLG + T + PR IR+
Sbjct: 391 PQLLTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVGQLG-QETDTTRQIIPRLIRS 449
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
++ VVQI+AG +H A T G LYAWG N GQ+G+ G + V P +
Sbjct: 450 IAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGL-GMTNEKVSTPTLVQ-----SL 503
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ + +ACG H+ A+ +++G G N + QL +
Sbjct: 504 AGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL 540
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 81/176 (46%), Gaps = 8/176 (4%)
Query: 13 LSQVFHM-PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
L++V M P +MD + ACG H L LT +G ++S GN GQLG+ N
Sbjct: 330 LAKVMVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESL-PN 388
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ + AL + Q G HS A T G +Y+WG N GQ+G E +
Sbjct: 389 KRPQLLTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIR 448
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
S + +VV +A G H LAL + L+ G N Y QL +G +VS T
Sbjct: 449 SIAAK------QVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPT 498
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L M ++ P+ + + + IACG +H A+++ G +F WG + GQLG + +
Sbjct: 487 LGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL--NDLN 544
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ P ++R L LGV +S G S T G ++ G GQ+G + ++ P
Sbjct: 545 SRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEIL--PR 602
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMG 177
+ F+ K+ +ACG RHTLA ++G G + QL +G
Sbjct: 603 MV-----FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIG 646
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 63 YPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD 122
+PS M PR++ + + + + G H+ T DG +Y+ G N+ GQ+G + +
Sbjct: 327 FPSLAKVMVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVE-S 385
Query: 123 LVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
L P ++ E N + CG+ H+LAL + ++ G N QL Q
Sbjct: 386 LPNKRPQLLTALE-----NYIITQACCGTAHSLALTNWGQVYSWGSNAVGQL------GQ 434
Query: 183 VSVMTRLSVPEHVKNCP---IVKLFAEHWNSARLS 214
+ TR +P +++ +V++ A H++ L+
Sbjct: 435 ETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALT 469
>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
++ P ++ + + ++CG H LAL+++ VFSWG S GQLG +
Sbjct: 112 FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL-GKEVPSQA 170
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V P+S
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSNKPLS 229
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L D ++ G N QL
Sbjct: 230 IGA---LKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQL 268
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + L V ++CG +H LA+ +G VF+WG GS GQLG + + P++I
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G+ ++Q+S G +HS A ++D +++WG N+ GQ+G+ ++ P S
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEV------PSQASPQRVR 176
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ I + VA G H+ AL + +G G N QL++
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS 216
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG + EP I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEP--IQALETLNVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P ++ IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIT-----TLNGIKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGV-SQVS 184
LAL D+ ++ G N + QL +G V SQ S
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQAS 171
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL LGV+ IS G H+A QDG ++ +G N+ GQ+G + P P E
Sbjct: 230 IGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 277 RGPQLVERIDGLVSQIDCGSYHTLA 301
>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
Length = 1020
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
++ P ++ + + ++CG H LAL+++ VFSWG S GQLG +
Sbjct: 112 FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL-GKEVPSQA 170
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V P+S
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSNKPLS 229
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L D ++ G N QL
Sbjct: 230 IGA---LKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQL 268
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + L V ++CG +H LA+ +G VF+WG GS GQLG + + P++I
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G+ ++Q+S G +HS A ++D +++WG N+ GQ+G+ ++ P S
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEV------PSQASPQRVR 176
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ I + VA G H+ AL + +G G N QL++
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS 216
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG + EP I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEP--IQALETLNVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P ++ IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIT-----TLNGIKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGV-SQVS 184
LAL D+ ++ G N + QL +G V SQ S
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQAS 171
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL LGV+ IS G H+A QDG ++ +G N+ GQ+G + P P E
Sbjct: 230 IGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 277 RGPQLVERIDGLVSQIDCGSYHTLA 301
>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
++ P ++ + + ++CG H LAL+++ VFSWG S GQLG +
Sbjct: 112 FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL-GKEVPSQA 170
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V P+S
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSNKPLS 229
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L D ++ G N QL
Sbjct: 230 IGA---LKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQL 268
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + L V ++CG +H LA+ +G VF+WG GS GQLG + + P++I
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G+ ++Q+S G +HS A ++D +++WG N+ GQ+G+ ++ P S
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEV------PSQASPQRVR 176
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ I + VA G H+ AL + +G G N QL++
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS 216
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG + EP I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEP--IQALETLNVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P ++ IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIT-----TLNGIKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGV-SQVS 184
LAL D+ ++ G N + QL +G V SQ S
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQAS 171
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL LGV+ IS G H+A QDG ++ +G N+ GQ+G + P P E
Sbjct: 230 IGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 277 RGPQLVERIDGLVSQIDCGSYHTLA 301
>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
Length = 1020
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
++ P ++ + + ++CG H LAL+++ VFSWG S GQLG +
Sbjct: 112 FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL-GKEVPSQA 170
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V P+S
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSNKPLS 229
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L D ++ G N QL
Sbjct: 230 IGA---LKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQL 268
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 85/159 (53%), Gaps = 7/159 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + L V ++CG +H LA+ +G VF+WG GS GQLG + + P++I
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G+ ++Q+S G +HS A ++D +++WG N+ GQ+G+ ++ P S
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEV------PSQASPQRVR 176
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL 215
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG + EP I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEP--IQALETLNVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P ++ IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIT-----TLNGIKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGV-SQVS 184
LAL D+ ++ G N + QL +G V SQ S
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQAS 171
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL LGV+ IS G H+A QDG ++ +G N+ GQ+G + P P E
Sbjct: 230 IGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 277 RGPQLVERIDGLVSQIDCGSYHTLA 301
>gi|355693002|gb|EHH27605.1| RCC1 domain-containing protein 1 [Macaca mulatta]
Length = 376
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 84/179 (46%), Gaps = 35/179 (19%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L + G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 157 ELRARQLELGAEHALLLDEAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLTMA 213
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQV------------------------GVEGKLD 122
+++AGGWHS ++ G +Y WGWN GQ+ G + K
Sbjct: 214 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRT 273
Query: 123 LVVHD--PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V D P P + F + V V+CGSRHT + L+ GW +Y QL
Sbjct: 274 GRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQL 332
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 47/174 (27%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ L + ++A G H + +++ G ++ WG GQL P+ D RE
Sbjct: 201 PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 260
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G V++S G H+A T+ G
Sbjct: 261 TGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGE 320
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS---EDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E D + W E F + ++V V CG +T
Sbjct: 321 LYTWGWGKYGQLGHE--------DTTSLDWPRRVEYFVDKQLQVKAVTCGPWNT 366
>gi|293356015|ref|XP_218819.5| PREDICTED: RCC1 domain-containing protein 1-like [Rattus
norvegicus]
Length = 378
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 81/180 (45%), Gaps = 38/180 (21%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+L V + G +H L L + G VFSWG G GQLG+ S +A +EPR + AL GL + +
Sbjct: 160 ELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGS--LEAELEPRLLEALQGLRMAE 217
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQV------GVEGKL-------------------- 121
++AGGWHS ++ G +Y WGWN GQ+ G E K
Sbjct: 218 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELNDDGLRGEEAAL 277
Query: 122 -------DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ P P S +K +CGSRHT + L+ GW +Y QL
Sbjct: 278 ADVGAPAHFIAIQPFPALLDLPLGSDAVK---ASCGSRHTAVVTRTGELYTWGWGKYGQL 334
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 40/170 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIR 78
P ++ L + ++A G H + +++ G ++ WG GQL P+ SGT+ E
Sbjct: 204 PRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEAT 263
Query: 79 ALS----------------------------------GLGVVQISAGGWHSAARTQDGFL 104
L+ G V+ S G H+A T+ G L
Sbjct: 264 ELNDDGLRGEEAALADVGAPAHFIAIQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGEL 323
Query: 105 YAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
Y WGW GQ+G + D D P E F + ++V V CG +T
Sbjct: 324 YTWGWGKYGQLGHK---DSTSSD-QPCR-VEYFVERQLEVRAVTCGPWNT 368
>gi|47682199|gb|AAH69844.1| Rccd1 protein [Mus musculus]
Length = 377
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 31/176 (17%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+L V + G +H L L G VFSWG G GQLG+ + +A +EPR + AL GL + +
Sbjct: 160 ELRVRQLELGAEHVLLLCTAGQVFSWGAGRHGQLGHGT--LEAELEPRLLEALQGLRMAK 217
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK--LDLVVHDPHPMSWSEDFDSQNIKVV 145
++AGGWHS ++ G +Y WGWN GQ+ + + + +ED + + V
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTEKKAEREEATELNEDGLKEELAVA 277
Query: 146 D---------------------------VACGSRHTLALCDDNSLWGCGWNEYNQL 174
D +CGSRHT + L+ GW +Y QL
Sbjct: 278 DAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQL 333
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 64/169 (37%), Gaps = 39/169 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIR 78
P ++ L + +A G H + L++ G ++ WG GQL P+ SGT+ E E
Sbjct: 204 PRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTEKKAEREEAT 263
Query: 79 ALS---------------------------------GLGVVQISAGGWHSAARTQDGFLY 105
L+ G V S G H+A T+ G LY
Sbjct: 264 ELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELY 323
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
WGW GQ+G + L P E F + ++V V CG +T
Sbjct: 324 TWGWGKYGQLGHKDSTSL----DRPCC-VEYFVERQLEVRAVTCGPWNT 367
>gi|307168816|gb|EFN61765.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 538
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 10/148 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQIS 89
+ D+ACG H LALT+EG V++WG + GQ+G S+ + PR++ + L+G +V IS
Sbjct: 137 IVDVACGSHHSLALTEEGEVYAWGQNNCGQVG--SNISTNQGSPRQVTSNLAGKKIVHIS 194
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G S T +G +Y WG+N GQ+G+ ++ M+ S + ++ VAC
Sbjct: 195 CGQTSSMVVTDNGEVYGWGYNGVGQLGIGNYVN-------QMTPSRVGSLIGVVIIKVAC 247
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G HTLAL D+ L+ G N Y QL +G
Sbjct: 248 GYAHTLALSDEGKLYVWGGNSYGQLGIG 275
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P +++ D + ACG H LALT++G V+SWG+ S +LG + I
Sbjct: 67 PKKIEVLCDKDIKTFACGSGPHVLALTEKGEVYSWGHNSYCELGNGTCNQGLTPILVNIP 126
Query: 79 AL-SGLG---VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
L +GL +V ++ G HS A T++G +YAWG NN GQVG ++ + P +
Sbjct: 127 TLGAGLNMKCIVDVACGSHHSLALTEEGEVYAWGQNNCGQVGS----NISTNQGSPRQVT 182
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ + K+V ++CG ++ + D+ ++G G+N QL +G V+Q++
Sbjct: 183 SNLAGK--KIVHISCGQTSSMVVTDNGEVYGWGYNGVGQLGIGNYVNQMT 230
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQIS 89
+ I+CG + +T G V+ WG GQLG G N M P + +L G+ +++++
Sbjct: 190 IVHISCGQTSSMVVTDNGEVYGWGYNGVGQLGI---GNYVNQMTPSRVGSLIGVVIIKVA 246
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-----LVVHD 127
G H+ A + +G LY WG N+ GQ+G+ K + LV H+
Sbjct: 247 CGYAHTLALSDEGKLYVWGGNSYGQLGIGNKTNACNPVLVTHE 289
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 14/150 (9%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG-GWHSAA 97
+ L + ++ V+ GN G LG S + + P++I L + + G G H A
Sbjct: 34 NEALLVMKDKSVYGLGNNIAGCLGI--SDAHSTLYPKKIEVLCDKDIKTFACGSGPHVLA 91
Query: 98 RTQDGFLYAWGWNNGGQVGV----EGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSR 152
T+ G +Y+WG N+ ++G +G ++V+ P + N+K +VDVACGS
Sbjct: 92 LTEKGEVYSWGHNSYCELGNGTCNQGLTPILVNIPTLGA------GLNMKCIVDVACGSH 145
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
H+LAL ++ ++ G N Q+ +Q
Sbjct: 146 HSLALTEEGEVYAWGQNNCGQVGSNISTNQ 175
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN--MEPREI 77
PSR+ + +V+ +ACG+ H LAL+ EG ++ WG S GQLG + N + E+
Sbjct: 231 PSRVGSLIGVVIIKVACGYAHTLALSDEGKLYVWGGNSYGQLGIGNKTNACNPVLVTHEM 290
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+S + + + S A G +Y WG
Sbjct: 291 GRISDIAALHYNH---ISTAVGVGGRVYMWG 318
>gi|21750989|dbj|BAC03879.1| unnamed protein product [Homo sapiens]
Length = 184
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 13/151 (8%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGL 83
D+ + ++CG H LAL+++ VFSWG S GQLG +PS + P+ +R+L G+
Sbjct: 5 DIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS-----PQRVRSLEGI 59
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
+ Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V P+S +N+
Sbjct: 60 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSNKPLSVGA---LKNLG 115
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
VV ++CG HT L D ++ G N QL
Sbjct: 116 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 146
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 50 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 107
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+ AL LGVV IS G H+A TQDG ++ +G N GQ+G
Sbjct: 108 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 147
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L+ + ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 2 TLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASPQRVRS 55
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 56 LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL 93
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + +L V I+CG H LTQ+G VF++G+ GQLGY S T P+ +
Sbjct: 105 PLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY--SPTPEKRGPQLVER 162
Query: 80 LSGLGVVQISAG 91
+ GL V QI G
Sbjct: 163 IDGL-VSQIDCG 173
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+IK++ V+CG H+LAL D+ ++ G N + QL +G
Sbjct: 5 DIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG 41
>gi|296134345|ref|YP_003641592.1| Ig domain-containing protein group 2 domain-containing protein
[Thermincola potens JR]
gi|296032923|gb|ADG83691.1| Ig domain protein group 2 domain protein [Thermincola potens JR]
Length = 4140
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 62/159 (38%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +A G +H + L +G V++WGN GQLG S P +I + VV+I A
Sbjct: 2547 VKAVAAGANHTVVLKTDGTVWAWGNNMYGQLGTSPSVLAKTYSPVQIPGIDS--VVEIGA 2604
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G WH+ AR DG ++AWG N GQVG G VV P +S V VA G
Sbjct: 2605 GIWHTLARRADGTVWAWGRNIEGQVG-NGSASAVVDSPAQVSGLTG-------VTKVAAG 2656
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGV-SQVSVMTR 188
H LAL D ++W G N+ QL G V S V V TR
Sbjct: 2657 GYHNLALRSDGTVWAWGRNDKGQLGTGNTVSSNVPVQTR 2695
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 22 RMDHFLD---LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
RMD F + + G + LAL +G V++WG +GQLG + + P ++
Sbjct: 2433 RMDIFANTPAFTAAAVYSGTGYSLALKPDGTVWAWGINDQGQLGNGGQDLNPHKNPEQVP 2492
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L+G V ++ GG+H A DG ++ WG N+ GQ+G +G +++ F
Sbjct: 2493 GLTG--VTALAPGGYHVVALKNDGTVWTWGKNDSGQLG-DG------------TYTSRFS 2537
Query: 139 SQNIK----VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
+ V VA G+ HT+ L D ++W G N Y QL + SV+ + P
Sbjct: 2538 PGQVPGLTGVKAVAAGANHTVVLKTDGTVWAWGNNMYGQLG-----TSPSVLAKTYSPVQ 2592
Query: 195 VKNC-PIVKLFAEHWNS 210
+ +V++ A W++
Sbjct: 2593 IPGIDSVVEIGAGIWHT 2609
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVVQIS 89
VT +A G H +AL +G V++WG GQLG GT + P ++ L+G V ++
Sbjct: 2497 VTALAPGGYHVVALKNDGTVWTWGKNDSGQLG---DGTYTSRFSPGQVPGLTG--VKAVA 2551
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG H+ DG ++AWG N GQ+G + + P + DS VV++
Sbjct: 2552 AGANHTVVLKTDGTVWAWGNNMYGQLGTSPSVLAKTYSPVQIP---GIDS----VVEIGA 2604
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G HTLA D ++W G N Q+ G + V ++S
Sbjct: 2605 GIWHTLARRADGTVWAWGRNIEGQVGNGSASAVVDSPAQVS 2645
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 15/94 (15%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLG---------YPSSGTDANMEPREIRALSG 82
TDIA G DH +A+ + + WG GQLG YP +A+ P LSG
Sbjct: 1951 TDIAAGTDHSMAVRGDSALVGWGANDDGQLGDGHFGEPVPYPVLVRNADGTPWN-PVLSG 2009
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+ S G H+A DG +++WG N GQ+G
Sbjct: 2010 M-----SPGSTHTAVLGSDGSVWSWGNNAFGQLG 2038
Score = 44.7 bits (104), Expect = 0.033, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP-MSWSEDFDSQNIKVVD 146
I+AG HS A D L WG N+ GQ+G +G V P+P + + D N +
Sbjct: 1953 IAAGTDHSMAVRGDSALVGWGANDDGQLG-DGHFGEPV--PYPVLVRNADGTPWNPVLSG 2009
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ GS HT L D S+W G N + QL G
Sbjct: 2010 MSPGSTHTAVLGSDGSVWSWGNNAFGQLGNG 2040
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P + DL + DIA G H ALT EG V+ WG G G+LG+ + + M
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHD 127
P+++ L G ++Q+S GG HS A T+DG ++++G + G++G K L+L +H
Sbjct: 293 PQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHI 352
Query: 128 PHP---MSWSEDFDSQNIKVVDVACGSRHTLALCD 159
P P + +++ D VACG RHTLA+ +
Sbjct: 353 PPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 16/188 (8%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G +K +S +P R+ ++ + IA G H LAL ++G +++WGN GQLG +
Sbjct: 181 GDIKQIS----VPVRVQGLENVRL--IAVGAFHNLALKEDGTLWAWGNNEYGQLG--TGD 232
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
T P ++ L L +V I+AGGWHS A T +G +Y WG G++G
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
P ++ D ++ V+CG H++AL D ++ G ++ +L G +V+
Sbjct: 293 PQKVNLLPGED-----IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG---RKVTTGQ 344
Query: 188 RLSVPEHV 195
L +P H+
Sbjct: 345 PLELPIHI 352
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 83/206 (40%), Gaps = 47/206 (22%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ S +D V + G + LA+ +G +F+WG RG LG+P T P +
Sbjct: 27 ELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPE-TKTESTPSLV 85
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD--------------- 122
++L+ + +VQ + G WH A G YAWG N GQ G E D
Sbjct: 86 KSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKR 145
Query: 123 ------------------LVVHDPHPMSWSEDFDSQNIKVVDV-------------ACGS 151
++ + + +W + + +IK + V A G+
Sbjct: 146 CAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGA 205
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMG 177
H LAL +D +LW G NEY QL G
Sbjct: 206 FHNLALKEDGTLWAWGNNEYGQLGTG 231
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
V +WG+G GQLG GTD E + AL V + G +S A DG L+ WG
Sbjct: 7 VIAWGSGEDGQLGL---GTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG 63
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ---NIKVVDVACGSRHTLALCDDNSLWG 165
WN G +G H P + S + N+K+V A G+ H LA+ D +
Sbjct: 64 WNQRGTLG---------HPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYA 114
Query: 166 CGWNEYNQ 173
G NEY Q
Sbjct: 115 WGGNEYGQ 122
>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
Length = 1034
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++ MP++++ + + ++CG H LAL+++G VFSWG+ +GQLG + +
Sbjct: 118 KEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGL-GNNLCSQAS 176
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK-LDLVVHDPHPMS 132
P+++++L G+ + Q++AGG HS A + G + WG N GQ+ + G ++ PH +
Sbjct: 177 PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIG 236
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + VV ++CG HT L +D ++ G + QL
Sbjct: 237 -----ALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL 273
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++CG +H +A+ +G VF+WG GS GQLG S + M P +I +L+G+ ++Q+S G +
Sbjct: 85 VSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFM-PTKINSLAGIKIIQVSCGHY 143
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A ++DG +++WG N GQ+G+ L P + E I + VA G H
Sbjct: 144 HSLALSEDGQVFSWGSNRQGQLGLGNNL-CSQASPQKVKSLE-----GIPLAQVAAGGTH 197
Query: 154 TLALCDDNSLWGCGWNEYNQLSM 176
+ AL + +G G N QL++
Sbjct: 198 SFALSLMGTSFGWGNNRSGQLAL 220
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R++ L + A G H L L V+S G+ SRGQLG S + EP I+A
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEP--IQA 76
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LS + + +S G HS A G ++ WG + GQ+G+ G+ + P ++
Sbjct: 77 LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEISFMPTKIN-----SL 130
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
IK++ V+CG H+LAL +D ++ G N QL +G
Sbjct: 131 AGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLG 168
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 28/169 (16%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G+ F+W G R +PR + A +GL +++ ++G HS + +Y+
Sbjct: 7 GMYFTWAPGRR--------------QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSC 52
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VACGSRHTLALCDDNSLWGC 166
G N+ GQ+G + P E + + +D V+CG H++A+C ++
Sbjct: 53 GDNSRGQLGQKS--------PQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTW 104
Query: 167 GWNEYNQLSMGCGVSQVSVM-TRLSVPEHVKNCPIVKLFAEHWNSARLS 214
G QL +G ++S M T+++ +K I+++ H++S LS
Sbjct: 105 GAGSEGQLGIGES-KEISFMPTKINSLAGIK---IIQVSCGHYHSLALS 149
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD--ANMEPREIRALSGLGVVQ 87
++ IACG H LALT G ++SWG+ S GQLG G D M+P+ I L+G+ +
Sbjct: 186 IIVQIACGMKHALALTNNGELYSWGSNSEGQLGL---GVDIRCEMKPKLINTLAGVPIAF 242
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
I+ GG+HS A ++ G ++ WG N GQ+G+ + + P+ + +N KV
Sbjct: 243 IACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNL--PYQLQ-----TLRNAKVCYA 295
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
ACG ++ L D ++ CG Y QL G +++
Sbjct: 296 ACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEI 331
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 11/150 (7%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V ACG H +A+ + G +FSWG+ S GQLG +S PR ++ L +VQI
Sbjct: 132 FVFKKAACGAYHTIAVNEWGQLFSWGSNSEGQLGL-NSKNFMECSPRMVKTLGTSIIVQI 190
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQ--VGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
+ G H+ A T +G LY+WG N+ GQ +GV+ + ++ + ++ + +
Sbjct: 191 ACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLA--------GVPIAF 242
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ACG H++A+ +++G G N + QL +
Sbjct: 243 IACGGYHSIAISKSGAIFGWGKNTFGQLGL 272
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ +P +D + IACG ++ + +T +G ++S GN GQLG+ +
Sbjct: 68 EIILVPCEVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRKRLQL-- 125
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I L + + G +H+ A + G L++WG N+ GQ+G+ K + + P +
Sbjct: 126 --ILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSK-NFMECSPRMVK-- 180
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+V +ACG +H LAL ++ L+ G N QL +G +
Sbjct: 181 ---TLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDI 223
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q ++P ++ + V ACG + + LT +G VF+ G G GQLG+ S+ + +
Sbjct: 275 TQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNE--IL 332
Query: 74 PREIRALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
PR++ L G V QIS G H+ A G +YAWG GQ+G
Sbjct: 333 PRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 376
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + + IACG H +A+++ G +F WG + GQLG + T P +++
Sbjct: 229 PKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGL--NDTQNRNLPYQLQT 286
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V + G S T DG ++ G GQ+G + ++ P E S
Sbjct: 287 LRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEIL----PRQVMELMGS 342
Query: 140 QNIKVVDVACGSRHTLALCDDNS---LWGCG 167
V ++CG RHTLAL WG G
Sbjct: 343 ---TVTQISCGKRHTLALVPSQGRVYAWGLG 370
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALT-QEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++ + VT I+CG H LAL +G V++WG G GQLG ++ T + P+ +
Sbjct: 332 LPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG--NNSTRSTTTPQVV 389
Query: 78 R 78
R
Sbjct: 390 R 390
>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1185
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++ MP++++ + + ++CG H LAL+++G VFSWG+ +GQLG + +
Sbjct: 269 KEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGL-GNNLCSQAS 327
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK-LDLVVHDPHPMS 132
P+++++L G+ + Q++AGG HS A + G + WG N GQ+ + G ++ PH +
Sbjct: 328 PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIG 387
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + VV ++CG HT L +D ++ G + QL
Sbjct: 388 -----ALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL 424
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++CG +H +A+ +G VF+WG GS GQLG S + M P +I +L+G+ ++Q+S G +
Sbjct: 236 VSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFM-PTKINSLAGIKIIQVSCGHY 294
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A ++DG +++WG N GQ+G+ L P + E I + VA G H
Sbjct: 295 HSLALSEDGQVFSWGSNRQGQLGLGNNL-CSQASPQKVKSLE-----GIPLAQVAAGGTH 348
Query: 154 TLALCDDNSLWGCGWNEYNQLSM 176
+ AL + +G G N QL++
Sbjct: 349 SFALSLMGTSFGWGNNRSGQLAL 371
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R++ L + A G H L L V+S G+ SRGQLG S + EP I+A
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEP--IQA 227
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LS + + +S G HS A G ++ WG + GQ+G+ G+ + P ++
Sbjct: 228 LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEISFMPTKIN-----SL 281
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
IK++ V+CG H+LAL +D ++ G N QL +G
Sbjct: 282 AGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLG 319
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 28/169 (16%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G+ F+W G R +PR + A +GL +++ ++G HS + +Y+
Sbjct: 158 GMYFTWAPGRR--------------QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSC 203
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VACGSRHTLALCDDNSLWGC 166
G N+ GQ+G + P E + + +D V+CG H++A+C ++
Sbjct: 204 GDNSRGQLGQKS--------PQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTW 255
Query: 167 GWNEYNQLSMGCGVSQVSVM-TRLSVPEHVKNCPIVKLFAEHWNSARLS 214
G QL +G ++S M T+++ +K I+++ H++S LS
Sbjct: 256 GAGSEGQLGIGES-KEISFMPTKINSLAGIK---IIQVSCGHYHSLALS 300
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V ++ G H+ A G +YAWG ++ GQ+G++G + + + S S+
Sbjct: 81 LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG G D +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GIDCQKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V Q++ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR V + G H+ DG +Y G N+
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V VACG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVACGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGLQ-GSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V ++ G H+ A G +YAWG ++ GQ+G++G + + + S S+
Sbjct: 81 LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG G D +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GIDCQKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V Q + G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR V + G H+ DG +Y G N+
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V VACG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVACGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGLQ-GSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 34 PRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 89
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V ++ G H+ A G +YAWG ++ GQ+G++G + + + S S+
Sbjct: 90 LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD---- 145
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 146 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 181
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG G D +
Sbjct: 131 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GIDCQKQ 187
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 188 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 245
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 246 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 283
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 240 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 297
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V Q++ G H++A G +Y++G GQ+G
Sbjct: 298 FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 338
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR V + G H+ DG +Y G N+
Sbjct: 13 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 72
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V VACG HTLAL D ++ G +
Sbjct: 73 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVACGEAHTLALNDKGQVYAWGLD 120
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 121 SDGQLGLQ-GSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 162
>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 61/220 (27%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H+P RM+ F D + D++CG DH A++++G V++WG G GQLG+ +GT+ ++P+E+
Sbjct: 181 HLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGH--NGTEDELKPKEL 238
Query: 78 RALSGLG--------------------------------------------------VVQ 87
+ G G V +
Sbjct: 239 TVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPLDNVKE 298
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++AGG H A T+DG ++WGW G++G D + +P P + VV V
Sbjct: 299 VAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTL------GPAVGVVSV 352
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
+ G H+LAL + ++G G+N +L +G ++ SVMT
Sbjct: 353 SAGGGHSLALTESGQVYGWGFNASGRLGLG---NESSVMT 389
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 82/215 (38%), Gaps = 50/215 (23%)
Query: 9 PLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
P++ ++++ P+ + L + I G H +AL++ G V+ WGN GQ G +
Sbjct: 121 PMRRDKRIYY-PTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLGNK-- 177
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
+A P + +V +S G HSAA ++DG ++ WG+ GQ+G G D +
Sbjct: 178 EAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKE 237
Query: 129 HPMSWSE---------DFDS------------------------------------QNIK 143
+ E DF N+K
Sbjct: 238 LTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPLDNVK 297
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
+VA G H LAL D W GW E +L G
Sbjct: 298 --EVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGA 330
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 8/142 (5%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGG 92
D A G+ LT ++ WG+ L P P LG+V+I G
Sbjct: 91 DAAAGWTQNFLLTTRHELYYWGSSGVYAL-LPMRRDKRIYYPTLCEPAQSLGIVKIRTGR 149
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H A +++G +Y WG + GQ G+ K H P M + D +VDV+CG
Sbjct: 150 QHGIALSKNGEVYIWGNSEFGQTGLGNK--EAQHLPIRMEFFRDKS-----IVDVSCGLD 202
Query: 153 HTLALCDDNSLWGCGWNEYNQL 174
H+ A+ D +W G+ QL
Sbjct: 203 HSAAVSKDGRVWTWGYGIDGQL 224
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V ++ G H+ A G +YAWG ++ GQ+G++G + + + S S+
Sbjct: 81 LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG G D +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GIDCQKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V Q++ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR V + G H+ DG +Y G N+
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V VACG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVACGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGLQ-GSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 12/156 (7%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD--ANMEPREIRALSGLGVVQ 87
++ +ACG H LALT G ++SWG+ S GQLG G D + ++P+ I L+G+ +
Sbjct: 170 IIVQVACGMKHALALTNNGELYSWGSNSEGQLGL---GVDIRSEVKPKLINTLAGVPIAF 226
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
I+ GG+HS A ++ G ++ WG N GQ+G+ + + PH + +N K+
Sbjct: 227 IACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNL--PHQLQ-----TLRNAKICYA 279
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
ACG ++ L D ++ CG Y QL G +++
Sbjct: 280 ACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEI 315
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 7/148 (4%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG H +A+ + G +FSWG+ S GQLG +S PR ++ L +VQ+
Sbjct: 116 FVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQLGL-NSKNFMECSPRMVKTLGTSIIVQV 174
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G H+ A T +G LY+WG N+ GQ+G+ + V + + + + +A
Sbjct: 175 ACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLA------GVPIAFIA 228
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSM 176
CG H++A+ +++G G N + QL +
Sbjct: 229 CGGYHSIAISKSGAIFGWGKNTFGQLGL 256
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 10/166 (6%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ +P ++D + IACG ++ + +T +G ++S GN GQLG+ +
Sbjct: 52 EIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHERGRKRLQL-- 109
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I L +++ G +H+ A + G L++WG N+ GQ+G+ K + + P +
Sbjct: 110 --ILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSK-NFMECSPRMVK-- 164
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+V VACG +H LAL ++ L+ G N QL +G +
Sbjct: 165 ---TLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDI 207
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q ++P ++ + + ACG + + LT +G VF+ G G GQLG+ S+ + +
Sbjct: 259 TQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNE--IL 316
Query: 74 PREIRALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDL----VVHDP 128
PR++ L G V QIS G H+ A G +YAWG GQ+G + VVH P
Sbjct: 317 PRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTPQVVHGP 376
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + + IACG H +A+++ G +F WG + GQLG + T P +++
Sbjct: 213 PKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGL--NDTQNRNLPHQLQT 270
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L + + G S T DG ++ G GQ+G + ++ P E S
Sbjct: 271 LRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEIL----PRQVMELMGS 326
Query: 140 QNIKVVDVACGSRHTLALCDDNS---LWGCG 167
V ++CG RHTLAL WG G
Sbjct: 327 ---TVTQISCGKRHTLALVPSQGRVYAWGLG 354
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
+ G ++ WG G++G+ G D ++ P + + + + Q I ACG +T+ +
Sbjct: 29 KKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQI-----ACGENYTVVITH 83
Query: 160 DNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
D ++ CG N+Y QL G ++ ++ L
Sbjct: 84 DGKIYSCGNNDYGQLGHERGRKRLQLILGL 113
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V ++ G H+ A G +YAWG ++ GQ+G++G + + + S S+
Sbjct: 81 LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG G D +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GIDCQKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V Q++ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR V + G H+ DG +Y G N+
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V VACG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVACGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGLQ-GSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V ++ G H+ A G +YAWG ++ GQ+G++G + + + S S+
Sbjct: 81 LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG G D +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GIDCQKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V Q++ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR V + G H+ DG +Y G N+
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V VACG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVACGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGLQ-GSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1149
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++ MP++++ + + ++CG H LAL+++G VFSWG+ +GQLG + +
Sbjct: 269 KEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGL-GNNLCSQAS 327
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK-LDLVVHDPHPMS 132
P+++++L G+ + Q++AGG HS A + G + WG N GQ+ + G ++ PH +
Sbjct: 328 PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIG 387
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + VV ++CG HT L +D ++ G + QL
Sbjct: 388 -----ALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL 424
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++CG +H +A+ +G VF+WG GS GQLG S + M P +I +L+G+ ++Q+S G +
Sbjct: 236 VSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFM-PTKINSLAGIKIIQVSCGHY 294
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A ++DG +++WG N GQ+G+ L P + E I + VA G H
Sbjct: 295 HSLALSEDGQVFSWGSNRQGQLGLGNNL-CSQASPQKVKSLE-----GIPLAQVAAGGTH 348
Query: 154 TLALCDDNSLWGCGWNEYNQLSM 176
+ AL + +G G N QL++
Sbjct: 349 SFALSLMGTSFGWGNNRSGQLAL 371
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R++ L + A G H L L V+S G+ SRGQLG S + EP I+A
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEP--IQA 227
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LS + + +S G HS A G ++ WG + GQ+G+ G+ + P ++
Sbjct: 228 LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEISFMPTKIN-----SL 281
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
IK++ V+CG H+LAL +D ++ G N QL +G
Sbjct: 282 AGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLG 319
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 28/169 (16%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G+ F+W G R +PR + A +GL +++ ++G HS + +Y+
Sbjct: 158 GMYFTWAPGRR--------------QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSC 203
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VACGSRHTLALCDDNSLWGC 166
G N+ GQ+G + P E + + +D V+CG H++A+C ++
Sbjct: 204 GDNSRGQLGQKS--------PQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTW 255
Query: 167 GWNEYNQLSMGCGVSQVSVM-TRLSVPEHVKNCPIVKLFAEHWNSARLS 214
G QL +G ++S M T+++ +K I+++ H++S LS
Sbjct: 256 GAGSEGQLGIGES-KEISFMPTKINSLAGIK---IIQVSCGHYHSLALS 300
>gi|296475513|tpg|DAA17628.1| TPA: CG6678-like [Bos taurus]
Length = 377
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 9 PLKMLSQVFHMPSRMDHFLDLVVT----DIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
PL ++ + P R + L T + G +H L L G VFSWG G GQLG+
Sbjct: 136 PLLPCARAYVSP-RPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGH- 193
Query: 65 SSGT-DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV-------- 115
GT +A EPR + AL GL + +++AGGWHS ++ G +Y WGWN GQ+
Sbjct: 194 --GTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLA 251
Query: 116 ----------------GVEGKLDLVVHD--PHPMSWSEDFD-----SQNIKVVDVACGSR 152
G E K D P P + F S + V V+CGSR
Sbjct: 252 EDGKTTAGEASGLEEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSR 311
Query: 153 HTLALCDDNSLWGCGWNEYNQL 174
HT L L+ GW +Y QL
Sbjct: 312 HTAVLTRTGELYTWGWGKYGQL 333
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 68/171 (39%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP--------------- 64
P ++ L + ++A G H + L++ G ++ WG GQL P
Sbjct: 202 PRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAGEA 261
Query: 65 -------------SSGTDANMEP----REIRAL----SGLGVVQISAGGWHSAARTQDGF 103
S+G D P + AL G V++S G H+A T+ G
Sbjct: 262 SGLEEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGE 321
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G + D D P E F + ++V V+CG +T
Sbjct: 322 LYTWGWGKYGQLGHK---DTTTLD-RPCR-VEYFVDKQLQVRTVSCGPWNT 367
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 20/176 (11%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
H+A P P + + + +ACG HCLALT+E V++WG+G G G
Sbjct: 1679 HMAPAP---------TPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGV 1729
Query: 64 PSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
S T+ +EP+E+ +L+ ++ + AGG+HSAA +Q G L+ WG N+ GQ+G+ G
Sbjct: 1730 --SNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGL-GTTSA 1786
Query: 124 VVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS--LWGCGWNEYNQLSMG 177
P +S + D V+DV+ G+ H+ L S L+ CG N QL +G
Sbjct: 1787 AEDSPTKIS---NLDG---VVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLG 1836
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R++ + V IACG D ALT G V++WG ++G+LG S A + P+ ++
Sbjct: 544 PKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQD 603
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LS V QIS G H+A T + WG N GQ+G+ + + DP+ ++
Sbjct: 604 LSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIP-HISSYMPDPYEIT---SLRE 659
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
NI+ +ACG HTL + S+ CG + QL G +T LS K P
Sbjct: 660 ANIR--SIACGGWHTLISTNTGSVMSCGKGWHGQLGHG----DYESLTALS-----KTLP 708
Query: 200 IVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGILV 238
K E + DS IVK+ AG +S +
Sbjct: 709 YFKKIVEGFG-----------DSFIVKVSAGKESSAAIT 736
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
+ IA G+ H LAL G +FSWG+GS G+LG G+DAN E PR + +L VV I+
Sbjct: 190 IVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGI---GSDANAESPRFVASLQNSKVVHIA 246
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK--VVDV 147
G H+AA T G ++ WG GQ+G H +S ++ K +
Sbjct: 247 CGAHHTAAITTVGDVWTWGKGLRGQLG---------HKSVKEEFSPRLNASLRKCGAQKI 297
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
CG HTL + L+ G N + QL +G ++
Sbjct: 298 RCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRI 333
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG---YPSSGTDAN 71
++ H+P + F +++V A G H L L+ +G+V S G+ GQLG + S +
Sbjct: 109 EIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPV 168
Query: 72 MEPREIRALSGL--------GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
EP + ++L L +V I+AG +HS A G +++WG + G++G+ D
Sbjct: 169 SEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGS--DA 226
Query: 124 VVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P ++ QN KVV +ACG+ HT A+ +W G QL
Sbjct: 227 NAESPRFVA-----SLQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQL 272
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 97/235 (41%), Gaps = 65/235 (27%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP---SSGTDANMEPRE 76
P + + + IACG H + LT E V SWG G GQLG S GT P+
Sbjct: 1262 PQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGT-----PQM 1316
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----------------VEG 119
++AL G +I GGWHSAA + G + WG N GQ+G +EG
Sbjct: 1317 VKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEG 1376
Query: 120 KL----------------------------DLVVHDPH------PMSWSEDFDSQNIKVV 145
K+ L + DP P+S E+ + +NI
Sbjct: 1377 KVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSI-EELNGKNI--C 1433
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQL---SMGCGVSQVSVMTRLSVPEHVKN 197
VA G +H+LAL +W G + + QL ++ ++ ++ R +P VK+
Sbjct: 1434 QVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKS 1488
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 28/188 (14%)
Query: 17 FHMPSRMDHF-LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDAN 71
+ P + F + + ++ACG +H LA + +G V++WG G RGQLG + +
Sbjct: 1200 YSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYA 1259
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ + L ++ I+ G WH+ T + + +WG GQ+G++ H +
Sbjct: 1260 FNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQLGLD----------HNL 1309
Query: 132 SWSEDFDSQNIKVVD------VACGSRHTLALCDDNSLWGCGWNEYNQLSMG----CGVS 181
S Q +K +D + CG H+ A+ + + G N Y QL G C
Sbjct: 1310 SKG---TPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAP 1366
Query: 182 QVSVMTRL 189
+V+ RL
Sbjct: 1367 RVNQYLRL 1374
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 10 LKMLSQVF-HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
L LS+ + ++ F D + ++ G + A+T +G +F+WG G QLG+ SS
Sbjct: 700 LTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKN 759
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+A PRE+ + + VV +S G H A G Y+WG + GQ+G
Sbjct: 760 EAY--PREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLG 805
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG H A+T G V++WG G RGQLG+ S PR +L G +I
Sbjct: 242 VVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKS--VKEEFSPRLNASLRKCGAQKIRC 299
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+ + G LY+ G N GQ+G+ D ++ P ++ N KV+D+
Sbjct: 300 GDDHTLVILRSGQLYSMGANTHGQLGLGDATDRII--PTLVT-----GFANEKVIDIDAK 352
Query: 151 SRHTLALCDDNSLWGCG 167
++AL + ++ G
Sbjct: 353 GCRSIALTNTGKVFAFG 369
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRAL-SGLGVVQISAGGWHSAARTQDGFLYAWG 108
+++WG G G+LG+ P+EI + S +V+++ G HS AR+ DG +YAWG
Sbjct: 1181 IYTWGCGVNGRLGHGFH--TGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWG 1238
Query: 109 WNNGGQVGVEGKLDLV----VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
+ GQ+G D V +P P+ + + ++ +ACG H + L + +
Sbjct: 1239 AGDRGQLGSLENFDCVKINYAFNPQPV-----LNLKRYFILSIACGRWHNMTLTSERQVL 1293
Query: 165 GCGWNEYNQLSMGCGVSQ 182
G E+ QL + +S+
Sbjct: 1294 SWGAGEFGQLGLDHNLSK 1311
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG---YPSSGTDANMEPRE 76
P + + + IACG H L T G V S G G GQLG Y S + P
Sbjct: 651 PYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYF 710
Query: 77 IRALSGLG---VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+ + G G +V++SAG SAA T G L+ WG + Q+G E + + +P
Sbjct: 711 KKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKN----EAYPRE- 765
Query: 134 SEDFDSQNIKVVDVACGSRHTLAL 157
E F I+VVDV+ G H LAL
Sbjct: 766 VEFF--AKIRVVDVSIGDSHMLAL 787
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
+ G VF WG + GQLG G A P +++L +V ISA SA T G LY
Sbjct: 1608 RHGCVFVWGEDTCGQLGI--RGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLY 1665
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
G + G++G L + P P+ E +K++ VACG+ H LAL ++ ++
Sbjct: 1666 VSGGSEHGRLG----LGHMAPAPTPV---EIRSLNTVKIMKVACGTYHCLALTEEKRVYA 1718
Query: 166 CGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
G ++ GVS + + + C I+ + A ++SA LS
Sbjct: 1719 WGDGKWGN----AGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALS 1763
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 9/176 (5%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q PS M L + I+ D +T G ++ G G+LG P
Sbjct: 1629 QAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHMAPAPT--P 1686
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
EIR+L+ + +++++ G +H A T++ +YAWG G GV D++ +P +S
Sbjct: 1687 VEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVL--EPQELS-- 1742
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
++ V G H+ AL L+ G N QL +G + T++S
Sbjct: 1743 ---SLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKIS 1795
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 9/136 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P ++ + +A G H LAL+ G V+SWG GQLG+ + P
Sbjct: 1419 NVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLE 1478
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
R V I+ G SAA + G ++ WG G++G H P ++++
Sbjct: 1479 RHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGELG---------HAPKVLTYAPSL 1529
Query: 138 DSQNIKVVDVACGSRH 153
+VV +ACG +H
Sbjct: 1530 IKDFSEVVQIACGFKH 1545
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 7/155 (4%)
Query: 22 RMDHFLDL--VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
R++ +L L V G +H L + VF+ G+ GQLG P I
Sbjct: 1367 RVNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEE 1426
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G + Q++AG HS A + G +++WG + GQ+G E D + P P+
Sbjct: 1427 LNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLA--PTPLLERHKIPP 1484
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V +ACG + A+ ++ G E +L
Sbjct: 1485 D---VKSIACGYTFSAAMSAKGEVFTWGNGESGEL 1516
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Query: 23 MDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG 82
+D D + +CG H A++Q G + +WGNG GQLG + + P ++ A+
Sbjct: 1847 VDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDIENPVQLPAICN 1906
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNN----GGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+V++ G + ++ G LY G+ + GG + D+ + +
Sbjct: 1907 DPMVKVVCGQEVTIVVSEKGELYMAGYESTIGLGGNSSRRREFDVSFREVEGL------- 1959
Query: 139 SQNIKVVDVACGSRHTLAL 157
I+ +A GS H LAL
Sbjct: 1960 ---IQPTQIAVGSVHVLAL 1975
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + VV I+ G +H T F WG+ + GQLG P + +P EI
Sbjct: 597 VPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHI-SSYMPDPYEIT 655
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSWSE 135
+L + I+ GGWH+ T G + + G GQ+G E L P+ E
Sbjct: 656 SLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVE 715
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWNEY 171
F I V V+ G + A+ + L WG G +EY
Sbjct: 716 GFGDSFI--VKVSAGKESSAAITNKGRLFTWGKG-DEY 750
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 47 EGIVFSWGNGSRGQLGYPSSGT---DANMEPREIRALSGLGVVQISAGGWHSAARTQDGF 103
+G ++++G G G+LG+ T ++ P+ I L+ + VV I+ G +AA T G
Sbjct: 514 DGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGK 573
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+Y WG + G++G+ L + P + +D S V ++ G H D +
Sbjct: 574 VYTWGKSAQGKLGLGSGKPLAIVVPQLV---QDLSSH--VVCQISLGRNHAACSTDMHKF 628
Query: 164 WGCGWNEYNQLSM 176
+ G N + QL +
Sbjct: 629 FVWGSNTFGQLGI 641
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
P ++ F + V D++ G H LAL G+ +SWGNGS GQLG+
Sbjct: 763 PREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGH 806
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPREIRALSGLGVVQIS 89
V IACG+ A++ +G VF+WGNG G+LG+ P T A P I+ S VVQI+
Sbjct: 1486 VKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPKVLTYA---PSLIKDFS--EVVQIA 1540
Query: 90 AGGWHSA 96
G H A
Sbjct: 1541 CGFKHMA 1547
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 38/170 (22%)
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
S G D +ME R IR I G H ++ WG G++G + + +
Sbjct: 69 SEGYDYHMEKRYIRE-------NIELQGSH---------VFMWGDGENGKLGNQS--EEI 110
Query: 125 VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
H P+ + +N+ V A G +HTL L D + CG N Y QL MG + +S
Sbjct: 111 QHVPYIVP-----AFRNVLVKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGDHM--LS 163
Query: 185 VMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHWNS 234
T +S P K+ ++ + N +IV + AG+++S
Sbjct: 164 RSTPVSEPSKQKSLDKLQAIIQSLN-------------NIVGIAAGYYHS 200
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
VF WG+G G+LG S + P + A + V + G H+ + DG + + G
Sbjct: 92 VFMWGDGENGKLGNQSE--EIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGS 149
Query: 110 NNGGQVGVEGKL---DLVVHDPHPMSWSEDFDS--QNI-KVVDVACGSRHTLALCDDNSL 163
N GQ+G+ + V +P + + Q++ +V +A G H+LAL D +
Sbjct: 150 NVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKI 209
Query: 164 WGCGWNEYNQLSMG 177
+ G + +L +G
Sbjct: 210 FSWGSGSWGKLGIG 223
>gi|329664574|ref|NP_001192921.1| RCC1 domain-containing protein 1 [Bos taurus]
Length = 377
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 9 PLKMLSQVFHMPSRMDHFLDLVVT----DIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
PL ++ + P R + L T + G +H L L G VFSWG G GQLG+
Sbjct: 136 PLLPCARAYVSP-RPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGH- 193
Query: 65 SSGT-DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV-------- 115
GT +A EPR + AL GL + +++AGGWHS ++ G +Y WGWN GQ+
Sbjct: 194 --GTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLA 251
Query: 116 ----------------GVEGKLDLVVHD--PHPMSWSEDFD-----SQNIKVVDVACGSR 152
G E K D P P + F S + V V+CGSR
Sbjct: 252 EDGKTTAGEASGLEEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSR 311
Query: 153 HTLALCDDNSLWGCGWNEYNQL 174
HT L L+ GW +Y QL
Sbjct: 312 HTAVLTRTGELYTWGWGKYGQL 333
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 68/171 (39%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP--------------- 64
P ++ L + ++A G H + L++ G ++ WG GQL P
Sbjct: 202 PRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAGEA 261
Query: 65 -------------SSGTDANMEP----REIRAL----SGLGVVQISAGGWHSAARTQDGF 103
S+G D P + AL G V++S G H+A T+ G
Sbjct: 262 SGLEEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGE 321
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G + D D P E F + ++V V+CG +T
Sbjct: 322 LYTWGWGKYGQLGHK---DTTTLD-RPCR-VEYFVDKQLQVRTVSCGPWNT 367
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D FL+ V D+ CG H + + +G V++ G GQLG+ A P + A
Sbjct: 25 PRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKARKRPEHVGA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG GQ+G+ G + V + S SE
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSE---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + ++ + +ACG+ H LAL++ VFSWG GQLG P+ I
Sbjct: 126 RVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL-GYEYKKQTSPQMI 184
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
++L G+ QI+AGG HS T G ++ WG N GQ+G+ +D + + +
Sbjct: 185 KSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD-----NDRYVPTLLKSL 239
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
SQ KVV + CG HT AL + ++ G Y QL
Sbjct: 240 RSQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 21/153 (13%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
+ ++CG H LAL +G V++WG + GQLG P GT+ + PR IR+LS + +VQ++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP--GTEECVRVPRNIRSLSEIQIVQVA 143
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK------ 143
G +HS A ++ +++WG N GQ+G+ + + Q IK
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNKYGQLGLG------------YEYKKQTSPQMIKSLLGIP 191
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+A G H+ L +++G G N++ QL +
Sbjct: 192 FAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + V I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H+ A G +Y++G GQ+G
Sbjct: 289 FELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGT 329
>gi|302783358|ref|XP_002973452.1| hypothetical protein SELMODRAFT_99040 [Selaginella moellendorffii]
gi|300159205|gb|EFJ25826.1| hypothetical protein SELMODRAFT_99040 [Selaginella moellendorffii]
Length = 437
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRALSGLGVVQIS 89
V + CG H A+ G V++WG GS GQLG+ S + + PR + L G+ VVQIS
Sbjct: 211 VKQVVCGEYHTAAIAHNGDVYTWGLGSSGQLGHRSLQSGNKEVLPRRVVTLEGVDVVQIS 270
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV-- 147
AGG HS A + G LY WG ++ GQ+G+ + D + S DF Q I V+ +
Sbjct: 271 AGGVHSCAISSAGGLYMWGGSHAGQLGLGPRQDRICG-----SSDIDFFFQRIPVLVIPS 325
Query: 148 -----ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL + L GCG+N Y Q G
Sbjct: 326 GARSATCGDLHTLVRMANGRLLGCGYNSYGQADSG 360
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGL 83
H L + I+CG +H A+ +G +F+WG+ GQLG G++ N + P+ + L
Sbjct: 42 HPSSLRLIAISCGLEHTAAIASDGSLFTWGSNQFGQLG---DGSETNSDRPKRVYGLRDE 98
Query: 84 GVVQISAGGWHSAA------RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
V ++ G +AA T G ++ WG N G P +S F
Sbjct: 99 AVKSVACGANCTAAIADSRDGTCRGRMWIWGQNQGSN--------------SPRLFSGAF 144
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S + V+ VACG H AL + L G+NE+ QL G
Sbjct: 145 SSSTV-VIQVACGGAHAAALSEHGVLQTWGYNEHGQLGRG 183
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
LYAWG+N GQ G E + V PHP+ + +++++ ++CG HT A+ D SL
Sbjct: 12 LYAWGYNQCGQAGQESAIHNAV--PHPIRVA--IHPSSLRLIAISCGLEHTAAIASDGSL 67
Query: 164 WGCGWNEYNQLSMG 177
+ G N++ QL G
Sbjct: 68 FTWGSNQFGQLGDG 81
>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
Length = 4305
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 15/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
P+ + + +T +AC G HCLAL+ +G V+SWG G G+LG+ G + + P+
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGH---GNRVSYDRPKL 4083
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I ALSGL VV I+ GG HSA T G +Y WG G++G D ++ P +
Sbjct: 4084 ITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLI--PKLVEALSS 4141
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
F +V+DVACGS TL + DD+++W G +Y +L G
Sbjct: 4142 F-----RVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4179
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHS 95
G H LALT +G V+SWG G G+LG+ G +E PR I +L+G V+ I+ G HS
Sbjct: 3152 GGKHALALTADGKVYSWGEGEDGKLGH---GNRITLEAPRLIESLAGERVISIACGSAHS 3208
Query: 96 AARTQDGFLYAWGWNNGGQVG-VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR-- 152
A T G LY WG G++G + + LV ++ N +V+ VACGSR
Sbjct: 3209 ACVTARGHLYTWGLGEYGRLGHGDDNIQLVPKMVEALA--------NYRVIQVACGSRDA 3260
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
TLAL ++ G ++ +L G
Sbjct: 3261 QTLALTACGKVFSWGDGDFGKLGRG 3285
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P ++ + V +ACG LALT G VFSWG+G G+LG G+D P
Sbjct: 3238 VPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLG--RGGSDGCAIPMN 3295
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L+ LGV Q+ G S A T+DG ++ WG + ++G D V P + E
Sbjct: 3296 VERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLG--HGCDAHVRRP---TLVEA 3350
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +V+ VA G+ H LA+ +N +W G N++ Q G
Sbjct: 3351 LRGR--RVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGNG 3389
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P ++ V IACG H +T G +++WG G G+LG+ + + P+
Sbjct: 3183 TLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEYGRLGH--GDDNIQLVPK 3240
Query: 76 EIRALSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+ AL+ V+Q++ G + A T G +++WG + G++G G + PM+
Sbjct: 3241 MVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGCAI----PMN- 3295
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
E +S + V V CG++ +LAL D +W G +Y +L GC
Sbjct: 3296 VERLNS--LGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGC 3338
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S+ +P R+D L V + CG +AL Q G V++WG G +LG+ S +
Sbjct: 4181 SEGCKLPMRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGS--YEHVRR 4238
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
P + + G +V I+ G H A T G +Y WG N+ GQ+G
Sbjct: 4239 PMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLG 4281
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV--VQISAG 91
IA G ++ +G +F+ G G+ G+LG S + PR LS + V V + +G
Sbjct: 3095 IAGGSKTLFIVSHDGKLFACGEGTNGRLGLGHSNNVST--PRANPYLSHVLVRRVAVHSG 3152
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
G H+ A T DG +Y+WG G++G ++ L P + E + +V+ +ACGS
Sbjct: 3153 GKHALALTADGKVYSWGEGEDGKLGHGNRITL--EAPRLI---ESLAGE--RVISIACGS 3205
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMG 177
H+ + L+ G EY +L G
Sbjct: 3206 AHSACVTARGHLYTWGLGEYGRLGHG 3231
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 80/204 (39%), Gaps = 60/204 (29%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY----------PSSGTD 69
P + H V +A G +T G +++WG G++G+LG+ P S
Sbjct: 568 PQPLHHLAHHEVVRVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNA 627
Query: 70 ANME---------------------------------PREIRALSGLGVVQISAGG-WHS 95
N+E PR + AL+ V ++ G WH
Sbjct: 628 HNIERIIDVALGWGEGSTLCCTWEGAVQVFGEGEAGTPRALSALAMFRVTRVYTGEHWH- 686
Query: 96 AARTQDGFLYAWGWNNGGQVG----VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
AA T G +Y WG +G ++G K+ +V Q IK+VD++ G+
Sbjct: 687 AALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVE-----------ALQGIKIVDLSLGA 735
Query: 152 RHTLALCDDNSLWGCGWNEYNQLS 175
H +AL + L+ G +E Q+S
Sbjct: 736 SHGIALSSEGVLFVWGTHERTQIS 759
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 30 VVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+T ++C H L + G +SWG G G+LG+ T A P+ + L+ VV+
Sbjct: 524 TITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGH--GDTAARDAPQPLHHLAHHEVVR 581
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI-KVVD 146
++AG SA T G LY WG G++G G ++ + P P+S F++ NI +++D
Sbjct: 582 VAAGLACSAVITSRGALYTWGRGAQGRLG-HGTIENCL-TPQPVS----FNAHNIERIID 635
Query: 147 VACG 150
VA G
Sbjct: 636 VALG 639
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ ++ IA G HC+A T G V++WG+ GQLG T A PR + A
Sbjct: 4239 PMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLG--DGTTLAAQRPRLLMA 4296
Query: 80 L 80
L
Sbjct: 4297 L 4297
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V+ WG+ RGQLG P AL+ L VQ+ G A T DG +YA G+
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRT--PTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGY 4010
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC--GSRHTLALCDDNSLWGCG 167
G G +D V P ++ Q++ + VAC G +H LAL D ++ G
Sbjct: 4011 GA-GGRLGIGGID-SVSQPTLLA-----SIQHVFITKVACNSGGKHCLALSADGEVYSWG 4063
Query: 168 WNEYNQLSMGCGVS--QVSVMTRLS 190
E +L G VS + ++T LS
Sbjct: 4064 EGEDGKLGHGNRVSYDRPKLITALS 4088
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
+P ++ + + D++ G H +AL+ EG++F WG R Q+ P
Sbjct: 716 IPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTHERTQISNP 761
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
VF WG + QLG G+ + P ALS L V I+ G + DG L+A G
Sbjct: 3059 VFVWGLNDKDQLGG-VKGSKVKV-PVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACGE 3116
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
G++G+ ++ +P ++ V V G +H LAL D ++ G
Sbjct: 3117 GTNGRLGLGHSNNVSTPRANPY-----LSHVLVRRVAVHSGGKHALALTADGKVYSWGEG 3171
Query: 170 EYNQLSMG 177
E +L G
Sbjct: 3172 EDGKLGHG 3179
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G++G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL-GIECQKQTS 180
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL-- 236
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 -KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 722
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 86/155 (55%), Gaps = 8/155 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ + + G H A+T G +++WG S GQLG+ + D + P+E++A
Sbjct: 257 PLQIESLSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKAD--IFPKEVQA 314
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V ++ G H+ A +++ L++WG N+ GQ+G + +L DP +S+ ED
Sbjct: 315 LQNTYIVSVACGEGHTLALSKNNELFSWGLNSSGQLGRASE-NLKSSDPKKISFFED--- 370
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +ACGS+H+L L D +++ G N+Y QL
Sbjct: 371 --KSIKQIACGSKHSLVLLQDGTVYSWGSNQYGQL 403
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 11/141 (7%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
AC D +A+ ++G +FSWG G +LGY + + P +I +LS ++Q S G +H
Sbjct: 220 ACS-DFTIAIDKQGRIFSWGKGGFNRLGYKAEIVNQ-KHPLQIESLSKQQIIQFSLGSFH 277
Query: 95 SAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
SAA T +G LY WG ++ GQ+G + K D+ + + QN +V VACG H
Sbjct: 278 SAAITNNGRLYTWGRDSNGQLGHGQAKADIFPKEVQAL--------QNTYIVSVACGEGH 329
Query: 154 TLALCDDNSLWGCGWNEYNQL 174
TLAL +N L+ G N QL
Sbjct: 330 TLALSKNNELFSWGLNSSGQL 350
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P + + + +ACG H LAL++ +FSWG S GQLG S ++ +P++I
Sbjct: 308 FPKEVQALQNTYIVSVACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKSS-DPKKIS 366
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
+ QI+ G HS QDG +Y+WG N GQ+G +
Sbjct: 367 FFEDKSIKQIACGSKHSLVLLQDGTVYSWGSNQYGQLGFD 406
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANME-----PREIRALS 81
+ I CG +H A+ V++WG +LG Y + A++ P ++ LS
Sbjct: 30 IVKIVCGANHSYAIDTNFEVYAWGCNLGRKLGLSDEYYNQIFQADIPEQIKIPVKVTELS 89
Query: 82 GLGVVQISAGGWHSAA-RTQDGFLYAWGWNNGGQVGVEGKLDLV-------VHDPHPMSW 133
+ IS G HS A T+ +Y WG G++G + DL + P + W
Sbjct: 90 NKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNKESKDLQYPEIFNGLKQPEGIQW 149
Query: 134 SEDFDSQNIKVVDVACGSRHTLALC 158
++ +++CG HT+A+
Sbjct: 150 ---------EISEISCGENHTVAVI 165
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G++G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL-GIECQKQTS 180
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL-- 236
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 -KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
>gi|26353714|dbj|BAC40487.1| unnamed protein product [Mus musculus]
Length = 377
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 31/176 (17%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+L V + G +H L L G VFSWG G GQLG+ + +A +EPR + AL GL + +
Sbjct: 160 ELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGT--LEAELEPRLLEALQGLRMAK 217
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK--LDLVVHDPHPMSWSEDFDSQNIKVV 145
++AGGWHS ++ G +Y WGWN GQ+ + + + +ED + + V
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVA 277
Query: 146 D---------------------------VACGSRHTLALCDDNSLWGCGWNEYNQL 174
D +CGSRHT + L+ GW +Y QL
Sbjct: 278 DAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQL 333
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 64/169 (37%), Gaps = 39/169 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIR 78
P ++ L + +A G H + L++ G ++ WG GQL P+ SGT+ E E
Sbjct: 204 PRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEAT 263
Query: 79 ALS---------------------------------GLGVVQISAGGWHSAARTQDGFLY 105
L+ G V S G H+A T+ G LY
Sbjct: 264 ELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELY 323
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
WGW GQ+G + L P E F + ++V V CG +T
Sbjct: 324 TWGWGKYGQLGHKDSTSL----DRPCC-VEYFVERQLEVRAVTCGPWNT 367
>gi|311260691|ref|XP_001927570.2| PREDICTED: RCC1 domain-containing protein 1 [Sus scrofa]
Length = 385
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFL-----DLVVTDIACGFDHCLALTQEGIVFSWGNGS 57
D +GPL +L S F L + G +H L L G VFSWG G
Sbjct: 133 DETQAGPLPLLPCASAYVSPQPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGGGR 192
Query: 58 RGQLGYPSSGT-DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV- 115
GQLG+ GT +A EPR + AL GL + +++AGGWHS ++ G +Y WGWN GQ+
Sbjct: 193 HGQLGH---GTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWNESGQLA 249
Query: 116 -----------------------GVEGKLDLVVHD--PHPMSWSEDFDS-----QNIKVV 145
G E K D P P + F + V
Sbjct: 250 LPARSLAEDGKTITGDAPGLNEDGSEAKRATEGEDGGPTPFIAVQPFPALLDLPLGSDAV 309
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+CGSRHT + L+ GW +Y QL
Sbjct: 310 KASCGSRHTAVVTRTGELYTWGWGKYGQL 338
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP--------------- 64
P ++ L + ++A G H + +++ G ++ WG GQL P
Sbjct: 207 PRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPARSLAEDGKTITGDA 266
Query: 65 -------------SSGTDANMEP----REIRALSGLGV----VQISAGGWHSAARTQDGF 103
+ G D P + AL L + V+ S G H+A T+ G
Sbjct: 267 PGLNEDGSEAKRATEGEDGGPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGE 326
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G + L P E F + ++V V+CG +T
Sbjct: 327 LYTWGWGKYGQLGHKDTTSL----DRPCR-VEYFVDKQLQVRTVSCGPWNT 372
>gi|289666776|ref|NP_775621.2| RCC1 domain-containing protein 1 [Mus musculus]
gi|190360158|sp|Q8BTU7.2|RCCD1_MOUSE RecName: Full=RCC1 domain-containing protein 1
Length = 377
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 31/176 (17%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+L V + G +H L L G VFSWG G GQLG+ + +A +EPR + AL GL + +
Sbjct: 160 ELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGT--LEAELEPRLLEALQGLRMAK 217
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK--LDLVVHDPHPMSWSEDFDSQNIKVV 145
++AGGWHS ++ G +Y WGWN GQ+ + + + +ED + + V
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVA 277
Query: 146 D---------------------------VACGSRHTLALCDDNSLWGCGWNEYNQL 174
D +CGSRHT + L+ GW +Y QL
Sbjct: 278 DAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQL 333
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 64/169 (37%), Gaps = 39/169 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIR 78
P ++ L + +A G H + L++ G ++ WG GQL P+ SGT+ E E
Sbjct: 204 PRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEAT 263
Query: 79 ALS---------------------------------GLGVVQISAGGWHSAARTQDGFLY 105
L+ G V S G H+A T+ G LY
Sbjct: 264 ELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELY 323
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
WGW GQ+G + L P E F + ++V V CG +T
Sbjct: 324 TWGWGKYGQLGHKDSTSL----DRPCC-VEYFVERQLEVRAVTCGPWNT 367
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G++G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIE-CQKQTS 180
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL-- 236
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 -KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
Length = 1053
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D V+T IACG H +ALT+ G V SWG+ GQLG+ +S D P+ +R
Sbjct: 77 PLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQLGH-ASDQDVIQLPKIVRY 135
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VVQI+ G HS A T G LY+WG N GQ+GV+ +L + +PM +
Sbjct: 136 LVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSELSQCN-YPMRLTTLL-- 192
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I +ACG HT + ++++G G N QL +
Sbjct: 193 -GIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGL 228
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANME 73
V +P + + + V IACG +H LALT G ++SWG+ GQLG PS + N
Sbjct: 126 VIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSELSQCNY- 184
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + L G+ I+ GG H+ ++ ++ WG NN GQ+G+ + + +P
Sbjct: 185 PMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDE----TNRAYPTQL 240
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ + V VACG ++ L ++ ++ CG Y QL G G S ++ R+
Sbjct: 241 K---TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL--GHGFSSNEMLPRM 291
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS++ D V +ACG H L LT G V++ G+ QLG+ P +I
Sbjct: 27 PSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACGSNDYSQLGHEL----PTKRPLQIPE 82
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L + QI+ G HS A T+ G + +WG N GQ+G D V+ P + +
Sbjct: 83 LEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQD-VIQLPKIVRY-----L 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
+ VV +ACG+ H+LAL L+ G N Y QL GV S +++ + P
Sbjct: 137 VSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQL----GVKSPSELSQCNYP 185
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P R+ L + IACG +H +++ VF WG + GQLG A P ++
Sbjct: 183 NYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAY--PTQL 240
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L LGV ++ G S T +G ++ G GQ+G H S +E
Sbjct: 241 KTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG------------HGFSSNEML 288
Query: 138 DSQNIKVV-----DVACGSRHTLALCDDN-SLWGCGWNEYNQL 174
++++ VACG+RHTLAL ++G G QL
Sbjct: 289 PRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQL 331
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WGN S GQLG + + P +I V Q++ G H+ T G +YA G
Sbjct: 3 LYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACGS 62
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ Q+G E L P + ED+ + +ACGSRH++AL + + G N
Sbjct: 63 NDYSQLGHE----LPTKRPLQIPELEDY-----VITQIACGSRHSMALTEWGQVLSWGDN 113
Query: 170 EYNQL 174
E QL
Sbjct: 114 ECGQL 118
>gi|321471075|gb|EFX82049.1| hypothetical protein DAPPUDRAFT_210805 [Daphnia pulex]
Length = 510
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG---VV 86
V + CG HCLALT EG VF+WG + GQ G S T PR R SG+G VV
Sbjct: 107 TVIQVGCGNHHCLALTSEGEVFAWGQNNGGQCG--SGTTTGQSVPR--RVTSGIGGHKVV 162
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
I+ G S A DG LY WG+N G++G+ + H+P +S + + +
Sbjct: 163 AIACGQLTSMALLDDGDLYGWGYNGNGELGIGNNNNQ--HNPVRVS-----NLHKVFITQ 215
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG---VSQVSVMTRLSVPEHVKNCPIVKL 203
+ CG H LAL D L+ G N Y QL G +S V V L + C + +
Sbjct: 216 IVCGFAHCLALTDQGELYAWGANSYGQLGTGYKTHHLSPVIVAPELGKAVEIAACHLSHI 275
Query: 204 FAEHWNSARLSVPEHAKDSSI 224
A ++ ++ + H + SI
Sbjct: 276 SAAMFHDGKIFMWGHCRGHSI 296
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P +++ + +A G H LA + G +++WG + QLG + T+ + P +
Sbjct: 43 PRKIESLCKKKIKGLAYGSGLHLLAFSDSGELYTWGYNTYSQLG--NGNTNHTLTPSLVS 100
Query: 79 -ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G V+Q+ G H A T +G ++AWG NNGGQ G V P +
Sbjct: 101 GVLAGKTVIQVGCGNHHCLALTSEGEVFAWGQNNGGQCGSGTTTGQSV----PRRVTSGI 156
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
KVV +ACG ++AL DD L+G G+N +L +G
Sbjct: 157 GGH--KVVAIACGQLTSMALLDDGDLYGWGYNGNGELGIG 194
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H P R+ + + +T I CGF HCLALT +G +++WG S GQLG +G + I
Sbjct: 200 HNPVRVSNLHKVFITQIVCGFAHCLALTDQGELYAWGANSYGQLG---TGYKTHHLSPVI 256
Query: 78 RALSGLGVVQISAGGWH--SAARTQDGFLYAWGWNNG 112
A V+I+A SAA DG ++ WG G
Sbjct: 257 VAPELGKAVEIAACHLSHISAAMFHDGKIFMWGHCRG 293
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG-GWHSAARTQ 100
+ +T + V++ G S G LG T + ++PR+I +L + ++ G G H A +
Sbjct: 13 IMVTVDDDVYAMGCNSSGCLGLGD--TASALQPRKIESLCKKKIKGLAYGSGLHLLAFSD 70
Query: 101 DGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
G LY WG+N Q+G G + H P S + V+ V CG+ H LAL +
Sbjct: 71 SGELYTWGYNTYSQLG-NGNTN---HTLTPSLVSGVLAGKT--VIQVGCGNHHCLALTSE 124
Query: 161 NSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
++ G N Q G Q SVP V +
Sbjct: 125 GEVFAWGQNNGGQCGSGTTTGQ-------SVPRRVTS 154
>gi|75076912|sp|Q4R828.1|RCCD1_MACFA RecName: Full=RCC1 domain-containing protein 1
gi|67968774|dbj|BAE00744.1| unnamed protein product [Macaca fascicularis]
Length = 376
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 35/179 (19%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLTMA 213
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQV------------------------GVEGKLD 122
+++AGGWHS ++ G +Y WGWN GQ+ G + K
Sbjct: 214 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRT 273
Query: 123 LVVHD--PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V D P P + F + V V+CGSRHT + L+ GW +Y QL
Sbjct: 274 GRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQL 332
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 47/174 (27%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ L + ++A G H + +++ G ++ WG GQL P+ D RE
Sbjct: 201 PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 260
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G V++S G H+A T+ G
Sbjct: 261 TGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGE 320
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS---EDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E D + W E F + ++V V CG +T
Sbjct: 321 LYTWGWGKYGQLGHE--------DTTSLDWPRRVEYFVDKQLQVKAVTCGPWNT 366
>gi|26326847|dbj|BAC27167.1| unnamed protein product [Mus musculus]
Length = 377
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 31/176 (17%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+L V + G +H L L G VFSWG G GQLG+ + +A +EPR + AL GL + +
Sbjct: 160 ELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGT--LEAELEPRLLEALQGLRMAK 217
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK--LDLVVHDPHPMSWSEDFDSQNIKVV 145
++AGGWHS ++ G +Y WGWN GQ+ + + + +ED + + V
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVA 277
Query: 146 D---------------------------VACGSRHTLALCDDNSLWGCGWNEYNQL 174
D +CGSRHT + L+ GW +Y QL
Sbjct: 278 DAGAPAHFIAIQPFPALVDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQL 333
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 64/169 (37%), Gaps = 39/169 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIR 78
P ++ L + +A G H + L++ G ++ WG GQL P+ SGT+ E E
Sbjct: 204 PRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEAT 263
Query: 79 ALS---------------------------------GLGVVQISAGGWHSAARTQDGFLY 105
L+ G V S G H+A T+ G LY
Sbjct: 264 ELNEDGLKEELAVADAGAPAHFIAIQPFPALVDLPLGSDAVMASCGSRHTAVVTRTGELY 323
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
WGW GQ+G + L P E F + ++V V CG +T
Sbjct: 324 TWGWGKYGQLGHKDSTSL----DRPCC-VEYFVERQLEVRAVTCGPWNT 367
>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
gorilla gorilla]
Length = 982
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
++ P ++ + + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGR-NVPAQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ VV ++CG HT L D ++ G N QL
Sbjct: 226 KPLSIGA---LKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQL 268
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 85/159 (53%), Gaps = 7/159 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + L+V ++CG +H LA+ +G VF+WG GS GQLG + + P++I
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G+ ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASPQRVR 176
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 177 SLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLAL 215
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG G P I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P ++ IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIT-----TLNGIKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 19/143 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P R+ + + +A G H AL+ G F WG+ S GQL A +P I
Sbjct: 172 PQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIG 231
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL LGVV IS G H+A TQDG ++ +G N GQ+G + P P E
Sbjct: 232 ALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLG---------YSPTP----EKRG 278
Query: 139 SQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 279 PQLVERIDGLVSQIDCGSYHTLA 301
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 29/177 (16%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F WG SR ++ R G ++Q ++G HS + + + G
Sbjct: 1 MYFCWGADSR------------ELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCG 48
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VACGSRHTLALCDDNSLWGCG 167
N+ GQ+G G + P P+ E +VD V+CG H+LA+C ++ G
Sbjct: 49 DNSRGQLGRRGAQRGEL--PEPIQALETL------IVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSI 224
QL +G +++ +K I+++ H++S LS KDS +
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKITTLNGIK---IIQVSCGHYHSLALS-----KDSQV 149
>gi|393244921|gb|EJD52432.1| RCC1/BLIP-II [Auricularia delicata TFB-10046 SS5]
Length = 544
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
D A GP + + P M +ACG DH LALT G+VFSWGNG QLG
Sbjct: 249 DSGAPGPTRQFT-----PQVMPDLARYRFVSVACGQDHVLALTTTGLVFSWGNGEDSQLG 303
Query: 63 ---YPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-- 117
+A M R L+ +V I+AG S A +DG +YAWG N GQ GV
Sbjct: 304 RRILDRRRRNALMADR----LALRHIVYIAAGHNTSFAMDKDGVVYAWGLNGYGQTGVDP 359
Query: 118 -EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+G + V+ P + F +V + + HTL +D +L+GCG N+ QL +
Sbjct: 360 EDGGDENVIEHPTRVKALHPFVLGGRRVAQIVSANAHTLWRLEDGTLYGCGRNDEAQLGL 419
Query: 177 GCGVSQVSVMTRLSVPEHVK 196
Q + R+ P H++
Sbjct: 420 APNHPQ-AAEGRVRTPVHIR 438
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 30/187 (16%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANM--EPREIRAL-----SGLGV 85
IA G + A+ ++G+V++WG GQ G P G D N+ P ++AL G V
Sbjct: 328 IAAGHNTSFAMDKDGVVYAWGLNGYGQTGVDPEDGGDENVIEHPTRVKALHPFVLGGRRV 387
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGV--------EGKLDLVVH----------D 127
QI + H+ R +DG LY G N+ Q+G+ EG++ VH D
Sbjct: 388 AQIVSANAHTLWRLEDGTLYGCGRNDEAQLGLAPNHPQAAEGRVRTPVHIRLPDPPTESD 447
Query: 128 PHP----MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
P+P S + Q KVV +A H LA+ D +++ GW +QL++G +
Sbjct: 448 PNPALPAFSAKDATGPQANKVVSMAASGWHNLAVSDAGNVYCWGWGANHQLALGPSAEKQ 507
Query: 184 SVMTRLS 190
V T +
Sbjct: 508 VVPTMIK 514
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 66/161 (40%), Gaps = 27/161 (16%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP------REIRALSGL---- 83
+ G H LA+ +EG ++SWG GQLG ++ + P E+ A L
Sbjct: 149 VVSGAMHTLAIDEEGRMWSWGINDEGQLGRVTNDVEDPANPGQKLDKDELEATPALIQGL 208
Query: 84 -----GVVQISAGGWHSAARTQDGFLYAWG---WNN--GGQVGVEGKLDLVVHDPHPMSW 133
V+I+AGG S A + +G + +WG W+ G G G P
Sbjct: 209 DHQDFRAVRIAAGGSVSVALSDEGEVRSWGSFKWDGLLGFDSGAPGPTRQFTPQVMP--- 265
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D + V VACG H LAL ++ G E +QL
Sbjct: 266 ----DLARYRFVSVACGQDHVLALTTTGLVFSWGNGEDSQL 302
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 90.5 bits (223), Expect = 5e-16, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 22/187 (11%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-- 73
+ H P + +V IACG H LALT G +++WG+ S GQLG G D +E
Sbjct: 151 IAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGL---GQDVKIETR 207
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ I L+ + + I+ GG+HS ++ G ++ WG N GQ+G+ D V P +
Sbjct: 208 PKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISDKYV--PCLLK- 264
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV---------- 183
+N KV VACG ++ L D ++ CG Y QL G +++
Sbjct: 265 ----TLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILPRQIIELMG 320
Query: 184 SVMTRLS 190
SV+T++S
Sbjct: 321 SVVTQIS 327
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 60/182 (32%), Positives = 81/182 (44%), Gaps = 13/182 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP +D V IACG H + +T++G VFS GN GQLG+ M P
Sbjct: 51 MPRELDFQKATAVEQIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRLQMIP---- 106
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L Q + G HS A G L+ WG N GQ+G+ L + H P +
Sbjct: 107 GLDAFIFKQAACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLT-IAHTPRMVK-----A 160
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
VV +ACG +HTLAL ++ L+ G N QL +G V + TR + +
Sbjct: 161 LGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLG---QDVKIETRPKLITGLATI 217
Query: 199 PI 200
PI
Sbjct: 218 PI 219
Score = 84.3 bits (207), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 7/142 (4%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
ACG H +A+ G +F WG+ + GQLG + T A+ PR ++AL VVQI+ G H
Sbjct: 117 ACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHT-PRMVKALGTSIVVQIACGKKH 175
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
+ A T +G LYAWG N+ GQ+G+ G+ + P ++ I + +ACG H+
Sbjct: 176 TLALTNNGELYAWGSNSDGQLGL-GQDVKIETRPKLIT-----GLATIPIAFIACGGYHS 229
Query: 155 LALCDDNSLWGCGWNEYNQLSM 176
+ + +++G G N + QL M
Sbjct: 230 IVVSKSGAVFGWGRNTFGQLGM 251
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPRE 76
++P + + V +ACG + + LT +G VF+ G G GQLG+ G ++N + PR+
Sbjct: 258 YVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGH---GANSNEILPRQ 314
Query: 77 IRALSGLGVVQISAGGWHSAARTQD-GFLYAWGW 109
I L G V QIS G H+ A G +YAWG
Sbjct: 315 IIELMGSVVTQISCGKRHTLALVPSRGKVYAWGL 348
>gi|405950964|gb|EKC18916.1| RCC1 and BTB domain-containing protein 1 [Crassostrea gigas]
Length = 531
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 17/192 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGV-VQI 88
+ +ACG H +AL+QEG +F+WG + GQ+G SG+ N PR++ A+ G + + I
Sbjct: 130 ILRVACGSHHSMALSQEGEIFAWGQNNCGQVG---SGSTTNQPTPRKVVAVIGNKMALSI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A ++G +Y WG+N GQ+G+ V+ P+P + Q + + +
Sbjct: 187 ACGQTSSMALLENGEVYGWGYNGNGQLGLGNN----VNQPNPCRVQQ---LQGVIISQLV 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
CG HTLAL D+ SL+ G N Y QL G +QVS VP + + +V++ A H+
Sbjct: 240 CGYAHTLALSDEGSLFSWGANSYGQLGTGNKANQVSPS---KVPMNGER--MVEIAASHY 294
Query: 209 NSARLSVPEHAK 220
++ E K
Sbjct: 295 AHISAAMSETGK 306
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P ++D + DIA G H LA+++ G ++SWG+ QLG + G+ + P I
Sbjct: 65 PRKVDVLCKKKIVDIAFGSGPHVLAVSKNGEMYSWGHNGYCQLG--NGGSGQGLTPTLIN 122
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G +++++ G HS A +Q+G ++AWG NN GQVG + P P
Sbjct: 123 TNLQGKKILRVACGSHHSMALSQEGEIFAWGQNNCGQVGSGS----TTNQPTPRKVVAVI 178
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
N + +ACG ++AL ++ ++G G+N QL +G V+Q
Sbjct: 179 G--NKMALSIACGQTSSMALLENGEVYGWGYNGNGQLGLGNNVNQ 221
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ ++++ + CG+ H LAL+ EG +FSWG S GQLG +G AN
Sbjct: 224 PCRVQQLQGVIISQLVCGYAHTLALSDEGSLFSWGANSYGQLG---TGNKANQVSPSKVP 280
Query: 80 LSGLGVVQISAGGWH--SAARTQDGFLYAWGWNNG 112
++G +V+I+A + SAA ++ G ++ WG G
Sbjct: 281 MNGERMVEIAASHYAHISAAMSETGKVFMWGQCRG 315
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ P R D F++ V D+ CG H + + +G V++ G GQLG+ S +P
Sbjct: 20 EIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKP 75
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
++ AL +V ++ G H+ A G +YAWG ++ GQ+G++G + + + S S
Sbjct: 76 EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 136 D------IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L+ + +P + D+ + +ACG+ H LAL++ VF WG GQLG G D
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GID 174
Query: 70 ANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
+ P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V
Sbjct: 175 CQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-- 232
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 233 PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V Q++ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+ WGN S GQLG + +EPR V + G H+ DG +Y G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 110 NNGGQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
N+ GQ+G E K + VV D+QNI V VACG HTLAL D ++
Sbjct: 61 NDLGQLGHEKSRKKPEQVVA----------LDAQNI--VAVACGEAHTLALNDKGQVYAW 108
Query: 167 GWNEYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
G + QL + G + + VP ++K + IV++ +++S LS
Sbjct: 109 GLDSDGQLGLQ-GSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D V+T IACG H +AL++ G VFSWG+ GQLG+ +S D P+ +R
Sbjct: 77 PLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQLGH-ASDQDIVKLPKIVRN 135
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VVQI+ G HS A T G LY+WG N GQ+GV DL + PM +
Sbjct: 136 LVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPNDLQQSNT-PMRLTTLL-- 192
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I V +ACG H+ + ++++G G N QL +
Sbjct: 193 -GIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGL 228
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANME 73
+ +P + + + V IACG +H LALT G ++SWG+ GQLG P+ +N
Sbjct: 126 IVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPNDLQQSNT- 184
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + L G+ V I+ GG HS ++ ++ WG NN GQ+G+ + + +P
Sbjct: 185 PMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE----TNRAYPTQL 240
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ + V VACG ++ L + ++ CG Y QL G G S ++ R+
Sbjct: 241 K---TLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQL--GHGFSSNEMLPRM 291
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PSR+ D V IACG H L LT G V++ G+ QLG+ P +I
Sbjct: 27 PSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGSNDYSQLGHEL----PTKRPLQIPE 82
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L + QI+ G HS A ++ G +++WG N GQ+G D +V P + +
Sbjct: 83 LQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQD-IVKLPKIVR-----NL 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
+ VV +ACGS H+LAL L+ G N Y QL GVS + + + + P
Sbjct: 137 VSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQL----GVSSPNDLQQSNTP 185
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P R+ L + V+ IACG +H +++ VF WG + GQLG A P ++
Sbjct: 183 NTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAY--PTQL 240
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L LGV ++ G S T +G ++ G GQ+G H S +E
Sbjct: 241 KTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLG------------HGFSSNEML 288
Query: 138 DSQNIKVV-----DVACGSRHTLALCDDN-SLWGCGWNEYNQL 174
++++ VACG+RHTLAL ++G G QL
Sbjct: 289 PRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQL 331
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WGN S GQLG + + P I V QI+ G H+ T G +YA G
Sbjct: 3 LYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGS 62
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ Q+G E + P+ E Q+ + +ACGSRH++AL + ++ G N
Sbjct: 63 NDYSQLGHE------LPTKRPLQIPE---LQDYVITQIACGSRHSMALSEWGQVFSWGDN 113
Query: 170 EYNQL 174
E QL
Sbjct: 114 ECGQL 118
>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
SB210]
Length = 1146
Score = 90.5 bits (223), Expect = 5e-16, Method: Composition-based stats.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 17/153 (11%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV 85
F + V +ACG H LALT V+SWG ++G S +P I+ L+ GV
Sbjct: 629 FKGIKVLQVACGDYHTLALTDTDQVYSWGGTLHKKVGQRSG------KPAPIQQLNKKGV 682
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL----VVHDPHPMSWSEDFDSQN 141
+Q+ G +HSAA TQ+G +Y WG GGQ +G+L L + +P + + E
Sbjct: 683 IQVDCGDYHSAAITQNGDIYTWG--GGGQDYNKGQLGLGHVKDIENPEKLKFFE-----G 735
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
K+V V+CG HT+AL +N L+G G E+ +L
Sbjct: 736 KKIVKVSCGQFHTMALTSENELFGWGAGEFGEL 768
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANMEP 74
P ++ F + ++CG H +ALT E +F WG G G+LG Y N
Sbjct: 727 PEKLKFFEGKKIVKVSCGQFHTMALTSENELFGWGAGEFGELGTSKHEYTPIRVKVNFNQ 786
Query: 75 REI---RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
I L + I GG H+ T +G++Y+ G+ GQ+G+ + +
Sbjct: 787 YNILYENILFENSIQNIKCGGHHTLLLTNNGYIYSSGYGRQGQLGLRNSENQC---EFQL 843
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
W+ K++ +A G H+LAL D N ++ CG QL +G
Sbjct: 844 VWT----LTKKKIIKIAAGWNHSLALSDQNDIFACGHGARGQLGLG 885
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+F+WG G+L + + +P + L + + QIS HSA + +G LY G
Sbjct: 545 IFAWGKNESGELSFGNQKQPFYNKPENPKNLDRIYIKQISTSQNHSACISANGELYVCGS 604
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G++G+E +L + + + F + IKV+ VACG HTLAL D + ++ G
Sbjct: 605 ALHGKLGLE---ELTMANINKFQMIPIF--KGIKVLQVACGDYHTLALTDTDQVYSWG 657
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 20/180 (11%)
Query: 7 SGPLKMLSQ---VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
SG L +Q ++ P + + + I+ +H ++ G ++ G+ G+LG
Sbjct: 553 SGELSFGNQKQPFYNKPENPKNLDRIYIKQISTSQNHSACISANGELYVCGSALHGKLGL 612
Query: 64 PSSGTDANMEPRE-IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKL 121
T AN+ + I G+ V+Q++ G +H+ A T +Y+WG +VG GK
Sbjct: 613 EEL-TMANINKFQMIPIFKGIKVLQVACGDYHTLALTDTDQVYSWGGTLHKKVGQRSGK- 670
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWNEYNQLSMGCG 179
P P+ + + + V+ V CG H+ A+ + + WG G +YN+ +G G
Sbjct: 671 ------PAPI---QQLNKKG--VIQVDCGDYHSAAITQNGDIYTWGGGGQDYNKGQLGLG 719
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ DA PR I+
Sbjct: 75 PEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTT-EDAVAVPRVIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WHS A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 30/167 (17%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG H LAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G +S
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG--------------LSDE 227
Query: 135 EDFDS-------QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
ED +S + KVV ++CG HT L ++ G QL
Sbjct: 228 EDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 82/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G H+ A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHNLALSDRGQLFSWGAGSDGQLGLMTTED-AVAVPRVI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H+LAL D + G N + QL +G
Sbjct: 143 SCGNWHSLALAADGQFFTWGKNSHGQLGLG 172
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S + P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKY 361
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSVMT-RLSVPEHVKNC 198
+V + G T LC +NS + NQ ++ ++ R + EH
Sbjct: 362 HIVKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNAN 421
Query: 199 PI---VKLF--AEHWNSARL--SVPEHAKDS 222
I V++ A WN + L + EH K S
Sbjct: 422 TINGVVQILSSAACWNGSFLEKKIDEHFKTS 452
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + + P + D Q+I V VACG H LAL D L+ G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--VHVACGESHNLALSDRGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
QL + V+V V + + I+++ +W+S L+
Sbjct: 115 QLGLMTTEDAVAVP---RVIQKLNQQTILQVSCGNWHSLALA 153
>gi|406699214|gb|EKD02424.1| poly(a)+ RNA transport protein [Trichosporon asahii var. asahii CBS
8904]
Length = 651
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG--YPSSGTDANMEPRE 76
P + + + D+ACG DH LALT +G V+ WGNG + QLG + A +EP
Sbjct: 316 TPMELPALARVEIVDVACGADHVLALTSDGYVYVWGNGQQNQLGRRILARRAAAGLEPER 375
Query: 77 IRALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ GL VV ++AG +HS A ++G ++AWG N GQ G++ ++++ P ++
Sbjct: 376 L----GLRNVVHVAAGMFHSFAVDKNGDVWAWGLNTYGQTGLDSSEEMIIR-PQKVTALS 430
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ +VV + G H+L L D+ +WG G + N+L +
Sbjct: 431 PKEHGGARVVQIEGGDAHSLFLFDNGEVWGVGRQDGNELGL 471
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-----PSSGTDANMEPRE--------I 77
+ IA G H LA+ + G SWG LG P + P E +
Sbjct: 201 IESIAAGGMHTLAVDEAGHTRSWGINDNAALGRNTANQPDPENPGSTLPAEDFETWPFVV 260
Query: 78 RAL--SGLGVVQISAGGWHSAARTQDGFLYAWG--WNNGGQVGVEGKLDLVVHDPHPMSW 133
+AL G V+++AG S A + +G L AWG +N G +G +G + H +
Sbjct: 261 KALEDEGFRAVKVAAGDSVSVALSAEGGLRAWGSFRSNEGILGFDG---VPGHPKFQFTP 317
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
E +++VDVACG+ H LAL D ++ G + NQL
Sbjct: 318 MELPALARVEIVDVACGADHVLALTSDGYVYVWGNGQQNQL 358
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 23/150 (15%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPR------------EIRALSGLGVVQISAGGWHSAA 97
+F WG G GQ G D P+ E+ A +G G+ I+AGG H+ A
Sbjct: 155 LFVWGTGDMGQFGTGPDDLDEKPRPQIHKWIEEHREDGELGAGTG-GIESIAAGGMHTLA 213
Query: 98 RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS----------QNIKVVDV 147
+ G +WG N+ +G +P +EDF++ + + V V
Sbjct: 214 VDEAGHTRSWGINDNAALGRNTANQPDPENPGSTLPAEDFETWPFVVKALEDEGFRAVKV 273
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
A G ++AL + L G N+ +G
Sbjct: 274 AAGDSVSVALSAEGGLRAWGSFRSNEGILG 303
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA--LSGLGVVQI 88
+ I+ G H LA+++ G V++WG G++GQLG S +A++ P +R+ L V
Sbjct: 576 IARISAGTRHNLAVSKSGHVYAWGLGNQGQLGL-GSVEEASV-PTLVRSKQLRPYDAVDC 633
Query: 89 SAGGWH 94
SAGG H
Sbjct: 634 SAGGQH 639
>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
terrestris]
Length = 539
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+PS ++ + V DIACG H LALT +G V++WG+ GQ+G + + P+ +
Sbjct: 126 IPSALN---NEFVVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLH 182
Query: 79 -ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G VV IS G S A T +G +Y+WG N GQ+G+ +P ++
Sbjct: 183 IVLNGKKVVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGIGNCTSQA--EPQKVA----- 235
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
I + V CG HTLAL D+ L+ G N Y QL + S V + T+L VPE +
Sbjct: 236 TFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLNTD-SNVWIPTKLQVPEMGR- 293
Query: 198 CPIVKLFAEHWNSARLSVPE 217
I+ + H++ L++ E
Sbjct: 294 --ILDIATSHYHHISLAMSE 311
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI- 77
P +++ V A G H LALT+EG V+SWG +LG + T+ + P I
Sbjct: 70 PKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELG--NRSTNEGLTPTLIP 127
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL+ VV I+ GG HS A T G +YAWG N GQVG L V P P
Sbjct: 128 SALNNEFVVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTILSTV--QPIPKLLHIVL 185
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
+ + KVV ++CG ++A+ D+ ++ G N QL +G SQ
Sbjct: 186 NGK--KVVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGIGNCTSQ 228
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG-GWHSAA 97
+ L +T++ +V+ GN + G LG + T + + P++I AL G V + G G H A
Sbjct: 37 NETLIVTKDDMVYGIGNNTYGCLG--TGDTHSTIYPKKIEALCGKSVKTFAYGKGPHVLA 94
Query: 98 RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
T++G +Y+WG+N+ ++G + + P + + +F VVD+ACG H+LAL
Sbjct: 95 LTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIPSALNNEF------VVDIACGGHHSLAL 148
Query: 158 CDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ ++ G N Q+ G +S V + +L
Sbjct: 149 TNKGEVYAWGHNVSGQVGCGTILSTVQPIPKL 180
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P ++ F +V+ + CG+ H LAL+ EG ++ WG S GQLG TD+N+ P +++
Sbjct: 231 PQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGL---NTDSNVWIPTKLQ 287
Query: 79 ALSGLGVVQISAGGWH--SAARTQDGFLYAWGWNNGGQVGV 117
++ I+ +H S A ++ ++ WG G + V
Sbjct: 288 VPEMGRILDIATSHYHHISLAMSEGNRIFMWGQCLGQSIKV 328
>gi|402914058|ref|XP_003919452.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Papio
anubis]
gi|402914060|ref|XP_003919453.1| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Papio
anubis]
Length = 376
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 35/179 (19%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLTMA 213
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQV------------------------GVEGKLD 122
+++AGGWHS ++ G +Y WGWN GQ+ G + K
Sbjct: 214 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRT 273
Query: 123 LVVHD--PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V D P P + F + V V+CGSRHT + L+ GW +Y QL
Sbjct: 274 GRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQL 332
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 47/174 (27%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ L + ++A G H + +++ G ++ WG GQL P+ D RE
Sbjct: 201 PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 260
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G V++S G H+A T+ G
Sbjct: 261 TGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGE 320
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS---EDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E D + W E F + ++V V CG +T
Sbjct: 321 LYTWGWGKYGQLGHE--------DTTSLDWPRRVEYFVDKQLQVKAVTCGPWNT 366
>gi|401888171|gb|EJT52136.1| poly(a)+ RNA transport protein [Trichosporon asahii var. asahii CBS
2479]
Length = 651
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG--YPSSGTDANMEPRE 76
P + + + D+ACG DH LALT +G V+ WGNG + QLG + A +EP
Sbjct: 316 TPMELPALARVEIVDVACGADHVLALTSDGYVYVWGNGQQNQLGRRILARRAAAGLEPER 375
Query: 77 IRALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ GL VV ++AG +HS A ++G ++AWG N GQ G++ ++++ P ++
Sbjct: 376 L----GLRNVVHVAAGMFHSFAVDKNGDVWAWGLNTYGQTGLDSSEEMIIR-PQKVTALS 430
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ +VV + G H+L L D+ +WG G + N+L +
Sbjct: 431 PKEHGGARVVQIEGGDAHSLFLFDNGEVWGVGRQDGNELGL 471
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-----PSSGTDANMEPRE--------I 77
+ IA G H LA+ + G SWG LG P + P E +
Sbjct: 201 IESIAAGGMHTLAVDEAGHTRSWGINDNAALGRNTANQPDPENPGSTLPAEDFETWPFVV 260
Query: 78 RAL--SGLGVVQISAGGWHSAARTQDGFLYAWG--WNNGGQVGVEGKLDLVVHDPHPMSW 133
+AL G V+++AG S A + +G L AWG +N G +G +G + H +
Sbjct: 261 KALEDEGFRAVKVAAGDSVSVALSAEGGLRAWGSFRSNEGILGFDG---VPGHPKFQFTP 317
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
E +++VDVACG+ H LAL D ++ G + NQL
Sbjct: 318 MELPALARVEIVDVACGADHVLALTSDGYVYVWGNGQQNQL 358
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 23/150 (15%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPR------------EIRALSGLGVVQISAGGWHSAA 97
+F WG G GQ G D P+ E+ A +G G+ I+AGG H+ A
Sbjct: 155 LFVWGTGDMGQFGTGPDDLDEKPRPQIHKWIEEHREDGELGAGTG-GIESIAAGGMHTLA 213
Query: 98 RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS----------QNIKVVDV 147
+ G +WG N+ +G +P +EDF++ + + V V
Sbjct: 214 VDEAGHTRSWGINDNAALGRNTANQPDPENPGSTLPAEDFETWPFVVKALEDEGFRAVKV 273
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
A G ++AL + L G N+ +G
Sbjct: 274 AAGDSVSVALSAEGGLRAWGSFRSNEGILG 303
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA--LSGLGVVQI 88
+ I+ G H LA+++ G V++WG G++GQLG S +A++ P +R+ L V
Sbjct: 576 IARISAGTRHNLAVSKSGHVYAWGLGNQGQLGL-GSVEEASV-PTLVRSKQLRPYDAVDC 633
Query: 89 SAGGWH 94
SAGG H
Sbjct: 634 SAGGQH 639
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + + G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLG 172
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++EG F WG GQLG G D +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGL---GIDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 ASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 K-----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 7/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++CG H LAL +G V++WG S GQLG S + PR I++LS + +VQ++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS-EECIRVPRNIKSLSDIQIVQVAC 144
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HS A +++G + WG N GQ+G+ +D + S I + VA G
Sbjct: 145 GYYHSLALSKEGEFFCWGQNKYGQLGL--GIDCKKQASPQLIKS----LLGIPFMQVAAG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ L +++G G N++ QL +
Sbjct: 199 GAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4064 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4121
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4122 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4179
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4180 LEGY-----QIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAKSS 4226
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4173 LPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4230
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4231 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4278
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4279 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4323
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4279 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4336
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4337 LQGKNVRQISAGRCHSAA 4354
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
>gi|410907970|ref|XP_003967464.1| PREDICTED: RCC1 domain-containing protein 1-like [Takifugu
rubripes]
Length = 308
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 28/172 (16%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L +A +H + L+ G V++WG GS GQLG+ + +PR + AL G+ +V +
Sbjct: 95 LKAKSVAVSAEHVMLLSATGAVYTWGLGSHGQLGH--GVLTSEEKPRAVEALWGMPMVCV 152
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK--LDLVVHDPHPMSWSEDFD-------- 138
+ GGWHS + G LY WGWN GQ+G+ + + P + S +
Sbjct: 153 ATGGWHSVCISDGGDLYVWGWNESGQLGLPSRSLRKTLPQQSSPKAGSSSTEETQEGDKH 212
Query: 139 ----------------SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
S + +++ V+CGSRHT A+ L+ CGW +Y QL
Sbjct: 213 EEVFISIQAFPALLDVSPSCEIMAVSCGSRHTAAVTTTGDLYTCGWGDYGQL 264
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 50/174 (28%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-------------- 65
P ++ + + +A G H + ++ G ++ WG GQLG PS
Sbjct: 138 PRAVEALWGMPMVCVATGGWHSVCISDGGDLYVWGWNESGQLGLPSRSLRKTLPQQSSPK 197
Query: 66 SGTDANMEPRE----------IRALSGL-------GVVQISAGGWHSAARTQDGFLYAWG 108
+G+ + E +E I+A L ++ +S G H+AA T G LY G
Sbjct: 198 AGSSSTEETQEGDKHEEVFISIQAFPALLDVSPSCEIMAVSCGSRHTAAVTTTGDLYTCG 257
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSED-------FDSQNIKVVDVACGSRHTL 155
W + GQ+G HP S D F Q ++VVDV CG+ +T
Sbjct: 258 WGDYGQLG------------HPTLKSTDEPQLVEFFKKQQMRVVDVVCGAWNTF 299
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 98/176 (55%), Gaps = 12/176 (6%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4053 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4110
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4111 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4168
Query: 134 SEDF---DSQNIKVV-DVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++N ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4169 LEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4224
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 20/154 (12%)
Query: 30 VVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
++ +ACG +H LA++ +G +V+++G+G G+LG +S A P+++ L G+G+ ++
Sbjct: 4182 IICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKVDVLCGIGIKKV 4239
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ-----NIK 143
+ G S A T+DG +Y +G D ++ P + + + Q +
Sbjct: 4240 ACGTQFSVALTKDGQVYTFGQ------------DRLIGLPEGRARNHNRPQQVPVLAGVV 4287
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ DVA G+ HTLAL ++ G N QL +G
Sbjct: 4288 IEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLG 4321
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++D + + +ACG +ALT++G V+++G +G P + P+++
Sbjct: 4225 PQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRL--IGLPEGRARNHNRPQQVPV 4282
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
L+G+ + ++ G H+ A T G +YAWG N+ GQ+G+
Sbjct: 4283 LAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGL 4320
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S + T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLSLTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LALT G +++WG+ S GQLG T+ EP +
Sbjct: 4277 PQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGL--GHTNHVREPTLVTV 4334
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4335 LQGKNVRQISAGRCHSAA 4352
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + Q+SAG HS A T +D + AW
Sbjct: 715 LDGIAIQQVSAGTSHSLAWTALPRDRQVVAW 745
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G L+LT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + V+ G+ H+LA
Sbjct: 717 ---GIAIQQVSAGTSHSLA 732
>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 992
Score = 90.1 bits (222), Expect = 6e-16, Method: Composition-based stats.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 12/146 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANMEPREIRALSGLGVVQI 88
V IACG H +ALT +G +F WG + GQLG +GT + PR +++L G+ V QI
Sbjct: 120 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQS---PRHLQSLCGIPVAQI 176
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
SAGG HS + G ++ WG N+ GQ+G+ D V P ++ + K+V ++
Sbjct: 177 SAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFV--PTVVN-----SLKRKKIVSIS 229
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
CG HT AL +++ G + QL
Sbjct: 230 CGGEHTAALAKGGTVFTFGSGGFGQL 255
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 54/166 (32%), Positives = 73/166 (43%), Gaps = 14/166 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + V I+ G +H L+ G+VF WG S GQLG T P + +
Sbjct: 162 PRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGL--GDTTDRFVPTVVNS 219
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V IS GG H+AA + G ++ +G GQ+G D + HP +E + S
Sbjct: 220 LKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKD----EHHPRLVAELWGS 275
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCGWNEYNQLSMGCGVSQ 182
KV V CG HTL L +GCG QL G V Q
Sbjct: 276 ---KVSQVTCGRNHTLVSTASPKLIYSFGCGMQ--GQLGNGEQVKQ 316
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
D + E ++ L V+QI+ G HS A T DG L+ WG N GQ+G+ +
Sbjct: 104 DKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPR 163
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
H S I V ++ G H+ L ++G G N QL +G
Sbjct: 164 HLQSLC------GIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLG 206
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 7/156 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIR 78
P + +T + CG H +A++ +G+VF+WG+ S GQ+G S + P+ ++
Sbjct: 76 PESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLK 135
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L+ + VVQI+ G HS A T G L+ WG N+ GQ+G+ GK + +P P+
Sbjct: 136 GLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGI-GKTHSSMSEPAPV-----LS 189
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + ++ G H+ AL +L+G G NEY QL
Sbjct: 190 LNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQL 225
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
K+ +V +P + + V IACG +H +ALT G +F WG+ S GQLG + +
Sbjct: 122 KVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSM 181
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
+ EP + +L+G+ + ISAGG HS A + G L+ WG N GQ+GV D P P
Sbjct: 182 S-EPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTD----RPLP 236
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
+ + SQ V V+CG +HT L D + +GCG
Sbjct: 237 -TLLKSLRSQG--VCYVSCGEKHTAVLTSDGGVFTFGCG 272
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +++CG++H L ++G V++ G+ GQLG S T+ P + A+ + +++
Sbjct: 37 VREVSCGWNHTAFLCKDGTVYTCGSNEFGQLGQEKSHTN----PESVHAIETFTITKVTC 92
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+ A + G ++AWG N+ GQ+G+ K+ V M + VV +ACG
Sbjct: 93 GKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKG----LAKMSVVQIACG 148
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
H++AL L+ G N QL +G
Sbjct: 149 CNHSMALTISGHLFCWGDNSSGQLGIG 175
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW-HSAARTQDGFLYAWG 108
+F WG S GQLG + + PR + L V+ + GW H+A +DG +Y G
Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N GQ+G E +P + E F + V CG HT+A+ D ++ G
Sbjct: 61 SNEFGQLGQEKSHT----NPESVHAIETF-----TITKVTCGKAHTVAVSDQGLVFAWGD 111
Query: 169 NEYNQLSMGCGVSQ 182
N Y Q+ +G V +
Sbjct: 112 NSYGQIGLGSKVKE 125
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + V ++CG H LT +G VF++G G+ GQLG+ S+ + PR++
Sbjct: 235 LPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYT--PRKVF 292
Query: 79 ALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H+ A G +Y +G GQ+G+
Sbjct: 293 ELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGL 332
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALT-QEGIVFSWGNGSRGQLG 62
+ P ++ + VVT IACG H LAL G V+++G G GQLG
Sbjct: 286 YTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLG 331
>gi|302823907|ref|XP_002993601.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
gi|300138529|gb|EFJ05293.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
Length = 441
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRALSGLGVVQIS 89
V + CG H A+ G V++WG GS GQLG+ S + + PR + L G+ VVQIS
Sbjct: 211 VKQVVCGEYHTAAIAHNGDVYTWGLGSSGQLGHRSLQSGNKEVFPRRVVTLEGVDVVQIS 270
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV-- 147
AGG HS A + G LY WG ++ GQ+G+ + D + DF Q I V+ +
Sbjct: 271 AGGVHSCAISSAGGLYMWGGSHAGQLGLGPRQDRICGTSDI-----DFFFQRIPVLVIPS 325
Query: 148 -----ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL + L GCG+N Y Q G
Sbjct: 326 GARSATCGDLHTLVRMANGRLLGCGYNSYGQADSG 360
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 25/171 (14%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S V H H L + I+CG +H A+ +G +F+WG+ GQLG G++ N +
Sbjct: 31 SAVPHPIRVAIHPSSLRLIAISCGLEHTAAIASDGSLFTWGSNQFGQLG---DGSETNSD 87
Query: 74 -PREIRALSGLGVVQISAGGWHSAA------RTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
P+ + L V ++ G +AA T G ++ WG N G
Sbjct: 88 RPKRVYGLRDEAVKSVACGANCTAAIADSRDGTCRGRMWIWGQNQGSN------------ 135
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P +S F S + V+ VACG H AL + L G+NE+ QL G
Sbjct: 136 --SPRLFSGVFSSSTV-VIQVACGGAHAAALSEHGVLQTWGYNEHGQLGRG 183
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
LYAWG+N GQ G E + V PHP+ + +++++ ++CG HT A+ D SL
Sbjct: 12 LYAWGYNQCGQAGQESAIHSAV--PHPIRVA--IHPSSLRLIAISCGLEHTAAIASDGSL 67
Query: 164 WGCGWNEYNQLSMG 177
+ G N++ QL G
Sbjct: 68 FTWGSNQFGQLGDG 81
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P
Sbjct: 20 EIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKP 75
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
++ AL +V +S G H+ A G +YAWG ++ GQ+G++G + + + S S
Sbjct: 76 EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 136 D------IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L+ + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIE-CQ 176
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PN 234
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 235 LL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Equus caballus]
Length = 4860
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4066 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4123
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4124 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4181
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4182 LEGY-----QIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSS 4228
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4175 LPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4232
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4233 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4280
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4281 PQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4325
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLV---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4281 PQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4338
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4339 LQGKNIRQISAGRCHSAA 4356
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ +
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLV 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLVEELAATRIVDI 670
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 5/163 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + LD VV IACG H +AL++ G V SWG+ GQLG ++ D P+ +R
Sbjct: 81 PLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLG-QATDQDIVQLPKIVRQ 139
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VVQI+ G HS A T G LY+WG N GQ+GV + V H P+ +
Sbjct: 140 LVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNTPKE-VTHSNQPVRLTTLL-- 196
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
I V +ACG H+ + ++++G G N QL + S+
Sbjct: 197 -GIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSR 238
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 12/171 (7%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANME 73
+ +P + + V IACG +H LALT G ++SWG+ GQLG P T +N +
Sbjct: 130 IVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNTPKEVTHSN-Q 188
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + L G+ V I+ GG HS ++ ++ WG NN GQ+G ++D S+
Sbjct: 189 PVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLG--------LNDETSRSY 240
Query: 134 SEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+ + + V VACG ++ L ++ ++ CG Y QL G G +++
Sbjct: 241 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEM 291
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANMEPREI 77
PS++ D + +ACG H L LT G V++ G+ QLG+ P+ P I
Sbjct: 31 PSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACGSNDHSQLGHDLPTK------RPLLI 84
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L VVQI+ G HS A ++ G + +WG N+ GQ+G D +V P +
Sbjct: 85 PELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLGQATDQD-IVQLPKIVR----- 138
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ VV +ACG+ H+LAL L+ G N Y QL
Sbjct: 139 QLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 175
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P R+ L + V IACG +H +++ VF WG + GQLG + + P ++
Sbjct: 187 NQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSY--PTQL 244
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L LGV ++ G S T +G ++ G GQ+G ++ P E
Sbjct: 245 KTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG----HGFGANEMLPRMVMELM 300
Query: 138 DSQNIKVVDVACGSRHTLALCDDN-SLWGCGWNEYNQL 174
S + VACG+RHTLAL ++G G QL
Sbjct: 301 GS---TITQVACGNRHTLALVPSRGRVYGFGLGSSGQL 335
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WGN S GQLG + + P ++ + Q++ G H+ T G +YA G
Sbjct: 7 LYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACGS 66
Query: 110 NNGGQVGVEGKLDLVVHD---PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
N+ Q+G HD P+ E D VV +ACGSRH++AL + +
Sbjct: 67 NDHSQLG---------HDLPTKRPLLIPELLD---YVVVQIACGSRHSMALSEWGQVLSW 114
Query: 167 GWNEYNQL 174
G N+ QL
Sbjct: 115 GDNDCGQL 122
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4056 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4113
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4114 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4171
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4172 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4218
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4165 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4222
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4223 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4270
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4271 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4315
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4271 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4328
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4329 LQGKNVRQISAGRCHSAA 4346
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ +G +FSWG GS GQLG+ ++ D+ PR I+
Sbjct: 76 PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTT-EDSVAIPRLIKK 134
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N GQ+G+ + P S
Sbjct: 135 LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEF------PSQASPQRVKSL 188
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 189 EGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGL 225
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + ++ ++CG HC+AL +G F+WG GQLG +PS + P
Sbjct: 128 IPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS-----P 182
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +++L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 183 QRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDR--QSPCHVKL- 239
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G + QL
Sbjct: 240 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQL 275
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
L + P D + ++ACG +H + L ++G V++ G+ ++GQLG+ G
Sbjct: 19 LQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGN---- 74
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P +I AL+ +V ++ G HS A + G L++WG + GQ+G D V P +
Sbjct: 75 KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVA-IPRLI- 132
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + Q I + V+CG+ H +AL D + G N + QL +G
Sbjct: 133 --KKLNQQMI--LQVSCGNWHCMALAADGQFFTWGQNRHGQLGLG 173
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S TD P ++
Sbjct: 182 PQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGL-SDETD-RQSPCHVKL 239
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 240 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV----NPRRVLELMGS 295
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 296 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 323
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 91/214 (42%), Gaps = 21/214 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 245 VVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 302
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-------SEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P W S DS
Sbjct: 303 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSFKY 362
Query: 143 KVVD-VACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSVMT-RLSVPEHVKNC 198
+V + G T LC +NS + NQ ++ ++ R + EH +
Sbjct: 363 HIVKHIFSGGDQTFVLCSKYENSSPADDFRIMNQAQYTSLINDETIAIWRQKLSEHSNSN 422
Query: 199 PIVKLF-----AEHWNSARL--SVPEHAKDSSIV 225
I + A WN + L + EH K S +
Sbjct: 423 SINGVLQILSSAACWNGSFLEKKIDEHFKTSPKI 456
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ WG S G G SS + EP+ +S + +++ GG HS +DG +Y G
Sbjct: 1 MLCWGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCG 60
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGC 166
N GQ+G E + + P + D +V VACG H+LAL D L WG
Sbjct: 61 SNTKGQLGHEREGN----KPEQIGALAD-----QHIVHVACGESHSLALSDQGQLFSWGA 111
Query: 167 G 167
G
Sbjct: 112 G 112
>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
Length = 1199
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Query: 7 SGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS 66
+G L H P +D + V +ACG HC+ALT+EG + SWG+ ++GQLG SS
Sbjct: 110 NGELMCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSS 169
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
+ +EP I +L+ + QI AG +HS + G L+ WG NN GQ+G G D
Sbjct: 170 EIEF-LEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLG-HGNSDSFQS 227
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN 169
P + ++ +VV VA G H++ + + WG G N
Sbjct: 228 SPRLVK-----TLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGN 267
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 23/188 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA G H + LT V+S G+ GQLG S P + + ++A
Sbjct: 33 VISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQQKS----QCRPSLVTGFGAEEIFHVAA 88
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP----HPMSWSEDFDSQNIKVVD 146
G + S A + G L+ WG + G++ + +H+P M WS VV
Sbjct: 89 GDFFSIAIAESGLLFGWGRSLNGELMCKQD---SLHEPKLLDKIMHWS---------VVQ 136
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAE 206
VACG++H +AL ++ ++ G N QL G G S++ + ++ + PI ++ A
Sbjct: 137 VACGAQHCIALTEEGTILSWGSNTQGQL--GLGSSEIEFL-EPTIIASLNAFPISQICAG 193
Query: 207 HWNSARLS 214
++S LS
Sbjct: 194 AYHSGVLS 201
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQIS 89
V +A G +H + T+ G VFSWG+G GQLG+ S AN+ +P++I L G V QI
Sbjct: 240 VVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSM---ANVTQPKKIMELMGTTVCQIC 296
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
G H+ + T L +G N+ Q+G + P+S ++D
Sbjct: 297 CGRRHTISLTDKRKLLGFGLNSNNQLGTHNDTSARLPITIPISLTDD 343
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS + F + +A G +A+ + G++F WG G+L D+ EP+ +
Sbjct: 72 PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGEL---MCKQDSLHEPKLLDK 128
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+ VVQ++ G H A T++G + +WG N GQ+G+ G ++ +P ++ F
Sbjct: 129 IMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGL-GSSEIEFLEPTIIASLNAF-- 185
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + G+ H+ L +L+ G N + QL G
Sbjct: 186 ---PISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHG 220
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+Y WG N+ GQ+G+ G ++++ P P+ N V+ +A G RHT+ L +
Sbjct: 1 MYGWGKNDYGQLGL-GSENMLISCPSPID-------ANQSVISIASGLRHTVYLTSTRKV 52
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
+ CG NE+ QL + S++T E
Sbjct: 53 YSCGSNEFGQLGQQKSQCRPSLVTGFGAEE 82
>gi|12844231|dbj|BAB26286.1| unnamed protein product [Mus musculus]
gi|148700107|gb|EDL32054.1| hect domain and RLD 4, isoform CRA_d [Mus musculus]
Length = 233
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 10/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++ P R D F++ V D+ CG H + + +G V++ G GQLG+ S +
Sbjct: 19 EEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKK 74
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++ AL +V ++ G H+ A G +YAWG ++ GQ+G++G + + + S
Sbjct: 75 PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S+ I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 135 SD------IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG G D +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GIDCQKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+ WGN S GQLG + +EPR V + G H+ DG +Y G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ GQ+G E P + D+QNI V VACG HTLAL D ++ G +
Sbjct: 61 NDLGQLGHEKSR----KKPEQVV---ALDAQNI--VAVACGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGLQ-GSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4067 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4124
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4183 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4176 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4233
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4234 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4281
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4282 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4282 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4339
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4340 LQGKNIRQISAGRCHSAA 4357
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
Length = 1048
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Query: 7 SGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS 66
+G L H P +D + V +ACG HC+ALT+EG + SWG+ ++GQLG SS
Sbjct: 110 NGELMCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSS 169
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
+ +EP I +L+ + QI AG +HS + G L+ WG NN GQ+G G D
Sbjct: 170 EIEF-LEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLG-HGNSDSFQS 227
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN 169
P + ++ +VV VA G H++ + + WG G N
Sbjct: 228 SPRLVK-----TLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGN 267
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 23/188 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA G H + LT V+S G+ GQLG S P + + ++A
Sbjct: 33 VISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQQKS----QCRPSLVTGFGAEEIFHVAA 88
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP----HPMSWSEDFDSQNIKVVD 146
G + S A + G L+ WG + G++ + +H+P M WS VV
Sbjct: 89 GDFFSIAIAESGLLFGWGRSLNGELMCKQD---SLHEPKLLDKIMHWS---------VVQ 136
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAE 206
VACG++H +AL ++ ++ G N QL G G S++ + ++ + PI ++ A
Sbjct: 137 VACGAQHCIALTEEGTILSWGSNTQGQL--GLGSSEIEFLEP-TIIASLNAFPISQICAG 193
Query: 207 HWNSARLS 214
++S LS
Sbjct: 194 AYHSGVLS 201
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQIS 89
V +A G +H + T+ G VFSWG+G GQLG+ S AN+ +P++I L G V QI
Sbjct: 240 VVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSM---ANVTQPKKIMELMGTTVCQIC 296
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
G H+ + T L +G N+ Q+G + P+S ++D
Sbjct: 297 CGRRHTISLTDKRKLLGFGLNSNNQLGTHNDTSARLPITIPISLTDD 343
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS + F + +A G +A+ + G++F WG G+L D+ EP+ +
Sbjct: 72 PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGEL---MCKQDSLHEPKLLDK 128
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+ VVQ++ G H A T++G + +WG N GQ+G+ G ++ +P ++ F
Sbjct: 129 IMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGL-GSSEIEFLEPTIIASLNAF-- 185
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + G+ H+ L +L+ G N + QL G
Sbjct: 186 ---PISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHG 220
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+Y WG N+ GQ+G+ G ++++ P P+ N V+ +A G RHT+ L +
Sbjct: 1 MYGWGKNDYGQLGL-GSENMLISCPSPID-------ANQSVISIASGLRHTVYLTSTRKV 52
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
+ CG NE+ QL + S++T E
Sbjct: 53 YSCGSNEFGQLGQQKSQCRPSLVTGFGAEE 82
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4076 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4133
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4134 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4191
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4192 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4238
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4185 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4242
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4243 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4290
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4291 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4335
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELAATRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H L+L DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCL+L+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4291 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4348
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4349 LQGKNIRQISAGRCHSAA 4366
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H + + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4065 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4122
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4123 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4180
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4181 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4227
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4174 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4231
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4232 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4279
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELAATRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H L+L DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCL+L+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4337
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4338 LQGKNIRQISAGRCHSAA 4355
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H + + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Pongo abelii]
Length = 4864
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4070 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4127
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4128 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4185
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4186 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4232
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4179 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4236
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4237 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4284
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4285 PQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4329
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4285 PQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4342
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4343 LQGKNVRQISAGRCHSAA 4360
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4065 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4122
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4123 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4180
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4181 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4227
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4174 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4231
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4232 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4279
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELAATRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H L+L DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCL+L+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4337
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4338 LQGKNIRQISAGRCHSAA 4355
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H + + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4060 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4117
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4118 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4175
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4176 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4222
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4169 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4226
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4227 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4274
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4275 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4319
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4275 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4332
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4333 LQGKNVRQISAGRCHSAA 4350
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4067 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4124
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4183 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4176 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4233
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4234 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4281
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4282 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4282 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4339
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4340 LQGKNVRQISAGRCHSAA 4357
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 3314
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 2520 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 2577
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 2578 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 2635
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 2636 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 2682
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 2629 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 2686
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 2687 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 2734
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 2735 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 2779
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 2735 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 2792
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 2793 LQGKNVRQISAGRCHSAA 2810
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4067 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4124
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4183 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4176 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4233
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4234 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4281
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4282 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4282 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4339
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4340 LQGKNIRQISAGRCHSAA 4357
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4030 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4087
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4088 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4145
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4146 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4192
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4139 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4196
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4197 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4244
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4245 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4289
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4245 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4302
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4303 LQGKNVRQISAGRCHSAA 4320
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4065 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4122
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4123 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4180
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4181 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4227
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4174 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4231
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4232 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4279
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELAATRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H L+L DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCL+L+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4337
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4338 LQGKNIRQISAGRCHSAA 4355
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H + + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4052 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4109
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4110 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4167
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4168 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4214
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4161 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4218
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4219 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4266
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4267 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4311
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4267 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4324
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4325 LQGKNVRQISAGRCHSAA 4342
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4067 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4124
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4183 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4176 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4233
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4234 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4281
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4282 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4326
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ + AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVVEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSXCLALRHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4282 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4339
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4340 LQGKNIRQISAGRCHSAA 4357
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVVEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G CLAL + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G A D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4065 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4122
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4123 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4180
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4181 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4227
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4174 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4231
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4232 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4279
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4337
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4338 LQGKNVRQISAGRCHSAA 4355
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 3708 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 3765
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 3766 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 3823
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 3824 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 3870
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 3817 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 3874
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 3875 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 3922
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 3923 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 3967
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 3923 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTVVTG 3980
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 3981 LQGKNVRQISAGRCHSAA 3998
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAA 97
L G+ + QISAG HS A
Sbjct: 715 LDGIAIQQISAGTSHSLA 732
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4062 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4119
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4120 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4177
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4178 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4224
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4171 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4228
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4229 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4276
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4277 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4321
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4277 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4334
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4335 LQGKNVRQISAGRCHSAA 4352
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4059 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4116
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4117 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4174
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4175 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4221
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4168 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4225
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4226 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4273
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4274 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4318
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4274 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4331
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4332 LQGKNVRQISAGRCHSAA 4349
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4066 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4123
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4124 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4181
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4182 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4228
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4175 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4232
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4233 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4280
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4281 PQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4325
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4281 PQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4338
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4339 LQGKNVRQISAGRCHSAA 4356
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
Length = 4860
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4066 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4123
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4124 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4181
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4182 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4228
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4175 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4232
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4233 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4280
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4281 PQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4325
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4281 PQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4338
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4339 LQGKNIRQISAGRCHSAA 4356
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
>gi|149043904|gb|EDL97355.1| rCG61079, isoform CRA_d [Rattus norvegicus]
Length = 245
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 10/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++ P + D F++ V D+ CG H + + +G V++ G GQLG+ S +
Sbjct: 19 EEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKK 74
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++ AL +V +S G H+ A G +YAWG ++ GQ+G++G + + + S
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S+ I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 135 SD------IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIE-CQKQTS 180
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4067 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4124
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4183 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4176 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4233
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4234 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4281
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELAATRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4339
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4340 LQGKNVRQISAGRCHSAA 4357
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4065 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4122
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4123 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4180
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4181 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4227
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4174 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4231
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4232 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4279
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELAATRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H L+L DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCL+L+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4337
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4338 LQGKNIRQISAGRCHSAA 4355
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H + + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
>gi|302565090|ref|NP_001180861.1| RCC1 domain-containing protein 1 [Macaca mulatta]
Length = 376
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVVQ 87
L + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL + +
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLTMAE 214
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQV------------------------GVEGKLDL 123
++AGGWHS ++ G +Y WGWN GQ+ G + K
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTG 274
Query: 124 VVHD--PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V D P P + F + V V+CGSRHT + L+ GW +Y QL
Sbjct: 275 RVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQL 332
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 47/174 (27%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ L + ++A G H + +++ G ++ WG GQL P+ D RE
Sbjct: 201 PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 260
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G V++S G H+A T+ G
Sbjct: 261 TGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGE 320
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS---EDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E D + W E F + ++V V CG +T
Sbjct: 321 LYTWGWGKYGQLGHE--------DTTSLDWPRRVEYFVDKQLQVKTVTCGPWNT 366
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4067 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4124
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4183 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4176 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4233
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4234 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4281
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELAATRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4339
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4340 LQGKNVRQISAGRCHSAA 4357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
Length = 3507
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 2713 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 2770
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 2771 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 2828
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 2829 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 2875
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 2822 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 2879
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 2880 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 2927
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 2928 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 2972
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 2928 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 2985
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 2986 LQGKNIRQISAGRCHSAA 3003
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4067 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4124
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4183 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4176 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4233
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4234 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4281
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4282 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4326
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ + AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVVEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4282 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4339
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4340 LQGKNVRQISAGRCHSAA 4357
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVVEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Felis catus]
Length = 4861
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4067 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4124
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4183 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4176 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4233
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4234 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4281
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4282 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4326
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ + AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVVEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4282 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4339
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4340 LQGKNVRQISAGRCHSAA 4357
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVVEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4076 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4133
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4134 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4191
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4192 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4238
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4185 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4242
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4243 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4290
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4291 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4335
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ + AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVVEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4291 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4348
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4349 LQGKNVRQISAGRCHSAA 4366
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVVEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
>gi|380793883|gb|AFE68817.1| RCC1 domain-containing protein 1, partial [Macaca mulatta]
Length = 339
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 81/177 (45%), Gaps = 33/177 (18%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L + G +H L L G VFSWG G GQLG+ + +A +EPR + AL GL + ++
Sbjct: 121 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT--LEAELEPRLLEALQGLTMAEV 178
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQV------------------------GVEGKLDLV 124
+AGGWHS ++ G +Y WGWN GQ+ G + K
Sbjct: 179 AAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGR 238
Query: 125 VHD--PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V D P P + F + V V+CGSRHT + L+ GW +Y QL
Sbjct: 239 VEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQL 295
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 47/174 (27%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ L + ++A G H + +++ G ++ WG GQL P+ D RE
Sbjct: 164 PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 223
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G V++S G H+A T+ G
Sbjct: 224 TGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGE 283
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS---EDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E D + W E F + ++V V CG +T
Sbjct: 284 LYTWGWGKYGQLGHE--------DTTSLDWPRRVEYFVDKQLQVKAVTCGPWNT 329
>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
glaber]
Length = 3493
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 94/174 (54%), Gaps = 10/174 (5%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 2692 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 2749
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 2750 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 2807
Query: 134 SEDFDSQNI--KVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + K VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 2808 LEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSS 2861
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 20/150 (13%)
Query: 34 IACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGG 92
+ACG +H LA++ +G +V+++G+G G+LG +S A P+++ L G+G+ +++ G
Sbjct: 2823 VACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS--TAKSSPQKVDVLCGIGIKKVACGT 2880
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ-----NIKVVDV 147
S A T+DG +Y +G D ++ P + + + Q + + DV
Sbjct: 2881 QFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNRPQQVPVLAGVVIEDV 2928
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
A G+ HTLAL ++ G N QL +G
Sbjct: 2929 AVGAEHTLALASTGDVYAWGSNSEGQLGLG 2958
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++D + + +ACG +ALT++G V+++G +G P + P+++
Sbjct: 2862 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPEGRARNHNRPQQVPV 2919
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
L+G+ + ++ G H+ A G +YAWG N+ GQ+G+
Sbjct: 2920 LAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 2957
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 2914 PQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 2971
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 2972 LQGKNIRQISAGRCHSAA 2989
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L + +P + D+ V +ACG+ H LAL++ G +FSWG GQLG +G
Sbjct: 118 LNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQS 177
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
++ P+ +++L G+ QI+AGG HS A T G ++ WG N GQ+G+ D
Sbjct: 178 ISV-PQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFP--- 233
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + SQ +V+ ++CG HT AL + ++ G Y QL
Sbjct: 234 --ALLKALRSQ--RVIYISCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 7/147 (4%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
++ ++CG H LAL +G VFSWG GS GQLG ++ + PR I++LS + V Q++
Sbjct: 85 IIVALSCGESHTLALNDKGQVFSWGLGSDGQLGL-NNFEECIRVPRNIKSLSDVQVAQVA 143
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G WHS A ++ G +++WG N GQ+G+ G + P + Q I +A
Sbjct: 144 CGYWHSLALSKGGHIFSWGQNRYGQLGL-GMTGQSISVPQHLQ-----SLQGIPFAQIAA 197
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSM 176
G H+ AL +++G G N++ QL +
Sbjct: 198 GGAHSFALTLSGAVFGWGRNKFGQLGL 224
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 16/178 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + F V D+ CG H L ++G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +++WG + GQ+G+ + + P + D
Sbjct: 81 LDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGL-NNFEECIRVPRNIKSLSD--- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
++V VACG H+LAL ++ G N Y QL G G++ S+ SVP+H+++
Sbjct: 137 --VQVAQVACGYWHSLALSKGGHIFSWGQNRYGQL--GLGMTGQSI----SVPQHLQS 186
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L M Q +P + + IA G H ALT G VF WG GQLG + T+
Sbjct: 171 LGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGL--NDTN 228
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
P ++AL V+ IS G H+AA T++G ++ +G GQ+G H
Sbjct: 229 DRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-------NH 281
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLAL 157
++ + F+ V +ACG +HTLA
Sbjct: 282 EVNPRKVFELMGNVVTQIACGRQHTLAF 309
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+ + V I+CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 232 FPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVN--PRKVF 289
Query: 79 ALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVE 118
L G V QI+ G H+ A T G + ++G GQ+G
Sbjct: 290 ELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTR 330
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ G V + G H+A +DG +Y G N+
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+Q I V ++CG HTLAL D ++ G
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQII--VALSCGESHTLALNDKGQVFSWGLG 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL G++ R VP ++K + + ++ +W+S LS
Sbjct: 112 SDGQL----GLNNFEECIR--VPRNIKSLSDVQVAQVACGYWHSLALS 153
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
GTD + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4034 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4091
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4092 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4149
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4150 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4196
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4143 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4200
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4201 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4248
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4249 PQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4293
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4249 PQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4306
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4307 LQGKNIRQISAGRCHSAA 4324
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
GTD + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V +I+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + V + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2441
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 1647 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 1704
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 1705 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 1762
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 1763 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 1809
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 1756 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 1813
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 1814 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 1861
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 1862 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 1906
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 1862 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 1919
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 1920 LQGKNVRQISAGRCHSAA 1937
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V +I+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + V + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + V + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLLK-----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|226482626|emb|CAX73912.1| putative E3 ubiquitin-protein ligase HERC5 [Schistosoma japonicum]
Length = 343
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 79/164 (48%), Gaps = 23/164 (14%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L + + ++CG L LT G VFS G GSRGQLG + E I AL L V
Sbjct: 140 LRIKIKSVSCGLGFLLCLTCSGQVFSQGIGSRGQLGL--GDLNDRTELTIIEALQTLTVT 197
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQ-----VGVEGKLDLVVHD-----------PHP 130
QIS G WHSA T G +Y WGWN GQ +GV KL+ V P P
Sbjct: 198 QISTGHWHSACLTDTGDVYTWGWNEHGQLGHKSLGVSNKLNSVTEQERKSCVSVLSLPTP 257
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ DF + + V V CG HT+ L +D L+ G N++ QL
Sbjct: 258 V----DFPDEPV-VSQVTCGGCHTVCLTEDGILFCFGCNKFGQL 296
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS 66
K V +P+ +D + VV+ + CG H + LT++GI+F +G GQLG+ SS
Sbjct: 246 KSCVSVLSLPTPVDFPDEPVVSQVTCGGCHTVCLTEDGILFCFGCNKFGQLGFDSS 301
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 3996 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4053
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G V+Q+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4054 PRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4111
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4112 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4158
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4105 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4162
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4163 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4210
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + D+A G+ HTLAL ++ G N QL +G
Sbjct: 4211 PQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4255
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ DIA G +H LAL G V++WG+ S GQLG T+ EP I
Sbjct: 4211 PQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLITI 4268
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4269 LQGKNIRQISAGRCHSAA 4286
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + ++ G+ H+LA
Sbjct: 717 ---GVAIQQISAGTSHSLA 732
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
>gi|301121474|ref|XP_002908464.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262103495|gb|EEY61547.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 527
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP----SSGTDA 70
+ + P + L + +ACG H AL ++G VFSWG G G LG+ D
Sbjct: 142 ETANAPRVVQPLLHKRIVQVACGASHSFALAEDGDVFSWGIGRSGALGHGLNVHEQTFDT 201
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
M P E+ AL G VVQI+ G H+AA Q G L G G++G + V D
Sbjct: 202 VMSPMEVLALKGRRVVQIACGDSHTAALLQSGQLLTCGQRGYGRLGRQIANTPDVLDDEY 261
Query: 131 MSW--SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
SW F + +K VACG+ HTL + + L+ GWN QL +G
Sbjct: 262 SSWFGPVVFAKEGVKCTYVACGAAHTLVVAGAHVLYAFGWNSSGQLGVG 310
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
Query: 24 DHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
D L ++ D+ACG H + +++G + +WG + S AN PR ++ L
Sbjct: 98 DVVLSRMLLDVACGDKHGVGASEQGYLLTWGEVFDCRSKTRSEKETANA-PRVVQPLLHK 156
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWSEDFD 138
+VQ++ G HS A +DG +++WG G +G E D V MS E
Sbjct: 157 RIVQVACGASHSFALAEDGDVFSWGIGRSGALGHGLNVHEQTFDTV------MSPMEVLA 210
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +VV +ACG HT AL L CG Y +L
Sbjct: 211 LKGRRVVQIACGDSHTAALLQSGQLLTCGQRGYGRL 246
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE-------IRALSGL 83
V IACG H AL Q G + + G G+LG + T ++ + A G+
Sbjct: 216 VVQIACGDSHTAALLQSGQLLTCGQRGYGRLGRQIANTPDVLDDEYSSWFGPVVFAKEGV 275
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN-I 142
++ G H+ LYA+GWN+ GQ+GV D +V P +++ + D+ + +
Sbjct: 276 KCTYVACGAAHTLVVAGAHVLYAFGWNSSGQLGVGDCRDRLV--PTRVAYFDAVDTLSPL 333
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
+ VA G +H+L C D L+ G +E Q CG++
Sbjct: 334 AIASVAAGKQHSLVSCPDGKLFAWGNDEMGQ----CGLN 368
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 19 MPSRMDHF--LD----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
+P+R+ +F +D L + +A G H L +G +F+WGN GQ G S +
Sbjct: 317 VPTRVAYFDAVDTLSPLAIASVAAGKQHSLVSCPDGKLFAWGNDEMGQCGLNSCPQIYTL 376
Query: 73 EPREIRALSGLGVVQISAGGWHSAART 99
P +R+L GL V Q++AG HSA T
Sbjct: 377 -PHLVRSLIGLRVTQLAAGEAHSAVLT 402
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE- 227
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+D + + + +Q K+V + CG HT AL + ++ G Y QL
Sbjct: 228 ----NDRYFPNLLKSLRTQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + V + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE- 227
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+D + + + +Q K+V + CG HT AL + ++ G Y QL
Sbjct: 228 ----NDRYFPNLLKSLRTQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + V + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4059 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4116
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4117 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4174
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S +W G +Y +L +G ++ S
Sbjct: 4175 LEGY-----QIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSS 4221
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4168 LPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS--TAKSSPQKV 4225
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4226 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4273
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4274 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4318
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S + T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLSLTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4274 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4331
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4332 LQGKNIRQISAGRCHSAA 4349
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G L+LT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4060 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4117
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4118 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4175
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4176 LEGY-----QIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSS 4222
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4169 LPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4226
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4227 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4274
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4275 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4319
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4275 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4332
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4333 LQGKNVRQISAGRCHSAA 4350
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
GTD + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I+++ VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + I+++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIIQVACGYYHSLALS 153
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + V + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
GTD + P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 96/177 (54%), Gaps = 13/177 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4069 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4126
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4127 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4184
Query: 134 SEDFD-----SQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + + + + VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4185 LEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4241
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 524
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 525 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 567
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 568 SSHTIALSKDGRTVWSFGGGDNGKLGHG 595
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 20/155 (12%)
Query: 29 LVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
L +ACG +H LA++ +G +V+++G+G G+LG +S A P+++ L G+G+ +
Sbjct: 4198 LFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKVDVLCGIGIKK 4255
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ-----NI 142
++ G S A T+DG +Y +G D ++ P + + + Q +
Sbjct: 4256 VACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNRPQQIPVLAGV 4303
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ DVA G+ HTLAL ++ G N QL +G
Sbjct: 4304 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4338
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 561 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 618
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 619 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 670
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 671 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 711
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++D + + +ACG +ALT++G V+++G +G P + P++I
Sbjct: 4242 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPEGRARNHNRPQQIPV 4299
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
L+G+ + ++ G H+ A G +YAWG N+ GQ+G+
Sbjct: 4300 LAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4337
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 654 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 712
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 713 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4294 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4351
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4352 LQGKNVRQISAGRCHSAA 4369
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 601 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 657
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 658 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 714
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 715 ---GIAIQQISAGTSHSLA 730
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 510 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 565
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 566 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 618
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 619 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 668
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLLK-----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4052 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4109
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4110 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4167
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S +W G +Y +L +G ++ S
Sbjct: 4168 LEGY-----QIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSS 4214
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4161 LPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS--TAKSSPQKV 4218
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4219 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4266
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4267 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4311
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S + T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLSLTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4267 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4324
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4325 LQGKNIRQISAGRCHSAA 4342
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G L+LT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
GTD + P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
GTD + P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLLK-----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
Length = 467
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 95/164 (57%), Gaps = 15/164 (9%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+++ +F V +IACG H +T G + ++G G GQ G+ S T+ + P +
Sbjct: 277 NLPAQVSNFPGSYVKEIACGGRHSAVVTDAGTLLTFGWGLYGQCGHGS--TNDQLRPTSL 334
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGK-LDLVVHDPHPMSW 133
+LSG+ + +I+AG WH+ T DG +Y +G N GQ+G +G+ L ++ DP
Sbjct: 335 PSLSGIQIERIAAGLWHTMCITIDGRVYVFGGNQFGQLGTGASQGETLPRLLEDPC---- 390
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+S+ +K+ V+CG+RH+ L +D ++ GWN+Y QL +G
Sbjct: 391 ---LESKLVKM--VSCGARHSAILLEDGQVFSWGWNKYGQLGVG 429
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 76/185 (41%), Gaps = 35/185 (18%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY------------------PSSG----- 67
+T +A G H LAL+ G V+ WG G GQLG P++G
Sbjct: 210 ITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRVKMVSSPHLIPFTEQPTTGKHRSS 269
Query: 68 ---TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
+ P ++ G V +I+ GG HSA T G L +GW GQ G D +
Sbjct: 270 VVHNGSTNLPAQVSNFPGSYVKEIACGGRHSAVVTDAGTLLTFGWGLYGQCGHGSTNDQL 329
Query: 125 VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
P I++ +A G HT+ + D ++ G N++ QL G G SQ
Sbjct: 330 RPTSLP-------SLSGIQIERIAAGLWHTMCITIDGRVYVFGGNQFGQL--GTGASQGE 380
Query: 185 VMTRL 189
+ RL
Sbjct: 381 TLPRL 385
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + + + IA G H + +T +G V+ +G GQLG +S + E
Sbjct: 331 PTSLPSLSGIQIERIAAGLWHTMCITIDGRVYVFGGNQFGQLGTGASQGETLPRLLEDPC 390
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V +S G HSA +DG +++WGWN GQ+GV +D P+
Sbjct: 391 LESKLVKMVSCGARHSAILLEDGQVFSWGWNKYGQLGVGDSIDRNTPTQVPI-------- 442
Query: 140 QNIKVVDVACGSRHTLALCD 159
+ + VACG HTL L +
Sbjct: 443 EGCRPKMVACGWWHTLLLAE 462
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD--- 138
G+ + ++AGG H+ A + G ++ WG+ GQ+G+ ++ + V PH + ++E
Sbjct: 207 GVRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRVKM-VSSPHLIPFTEQPTTGK 265
Query: 139 ---------SQNIK----------VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
S N+ V ++ACG RH+ + D +L GW Y Q CG
Sbjct: 266 HRSSVVHNGSTNLPAQVSNFPGSYVKEIACGGRHSAVVTDAGTLLTFGWGLYGQ----CG 321
Query: 180 VSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSV 215
+ R + + I ++ A W++ +++
Sbjct: 322 HGSTNDQLRPTSLPSLSGIQIERIAAGLWHTMCITI 357
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V +I+ G H++ G +Y++G GQ+G
Sbjct: 289 FELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + V + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ +G +FSWG GS GQLG+ ++ D+ PR I+
Sbjct: 76 PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTT-EDSVAIPRLIKK 134
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N GQ+G+ + P S
Sbjct: 135 LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEF------PSQASPQRVKSL 188
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 189 EGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGL 225
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + ++ ++CG HC+AL +G F+WG GQLG +PS + P
Sbjct: 128 IPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS-----P 182
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +++L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 183 QRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDR--QSPCHVKL- 239
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G + QL
Sbjct: 240 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQL 275
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P D + ++ACG +H + L ++G V++ G ++GQLG+ G +P +I A
Sbjct: 26 PQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGA 81
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++ ++ G HS A + G L++WG + GQ+G D V P + + +
Sbjct: 82 LADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVA-IPRLI---KKLNQ 137
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q I + V+CG+ H +AL D + G N + QL +G
Sbjct: 138 QMI--LQVSCGNWHCMALAADGQFFTWGQNRHGQLGLG 173
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S TD P ++
Sbjct: 182 PQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGL-SDETD-RQSPCHVKL 239
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 240 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV----NPRRVLELMGS 295
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 296 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 323
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 245 VVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 302
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-------SEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P W S DS
Sbjct: 303 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSFKY 362
Query: 143 KVVD-VACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSVMT-RLSVPEHVKNC 198
+V + G T LC +NS + NQ ++ ++ R + EH +
Sbjct: 363 HIVKHIFSGGDQTFVLCSKYENSSPADDFRIMNQAQYTSLINDETIAIWRQKLSEHSNSN 422
Query: 199 PIVKLF-----AEHWNSARL--SVPEHAKDS 222
I + A WN + L + EH K S
Sbjct: 423 SINGVLQILSSAACWNGSFLEKKIDEHFKTS 453
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 12/118 (10%)
Query: 53 WGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN 111
WG S G G SS + EP+ +S + +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNT 63
Query: 112 GGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I + VACG H+LAL D L WG G
Sbjct: 64 KGQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDQGQLFSWGAG 112
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG G D +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GIDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ I++L G+ +QI+AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 ASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 K-----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 8/155 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P M V I CG +HCLALT +G +FSWG GQLG SS + + P++I
Sbjct: 138 PKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDT-PQQIVC 196
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G+ + QI++GG HS T ++ WG N+ GQ+G+ + D HP
Sbjct: 197 LRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYD----KSHPTLCK---SL 249
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N KV+ ++CG HT+AL + ++ G + QL
Sbjct: 250 RNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQL 284
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 19/166 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA-NMEPRE-I 77
P + +L + +I+CG H L +T++G ++S G+ G+LG+ + A +++ E +
Sbjct: 28 PKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAVSIDVVELV 87
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+LS + V+Q + G S T G +++WG N+ GQ+G GKL S E+
Sbjct: 88 SSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLG-RGKL----------SKEEER 136
Query: 138 DSQNIK------VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +K VV + CG+ H LAL DD L+ G N+Y QL +G
Sbjct: 137 KPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLG 182
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V A G + L +T G VFSWG +GQLG + +P+ +++L+ VVQI+
Sbjct: 95 VIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITC 154
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H A T DG L++WG N GQ+G+ HD + + + I + +A G
Sbjct: 155 GANHCLALTDDGRLFSWGCNKYGQLGLGSSHSF--HD----TPQQIVCLRGIPIAQIASG 208
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ L +++G G N + QL +
Sbjct: 209 GNHSFILTWSRAVFGWGKNSFGQLGL 234
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG DH +ALT+EG VFS+G G GQLG+ S T + P+ + L G + Q++
Sbjct: 254 VMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNS--TQNEILPKRVMELMGSVISQVAC 311
Query: 91 GGWHSAART-QDGFLYAW 107
G H+ A + G +YA+
Sbjct: 312 GRRHTVAFSPSSGKMYAF 329
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 17/135 (12%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
VF WG + GQL S + + P+E+ L L + +IS G H+ T+DG LY+ G
Sbjct: 4 VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-------QNIKVVDVACGSRHTLALCDDNS 162
N G++G P S + D +++V+ A GS +L +
Sbjct: 64 NEYGELG----------HSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGE 113
Query: 163 LWGCGWNEYNQLSMG 177
++ G N+ QL G
Sbjct: 114 VFSWGRNDKGQLGRG 128
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLLK-----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|405960252|gb|EKC26193.1| RCC1 domain-containing protein 1 [Crassostrea gigas]
Length = 422
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 49/212 (23%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
LKM+ + + ++ +D V++I+CG +H L LT G V+S G GSRGQLG +
Sbjct: 140 LKMIKVMPEISLPIEICVDFCVSEISCGKEHALILTNSGDVYSCGGGSRGQLGL--GHVE 197
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV------------ 117
+P + L+G+ + + AGGWHS A ++ G LY WGWN GQ+G+
Sbjct: 198 TREQPCLVEDLTGVRMKCVGAGGWHSMAISELGDLYVWGWNESGQLGLPCRNISTQSPPA 257
Query: 118 EGKLDLVVHDPHPM-----SWSEDFDSQN------------------------------I 142
E + + P P +W D +N +
Sbjct: 258 EERHRYQLASPEPADKATGTWFTRVDLENTVSGQCEAHIQRVGPVQVQSEPTVLDFGEDV 317
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+V VA G+RH+ + + L GWN+Y QL
Sbjct: 318 TLVKVAGGARHSAVVTGEGHLLTTGWNDYGQL 349
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4066 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4123
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4124 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4181
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S +W G +Y +L +G ++ S
Sbjct: 4182 LEGY-----QIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSS 4228
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4175 LPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS--TAKSSPQKV 4232
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4233 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4280
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4281 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4325
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4281 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4338
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4339 LQGKNVRQISAGRCHSAA 4356
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + V + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +QI+AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLLK-----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
GTD + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I+++ VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + I+++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIIQVACGYYHSLALS 153
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
GTD + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I+++ VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + I+++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIIQVACGYYHSLALS 153
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4067 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4124
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4183 LEGY-----QIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4176 LPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4233
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4234 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4281
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELAATRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4339
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4340 LQGKNVRQISAGRCHSAA 4357
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLLK-----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
GTD + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I+++ VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + I+++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIIQVACGYYHSLALS 153
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4071 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4128
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G V+Q+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4129 PRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4186
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4187 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4233
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
++DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 SEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4180 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4237
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4238 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4285
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 4286 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4330
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP I
Sbjct: 4286 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLITV 4343
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4344 LQGKNIRQISAGRCHSAA 4361
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + ++ G+ H+LA
Sbjct: 717 ---GVAIQQISAGTSHSLA 732
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A++++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
caballus]
Length = 988
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 13/159 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPR 75
P ++ + + ++CG H LAL++ G VFSWG S+GQLG +PS + P+
Sbjct: 90 PKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDS-----PQ 144
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G ++ V P S
Sbjct: 145 RVRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGN-NVPVQSYKPRSIGA 203
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L + ++ G N QL
Sbjct: 204 ---LRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQL 239
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L V+ ++CG +H LA+ G VF+WG GS GQLG N P++I+
Sbjct: 37 PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLG-TGEVKGINFTPKKIKT 95
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G+ ++Q+S G +HS A ++ G +++WG N+ GQ+G+ + P S
Sbjct: 96 LTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEF------PSQDSPQRVRSL 149
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ I + VA G H+ AL + +G G N QL++
Sbjct: 150 EGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALS 187
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 19/143 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA-NMEPREIR 78
P R+ + + +A G H AL+ G F WGN S GQL + + +PR I
Sbjct: 143 PQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIG 202
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL LGV+ IS G H+A TQ+G ++ +G N+ GQ+G H P ++D
Sbjct: 203 ALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLG---------HSPS----AQDRG 249
Query: 139 SQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 250 PQLVERIDGLVSQIDCGSYHTLA 272
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
+S + P IR L L V +S G HS A G ++AWG + GQ+G G++ +
Sbjct: 28 NSPLEETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGT-GEVKGI 86
Query: 125 VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P + IK++ V+CG H+LAL + ++ G N QL +G
Sbjct: 87 NFTPKKIK-----TLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLG 134
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P + +L V I+CG++H LTQ G VF++G+ S GQLG+ S D P+ +
Sbjct: 196 YKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRG--PQLV 253
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ GL V QI G +H+ A+ + G V HP + E+F
Sbjct: 254 ERIDGL-VSQIDCGSYHT---------LAYVYTTGQVVSFGRGPSCRSSSTHPEAQIENF 303
Query: 138 D 138
D
Sbjct: 304 D 304
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
GTD + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I+++ VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + I+++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIIQVACGYYHSLALS 153
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +QI+AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLLK-----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
GTD + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I+++ VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + I+++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIIQVACGYYHSLALS 153
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + V + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V +I+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + V + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
vitripennis]
Length = 533
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 103/194 (53%), Gaps = 13/194 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P+ + + VVT IACG H +ALT++G V+SWG + GQ+ SSG +N PR++
Sbjct: 120 PTLCLNLNEKVVTAIACGSHHSVALTEDGEVYSWGQNNCGQV---SSGISSNQGAPRKVN 176
Query: 79 -ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL+G VV I+ G S A T G ++ WG+N GQ+G+ ++ +S +
Sbjct: 177 SALTGKVVVSIACGQTSSMAVTDVGEVFGWGYNGVGQLGIGNYVN-------QLSPCKVT 229
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
I + VACG HTLAL D+ +L+ G N + QL +G + + + +L+V E +
Sbjct: 230 GLNGIVIEKVACGYAHTLALSDEGALYVWGGNGFGQLGLGNKANACTPI-KLNVTEMGRI 288
Query: 198 CPIVKLFAEHWNSA 211
I L H + A
Sbjct: 289 SDIATLHYNHISVA 302
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 8/145 (5%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
H LALT +G ++SWG+ +LG S T+ + P L+ V I+ G HS A T
Sbjct: 88 HVLALTNKGEIYSWGHNGYCELGNGS--TNQGLTPTLCLNLNEKVVTAIACGSHHSVALT 145
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
+DG +Y+WG NN GQV + + P + + VV +ACG ++A+ D
Sbjct: 146 EDGEVYSWGQNNCGQVSS----GISSNQGAPRKVNSALTGK--VVVSIACGQTSSMAVTD 199
Query: 160 DNSLWGCGWNEYNQLSMGCGVSQVS 184
++G G+N QL +G V+Q+S
Sbjct: 200 VGEVFGWGYNGVGQLGIGNYVNQLS 224
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG---TDANMEPRE 76
P ++ +V+ +ACG+ H LAL+ EG ++ WG GQLG + T + E
Sbjct: 225 PCKVTGLNGIVIEKVACGYAHTLALSDEGALYVWGGNGFGQLGLGNKANACTPIKLNVTE 284
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
+ +S + + + S A Q G +Y WG G V
Sbjct: 285 MGRISDIATLHYN---HISVAMGQGGKIYMWGQCRGQSV 320
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
Length = 4798
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4004 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4061
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4062 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4119
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4120 LEGY-----QIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSS 4166
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4113 LPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4170
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4171 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4218
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4219 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4263
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELAATRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4219 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4276
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4277 LQGKNVRQISAGRCHSAA 4294
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P
Sbjct: 20 EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKP 75
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
++ AL +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S
Sbjct: 76 EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 136 D------IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME- 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG G D +
Sbjct: 123 ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GIDCKKQA 179
Query: 74 -PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V +
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN----- 234
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q K+V + CG HT AL + ++ G Y QL
Sbjct: 235 LLKSLRTQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 8/161 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + IACG+ H LAL++ VFSWG GQLG +
Sbjct: 122 EEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL-GFELKSQSA 180
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLL-- 236
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 -KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG + GQ+G+ G + + + S ++
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V +ACG H+LAL + ++ G N++ QL +G
Sbjct: 137 --IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 232 VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVF 289
Query: 79 ALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 TDGQLGLP-GTEEY-----IKVPRNIKSLTDIQIVQIACGYYHSLALS 153
>gi|426248720|ref|XP_004018107.1| PREDICTED: RCC1 domain-containing protein 1 [Ovis aries]
Length = 307
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 80/178 (44%), Gaps = 35/178 (19%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVVQ 87
L + G +H L L G VFSWG G GQLG+ GT + EPR + AL GL + +
Sbjct: 89 LRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGH---GTLEPEPEPRLLEALQGLRMAE 145
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQV------------------------GVEGKLDL 123
++AGGWHS ++ G +Y WGWN GQ+ G E K
Sbjct: 146 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAGEASGLDEDGSEVKRVS 205
Query: 124 VVHD--PHPMSWSEDFD-----SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D P P + F S + V V+CGSRHT L L+ GW +Y QL
Sbjct: 206 AGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQL 263
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 68/171 (39%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP--------------- 64
P ++ L + ++A G H + L++ G ++ WG GQL P
Sbjct: 132 PRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAGEA 191
Query: 65 -------------SSGTDANMEP----REIRAL----SGLGVVQISAGGWHSAARTQDGF 103
S+G D P + AL G V++S G H+A T+ G
Sbjct: 192 SGLDEDGSEVKRVSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGE 251
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G + D D P E F + ++V V+CG +T
Sbjct: 252 LYTWGWGKYGQLGHK---DTTTLD-RPCR-VEYFVDKQLQVRTVSCGPWNT 297
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 11/138 (7%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
+H LALT++G V+SWG GS G LG T++ P + ALSG +V ISAG HSAA
Sbjct: 518 NHILALTKDGKVYSWGQGSNGVLGI--GNTESQTAPTAVAALSGDRIVHISAGSMHSAAV 575
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RHTLA 156
T+DG LY WG + G++G D ++ + E + +K+V V CGS HTLA
Sbjct: 576 TEDGVLYTWGKGSYGRLGHGNAEDKLIP-----TIVEGLN--GVKIVQVDCGSGDAHTLA 628
Query: 157 LCDDNSLWGCGWNEYNQL 174
L D +W G +Y +L
Sbjct: 629 LDDTGQVWSWGDGDYGKL 646
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 25/189 (13%)
Query: 17 FHMPSRMDHFLDLVVTDIA--CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
MP ++ VV +A C H LA+T +G VFSWG+G GQLG+ S + P
Sbjct: 2998 IRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGHGS--LQSYDRP 3055
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPH 129
+ I + ++S G HSAA + +G L+ WG G++G + K LV
Sbjct: 3056 KMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRA--- 3112
Query: 130 PMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
+ +++ VACGSR HTLA DNSLW G + +L + G S V
Sbjct: 3113 ---------LEKVRISCVACGSRNAHTLA-AGDNSLWAWGDGSFGKLGLKDGSSSTDVPV 3162
Query: 188 R-LSVPEHV 195
+ ++ P ++
Sbjct: 3163 QVITFPSNI 3171
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS--AG 91
I G A+T +G V++ G + G+LG SS A P A G+ V +I+ +G
Sbjct: 3872 ITGGEQTLFAVTDDGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSG 3931
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
G H A T G LYAWG G++G+ +++ V PH + E S++ V+D CGS
Sbjct: 3932 GKHCLAVTTQGELYAWGEGEDGKLGLGTTVNMNV--PHLI---ESLKSKH--VIDAGCGS 3984
Query: 152 RHTLALCDDNSLWGCGWNEYNQL 174
H+ + DD SL+ G Y +L
Sbjct: 3985 SHSACITDDGSLYTWGKGRYGRL 4007
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 75/147 (51%), Gaps = 16/147 (10%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG-- 84
+ +V D G H LAL G V+SWG+G G+LG P G+D N P+ I SG+G
Sbjct: 612 VKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRP--GSDQNKVPKPI---SGIGST 666
Query: 85 --VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
VV+I G S A T+DG LY+WG + Q+G G + V SE
Sbjct: 667 SPVVKIICGNQISMALTKDGKLYSWGCGDTYQLG-HGNQEHVRQPKLIEGLSETV----- 720
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWN 169
V DV+ G++H +AL D+ ++ G N
Sbjct: 721 -VSDVSVGAQHCVALTTDSDVYAWGKN 746
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 68/151 (45%), Gaps = 21/151 (13%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGG 92
I G HCLA+T +G +++WG G G+LG GT NM P I +L V+ G
Sbjct: 3928 IHSGGKHCLAVTTQGELYAWGEGEDGKLGL---GTTVNMNVPHLIESLKSKHVIDAGCGS 3984
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS--QNIKVVDVACG 150
HSA T DG LY WG G++G H+ H S + +V VACG
Sbjct: 3985 SHSACITDDGSLYTWGKGRYGRLG---------HNDHETQHKPKLVSALKGEQVTCVACG 4035
Query: 151 SRHTLALCDDNSLWGC----GWNEYNQLSMG 177
S LC S GC G +Y +L G
Sbjct: 4036 SGDAQTLCATAS--GCVFSWGDGDYGKLGRG 4064
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
+ I+ G H A+T++G++++WG GS G+LG+ + + P + L+G+ +VQ+
Sbjct: 562 IVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGH--GNAEDKLIPTIVEGLNGVKIVQVDC 619
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G H+ A G +++WG + G++G G V P P+S VV +
Sbjct: 620 GSGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKV--PKPISGI----GSTSPVVKII 673
Query: 149 CGSRHTLALCDDNSL--WGCG 167
CG++ ++AL D L WGCG
Sbjct: 674 CGNQISMALTKDGKLYSWGCG 694
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P ++D V + CG +ALT G V++WG G +LG+ G D++ PR +
Sbjct: 4071 VPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGH---GDDSHQRTPRRV 4127
Query: 78 RAL-SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L + V+ I G H T+ G +++WG N+ GQ+G + + V P ++ ++
Sbjct: 4128 LGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVSV--PKRINITD- 4184
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN-----EYNQLSMGCGVSQVSVMTRLSV 191
NI + VACGS H++A C E+N L S + RL +
Sbjct: 4185 ----NICIDHVACGSAHSIAWSSKQRNLSCPLPAKVPMEFNHLQH---FSLPVLRNRLIL 4237
Query: 192 PEHVKN--CPIVKLFAEHWNS 210
+H N C + LF H ++
Sbjct: 4238 LQHFSNIFCKSMALFTLHQST 4258
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 17/144 (11%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
QV PS + I CG + LT+EG V++WG G +LG S T P
Sbjct: 3163 QVITFPSN--------IIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDS--TSVQPIP 3212
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ L+ + Q++ G H A T G +Y+WG N GQ G + P ++
Sbjct: 3213 TLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQG--NNSTICNRKPQIVA-- 3268
Query: 135 EDFDSQNIKVVDVACGSRHTLALC 158
+ ++ +ACGS H++A
Sbjct: 3269 ---SLKGHRICKIACGSSHSIAFA 3289
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I CG +ALT++G ++SWG G QLG+ + +P+ I LS V +S
Sbjct: 669 VVKIICGNQISMALTKDGKLYSWGCGDTYQLGH--GNQEHVRQPKLIEGLSETVVSDVSV 726
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G H A T D +YAWG N+ +V G +
Sbjct: 727 GAQHCVALTTDSDVYAWGKNSSFEVNESGDI 757
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q + P ++ F + +++CG H A++ G +F+WG G+ G+LG+ S + +P
Sbjct: 3050 QSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDS--NNQTKP 3107
Query: 75 REIRALSGLGVVQISAGGWHS-AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+ +RAL + + ++ G ++ D L+AWG + G++G++ S
Sbjct: 3108 KLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDG-----------SS 3156
Query: 134 SEDFDSQNI----KVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
S D Q I ++ + CG ++ L + ++ G EY +L
Sbjct: 3157 STDVPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRL 3201
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ V +P+ +D +T +A G HCLALT G V+SWG+ GQ G ++ T N +
Sbjct: 3206 TSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQG--NNSTICNRK 3263
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYA 106
P+ + +L G + +I+ G HS A Q A
Sbjct: 3264 PQIVASLKGHRICKIACGSSHSIAFAQGSLTTA 3296
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
++P ++ V D CG H +T +G +++WG G G+LG+ + + +P+
Sbjct: 3963 MNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGH--NDHETQHKPKL 4020
Query: 77 IRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ AL G V ++ +G + T G +++WG + G++G G V
Sbjct: 4021 VSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSKV--------P 4072
Query: 135 EDFDSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ DS K V+ + CGS+ ++AL ++ G +Y +L G
Sbjct: 4073 KKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHG 4116
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANM--EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
VF WG+ RGQLG G + N PR +LS L I+ G A T DG +YA
Sbjct: 3836 VFGWGHNHRGQLG----GIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYAS 3891
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC--GSRHTLALCDDNSLWG 165
G+ G++G+ G D V P P++ ++ I V +A G +H LA+ L+
Sbjct: 3892 GYAAHGRLGI-GSSDNVA-TPTPLT---SLATRGIAVKKIAIHSGGKHCLAVTTQGELYA 3946
Query: 166 CGWNEYNQLSMGCGVS 181
G E +L +G V+
Sbjct: 3947 WGEGEDGKLGLGTTVN 3962
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 15/139 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGV--VQISA 90
A G ++ +G VF+ G GS G+LG G AN+ P +I +LS V V +S
Sbjct: 2963 FAGGSKCSFVVSDDGKVFACGEGSSGRLGI---GGFANIRMPHQISSLSMYVVRKVAVSC 3019
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H A T DG +++WG GQ G G L +D M E F +++I+ +V+CG
Sbjct: 3020 AGRHVLAVTADGKVFSWG---DGQYGQLGHGSLQSYDRPKM--IEIFQAKHIR--EVSCG 3072
Query: 151 SRHTLALCDDNSL--WGCG 167
+ H+ A+ + L WG G
Sbjct: 3073 TGHSAAVSVNGELFTWGQG 3091
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + VV+D++ G HC+ALT + V++WG S ++ SG D P I A
Sbjct: 710 PKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKNSSFEVN--ESG-DIISSPLMIEA 766
Query: 80 LSGLGVVQISAGG 92
SG G + I+ G
Sbjct: 767 ASGKGALLIACGA 779
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 30/159 (18%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVF-----SWGNGSRGQLGYPSSGTDANMEPREIRAL 80
L++ + H + LT G VF S G+ + QL +P
Sbjct: 460 LLEIGAKEFYSSPKHRVVLTVHGTVFYVMDASMGDFTVEQLFFPGDEE------------ 507
Query: 81 SGLGVVQI--SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
++QI + G H A T+DG +Y+WG + G +G+ G + + S D
Sbjct: 508 ----IIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGI-GNTESQTAPTAVAALSGD-- 560
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++V ++ GS H+ A+ +D L+ G Y +L G
Sbjct: 561 ----RIVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHG 595
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V V+CG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLG 172
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + ++CG+ H LAL++ VFSWG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 7/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++CG H LAL +G V++WG S GQLG S + PR I++LS + +VQ+S
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS-EECIRVPRNIKSLSDIQIVQVSC 144
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HS A ++ +++WG N GQ+G+ +D + S I + VA G
Sbjct: 145 GYYHSLALSKASEVFSWGQNKYGQLGL--GIDCKKQTSPQLIKS----LLGIPFMQVAAG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ L +++G G N++ QL +
Sbjct: 199 GAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVSCGYYHSLALS 153
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG + GQ+G+ G + + + S ++
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
I++V +ACG H+LAL + ++ G N++ QL +G + R S P+ +K+
Sbjct: 137 --IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE------LKRQSSPQLIKS 186
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + IACG+ H LAL++ VFSWG GQLG
Sbjct: 122 EEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL-GFELKRQSS 180
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ I++L G+ Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 181 PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLL-- 236
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 -KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 232 VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVF 289
Query: 79 ALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 TDGQLGLP-GTEEY-----IRVPRNIKSLTDIQIVQIACGYYHSLALS 153
>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
Length = 1609
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
H +ALT+ G VFSWG+G G+LG+ +S D PR+I AL G VVQ++ G HSA T
Sbjct: 846 HAIALTENGEVFSWGDGDYGKLGHGNS--DRQRRPRQIEALRGQEVVQVACGFKHSAVVT 903
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
DG L+ +G+ + G++G + + P + E++ + VACG HT+ +
Sbjct: 904 IDGKLFTFGYGDYGRLGHGSTTNKKI--PERVMALENY-----IIGQVACGLNHTVIVSQ 956
Query: 160 DN-SLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
DN ++W CG +Y +L +G G S + T++ V V
Sbjct: 957 DNLTVWACGDGDYGKLGIG-GTSAKTSPTKIEVLSRV 992
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 22/166 (13%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + ++ +ACG +H + ++Q+ + V++ G+G G+LG GT A P +I
Sbjct: 929 IPERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGI--GGTSAKTSPTKI 986
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS +G+ +IS G +AA T DG L+ + GQ + G + S F
Sbjct: 987 EVLSRVGIKKISCGAQFTAALTWDGKLFMF-----GQDRMCGNCE--------TRTSPSF 1033
Query: 138 DSQNIK------VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ Q + ++D++ G+ HT+AL ++ G N QL +G
Sbjct: 1034 NPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLG 1079
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P++++ + + I+CG ALT +G +F +G G + T + P+ + A
Sbjct: 983 PTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDR--MCGNCETRTSPSFNPQVVTA 1040
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LS ++ IS G H+ A T G +Y WG N GQ+G L H P + E
Sbjct: 1041 LSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLG----LGHTNHVQEP-TLVESLSG 1095
Query: 140 QNIKVVDVACGSRHTLA 156
+NI+ ++ G H+ A
Sbjct: 1096 KNIR--QISAGRTHSAA 1110
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4072 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4129
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG ++ +G + G++G+ + + P ++
Sbjct: 4130 PRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKL--PERVTA 4187
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4188 LEGY-----QIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSS 4234
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4181 LPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4238
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4239 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4286
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLA+ ++ G N QL +G
Sbjct: 4287 PQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLG 4331
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLVE-----ELAATRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LA+T G V++WG+ S GQLG T+ EP I
Sbjct: 4287 PQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGL--GHTNHVREPTLITV 4344
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4345 LQGKNIRQISAGRCHSAA 4362
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLVEELAATRIVDI 670
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ +
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLV 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + ++ G+ H+LA
Sbjct: 717 ---GVAIQQISAGTSHSLA 732
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ + D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V +I+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ + + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + V + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 94/172 (54%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4048 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4105
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4106 PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4163
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + + VACG HTLA+ D SL W G +Y +L +G ++ S
Sbjct: 4164 LE-----GLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAKSS 4210
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR-ALSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGTLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4157 LPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNS--TAKSSPQKV 4214
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN-----GGQVGVEGKLDLVVHDPHPMS 132
L G+G+ +++ G S A T+DG +Y +G + G+ + LV P+
Sbjct: 4215 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQLV-----PVL 4269
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I + D+A G+ HTLAL ++ G N QL +G
Sbjct: 4270 L-------GIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLG 4307
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ + AL G+ ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVVEALQGMFTRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + + DIA G +H LAL+ G V++WG+ S GQLG T+ EP + A
Sbjct: 4263 PQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGL--GHTNHVREPTLVTA 4320
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4321 LQGKNIRQISAGRCHSAA 4338
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + ++ G+ H+LA
Sbjct: 717 ---GVAIQQISAGTSHSLA 732
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 91/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVVEA-----LQGMFTRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG + GQ+G+ G + + + S ++
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
I++V +ACG H+LAL + ++ G N++ QL +G + R S P+ +K+
Sbjct: 137 --IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE------LKRQSSPQLIKS 186
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + IACG+ H LAL++ VFSWG GQLG
Sbjct: 122 EEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL-GFELKRQSS 180
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ I++L G+ Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 181 PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLL-- 236
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 -KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 232 VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVF 289
Query: 79 ALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 TDGQLGLP-GTEEY-----IRVPRNIKSLTDIQIVQIACGYYHSLALS 153
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 89/164 (54%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
MP+ ++ + V +A G HCLAL+ EG V+SWG G G+LG+ G + + P+
Sbjct: 3971 MPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH---GNRLSYDRPK 4027
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I L G +V ++ GG HSAA T G+LY WG G++G D + P + +
Sbjct: 4028 LIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLT--PKLVEALQ 4085
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
D+ KV+DVACGS TL + DD+++W G +Y +L G
Sbjct: 4086 DY-----KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4124
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P +++ L V + CG +ALT+ G +++WG G +LG+ GTD ++ PR++
Sbjct: 4131 VPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGH---GTDDHVRRPRKV 4187
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G ++ I+ G H A + G ++ WG N+ GQ+G + P +
Sbjct: 4188 AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG--DGTTCALQRPRLV-----H 4240
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4241 ALQGKKITRVACGSAHTLA 4259
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 13/165 (7%)
Query: 30 VVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
++ +ACG L +T GIVFSWG+G G+LG G + + P+ + L + V +
Sbjct: 611 MIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLG--RGGCNGSKTPKIVDKLLDINVAK 668
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+ GG SAA T G +Y WG ++G G + H +P + E ++ +K ++
Sbjct: 669 VYCGGQFSAALTAYGEVYTWGKGEAYRLG-HGNEE---HVRYPKAI-EALKTKKVK--EL 721
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQL--SMGCGVSQVSVMTRLS 190
GS H LAL +D ++G G N+Y Q+ ++G VS+ ++ LS
Sbjct: 722 CVGSLHVLALTEDQLVYGWGRNDYGQIDPALGTIVSEPTLCPTLS 766
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 21/165 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D+ACG H A+T G +++WG G G+LG+ T+ ++P+ +++
Sbjct: 3039 PRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRLGH--GDTNTQLKPKLVQS 3096
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGK----LDLVVHDPHPMSW 133
L G V+Q++ G + A T DG +Y+WG + G++G G L+V
Sbjct: 3097 LVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLV-------- 3148
Query: 134 SEDFDSQN-IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D N + VV + CG++ +LAL +W G +Y +L G
Sbjct: 3149 ----DRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3189
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPR 75
+P + L IA G ++QEG +++ G G+ G+LG G D N EP+
Sbjct: 2930 IKLPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGL---GDDGNACEPK 2986
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
I LS + V + +GG H+ A TQDG +++WG G++G L P +
Sbjct: 2987 PIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSL--DKPRLI-- 3042
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
E S+ I+ DVACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3043 -ESLKSKRIR--DVACGSGHSAAITSSGELYTWGLGEYGRLGHGDTNTQLK 3090
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + + V +ACG +ALT +G V+SWG+G G+LG G+D P +
Sbjct: 3091 PKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLG--RGGSDGCYTPLLV 3148
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+GLGVVQI G S A T+ G ++ WG + ++G G +D H +
Sbjct: 3149 DRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG-HG------NDHHVRKPTLVE 3201
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ KV+ VA G+ H LA+ D ++ G N++ Q G +
Sbjct: 3202 GLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTI 3244
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P +D LD+ V + CG ALT G V++WG G +LG+ G + ++ P+ I
Sbjct: 655 PKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGH---GNEEHVRYPKAIE 711
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL V ++ G H A T+D +Y WG N+ GQ ++ L +V +P +
Sbjct: 712 ALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQ--IDPALGTIVSEP---TLCPTLS 766
Query: 139 SQNIKVVDVACGSRHTLALC 158
+N V+ + CG + A C
Sbjct: 767 GKN--VIGLVCGPTQSFAWC 784
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
+ P +D L V I CG LALT+ G V++WG G +LG+ G D ++ +P
Sbjct: 3143 YTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH---GNDHHVRKPTL 3199
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G V+ ++ G H A T G +YAWG N+ GQ +G +V+ + D
Sbjct: 3200 VEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQ---QGNGSTIVNKKPSLVHELD 3256
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ +V V+CGS H++A
Sbjct: 3257 ----DARVNRVSCGSSHSIA 3272
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ L + D+ACG H A+T G +++WG G G+LG+ S + + P+
Sbjct: 4023 YDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDS--EDQLTPKL 4080
Query: 77 IRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ AL V+ ++ +G + T D +++WG + G++G G V PM
Sbjct: 4081 VEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV----PMKIE 4136
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V+ V CGS+ ++AL S++ G +Y++L G
Sbjct: 4137 ---SLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHG 4176
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 18 HMPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+ F D V IA D H LALT++ V+SWGNG G+LG+ EP+
Sbjct: 493 QYPQRVYGFSDKFVAMIASHPDGKHYLALTEDSSVYSWGNGDGGRLGH--GDRTWYEEPK 550
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I +L + I+ G +SAA + +G LY WG N G++G D++V P +S
Sbjct: 551 LIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMV--PTLVSALN 608
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNS----LWGCGWNEYNQLSMG 177
+V VACGS + LC S WG G +Y +L G
Sbjct: 609 GH-----MIVYVACGSGDSQTLCVTASGIVFSWGDG--DYGKLGRG 647
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + L + G A+T +G V++ G G+ G+LG GTD+ M P +
Sbjct: 3919 LPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGI--GGTDSVMMPTLLE 3976
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + V V +++GG H A + +G +Y+WG + G++G +L +D P E
Sbjct: 3977 SIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLS---YD-RPKLIEEL 4032
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
++ +VDVACG H+ A+ L+ G Y +L G Q++
Sbjct: 4033 LGTE---IVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLT 4077
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P +LS L VQ++ G A T DG +YA
Sbjct: 3896 GAIYGWGHNHRGQLG-GLEGAKVKL-PVLCESLSALRPVQLTGGEQTLFAVTADGKVYAT 3953
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ G++G+ G +++ + E +K V V G +H LAL + ++ G
Sbjct: 3954 GYGAVGRLGIGGTDSVMMP-----TLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWG 4008
Query: 168 WNEYNQLSMGCGVS 181
+ +L G +S
Sbjct: 4009 EGDDGKLGHGNRLS 4022
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ + D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V +I+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ + + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + V + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + +ACG H LAL+ +G +FSWGN S GQLG S T +P+E+ +
Sbjct: 130 PRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGS--TKNQPKPQELTS 187
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G+ QI AGG HS ++ G ++ +G N GQ+G+ G + H S
Sbjct: 188 LTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGL-GDTGDRKYPTHVKSL------ 240
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+++KV ++CG HT L D + G Y QL
Sbjct: 241 RSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQL 275
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPREIRALSGLGVVQIS 89
+ ++CG H L + + VFSWG GQLG+ +G + + PR ++ LS L +VQ++
Sbjct: 86 IQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVA 145
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GG HS A + DG +++WG N+ GQ+G+ + P P + I +
Sbjct: 146 CGGKHSLALSNDGRIFSWGNNSHGQLGIGS----TKNQPKPQELT---SLTGIPFCQIVA 198
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G H+ L +++G G N + QL +G
Sbjct: 199 GGSHSFVLSKSGAVFGFGRNTFGQLGLG 226
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 8/152 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +++CG H + + EG V++ G+ GQLG + P I AL + Q+S
Sbjct: 36 MREVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQ----DKGHKRPTVITALDTQSIQQVSC 91
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +H+ +++WG+++ GQ+G L+ ++ ++ S +++V VACG
Sbjct: 92 GDYHNLVVNDKYQVFSWGYDDCGQLG--HTLEAGGNNSRRPRMVKELSS--LQIVQVACG 147
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
+H+LAL +D ++ G N + QL +G +Q
Sbjct: 148 GKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQ 179
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + L VT I+CG +H LT +G V ++G GS GQLG+ S+ +A PR++
Sbjct: 234 PTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEA--LPRKVFE 291
Query: 80 LSGLGVVQISAGGWHSAARTQ-DGFLYAWGWNNGGQVGVEGKLD----LVVHDPH-PMSW 133
L GL V Q++ G H+ A + G +Y++G GQ+G +G + + V P P +
Sbjct: 292 LMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGPFVPFAG 351
Query: 134 SEDFDSQNIKVVDVACGSRHTLAL 157
+ Q V + G AL
Sbjct: 352 DNSLEEQCYVVQAITAGGDQAFAL 375
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
++ WG G++G+ G + V+ P + + +V+CG +HT+ + + ++
Sbjct: 1 MFCWGAARNGELGLGGIEEDVILAPKEQPFGA-----TKAMREVSCGRQHTVFVLAEGTV 55
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ CG N+Y QL G + +V+T L
Sbjct: 56 YTCGSNDYGQLGQDKGHKRPTVITAL 81
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 8/161 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + IACG+ H LAL++ VFSWG GQLG +
Sbjct: 122 EEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL-GFELKSQSA 180
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLL-- 236
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 -KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG + GQ+G+ G + + + S ++
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V +ACG H+LAL + ++ G N++ QL +G
Sbjct: 137 --IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 232 VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVF 289
Query: 79 ALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 TDGQLGLP-GTEEY-----IKVPRNIKSLTDIQIVQIACGYYHSLALS 153
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +QI+AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLLK-----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG + GQ+G+ G + + + S ++
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
I++V +ACG H+LAL + ++ G N++ QL +G + R S P+ +K+
Sbjct: 137 --IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE------LKRQSSPQLIKS 186
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + IACG+ H LAL++ VFSWG GQLG
Sbjct: 122 EEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL-GFELKRQSS 180
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ I++L G+ Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 181 PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLL-- 236
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 -KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 232 VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVF 289
Query: 79 ALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 TDGQLGLP-GTEEY-----IRVPRNIKSLTDIQIVQIACGYYHSLALS 153
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ + D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V +I+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ + + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + V + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +QI+AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLLK-----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|119622536|gb|EAX02131.1| RCC1 domain containing 1, isoform CRA_b [Homo sapiens]
Length = 390
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 171 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLVMA 227
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-----DLVVHD-------------- 127
+++AGGWHS ++ G +Y WGWN GQ+ + + + V +
Sbjct: 228 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRT 287
Query: 128 -------PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P P + F + V +CGSRHT + L+ GW +Y QL
Sbjct: 288 GGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQL 346
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 65/171 (38%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ LV+ ++A G H + +++ G ++ WG GQL P+ D RE
Sbjct: 215 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 274
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G V+ S G H+A T+ G
Sbjct: 275 TELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGE 334
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E L P + E F + ++V V CG +T
Sbjct: 335 LYTWGWGKYGQLGHEDTTSL--DRPRRV---EYFVDKQLQVKAVTCGPWNT 380
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +QI+AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLLK-----SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
Length = 4860
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4066 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4123
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4124 PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4181
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HT+A+ D S+ W G +Y +L +G ++ S
Sbjct: 4182 LEGY-----QIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSS 4228
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H +A++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4175 LPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4232
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4233 DILCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4280
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + D+A G+ HTLAL ++ G N QL +G
Sbjct: 4281 PQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG 4325
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELAATRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + + DIA G +H LAL+ G V++WG+ S GQLG T+ EP I
Sbjct: 4281 PQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGL--GHTNHVREPTLITV 4338
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4339 LQGKNIRQISAGRCHSAA 4356
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + ++ G+ H+LA
Sbjct: 717 ---GVSIQQISAGTSHSLA 732
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 85/159 (53%), Gaps = 12/159 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PR 75
+P + D+ + +ACG+ H LAL++ VFSWG GQLG G D + P+
Sbjct: 126 RVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGL---GYDLKKQTSPQ 182
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I++L G+ QI+AGG HS A T G ++ WG N GQ+G+ + D V P+ + +
Sbjct: 183 LIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLL---K 237
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
SQ K+V ++CG HT AL + ++ G Y QL
Sbjct: 238 SLRSQ--KIVYISCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+V P R + FL+ V D+ CG H + + +G V++ G GQLG+ S
Sbjct: 19 EEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKR 74
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++ AL +V +S G H+ G +YAWG+ GQ+G+ G + + S
Sbjct: 75 PEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSL 134
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
S+ +++V VACG H+LAL + ++ G N++ QL +G + +
Sbjct: 135 SD------VQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKK 177
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I+CG DH ALT+EG VF++G G GQLG+ S+G + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G+
Sbjct: 289 FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGM 329
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E P + D+QNI V V+CG HTL L D ++ G+
Sbjct: 64 GQLGHEKSR----KRPEQVGA---LDAQNI--VAVSCGEAHTLTLNDKGQVYAWGFAADG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL G+ TR VP ++K + IV++ +++S LS
Sbjct: 115 QL----GLPGTEEYTR--VPRNIKSLSDVQIVQVACGYYHSLALS 153
>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Sus scrofa]
Length = 2561
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 1678 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 1735
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 1736 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 1793
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 1794 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 1840
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 1787 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 1844
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 1845 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 1892
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 1893 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 1937
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 1893 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 1950
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 1951 LQGKNVRQISAGRCHSAA 1968
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 84/152 (55%), Gaps = 7/152 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ACG H LAL++ G VFSWG+ + GQLG+ GT + P+ I++L+ VVQI+A
Sbjct: 86 IINVACGEMHSLALSRWGEVFSWGSDNYGQLGHQLGGT-LQIVPKLIKSLAKYQVVQIAA 144
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A T G ++ WG N+ GQ+G L P+ + + I +ACG
Sbjct: 145 GQRHSVALTNAGEIFVWGANDFGQLG------LGTITPYESTPTTVCSLSGIPFALIACG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
+ HT A+ +++G G N QL + VS+
Sbjct: 199 ANHTFAVSKSGAVFGWGKNINGQLGLNDTVSK 230
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +D F V A G +H L LT++G V+S G+ GQLG+ P+ +
Sbjct: 25 PKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDYGQLGH----DQPRKRPQLVSG 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKLDLVVHDPHPMSWSEDF 137
L ++ ++ G HS A ++ G +++WG +N GQ+G + G L +V ++
Sbjct: 81 LDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLGHQLGGTLQIVPKLIKSLA----- 135
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+VV +A G RH++AL + ++ G N++ QL +G
Sbjct: 136 ---KYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLG 172
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+++ + V I+CG + LT +G VFS G G GQLG+ GT + PR++
Sbjct: 232 FPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGH--GGTSNEILPRQVL 289
Query: 79 ALSGLGVVQISAGGWHSAA 97
L G + QIS G HS A
Sbjct: 290 ELMGSTITQISCGRQHSLA 308
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+F WG+ G+LG + P+ + V++ + G H+ T+DG +Y+ G
Sbjct: 1 MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ GQ+G D P +S + + +++VACG H+LAL ++ G +
Sbjct: 61 NDYGQLG----HDQPRKRPQLVSGLDAYS-----IINVACGEMHSLALSRWGEVFSWGSD 111
Query: 170 EYNQLSMGCG 179
Y QL G
Sbjct: 112 NYGQLGHQLG 121
>gi|412985305|emb|CCO20330.1| predicted protein [Bathycoccus prasinos]
Length = 534
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++++ D +IA G H LAL ++G V+SWG+G GQLG+ +G +A PR I
Sbjct: 305 YHPKKVENLRDCC--EIAAGSFHVLALAKDGTVYSWGHGEYGQLGHQKTGNEAT--PRAI 360
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-------VHDPHP 130
L+ GVV+I AGGWHSA T G L WG ++G+ G D V P P
Sbjct: 361 ETLNRKGVVKIRAGGWHSACITAGGQLLTWGRGEYARLGM-GDDDCADKITPTEVKFPSP 419
Query: 131 M-----SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
E Q K+VD + G HT+AL L G N +L
Sbjct: 420 TDADDDDDDESKRHQRYKIVDASLGGSHTIALTSQGQLLSWGRNSLGRL 468
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 64/161 (39%), Gaps = 27/161 (16%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P ++ V I G H +T G + +WG G +LG + P E++
Sbjct: 356 TPRAIETLNRKGVVKIRAGGWHSACITAGGQLLTWGRGEYARLGMGDDDCADKITPTEVK 415
Query: 79 ALS----------------GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD 122
S +V S GG H+ A T G L +WG N+ G++G
Sbjct: 416 FPSPTDADDDDDDESKRHQRYKIVDASLGGSHTIALTSQGQLLSWGRNSLGRLG------ 469
Query: 123 LVVHDPH-----PMSWSEDFDSQNIKVVDVACGSRHTLALC 158
VV+ PH + + + + V ++CG RH +ALC
Sbjct: 470 RVVNGPHSGIPGEVKFPPLPNERKWICVKLSCGGRHNMALC 510
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 20/126 (15%)
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VV 145
+++ GG S A T DG +Y+WG GG VG + HP +N++
Sbjct: 273 RVACGGMSSFAVTVDGDVYSWGCPVGG-VG--------PNTYHPKK------VENLRDCC 317
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
++A GS H LAL D +++ G EY QL G + E + +VK+ A
Sbjct: 318 EIAAGSFHVLALAKDGTVYSWGHGEYGQL----GHQKTGNEATPRAIETLNRKGVVKIRA 373
Query: 206 EHWNSA 211
W+SA
Sbjct: 374 GGWHSA 379
>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
Length = 1016
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 222 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 279
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 280 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 337
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 338 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 384
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 331 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 388
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 389 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 436
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL ++ G N QL +G
Sbjct: 437 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 481
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 437 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 494
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 495 LQGKNIRQISAGRCHSAA 512
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 85/159 (53%), Gaps = 12/159 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PR 75
+P + D+ + +ACG+ H LAL++ VFSWG GQLG G D + P+
Sbjct: 126 RVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGL---GYDLKKQTSPQ 182
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I++L G+ QI+AGG HS A T G ++ WG N GQ+G+ + D V P+ + +
Sbjct: 183 LIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLL---K 237
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
SQ K+V ++CG HT AL + ++ G Y QL
Sbjct: 238 SLRSQ--KIVYISCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+V P R + FL+ V D+ CG H + + +G V++ G GQLG+ S
Sbjct: 19 EEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKR 74
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++ AL +V +S G H+ G +YAWG+ GQ+G+ G + + S
Sbjct: 75 PEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSL 134
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
S+ +++V VACG H+LAL + ++ G N++ QL +G + +
Sbjct: 135 SD------VQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKK 177
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I+CG DH ALT+EG VF++G G GQLG+ S+G + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G+
Sbjct: 289 FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGM 329
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E P + D+QNI V V+CG HTL L D ++ G+
Sbjct: 64 GQLGHEKSR----KRPEQVGA---LDAQNI--VAVSCGEAHTLTLNDKGQVYAWGFAADG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL G+ TR VP ++K + IV++ +++S LS
Sbjct: 115 QL----GLPGTEEYTR--VPRNIKSLSDVQIVQVACGYYHSLALS 153
>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 679
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 24/187 (12%)
Query: 18 HMPSRMDHFL----DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
++P++ F+ + +VT ++CG H LALT G +FSWG+ + GQLG+ D +M
Sbjct: 74 NLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGH-----DLDMV 128
Query: 73 ---EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
PR I++++ VVQIS G H A T G L+AWG N GQ+G+ V
Sbjct: 129 SYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATL 188
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG-----CGVSQVS 184
S + I + +ACG H+ A+ +++G G N + QL + C +Q+
Sbjct: 189 VKSLA------GIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLK 242
Query: 185 VMTRLSV 191
+ L V
Sbjct: 243 TLRSLGV 249
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 85/168 (50%), Gaps = 7/168 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P MD V ACG H L LT++G +++ GN GQLG+ ++ N P+ I A
Sbjct: 27 PREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNL-PNKRPQFISA 85
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V Q+S G HS A T G L++WG N GQ+G + LD+V + M S +
Sbjct: 86 LENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHD--LDMVSYPAPRMIKSIATKT 143
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
VV ++CG H LAL + L+ G NEY QL +G +V T
Sbjct: 144 ----VVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTAT 187
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IACG +H A+++ G +F WG + GQLG + D+ P +++ L LGV IS
Sbjct: 197 IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL--NDLDSRCYPTQLKTLRSLGVRYISC 254
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH--PMSWSEDFDSQNIKVVDVA 148
G S TQ+G ++ G GQ+G H H + F+ K+ +A
Sbjct: 255 GDDFSVFLTQEGGVFTCGLGTFGQLG---------HGTHGNEILPRMVFELMGSKITQIA 305
Query: 149 CGSRHTLAL 157
CG +HTLA
Sbjct: 306 CGRKHTLAF 314
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ G+LG + M PRE+ V Q + GG H+ T+DG LY G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ GQ+G + +L P +S E N V V+CG H+LAL + L+ G N
Sbjct: 63 NDHGQLGHDTN-NLPNKRPQFISALE-----NYIVTQVSCGLSHSLALTNWGQLFSWGSN 116
Query: 170 EYNQL 174
QL
Sbjct: 117 ATGQL 121
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ L V I+CG D + LTQEG VF+ G G+ GQLG+ + G + + PR +
Sbjct: 238 PTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNE--ILPRMVFE 295
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QI+ G H+ A
Sbjct: 296 LMGSKITQIACGRKHTLA 313
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4070 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4127
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4128 PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4185
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HT+A+ D S+ W G +Y +L +G ++ S
Sbjct: 4186 LEGY-----QIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSS 4232
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 77/143 (53%), Gaps = 19/143 (13%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS---QNIKVVDVACGSRHTL 155
T+DG LY WG + G++G H S S + + I V +V+CGS HT+
Sbjct: 527 TEDGELYTWGEGDFGRLG------------HGDSNSRNIPTLVKDIINVGEVSCGSSHTI 574
Query: 156 ALCDD-NSLWGCGWNEYNQLSMG 177
AL D ++W G + +L G
Sbjct: 575 ALSKDGRTVWSFGGGDNGKLGHG 597
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H +A++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4179 LPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4236
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4237 DILCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4284
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + D+A G+ HTLAL ++ G N QL +G
Sbjct: 4285 PQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG 4329
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELAATRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G H LAL DN ++ G N Q G
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVGG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + + DIA G +H LAL+ G V++WG+ S GQLG T+ EP +
Sbjct: 4285 PQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 4342
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4343 LQGKNVRQISAGRCHSAA 4360
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P + +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVGGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 91/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ + +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDIINVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
>gi|443697240|gb|ELT97775.1| hypothetical protein CAPTEDRAFT_180059 [Capitella teleta]
Length = 453
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 17/197 (8%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSG-L 83
L +T IACG H +AL+ EG +F+WG + GQ+G SGT +N PR++ A G
Sbjct: 127 LLGKRITAIACGSHHSMALSSEGEIFAWGQNNCGQVG---SGTTSNQPTPRKVTACIGSK 183
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
+ I+ G S A G ++ WG+N GQ+G+ ++ P+P N+
Sbjct: 184 KCISIACGQTSSIAAFDTGEVFGWGYNGNGQLGLGNNIN----QPNPCRL---VVLNNVF 236
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
+ +ACG HTL L D+ SL+ G N Y QL G + +S + R++V V++
Sbjct: 237 ITQIACGYAHTLGLTDEGSLYAWGANSYGQLGTGNKANMISPV-RIAVDLG----RFVEI 291
Query: 204 FAEHWNSARLSVPEHAK 220
A H+N ++ + K
Sbjct: 292 AATHYNHLSAALTQAGK 308
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P +++ + A G H LA T G V+SWG+ QLG S+ P
Sbjct: 67 PRKVEQLCKKNIVSFAYGSGPHVLATTNAGEVYSWGHNGYCQLGNGSTNQGPTPTPV-TS 125
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+L G + I+ G HS A + +G ++AWG NN GQVG + P P +
Sbjct: 126 SLLGKRITAIACGSHHSMALSSEGEIFAWGQNNCGQVGS----GTTSNQPTPRKVTACIG 181
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
S+ K + +ACG ++A D ++G G+N QL +G ++Q
Sbjct: 182 SK--KCISIACGQTSSIAAFDTGEVFGWGYNGNGQLGLGNNINQ 223
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ ++ +T IACG+ H L LT EG +++WG S GQLG +G ANM +R
Sbjct: 226 PCRLVVLNNVFITQIACGYAHTLGLTDEGSLYAWGANSYGQLG---TGNKANM-ISPVRI 281
Query: 80 LSGLG-VVQISAGGWH--SAARTQDGFLYAWGWNNGGQV 115
LG V+I+A ++ SAA TQ G ++ WG G V
Sbjct: 282 AVDLGRFVEIAATHYNHLSAALTQAGKVFMWGQCRGQSV 320
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA--NMEPREIRALSGLGVVQISAG-GWHS 95
+ + +T + V+S G+ G LG G+DA +EPR++ L +V + G G H
Sbjct: 33 NEAIVITNDDEVYSLGSNCSGCLGL---GSDAMSGLEPRKVEQLCKKNIVSFAYGSGPHV 89
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTL 155
A T G +Y+WG N Q+G G + P P + + ++ +ACGS H++
Sbjct: 90 LATTNAGEVYSWGHNGYCQLG-NGSTN---QGPTPTPVTSSLLGK--RITAIACGSHHSM 143
Query: 156 ALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
AL + ++ G N Q+ G +Q
Sbjct: 144 ALSSEGEIFAWGQNNCGQVGSGTTSNQ 170
>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
[Oxytricha trifallax]
Length = 2049
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS---------GTDA 70
P ++D F + CG H +A+T++ +SWG GQLG P S G +
Sbjct: 1711 PVKIDFFNKSKILTAVCGGLHTVAVTKDWEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEP 1770
Query: 71 N-MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ P+ I L GL + Q++ G HS A T+DG +Y WG +N GQ+G+ D +P
Sbjct: 1771 QVLTPQRIPKLEGLQIAQVACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGD--SFEPG 1828
Query: 130 -PMSWSEDFDSQNI------KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
M S+ ++ Q I K+ + CG+ TL D L+GCG N+ QL + + +
Sbjct: 1829 LGMEKSKVYEPQEINGLKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEE 1888
Query: 183 VSVMT 187
+ + +
Sbjct: 1889 MQIAS 1893
Score = 77.0 bits (188), Expect = 7e-12, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-------- 71
P R+ L + +ACG H +A+T++G ++ WG + GQLG SG
Sbjct: 1775 PQRIPKLEGLQIAQVACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKS 1834
Query: 72 --MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE--------GKL 121
EP+EI L + +I G + +T G LY G N+ GQ+G++ L
Sbjct: 1835 KVYEPQEINGLKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASL 1894
Query: 122 DLVVHDPHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDD--NSLWGCGWNEYNQL 174
+ V H + + Q I + +ACG H+LA+ D N LW G + QL
Sbjct: 1895 EKVKKGKHNQTSDVILPTRVICFQGIAIHQIACGESHSLAVSGDGMNMLWAWGMFKNGQL 1954
Query: 175 SMG 177
+G
Sbjct: 1955 GLG 1957
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 46/200 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-------SSGTDANM 72
P + D V+ ++ CG H + + G VF WG GQLG S+G + ++
Sbjct: 1624 PRMIISLKDEVIREVCCGNSHTMVINMSGQVFVWGANQTGQLGLGDNSPQILSAGYEHSI 1683
Query: 73 --------------------------EPREIRALSGLGVVQISAGGWHSAARTQDGFLYA 106
P +I + ++ GG H+ A T+D Y+
Sbjct: 1684 AITKSNELYIWGSGGLCGIGTLKQQNAPVKIDFFNKSKILTAVCGGLHTVAVTKDWEAYS 1743
Query: 107 WGWNNGGQVGV---------EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
WG GGQ+G+ +G+ D +P ++ + +++ VACG H++A+
Sbjct: 1744 WGLTEGGQLGLPQSTIVKLCQGQGD----EPQVLTPQRIPKLEGLQIAQVACGEAHSIAM 1799
Query: 158 CDDNSLWGCGWNEYNQLSMG 177
D +++G G + Y QL +G
Sbjct: 1800 TKDGTIYGWGQSNYGQLGLG 1819
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L M + P ++ ++ I CG L T +G ++ G GQLG + +
Sbjct: 1829 LGMEKSKVYEPQEINGLKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEE 1888
Query: 70 ---ANME---------------PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWN- 110
A++E P + G+ + QI+ G HS A + DG W W
Sbjct: 1889 MQIASLEKVKKGKHNQTSDVILPTRVICFQGIAIHQIACGESHSLAVSGDGMNMLWAWGM 1948
Query: 111 -NGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
GQ+G+ G++ + + +P P+ + S I+ +ACGS H++AL D +
Sbjct: 1949 FKNGQLGL-GEVTMKL-NPRPV---QSLCSSQIQ--RIACGSMHSVALIGDTN 1994
Score = 40.8 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 62/168 (36%), Gaps = 40/168 (23%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDAN----------MEPREIRALSGLGVVQISAGGWHSAA 97
GI+FS G + GQLG D + PR I +L + ++ G H+
Sbjct: 1588 GILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKVLYPRMIISLKDEVIREVCCGNSHTMV 1647
Query: 98 RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS-----------WSE----------- 135
G ++ WG N GQ+G+ ++ + S W
Sbjct: 1648 INMSGQVFVWGANQTGQLGLGDNSPQILSAGYEHSIAITKSNELYIWGSGGLCGIGTLKQ 1707
Query: 136 -------DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
DF +++ K++ CG HT+A+ D + G E QL +
Sbjct: 1708 QNAPVKIDFFNKS-KILTAVCGGLHTVAVTKDWEAYSWGLTEGGQLGL 1754
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Anolis carolinensis]
Length = 4963
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4158 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4215
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4216 PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL--PERVAA 4273
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ +VACG HTL + D S+ W G +Y +L +G ++ S
Sbjct: 4274 LEGY-----QIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAKSS 4320
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 471 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 528
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 529 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 571
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 572 SSHTIALSKDGRTVWSFGGGDNGKLGHG 599
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + ++ACG +H L ++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4267 LPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4324
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4325 DILCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4372
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + V D+A G+ HTLAL ++ G N QL +G
Sbjct: 4373 PQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLG 4417
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 565 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 622
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + ++VD++
Sbjct: 623 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELAATRIVDISI 674
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 675 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 715
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 658 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 716
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 717 LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 747
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V DIA G +H LAL+ G V++WG+ S GQLG T+ EP + +
Sbjct: 4373 PQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGL--GHTNHVREPTLVTS 4430
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4431 LQGKSVRQISAGRCHSAA 4448
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 605 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 661
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 662 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 718
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + ++ G+ H+LA
Sbjct: 719 ---GVAIQQISAGTSHSLA 734
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 514 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 569
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 570 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIE-----ALQGMFIRKVC 622
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 623 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 672
>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
Length = 953
Score = 88.6 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGV 85
D+ + +ACG+ H LAL++ VF WG GQLG GTD + P+ +++L G+
Sbjct: 32 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQTSPQLLKSLLGIPF 88
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+Q++AGG HS T G ++ WG N GQ+G+ + D V P+ + + SQ K+V
Sbjct: 89 MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL---KSLRSQ--KIV 141
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ CG HT AL + ++ G Y QL
Sbjct: 142 YICCGEDHTAALTKEGGVFTFGAGGYGQL 170
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 127 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 184
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V +I+ G H++A G +Y++G GQ+G
Sbjct: 185 FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 224
Score = 60.1 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + +A G H LT G +F WG GQLG + + P +++
Sbjct: 77 PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--NDENDRYVPNLLKS 134
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V I G H+AA T++G ++ +G GQ+G H ++ + F+
Sbjct: 135 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-------SHEINPRKVFEL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVSVMT 187
V ++ACG +HT A + ++ G QL G ++ S T
Sbjct: 188 MGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 236
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R I++LS + +VQ++ G +HS A ++ ++ WG N GQ+G+ D +
Sbjct: 25 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGT-------DCKKQTSP 77
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ S I + VA G H+ L +++G G N++ QL +
Sbjct: 78 QLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 120
>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
Length = 947
Score = 88.6 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGV 85
D+ + +ACG+ H LAL++ VF WG GQLG GTD + P+ +++L G+
Sbjct: 26 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQTSPQLLKSLLGIPF 82
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+Q++AGG HS T G ++ WG N GQ+G+ + D V P+ + + SQ K+V
Sbjct: 83 MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL---KSLRSQ--KIV 135
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ CG HT AL + ++ G Y QL
Sbjct: 136 YICCGEDHTAALTKEGGVFTFGAGGYGQL 164
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 121 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 178
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V +I+ G H++A G +Y++G GQ+G
Sbjct: 179 FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 218
Score = 60.1 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + +A G H LT G +F WG GQLG + + P +++
Sbjct: 71 PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--NDENDRYVPNLLKS 128
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V I G H+AA T++G ++ +G GQ+G H ++ + F+
Sbjct: 129 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-------SHEINPRKVFEL 181
Query: 140 QNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVSVMT 187
V ++ACG +HT A + ++ G QL G ++ S T
Sbjct: 182 MGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 230
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R I++LS + +VQ++ G +HS A ++ ++ WG N GQ+G+ D +
Sbjct: 19 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGT-------DCKKQTSP 71
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ S I + VA G H+ L +++G G N++ QL +
Sbjct: 72 QLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 114
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 21/154 (13%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
QL + V + VP ++K+ +++
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQI 139
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ +G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 134 PEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGL-TTTEDSVAVPRLIKK 192
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG +AWG N+ GQ+G+ + P S
Sbjct: 193 LNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEF------PSQASPQRVKSL 246
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + VA G H+ AL +++G G N QL +
Sbjct: 247 DGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGL 283
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + ++ ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 186 VPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQAS-----P 240
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +++L G+ + Q++AGG HS A + G ++ WG N GQ+G+ + D
Sbjct: 241 QRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDE-----QDRESPCHV 295
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CGS HT L ++ G QL
Sbjct: 296 KLLRTQ--KVVYISCGSDHTAVLTKTGGVFTFGAGSCGQL 333
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ACG +H + L ++G V++ G ++GQLG+ G+ +P +I AL+ ++ ++
Sbjct: 95 VKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGS----KPEQIGALADQHIIHVAC 150
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A + G L++WG + GQ+G+ D V +++ ++ V+CG
Sbjct: 151 GESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEM------ILQVSCG 204
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ H LAL D + G N + QL +G
Sbjct: 205 NWHCLALAADGQFFAWGQNSHGQLGLG 231
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 240 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGL--SDEQDRESPCHVKL 297
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 298 LRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEV----NPRRVLELMGS 353
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 354 E---VSQIACGRQHTLAFVPSSGLIYAFGCG 381
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 94/215 (43%), Gaps = 23/215 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG DH LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 303 VVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVN--PRRVLELMGSEVSQIAC 360
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP---------HPMSWSEDFDSQ 140
G H+ A G +YA+G GQ+G +L P P+S D +
Sbjct: 361 GRQHTLAFVPSSGLIYAFGCGIKGQLGSGHTCNLKCPSPVKGHWAAHNEPVSRRAD-ACK 419
Query: 141 NIKVVDVACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSVMT---RLSV---P 192
+ V + G T LC +NS + NQ + C ++ ++ T +LS P
Sbjct: 420 HYVVKHIFSGGDQTFVLCSERENSPPADDFRTINQSAYICSINDDTIDTWRQKLSEKKNP 479
Query: 193 EHVKNCPIVKLFAEHWNSARL--SVPEHAKDSSIV 225
V + A WN + L + EH K S +
Sbjct: 480 NSVNEVVQILSSAACWNGSFLEKKIDEHFKTSPKI 514
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S G G S+ +EPR + V +++ GG HS +DG +Y G N
Sbjct: 63 WGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTK 122
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + P + D Q+I + VACG H+LAL D L+ G
Sbjct: 123 GQLGHEKE----GSKPEQIGALAD---QHI--IHVACGESHSLALSDQGRLFSWGAGSDG 173
Query: 173 QLSMGCGVSQVSV 185
QL + V+V
Sbjct: 174 QLGLTTTEDSVAV 186
>gi|397472457|ref|XP_003807760.1| PREDICTED: LOW QUALITY PROTEIN: RCC1 domain-containing protein 1
[Pan paniscus]
Length = 377
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 158 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLVMA 214
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-----DLVVHD-------------- 127
+++AGGWHS ++ G +Y WGWN GQ+ + + + V +
Sbjct: 215 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRT 274
Query: 128 -------PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P P + F + V +CGSRHT + L+ GW +Y QL
Sbjct: 275 GGAEDGAPAPFIAVQPFPALPDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQL 333
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 65/171 (38%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ LV+ ++A G H + +++ G ++ WG GQL P+ D RE
Sbjct: 202 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 261
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G V+ S G H+A T+ G
Sbjct: 262 TELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALPDLPMGSDAVKASCGSRHTAVVTRTGE 321
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E L P + E F + ++V V CG +T
Sbjct: 322 LYTWGWGKYGQLGHEDTTSL--DRPRRV---EYFVDKQLQVKAVTCGPWNT 367
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 88/163 (53%), Gaps = 15/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P++++ + + +A G HCLAL+ EG V+SWG G G+LG+ + S D PR
Sbjct: 4537 PTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCD---RPRV 4593
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L G VV I+AGG HSA T +G LY WG G++G D P P E
Sbjct: 4594 IDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGDSED----QPRP-KLVEA 4648
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
S +VVD+ACGS TL + DD+++W G +Y +L G
Sbjct: 4649 LKS--YRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4689
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + F + D+ACG LA+T G V+SWG+G G+LG G D P+ I
Sbjct: 714 PMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLG--RGGNDGCKTPKVI 771
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV++ G S A T+ G +Y WG + ++G G D H HP E
Sbjct: 772 EKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLG-HGTED---HARHPKQI-EAL 826
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
S+ +K D+A GS H +A+ +D L+G G NE QL
Sbjct: 827 SSKKVK--DIAIGSLHCMAITEDGELYGWGRNEQGQL 861
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + + +P ++ V+ +A G H LALT +G VFSWG G G+LG+ S
Sbjct: 3531 LGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRW 3590
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL V I+ G HSAA T +G LY WG G++G G +
Sbjct: 3591 NCD---KPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLG-HGDNTTQLK 3646
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCGV 180
+ + + +VV VACGSR TLAL D+ ++ G ++ +L S GC V
Sbjct: 3647 PKQVKALAHE------RVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNV 3700
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ V DIACG H A+T G +++WG G G+LG+ + T ++P++++A
Sbjct: 3595 PRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTT--QLKPKQVKA 3652
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ VVQ++ G + A T +G +Y+WG + G++G G V PH + D
Sbjct: 3653 LAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNV--PHEVDRLRDQ 3710
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
KV + CG++ +LAL +W G +Y +L G
Sbjct: 3711 -----KVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHG 3745
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ V D+ACG L +T + V+SWG+G G+LG G+D P +I
Sbjct: 4643 PKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLG--RGGSDGCKVPMKI 4700
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G GV+++ G S A T+ G +Y WG + ++G G D V P +S
Sbjct: 4701 ETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLG-HGSDDH-VRRPRKVSA---- 4754
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN KV+DVACGS H +A D ++ G N+ QL G
Sbjct: 4755 -LQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDG 4793
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 22/145 (15%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P +D D V I CG LALT+ G V++WG G +LG+ GTDA++ +P+
Sbjct: 3699 NVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGH---GTDAHVRKPQI 3755
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPM 131
+ L G +V ++ G H A T G ++AWG N+ GQ G V K LVV + +
Sbjct: 3756 VEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPALVVLEGY-- 3813
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLA 156
K+ VACGS H++A
Sbjct: 3814 -----------KISKVACGSSHSIA 3827
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 15/177 (8%)
Query: 7 SGPLKMLSQVFHMPS--RMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLG 62
+G + ML P+ +++ F D V IA D H + LT +G VFSWGNG G+LG
Sbjct: 593 AGKVYMLYYTSLSPTLQQLNGFGDREVIRIASHPDGKHYMGLTSDGEVFSWGNGDGGKLG 652
Query: 63 YPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD 122
+ + EP I LSG V +I G +S A T +G +Y+WG N G++G D
Sbjct: 653 H--GDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSED 710
Query: 123 LVVHDPHPMSWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
P + + + ++VDVACGS TLA+ D +++ G +Y +L G
Sbjct: 711 QTT--PMLLKFFKGH-----RIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGRG 760
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 27/187 (14%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ D+ L I G +TQEG V++ G + G+LG + ++ PR+
Sbjct: 3485 IKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSV-PRQ 3543
Query: 77 IRALSG--LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I +LS + V + +GG HS A T DG +++WG + G++G H W+
Sbjct: 3544 ITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLG------------HFSRWN 3591
Query: 135 EDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
D ++ +V D+ACGS H+ A+ + L+ G EY +L G +Q+
Sbjct: 3592 CDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTTQLK----- 3646
Query: 190 SVPEHVK 196
P+ VK
Sbjct: 3647 --PKQVK 3651
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V + CG +ALT+ G V++WG G +LG+ + D P++I A
Sbjct: 768 PKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTE--DHARHPKQIEA 825
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED--- 136
LS V I+ G H A T+DG LY WG N GQ+G +P +++E
Sbjct: 826 LSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLG----------NPSISNFTEPTLI 875
Query: 137 --FDSQNIKVVDVACGSRHTLA 156
+ +NI + VACG T A
Sbjct: 876 GGMEGKNI--IGVACGPTQTFA 895
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4696 VPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSD--DHVRRPRKVS 4753
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL V+ ++ G H A T G +++WG N+ GQ+G +G + + P ++
Sbjct: 4754 ALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLG-DGTTN-AIQRPRLVA-----S 4806
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWN-----EYNQLSMGCGVSQVSVMTRLSVPE 193
K+ VACGS H+LA + ++ EYN L + ++ RL +
Sbjct: 4807 LLGKKINRVACGSAHSLAWSTNKAVSAGKLPSDIPMEYNHLQ---NIPITALRNRLILLH 4863
Query: 194 HVKN--CPIVKLFAEHWNSARLSV 215
H + CP + +F + N ++L V
Sbjct: 4864 HFSDLFCPSIPMF-DLQNRSQLEV 4886
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ V +ACG LALT EG V+SWG+G G+LG G++ P E+
Sbjct: 3647 PKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLG--RGGSEGCNVPHEV 3704
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L V QI G S A T+ G ++ WG + ++G D V P +
Sbjct: 3705 DRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLG--HGTDAHVRKPQIVE----- 3757
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+ L V E K
Sbjct: 3758 GLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQ--QGNGTTTVNRKPALVVLEGYKI 3815
Query: 198 CPIV--KLFAEHWNSARLSVP 216
+ + W + +SVP
Sbjct: 3816 SKVACGSSHSIAWATTDMSVP 3836
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ V DIA G HC+A+T++G ++ WG +GQLG PS EP I
Sbjct: 820 PKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPS--ISNFTEPTLIGG 877
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
+ G ++ ++ G + + W +GGQ V ++ +V
Sbjct: 878 MEGKNIIGVACGPTQT-----------FAWTSGGQWIVSSRVPFIV 912
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
VF WG + QLG P G+ + P LS L VQI G TQ+G +YA G
Sbjct: 3466 VFCWGLNDKDQLGGP-KGSKIKL-PTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGE 3523
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
G++G+ G V P ++ IK V V G RH+LAL D + WG G
Sbjct: 3524 ATNGRLGL-GITTGTVSVPRQIT---SLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEG 3579
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV--VQISAGGWH 94
G A+T EG VF+ G GT++ P ++ ++ + + + +++GG H
Sbjct: 4502 GEQTLFAVTAEGKVFA--TGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKH 4559
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVACGSRH 153
A + +G +Y+WG G++G + P DS + +VVD+A G H
Sbjct: 4560 CLALSAEGEVYSWGEGEDGKLGHGNR--------SPCDRPRVIDSLRGKEVVDIAAGGAH 4611
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
+ + + L+ G Y +L G
Sbjct: 4612 SACITANGELYTWGKGRYGRLGHG 4635
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQTSPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPS-----QTSP 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ KVV ++CG HT L ++ G QL G
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHG 277
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + ++ACG +H + L ++G V++ G S+GQLG+ G +P +I AL+ +V
Sbjct: 33 DRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGN----KPEQIGALADQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKY 361
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQ 173
+VV + G T LC +NS + NQ
Sbjct: 362 RVVKQIFSGGDQTFVLCSTYENSSPAVDFRTVNQ 395
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+ WG S GQ G S+ EP+ R +S + +++ GG HS +DG +Y G
Sbjct: 1 MLCWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ GQ+G E + + P + D +V VACG H+LAL D L+ G
Sbjct: 61 NSKGQLGHEREGN----KPEQIGALAD-----QHIVHVACGESHSLALSDRGQLFSWGAG 111
Query: 170 EYNQLSMGCGVSQVSV 185
QL + V+V
Sbjct: 112 SDGQLGLMTTEDSVAV 127
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALT-QEGIVFSWGNGSRGQLG 62
P R+ + VT IACG H LA G+++++G G+RGQLG
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 7/159 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ D + +ACG H LAL+ +G +FSWG GS GQLG ++ D+ PR I
Sbjct: 73 NQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTT-EDSVAVPRLI 131
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 132 QKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEF------PSQTSPQRVR 185
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 186 SLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG DHC+ L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSVKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGN----QPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALATDGQFFTWGKNSHGQLGLG 172
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G + EP+ +S V +++ GG H +DG +Y G N
Sbjct: 4 WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + + P + D Q+I + VACG H+LAL D L+ G
Sbjct: 64 GQLGHEREGN----QPEQIGALAD---QHI--IHVACGESHSLALSDQGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSV 185
QL + V+V
Sbjct: 115 QLGLMTTEDSVAV 127
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
PS + + V IACG H +ALT EG V++WG + GQ+G SG+ AN PR++
Sbjct: 142 PSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWGYNNCGQIG---SGSTANQGSPRKVT 198
Query: 79 ALSG-LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
A G ++ I+ G S T G +Y+WG+N GQ+GV V+ +P +
Sbjct: 199 ACIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQLGVGNN----VNQTNPCRVAA-- 252
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
Q + + V CG H LAL D+ ++G G N Y QL G ++ + T L V +
Sbjct: 253 -LQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQLGSG---NKANTCTPLQVATRIGR 308
Query: 198 CPIVKLFAEHWN 209
+V L A H++
Sbjct: 309 --VVCLAATHYS 318
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 9/166 (5%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P ++ F + ++ G H L LTQ+G V+SWG+ S QLG + GT P +
Sbjct: 89 PRLLESFSGQKIISLSAGSGPHVLVLTQDGGVYSWGHNSYMQLG--NGGTSPGTSPSLLS 146
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
VVQI+ G HS A T +G +Y WG+NN GQ+G + P +
Sbjct: 147 RNISNKVVQIACGSHHSMALTTEGEVYTWGYNNCGQIGSGS----TANQGSPRKVTACIG 202
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
N +++D+ CG +L + D ++ G+N QL +G V+Q +
Sbjct: 203 --NKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQLGVGNNVNQTN 246
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 21/152 (13%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG-GWHSAARTQDGFLYAWG 108
V+S G + G LG + +++EPR + + SG ++ +SAG G H TQDG +Y+WG
Sbjct: 67 VYSLGTNTSGCLGVGDN--SSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDGGVYSWG 124
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI--KVVDVACGSRHTLALCDDNSLWGC 166
N+ Q+G G P S S+NI KVV +ACGS H++AL + ++
Sbjct: 125 HNSYMQLGNGGT------SP---GTSPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTW 175
Query: 167 GWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
G+N Q+ G +Q S P V C
Sbjct: 176 GYNNCGQIGSGSTANQGS-------PRKVTAC 200
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P R+ +V+ + CG+ H LALT G+VF WG S GQLG SG AN P ++
Sbjct: 247 PCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQLG---SGNKANTCTPLQVA 303
Query: 79 ALSGLGVVQISAGGWH-SAARTQDGFLYAWG 108
G V + H SAAR Q G +Y WG
Sbjct: 304 TRIGRVVCLAATHYSHSSAARNQSGHIYMWG 334
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 21/154 (13%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
QL + V + VP ++K+ +++
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQI 139
>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
[Pongo abelii]
Length = 932
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 9 VPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQAS-----P 63
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D
Sbjct: 64 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-----KDRESPCHV 118
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CG HT L ++ G Y QL
Sbjct: 119 KLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQL 156
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 63 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 120
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 121 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV----NPRRVLELMGS 176
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 177 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 204
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 126 VVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 183
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 184 GRQHTLAFVPSSGLIYAFGCGARGQLGT 211
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
D+ PR I+ L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P
Sbjct: 5 DSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEF------P 58
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
S + I + VA G H+ AL +++G G N QL +
Sbjct: 59 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 106
>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 853
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 81/146 (55%), Gaps = 7/146 (4%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+ + DI+ G+ + A+T G V++WG +GQLG N PR IR+LS +V I
Sbjct: 230 IKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGN--PRVIRSLSNKSIVNI 287
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G H AA ++ G LY WG GQ+G GKL ++H P + + F+ Q K+V VA
Sbjct: 288 ACGRQHMAAISKSGDLYTWGLGVFGQLG-HGKLKSLLH-PKKVLY---FEQQQKKIVQVA 342
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
G+ T+A+ ++ L+ G EY QL
Sbjct: 343 TGANFTMAVSENGELFSFGHGEYGQL 368
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IACG H LA+T+ G V+SWG G G+LG+P A P I+AL +V+++
Sbjct: 36 IKQIACGEAHSLAVTEFGDVYSWGRGKEGELGHPQKAMTA--PPALIKALEHERIVKVAC 93
Query: 91 GGWHSAARTQDGFLYAWG 108
G +HS A T G +Y WG
Sbjct: 94 GNYHSLALTDTGKVYQWG 111
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT----------DANME---PREI 77
+ +A G + +A+++ G +FS+G+G GQLG D +++ P+++
Sbjct: 338 IVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQV 397
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSED 136
+AL + V +++ G H+ A T D +Y WGW + G +G + K LV +S E
Sbjct: 398 KALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEE- 456
Query: 137 FDSQNIKVVDVACGSRHTL 155
+ V+ G +HTL
Sbjct: 457 -------ISSVSGGEKHTL 468
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V S+G G +GQLG + ++P I+ L G + QI+ G HS A T+ G +Y+WG
Sbjct: 3 VISFGVGKQGQLGLDVNKD--QLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGR 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G++G K + P + + + + ++V VACG+ H+LAL D ++ G
Sbjct: 61 GKEGELGHPQK---AMTAPPALIKALEHE----RIVKVACGNYHSLALTDTGKVYQWG 111
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ +P ++ + V +ACG H +A+T + V++WG GS G LG+ + P+
Sbjct: 391 YSLPKQVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGF--GDRKFQLVPQR 448
Query: 77 IRALSGLGVVQISAGGWHS-AARTQDGFLYAWGWN 110
+ +LSG + +S G H+ R+ D +A+ +
Sbjct: 449 VPSLSGEEISSVSGGEKHTLIVRSSDTTTFAFDYK 483
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 21/154 (13%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
QL + V + VP ++K+ +++
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQI 139
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + P + D
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS-EECIRVPRNIKSLAD--- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG G D +
Sbjct: 122 EECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GLDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 ASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLADIQIVQVACGYYHSLALS 153
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + P + D
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS-EECIRVPRNIKSLAD--- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG G D +
Sbjct: 122 EECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GLDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 ASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL-LGSEEC-----IRVPRNIKSLADIQIVQVACGYYHSLALS 153
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ +G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 16/193 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKY 361
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSVMT-RLSVPEHVKNC 198
+V + G T LC +NS + NQ ++ ++ R + EH N
Sbjct: 362 HIVKQIFSGGDQTFVLCSKYENSSPAVDFRIMNQAHYTSLINDETIAVWRQKLSEH-NNA 420
Query: 199 PIVKLFAEHWNSA 211
+K+ EH+ ++
Sbjct: 421 NTIKI-DEHFKTS 432
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + + P + D Q+I + VACG H+LAL D L+ G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDQGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSV 185
QL + V+V
Sbjct: 115 QLGLMTTEDSVAV 127
>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P R++ DL + DIA G H ALT+EG V++WG G G+LG+ ++M
Sbjct: 240 TQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGF-GDDKSSHMV 298
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+++ L+G ++Q+S GG HS A T+DG ++++G + G++G K V HPM
Sbjct: 299 PQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRK----VTTGHPMEV 354
Query: 134 SEDFDSQNIKVVD---------VACGSRHTLALC 158
D D VACG RHTLA+
Sbjct: 355 PIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIA 388
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 94/175 (53%), Gaps = 16/175 (9%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G +K +S P R+ ++ V IA G H LALT++GI+++WGN GQLG +
Sbjct: 188 GDIKQIS----TPVRVQGLENVKV--IAVGAFHNLALTEDGILWAWGNNEYGQLG--TGD 239
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVH 126
T +P + LS L +V I+AGGWHS A T++G +YAWG G++G + K +V
Sbjct: 240 TQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVP 299
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
+ ED ++ V+CG H++AL D ++ G ++ +L G V+
Sbjct: 300 QKVELLAGED-------IIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVT 347
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 95/233 (40%), Gaps = 52/233 (22%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L V+ + G + LA+ +G +F+WG RG LG+P T P + AL+G+ +VQ
Sbjct: 44 LAVSAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPE-TKTESSPAPVDALAGVSIVQA 102
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-------------------------- 122
+ GGWH A G YAWG N GQ G E +
Sbjct: 103 AIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQV 162
Query: 123 --------LVVHDPHPMSWSEDFDSQNIKVVD-------------VACGSRHTLALCDDN 161
++ D H +W + + +IK + +A G+ H LAL +D
Sbjct: 163 AAGGTHSVVLTQDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDG 222
Query: 162 SLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
LW G NEY QL G ++ E + + +V + A W+S L+
Sbjct: 223 ILWAWGNNEYGQL----GTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALT 271
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L V +A G H + LTQ+G V++WG +P P ++ L + V+ +
Sbjct: 157 LKVRQVAAGGTHSVVLTQDGHVWTWGQP------WPPGDIKQISTPVRVQGLENVKVIAV 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDV 147
G +H+ A T+DG L+AWG N GQ+G D P S + ++ +VD+
Sbjct: 211 --GAFHNLALTEDGILWAWGNNEYGQLG--------TGDTQPRSQPIRVEGLSDLSLVDI 260
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
A G H+ AL + ++ G E+ +L G
Sbjct: 261 AAGGWHSTALTKEGEVYAWGRGEHGRLGFG 290
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 55/127 (43%), Gaps = 14/127 (11%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V +WG+G GQLG G + R + AL L V + AG +S A DG L+ WGW
Sbjct: 13 VLAWGSGEDGQLGM--GGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGW 70
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ---NIKVVDVACGSRHTLALCDDNSLWGC 166
N G +G H P + S + +V A G H LA+ D +
Sbjct: 71 NQRGTLG---------HPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAW 121
Query: 167 GWNEYNQ 173
G NEY Q
Sbjct: 122 GGNEYGQ 128
>gi|403173682|ref|XP_003332733.2| hypothetical protein PGTG_14398 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170648|gb|EFP88314.2| hypothetical protein PGTG_14398 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 694
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP--SSGTDANMEPRE 76
+P+R+ + + V+ + CG+DH LALT +G V+SWGNG + QLG + P
Sbjct: 337 VPTRVSNLREYPVSQVVCGYDHVLALTTDGHVYSWGNGQQQQLGRKIIERRKKNGLAPER 396
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK----LDLVVHDPHPMS 132
LS +V + GG HS A ++G +Y WG N GQ+G+ + + +V P P+
Sbjct: 397 ---LSLKKIVLLGTGGSHSFAVHENGTVYGWGLNTRGQLGISSEEAGWENEIVSVPTPIR 453
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+VV + G HTL L D+ +W G E ++ +
Sbjct: 454 AMAPDQHDGARVVAIEGGDFHTLFLLDNGQVWAVGNYENGEIGI 497
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 21/159 (13%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA-NMEPREIRALS----------- 81
+A G H L + G +++WG LG + G + E E R +S
Sbjct: 224 LAAGGMHTLVVDSAGKIWTWGINDNAALGRQTEGIEGVEQEELETRPMSVATLSPQPDPE 283
Query: 82 ----GLGVVQISAGGWHSAARTQDGFLYAWG--WNNGGQVGVEGKLDLVVHDPHPMSWSE 135
++ AG S A +++G L AWG +N G +G +G +V P + +
Sbjct: 284 SNRTPFKAARVCAGDSVSVAVSEEGELVAWGSFRSNDGLLGFDG---MVGTSPKQLVPTR 340
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + V V CG H LAL D ++ G + QL
Sbjct: 341 VSNLREYPVSQVVCGYDHVLALTTDGHVYSWGNGQQQQL 379
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q P+R+D V DI+CG H LA+ +G +SWG G +LG G D + E
Sbjct: 590 QCLRTPTRVD--FPHPVIDISCGTRHNLAVDNQGNAYSWGLGQSNELG---QGKDEDGEE 644
Query: 75 REI---------RALS------GLGVVQISAGGWHS 95
E+ +AL+ L VV+ +AGG HS
Sbjct: 645 IELLEAPKLLASKALTKGCERGALRVVRCAAGGTHS 680
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 89/164 (54%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ ++ + V +A G HCLAL+ EG V+SWG G G+LG+ G + + P+
Sbjct: 4028 VPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH---GNRLSYDRPK 4084
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I L G +V I+ GG HSAA T G+LY WG G++G D + P + +
Sbjct: 4085 LIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLT--PKLIEALQ 4142
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
D+ KV+DVACGS TL + DD+++W G +Y +L G
Sbjct: 4143 DY-----KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4181
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P +++ L V + CG +ALT+ G +++WG G +LG+ GTD ++ PR++
Sbjct: 4188 IPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGH---GTDDHVRRPRKV 4244
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G ++ I+ G H A T G ++ WG N+ GQ+G +G + P +
Sbjct: 4245 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG-DGTTS-ALQRPRLV-----H 4297
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4298 ALQGKKITRVACGSAHTLA 4316
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 30 VVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+V +ACG L +T GIVFSWG+G+ G+LG G D + P+ + L + V +
Sbjct: 610 MVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLG--RGGCDGSKTPKIVDKLLDINVAK 667
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+ GG SAA T G +Y WG ++G G D V + + D K V
Sbjct: 668 VYCGGQFSAALTAYGEVYTWGKGEAYRLG-HGNEDHV-------RYPKIIDILKTKKVKE 719
Query: 148 AC-GSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
C G+ H LAL +D ++G G N+Y Q+ G
Sbjct: 720 LCVGNLHVLALTEDQLIYGWGRNDYGQIDPALGT 753
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 13/169 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPR 75
+P + L IA G ++QEG +++ G G+ G+LG G D+N+ EP+
Sbjct: 2955 IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGL---GDDSNVCEPK 3011
Query: 76 EIRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
I LS + ++S +GG H+ A TQDG +++WG G++G + L P +
Sbjct: 3012 PIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISL--DKPRLI-- 3067
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
E S+ I+ D+ACGS H+ A+ L+ G EY +L G +Q
Sbjct: 3068 -ESLKSKRIR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQ 3113
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ + T + +P+ +++
Sbjct: 3064 PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQS--KPKLVQS 3121
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G ++QI+ G + A T DG +Y+WG + G++G G P+
Sbjct: 3122 LVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYT----PLL----I 3173
Query: 138 DSQN-IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D N + VV + CG++ +LAL +W G +Y +L G
Sbjct: 3174 DRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3214
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + + + IACG +ALT +G+V+SWG+G G+LG G+D P I
Sbjct: 3116 PKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLG--RGGSDGCYTPLLI 3173
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+GLGVVQI G S A T+ G ++ WG + ++G G +D H +
Sbjct: 3174 DRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG-HG------NDHHVRKPTLVE 3226
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ KV+ VA G+ H LA+ D ++ G N++ Q G +
Sbjct: 3227 GLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTI 3269
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
+ P +D L V I CG LALT+ G V++WG G +LG+ G D ++ +P
Sbjct: 3168 YTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH---GNDHHVRKPTL 3224
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G V+ ++ G H A T G +YAWG N+ GQ G +V P S +
Sbjct: 3225 VEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQG--NGTTIVNKKP---SLVHE 3279
Query: 137 FDSQNIKVVDVACGSRHTLA 156
D + +V V+CGS H++A
Sbjct: 3280 LD--DARVNRVSCGSSHSIA 3297
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ L + DIACG H A+T G +++WG G G+LG+ S + + P+
Sbjct: 4080 YDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDS--EDQLTPKL 4137
Query: 77 IRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I AL V+ ++ +G + T D +++WG + G++G G + PM
Sbjct: 4138 IEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI----PMKIE 4193
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4194 ---SLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4233
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDA-NMEP 74
P R+ F + + IA D H LALTQ+ V+SWGNG G+LG+ G A EP
Sbjct: 492 QYPQRVYGFSEKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGH---GDRAWYDEP 548
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ I AL + I+ G +SAA + +G LY WG N G++G G D V+ + +
Sbjct: 549 KLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLG-HGNSDNVMIPTLVTALN 607
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
VV VACGS + LC S W + N +G G
Sbjct: 608 GHM------VVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG 646
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV--VQISAGGWH 94
G A+T +G V++ G G+ G+LG GTD+ M P + ++ + V V +++GG H
Sbjct: 3994 GEQTLFAVTADGKVYATGYGAVGRLGI--GGTDSVMVPTLLESIQHVFVKKVAVNSGGKH 4051
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
A + +G +Y+WG + G++G +L +D P E ++ +VD+ACG H+
Sbjct: 4052 CLALSSEGHVYSWGEGDDGKLGHGNRLS---YD-RPKLIEELLGTE---IVDIACGGHHS 4104
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
A+ L+ G Y +L G Q++
Sbjct: 4105 AAITSAGWLYTWGKGRYGRLGHGDSEDQLT 4134
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P +LS L VQ++ G A T DG +YA
Sbjct: 3953 GAIYGWGHNHRGQLG-GLEGAKVKL-PVLCESLSALRPVQLTGGEQTLFAVTADGKVYAT 4010
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ G++G+ G ++V + E +K V V G +H LAL + ++ G
Sbjct: 4011 GYGAVGRLGIGGTDSVMVP-----TLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWG 4065
Query: 168 WNEYNQLSMGCGVS 181
+ +L G +S
Sbjct: 4066 EGDDGKLGHGNRLS 4079
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
Q V+ WG + QLG G+ + P LS L V I+ G +Q+G LY
Sbjct: 2932 QHSAVYVWGLNDKDQLG-GLKGSKIKL-PVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLY 2989
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
A G G++G+ D V +P P+ + + IK V V G +H LAL D ++
Sbjct: 2990 ACGEGTNGRLGLGD--DSNVCEPKPIPFLSQY---VIKKVSVHSGGKHALALTQDGKVFS 3044
Query: 166 CGWNEYNQLSMGCGVS 181
G E +L G +S
Sbjct: 3045 WGEGEDGKLGHGNSIS 3060
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +D V ++ G H LALT++ +++ WG GQ+ P+ GT EP
Sbjct: 706 PKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQID-PALGTVVP-EPTLCPT 763
Query: 80 LSGLGVVQISAGGWHSAA 97
LSG V+ ++ G S A
Sbjct: 764 LSGKNVIGLACGPTQSFA 781
>gi|297697477|ref|XP_002825883.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Pongo
abelii]
Length = 376
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLVMA 213
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-----DLVVHD-------------- 127
+++AGGWHS ++ G +Y WGWN GQ+ + + + V D
Sbjct: 214 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLVEDGETVAKDATELNEDGSQVKRT 273
Query: 128 -------PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P P + F + V +CGSRHT + L+ GW +Y QL
Sbjct: 274 GGAEDGAPAPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQL 332
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS------------G 67
P ++ LV+ ++A G H + +++ G ++ WG GQL P+
Sbjct: 201 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLVEDGETVAKDA 260
Query: 68 TDANMEPREIRALSG----------------------LG--VVQISAGGWHSAARTQDGF 103
T+ N + +++ G LG V+ S G H+A T+ G
Sbjct: 261 TELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGE 320
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E L P + E F + ++V V CG +T
Sbjct: 321 LYTWGWGKYGQLGHEDTTSL--DRPRRV---EYFVDKKLQVKAVTCGPWNT 366
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P R++ DL + DIA G H ALT+EG V++WG G G+LG+ ++M
Sbjct: 240 TQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGF-GDDKSSHMV 298
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+++ L+G ++Q+S GG HS A T+DG ++++G + G++G K V HPM
Sbjct: 299 PQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRK----VTTGHPMEV 354
Query: 134 SEDFDSQNIKVVD---------VACGSRHTLALC 158
D D VACG RHTLA+
Sbjct: 355 PIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIA 388
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 94/175 (53%), Gaps = 16/175 (9%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G +K +S P R+ ++ V IA G H LALT++GI+++WGN GQLG +
Sbjct: 188 GDIKQIS----TPVRVQGLENVKV--IAVGAFHNLALTEDGILWAWGNNEYGQLG--TGD 239
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVH 126
T +P + LS L +V I+AGGWHS A T++G +YAWG G++G + K +V
Sbjct: 240 TQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVP 299
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
+ ED ++ V+CG H++AL D ++ G ++ +L G V+
Sbjct: 300 QKVELLAGED-------IIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVT 347
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 95/233 (40%), Gaps = 52/233 (22%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L V+ + G + LA+ +G +F+WG RG LG+P T P + AL+G+ +VQ
Sbjct: 44 LAVSAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPE-TKTESSPAPVDALAGVSIVQA 102
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-------------------------- 122
+ GGWH A G YAWG N GQ G E +
Sbjct: 103 AIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQV 162
Query: 123 --------LVVHDPHPMSWSEDFDSQNIKVVD-------------VACGSRHTLALCDDN 161
++ D H +W + + +IK + +A G+ H LAL +D
Sbjct: 163 AAGGTHSVVLTQDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDG 222
Query: 162 SLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
LW G NEY QL G ++ E + + +V + A W+S L+
Sbjct: 223 ILWAWGNNEYGQL----GTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALT 271
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
+ L + +P R L V +A G H + LTQ+G V++WG +P
Sbjct: 141 RALRRDIPIPQRC--APKLKVRQVAAGGTHSVVLTQDGHVWTWGQP------WPPGDIKQ 192
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
P ++ L + V+ + G +H+ A T+DG L+AWG N GQ+G D P
Sbjct: 193 ISTPVRVQGLENVKVIAV--GAFHNLALTEDGILWAWGNNEYGQLG--------TGDTQP 242
Query: 131 MSWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S + ++ +VD+A G H+ AL + ++ G E+ +L G
Sbjct: 243 RSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFG 290
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 55/127 (43%), Gaps = 14/127 (11%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V +WG+G GQLG G + R + AL L V + AG +S A DG L+ WGW
Sbjct: 13 VLAWGSGEDGQLGM--GGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGW 70
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ---NIKVVDVACGSRHTLALCDDNSLWGC 166
N G +G H P + S + +V A G H LA+ D +
Sbjct: 71 NQRGTLG---------HPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAW 121
Query: 167 GWNEYNQ 173
G NEY Q
Sbjct: 122 GGNEYGQ 128
>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
Length = 1719
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 19/162 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ D++ G H +ALT+ G VFSWG G GQLG+ + T M P++I+A + ISA
Sbjct: 357 IVDMSLGGGHSMALTKRGEVFSWGRGENGQLGH-GTFTSQQMTPKQIQAFQNKTIKVISA 415
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD---------LVVHDPHPMSWSEDFDSQN 141
GG+HS A +G ++AWG + G +GV LD L+ + + S
Sbjct: 416 GGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAG 475
Query: 142 IKVVDVACGSRHTLALCDDNSL--WGCG-------WNEYNQL 174
+ ++V+ G +H +A ++ L WGCG NE NQL
Sbjct: 476 ERFINVSSGFQHNVAQTENGDLYSWGCGSGNRLGLANEENQL 517
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 78/146 (53%), Gaps = 8/146 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++C + A+++ G +++WG G G+LG+ S + P+++ +L G +V +S
Sbjct: 305 IIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQST--PKQVMSLHGHTIVDMSL 362
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG HS A T+ G +++WG GQ+G G P + + F ++ IKV ++ G
Sbjct: 363 GGGHSMALTKRGEVFSWGRGENGQLG-HGTFTSQQMTPKQI---QAFQNKTIKV--ISAG 416
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H++A+ + S++ G +Y L +
Sbjct: 417 GYHSIAIDTNGSMFAWGRGDYGVLGV 442
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 16/113 (14%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT---DANMEPRE 76
P ++ F + + I+ G H +A+ G +F+WG G G LG SS D N P
Sbjct: 399 PKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSLGDIN-SPVL 457
Query: 77 IR------------ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
I+ + +G + +S+G H+ A+T++G LY+WG +G ++G+
Sbjct: 458 IKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGCGSGNRLGL 510
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 8/100 (8%)
Query: 22 RMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRAL 80
R+D FL V I+ G H +T +G +++WG+G G+LG+ GT ++ EPR +
Sbjct: 155 RID-FLKEKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGH---GTLESYSEPRLVEFF 210
Query: 81 S---GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
L VV ++ GG H+ A T G +Y++G N+ Q+G+
Sbjct: 211 ETKPSLRVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGL 250
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 89/164 (54%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ ++ + V +A G HCLAL+ EG V+SWG G G+LG+ G + + P+
Sbjct: 3859 VPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH---GNRLSYDRPK 3915
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I L G +V I+ GG HSAA T G+LY WG G++G D + P + +
Sbjct: 3916 LIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLT--PKLIEALQ 3973
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
D+ KV+DVACGS TL + DD+++W G +Y +L G
Sbjct: 3974 DY-----KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4012
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P +++ L V + CG +ALT+ G +++WG G +LG+ GTD ++ PR++
Sbjct: 4019 IPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGH---GTDDHVRRPRKV 4075
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G ++ I+ G H A T G ++ WG N+ GQ+G +G + P +
Sbjct: 4076 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG-DGTTS-ALQRPRLV-----H 4128
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4129 ALQGKKITRVACGSAHTLA 4147
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ + T + +P+ +++
Sbjct: 2920 PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQS--KPKLVQS 2977
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+QI+ G + A T DG +Y+WG + G++G G P+
Sbjct: 2978 LVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYT----PLL----I 3029
Query: 138 DSQN-IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D N + VV + CG++ +LAL +W G +Y +L G
Sbjct: 3030 DRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3070
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPR 75
+P + L IA G ++QEG +++ G G+ G+LG G D+N+ EP+
Sbjct: 2811 IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGL---GDDSNVCEPK 2867
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
I LS + V + +GG H+ A TQDG +++WG G++G + L P +
Sbjct: 2868 PIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISL--DKPRLI-- 2923
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
E S+ I+ D+ACGS H+ A+ L+ G EY +L G +Q
Sbjct: 2924 -ESLKSKRIR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQ 2969
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + + V IACG +ALT +G+V+SWG+G G+LG G+D P I
Sbjct: 2972 PKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLG--RGGSDGCYTPLLI 3029
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+GLGVVQI G S A T+ G ++ WG + ++G G +D H +
Sbjct: 3030 DRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG-HG------NDHHVRKPTLVE 3082
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ K++ VA G+ H LA+ D ++ G N++ Q G +
Sbjct: 3083 GLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTI 3125
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
+ P +D L V I CG LALT+ G V++WG G +LG+ G D ++ +P
Sbjct: 3024 YTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH---GNDHHVRKPTL 3080
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G ++ ++ G H A T G +YAWG N+ GQ G +V P S +
Sbjct: 3081 VEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQG--NGTTIVNKKP---SLVHE 3135
Query: 137 FDSQNIKVVDVACGSRHTLA 156
D + +V V+CGS H++A
Sbjct: 3136 LD--DARVNRVSCGSSHSIA 3153
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +D LD+ V + CG ALT G V++WG G +LG+ D P+ I
Sbjct: 653 PKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGH--GNEDHVRYPKIIDI 710
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L + + G H A T+D +Y WG N+ GQ ++ L +V +P + F
Sbjct: 711 LKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQ--IDPALGTIVPEP---TLCPTFSG 765
Query: 140 QNIKVVDVACGSRHTLALC 158
+N V+ +ACG + A C
Sbjct: 766 KN--VIGLACGPTQSFAWC 782
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ L + DIACG H A+T G +++WG G G+LG+ S + + P+
Sbjct: 3911 YDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDS--EDQLTPKL 3968
Query: 77 IRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I AL V+ ++ +G + T D +++WG + G++G G + PM
Sbjct: 3969 IEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI----PMKIE 4024
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V+ V CGS+ ++AL +++ G +Y++L G
Sbjct: 4025 ---SLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4064
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 22 RMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM----EPR 75
R+ F + +T IA D H LALTQ+ V+SWGNG G+LG+ NM EP+
Sbjct: 493 RVYGFSEKPITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGH------GNMTWYDEPK 546
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I AL + I+ G +SAA + +G LY WG N G++G G D V P ++
Sbjct: 547 LIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLG-HGNSDKDVMIPTLVTALN 605
Query: 136 DFDSQNIKVVDVAC-GSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
VV VAC G R LC S W + N +G G
Sbjct: 606 GH-----MVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRG 645
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 49/212 (23%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ ++ +T IACG + AL+ G +++WG G+ G+LG+ +S D M P
Sbjct: 542 YDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDV-MIPTL 600
Query: 77 IRALSGLGVVQISAGGWHSAAR---TQDGFLYAWGWNNGGQVG------------VEGKL 121
+ AL+G VV ++ GG T G +++WG N G++G V+ L
Sbjct: 601 VTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLL 660
Query: 122 DLVVHDPH--------------PMSW--SEDFD-----------------SQNIKVVDVA 148
D+ V + +W ED+ + K+ D+
Sbjct: 661 DINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLY 720
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
G H LAL +D ++G G N++ Q+ G
Sbjct: 721 IGHLHVLALTEDQLVYGWGRNDHGQIDPALGT 752
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + L + G A+T +G V++ G G+ G+LG GTD+ M P +
Sbjct: 3807 LPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGI--GGTDSVMVPTLLE 3864
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + V V +++GG H A + +G +Y+WG + G++G +L +D P E
Sbjct: 3865 SIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLS---YD-RPKLIEEL 3920
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
++ +VD+ACG H+ A+ L+ G Y +L G Q++
Sbjct: 3921 LGTE---IVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLT 3965
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P +LS L VQ++ G A T DG +YA
Sbjct: 3784 GAIYGWGHNHRGQLG-GLEGAKVKL-PVLCESLSALRPVQLTGGEQTLFAVTADGKVYAT 3841
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ G++G+ G ++V + E +K V V G +H LAL + ++ G
Sbjct: 3842 GYGAVGRLGIGGTDSVMVP-----TLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWG 3896
Query: 168 WNEYNQLSMGCGVS 181
+ +L G +S
Sbjct: 3897 EGDDGKLGHGNRLS 3910
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
Q V+ WG + QLG G+ + P LS L V I+ G +Q+G LY
Sbjct: 2788 QHSAVYVWGLNDKDQLG-GLKGSKIKL-PVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLY 2845
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
A G G++G+ D V +P P+ + + IK V V G +H LAL D ++
Sbjct: 2846 ACGEGTNGRLGLGD--DSNVCEPKPIPFLSQY---VIKKVAVHSGGKHALALTQDGKVFS 2900
Query: 166 CGWNEYNQLSMGCGVS 181
G E +L G +S
Sbjct: 2901 WGEGEDGKLGHGNSIS 2916
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-----KDRESPCHV 236
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CG HT L ++ G Y QL
Sbjct: 237 KLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQL 274
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALASDGQFFTWGKNSHGQLGLG 172
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I + VACG H+LAL D L WG G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAG 111
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQTSPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-----KDRESPCHV 236
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CG HT L ++ G QL
Sbjct: 237 KLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G D V + +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG----HDSVNDEVNPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLAL + L +GCG
Sbjct: 295 E---VTQIACGRQHTLALVPSSGLIYAFGCG 322
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 302 GRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKY 361
Query: 143 KVVD-VACGSRHTLALCD--DNSLWGCGWNEYNQ 173
+VV + G T LC +NS + NQ
Sbjct: 362 RVVKQIFSGGDQTFVLCSTYENSSPAVDFRTVNQ 395
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+ WG S GQ G S+ EP+ R +S + +++ GG HS +DG +Y G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N GQ+G E + + P + D Q+I + VACG H+LAL D L+ G
Sbjct: 61 NTKGQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAG 111
Query: 170 EYNQLSMGCGVSQVSV 185
QL + V+V
Sbjct: 112 SDGQLGLMTTEDSVAV 127
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQTSPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-----KDRESPCHV 236
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CG HT L ++ G QL
Sbjct: 237 KLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G D V + +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG----HDSVNDEVNPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLAL + L +GCG
Sbjct: 295 E---VTQIACGRQHTLALVPSSGLIYAFGCG 322
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 302 GRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKY 361
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQ 173
+VV + G T LC +NS + NQ
Sbjct: 362 RVVKQIFSGGDQTFVLCSTYENSSPAVDFRTVNQ 395
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+ WG S GQ G S+ EP+ R +S + +++ GG HS +DG +Y G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N GQ+G E + + P + D Q+I + VACG H+LAL D L+ G
Sbjct: 61 NTKGQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAG 111
Query: 170 EYNQLSMGCGVSQVSV 185
QL + V+V
Sbjct: 112 SDGQLGLMTTEDSVAV 127
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L + ++ G QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQL 274
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L + G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T++G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS + G +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + + P + D Q+I + VACG H+LAL D L+ G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSV 185
QL + V+V
Sbjct: 115 QLGLTTTEDSVAV 127
>gi|348579534|ref|XP_003475534.1| PREDICTED: RCC1 domain-containing protein 1-like [Cavia porcellus]
Length = 373
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 90/200 (45%), Gaps = 36/200 (18%)
Query: 9 PLKMLSQVFHMP-SRMDHFL--DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
PL S V+ P H L +L + G +H L L G VFSWG G GQLG+ +
Sbjct: 132 PLLPSSHVYVSPWPPFRHCLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT 191
Query: 66 SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-------- 117
+ +EPR + AL GL + Q++AGGWHS ++ LY WGWN GQ+ +
Sbjct: 192 --LEMELEPRLLEALQGLPMAQVAAGGWHSVCVSETRDLYVWGWNESGQLALPARSLAED 249
Query: 118 ------EGK--------LDLVVHD----PHPMSWSEDFDS-----QNIKVVDVACGSRHT 154
EGK ++ V P P + F + + V +CGSRHT
Sbjct: 250 KRTVTGEGKGLNQEGSEVETVAGTEDGAPAPFIAVQPFPALLDLPLGSEAVGASCGSRHT 309
Query: 155 LALCDDNSLWGCGWNEYNQL 174
+ L+ GW +Y QL
Sbjct: 310 AVVTRTGELYTWGWGKYGQL 329
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 66/178 (37%), Gaps = 41/178 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS------------SG 67
P ++ L + +A G H + +++ ++ WG GQL P+ G
Sbjct: 198 PRLLEALQGLPMAQVAAGGWHSVCVSETRDLYVWGWNESGQLALPARSLAEDKRTVTGEG 257
Query: 68 TDANMEPREIRALSG----------------------LG--VVQISAGGWHSAARTQDGF 103
N E E+ ++G LG V S G H+A T+ G
Sbjct: 258 KGLNQEGSEVETVAGTEDGAPAPFIAVQPFPALLDLPLGSEAVGASCGSRHTAVVTRTGE 317
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDN 161
LY WGW GQ+G + L P E F + ++V V CG +T +N
Sbjct: 318 LYTWGWGKYGQLGHQDSASL----DRPCR-VEYFVHKQLQVKTVTCGPWNTYVYAVEN 370
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G Y QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQL 274
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALASDGQFFTWGKNSHGQLGLG 172
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVG--VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G EG + P + D ++ VACG H+LAL D L WG G
Sbjct: 64 GQLGHVREG------NKPEQIGALAD-----QHIIHVACGESHSLALSDRGQLFSWGAG 111
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQTSPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-----KDRESPCHV 236
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CG HT L ++ G QL
Sbjct: 237 KLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G D V + +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG----HDSVNDEVNPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLAL + L +GCG
Sbjct: 295 E---VTQIACGRQHTLALVPSSGLIYAFGCG 322
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 302 GRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKY 361
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQ 173
+VV + G T LC +NS + NQ
Sbjct: 362 RVVKQIFSGGDQTFVLCSTYENSSPAVDFRTVNQ 395
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+ WG S GQ G S+ EP+ R +S + +++ GG HS +DG +Y G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N GQ+G E + + P + D Q+I + VACG H+LAL D L+ G
Sbjct: 61 NTKGQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAG 111
Query: 170 EYNQLSMGCGVSQVSV 185
QL + V+V
Sbjct: 112 SDGQLGLMTTEDSVAV 127
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 96/182 (52%), Gaps = 20/182 (10%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ S S D PR
Sbjct: 3666 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCD---RPRV 3722
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 3723 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEA--- 3777
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGV-SQVSVMTRL 189
Q +VVD+ACGS TL L DD+++W G +Y +L S GC V +++ +T L
Sbjct: 3778 --LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGL 3835
Query: 190 SV 191
V
Sbjct: 3836 GV 3837
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P+++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 3824 KVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 3881
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 3882 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 3935
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 3936 -LQGKKVNRVACGSAHTLA 3953
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2618 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PR 2675
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 2676 QITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 2731
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 2732 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 2778
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 195 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYS 252
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 253 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 305
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 306 TLAVTENGQVWSWGDGDYGKLGRG 329
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 2780 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNVPQNI 2837
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 2838 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 2890
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 2891 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 2935
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ +V +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 2664 LGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 2723
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 2724 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 2771
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 2772 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 2831
Query: 179 GVSQ 182
V Q
Sbjct: 2832 NVPQ 2835
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 3783 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPTKIDSLTGLGVVKV 3840
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 3841 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 3893
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 3894 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3922
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 2728 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 2785
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G V P + E
Sbjct: 2786 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNV--PQNI---ERL 2840
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 2841 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2881
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 2832 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 2888
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 2889 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 2943
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 2944 LEGQ--KITRVACGSSHSVA 2961
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 337 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 393
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 394 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 447
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 448 DTKHI--VGIACGPAQSFA 464
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 242 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 299
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 300 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 352
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CGS+ ++AL D ++ G + +L G
Sbjct: 353 CGSQFSIALTKDGQVYSWGKGDNQRLGHG 381
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 3720 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 3777
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V
Sbjct: 3778 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------PTKI 3829
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 3830 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3870
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 131 PIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYNSD------------TLAPQLVQG 178
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P + S
Sbjct: 179 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKAISAFS 234
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 235 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 275
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3590 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3647
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 3648 GYGAGGRLGIGGTES--VSSP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 3702
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 3703 EAEDGKLGHG----SRSPCDRPRVIESLRGIEVVDVAAGGAHSA 3742
>gi|348506010|ref|XP_003440553.1| PREDICTED: RCC1 domain-containing protein 1-like [Oreochromis
niloticus]
Length = 396
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 84/178 (47%), Gaps = 34/178 (19%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L +A G +H + LT G V+SWG GS GQLG+ + EPR + AL G+ + ++
Sbjct: 167 LKARSLALGAEHAVLLTATGAVYSWGLGSHGQLGH--GVLTSEEEPRVVEALWGMSMTRV 224
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGV---------------EGKLDLVVHDPHPMSW 133
+ GGWHSA + G LY WGWN GQ+G+ G+L P
Sbjct: 225 ATGGWHSACISDGGDLYVWGWNESGQLGLPSRGLRKSQQKSSQQTGELCYDTSTPADEKL 284
Query: 134 SEDFDSQNI-----------------KVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
E+ + +++ ++ V+CGSRHT A+ L+ GW EY QL
Sbjct: 285 KEEEEHEDVFISIQAFPALLDVSPSCEIQTVSCGSRHTAAVTTTGDLYTWGWGEYGQL 342
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 68/174 (39%), Gaps = 42/174 (24%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE--- 76
P ++ + +T +A G H ++ G ++ WG GQLG PS G + +
Sbjct: 210 PRVVEALWGMSMTRVATGGWHSACISDGGDLYVWGWNESGQLGLPSRGLRKSQQKSSQQT 269
Query: 77 ---------------------------IRALSGL-------GVVQISAGGWHSAARTQDG 102
I+A L + +S G H+AA T G
Sbjct: 270 GELCYDTSTPADEKLKEEEEHEDVFISIQAFPALLDVSPSCEIQTVSCGSRHTAAVTTTG 329
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
LY WGW GQ+G + V P E F ++ ++V+DV CG+ +T A
Sbjct: 330 DLYTWGWGEYGQLGHQ----TVTSSDEPQR-VEFFRAEQMRVLDVVCGTWNTFA 378
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME- 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG G D +
Sbjct: 123 EYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GIDCKKQT 179
Query: 74 -PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL- 236
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 --KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F + V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +Y+WG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V Q++ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ + V + G H+ DG +Y G N+
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYSWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------LGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 79/140 (56%), Gaps = 11/140 (7%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
H LALT+EG V+SWG+G G+LG+ T EP + L+G V++IS G HSAA T
Sbjct: 28 HFLALTREGEVYSWGSGDGGKLGH--GDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVT 85
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RHTLAL 157
+G LY WG N G++G D +V P+ S + ++DVACGS HTLA
Sbjct: 86 SEGELYTWGRGNYGRLGHGSSEDQLV----PVLVS---GLRGHHIIDVACGSGDAHTLAA 138
Query: 158 CDDNSLWGCGWNEYNQLSMG 177
DD ++W G +Y +L G
Sbjct: 139 ADDGTVWSWGDGDYGKLGRG 158
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 88/172 (51%), Gaps = 23/172 (13%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
+KML + H+ VV +A G H +AL+ +G V+SWG G G+LG+
Sbjct: 3430 IKMLESLQHV----------VVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGH--GN 3477
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
++ PR I AL G GV+ IS GG HSA TQ+ LY WG G++G D ++
Sbjct: 3478 RNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLL-- 3535
Query: 128 PHPMSWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
P + + +V+DVACGS TL L DD+ +W G +Y +L G
Sbjct: 3536 PKVVEAL-----RGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRG 3582
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 11/146 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+ D+ACG H LA +G V+SWG+G G+LG G+D P+ I L GLGV ++
Sbjct: 123 IIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLG--RGGSDGCKNPKSIERLQGLGVCKV 180
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+DG ++ WG G ++G G D H HP E D ++ VVDV+
Sbjct: 181 YCGAQFSLALTRDGSVWTWGKGEGFRLG-HGTED---HVRHP-KLVEALDGKH--VVDVS 233
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
GS H LAL D ++ G N+ QL
Sbjct: 234 VGSIHCLALTDAGEVYCWGRNDQGQL 259
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 92/187 (49%), Gaps = 24/187 (12%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQL 61
L GPL S +P ++++ +V ++ G H +ALT EG +FSWG G G+L
Sbjct: 2485 RLGLGPL---SANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKL 2541
Query: 62 GYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
G+ G N + P+ I V +S G HSAA G LY WG G+ G G
Sbjct: 2542 GH---GNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGL---GEYGRLGH 2595
Query: 121 LDLVVH-DPHPMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL--- 174
D H P + + F S +V+D+ACGSR TLAL DD ++W G ++ +L
Sbjct: 2596 GDNYTHLKPKKV---QSFTSH--RVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRG 2650
Query: 175 -SMGCGV 180
S GC V
Sbjct: 2651 GSEGCSV 2657
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P +++ + L V+ + CG +ALT+ G V++WG G +LG+ G D ++ P+ +
Sbjct: 3589 IPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGH---GVDDHVRRPKRV 3645
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G V+ I+ G H A T G +Y WG N+ GQ+G +G + + P ++
Sbjct: 3646 AALQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLG-DGTTNAIAR-PRLVTA---- 3699
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HT+A
Sbjct: 3700 -LQGKKISRVACGSAHTIA 3717
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ F V DIACG LALT +G V+SWG+G G+LG G++ P +
Sbjct: 2604 PKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLG--RGGSEGCSVPNPV 2661
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G GV +++ G S A + G ++ WG + ++G G D V P +
Sbjct: 2662 EKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLG-HGN-DTHVRKPQIVD----- 2714
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
+ K+VDVA G+ H LA+ D ++ G N++ Q
Sbjct: 2715 GLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQ 2750
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +D F V D++CG H A+ G +++WG G G+LG+ + T +++P+++++
Sbjct: 2552 PKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGRLGHGDNYT--HLKPKKVQS 2609
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ V+ I+ G + A T DG +++WG + G++G G V P+P+ E
Sbjct: 2610 FTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSV--PNPV---EKL 2664
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q V VACG++ +LAL +W G +Y +L G
Sbjct: 2665 QGQG--VCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHG 2702
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 13/173 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P ++ V D+ACG L LT + V+SWG+G G+LG G+D P +
Sbjct: 3535 LPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLG--RGGSDGCKIPMK 3592
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ +L GLGV ++ G S A T+ G +Y WG + ++G +D V P ++
Sbjct: 3593 VESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLG--HGVDDHVRRPKRVAA--- 3647
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
Q KV+ +A GS H +A D ++ G N+ QL G G + RL
Sbjct: 3648 --LQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQL--GDGTTNAIARPRL 3696
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 10/151 (6%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L V IA G A++ +G VF+ G + G+LG + + PR+I LS V ++
Sbjct: 2454 LKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTV-PRQIENLSSFMVRKV 2512
Query: 89 S--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
S +GG H+ A T +G L++WG G++G +++ HP + F S ++ D
Sbjct: 2513 SVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNC----DHP-KLIDTFKSSCVR--D 2565
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++CGS H+ A+ L+ G EY +L G
Sbjct: 2566 MSCGSSHSAAILSSGELYTWGLGEYGRLGHG 2596
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 18/149 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ L V + CG LALT++G V++WG G +LG+ GT+ ++ P+ +
Sbjct: 166 PKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGH---GTEDHVRHPKLVE 222
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G VV +S G H A T G +Y WG N+ GQ+ G +D + P P S
Sbjct: 223 ALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQL---GDIDCQIR-PEPTLVS-GLA 277
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCG 167
S+ I V +ACG + A W C
Sbjct: 278 SKGI--VGIACGPAQSFA-------WSCA 297
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P+ ++ V +ACG LAL+ G+V++WG G +LG+ G D ++ +P+ +
Sbjct: 2657 VPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGH---GNDTHVRKPQIV 2713
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G +V ++ G H A T G ++AWG N+ GQ G V P ++ E
Sbjct: 2714 DGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQG--NNTTTVNRRPQLVNGLE-- 2769
Query: 138 DSQNIKVVDVACGSRHTLA 156
K+ VACGS H++A
Sbjct: 2770 ---GQKITRVACGSSHSIA 2785
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + I G A+T EG V++ G G G+LG + T +++ E
Sbjct: 3377 LPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATGYGHGGRLGLGGTDTVTSIKMLESL 3436
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+ V + +GG H+ A + DG +Y+WG + G++G + + +
Sbjct: 3437 QHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNR--------NSCDRPRVIE 3488
Query: 139 SQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ K V+D++CG H+ + ++ L+ G Y +L G
Sbjct: 3489 ALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHG 3528
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 74 PREIRALS-GLGVVQI--SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH-DPH 129
P E+ LS +VQ+ G H A T++G +Y+WG +GG++G H D
Sbjct: 5 PAELECLSRKCEIVQVVTHTDGKHFLALTREGEVYSWGSGDGGKLG---------HGDTS 55
Query: 130 PMSWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
P +V+ ++CGS H+ A+ + L+ G Y +L G Q+
Sbjct: 56 PREEPTLVTGLAGKQVIRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQL 110
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P+ I AL+ + VQI G A T +G +YA
Sbjct: 3354 GTIYGWGHNHRGQLGS-LEGAKVKL-PQTIEALASIRPVQIVGGEQTLFAVTAEGKVYAT 3411
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ + G G D V + E ++ V V G +H +AL D ++ G
Sbjct: 3412 GYGH-GGRLGLGGTDTVTS----IKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWG 3466
Query: 168 WNEYNQLSMG 177
+ +L G
Sbjct: 3467 EGDDGKLGHG 3476
>gi|395861750|ref|XP_003803141.1| PREDICTED: RCC1 domain-containing protein 1 [Otolemur garnettii]
Length = 376
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 88/204 (43%), Gaps = 38/204 (18%)
Query: 7 SGPLKMLSQVFHMPSRMDHFL-----DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQL 61
+G L +L SR F +L+ + G +H L L G VFSWG G GQL
Sbjct: 131 AGMLPLLPGACSYVSRKPPFYRTLAPELLARRLELGAEHALLLGWAGQVFSWGGGRHGQL 190
Query: 62 GYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---- 117
G+ S +A EPR + AL GL + +++AGGWHS ++ G +Y WGWN GQ+ +
Sbjct: 191 GHGS--LEAEPEPRLLEALQGLPMAEVAAGGWHSVCVSETGDVYVWGWNESGQLALPTRS 248
Query: 118 --------------------EGKLDLVVHD--PHPMSWSEDFDS-----QNIKVVDVACG 150
E K V D P P + F + +CG
Sbjct: 249 LAEDRAPAAVEATGLNKDESEVKRAAVGEDGAPAPFISIQPFPALLDLPLGSDAAKASCG 308
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
SRHT + L+ GW +Y QL
Sbjct: 309 SRHTAVVTRTGELYTWGWGKYGQL 332
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 61/171 (35%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ L + ++A G H + +++ G V+ WG GQL P+ + P + A
Sbjct: 201 PRLLEALQGLPMAEVAAGGWHSVCVSETGDVYVWGWNESGQLALPTRSLAEDRAPAAVEA 260
Query: 80 LS------------------------------------GLGVVQISAGGWHSAARTQDGF 103
G + S G H+A T+ G
Sbjct: 261 TGLNKDESEVKRAAVGEDGAPAPFISIQPFPALLDLPLGSDAAKASCGSRHTAVVTRTGE 320
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G + L P E F + ++V V CG +T
Sbjct: 321 LYTWGWGKYGQLGHKDTTSL----DRPCR-VEYFMDKQLQVKAVTCGPWNT 366
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
gallopavo]
Length = 4334
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 3540 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 3597
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 3598 PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 3655
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HT+A+ D S+ W G +Y +L +G ++ S
Sbjct: 3656 LEGY-----QIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKSS 3702
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H +A++ +G +V+++G+G G+LG +S A P+++
Sbjct: 3649 LPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 3706
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 3707 DILCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 3754
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + D+A G+ HTLAL ++ G N QL +G
Sbjct: 3755 PQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG 3799
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + + DIA G +H LAL+ G V++WG+ S GQLG T+ EP I
Sbjct: 3755 PQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGL--GHTNHVREPTLITV 3812
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 3813 LQGKNIRQISAGRCHSAA 3830
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + ++ G+ H+LA
Sbjct: 717 ---GVSIQQISAGTSHSLA 732
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIE-----ALQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 670
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F + V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +Y+WG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V Q++ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ + V + G H+ DG +Y G N+
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYSWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------LGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 529 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 587
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 588 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQTSPQRVRSL 641
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 642 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 678
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 581 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-----P 635
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 636 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 692
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 693 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 728
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 487 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIVH 542
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V + + Q I + V
Sbjct: 543 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP----RLIQKLNQQTI--LQV 596
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 597 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 626
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 635 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 692
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 693 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 748
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 749 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 776
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 698 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 755
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 756 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRCKY 815
Query: 143 KVVD-VACGSRHTLALCD--DNSLWGCGWNEYNQ 173
+V + G T LC +NS + NQ
Sbjct: 816 HIVKQIFSGGDQTFVLCSKYENSSPAVDFRTVNQ 849
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+ WG S GQ G S+ EP+ ++ V +++ GG HS +DG +Y G
Sbjct: 455 MLCWGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGL 514
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N GQ+G E + + P + D Q+I V VACG H+LAL D L+ G
Sbjct: 515 NTKGQLGHEREGN----KPEQIGALAD---QHI--VHVACGESHSLALSDRGQLFSWGAG 565
Query: 170 EYNQLSMGCGVSQVSV 185
QL + V+V
Sbjct: 566 SDGQLGLMTTEDSVAV 581
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 30/167 (17%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G +S
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG--------------LSDE 227
Query: 135 EDFDS-------QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
ED +S + KVV ++CG HT L ++ G QL
Sbjct: 228 EDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S + P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKY 361
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSVMT-RLSVPEHVKNC 198
+V + G T LC +NS + NQ ++ ++ R + EH
Sbjct: 362 HIVKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNAN 421
Query: 199 PI---VKLF--AEHWNSARL--SVPEHAKDS 222
I V++ A WN + L + EH K S
Sbjct: 422 TINGVVQILSSAACWNGSFLEKKIDEHFKTS 452
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I V VACG H+LAL D L WG G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--VHVACGESHSLALSDRGQLFSWGAG 111
>gi|114659014|ref|XP_523159.2| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Pan
troglodytes]
gi|332844685|ref|XP_003314905.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Pan
troglodytes]
gi|410207948|gb|JAA01193.1| RCC1 domain containing 1 [Pan troglodytes]
gi|410329461|gb|JAA33677.1| RCC1 domain containing 1 [Pan troglodytes]
Length = 380
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 81/178 (45%), Gaps = 33/178 (18%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+L + G +H L L G VFSWG G GQLG+ + +A +EPR + AL GL + +
Sbjct: 161 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT--LEAELEPRLLEALQGLVMAE 218
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-----DLVVHD--------------- 127
++AGGWHS ++ G +Y WGWN GQ+ + + + V +
Sbjct: 219 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTG 278
Query: 128 ------PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P P + F + V +CGSRHT + L+ GW +Y QL
Sbjct: 279 GAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQL 336
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 65/171 (38%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ LV+ ++A G H + +++ G ++ WG GQL P+ D RE
Sbjct: 205 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 264
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G V+ S G H+A T+ G
Sbjct: 265 TELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGE 324
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E L P + E F + ++V V CG +T
Sbjct: 325 LYTWGWGKYGQLGHEDTTSL--DRPRRV---EYFVDKQLQVKAVTCGPWNT 370
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQTSPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G D V + +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG----HDSVNDEVNPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLAL + L +GCG
Sbjct: 295 E---VTQIACGRQHTLALVPSSGLIYAFGCG 322
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 302 GRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKY 361
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQ 173
+VV + G T LC +NS + NQ
Sbjct: 362 RVVKQIFSGGDQTFVLCSTYENSSPAVDFRTVNQ 395
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G S+ EP+ R +S + +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + + P + D Q+I + VACG H+LAL D L+ G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSV 185
QL + V+V
Sbjct: 115 QLGLMTTEDSVAV 127
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQTSPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G D V + +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG----HDSVNDEVNPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLAL + L +GCG
Sbjct: 295 E---VTQIACGRQHTLALVPSSGLIYAFGCG 322
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 302 GRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKY 361
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQ 173
+VV + G T LC +NS + NQ
Sbjct: 362 RVVKQIFSGGDQTFVLCSTYENSSPAVDFRTVNQ 395
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G S+ EP+ R +S + +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + + P + D Q+I + VACG H+LAL D L+ G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSV 185
QL + V+V
Sbjct: 115 QLGLMTTEDSVAV 127
>gi|340501848|gb|EGR28585.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 612
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +++CG +H LAL V+SWGNG G LG+ S + P+ I L V I
Sbjct: 228 IINVSCGSEHTLALDNRNQVYSWGNGEGGLLGH--SNEEIQASPKIIDKFQDLQVEFIIC 285
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ--NIKVVDVA 148
GG HS A T+ G +Y+WG N GGQ+G+ D++ + + E Q + V +A
Sbjct: 286 GGLHSLALTKKGHVYSWGRNEGGQLGLNQ--DVLKDNLYFCCLPEKICGQLEGVFVKQIA 343
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC-PIVKLF 204
G H+LAL + ++G G+N QL +G Q ++S P+ +KN I K+F
Sbjct: 344 AGDAHSLALAQNGQVFGWGYNINGQLGLG----QQQSDKQVSEPKQIKNLQKIEKVF 396
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 29/163 (17%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME----PR 75
P +D F DL V I CG H LALT++G V+SWG GQLG N+ P
Sbjct: 269 PKIIDKFQDLQVEFIICGGLHSLALTKKGHVYSWGRNEGGQLGLNQDVLKDNLYFCCLPE 328
Query: 76 EI-RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSW 133
+I L G+ V QI+AG HS A Q+G ++ WG+N GQ+G+ + + D V +P +
Sbjct: 329 KICGQLEGVFVKQIAAGDAHSLALAQNGQVFGWGYNINGQLGLGQQQSDKQVSEPKQIKN 388
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ K+ V C CG N+ NQL +
Sbjct: 389 LQ-------KIEKVFC----------------CGLNDQNQLGI 408
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIR--------ALSGLGVVQISAGGWHSAART 99
G+++SWG + GQ+G N + R+I+ L ++Q+S G HS A T
Sbjct: 131 GVLYSWGQNTEGQMGNVYDPKTNNPKHRKIKINFPKLVYPLKDSIIIQVSCGYQHSVAIT 190
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF-DSQNIKVVDVACGSRHTLALC 158
+G + WG N+ Q+G L ++ P+ + + + QNI ++V+CGS HTLAL
Sbjct: 191 FNGNVLVWGDNSSSQLG------LGINSPNSIYYPVQIPNIQNI--INVSCGSEHTLALD 242
Query: 159 DDNSL--WGCG 167
+ N + WG G
Sbjct: 243 NRNQVYSWGNG 253
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLAL----TQEGIVFSWGNGSRGQLGYPSSGTDANM 72
++P RMD F + V ++CG +H LA T+ +VF+WG GQLG +G +++M
Sbjct: 446 IYIPKRMDCFYQMPVLHLSCGHNHSLAFVLADTKHYMVFAWGMNKHGQLGIGDTGQNSSM 505
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQD 101
R I L + ++ G +HS D
Sbjct: 506 -ARPITYLQDIIAYSMACGSYHSLLIIND 533
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 74 PREIRALSGLGVVQISAGGWHSAA----RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
P+ + + V+ +S G HS A T+ ++AWG N GQ+G+ G
Sbjct: 449 PKRMDCFYQMPVLHLSCGHNHSLAFVLADTKHYMVFAWGMNKHGQLGI-GDTGQNSSMAR 507
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
P+++ +D I +ACGS H+L + +D
Sbjct: 508 PITYLQD-----IIAYSMACGSYHSLLIIND 533
>gi|348681360|gb|EGZ21176.1| hypothetical protein PHYSODRAFT_490104 [Phytophthora sojae]
Length = 680
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 84/178 (47%), Gaps = 14/178 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S+ +P + L + +ACG H AL ++G VFSWG G G LG+ + + +
Sbjct: 183 SEAIGLPRVVHSLLHKRIVQVACGASHSFALAEDGDVFSWGVGRSGALGHGLNAVEQTFD 242
Query: 74 ----PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE------GKLDL 123
P E+ L G VVQIS G HSAA G L G + G++G + K +
Sbjct: 243 SVSSPMEVLTLKGRRVVQISCGEVHSAALLASGELLTCGQRDHGRLGRQIPRVDSPKRGI 302
Query: 124 VVH--DPHPMSWSED--FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V H D SW F + +K VACG+ HTL + + L+ GWN QL +G
Sbjct: 303 VTHSDDGECSSWFAPVIFPQRGVKCTYVACGAAHTLVIGRPHELYAFGWNSCGQLGVG 360
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 23 MDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGS--RGQLGYPSSGTDANMEPREIRAL 80
MD L ++ D+A G +H + +++G + +WG+ S R + + ++A PR + +L
Sbjct: 136 MDAALSRMLLDVASGDNHVVGASEQGYLLTWGDVSEFRPRSAVLAGDSEAIGLPRVVHSL 195
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWSE 135
+VQ++ G HS A +DG +++WG G +G VE D V PM E
Sbjct: 196 LHKRIVQVACGASHSFALAEDGDVFSWGVGRSGALGHGLNAVEQTFDSV---SSPM---E 249
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +VV ++CG H+ AL L CG ++ +L
Sbjct: 250 VLTLKGRRVVQISCGEVHSAALLASGELLTCGQRDHGRL 288
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 33/175 (18%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-------PSSGTDANMEPRE------- 76
V I+CG H AL G + + G G+LG P G + + E
Sbjct: 258 VVQISCGEVHSAALLASGELLTCGQRDHGRLGRQIPRVDSPKRGIVTHSDDGECSSWFAP 317
Query: 77 -IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I G+ ++ G H+ + LYA+GWN+ GQ+GV G D + P +++
Sbjct: 318 VIFPQRGVKCTYVACGAAHTLVIGRPHELYAFGWNSCGQLGVGGCRDR--YTPTRVTY-- 373
Query: 136 DFDSQ---------NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
FD+ + + V G H+LA D L+ G +E Q CG+S
Sbjct: 374 -FDAAVRSRGGALPALTIASVVAGKLHSLASSPDGRLFAWGSDEMGQ----CGLS 423
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
SR L + + G H LA + +G +F+WG+ GQ G SS P + +L
Sbjct: 380 SRGGALPALTIASVVAGKLHSLASSPDGRLFAWGSDEMGQCGL-SSCPQIYTLPHLVTSL 438
Query: 81 SGLGVVQISAGGWHSAART 99
GL V QI+AG HSA T
Sbjct: 439 VGLRVTQIAAGEAHSAVLT 457
>gi|426380328|ref|XP_004056825.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Gorilla
gorilla gorilla]
gi|426380330|ref|XP_004056826.1| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Gorilla
gorilla gorilla]
Length = 376
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLVMA 213
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-----DLVVHD-------------- 127
+++AGGWHS ++ G +Y WGWN GQ+ + + + V +
Sbjct: 214 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRT 273
Query: 128 -------PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P P + F + V +CGSRHT + L+ GW +Y QL
Sbjct: 274 GGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQL 332
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 65/171 (38%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ LV+ ++A G H + +++ G ++ WG GQL P+ D RE
Sbjct: 201 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 260
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G V+ S G H+A T+ G
Sbjct: 261 TELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGE 320
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E L P + E F + ++V V CG +T
Sbjct: 321 LYTWGWGKYGQLGHEDTTSL--DRPRRV---EYFVDKQLQVKAVTCGPWNT 366
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQTSPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G D V + +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG----HDSVNDEVNPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLAL + L +GCG
Sbjct: 295 E---VTQIACGRQHTLALVPSSGLIYAFGCG 322
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 302 GRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKY 361
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQ 173
+VV + G T LC +NS + NQ
Sbjct: 362 RVVKQIFSGGDQTFVLCSTYENSSPAVDFRTVNQ 395
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G S+ EP+ R +S + +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + + P + D Q+I + VACG H+LAL D L+ G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSV 185
QL + V+V
Sbjct: 115 QLGLMTTEDSVAV 127
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + D+ + +ACG+ H LAL++ VFSWG GQLG P+ I
Sbjct: 126 RVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGL-GYEYKKQASPQII 184
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
++L G+ QI+AGG HS T G ++ WG N GQ+G+ + D V P+ + +
Sbjct: 185 KSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLL---KSL 239
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
SQ K+V ++CG HT AL + ++ G Y QL
Sbjct: 240 RSQ--KIVYISCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R F++ V D+ CG H + + +G V++ G GQLG+ S P ++ A
Sbjct: 25 PRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKRPEQVGA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG+ GQ+G+ G + + S S+
Sbjct: 81 LDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLG 172
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I+CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G+
Sbjct: 289 FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGM 329
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E P + D+QNI V V+CG HTLAL D ++ G+
Sbjct: 64 GQLGHEKSR----KRPEQVG---ALDAQNI--VTVSCGEAHTLALNDKGQVYAWGFAVDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL G+S TR VP ++K + IV++ +++S LS
Sbjct: 115 QL----GLSGTEEYTR--VPRNIKSLSDIQIVQVACGYFHSLALS 153
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 30/167 (17%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G +S
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG--------------LSDE 227
Query: 135 EDFDS-------QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
ED +S + KVV ++CG HT L ++ G QL
Sbjct: 228 EDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S + P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I V VACG H+LAL D L WG G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--VHVACGESHSLALSDRGQLFSWGAG 111
>gi|410300174|gb|JAA28687.1| RCC1 domain containing 1 [Pan troglodytes]
Length = 378
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 159 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLVMA 215
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-----DLVVHD-------------- 127
+++AGGWHS ++ G +Y WGWN GQ+ + + + V +
Sbjct: 216 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRT 275
Query: 128 -------PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P P + F + V +CGSRHT + L+ GW +Y QL
Sbjct: 276 GGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQL 334
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 65/171 (38%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ LV+ ++A G H + +++ G ++ WG GQL P+ D RE
Sbjct: 203 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 262
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G V+ S G H+A T+ G
Sbjct: 263 TELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGE 322
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E L P + E F + ++V V CG +T
Sbjct: 323 LYTWGWGKYGQLGHEDTTSL--DRPRRV---EYFVDKQLQVKAVTCGPWNT 368
>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
Length = 2041
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 52/145 (35%), Positives = 84/145 (57%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGG 92
I CG H +ALT+EG VF WG GS+G LG +G ++E P +I +SGL +I+AG
Sbjct: 304 IVCGHHHTMALTEEGAVFIWGMGSQGCLG---NGRVDDLETPTQID-ISGLFFNEIAAGA 359
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
+HS A ++ +Y WG NN GQ+G+ K + ++ P +++ FD + I+ + CG +
Sbjct: 360 YHSLALAKNNQVYGWGVNNRGQLGIGNKENQLL--PKQLTF---FDRKKIQCQYLYCGDQ 414
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H+ + + L+ G +Y +L G
Sbjct: 415 HSACITTNKELYTWGNGDYYRLGHG 439
Score = 67.0 bits (162), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ D+ V D+A G H L +T EG V++WG+ LG P+ P+ +
Sbjct: 447 PKKIEILQDVYVLDVALGTIHSLCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGL 506
Query: 80 LS----GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSW 133
+S Q++AG HS + +++G LY WG N +GV +G+ V P +
Sbjct: 507 MSQSFRDASFYQVAAGTSHSLSLSENGHLYVWGSNKNSLLGVRLQGQEHTCV--PQKVEQ 564
Query: 134 SEDFDSQNIK 143
SED + I+
Sbjct: 565 SEDLEKSCIE 574
Score = 59.7 bits (143), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 36 CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHS 95
CG H +T +++WGNG +LG+ + MEP++I L + V+ ++ G HS
Sbjct: 411 CGDQHSACITTNKELYTWGNGDYYRLGHGMLLDE--MEPKKIEILQDVYVLDVALGTIHS 468
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS-WSEDFDSQNIKVVDVACGSRHT 154
T +GF+YAWG + +G+ + P + S+ F ++ VA G+ H+
Sbjct: 469 LCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSF--RDASFYQVAAGTSHS 526
Query: 155 LALCDDNSLWGCGWNEYNQLSM 176
L+L ++ L+ G N+ + L +
Sbjct: 527 LSLSENGHLYVWGSNKNSLLGV 548
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 82/169 (48%), Gaps = 9/169 (5%)
Query: 9 PLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
P +L + P + +F + ++ I+C ++HC+A+T +G + WG+ QLG +
Sbjct: 668 PPDILFEQSFTPIEIVYFRNTIIRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGL-GFQS 726
Query: 69 DANMEPREIR-ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
D P + A+ ++ G SA T G ++++G + G +G E K V+ +
Sbjct: 727 DHVFTPILLEGAIEQKVIIMAITGEKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIME 786
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
P ++ D S ++++AC ++ A+ LW G N++ QL +
Sbjct: 787 PRMIN---DIPS----MINLACSNQTMFAIDQKQQLWAWGNNQFGQLGI 828
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++D L +IA G H LAL + V+ WG +RGQLG + + P+++
Sbjct: 342 PTQID-ISGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGI--GNKENQLLPKQLTF 398
Query: 80 L--SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ + G HSA T + LY WG + ++G LD + +P + +D
Sbjct: 399 FDRKKIQCQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEM--EPKKIEILQD- 455
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ V+DVA G+ H+L + ++ ++ G ++ + L M
Sbjct: 456 ----VYVLDVALGTIHSLCITNEGFVYAWGSSKDSVLGM 490
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 44 LTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGF 103
LT +G V+S+G G LG+ MEPR I + + + ++ A Q
Sbjct: 757 LTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMINDIPSM--INLACSNQTMFAIDQKQQ 814
Query: 104 LYAWGWNNGGQVGVEGKLD 122
L+AWG N GQ+G+ + D
Sbjct: 815 LWAWGNNQFGQLGISLQRD 833
>gi|63054858|ref|NP_291022.2| RCC1 domain-containing protein 1 [Homo sapiens]
gi|63054860|ref|NP_001017919.1| RCC1 domain-containing protein 1 [Homo sapiens]
gi|190360155|sp|A6NED2.1|RCCD1_HUMAN RecName: Full=RCC1 domain-containing protein 1
gi|119622535|gb|EAX02130.1| RCC1 domain containing 1, isoform CRA_a [Homo sapiens]
gi|119622537|gb|EAX02132.1| RCC1 domain containing 1, isoform CRA_a [Homo sapiens]
gi|187954499|gb|AAI40709.1| RCC1 domain containing 1 [Homo sapiens]
gi|187954599|gb|AAI40710.1| RCC1 domain containing 1 [Homo sapiens]
Length = 376
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLVMA 213
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-----DLVVHD-------------- 127
+++AGGWHS ++ G +Y WGWN GQ+ + + + V +
Sbjct: 214 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRT 273
Query: 128 -------PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P P + F + V +CGSRHT + L+ GW +Y QL
Sbjct: 274 GGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQL 332
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 65/171 (38%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ LV+ ++A G H + +++ G ++ WG GQL P+ D RE
Sbjct: 201 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 260
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G V+ S G H+A T+ G
Sbjct: 261 TELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGE 320
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E L P + E F + ++V V CG +T
Sbjct: 321 LYTWGWGKYGQLGHEDTTSL--DRPRRV---EYFVDKQLQVKAVTCGPWNT 366
>gi|124804612|ref|XP_001348055.1| UVB-resistance protein UVR8 homologue [Plasmodium falciparum 3D7]
gi|23496310|gb|AAN35968.1| UVB-resistance protein UVR8 homologue [Plasmodium falciparum 3D7]
Length = 425
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 4/150 (2%)
Query: 18 HMPSRMDHFL--DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
++P R++ F D +I+CG H LALT+ G V+ G G G+LG + G E
Sbjct: 175 NIPKRVETFKNEDSEFINISCGEQHSLALTKNGKVYGCGKGEFGRLGKGNHGDQLFFEEI 234
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-DLVVHDPHPMSWS 134
+ + + + IS G SAA +++G +Y WG N+ GQ+G+E + DL H+ +P
Sbjct: 235 DYFVSNNIEIKDISCGHSFSAALSKNGDVYVWGRNDYGQLGIENSIGDLYSHEVYPNK-V 293
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
+ F+ +NIK+ +ACG H +A ++N ++
Sbjct: 294 KYFEIENIKIKYIACGDNHMIACSENNIIY 323
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 5/163 (3%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME----P 74
MP ++ F ++ + I+ G +H A +G +F++G +GQLG G + + P
Sbjct: 62 MPEKLSEFENVNIEKISAGCNHS-AFIIDGKIFTYGLNDKGQLGRTLDGNEKSQNYSLIP 120
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+E++ + + G H+ A ++ LY+WGW G G ++ +
Sbjct: 121 KEVKTNEDIKFTNVCCGYKHTLAIDENNELYSWGWGGNLFKGANGLGQGNKNNINIPKRV 180
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E F +++ + ++++CG +H+LAL + ++GCG E+ +L G
Sbjct: 181 ETFKNEDSEFINISCGEQHSLALTKNGKVYGCGKGEFGRLGKG 223
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKLDLVVH 126
+ N P ++ + + +ISAG HSA DG ++ +G N+ GQ+G ++G +
Sbjct: 58 EKNKMPEKLSEFENVNIEKISAGCNHSAF-IIDGKIFTYGLNDKGQLGRTLDGNEKSQNY 116
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
P E +++IK +V CG +HTLA+ ++N L+ GW
Sbjct: 117 SLIP---KEVKTNEDIKFTNVCCGYKHTLAIDENNELYSWGW 155
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F + V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +Y+WG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V Q++ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ + V + G H+ DG +Y G N+
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYSWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------LGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 85/156 (54%), Gaps = 11/156 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P + L + DIA G H ALT +G V+ WG G G+LG+ + + M
Sbjct: 233 TQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKML 292
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHD 127
P+++ L+G ++Q+S GG HS A T+DG ++++G + G++G K LD+ V
Sbjct: 293 PQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGCGRKVTTGQPLDVPVKI 352
Query: 128 PHPMSW----SEDFDSQNIKVVDVACGSRHTLALCD 159
P P +ED D + + V VACG RHTLA+ +
Sbjct: 353 PPPEGQFNDAAEDDDGKWVAKV-VACGGRHTLAIVE 387
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 16/188 (8%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G +K +S +P R+ ++ + IA G H LAL + G +++WGN GQLG +
Sbjct: 181 GDIKQIS----IPVRVQGLENVRL--IAVGAFHNLALEENGTLWAWGNNEYGQLG--TGD 232
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
T +P ++ L L +V I+AGGWHS A T G +Y WG G++G
Sbjct: 233 TQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKML 292
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
P ++ D ++ V+CG H++AL D ++ G ++ +L GCG +V+
Sbjct: 293 PQKVNLLAGED-----IIQVSCGGTHSVALTRDGRIFSFGRGDHGRL--GCG-RKVTTGQ 344
Query: 188 RLSVPEHV 195
L VP +
Sbjct: 345 PLDVPVKI 352
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 47/193 (24%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G + LA+ +G +F+WG RG LG+P N+ P +++AL+ + +VQ +
Sbjct: 40 VRSVVSGSRNSLAICDDGTLFTWGWNQRGTLGHPPETKTENI-PSQVKALANVKIVQAAI 98
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEG---------KLDLVV---------------- 125
GGWH A G YAWG N GQ G E + D+V+
Sbjct: 99 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAG 158
Query: 126 --------HDPHPMSWSEDFDSQNIKVVD-------------VACGSRHTLALCDDNSLW 164
+ H SW + + +IK + +A G+ H LAL ++ +LW
Sbjct: 159 GTHSVVLTREGHVWSWGQPWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALEENGTLW 218
Query: 165 GCGWNEYNQLSMG 177
G NEY QL G
Sbjct: 219 AWGNNEYGQLGTG 231
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
V +WG+G GQLG GT+ E + AL V + +G +S A DG L+ WG
Sbjct: 7 VIAWGSGEDGQLGL---GTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWG 63
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ-----NIKVVDVACGSRHTLALCDDNSL 163
WN G +G H P + +E+ SQ N+K+V A G H LA+ D
Sbjct: 64 WNQRGTLG---------HPPE--TKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRA 112
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTR--LSVPEHVKNCPIVKLFA 205
+ G NEY Q G ++ R + +P+ +V+ A
Sbjct: 113 YAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVA 156
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G +S EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I + VACG H+LAL D L WG G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAG 111
>gi|357520081|ref|XP_003630329.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524351|gb|AET04805.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 230
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 10/161 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANME-PRE 76
+P+++ F + + CG D+ +A ++ G V+SWG R Q G GT + P++
Sbjct: 54 LPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGCWGRNQNGELGLGTTKDSHVPQK 113
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I A G+ + ++AG HS A T+DG LY WGW G +G+ D ++ P ++ D
Sbjct: 114 ILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLI--PEKVNIDGD 171
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
K+V V+CG RHT+++ L+ GW++Y QL G
Sbjct: 172 ------KIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHG 206
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 13/148 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL +V SWG G GQLG+ TD + P ++ A G +V ++ G
Sbjct: 17 ISAGASHTVALLTGNVVCSWGRGEDGQLGHGD--TDDRLLPTKLSAFDGQDIVSVTCGAD 74
Query: 94 HSAARTQDGF-LYAWG-W--NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
++ AR++ G +Y+WG W N G++G+ D H P + + I++ VA
Sbjct: 75 YTVARSKSGKDVYSWGCWGRNQNGELGLGTTKD--SHVPQKI-----LAFEGIRIKMVAA 127
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H++A+ +D L+G GW Y L +G
Sbjct: 128 GAEHSVAITEDGDLYGWGWGRYGNLGLG 155
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H+P ++ F + + +A G +H +A+T++G ++ WG G G LG T+ + P ++
Sbjct: 109 HVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGD--TNDRLIPEKV 166
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+ G +V +S G H+ + + G LY GW+ GQ+G
Sbjct: 167 N-IDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLG 204
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+ ISAG H+ A + +WG GQ+G D ++ P +S FD Q+I
Sbjct: 14 VLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLL--PTKLS---AFDGQDI-- 66
Query: 145 VDVACGSRHTLALC---DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
V V CG+ +T+A D WGC W +G G ++ S + + + +V
Sbjct: 67 VSVTCGADYTVARSKSGKDVYSWGC-WGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMV 125
Query: 202 KLFAEH 207
AEH
Sbjct: 126 AAGAEH 131
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 81/149 (54%), Gaps = 17/149 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRALSGLGVVQISAGG 92
I G HCLAL+ EG V+SWG G G+LG+ + S D PR I +L G VV I+AGG
Sbjct: 4028 INSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCD---RPRAIESLRGKEVVDIAAGG 4084
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH-DPHPMSWSEDFDS-QNIKVVDVACG 150
HSA T G LY+WG G++G H D + + D+ + +V DVACG
Sbjct: 4085 AHSACITSTGELYSWGKGRYGRLG---------HGDSEDQTKPKLVDALKGYRVTDVACG 4135
Query: 151 S--RHTLALCDDNSLWGCGWNEYNQLSMG 177
S TL + DD+S+W G +Y +L G
Sbjct: 4136 SGDAQTLCITDDDSVWSWGDGDYGKLGRG 4164
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
HCLALT EG V+SWGNG G+LG+ + T + P I L G VV ++ G HSAA T
Sbjct: 489 HCLALTSEGDVYSWGNGDFGKLGHGDTVTCDS--PMLINELHGKSVVNVACGSHHSAAIT 546
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RHTLAL 157
G L+ WG + G++G+ D++ P +S + VVDVACGS T+AL
Sbjct: 547 ASGELFTWGRGSFGRLGLGSTEDILT--PALVS-----GLLGVTVVDVACGSGDAQTIAL 599
Query: 158 CDDNSLWGCGWNEYNQLSMG 177
D S++ G EY +L G
Sbjct: 600 ADTGSVYSWGDGEYGKLGRG 619
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +D VTD+ACG L +T + V+SWG+G G+LG G+D P +I
Sbjct: 4118 PKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLG--RGGSDGCKVPMKI 4175
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL GLGV+++ G S A T+ G +Y WG + ++G G D H P +
Sbjct: 4176 DALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLG-HGTED---HIRRPRRCT--- 4228
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K+V +ACGS H +A D ++ G N+ QL G
Sbjct: 4229 TLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDG 4268
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ GT+ ++ PR
Sbjct: 4171 VPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GTEDHIRRPRRC 4227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G +V I+ G H A T G +Y WG N+ GQ+G +G + + P ++
Sbjct: 4228 TTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4281
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWN-----EYNQL-SMGCGVSQVSVMTRLSV 191
Q K+ VACGS H+LA + + EYN L S+ V + RL +
Sbjct: 4282 -LQGKKINRVACGSAHSLAWSTNKPVNAGKLPAQIPMEYNSLQSLPINV----LRNRLVL 4336
Query: 192 PEHVKN--CPIVKLF 204
H+ + CP + +F
Sbjct: 4337 LHHISDLFCPCIPMF 4351
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS-GTDANMEPRE 76
P ++ V+ +A G H +ALT +G VFSWG G G+LG+ S D +PR
Sbjct: 2991 PRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCD---KPRL 3047
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL V I+ GG HSAA +G LY WG G++G H +
Sbjct: 3048 IEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGRLG---------HGDNTTQLRPK 3098
Query: 137 FDS--QNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCGV 180
+ +V+ VA GSR TLAL D +++ G ++ +L S GC V
Sbjct: 3099 LVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSV 3150
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P +D L VT + CG + A+ + G VF+WGNG +LG+ GT+ ++ PR++
Sbjct: 627 PKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGH---GTEEHVRFPRQVE 683
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
L+G V +S G H A T++G L +WG N+ GQ+G
Sbjct: 684 TLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLG 721
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 11/145 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P ++ + V I CG LALT+ G V++WG G +LG+ GTDA++ +P+ +
Sbjct: 3150 VPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGH---GTDAHVRKPQLV 3206
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V ++ G H + +G +YAWG N+ GQ G V P + E
Sbjct: 3207 ETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQG--NSTTTVNRKPALVQGLE-- 3262
Query: 138 DSQNIKVVDVACGSRHTLALCDDNS 162
K+ VACGS H++A C +S
Sbjct: 3263 ---GCKISRVACGSSHSIAWCTLDS 3284
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 21/165 (12%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P+ + L + V D+ACG +AL G V+SWG+G G+LG G++ P+ +
Sbjct: 573 PALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLG--RGGSEGCKAPKLV 630
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L GL V ++ G +SAA ++G ++ WG G ++G H F
Sbjct: 631 DKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLG------------HGTEEHVRF 678
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q V ++ GS H LA ++ L G N+ QL G
Sbjct: 679 PRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGEG 723
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV--V 86
L I G +TQ+G +F+ G + G+LG S + +PR++ +LS + V
Sbjct: 2947 LKCVQIVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVP-QPRQLTSLSQYVIKKV 3005
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
+ +GG H+ A T DG +++WG + G++G +++ P + E S+ ++ D
Sbjct: 3006 AVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI---EALRSKRVR--D 3058
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+ACG H+ A+ + L+ G EY +L G +Q+
Sbjct: 3059 IACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQL 3095
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
LALT G V+SWG+G G+LG G++ P I L+G+GV QI G S A T
Sbjct: 3119 QTLALTDSGTVYSWGDGDFGKLG--RGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALT 3176
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
+ G W W G + D V P + + KV VA G+ H L++ D
Sbjct: 3177 KSG--QVWTWGKGDYFRLGHGTDAHVRKPQLVE-----TLKGKKVTHVAVGALHCLSVLD 3229
Query: 160 DNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
+ ++ G N++ Q G S +V + ++ + ++ C I ++
Sbjct: 3230 NGQVYAWGDNDHGQQ----GNSTTTVNRKPALVQGLEGCKISRV 3269
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ V DIA G H +T G ++SWG G G+LG+ S + +P+ + A
Sbjct: 4066 PRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDS--EDQTKPKLVDA 4123
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V ++ +G + T D +++WG + G++G G V PM
Sbjct: 4124 LKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4175
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D+ Q + V+ V CGS+ ++AL +++ G +Y++L G
Sbjct: 4176 DALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4216
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V ++ACG H A+T G +F+WG GS G+LG S T+ + P + L G+ VV ++
Sbjct: 532 VVNVACGSHHSAAITASGELFTWGRGSFGRLGLGS--TEDILTPALVSGLLGVTVVDVAC 589
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A G +Y+WG G++G G P + Q + V V
Sbjct: 590 GSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEG--CKAPKLVD-----KLQGLDVTRVY 642
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG +++ A+C + +++ G E +L G
Sbjct: 643 CGPQYSAAVCKNGAVFTWGNGEGYKLGHG 671
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 21/149 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +AC + L L + G V+ N + Q + EI L+ + +++++A
Sbjct: 436 IIQVACSSNSLLILLRTGRVYKMTNSAEPQSMH------------EISTLADIEIIKLAA 483
Query: 91 --GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H A T +G +Y+WG G G G D V D PM +E VV+VA
Sbjct: 484 HSEGSHCLALTSEGDVYSWG---NGDFGKLGHGDTVTCD-SPMLINE---LHGKSVVNVA 536
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CGS H+ A+ L+ G + +L +G
Sbjct: 537 CGSHHSAAITASGELFTWGRGSFGRLGLG 565
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +++ VT ++ G HCLA T+EG + SWG +GQLG +G A EP
Sbjct: 677 RFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKA--EPAFA 734
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
+L G ++ I+ S+A+T +AW + G +
Sbjct: 735 ASLLGKCIIGITC----SSAQT-----FAWSRPSRGTM 763
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 49/120 (40%), Gaps = 8/120 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
VF WG + QLG P P LS L VQI G TQDG L+A G
Sbjct: 2916 VFVWGLNDKDQLGGPKGSKIKT--PGINETLSTLKCVQIVGGSKSLFCVTQDGKLFACGE 2973
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
G++G+ V P P + IK V V G RH +AL D + WG G
Sbjct: 2974 ATNGRLGLGISAGNV---PQPRQLT-SLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEG 3029
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 154 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 212
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 213 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 266
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 267 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 303
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 30/167 (17%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 206 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 260
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G +S
Sbjct: 261 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG--------------LSDE 306
Query: 135 EDFDS-------QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
ED +S + KVV ++CG HT L ++ G QL
Sbjct: 307 EDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 353
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 112 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIVH 167
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 168 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 221
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 222 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 251
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S + P ++
Sbjct: 260 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKL 317
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 318 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 373
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 374 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 401
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 323 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 380
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 381 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKY 440
Query: 143 KVVD-VACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSVMT-RLSVPEHVKNC 198
+V + G T LC +NS + NQ ++ ++ R + EH
Sbjct: 441 HIVKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNAN 500
Query: 199 PI---VKLF--AEHWNSARL--SVPEHAKDS 222
I V++ A WN + L + EH K S
Sbjct: 501 TINGVVQILSSAACWNGSFLEKKIDEHFKTS 531
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 83 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 142
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + + P + D Q+I V VACG H+LAL D L+ G
Sbjct: 143 GQLGHEREGN----KPEQIGALAD---QHI--VHVACGESHSLALSDRGQLFSWGAGSDG 193
Query: 173 QLSMGCGVSQVSV 185
QL + V+V
Sbjct: 194 QLGLMTTEDSVAV 206
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ GK P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL-GK-----EYPSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 30/167 (17%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG YPS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G +S
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG--------------LSDE 227
Query: 135 EDFDS-------QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
ED +S + KVV ++CG HT L ++ G QL
Sbjct: 228 EDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S + P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGAKGQLGT 329
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I V VACG H+LAL D L WG G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--VHVACGESHSLALSDRGQLFSWGAG 111
>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
Length = 870
Score = 87.4 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGV 85
D+ + +ACG+ H LAL++ VF WG GQLG G D + P+ I++L G+
Sbjct: 10 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GIDCKKQTSPQLIKSLLGIPF 66
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+Q++AGG HS T G ++ WG N GQ+G+ + D V P+ + + SQ K+V
Sbjct: 67 MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL---KSLRSQ--KIV 119
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ CG HT AL + ++ G Y QL
Sbjct: 120 YICCGEDHTAALTKEGGVFTFGAGGYGQL 148
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 105 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 162
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 163 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 202
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 10/169 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + +A G H LT G +F WG GQLG + + P +++
Sbjct: 55 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--NDENDRYVPNLLKS 112
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V I G H+AA T++G ++ +G GQ+G H ++ + F+
Sbjct: 113 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-------SHEINPRKVFEL 165
Query: 140 QNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVSVMT 187
V +ACG +HT A + ++ G QL G ++ S T
Sbjct: 166 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 214
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R I++LS + +VQ++ G +HS A ++ ++ WG N GQ+G+ +D + S
Sbjct: 3 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GIDCKKQTSPQLIKS 60
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + VA G H+ L +++G G N++ QL +
Sbjct: 61 ----LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 98
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 79 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 137
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 138 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 191
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 192 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 228
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 131 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 185
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D
Sbjct: 186 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-----KDRESPCHV 240
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CG HT L ++ G QL
Sbjct: 241 KLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 278
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 37 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIIH 92
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 93 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 146
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 147 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 176
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 185 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 242
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 243 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 298
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 299 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 326
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 248 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 305
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 306 GRQHTLAFVPSSGLIYAFGCGARGQLGT 333
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 8 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 67
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I + VACG H+LAL D L WG G
Sbjct: 68 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAG 115
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4052 LHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4109
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+++G + G++G+ + + P +S
Sbjct: 4110 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKL--PERVSA 4167
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMGCGVSQVS 184
E +V VACG HTLA+ D ++W G +Y +L +G ++ S
Sbjct: 4168 LEGH-----QVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAKSS 4214
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 464 HTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 521
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
++DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 522 SEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 564
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 565 SSHTIALSKDGRTVWSFGGGDNGKLGHG 592
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ V +ACG +H LA++ +G+ V+++G+G G+LG +S A P+++
Sbjct: 4161 LPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNS--TAKSSPQKV 4218
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4219 DVLCGIGIKKVACGTQFSVALTKDGNVYTFGQ------------DRLIGLPEGRARNHNR 4266
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTL L ++ G N QL +G
Sbjct: 4267 PQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLG 4311
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ + AL G+ + ++
Sbjct: 558 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVVEALQGMFIRKVC 615
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + +VVD++
Sbjct: 616 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELATTRVVDISI 667
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G H LAL DN ++ G N Q G
Sbjct: 668 GDSHCLALSHDNEVYAWGNNSMGQCGQG 695
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ V DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 651 PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVIG 709
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 710 LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 740
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + + D+A G +H L L+ G V++WG+ S GQLG T+ EP I A
Sbjct: 4267 PQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGL--GHTNHVREPTLISA 4324
Query: 80 LSGLGVVQISAGGWHSAA 97
L G + QISAG HSAA
Sbjct: 4325 LQGKNIQQISAGRCHSAA 4342
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A++++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 507 VVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 562
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 563 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVVE-----ALQGMFIRKVC 615
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + +V +
Sbjct: 616 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELATTRVVDI 665
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 598 YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 654
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ VV IS G H A + D +YAWG N+ GQ G +G + P +
Sbjct: 655 EELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKV-----I 708
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + ++ G+ H+LA
Sbjct: 709 GLDGVAIQQISAGTSHSLA 727
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 87.4 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 15/174 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG++H ++ +G +F+WGN S+GQLG+ + PR + ++ IS GG
Sbjct: 1037 VACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGE 1096
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS-EDFDSQNIKVVDVACGSR 152
HS A Q +Y+WG + GQ+G G L P + EDF KV+ +A G
Sbjct: 1097 HSVAVDQSFQIYSWGSSRYGQLG-HGVL-----TPQNLPKKIEDFTGGQ-KVLAIATGYA 1149
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAE 206
HT+ L L+ GWN+ QL +G +VP ++ IV + E
Sbjct: 1150 HTMVLKKSGDLFTFGWNDSGQLGLGN-------FKNRAVPMRIETSEIVGIHGE 1196
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 9/196 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R++ F + I+CG +H +A+ Q ++SWG+ GQLG+ T N+ P++I
Sbjct: 1077 PRRVETFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGH-GVLTPQNL-PKKIED 1134
Query: 80 LS-GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+ G V+ I+ G H+ + G L+ +GWN+ GQ+G+ + V P + SE
Sbjct: 1135 FTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAV--PMRIETSEIVG 1192
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
++ +A G H++ D+ ++ G N QL G + R + +K
Sbjct: 1193 IHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHG----NIEKSLRPKQIDELKGK 1248
Query: 199 PIVKLFAEHWNSARLS 214
PI+K+ H+++ +S
Sbjct: 1249 PIIKISCGHFHTVAIS 1264
Score = 70.1 bits (170), Expect = 7e-10, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 15/217 (6%)
Query: 18 HMPSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG---YPSSGTDANME 73
++P +++ F V IA G+ H + L + G +F++G GQLG + + +E
Sbjct: 1127 NLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIE 1186
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
EI + G + I+AG HS +G +Y+WG N+ GQ+G G ++ + P
Sbjct: 1187 TSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLG-HGNIEKSLR---PKQI 1242
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
E + ++ ++CG HT+A+ + NS++ C W + + +G G ++ + ++ E
Sbjct: 1243 DE---LKGKPIIKISCGHFHTVAISELNSVY-C-WGQGEHMCLGNGSNKNELSPKMI--E 1295
Query: 194 HVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAG 230
N I K+ +++A ++ E+ D V + G
Sbjct: 1296 FFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGG 1332
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T IA G H + G ++SWG S+GQLG+ + ++ P++I L G +++IS
Sbjct: 1198 ITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGH--GNIEKSLRPKQIDELKGKPIIKISC 1255
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +H+ A ++ +Y WG +G + + P + + N K+ V CG
Sbjct: 1256 GHFHTVAISELNSVYCWGQGEHMCLGNGSNKNEL--SPKMIEF-----FINKKIEKVVCG 1308
Query: 151 SRHTLAL------CDDNSLWGCGWNEYNQLSMG 177
HT + D +++ CG E+ +L G
Sbjct: 1309 LYHTATVTAAENGSDRGNVYICGGGEHGKLGTG 1341
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P ++D + I+CG H +A+++ V+ WG G LG +G++ N + P+ I
Sbjct: 1239 PKQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQGEHMCLG---NGSNKNELSPKMIE 1295
Query: 79 ALSGLGVVQISAGGWHSAART------QDGFLYAWGWNNGGQVGVEGKLDLVVHD-PHPM 131
+ ++ G +H+A T G +Y G G++G G L D PHP
Sbjct: 1296 FFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHP- 1354
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +S NI V + GS + + ++ +L+ G+ + Q+ G
Sbjct: 1355 AVIPSLNSMNI--VGFSSGSEFSAIITNNGALYTWGYGNFGQIGNG 1398
Score = 43.5 bits (101), Expect = 0.069, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
V ++ G H A + DG L+ WG N+ GQ+G L++ + P E F S I +
Sbjct: 1035 VSVACGWEHIAVISSDGELFTWGNNSQGQLG--HGLNVGKYQSTPRR-VETFKSSPI--I 1089
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
++CG H++A+ ++ G + Y QL G V+T ++P+ +++
Sbjct: 1090 MISCGGEHSVAVDQSFQIYSWGSSRYGQLGHG-------VLTPQNLPKKIED 1134
>gi|255569912|ref|XP_002525919.1| Protein pim1, putative [Ricinus communis]
gi|223534748|gb|EEF36439.1| Protein pim1, putative [Ricinus communis]
Length = 478
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 5/156 (3%)
Query: 23 MDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRAL 80
+D +LV +T ++CG H A++++G V++WG GS GQLG+ S + + PR + AL
Sbjct: 221 LDEAPELVKITRVSCGEYHTAAISEKGEVYTWGLGSTGQLGHTSLQSGNKELLPRRVVAL 280
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDF 137
G+ + ++ GG H+ A TQ G LYAWG + GQ+G+ G + D +
Sbjct: 281 DGILITDVACGGVHTCAVTQKGALYAWGGSQFGQLGLGPQTGSFSFIPSDTESFLRNIPA 340
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
V VACG HTL D + G G+N Y Q
Sbjct: 341 LVFPTGVQLVACGHSHTLICLRDGRIHGWGYNSYGQ 376
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG---- 82
L+ ++ ++CG H +AL+++G++ +WG GQLG + + PR I A +
Sbjct: 165 LNTIICQVSCGAVHVVALSEDGLLQAWGYNEYGQLGRGIT-CEGLQGPRVINAYAKFLDE 223
Query: 83 ----LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG----VEGKLDLVVHDPHPMSWS 134
+ + ++S G +H+AA ++ G +Y WG + GQ+G G +L+ +
Sbjct: 224 APELVKITRVSCGEYHTAAISEKGEVYTWGLGSTGQLGHTSLQSGNKELLPRRVVAL--- 280
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I + DVACG HT A+ +L+ G +++ QL +G
Sbjct: 281 -----DGILITDVACGGVHTCAVTQKGALYAWGGSQFGQLGLG 318
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 28/155 (18%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAG 91
DIACG +H A+ +G +F+WG GQLG GT+ + P++++ L V +S G
Sbjct: 66 DIACGREHTAAVASDGSLFTWGANEFGQLG---DGTEEGKKYPKKVKQLETEFVKSVSCG 122
Query: 92 GWHSAA----RTQDGF-----LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+AA R DG L+ WG N G +P +S F + N
Sbjct: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSN--------------YPRLFSGAF-ALNT 167
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V+CG+ H +AL +D L G+NEY QL G
Sbjct: 168 IICQVSCGAVHVVALSEDGLLQAWGYNEYGQLGRG 202
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSG------TDAN 71
+P R+ +++TD+ACG H A+TQ+G +++WG GQLG P +G +D
Sbjct: 273 LPRRVVALDGILITDVACGGVHTCAVTQKGALYAWGGSQFGQLGLGPQTGSFSFIPSDTE 332
Query: 72 MEPREIRALS-GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
R I AL GV ++ G H+ +DG ++ WG+N+ GQ E K + P P
Sbjct: 333 SFLRNIPALVFPTGVQLVACGHSHTLICLRDGRIHGWGYNSYGQAANE-KTTYAWY-PSP 390
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ W +V +A G H+ L D SL
Sbjct: 391 VDWCVG------EVRKLAAGGGHSAVLTDACSL 417
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD---SQNIKVVDVACGSRHTLALCDD 160
+Y WG+N+ GQ G +GK + + P +S E F N + +D+ACG HT A+ D
Sbjct: 23 IYVWGYNHNGQTGRKGK-EQELRIPKQLS-PELFGCPAGANARWLDIACGREHTAAVASD 80
Query: 161 NSLWGCGWNEYNQLSMG 177
SL+ G NE+ QL G
Sbjct: 81 GSLFTWGANEFGQLGDG 97
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D VV I+CG H LAL++ G V SWG+ GQLG+ + + P+ +R
Sbjct: 81 PLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQL-PKVVRQ 139
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VVQI+ G HS A T G LY+WG N GQ+GV DL H +P+ +
Sbjct: 140 LVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDL-THCNYPLRLTTLL-- 196
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + +ACG H+ + +++G G N QL +
Sbjct: 197 -GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 232
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDAN 71
++ +P + + V IACG +H LALT G ++SWG+ GQLG P T N
Sbjct: 128 KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCN 187
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P + L G+ + I+ GG HS ++ G ++ WG NN GQ+G+ + + +P
Sbjct: 188 Y-PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE----ANRAYPT 242
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ + V VACG ++ L ++ ++ CG Y QL G G S ++ R+
Sbjct: 243 QLK---TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL--GHGFSSNEMLPRM 295
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS++ D V +ACG H L LT G V++ G+ QLG+ P I
Sbjct: 31 PSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSNDHSQLGHEL----PTKRPLLIPE 86
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V+QIS G HS A ++ G + +WG N+ GQ+G + +V P +
Sbjct: 87 LQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKE-IVQLPKVVR-----QL 140
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
+ VV +ACG+ H+LAL L+ G N Y QL GV+ +T + P
Sbjct: 141 VSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL----GVNSPKDLTHCNYP 189
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 19/145 (13%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P R+ L + + IACG +H +++ G VF WG + GQLG A P ++
Sbjct: 187 NYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRAY--PTQL 244
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L LGV ++ G S T +G ++ G GQ+G H S +E
Sbjct: 245 KTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG------------HGFSSNEML 292
Query: 138 DSQNIK-----VVDVACGSRHTLAL 157
++ + VACG+RHTLAL
Sbjct: 293 PRMVMELMGSTITQVACGNRHTLAL 317
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ L V +ACG + + LT EG VF+ G G+ GQLG+ S + M PR +
Sbjct: 241 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE--MLPRMVME 298
Query: 80 LSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVV 125
L G + Q++ G H+ A G +YA+G + GQ+G L++
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLML 345
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ S GQLG + + P +I V Q++ G H+ T +G +YA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGS 66
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ Q+G E + P+ E Q+ V+ ++CGSRH+LAL + + G N
Sbjct: 67 NDHSQLGHE------LPTKRPLLIPE---LQDYVVIQISCGSRHSLALSEWGQVLSWGDN 117
Query: 170 EYNQL 174
+ QL
Sbjct: 118 DCGQL 122
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 25/213 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW----------SEDFDS 139
G H+ A G +YA+G GQ+G ++ P W ++ F
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKY 361
Query: 140 QNIKVVDVACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSV-MTRLSVPEHVK 196
+K + G T LC +NS + NQ ++ ++ M R + EH
Sbjct: 362 HIVK--QIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAMWRQKLSEHNN 419
Query: 197 NCPI---VKLF--AEHWNSARL--SVPEHAKDS 222
I V++ A WN + L + EH K S
Sbjct: 420 ANTINGVVQILSSAACWNGSFLEKKIDEHFKTS 452
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I + VACG H+LAL D L WG G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAG 111
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I + VACG H+LAL D L WG G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAG 111
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 92/173 (53%), Gaps = 26/173 (15%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 3605 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 3662
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+
Sbjct: 3663 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG--------------- 3707
Query: 134 SEDFDSQNIKVVD-VACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
++ N K+ + VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 3708 ----NTSNKKLPERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 3756
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 524
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 525 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 567
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 568 SSHTIALSKDGRTVWSFGGGDNGKLGHG 595
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 20/150 (13%)
Query: 34 IACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGG 92
+ACG +H LA++ +G +V+++G+G G+LG +S A P+++ L G+G+ +++ G
Sbjct: 3718 VACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKVDVLCGIGIKKVACGT 3775
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ-----NIKVVDV 147
S A T+DG +Y +G D ++ P + + + Q + + DV
Sbjct: 3776 QFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNRPQQVPVLAGVVIEDV 3823
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
A G+ HTLAL ++ G N QL +G
Sbjct: 3824 AVGAEHTLALASTGDVYAWGSNSEGQLGLG 3853
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 561 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 618
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 619 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDISI 670
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 671 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 711
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 654 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 712
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 713 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++D + + +ACG +ALT++G V+++G +G P + P+++
Sbjct: 3757 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPEGRARNHNRPQQVPV 3814
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
L+G+ + ++ G H+ A G +YAWG N+ GQ+G+
Sbjct: 3815 LAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 3852
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +V+ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 3809 PQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL--GHTNHVREPTLVTV 3866
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 3867 LQGKNVRQISAGRCHSAA 3884
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 601 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 657
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 658 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 714
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 715 ---GIAIQQISAGTSHSLA 730
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 510 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 565
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 566 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 618
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + IV +
Sbjct: 619 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIVDI 668
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I + VACG H+LAL D L WG G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAG 111
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKY 361
Query: 143 KVVD-VACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSVMT-RLSVPEHVKNC 198
+V + G T LC +NS + NQ ++ ++ R + EH
Sbjct: 362 HIVKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHSNAN 421
Query: 199 PI---VKLF--AEHWNSARL--SVPEHAKDS 222
I V++ A WN + L + EH K S
Sbjct: 422 TINGVVQILSSAACWNGSFLEKKIDEHFKTS 452
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I + VACG H+LAL D L WG G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAG 111
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
VT++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L VV I
Sbjct: 154 VTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVVNI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P S Q I+V VA
Sbjct: 211 ACGQMCSMAVVNTGEVYVWGYNGNGQLG----LGSSGNQPTPCRISA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC----GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+D L IAC H + T EG VF+WG+ + QLG + T+ + P
Sbjct: 89 PRRLD---SLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLMPC 143
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I LS V +++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 144 HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVT 199
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ + ++ G+N QL +G
Sbjct: 200 GCL--QNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLG 240
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG P I
Sbjct: 194 IPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPT--PCRI 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 252 SALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PAPVVVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC HT A
Sbjct: 309 -----RIIEIAACHLAHTSA 323
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPAPVV 304
Query: 80 LSGLGVVQISAG--GWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHLAHTSAAKTQGGHVYMWGQCRGQSV 342
>gi|332238752|ref|XP_003268565.1| PREDICTED: RCC1 domain-containing protein 1 [Nomascus leucogenys]
Length = 376
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 157 ELRARQLELGAEHALLLDAAGRVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLVMA 213
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-----DLVVHD-------------- 127
+++AGGWHS ++ G +Y WGWN GQ+ + + + V +
Sbjct: 214 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRT 273
Query: 128 -------PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P P + F + V +CGSRHT + L+ GW +Y QL
Sbjct: 274 GGAEDGAPAPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQL 332
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 68/171 (39%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS------------SG 67
P ++ LV+ ++A G H + +++ G ++ WG GQL P+
Sbjct: 201 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 260
Query: 68 TDANMEPREIRALSG----------------------LG--VVQISAGGWHSAARTQDGF 103
T+ N + +++ G LG V+ S G H+A T+ G
Sbjct: 261 TELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGE 320
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E L P E F + ++V V CG +T
Sbjct: 321 LYTWGWGKYGQLGHEDTTSL----DRPCR-VEYFVDKQLQVKTVTCGPWNT 366
>gi|255586057|ref|XP_002533695.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223526406|gb|EEF28690.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 478
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
++ F V +IACG H +T G + ++G G GQ G + T+ + P + AL
Sbjct: 295 AQASTFPGSYVKEIACGGRHSAIVTDTGALLTFGWGLYGQCGQGT--TNDQLRPACVPAL 352
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ 140
SG+ V+ I+AG WH+ + DG +Y +G N GQ+G D +P + ++ S+
Sbjct: 353 SGIKVISIAAGLWHTVCISADGHVYTFGGNQFGQLGT----DTDQTEPKQL-YAPSLGSK 407
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ K+ V+CG+RH+ L +D ++ GWN+Y QL +G
Sbjct: 408 HAKI--VSCGARHSAVLTEDGQVYSWGWNKYGQLGLG 442
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 71/170 (41%), Gaps = 33/170 (19%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS------------------SGTD--- 69
+T++A G H LAL+ G V+ WG G GQLG S SG D
Sbjct: 225 ITNVAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRIKMVSSPHLIPCIDASASGKDRSL 284
Query: 70 ----ANMEPR-EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
N+ P + G V +I+ GG HSA T G L +GW GQ G D +
Sbjct: 285 IVHQGNLTPSAQASTFPGSYVKEIACGGRHSAIVTDTGALLTFGWGLYGQCGQGTTNDQL 344
Query: 125 VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P IKV+ +A G HT+ + D ++ G N++ QL
Sbjct: 345 RPACVPA-------LSGIKVISIAAGLWHTVCISADGHVYTFGGNQFGQL 387
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 31/179 (17%)
Query: 64 PSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
PS + P + G+ + ++AGG H+ A + G ++ WG+ GQ+G+ ++ +
Sbjct: 204 PSGDEFFTVLPLMVTLAPGVRITNVAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRIKM 263
Query: 124 VVHDPH------------------------PMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
V PH P + + F +K ++ACG RH+ + D
Sbjct: 264 -VSSPHLIPCIDASASGKDRSLIVHQGNLTPSAQASTFPGSYVK--EIACGGRHSAIVTD 320
Query: 160 DNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEH 218
+L GW Y Q CG + R + + ++ + A W++ +S H
Sbjct: 321 TGALLTFGWGLYGQ----CGQGTTNDQLRPACVPALSGIKVISIAAGLWHTVCISADGH 375
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 75/206 (36%), Gaps = 59/206 (28%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
CGF +A++ G + +WG+ Y +SG + P VV+ +AG H
Sbjct: 63 GCGF--AMAISGSGNLITWGSTDEEGQSYLTSGKHGEI-PEPFPLPCEASVVKAAAGWAH 119
Query: 95 SAARTQDGFLYAWGW-------------NNGGQVGV----------EGKL---------- 121
+ T+ G ++ WGW N G Q + EG
Sbjct: 120 CVSVTETGEVFTWGWKECVPSVKIIQRDNTGKQNALLQTEKVSSRSEGSSLTRGTVLNSD 179
Query: 122 -----DLVVHDPHPMSWSEDFDSQ------------------NIKVVDVACGSRHTLALC 158
D +V EDF+S +++ +VA G RHTLAL
Sbjct: 180 SKRTGDEIVKRRRVSPTKEDFESSPSGDEFFTVLPLMVTLAPGVRITNVAAGGRHTLALS 239
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVS 184
D +WG G+ QL +G + VS
Sbjct: 240 DMGQVWGWGYGGEGQLGLGSRIKMVS 265
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-----KDRESPCHV 236
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CG HT L ++ G QL
Sbjct: 237 KLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I + VACG H+LAL D L WG G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAG 111
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
L + P D V ++ACG +H + L ++G V++ G ++GQLG+ G
Sbjct: 18 LQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN---- 73
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P +I AL+ ++ ++ G HS A + G L++WG + GQ+G+ D V P +
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI- 131
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + Q I + V+CG+ H LAL D + G N + QL +G
Sbjct: 132 --QKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
G H+ A G +YA+G GQ+G ++ P W+
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWA 346
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+ WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N GQ+G E + + P + D ++ VACG H+LAL D L+ G
Sbjct: 61 NTKGQLGHEREGN----KPEQIGALAD-----QHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 170 EYNQLSM 176
QL +
Sbjct: 112 SDGQLGL 118
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ ++ + + +A G HCLAL+ EG V+SWG G G+LG+ G + + P+
Sbjct: 4018 IPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGH---GNKMSYDRPK 4074
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I L G+ ++ I+ GG HSAA T G+LY WG G++G G D + P + +
Sbjct: 4075 LIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLG-HGDSDDQLR-PKVVEALQ 4132
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
D+ KV+DVACGS TL + DD+++W G +Y +L G
Sbjct: 4133 DY-----KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4171
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ GTD ++ PR++
Sbjct: 4178 VPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGH---GTDDHVRRPRKV 4234
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G ++ I+ G H A + G ++ WG N+ GQ+G +G +H P +
Sbjct: 4235 AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG-DGTTS-ALHRPRLV-----H 4287
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4288 ALQGKKITRVACGSAHTLA 4306
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ + V +ACG L +T GIVFSWG+G G+LG GTD + P+
Sbjct: 603 IPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLG--RGGTDGSKTPKI 660
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L + VV++ G SAA T G +Y WG + ++G G + H +P
Sbjct: 661 VDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLG-HGSEE---HVRYPKIIESL 716
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL--SMGCGVSQVSVMTRLS 190
D K+ D++ G+ H L L +D ++G G N+Y Q+ ++G +S+ ++ LS
Sbjct: 717 RDK---KIKDLSVGATHILVLTEDQFVYGWGRNDYGQIDPTLGSVISEPTLCPTLS 769
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P R+ F D +VT IA D H LALTQ+G V+SWGNG G+LG+ T + EP+ I
Sbjct: 498 PQRVHGFSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGH--GDTVSYDEPKLI 555
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL +V I+ G +SAA + G LY WG N G++G G D V M +
Sbjct: 556 EALLEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLG-HGNFDDV------MIPTLVT 608
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
+ VV VACGS + LC S W + + +G G + S + + + + +
Sbjct: 609 TLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPK--IVDKLLD 666
Query: 198 CPIVKLFAEHWNSARLS 214
+VK+F SA L+
Sbjct: 667 INVVKVFCGSQFSAALT 683
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 13/169 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPR 75
+P + L IA G ++QEG +++ G G+ G+LG G D N+ EP+
Sbjct: 2982 IKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGL---GDDNNVCEPK 3038
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
I LS + V + +GG H+ A TQDG +++WG G++G + L P +
Sbjct: 3039 PIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSL--DKPKLI-- 3094
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
E S+ I+ D+ACGS H+ A+ + L+ G EY +L G V+Q
Sbjct: 3095 -ETLKSKRIR--DIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQ 3140
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+ G +++WG G G+LG+ + T A P+ ++
Sbjct: 3091 PKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQA--RPKLVQT 3148
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGK----LDLVVHDPHPMSW 133
L G VVQ++ G + A T DG +Y+WG + G++G G LVV +
Sbjct: 3149 LVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLN---- 3204
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VV V CG++ +LAL +W G +Y +L G
Sbjct: 3205 -------GLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3241
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG +ALT +G V+SWG+G G+LG G+D P + L+GLGVVQ+
Sbjct: 3154 VVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLG--RGGSDGCYTPLVVERLNGLGVVQV 3211
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G +D H + + K+V VA
Sbjct: 3212 ECGAQFSLALTKYGEVWTWGKGDYFRLG-HG------NDHHVRKPTLVEGLRGKKIVHVA 3264
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3265 VGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTSVN 3298
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ L + + DIACG H A+T G +++WG G G+LG+ S D + P+
Sbjct: 4070 YDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDS--DDQLRPKV 4127
Query: 77 IRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ AL V+ ++ +G + T D +++WG + G++G G V P+
Sbjct: 4128 VEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV----PLK-- 4181
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + V+ V CGS+ ++AL +++ G +Y++L G
Sbjct: 4182 --IDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4223
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P +D LD+ V + CG ALT G V++WG G +LG+ G++ ++ P+ I
Sbjct: 658 PKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGH---GSEEHVRYPKIIE 714
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+L + +S G H T+D F+Y WG N+ GQ ++ L V+ +P +
Sbjct: 715 SLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQ--IDPTLGSVISEP---TLCPTLS 769
Query: 139 SQNIKVVDVACGSRHTLALC 158
S+ V+ +A G + A C
Sbjct: 770 SKT--VIGLASGPTQSFAWC 787
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + L +A G A+T +G V+S G G+ G+LG GTD+ M P +
Sbjct: 3966 LPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGI--GGTDSVMIPTLLE 4023
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + V +S+GG H A + +G +Y+WG + G++G K+ P +
Sbjct: 4024 SIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSY--DRPKLIE---- 4077
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D ++++D+ACG H+ A+ L+ G Y +L G
Sbjct: 4078 -DLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHG 4117
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
+ P ++ L V + CG LALT+ G V++WG G +LG+ G D ++ +P
Sbjct: 3195 YTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGH---GNDHHVRKPTL 3251
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + ED
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTSVNRKPSLVHELED 3309
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+V V+CGS H++A
Sbjct: 3310 -----ARVNRVSCGSSHSIA 3324
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P +LS L +Q++ G A T DG +Y+
Sbjct: 3943 GAIYGWGHNHRGQLG-GLEGPKVKL-PAPCESLSALRPIQLAGGEQTLFAVTADGKVYST 4000
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ G++G+ G +++ + E IK V V+ G +H LAL + ++ G
Sbjct: 4001 GYGAAGRLGIGGTDSVMIP-----TLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWG 4055
Query: 168 WNEYNQLSMGCGVS 181
+ +L G +S
Sbjct: 4056 EGDDGKLGHGNKMS 4069
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
QE V+ WG + QLG G+ + P LS L + I+ G +Q+G LY
Sbjct: 2959 QESAVYVWGLNDKDQLG-GLKGSKIKL-PVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLY 3016
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
A G G++G+ D V +P P+ + F IK V V G +H LAL D ++
Sbjct: 3017 ACGEGTNGRLGLGD--DNNVCEPKPIPFLSQF---VIKKVAVHSGGKHALALTQDGKVFS 3071
Query: 166 CGWNEYNQLSMGCGVS 181
G E +L G +S
Sbjct: 3072 WGEGEDGKLGHGNNMS 3087
>gi|410960604|ref|XP_003986879.1| PREDICTED: RCC1 domain-containing protein 1 [Felis catus]
Length = 320
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 34/178 (19%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L + G VFSWG G GQLG+ GT +A +EPR + AL G+ +
Sbjct: 102 ELRARRLELGAEHALLLDEAGQVFSWGQGRHGQLGH---GTLEAELEPRPLEALQGVPMA 158
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGV--------------------EGKLDLVVH 126
+++AGGWHS ++ G +Y WGWN GQ+ + E D+
Sbjct: 159 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLAEVGKTAAGEASGLKEDGCDVRTA 218
Query: 127 DPH-----PMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ P + F + V +CGSRHT + L+ GW +Y QL
Sbjct: 219 EGESGGLAPFIAIQPFPALLDLPPGTDAVKASCGSRHTAVVTRTGELYTWGWGKYGQL 276
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 40/170 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS------------- 66
P ++ + + ++A G H + +++ G ++ WG GQL PS
Sbjct: 146 PRPLEALQGVPMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLAEVGKTAAGEA 205
Query: 67 ------GTDANMEPREIRALS----------------GLGVVQISAGGWHSAARTQDGFL 104
G D E L+ G V+ S G H+A T+ G L
Sbjct: 206 SGLKEDGCDVRTAEGESGGLAPFIAIQPFPALLDLPPGTDAVKASCGSRHTAVVTRTGEL 265
Query: 105 YAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
Y WGW GQ+G + L P + + F + ++V V+CG +T
Sbjct: 266 YTWGWGKYGQLGHKDTSSL--DRPRRVEY---FVDRRLQVRAVSCGPWNT 310
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
L ++ G H+ + G +++WG GQ+G G L+ + +P P+ Q +
Sbjct: 103 LRARRLELGAEHALLLDEAGQVFSWGQGRHGQLG-HGTLEAEL-EPRPLE-----ALQGV 155
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ +VA G H++ + + ++ GWNE QL++
Sbjct: 156 PMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 189
>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Danio rerio]
gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
Length = 531
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 14/184 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI-RALSGLGVVQI 88
VT+++CG H LALT EG VF+WG + GQ+G SG+ AN PR++ L +V I
Sbjct: 130 VTEVSCGSHHSLALTHEGEVFAWGYNNCGQVG---SGSTANQPTPRKVSNCLQNKVIVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A T +G +Y WG+N GQ+G+ ++ + ++ Q V+ +A
Sbjct: 187 ACGQTSSMAVTDNGEVYGWGYNGNGQLGLG-------NNGNQLTPCRLIALQGFCVLQIA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
G H+LAL D+ L+ G N Y QL G +Q+S + ++ E + I + H
Sbjct: 240 SGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQVMTEKERI--VEIAACHSTHT 297
Query: 209 NSAR 212
++A+
Sbjct: 298 SAAK 301
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 9/146 (6%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H L +T++G +++WG+ QLG + T+ + P + L G V ++S G HS A
Sbjct: 86 HVLLVTEDGELYAWGHNGYSQLG--NGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLAL 143
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T +G ++AWG+NN GQVG + P P S QN +V++ACG ++A+
Sbjct: 144 THEGEVFAWGYNNCGQVGSGS----TANQPTPRKVSNCL--QNKVIVNIACGQTSSMAVT 197
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVS 184
D+ ++G G+N QL +G +Q++
Sbjct: 198 DNGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 10/138 (7%)
Query: 20 PSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P ++ + L + V+ +IACG +A+T G V+ WG GQLG ++G + P +
Sbjct: 171 PRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQ--LTPCRLI 228
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G V+QI++G HS A T +G LYAWG N GQ+G K + +S +
Sbjct: 229 ALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNK-------SNQLSPVQVMT 281
Query: 139 SQNIKVVDVACGSRHTLA 156
+ V AC S HT A
Sbjct: 282 EKERIVEIAACHSTHTSA 299
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 35 ACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
AC F + + +T + V+ G LG + + + + P+++ LSG ++ +S
Sbjct: 24 ACIFGASANEAIYITHDDEVYVLGLNCSNCLG--TGDSQSTIAPKKLDCLSGKKLISLSY 81
Query: 91 G-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G G H T+DG LYAWG N Q+G G + V P+ S + Q +V +V+C
Sbjct: 82 GSGPHVLLVTEDGELYAWGHNGYSQLG-NGTTNQGV---SPILVSTNL--QGKRVTEVSC 135
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
GS H+LAL + ++ G+N Q+ G +Q P V NC
Sbjct: 136 GSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQ-------PTPRKVSNC 177
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ V IA G+ H LALT EG++++WG + GQLG +G +N + P ++
Sbjct: 224 PCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPVQVM 280
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+V+I+A SAA+TQ G +Y WG G +
Sbjct: 281 T-EKERIVEIAACHSTHTSAAKTQSGQVYMWGQCRGQAI 318
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ ++ + + +A G HC+AL+ EG V+SWG G G+LG+ G + + P+
Sbjct: 4069 IPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGH---GNKVSYDRPK 4125
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I L G+ +V I+ GG HSAA T G+LY WG G++G G D + P + +
Sbjct: 4126 LIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLG-HGDSDDQLR-PKVVEALQ 4183
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
D+ KV+DVACGS TL + DD+++W G +Y +L G
Sbjct: 4184 DY-----KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4222
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ GTD ++ PR++
Sbjct: 4229 VPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGH---GTDDHVRRPRKV 4285
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G ++ I+ G H A + G ++ WG N+ GQ+G +G +H P +
Sbjct: 4286 AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG-DGTTS-ALHRPRLV-----H 4338
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4339 ALQGKKITRVACGSAHTLA 4357
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 30 VVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
V +ACG L +T GIVFSWG+G G+LG GTD + P+ + L + VV+
Sbjct: 673 TVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLG--RGGTDGSKTPKIVDKLLDINVVK 730
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+ G SAA T G +Y WG + ++G G + H +P D KV D+
Sbjct: 731 VFCGSQFSAALTAHGEVYTWGKGDAYRLG-HGSEE---HVRYPKVIESLRDR---KVKDL 783
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQL--SMGCGVSQVSVMTRLS 190
+ G+ H LAL +D ++G G N+Y Q+ ++G +S+ ++ LS
Sbjct: 784 SVGTTHILALTEDQFVYGWGRNDYGQIDPTLGPIISEPTLCPTLS 828
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+ F D +T IA D H LALTQ+G V+SWGNG G+LG+ T + EP+
Sbjct: 555 QYPQRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGH--GDTISYDEPK 612
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I AL ++ I+ G +SAA + +G LY WG N G++G G D V M+ +
Sbjct: 613 LIEALLEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLG-HGNFDDV------MTPTL 665
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
+ VV VACGS + LC S W + + +G G + S + + + +
Sbjct: 666 VTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPK--IVDKL 723
Query: 196 KNCPIVKLFAEHWNSARLS 214
+ +VK+F SA L+
Sbjct: 724 LDINVVKVFCGSQFSAALT 742
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPR 75
+P + L IA G ++QEG +++ G G+ G+LG G D NM EP+
Sbjct: 3033 IKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGL---GDDNNMCEPK 3089
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
I LS + V + +GG H+ A TQDG +++WG G++G + L P +
Sbjct: 3090 AIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISL--DKPKLI-- 3145
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E S+ I+ D+ACGS H+ A+ + L+ G EY +L G ++Q
Sbjct: 3146 -EVLKSKRIR--DIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQT 3192
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
P + V+ +A G H LALTQ+G VFSWG G G+LG+ G +++ P+
Sbjct: 3088 PKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGH---GNCISLDKPKL 3144
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I L + I+ G HSAA +G LY WG G+ G G D + + +
Sbjct: 3145 IEVLKSKRIRDIACGSGHSAAIASNGELYTWGL---GEYGRLGHGDTITQTRPKLVQA-- 3199
Query: 137 FDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+VV VACGSR T+AL D ++ G ++ +L G
Sbjct: 3200 --LIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRG 3240
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ L + + DIACG H A+T G +++WG G G+LG+ S D + P+
Sbjct: 4121 YDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDS--DDQLRPKV 4178
Query: 77 IRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ AL V+ ++ +G + T D +++WG + G++G G V P+
Sbjct: 4179 VEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV----PLK-- 4232
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4233 --IDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4274
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 21/145 (14%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
+ P +D +L V + CG LALT+ G V++WG G +LG+ G D ++ +P
Sbjct: 3246 YTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGH---GNDHHVRKPTL 3302
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPM 131
+ L G ++ ++ G H A T G +YAWG N+ GQ G V K LV
Sbjct: 3303 VEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLV------- 3355
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLA 156
D ++ +V V+CGS H++A
Sbjct: 3356 -----HDLEDARVNRVSCGSSHSIA 3375
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P +D LD+ V + CG ALT G V++WG G +LG+ G++ ++ P+ I
Sbjct: 717 PKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGH---GSEEHVRYPKVIE 773
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+L V +S G H A T+D F+Y WG N+ GQ ++ L ++ +P +
Sbjct: 774 SLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQ--IDPTLGPIISEP---TLCPTLS 828
Query: 139 SQNIKVVDVACGSRHTLALC 158
S+ V+ +A G + A C
Sbjct: 829 SKT--VIGLASGPTQSFAWC 846
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + + V +ACG +ALT +G V+SWG+G G+LG G+D P +
Sbjct: 3194 PKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLG--RGGSDGCYTPLLV 3251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ LGV+Q+ G S A T+ G ++ WG + ++G G +D H +
Sbjct: 3252 DRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLG-HG------NDHHVRKPTLVE 3304
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K++ VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3305 GLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTSVN 3349
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + L +A G A+T +G ++S G G+ G+LG GTD+ M P +
Sbjct: 4017 LPAPCESLSALRPIQLAGGEQTLFAVTADGKIYSTGYGAAGRLGI--GGTDSVMIPTLLE 4074
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + V +S+GG H A + +G +Y+WG + G++G K V +D + ED
Sbjct: 4075 SIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNK---VSYDRPKL--IED 4129
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+++VD+ACG H+ A+ L+ G Y +L G
Sbjct: 4130 L--LGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHG 4168
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P +LS L +Q++ G A T DG +Y+
Sbjct: 3994 GAIYGWGHNHRGQLG-GLEGPKVKL-PAPCESLSALRPIQLAGGEQTLFAVTADGKIYST 4051
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ G++G+ G +++ + E IK V V+ G +H +AL + ++ G
Sbjct: 4052 GYGAAGRLGIGGTDSVMIP-----TLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWG 4106
Query: 168 WNEYNQLSMGCGVS 181
+ +L G VS
Sbjct: 4107 EGDDGKLGHGNKVS 4120
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
Q+ V+ WG + QLG G+ + P LS L + I+ G +Q+G LY
Sbjct: 3010 QQSAVYVWGLNDKDQLG-GLKGSKIKL-PVYSETLSKLKPIHIAGGSKTLFIVSQEGKLY 3067
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
A G G++G+ ++ +P + + F IK V V G +H LAL D ++
Sbjct: 3068 ACGEGTNGRLGLGDDNNMC--EPKAIPFLSQF---VIKKVAVHSGGKHALALTQDGKVFS 3122
Query: 166 CGWNEYNQLSMGCGVS 181
G E +L G +S
Sbjct: 3123 WGEGEDGKLGHGNCIS 3138
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 86/163 (52%), Gaps = 13/163 (7%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ ++ + V +A G HCLAL+ EG V+SWG G G+LG+ P+
Sbjct: 4334 VPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH--GNRLMYDRPKL 4391
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I L G +V I+ GG HSAA T G+LY WG G++G D + P + +D
Sbjct: 4392 IEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLT--PKLVEALQD 4449
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ KV+DVACGS TL + DD+++W G +Y +L G
Sbjct: 4450 Y-----KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4487
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P +++ L V + CG +ALT+ G +++WG G +LG+ GTD ++ PR++
Sbjct: 4494 IPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGH---GTDDHVRRPRKV 4550
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G ++ I+ G H A T G ++ WG N+ GQ+G +G + P +
Sbjct: 4551 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG-DGTTS-ALQRPRLV-----H 4603
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4604 ALQGKKITRVACGSAHTLA 4622
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 76/149 (51%), Gaps = 23/149 (15%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHS 95
G H LALTQ+G +FSWG G G+LG+ G +++ PR I +L + I+ G HS
Sbjct: 3349 GGKHALALTQDGKIFSWGEGEDGKLGH---GNSVSLDKPRLIESLKSKRIRDIACGSGHS 3405
Query: 96 AARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
AA T G LY WG G++G + K LV + Q +V+ VACG
Sbjct: 3406 AAITSSGELYTWGLGEYGRLGHGDTATQMKPKLV----------QSLVGQ--RVIQVACG 3453
Query: 151 SR--HTLALCDDNSLWGCGWNEYNQLSMG 177
SR T+AL D S++ G ++ +L G
Sbjct: 3454 SRDAQTMALTADGSVYSWGDGDFGKLGRG 3482
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 30 VVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+V +ACG L +T GIVFSWG+G+ G+LG G D + P+ + L + V +
Sbjct: 602 MVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLG--RGGCDGSKTPKIVDKLLDINVAK 659
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+ GG SAA T G +Y WG G ++G G + H +P E + +K ++
Sbjct: 660 VYCGGQFSAALTAYGEVYTWGKGEGYRLG-HGNEE---HIRYPKVI-EVLKPKKVK--EL 712
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
G+ H LAL +D ++G G N+Y Q+ G
Sbjct: 713 CVGNFHVLALTEDQLVYGWGRNDYGQIDPALGT 745
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ + T M+P+ +++
Sbjct: 3384 PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTAT--QMKPKLVQS 3441
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T DG +Y+WG + G++G G P+
Sbjct: 3442 LVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYT----PLL----I 3493
Query: 138 DSQN-IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D N + VV + CG++ +LAL +W G +Y +L G
Sbjct: 3494 DRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3534
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPR 75
+P + L IA G ++QEG +++ G G+ G+LG G D+N+ EP+
Sbjct: 3275 IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGL---GDDSNVCEPK 3331
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
I LS + V + +GG H+ A TQDG +++WG G++G + L P +
Sbjct: 3332 LIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSL--DKPRLI-- 3387
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E S+ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3388 -ESLKSKRIR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQM 3434
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + + V +ACG +ALT +G V+SWG+G G+LG G+D P I
Sbjct: 3436 PKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLG--RGGSDGCYTPLLI 3493
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+GLGVVQI G S A T+ G ++ WG + ++G G +D H +
Sbjct: 3494 DRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG-HG------NDHHVRKPTLVE 3546
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ KVV VA G+ H LA+ D ++ G N++ Q G +
Sbjct: 3547 GLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTI 3589
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
+ P +D L V I CG LALT+ G V++WG G +LG+ G D ++ +P
Sbjct: 3488 YTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH---GNDHHVRKPTL 3544
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G VV ++ G H A T G +YAWG N+ GQ +G +V+ + D
Sbjct: 3545 VEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQ---QGNGSTIVNKKPSLVHELD 3601
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ +V V+CGS H++A
Sbjct: 3602 ----DARVNRVSCGSSHSIA 3617
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P +D LD+ V + CG ALT G V++WG G +LG+ G + ++ P+ I
Sbjct: 646 PKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGH---GNEEHIRYPKVIE 702
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L V ++ G +H A T+D +Y WG N+ GQ ++ L +V +P +
Sbjct: 703 VLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ--IDPALGTIVPEP---TLCPTLS 757
Query: 139 SQNIKVVDVACGSRHTLALC 158
+NI + +ACG + A C
Sbjct: 758 GKNI--IGLACGLTQSFAWC 775
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
++ P ++ L + DIACG H A+T G +++WG G G+LG+ S + + P+
Sbjct: 4385 MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDS--EDQLTPK 4442
Query: 76 EIRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+ AL V+ ++ +G + T D +++WG + G++G G + PM
Sbjct: 4443 LVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI----PMKI 4498
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V+ V CGS+ ++AL +++ G +Y++L G
Sbjct: 4499 E---SLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4539
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDA-NMEP 74
P R+ F + VT IA D H LALTQ+ V+SWGNG G+LG+ G EP
Sbjct: 484 QYPQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGH---GDRVWYDEP 540
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ + AL + I+ G +SA + +G LY WG N G++G G D V+ + +
Sbjct: 541 KLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLG-HGNSDNVLIPTLVTALN 599
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
VV VACGS + LC S W + N +G G
Sbjct: 600 GHM------VVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG 638
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + L + G LA+T +G V++ G G+ G+LG GTD+ M P +
Sbjct: 4282 LPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGI--GGTDSVMVPTLLE 4339
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + V V +++GG H A + +G +Y+WG + G++G +L ++D P E
Sbjct: 4340 SIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRL---MYD-RPKLIEEL 4395
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
++ +VD+ACG H+ A+ L+ G Y +L G Q++
Sbjct: 4396 LGTE---IVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLT 4440
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P +LS L VQ++ G A T DG +YA
Sbjct: 4259 GAIYGWGHNHRGQLG-GLEGAKVKL-PVLCESLSALRPVQLTGGEQTLLAVTADGKVYAT 4316
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ G++G+ G ++V + E +K V V G +H LAL + ++ G
Sbjct: 4317 GYGAAGRLGIGGTDSVMVP-----TLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWG 4371
Query: 168 WNEYNQLSMG 177
+ +L G
Sbjct: 4372 EGDDGKLGHG 4381
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
Q V+ WG + QLG G+ + P LS L + I+ G +Q+G LY
Sbjct: 3252 QHSAVYVWGLNDKDQLG-GLKGSKIKL-PVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLY 3309
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
A G G++G+ D V +P + + + IK V V G +H LAL D ++
Sbjct: 3310 ACGEGTNGRLGLGD--DSNVCEPKLIPFLSQY---MIKKVAVHSGGKHALALTQDGKIFS 3364
Query: 166 CGWNEYNQLSMGCGVS 181
G E +L G VS
Sbjct: 3365 WGEGEDGKLGHGNSVS 3380
>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Oreochromis niloticus]
Length = 536
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 94/185 (50%), Gaps = 17/185 (9%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRA-LSG 82
+ L VT++ACG H +ALT +G V++WG + GQ+G SG+ AN PR + + L
Sbjct: 133 NLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQVG---SGSTANQPTPRRVSSCLQN 189
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
VV I+ G S A +G +Y WG+N GQ+G+ ++ + + Q +
Sbjct: 190 KVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLG-------NNGNQQTPCRIAALQGV 242
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVK 202
+V VACG HTLAL D+ ++ G N Y QL G +Q L P + IV+
Sbjct: 243 NIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQA-----LPTPINTDKERIVE 297
Query: 203 LFAEH 207
+ A H
Sbjct: 298 VAACH 302
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T +G V++WG+ QLG + T+ + P +
Sbjct: 74 PRRIDVLCGKKIVSLSYGTGPHVVIATADGEVYAWGHNGYSQLG--NGTTNHGLTPALVS 131
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L V +++ G H+ A T DG +YAWG+NN GQVG + P P S
Sbjct: 132 TNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGS----TANQPTPRRVSSCL 187
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ D+ ++G G+N QL +G
Sbjct: 188 --QNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLG 225
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 12/139 (8%)
Query: 20 PSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ L + VV +IACG +A+ G ++ WG GQLG ++G P I
Sbjct: 180 PRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGN--QQTPCRIA 237
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ +VQ++ G H+ A T +GF+YAWG N+ GQ+G K + + P P++ ++
Sbjct: 238 ALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQAL--PTPINTDKE-- 293
Query: 139 SQNIKVVDV-ACGSRHTLA 156
++V+V AC + HT A
Sbjct: 294 ----RIVEVAACHTSHTSA 308
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L +T VF+ G G LG + +EPR I L G
Sbjct: 26 ELRLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGL--GDLQSTIEPRRIDVLCGK 83
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+V +S G G H T DG +YAWG N Q+G G + H P S + S+
Sbjct: 84 KIVSLSYGTGPHVVIATADGEVYAWGHNGYSQLG-NGTTN---HGLTPALVSTNLLSK-- 137
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V +VACGS HT+AL D ++ G+N Q+ G +Q P V +C
Sbjct: 138 RVTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQ-------PTPRRVSSC 186
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P R+ + + +ACG+ H LALT EG V++WG S GQLG + A P
Sbjct: 231 QTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALPTPINT 290
Query: 78 RALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVG 116
+V+++A SAA+TQ G + WG G V
Sbjct: 291 DKER---IVEVAACHTSHTSAAKTQSGQVLMWGQCRGQAVA 328
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
L + P D V ++ACG +H + L ++G V++ G ++GQLG+ G
Sbjct: 18 LQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN---- 73
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P +I AL+ ++ ++ G HS A + G L++WG + GQ+G+ D V P +
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI- 131
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + Q I + V+CG+ H LAL D + G N + QL +G
Sbjct: 132 --QKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + V I+CG +H LT+ G VF++G GS GQLG+ S + N PR +
Sbjct: 233 PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLE 290
Query: 80 LSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
L G V QI+ G H+ A G +YA+G GQ+G ++ P W+
Sbjct: 291 LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWA 346
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+ WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N GQ+G E + + P + D ++ VACG H+LAL D L+ G
Sbjct: 61 NTKGQLGHEREGN----KPEQIGALAD-----QHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 170 EYNQLSM 176
QL +
Sbjct: 112 SDGQLGL 118
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 86/163 (52%), Gaps = 13/163 (7%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ ++ + V +A G HCLAL+ EG V+SWG G G+LG+ P+
Sbjct: 4367 VPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH--GNRLMYDRPKL 4424
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I L G +V I+ GG HSAA T G+LY WG G++G D + P + +D
Sbjct: 4425 IEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLT--PKLVEALQD 4482
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ KV+DVACGS TL + DD+++W G +Y +L G
Sbjct: 4483 Y-----KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4520
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P +++ L V + CG +ALT+ G +++WG G +LG+ GTD ++ PR++
Sbjct: 4527 IPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGH---GTDDHVRRPRKV 4583
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G ++ I+ G H A T G ++ WG N+ GQ+G +G + P +
Sbjct: 4584 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG-DGTTS-ALQRPRLV-----H 4636
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4637 ALQGKKITRVACGSAHTLA 4655
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 76/149 (51%), Gaps = 23/149 (15%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHS 95
G H LALTQ+G +FSWG G G+LG+ G +++ PR I +L + I+ G HS
Sbjct: 3354 GGKHALALTQDGKIFSWGEGEDGKLGH---GNSVSLDKPRLIESLKSKRIRDIACGSGHS 3410
Query: 96 AARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
AA T G LY WG G++G + K LV + Q +V+ VACG
Sbjct: 3411 AAITSSGELYTWGLGEYGRLGHGDTATQMKPKLV----------QSLVGQ--RVIQVACG 3458
Query: 151 SR--HTLALCDDNSLWGCGWNEYNQLSMG 177
SR T+AL D S++ G ++ +L G
Sbjct: 3459 SRDAQTMALTADGSVYSWGDGDFGKLGRG 3487
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 11/153 (7%)
Query: 30 VVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+V +ACG L +T GIVFSWG+G+ G+LG G D + P+ + L + V +
Sbjct: 610 MVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLG--RGGCDGSKTPKIVDKLLDINVAK 667
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+ GG SAA T G +Y WG G ++G G + H +P E ++ +K ++
Sbjct: 668 VYCGGQFSAALTAYGEVYTWGKGEGYRLG-HGNEE---HIRYPKVI-EVLXTKKVK--EL 720
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
G+ H LAL +D ++G G N+Y Q+ G
Sbjct: 721 CVGNFHVLALTEDQLVYGWGRNDYGQIDPALGT 753
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ + T M+P+ +++
Sbjct: 3389 PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTAT--QMKPKLVQS 3446
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T DG +Y+WG + G++G G P+
Sbjct: 3447 LVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYT----PLL----I 3498
Query: 138 DSQN-IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D N + VV + CG++ +LAL +W G +Y +L G
Sbjct: 3499 DRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3539
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPR 75
+P + L IA G ++QEG +++ G G+ G+LG G D+N+ EP+
Sbjct: 3280 IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGL---GDDSNVCEPK 3336
Query: 76 EIRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
I LS + +++ +GG H+ A TQDG +++WG G++G + L P +
Sbjct: 3337 LIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSL--DKPRLI-- 3392
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E S+ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3393 -ESLKSKRIR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQM 3439
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + + V +ACG +ALT +G V+SWG+G G+LG G+D P I
Sbjct: 3441 PKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLG--RGGSDGCYTPLLI 3498
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+GLGVVQI G S A T+ G ++ WG + ++G G +D H +
Sbjct: 3499 DRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG-HG------NDHHVRKPTLVE 3551
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ KVV VA G+ H LA+ D ++ G N++ Q G +
Sbjct: 3552 GLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTI 3594
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P +D LD+ V + CG ALT G V++WG G +LG+ G + ++ P+ I
Sbjct: 654 PKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGH---GNEEHIRYPKVIE 710
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L V ++ G +H A T+D +Y WG N+ GQ ++ L VV +P +
Sbjct: 711 VLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ--IDPALGTVVPEP---TLCPTLS 765
Query: 139 SQNIKVVDVACGSRHTLALC 158
+NI + +ACG + A C
Sbjct: 766 GKNI--IGLACGLTQSFAWC 783
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
+ P +D L V I CG LALT+ G V++WG G +LG+ G D ++ +P
Sbjct: 3493 YTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH---GNDHHVRKPTL 3549
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G VV ++ G H A T G +YAWG N+ GQ +G +V+ + D
Sbjct: 3550 VEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQ---QGNGSTIVNKKPSLVHELD 3606
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ +V V+CGS H++A
Sbjct: 3607 ----DARVNRVSCGSSHSIA 3622
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
++ P ++ L + DIACG H A+T G +++WG G G+LG+ S + + P+
Sbjct: 4418 MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDS--EDQLTPK 4475
Query: 76 EIRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+ AL V+ ++ +G + T D +++WG + G++G G + PM
Sbjct: 4476 LVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI----PMKI 4531
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V+ V CGS+ ++AL +++ G +Y++L G
Sbjct: 4532 E---SLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4572
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDA-NMEP 74
P R+ F + VT IA D H LALTQ+ V+SWGNG G+LG+ G EP
Sbjct: 492 QYPQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGH---GDRVWYDEP 548
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ + AL + I+ G +SA + +G LY WG N G++G G D V+ + +
Sbjct: 549 KLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLG-HGNSDNVLIPTLVTALN 607
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
VV VACGS + LC S W + N +G G
Sbjct: 608 GHM------VVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG 646
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + L + G LA+T +G V++ G G+ G+LG GTD+ M P +
Sbjct: 4315 LPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGI--GGTDSVMVPTLLE 4372
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + V V +++GG H A + +G +Y+WG + G++G +L ++D P E
Sbjct: 4373 SIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRL---MYD-RPKLIEEL 4428
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
++ +VD+ACG H+ A+ L+ G Y +L G Q++
Sbjct: 4429 LGTE---IVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLT 4473
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P +LS L VQ++ G A T DG +YA
Sbjct: 4292 GAIYGWGHNHRGQLG-GLEGAKVKL-PVLCESLSALRPVQLTGGEQTLLAVTADGKVYAT 4349
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ G++G+ G ++V + E +K V V G +H LAL + ++ G
Sbjct: 4350 GYGAAGRLGIGGTDSVMVP-----TLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWG 4404
Query: 168 WNEYNQLSMG 177
+ +L G
Sbjct: 4405 EGDDGKLGHG 4414
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
Q V+ WG + QLG G+ + P LS L + I+ G +Q+G LY
Sbjct: 3257 QHSAVYVWGLNDKDQLG-GLKGSKIKL-PVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLY 3314
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
A G G++G+ D V +P + + + IK + V G +H LAL D ++
Sbjct: 3315 ACGEGTNGRLGLGD--DSNVCEPKLIPFLSQY---MIKKMAVHSGGKHALALTQDGKIFS 3369
Query: 166 CGWNEYNQLSMGCGVS 181
G E +L G VS
Sbjct: 3370 WGEGEDGKLGHGNSVS 3385
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
VT++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L VV I
Sbjct: 130 VTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P S Q I+V VA
Sbjct: 187 ACGQMCSMAVVNTGEVYVWGYNGNGQLG----LGSSGNQPTPCRISA---LQGIRVQRVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 240 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC----GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+D L IAC H + T EG VF+WG+ + QLG + T+ + P
Sbjct: 65 PRRLD---SLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLMPC 119
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I LS V +++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 120 HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVT 175
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ + ++ G+N QL +G
Sbjct: 176 GCL--QNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLG 216
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG P I
Sbjct: 170 IPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPT--PCRI 227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 228 SALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PAPVVVEKD- 284
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC HT A
Sbjct: 285 -----RIIEIAACHLAHTSA 299
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 224 PCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPAPVV 280
Query: 80 LSGLGVVQISAG--GWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 281 VEKDRIIEIAACHLAHTSAAKTQGGHVYMWGQCRGQSV 318
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ +G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + V G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q+ AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 182 QRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 238
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 239 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGN----KPEQIGALADQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGRNSHGQLGLG 172
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + + G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G + EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + + P + D Q+I V VACG H+LAL D L+ G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--VHVACGESHSLALSDQGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSV 185
QL + V+V
Sbjct: 115 QLGLMTTEDSVAV 127
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 30/167 (17%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G +S
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG--------------LSDE 227
Query: 135 EDFDS-------QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
ED +S + KVV ++CG HT L ++ G QL
Sbjct: 228 EDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGN----KPEQIGALADQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S + P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQV--GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+ G EG + P + D Q+I V VACG H+LAL D L WG G
Sbjct: 64 GQLGHGREG------NKPEQIGALAD---QHI--VHVACGESHSLALSDRGQLFSWGAG 111
>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1055
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 8/140 (5%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + D + + CG HC+AL+++G +F+WG + GQLG G + + P+ +
Sbjct: 125 RIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGL-GKGEPSKLFPQPL 183
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
++L+G+ + +I+AGG HS A + G ++ WG N GQ+G+ D V P + +
Sbjct: 184 KSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAV--PCHIKF---L 238
Query: 138 DSQNIKVVDVACGSRHTLAL 157
SQ KVV ++CG HT AL
Sbjct: 239 RSQ--KVVHISCGDEHTAAL 256
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T ++CG H +A+ ++G VF+WG G GQLG ++ + PR I+ L + Q+
Sbjct: 85 ITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVRI-PRLIKRLCDHRIAQVMC 143
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H A ++DG L+ WG N GQ+G+ GK + P P+ I + + G
Sbjct: 144 GNQHCIALSKDGQLFTWGQNTSGQLGL-GKGEPSKLFPQPLK-----SLAGIPLAKITAG 197
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
H+ AL +++G G N+ QL + + R +VP H+K
Sbjct: 198 GDHSFALSLSGAVFGWGKNKAGQLGLN------DIQDR-AVPCHIK 236
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ + CG H + L +G V++ G+ GQLG+ GT P + AL + +S
Sbjct: 35 LKEAVCGGQHSVFLLHDGSVYTCGSNGCGQLGHNKPGTS----PELVGALDTQRITLVSC 90
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A + G ++AWG +GGQ+G+ G + V P + D ++ V CG
Sbjct: 91 GQAHSMAVNEQGQVFAWGAGDGGQLGL-GTTEAAVRIPRLIKRLCDH-----RIAQVMCG 144
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
++H +AL D L+ G N QL +G G
Sbjct: 145 NQHCIALSKDGQLFTWGQNTSGQLGLGKG 173
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 19/125 (15%)
Query: 44 LTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART-QDG 102
L Q+G +F++G+GS GQLG+ S+ + + PR + L G V QI+ G H+ A G
Sbjct: 298 LFQDGGLFTFGDGSWGQLGHGSTSNE--LLPRRVLELMGTEVSQITCGRHHTLAFAPSSG 355
Query: 103 FLYAWGWNNGGQVGV----------EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
+YA+G N+ GQ+G K++L+ + H DS+ V + CG
Sbjct: 356 VVYAFGGNSHGQLGTGELSAEKCLYPVKINLLSGNNHRT------DSKKYSVTKITCGGD 409
Query: 153 HTLAL 157
H+ L
Sbjct: 410 HSFLL 414
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG GQLG ++ EPR SG G+ + GG HS DG +Y G N
Sbjct: 4 WGKAKDGQLGIEVE-RNSMFEPRNCNVFSGRGLKEAVCGGQHSVFLLHDGSVYTCGSNGC 62
Query: 113 GQVGVEGKLDLVVHDPHPMSWSE---DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G H+ P + E D+Q I + V+CG H++A+ + ++ G
Sbjct: 63 GQLG---------HN-KPGTSPELVGALDTQRITL--VSCGQAHSMAVNEQGQVFAWGAG 110
Query: 170 EYNQLSMGCGVSQVSV 185
+ QL +G + V +
Sbjct: 111 DGGQLGLGTTEAAVRI 126
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALT-QEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + V+ I CG H LA G+V+++G S GQLG + + P +I
Sbjct: 325 LPRRVLELMGTEVSQITCGRHHTLAFAPSSGVVYAFGGNSHGQLGTGELSAEKCLYPVKI 384
Query: 78 RALSG---------LGVVQISAGGWHS 95
LSG V +I+ GG HS
Sbjct: 385 NLLSGNNHRTDSKKYSVTKITCGGDHS 411
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 95/182 (52%), Gaps = 20/182 (10%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ S S D PR
Sbjct: 4032 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCD---RPRV 4088
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4089 VESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEV--- 4143
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVSVMTRL 189
Q +VVDVACGS TL L DD+++W G +Y +L S GC V ++ +T L
Sbjct: 4144 --LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGL 4201
Query: 190 SV 191
V
Sbjct: 4202 GV 4203
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +++ L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4190 KVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4247
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4248 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4301
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4302 -LQGKKVNRVACGSAHTLA 4319
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G VFSWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2983 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PR 3040
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3041 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3096
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3097 -EALRAKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3143
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3029 LGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3088
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3089 NCD---KPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3136
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3137 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3196
Query: 179 GVSQ 182
+ Q
Sbjct: 3197 NIPQ 3200
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3145 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3202
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3203 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3255
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3256 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3300
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4149 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIESLTGLGVVKV 4206
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4207 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4259
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4260 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4288
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3093 PRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3150
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3151 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3205
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3206 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3246
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3197 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3253
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3254 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3308
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3309 LEGQ--KITRVACGSSHSVA 3326
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ PR +
Sbjct: 649 PKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPRLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 706 GLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 79/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + Q+++VV V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIE-----KLQDLEVVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQ 688
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ +
Sbjct: 4086 PRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEV 4143
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV ++ +G + T D +++WG + G++G G V PM
Sbjct: 4144 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMKIE--- 4196
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4197 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4236
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +++WG +GG++G + L P S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3956 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4013
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E I+ V V G +H LAL + ++ G
Sbjct: 4014 GYGAGGRLGIGGTES--VSAP---TLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWG 4068
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4069 EAEDGKLGHG----SRSPCDRPRVVESLRGIEVVDVAAGGAHSA 4108
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 86/171 (50%), Gaps = 19/171 (11%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 3249 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 3306
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDP 128
PR I +L G+ VV ++AGG HSA T G LY WG G++G E +L + D
Sbjct: 3307 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDA 3366
Query: 129 HPMSWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVDVACGS TL L DD+++W G +Y +L G
Sbjct: 3367 L----------QGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3407
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 10/139 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 3413 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 3470
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG Y WG N+ GQ+G +G + + P ++
Sbjct: 3471 QGLQGKKVIAIATGSLHCVCCTEDGS-YTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 3523
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 3524 -LQGKKVNRVACGSAHTLA 3541
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2205 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 2262
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 2263 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 2318
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 2319 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 2365
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 2251 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 2310
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 2311 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 2358
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 2359 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 2418
Query: 179 GVSQ 182
+ Q
Sbjct: 2419 NIPQ 2422
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 2367 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 2424
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 2425 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 2477
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 2478 GLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 2522
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 2315 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 2372
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 2373 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 2427
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 2428 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2468
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 2419 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 2475
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 2476 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 2530
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 2531 LEGQ--KITRVACGSSHSVA 2548
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +D V D+ACG L LT + V+SWG+G G+LG G+D P +I
Sbjct: 3361 PKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKI 3418
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+GLGVV++ G S A T+ G +Y WG + ++G G D H +
Sbjct: 3419 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQ 3471
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
Q KV+ +A GS H + +D S W + ++ +G G + RL
Sbjct: 3472 GLQGKKVIAIATGSLHCVCCTEDGSY---TWGDNDEGQLGDGTTNAIQRPRL 3520
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 3309 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVDA 3366
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV ++ +G + T D +++WG + G++G G V PM
Sbjct: 3367 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 3418
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 3419 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3459
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3179 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 3236
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 3237 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 3291
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 3292 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 3331
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 90/164 (54%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ ++ + + +A G HC+AL+ EG V+SWG G G+LG+ G + + P+
Sbjct: 2 IPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGH---GNKVSYDRPK 58
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I L G+ +V I+ GG HSAA T G+LY WG G++G D + P + +
Sbjct: 59 LIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQ 116
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
D+ KV+DVACGS TL + DD+++W G +Y +L G
Sbjct: 117 DY-----KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 155
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ GTD ++ PR++
Sbjct: 162 VPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGH---GTDDHVRRPRKV 218
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G ++ I+ G H A + G ++ WG N+ GQ+G +G +H P +
Sbjct: 219 AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG-DGTTS-ALHRPRLVHA---- 272
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 273 -LQGKKITRVACGSAHTLA 290
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ L + + DIACG H A+T G +++WG G G+LG+ S D + P+
Sbjct: 54 YDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDS--DDQLRPKV 111
Query: 77 IRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ AL V+ ++ +G + T D +++WG + G++G G V P+
Sbjct: 112 VEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV----PLK-- 165
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 166 --IDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 207
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 86/163 (52%), Gaps = 15/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ S S D PR
Sbjct: 3968 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCD---RPRV 4024
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4025 IESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEA--- 4079
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 4080 --LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4120
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4126 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4183
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4184 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4237
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4238 -LQGKKVNRVACGSAHTLA 4255
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2920 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 2977
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 2978 QITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3033
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3034 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3080
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3082 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNVPQNI 3139
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3140 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3192
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3193 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3237
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ +V +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 2966 LGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3025
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3026 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3073
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3074 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3133
Query: 179 GVSQ 182
V Q
Sbjct: 3134 NVPQ 3137
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4085 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4142
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4143 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4195
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4196 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4224
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 35 ACG--FDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGG 92
+CG F LA + G V+SWG+G G+LG G+D P+ I L L VV++ G
Sbjct: 540 SCGIRFAQTLAFYENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVVKVRCGS 597
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
S A T+DG +Y+WG + ++G G + H +P Q KV+DVA GS
Sbjct: 598 QFSIALTKDGQVYSWGKGDNQRLG-HGTEE---HVRYPKLLE---GLQGKKVIDVAAGST 650
Query: 153 HTLALCDDNSLWGCGWNEYNQ 173
H LAL +D+ + G N+ Q
Sbjct: 651 HCLALTEDSEVHSWGSNDQCQ 671
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3030 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3087
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G V P + E
Sbjct: 3088 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNV--PQNI---ERL 3142
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3143 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3183
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3134 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3190
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3191 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3245
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3246 LEGQ--KITRVACGSSHSVA 3263
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 579 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 635
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 636 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 689
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 690 DTKHI--VGIACGPAQSFA 706
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4022 PRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4079
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4080 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4131
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4132 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4172
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 69/146 (47%), Gaps = 19/146 (13%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 437 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 494
Query: 96 AARTQDGFLYAWGWNNGGQV--GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR- 152
AA T +G LY WG N ++ G ++++ D Q K + +CG R
Sbjct: 495 AAITAEGELYTWGRGNYXRLDHGRSAMNEILI-------MISGLDRQ--KFIYKSCGIRF 545
Query: 153 -HTLALCDDNSLWGCGWNEYNQLSMG 177
TLA ++ +W G +Y +L G
Sbjct: 546 AQTLAFYENGQVWSWGDGDYGKLGRG 571
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 373 PIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYNSD------------TLAPQLVQG 420
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 421 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 476
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 477 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHG 517
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3892 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3949
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 3950 GYGAGGRLGIGGTES--VSSP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4004
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4005 EAEDGKLGHG----SRSPCDRPRVIESLRGVEVVDVAAGGAHSA 4044
>gi|427797227|gb|JAA64065.1| Putative alpha-tubulin suppressor, partial [Rhipicephalus
pulchellus]
Length = 606
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 15/192 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+PS + L V +ACG H LALT G V++WG + GQ+G S T PR++
Sbjct: 193 VPSSISAGLSHRVAQVACGSHHSLALTTNGDVYAWGQNNCGQVG--SGSTTNQPTPRKVS 250
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ + G + ++ G S A ++G ++ WG+N GQ+G+ V+ P +
Sbjct: 251 SGIGGRRCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNN----VNQTSPCRVT--- 303
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
+ Q + + V CG HT+AL D+ L+ G N Y QL G +QVS +P +
Sbjct: 304 NLQGVVIHKVVCGYAHTMALSDEGVLYTWGANSYGQLGTGNKANQVS---PFKMPTDIGR 360
Query: 198 CPIVKLFAEHWN 209
IV++ A H+N
Sbjct: 361 --IVEIAASHYN 370
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 9/166 (5%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P ++D + +A G H LA+T+ G + SWG+ QLG ++ + P I
Sbjct: 141 PRKVDALCRKGIHALAYGSGPHVLAVTESGELLSWGHNGYCQLG--NNCNTQGLVPSSIS 198
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
A V Q++ G HS A T +G +YAWG NN GQVG + P P S
Sbjct: 199 AGLSHRVAQVACGSHHSLALTTNGDVYAWGQNNCGQVGSGS----TTNQPTPRKVSSGIG 254
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ + + VACG ++A+ ++ ++G G+N QL +G V+Q S
Sbjct: 255 GR--RCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTS 298
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 34 IACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+AC F + L +TQ+ VF+ G+ S G LG T ++EPR++ AL G+ ++
Sbjct: 99 LACVFGSSGNEALMVTQDDDVFALGSNSSGCLGL--GDTHGSLEPRKVDALCRKGIHALA 156
Query: 90 AG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G G H A T+ G L +WG N Q+G +V P S S +V VA
Sbjct: 157 YGSGPHVLAVTESGELLSWGHNGYCQLGNNCNTQGLV----PSSISAGLSH---RVAQVA 209
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
CGS H+LAL + ++ G N Q+ G +Q
Sbjct: 210 CGSHHSLALTTNGDVYAWGQNNCGQVGSGSTTNQ 243
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + +V+ + CG+ H +AL+ EG++++WG S GQLG +G AN + +
Sbjct: 299 PCRVTNLQGVVIHKVVCGYAHTMALSDEGVLYTWGANSYGQLG---TGNKAN-QVSPFKM 354
Query: 80 LSGLG-VVQISAGGWH--SAARTQDGFLYAWGWNNGGQVGV 117
+ +G +V+I+A ++ SA TQ +Y WG G V V
Sbjct: 355 PTDIGRIVEIAASHYNHISAVMTQTSRVYMWGQCRGQSVTV 395
>gi|340502171|gb|EGR28884.1| hypothetical protein IMG5_167380 [Ichthyophthirius multifiliis]
Length = 267
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 92/164 (56%), Gaps = 15/164 (9%)
Query: 20 PSRMDHF--LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
P ++ F +++VT IA G H A T +G +++WG G GQLG+ G++ N E P++
Sbjct: 102 PKIIETFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNGQLGH---GSNQNEEIPKK 158
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSE 135
++ + V++I+ G H+ A +Y WG+N GQ+G + DL V+ P + +
Sbjct: 159 VKEFQDIRVLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQ---DLSRVNLPKKIMF-- 213
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
F+ + +VV + CG +H++AL + ++ G NEY QL + G
Sbjct: 214 -FNQK--EVVQIQCGKKHSIALTVEGQVYSWGSNEYGQLGIQLG 254
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 27/164 (16%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS--GLGVVQISAGGWHSA 96
++ +++ +G VFSWG+G G+LGY P+ I S + V +I+ G HSA
Sbjct: 68 NYSMSIDTKGNVFSWGSGEFGRLGYEKD-VKYQKYPKIIETFSIQNIIVTKIALGTHHSA 126
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF-----DSQNIKVVDVACGS 151
A T G LY WG GQ+G H + +E+ + Q+I+V+++ACG
Sbjct: 127 ACTNQGKLYTWGQGVNGQLG------------HGSNQNEEIPKKVKEFQDIRVLEIACGD 174
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
HT+A+ N ++G G+N+ QL ++R+++P+ +
Sbjct: 175 SHTMAIISGNLVYGWGFNQAGQLGF-------QDLSRVNLPKKI 211
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++ F D+ V +IACG H +A+ +V+ WG GQLG+ + N+ P++I
Sbjct: 154 EIPKKVKEFQDIRVLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQDL-SRVNL-PKKI 211
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
+ VVQI G HS A T +G +Y+WG N GQ+G++
Sbjct: 212 MFFNQKEVVQIQCGKKHSIALTVEGQVYSWGSNEYGQLGIQ 252
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
LS+V ++P ++ F V I CG H +ALT EG V+SWG+ GQLG
Sbjct: 202 LSRV-NLPKKIMFFNQKEVVQIQCGKKHSIALTVEGQVYSWGSNEYGQLG 250
>gi|293344154|ref|XP_001066157.2| PREDICTED: RCC1 domain-containing protein 1-like [Rattus
norvegicus]
Length = 330
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 78/176 (44%), Gaps = 38/176 (21%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+L V + G +H L L + G VFSWG G GQLG+ S +A +EPR + AL GL + +
Sbjct: 160 ELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGS--LEAELEPRLLEALQGLRMAE 217
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQV------GVEGKL-------------------- 121
++AGGWHS ++ G +Y WGWN GQ+ G E K
Sbjct: 218 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELNDDGLRGEEAAL 277
Query: 122 -------DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
+ P P S +K +CGSRHT + L+ GW E
Sbjct: 278 ADVGAPAHFIAIQPFPALLDLPLGSDAVK---ASCGSRHTAVVTRTGELYTWGWGE 330
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L + +P + D+ + +ACG+ H AL++ G VFSWG GQLG G+
Sbjct: 118 LNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSS 177
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ P+ I++L G+ Q+SAGG HS A T G ++ WG N GQ+G+ +D
Sbjct: 178 IST-PQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLND-----TNDRW 231
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + SQ +V+ V+CG HT AL + ++ G Y QL
Sbjct: 232 FPALLKSLRSQ--RVIYVSCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + F V D+ CG H + L +G V++ G GQLG+ +P + A
Sbjct: 25 PRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGH----EKPRKKPEHVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +++WG + GQ+G+ + V P + D
Sbjct: 81 LDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGL-NNFEECVRVPRNIKCLSD--- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
+++ VACG RH+ AL ++ G N++ QL +G S +S
Sbjct: 137 --VQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIST 180
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 7/147 (4%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
++ ++ G H LAL +G +FSWG GS GQLG ++ + PR I+ LS + + Q++
Sbjct: 85 IIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGL-NNFEECVRVPRNIKCLSDVQIAQVA 143
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G HS A ++ G +++WG N GQ+G+ G + P + Q I ++
Sbjct: 144 CGYRHSHALSKGGQVFSWGQNQFGQLGL-GMHGSSISTPQIIQ-----SLQGIPFAQLSA 197
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSM 176
G H+ A+ +++G G N++ QL +
Sbjct: 198 GGAHSFAITLSGAVFGWGRNKFGQLGL 224
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+ + V ++CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 232 FPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEIN--PRKVF 289
Query: 79 ALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVE 118
L G V QIS G H+ A T G +Y++G GQ+G
Sbjct: 290 ELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLGTR 330
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + ++ G H A+T G VF WG GQLG + T+ P +++
Sbjct: 181 PQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGL--NDTNDRWFPALLKS 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V+ +S G H+AA T++G ++ +G GQ+G H ++ + F+
Sbjct: 239 LRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-------NHEINPRKVFEL 291
Query: 140 QNIKVVDVACGSRHTLAL 157
V ++CG +HTLA
Sbjct: 292 MGNIVTQISCGRQHTLAF 309
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALT-QEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
P ++ + +VT I+CG H LA T G ++S+G G GQLG S+ + P
Sbjct: 285 PRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSPAP 340
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ ++ + + +A G HCLAL+ EG V+SWG G G+LG+ G + + P+
Sbjct: 4007 VPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH---GNRLSYDRPK 4063
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L G+ +V I+ GG HSAA T G+LY WG G++G G D + P + +
Sbjct: 4064 LVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLG-HGDSDDQLR-PKVVEALQ 4121
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
D+ KV+DVACGS TL + DD+++W G +Y +L G
Sbjct: 4122 DY-----KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4160
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 13/165 (7%)
Query: 30 VVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+V +ACG L +T GIVFSWG+G G+LG G+D + P+ + L + VV+
Sbjct: 614 MVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLG--RGGSDGSKTPKIVDKLLDINVVR 671
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+ GG SAA T G +Y WG + ++G G + H +P E + IK D+
Sbjct: 672 VFCGGQFSAALTARGEVYTWGKGDAYRLG-HGNEE---HVRYP-KLIESLRDKKIK--DL 724
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQL--SMGCGVSQVSVMTRLS 190
+ G H LAL +D ++G G N+Y Q+ ++G VS+ S+ LS
Sbjct: 725 SVGGTHILALTEDQFVYGWGRNDYGQIDPTLGPVVSEPSLCPTLS 769
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
+P ++D L V + CG +ALT+ G V++WG G +LG+ GTD ++ PR+
Sbjct: 4166 KVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGH---GTDDHVRRPRK 4222
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL G ++ I+ G H A + G ++ WG N+ GQ+G +G + P +
Sbjct: 4223 VAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG-DGTTS-ALQRPRLV----- 4275
Query: 137 FDSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4276 HALQGKKITRVACGSAHTLA 4295
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P RM F D VT IA D H LALTQ+G V+SWGNG G+LG+ ++ EP+
Sbjct: 496 QYPQRMHSFSDKPVTMIASHSDGKHYLALTQDGCVYSWGNGDGGRLGH--GDNISHDEPK 553
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I L ++ I+ G +SAA + G LY WG N G++G D+ V P ++ +
Sbjct: 554 LIETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTV--PTLVTTLK 611
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
VV VACGS + LC S W + + +G G S S + + + +
Sbjct: 612 GH-----MVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPK--IVDKL 664
Query: 196 KNCPIVKLFAEHWNSARLS 214
+ +V++F SA L+
Sbjct: 665 LDINVVRVFCGGQFSAALT 683
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 13/171 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPR 75
+P R + L IA G ++QEG +++ G G+ G+LG G D NM EP+
Sbjct: 2972 IKIPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGL---GDDYNMCEPK 3028
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
I LS + V + +GG H+ A TQDG +++WG G++G G + P +
Sbjct: 3029 LIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLG-HGNCT-TLDKPRLI-- 3084
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
E S+ I+ D+ACGS H+ A+ + L+ G EY +L G +Q+
Sbjct: 3085 -ESLKSKRIR--DIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTATQMK 3132
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+ G +++WG G G+LG+ + T M+P+ ++A
Sbjct: 3081 PRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTAT--QMKPKLVQA 3138
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LSG VVQ++ G + + T DG +Y WG + G++G G P+
Sbjct: 3139 LSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYT----PLL----V 3190
Query: 138 DSQN-IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D N + VV V CG++ +LAL +W G +Y +L G
Sbjct: 3191 DRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3231
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 80/167 (47%), Gaps = 23/167 (13%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + V+ +A G H LALTQ+G VFSWG G G+LG+ + T +PR I
Sbjct: 3027 PKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLD--KPRLI 3084
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMS 132
+L + I+ G HSAA +G LY WG G++G + K LV
Sbjct: 3085 ESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTATQMKPKLV-------- 3136
Query: 133 WSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+ Q +VV VACGSR T++L D ++ G ++ +L G
Sbjct: 3137 --QALSGQ--RVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRG 3179
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P +D LD+ V + CG ALT G V++WG G +LG+ G + ++ P+ I
Sbjct: 658 PKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGH---GNEEHVRYPKLIE 714
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+L + +S GG H A T+D F+Y WG N+ GQ ++ L VV +P S
Sbjct: 715 SLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQ--IDPTLGPVVSEP---SLCPTLS 769
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
S+N V+ +A G + A C S W G N
Sbjct: 770 SKN--VIGLASGPTQSFAWC--MSAWSGGANR 797
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ L + + DIACG H A+T G +++WG G G+LG+ S D + P+
Sbjct: 4059 YDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDS--DDQLRPKV 4116
Query: 77 IRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ AL V+ ++ +G + T D +++WG + G++G G V P+
Sbjct: 4117 VEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV----PLK-- 4170
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + V+ V CGS+ ++AL +++ G +Y++L G
Sbjct: 4171 --IDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4212
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG ++LT +G V++WG+G G+LG G+D P + L+GLGVVQ+
Sbjct: 3144 VVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLG--RGGSDGCYTPLLVDRLNGLGVVQV 3201
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G +D H + + K+V VA
Sbjct: 3202 ECGAQFSLALTKYGEVWTWGKGDYFRLG-HG------NDHHVRKPTLVEGLRGKKIVHVA 3254
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
G+ H LA+ D ++ G N++ Q G +
Sbjct: 3255 VGALHCLAVTDTGQVYAWGDNDHGQQGNGTTI 3286
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
+ P +D L V + CG LALT+ G V++WG G +LG+ G D ++ +P
Sbjct: 3185 YTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGH---GNDHHVRKPTL 3241
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G +V P S +
Sbjct: 3242 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTIVNRKP---SLVHE 3296
Query: 137 FDSQNIKVVDVACGSRHTLA 156
D + ++ V+CGS H++A
Sbjct: 3297 LD--DTRMNRVSCGSSHSIA 3314
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ + L +A G A+T +G V+S G G+ G+LG GTD+ M P
Sbjct: 3953 IKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGI--GGTDSVMVPTL 4010
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ ++ + + V +++GG H A + +G +Y+WG + G++G +L P +
Sbjct: 4011 LESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSY--DRPKLVE-- 4066
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D I++VD+ACG H+ A+ L+ G Y +L G
Sbjct: 4067 ---DLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHG 4106
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P +LS L +Q++ G A T DG +Y+
Sbjct: 3932 GAIYGWGHNHRGQLG-GLEGAKIKL-PAPCESLSALRPIQLAGGEQTLFAVTADGKVYST 3989
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ G++G+ G ++V + E IK V V G +H LAL + ++ G
Sbjct: 3990 GYGAAGRLGIGGTDSVMVP-----TLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWG 4044
Query: 168 WNEYNQLSMGCGVS 181
+ +L G +S
Sbjct: 4045 EGDDGKLGHGNRLS 4058
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Query: 43 ALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDG 102
A Q+ V+ WG + QLG G+ + P LS L + I+ G +Q+G
Sbjct: 2946 APPQQSAVYVWGLNDKDQLG-GLKGSKIKI-PVRSEVLSKLKPIHIAGGSKTLFIVSQEG 3003
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
LYA G G++G+ ++ +P + + + IK V V G +H LAL D
Sbjct: 3004 KLYACGEGTNGRLGLGDDYNMC--EPKLIPFLSQY---VIKKVAVHSGGKHALALTQDGK 3058
Query: 163 LWGCGWNEYNQLSMG 177
++ G E +L G
Sbjct: 3059 VFSWGEGEDGKLGHG 3073
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D V+ I+CG H LAL+ G V SWG+ GQLG+ + + P+ +R
Sbjct: 81 PQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQL-PKVVRQ 139
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VVQI+ G HS A T G LY+WG N GQ+GV DL H +P+ +
Sbjct: 140 LVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-THCNYPLRLTTLL-- 196
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + +ACG H+ + +++G G N QL +
Sbjct: 197 -GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 232
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 12/178 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDAN 71
++ +P + + V IACG +H LALT G ++SWG+ GQLG P+ T N
Sbjct: 128 KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCN 187
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P + L G+ + I+ GG HS ++ G ++ WG NN GQ+G+ + + +P
Sbjct: 188 Y-PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE----TNRAYPT 242
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ + V VACG ++ L ++ ++ CG Y QL G G S ++ R+
Sbjct: 243 QLK---TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL--GHGFSSNEMLPRM 295
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANMEPREIRALSGLGV 85
D V +ACG H L LT G V++ G+ QLG+ P+ P+ I L +
Sbjct: 39 DTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK------RPQLIPELQDYVI 92
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+QIS G HS A + G + +WG N+ GQ+G + + +V P + + VV
Sbjct: 93 IQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKE-IVQLPKVVR-----QLVSKTVV 146
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
+ACG+ H+LAL L+ G N Y QL GV+ + +T + P
Sbjct: 147 QIACGNNHSLALTSCGELYSWGSNIYGQL----GVNSPNDLTHCNYP 189
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 19/143 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L + + IACG +H +++ G VF WG + GQLG A P +++
Sbjct: 189 PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKT 246
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L LGV ++ G S T +G ++ G GQ+G H S +E
Sbjct: 247 LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG------------HGFSSNEMLPR 294
Query: 140 QNIK-----VVDVACGSRHTLAL 157
++ + VACG+RHTLAL
Sbjct: 295 MVMELMGSTITQVACGNRHTLAL 317
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ L V +ACG + + LT EG VF+ G G+ GQLG+ S + M PR +
Sbjct: 241 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE--MLPRMVME 298
Query: 80 LSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVV 125
L G + Q++ G H+ A G +YA+G + GQ+G L++
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLML 345
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ S GQLG + + PR+I V Q++ G H+ T G +YA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ Q+G DL P + +D+ ++ ++CGSRH+LAL D + G N
Sbjct: 67 NDYSQLG----HDLPTKRPQLIPELQDY-----VIIQISCGSRHSLALSDWGQVLSWGDN 117
Query: 170 EYNQL 174
+ QL
Sbjct: 118 DCGQL 122
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 85/156 (54%), Gaps = 11/156 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
PS + L VT IACG +H ALT +G VF+WG G GQLG+ G+ N++ P ++
Sbjct: 184 PSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGH---GSTQNIKLPVAVK 240
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL V+QI+ GG H+ A T DG L++WG GQ G K D+ +S +
Sbjct: 241 ALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDV-------LSPKQVHQ 293
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +V V+ G+RHT+ L D ++G G E QL
Sbjct: 294 LEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQL 329
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 11/171 (6%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G M QV +P R+ +VT IACGF H +A+T+ G + SWG GQLG+ S
Sbjct: 68 GVRGMEEQV--VPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGN 125
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
++PR ++ L +++AGG+H+ A T G +Y++G + G +G G LD
Sbjct: 126 IVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALG-HGNLDGCSTP 184
Query: 128 PHPMS-WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S W + V +ACG H+ AL D ++ G +Y QL G
Sbjct: 185 SLVKSLW-------GLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG 228
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
DL + +A G H LALT G V+S+G+GS G LG+ + D P +++L GLGV Q
Sbjct: 140 DLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGN--LDGCSTPSLVKSLWGLGVTQ 197
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
I+ G HSAA T DG ++ WG GQ+G ++ + P + D D V+ +
Sbjct: 198 IACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKL--PVAVKALVDHD-----VIQI 250
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
ACG HTLA+ D L+ G + Q G
Sbjct: 251 ACGGDHTLAITSDGRLFSWGHGLWGQTGHG 280
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q +P + +D V IACG DH LA+T +G +FSWG+G GQ G+ + + +
Sbjct: 230 TQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTK--EDVLS 287
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
P+++ L G +VQ+SAG H+ G +Y WG Q+G + D
Sbjct: 288 PKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLGTCDRCDF 337
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V++ G G GQLG + P + L G +V I+A +H+A T +G +Y G
Sbjct: 4 VYALGRGDLGQLGIGDY--SDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGS 61
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ GQ+GV G + VV P+ + D+ V +ACG +HT+A+ + +L G +
Sbjct: 62 NDAGQLGVRGMEEQVV----PIRVAA-LDTH--MVTHIACGFKHTVAVTETGALASWGGD 114
Query: 170 EYNQLSMGCG 179
EY QL G
Sbjct: 115 EYGQLGFDSG 124
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 7/158 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + + + IA H LT EG V++ G+ GQLG G + + P + A
Sbjct: 26 PTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQLGV--RGMEEQVVPIRVAA 83
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V I+ G H+ A T+ G L +WG + GQ+G + + P + S D
Sbjct: 84 LDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRD--- 140
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VA G HTLAL ++ G L G
Sbjct: 141 --LHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHG 176
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D V+ I+CG H LAL+ G V SWG+ GQLG+ + + P+ +R
Sbjct: 81 PQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQL-PKVVRQ 139
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VVQI+ G HS A T G LY+WG N GQ+GV DL H +P+ +
Sbjct: 140 LVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-THCNYPLRLTTLL-- 196
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + +ACG H+ + +++G G N QL +
Sbjct: 197 -GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 232
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDAN 71
++ +P + + V IACG +H LALT G ++SWG+ GQLG P+ T N
Sbjct: 128 KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCN 187
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P + L G+ + I+ GG HS ++ G ++ WG NN GQ+G+ + + +P
Sbjct: 188 Y-PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE----TNRAYPT 242
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ + V ACG ++ L ++ ++ CG Y QL G G S ++ R+
Sbjct: 243 QLK---TLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQL--GHGFSSNEMLPRM 295
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANMEPREIRALSGLGV 85
D V ++CG H L LT G V++ G+ QLG+ P+ P+ I L +
Sbjct: 39 DTAVQQVSCGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK------RPQLIPELQDYVI 92
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+QIS G HS A + G + +WG N+ GQ+G + + +V P + + VV
Sbjct: 93 IQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKE-IVQLPKVVR-----QLVSKTVV 146
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
+ACG+ H+LAL L+ G N Y QL GV+ + +T + P
Sbjct: 147 QIACGNNHSLALTSCGELYSWGSNIYGQL----GVNSPNDLTHCNYP 189
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L + + IACG +H +++ G VF WG + GQLG A P +++
Sbjct: 189 PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKT 246
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L LGV + G S T +G ++ G GQ+G H S +E
Sbjct: 247 LRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLG------------HGFSSNEMLPR 294
Query: 140 QNIK-----VVDVACGSRHTLAL 157
++ + VACG+RHTLA
Sbjct: 295 MVMELMGSTITQVACGNRHTLAF 317
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ S GQLG + + PR+I V Q+S G H+ T G +YA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGS 66
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ Q+G DL P + +D+ ++ ++CGSRH+LAL D + G N
Sbjct: 67 NDYSQLG----HDLPTKRPQLIPELQDY-----VIIQISCGSRHSLALSDWGQVLSWGDN 117
Query: 170 EYNQL 174
+ QL
Sbjct: 118 DCGQL 122
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ L V ACG + + LT EG VF+ G G+ GQLG+ S + M PR +
Sbjct: 241 PTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE--MLPRMVME 298
Query: 80 LSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVV 125
L G + Q++ G H+ A G +YA+G + GQ+G L++
Sbjct: 299 LMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLML 345
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4002 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4059
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4060 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4117
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVDVACGS TL L DD+++W G +Y +L G
Sbjct: 4118 EA-----LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4160
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4166 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4223
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4224 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4277
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4278 -LQGKKVNRVACGSAHTLA 4295
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2958 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3015
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3016 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3071
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3072 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3118
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 484 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 541
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 542 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 594
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 595 TLAVTENGQVWSWGDGDYGKLGRG 618
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3004 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3063
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3064 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3111
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3112 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3171
Query: 179 GVSQ 182
+ Q
Sbjct: 3172 NIPQ 3175
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3120 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3177
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3178 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3230
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3231 GLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 3275
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4125 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4182
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4183 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4235
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4236 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4264
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3068 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3125
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3126 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3180
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3181 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3172 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3228
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3229 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3283
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3284 LEGQ--KITRVACGSSHSVA 3301
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 626 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 682
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 683 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 736
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 737 DTKHI--VGIACGPAQSFA 753
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 531 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 588
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 589 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 641
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 642 CGSQFSIALTKDGQVYSWGKGDNQ 665
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4062 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4119
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV ++ +G + T D +++WG + G++G G V PM
Sbjct: 4120 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4171
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4172 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4212
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 467
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +++I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 468 LASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 523
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 524 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 564
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3932 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3989
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 3990 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4044
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4045 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4084
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4025 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4082
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4083 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4140
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVDVACGS TL L DD+++W G +Y +L G
Sbjct: 4141 EA-----LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4183
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4246
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4247 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4300
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4301 -LQGKKVNRVACGSAHTLA 4318
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2981 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3038
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3039 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3094
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3095 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3027 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3086
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3087 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3134
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3135 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194
Query: 179 GVSQ 182
+ Q
Sbjct: 3195 NIPQ 3198
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3200
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3253
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3254 GLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 3298
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4205
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4206 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4258
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4259 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4287
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3148
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3203
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3204 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3251
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3306
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3307 LEGQ--KITRVACGSSHSVA 3324
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQ 688
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4085 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4142
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV ++ +G + T D +++WG + G++G G V PM
Sbjct: 4143 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4194
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4195 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4235
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +++I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 491 LASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3955 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4013 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4067
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4068 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4107
>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
boliviensis]
Length = 1024
Score = 86.7 bits (213), Expect = 8e-15, Method: Composition-based stats.
Identities = 58/148 (39%), Positives = 78/148 (52%), Gaps = 16/148 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG +PS+ T P+ + LSG+ +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTT-----PQIVEHLSGIPLA 194
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QISAG HS A + G +Y+WG N GQ+G LD P S E D+Q KV
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLG----LDHTESKDSP-SLIEALDNQ--KVEF 247
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ACG HT L D L+ G ++ QL
Sbjct: 248 LACGGSHTALLTQDGLLFTFGAGKHGQL 275
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ + V +ACG H LTQ+G++F++G G GQLG+ S T + P +
Sbjct: 234 PSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNS--TQNELRPCLVAE 291
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G V QI+ G WH+ A D G ++++G GQ+G G D ++ P +S +ED
Sbjct: 292 LAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDL 350
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG T++ P I A
Sbjct: 182 PQIVEHLSGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGL--DHTESKDSPSLIEA 239
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG H+A TQDG L+ +G GQ+G + + P +E +
Sbjct: 240 LDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQN----ELRPCLVAELAGN 295
Query: 140 QNIKVVDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMG 177
+V +ACG HTLA D ++ G + QL G
Sbjct: 296 ---RVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNG 331
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q K++ + CG H+LAL L+ G N + QL +G + T + EH+ P
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG---RKFPSTTTPQIVEHLSGIP 192
Query: 200 IVKLFAEHWNSARLSV 215
+ ++ A +S LS+
Sbjct: 193 LAQISAGEAHSMALSM 208
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 8/161 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + ++CG+ H LAL++ VFSWG GQLG
Sbjct: 71 EECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGL-GFEFKKQTS 129
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ I++L G+ +QI+AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 130 PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL-- 185
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 186 -KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 223
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 21/153 (13%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
+ ++CG H LAL +G V++WG + GQLG P GT+ + PR I++LS + +VQ+S
Sbjct: 35 IVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLP--GTEECIRVPRNIKSLSDIQIVQVS 92
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK------ 143
G +HS A ++ +++WG N GQ+G+ + + Q IK
Sbjct: 93 CGYYHSLALSKGSEVFSWGQNKYGQLGLG------------FEFKKQTSPQLIKSLLGIP 140
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ +A G H+ L +++G G N++ QL +
Sbjct: 141 FMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 173
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 180 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 237
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V Q++ G H++A G +Y++G GQ+G
Sbjct: 238 FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 278
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
E ++ AL +V +S G H+ A G +YAWG + GQ+G+ G + + + S
Sbjct: 23 EREQVVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKS 82
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S+ I++V V+CG H+LAL + ++ G N+Y QL +G
Sbjct: 83 LSD------IQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLG 121
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV IACG H +ALT+ G + SWG+ GQ+G+ S+ D P+ +R L VVQI+
Sbjct: 87 VVIQIACGSRHSMALTEWGQILSWGDNDCGQVGH-STDNDVIELPKILRFLVSRTVVQIA 145
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G HS A T G LY+WG N GQ+GV+ DL H P+ + I + +AC
Sbjct: 146 CGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL-PHSNAPLRLTTIL---GIPLATIAC 201
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSM 176
G H+ + ++++G G N QL +
Sbjct: 202 GGNHSFLISKSSAVFGWGKNTCGQLGL 228
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANME 73
V +P + + V IACG +H LALT G ++SWG+ GQLG P +N
Sbjct: 126 VIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSN-A 184
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + + G+ + I+ GG HS ++ ++ WG N GQ+G ++D ++
Sbjct: 185 PLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLG--------LNDEQNRAY 236
Query: 134 SEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
S + + V V CG +++ L ++ ++ CG Y QL G GVS ++ R+ +
Sbjct: 237 PSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQL--GHGVSNNEMIPRMVI 293
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+PS+++ D V IACG H L LT G V++ GN QLG+ P I
Sbjct: 26 LPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHEL----PTKRPLPIP 81
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L V+QI+ G HS A T+ G + +WG N+ GQVG D V+ P + +
Sbjct: 82 ELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDND-VIELPKILRF----- 135
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ VV +ACG+ H+LAL L+ G N Y QL
Sbjct: 136 LVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 171
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 20/170 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L + + IACG +H +++ VF WG + GQLG A P ++++
Sbjct: 185 PLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAY--PSQLKS 242
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+ LGV ++ G +S T +G ++ G N GQ+G H +S +E
Sbjct: 243 MRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLG------------HGVSNNEMIPR 290
Query: 140 QNIK-----VVDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMGCGVSQV 183
I+ + VACG+RHTLAL ++ G QL +SQ
Sbjct: 291 MVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQT 340
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 13/116 (11%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ S GQLG + + P +I V QI+ G H+ T +G +YA G
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
N+ Q+G E L P P+ + Q V+ +ACGSRH++AL + WG
Sbjct: 63 NDHHQLGHE----LPTKRPLPIP-----ELQAYVVIQIACGSRHSMALTE----WG 105
>gi|408501033|ref|YP_006864952.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465857|gb|AFU71386.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1190
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR--------- 78
D I G+ H LA+ +G ++WG GQLG S G + P +R
Sbjct: 902 DFTYAQIGAGYLHSLAVGSDGYAYAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPND 961
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
A GL V ++AG WHS A DG YAWG+N+ GQ+G D V S S
Sbjct: 962 ADKGLKAVNVTAGFWHSLALGSDGNAYAWGFNSNGQLGNNSSKDSTVPVLVSDSASPTDT 1021
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL---SMGCGVSQVSVMTRLSVPEHV 195
S+ +K V V+ G H+LAL D + + G N Y QL S+ G + + + VP
Sbjct: 1022 SKGLKAVLVSTGQYHSLALGSDGNAYAWGDNGYGQLGNNSIPTGSNNNEARSPVPVPVVF 1081
Query: 196 KNCPIV 201
P++
Sbjct: 1082 NLPPVI 1087
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGV- 85
D ++ G H LA+ +G ++WG G+LG GT + P ++ +G
Sbjct: 734 DFTYVQVSAGSQHSLAVGSDGNAYAWGRNDDGRLG---DGTSTDQHTPVRVKKPAGTSTD 790
Query: 86 ---VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV--VHDPHPMSWSEDFDSQ 140
VQ+SAG HS A DG YAWG+NN GQ+G D V P S DF
Sbjct: 791 FTYVQVSAGYHHSLALGSDGNAYAWGYNNSGQLGDGTSTDRATSVRVKKPAGTSTDF--- 847
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
V V+ G+ H+LAL D + + G N + QL G + +
Sbjct: 848 --TYVQVSAGAFHSLALGSDGNAYAWGLNNFGQLGDGTSTDRAT 889
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 38 FDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA---------LSGLGVVQI 88
F LA+ +G ++WG +G+LG ++ +A P ++ + VQ+
Sbjct: 681 FGFSLAVGSDGNAYAWGGNKKGELGDGTTSENARSTPVMVKQPDRKTYPDLPADFTYVQV 740
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD--LVVHDPHPMSWSEDFDSQNIKVVD 146
SAG HS A DG YAWG N+ G++G D V P S DF V
Sbjct: 741 SAGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPAGTSTDF-----TYVQ 795
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
V+ G H+LAL D + + G+N QL G + + + R+ P
Sbjct: 796 VSAGYHHSLALGSDGNAYAWGYNNSGQLGDGTSTDRATSV-RVKKP 840
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 3776 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 3833
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV I+AGG HSA T G LY WG G++G D + P +
Sbjct: 3834 DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQL--KPKLV 3891
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
+ + +V+D+ACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 3892 EALQGY-----RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 3946
Query: 185 VMTRLSV 191
+T L V
Sbjct: 3947 SLTGLGV 3953
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 3940 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 3997
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 3998 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4051
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4052 -LQGKKINRVACGSAHTLA 4069
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 23/175 (13%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS-GTDANMEPR 75
+P ++ + VV +A G H +ALT +G +FSWG G G+LG+ S D +PR
Sbjct: 2787 IPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCD---KPR 2843
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I AL + I+ G HSAA T G LY WG G++G H +
Sbjct: 2844 LIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG---------HGDNTTQLKP 2894
Query: 136 DFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCGVSQ 182
+ +V+ VACGSR TLAL D+ ++ G ++ +L S GC + Q
Sbjct: 2895 KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 2949
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2732 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 2789
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 2790 QITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLI-- 2845
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 2846 -EALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLK 2893
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 2894 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 2951
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G D+ V P +
Sbjct: 2952 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG--HGTDVHVRKPQVVE----- 3004
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3005 GLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVN 3049
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ V DIACG L LT + V+SWG+G G+LG G+D P +I
Sbjct: 3888 PKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKI 3945
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+GLGVV++ G S A T+ G +Y WG + ++G G D H +
Sbjct: 3946 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQ 3998
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q KV+ +A GS H + +D ++ G N+ QL G
Sbjct: 3999 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4038
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++ +P+
Sbjct: 2946 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVRKPQV 3002
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3003 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3057
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3058 LEGQ--KITRVACGSSHSVA 3075
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ + T ++P+ ++
Sbjct: 2842 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 2899
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 2900 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 2954
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 2955 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 2995
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V DIA G H +T G +++WG G G+LG+ S + ++P+ + A
Sbjct: 3836 PRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDS--EDQLKPKLVEA 3893
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 3894 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 3945
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 3946 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3986
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 26/121 (21%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVF------------------------SWGN 55
P + + +L +T IAC L L++ G V+ SWG+
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVAVFSLIFGQVWSWGD 416
Query: 56 GSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
G G+LG G+D P+ I L L VV++ G S A T+DG +Y+WG + ++
Sbjct: 417 GDYGKLG--RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRL 474
Query: 116 G 116
G
Sbjct: 475 G 475
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L +Q+ G A T DG LYA
Sbjct: 3706 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALAALRPIQLIGGEQTLFAVTADGKLYAT 3763
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 3764 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 3818
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 3819 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDIAAGGAHSA 3858
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ R +
Sbjct: 433 PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH---GTEEHV--RYPKL 487
Query: 80 LSGL 83
L GL
Sbjct: 488 LEGL 491
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4027 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4084
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV I+AGG HSA T G LY WG G++G D + P +
Sbjct: 4085 DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQL--KPKLV 4142
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + +V+D+ACGS TL L DD+++W G +Y +L G
Sbjct: 4143 EALQGY-----RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D + V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4191 KVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4248
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4249 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4302
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4303 -LQGKKINRVACGSAHTLA 4320
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Query: 29 LVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D++CG LA+T+ G V+SWG+G G+LG G+D P+ I L L +V
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDIV 661
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++S G S A T+DG +Y+WG + ++G G + H +P Q KV+D
Sbjct: 662 KVSCGSQFSVALTKDGQVYSWGKGDNQRLG-HGTEE---HVRYPKLLE---GLQGEKVID 714
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
V GS H LAL +D+ ++ G N+ Q
Sbjct: 715 VVAGSTHCLALTEDSEVYSWGSNDQCQ 741
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G VFSWG G G+LG+ T EP+ I ALSG VV I+ G +S
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGH--GDTVPLEEPKMISALSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DV+CGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDQTI----PMLVT---GLKGLKVIDVSCGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ + VV +A G H +ALT +G VFSWG G G+LG+ S
Sbjct: 3030 LGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRM 3089
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY+WG G++G H
Sbjct: 3090 NCD---KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLG---------H 3137
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3138 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3197
Query: 179 GVSQ 182
+ Q
Sbjct: 3198 NIPQ 3201
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2984 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PR 3041
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3042 QITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3097
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3098 -EALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQL 3144
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3203
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G D+ V P +
Sbjct: 3204 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG--HGTDVHVRKPQVVE----- 3256
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K++ VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3257 GLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVN 3301
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ V DIACG L LT + V+SWG+G G+LG G+D P +I
Sbjct: 4139 PKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKI 4196
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+G+GVV++ G S A T+ G +Y WG + ++G G D H +
Sbjct: 4197 DSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQ 4249
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q KV+ +A GS H + +D ++ G N+ QL G
Sbjct: 4250 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4289
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G ++SWG G G+LG+ + T ++P+ ++
Sbjct: 3094 PRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTT--QLKPKMVKV 3151
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3152 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3206
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3207 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3247
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL + ++CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ + AG H A T+D +Y+WG N+ Q D L + P P +
Sbjct: 706 GLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQ-----HFDTLRITKPDPTALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
DS++I V +ACG + A W+ ++ S+G L VP V
Sbjct: 760 DSKHI--VGIACGPAQSFA-----------WSSCSEWSIG-----------LRVPFVVDV 795
Query: 198 CPIV 201
CP+
Sbjct: 796 CPMT 799
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++ +P+
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVRKPQV 3254
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G ++ ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3255 VEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3309
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H+++
Sbjct: 3310 LEGQ--KITRVACGSSHSVS 3327
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS + P + L GL V+ +S
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS--EDQTIPMLVTGLKGLKVIDVSC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D +V V+
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----IVKVS 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQ 688
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V DIA G H +T G +++WG G G+LG+ S + ++P+ + A
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDS--EDQLKPKLVEA 4144
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4196
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4197 DSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4237
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 17/169 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + L VT IAC L L++ G V++ S + P+ +++
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------ILGPQLVQS 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +++WG +GG++ G D V + M +
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRL---GHGDTVPLEEPKMISALSG 547
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
VV +ACGS ++ A+ + L+ G Y +L G Q M
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3957 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4015 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4069
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4070 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDIAAGGAHSA 4109
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + VV IACG H +ALT+ G V SWG+ GQLG + + + P+ IR+
Sbjct: 77 PLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLGQSTDQSIIEL-PKIIRS 135
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VVQI+ G HS A T G LY+WG N GQ+GV+ +L H +P+ +
Sbjct: 136 LVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQEL-SHCNYPLRLTTLL-- 192
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I + +ACG H+ + ++++G G N QL +
Sbjct: 193 -GIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLN 229
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANME 73
+ +P + + V IACG +H LALT G ++SWG+ GQLG P + N
Sbjct: 126 IIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQELSHCNY- 184
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + L G+ + I+ GG HS ++ ++ +G NN GQ+G ++D ++
Sbjct: 185 PLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLG--------LNDESNRAY 236
Query: 134 SEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+ + + V VACG ++ L ++ ++ CG Y QL G +++
Sbjct: 237 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEM 287
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+PS++ D + IACG H L LT G V++ GN + QLG+ P I
Sbjct: 26 IPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACGNNDQAQLGH----NLPTKRPLLIP 81
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L VV I+ G HS A T+ G + +WG N+ GQ+G + ++ P +
Sbjct: 82 ELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLG-QSTDQSIIELPKII---RSLV 137
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
S++ VV +ACG+ H+LAL L+ G N Y QL
Sbjct: 138 SKH--VVQIACGNNHSLALTSCGELYSWGSNIYGQL 171
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L + + IACG +H +++ VF +G + GQLG A P +++
Sbjct: 185 PLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRA--YPTQLKT 242
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L LGV ++ G S T +G ++ G GQ+G + ++ P E S
Sbjct: 243 LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEML----PRMVMELMGS 298
Query: 140 QNIKVVDVACGSRHTLALCDDN-SLWGCGWNEYNQL 174
+ VACG+RHTLAL ++G G QL
Sbjct: 299 ---TITQVACGNRHTLALVPSRGRVYGFGLGSSGQL 331
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+F WGN S GQLG + + P +I + QI+ G H+ T +G +YA G
Sbjct: 3 LFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACGN 62
Query: 110 NNGGQVG--VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
N+ Q+G + K L++ + QN VV +ACGSRH++AL + + G
Sbjct: 63 NDQAQLGHNLPTKRPLLIP-----------ELQNYVVVAIACGSRHSMALTEWGQVLSWG 111
Query: 168 WNEYNQL--SMGCGVSQVSVMTRLSVPEHV 195
N+ QL S + ++ + R V +HV
Sbjct: 112 DNDCGQLGQSTDQSIIELPKIIRSLVSKHV 141
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALT-QEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + + +T +ACG H LAL G V+ +G GS GQLG + T++ P+E+
Sbjct: 288 LPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLG--NRSTNSVTLPQEV 345
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV IACG H +ALT+ G + SWG+ GQ+G+ S+ D P+ +R L VVQI+
Sbjct: 87 VVIQIACGSRHSMALTEWGQILSWGDNDCGQVGH-STDNDVIELPKILRFLVSRTVVQIA 145
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G HS A T G LY+WG N GQ+GV+ DL H P+ + I + +AC
Sbjct: 146 CGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL-PHSNAPLRLTTIL---GIPLATIAC 201
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSM 176
G H+ + ++++G G N QL +
Sbjct: 202 GGNHSFLISKSSAVFGWGKNTCGQLGL 228
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+PS+++ D V IACG H L LT G V++ GN QLG+ P I
Sbjct: 26 LPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHEL----PTKRPLPIP 81
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L V+QI+ G HS A T+ G + +WG N+ GQVG D V+ P + +
Sbjct: 82 ELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDND-VIELPKILRF----- 135
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ VV +ACG+ H+LAL L+ G N Y QL
Sbjct: 136 LVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 171
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANME 73
V +P + + V IACG +H LALT G ++SWG+ GQLG P +N
Sbjct: 126 VIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSN-A 184
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + + G+ + I+ GG HS ++ ++ WG N GQ+G ++D ++
Sbjct: 185 PLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLG--------LNDEQNRAY 236
Query: 134 SEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
S + + V V CG +++ L ++ ++ CG Y QL G G S ++ R+ +
Sbjct: 237 PSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQL--GHGASNNEMIPRMVI 293
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L + + IACG +H +++ VF WG + GQLG A P ++++
Sbjct: 185 PLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRA--YPSQLKS 242
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+ LGV ++ G +S T +G ++ G N GQ+G H S +E
Sbjct: 243 MRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLG------------HGASNNEMIPR 290
Query: 140 QNIK-----VVDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMGCGVSQV 183
I+ + VACG+RHTLAL ++ G QL +SQ
Sbjct: 291 MVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQT 340
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 13/116 (11%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ S GQLG + + P +I V QI+ G H+ T +G +YA G
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
N+ Q+G E L P P+ + Q V+ +ACGSRH++AL + WG
Sbjct: 63 NDHHQLGHE----LPTKRPLPIP-----ELQAYVVIQIACGSRHSMALTE----WG 105
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4025 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4082
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4083 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4140
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVDVACGS TL L DD+++W G +Y +L G
Sbjct: 4141 EA-----LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4183
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4246
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4247 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4300
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4301 -LQGKKVNRVACGSAHTLA 4318
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2981 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PR 3038
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3039 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3094
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3095 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3027 LGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3086
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3087 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3134
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3135 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194
Query: 179 GVSQ 182
+ Q
Sbjct: 3195 NIPQ 3198
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3200
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3253
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3254 GLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 3298
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4205
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4206 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4258
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4259 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4287
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3148
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3203
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3204 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3251
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3306
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3307 LEGQ--KITRVACGSSHSVA 3324
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQ 688
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4085 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4142
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV ++ +G + T D +++WG + G++G G V PM
Sbjct: 4143 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4194
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4195 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4235
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3955 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4013 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4067
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4068 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4107
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG H +AL+ +G VFSWG GS GQLG ++ DA PR I+ L+ ++QIS
Sbjct: 86 IVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-TTIEDAVTVPRLIKKLNQQTILQISC 144
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G WH A DG + WG N+ GQ+G+ GK P S I + VA G
Sbjct: 145 GNWHCLALAADGQFFTWGQNSYGQLGL-GK-----ECPSQASPQRVKSLDGIPLAQVAAG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ AL +++G G N QL +
Sbjct: 199 GAHSFALSLSGAVFGWGKNSSGQLGL 224
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L + +P + + I+CG HCLAL +G F+WG S GQLG
Sbjct: 118 LTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGL-GKECP 176
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ P+ +++L G+ + Q++AGG HS A + G ++ WG N+ GQ+G+ + D
Sbjct: 177 SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDE-----RDRE 231
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ KVV ++CG HT L ++ G QL
Sbjct: 232 SPCHVKLLRSQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 83/150 (55%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ S G+ +P I AL+G +V
Sbjct: 33 DRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS----KPEPIGALAGQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G +++WG + GQ+G+ D V P + + + Q I + +
Sbjct: 89 VACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVT-VPRLI---KKLNQQTI--LQI 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N Y QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLG 172
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG S GQLG S P ++
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL--SDERDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG HTLA + + +GCG
Sbjct: 295 E---VSQIACGRHHTLAFVPSSGMIYAFGCG 322
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVSQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-------SEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P W S D+
Sbjct: 302 GRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKY 361
Query: 143 KVVD-VACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSV 185
+V + G T LC +NSL + N C ++ ++
Sbjct: 362 HIVKHIFSGGDQTFVLCSKYENSLPADDFRTINGTRYTCLINDETI 407
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G S+ EP+ + V +++ GG HS +DG +Y G N
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + P P+ Q+I V VACG H++AL D ++ G
Sbjct: 64 GQLGHESEGS----KPEPIG---ALAGQHI--VHVACGESHSVALSDQGQVFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKN 197
QL + ++ ++VP +K
Sbjct: 115 QLGL------TTIEDAVTVPRLIKK 133
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG H +AL+ +G VFSWG GS GQLG ++ DA PR I+ L+ ++QIS
Sbjct: 86 IVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-TTIEDAVTVPRLIKKLNQQTILQISC 144
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G WH A DG + WG N+ GQ+G+ GK P S I + VA G
Sbjct: 145 GNWHCLALAADGQFFTWGQNSYGQLGL-GK-----ECPSQASPQRVKSLDGIPLAQVAAG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ AL +++G G N QL +
Sbjct: 199 GAHSFALSLSGAVFGWGKNSSGQLGL 224
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L + +P + + I+CG HCLAL +G F+WG S GQLG
Sbjct: 118 LTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGL-GKECP 176
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ P+ +++L G+ + Q++AGG HS A + G ++ WG N+ GQ+G+ + D
Sbjct: 177 SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDE-----RDRE 231
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ KVV ++CG HT L ++ G QL
Sbjct: 232 SPCHVKLLRSQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 83/150 (55%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ S G+ +P I AL+G +V
Sbjct: 33 DRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS----KPELIGALAGQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G +++WG + GQ+G+ D V P + + + Q I + +
Sbjct: 89 VACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVT-VPRLI---KKLNQQTI--LQI 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N Y QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLG 172
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG S GQLG S P ++
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL--SDERDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG HTLA + + +GCG
Sbjct: 295 E---VSQIACGRHHTLAFVPSSGMIYAFGCG 322
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVSQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-------SEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P W S D+
Sbjct: 302 GRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKY 361
Query: 143 KVVD-VACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSV 185
+V + G T LC +NSL + N+ C ++ ++
Sbjct: 362 HIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETI 407
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G S+ EP+ + V +++ GG HS +DG +Y G N
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K +L+ Q+I V VACG H++AL D ++ G
Sbjct: 64 GQLGHESEGSKPELI----------GALAGQHI--VHVACGESHSVALSDQGQVFSWGAG 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
QL + ++ ++VP +K
Sbjct: 112 SDGQLGL------TTIEDAVTVPRLIKK 133
>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
Length = 1187
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 82/155 (52%), Gaps = 15/155 (9%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ G HCLAL+ EG VFSWG G+LG+ ++ PR I +L G VV I+AGG
Sbjct: 394 VNSGGKHCLALSSEGEVFSWGEAEDGKLGH--GNRNSCDRPRVIESLRGKEVVDIAAGGA 451
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS-- 151
HSA T G L+ WG G++G D + P + + ++V+DVACGS
Sbjct: 452 HSACITSTGELFTWGKGRYGRLGHGDSEDQM--KPKLVE-----ALKGVRVIDVACGSGD 504
Query: 152 RHTLALCDDNSLWGCGWNEYNQL----SMGCGVSQ 182
TL + DD+S+W G +Y +L S GC + Q
Sbjct: 505 AQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQ 539
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ + V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 537 IPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSD--DHVRRPRKVA 594
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G V+ I+ G H A T G ++ WG N+ GQ+G +G + P P +
Sbjct: 595 ALQGKNVISIATGSLHCVACTDQGEVFTWGDNDEGQLG-DGSTSAI---PRPRLVAA--- 647
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWN-----EYNQLSMGCGVSQVSVMTRLSVPE 193
Q K+ VACGS H+LA + EYN L ++ + RL +
Sbjct: 648 LQGKKINRVACGSAHSLAWSTSKPVNAGKLPVQVPMEYNHLQ---NITMPVLRNRLVLLH 704
Query: 194 HVKN--CPIVKLF 204
H + CP + +F
Sbjct: 705 HFSDLFCPSIPMF 717
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ + V D+ACG L +T + V+SWG+G G+LG G+D P+++
Sbjct: 484 PKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLG--RGGSDGCKIPQKV 541
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G GVV++ G S A T+ G +Y WG + ++G G D V P ++
Sbjct: 542 EALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLG-HGSDDH-VRRPRKVA----- 594
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q V+ +A GS H +A D ++ G N+ QL G
Sbjct: 595 ALQGKNVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDG 634
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ V DIA G H +T G +F+WG G G+LG+ S + M+P+ + A
Sbjct: 432 PRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDS--EDQMKPKLVEA 489
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+ V+ ++ +G + T D +++WG + G++G G + P + E
Sbjct: 490 LKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKI--PQKV---EAL 544
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q VV V CGS+ ++AL ++ G +Y++L G
Sbjct: 545 IGQG--VVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHG 582
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 94/207 (45%), Gaps = 40/207 (19%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--------PSSGTDAN 71
P R+D +T IACG H LALT G VF+WG+ QLG PS+ + A
Sbjct: 164 PERVDALEPYTITQIACGETHSLALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAP 223
Query: 72 ------------------------MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
PR +RAL+G +VQI G S ++ G ++AW
Sbjct: 224 KTAAASIDDVDELDAATLAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAW 283
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G N GQ+ + +L V P P E + I + +A G RHTLAL + ++ G
Sbjct: 284 GDNTSGQLCLR-ELKTV---PVPTLVKELY---GIPIRQLAAGGRHTLALTFNGQVYSWG 336
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEH 194
N++ QL +G + ++ +RL EH
Sbjct: 337 NNQFGQLGVG-DTAPHTIPSRLKTLEH 362
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ I CG + L L++ G VF+WG+ + GQL T P ++ L G+ + Q++A
Sbjct: 261 IVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVP--VPTLVKELYGIPIRQLAA 318
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVAC 149
GG H+ A T +G +Y+WG N GQ+G V D P + + ++ +AC
Sbjct: 319 GGRHTLALTFNGQVYSWGNNQFGQLG--------VGDTAPHTIPSRLKTLEHQFCAHIAC 370
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
G H++ L + ++ G QL G
Sbjct: 371 GEDHSVVLTETGGVYSFGAGGQGQLGHGT 399
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + + + +A G H LALT G V+SWGN GQLG T + P ++
Sbjct: 301 VPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGV--GDTAPHTIPSRLK 358
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L I+ G HS T+ G +Y++G GQ+G G L + +P + F+
Sbjct: 359 TLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLG-HGTLQNEI-NPRMI-----FE 411
Query: 139 SQNIKVVDVACGSRHTLALC-DDNSLWGCGWNEYNQLSMGCGVS-QVSVMTRLSVPEHVK 196
V CG RHT+ N ++ G QL G GV Q V+T + V +
Sbjct: 412 LMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLV-RVLD 470
Query: 197 NCPIVKL 203
PI+++
Sbjct: 471 ATPILRI 477
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 46/220 (20%)
Query: 20 PSRMDHF----LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P+ ++ F + + + IACG H L L +G V+S G+ +GQLG+ + +P
Sbjct: 111 PTELEAFSSVSMSTLASAIACGRAHTLFLV-DGQVYSCGSNDQGQLGHKKHRS----KPE 165
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMS 132
+ AL + QI+ G HS A T +G ++AWG N Q+G+ E P +
Sbjct: 166 RVDALEPYTITQIACGETHSLALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKT 225
Query: 133 WS------EDFDSQNI------------------KVVDVACGSRHTLALCDDNSLWGCGW 168
+ ++ D+ + K+V + CG+ +L L + ++ G
Sbjct: 226 AAASIDDVDELDAATLAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGD 285
Query: 169 NEYNQLSMGCGVSQVSVMTRLSVPEHVKN---CPIVKLFA 205
N QL + + + VP VK PI +L A
Sbjct: 286 NTSGQLCL-------RELKTVPVPTLVKELYGIPIRQLAA 318
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 48 GIVFSWGNGSRGQLGYPSSG--TDANMEPREIRALSGLGVVQISAGGWHSAARTQ---DG 102
G V++WGN + GQLG + T A EP E+ A S + + +++ A T DG
Sbjct: 83 GSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLVDG 142
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVACGSRHTLALCDDN 161
+Y+ G N+ GQ+G H H S E D+ + + +ACG H+LAL +
Sbjct: 143 QVYSCGSNDQGQLG---------HKKH-RSKPERVDALEPYTITQIACGETHSLALTSNG 192
Query: 162 SLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKD 221
++ G N+ +QL + S TR S P K + ++A L+ +
Sbjct: 193 QVFAWGDNKASQLGLTPSESSRQPSTRSSAP---KTAAASIDDVDELDAATLAYMDFMTR 249
Query: 222 SSIVKLFAGH 231
+V+ GH
Sbjct: 250 PRLVRALTGH 259
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 174 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 228
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++AWG NN GQ+G +S
Sbjct: 229 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLG--------------LSDE 274
Query: 135 EDFDS-------QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
ED +S + KVV ++CG HT L ++ G QL
Sbjct: 275 EDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 321
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 122 PEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 180
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 181 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 234
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++ G N QL +
Sbjct: 235 EGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGL 271
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 80 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQNIVH 135
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 136 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 189
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 190 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 219
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF+WG + GQLG S + P ++
Sbjct: 228 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGL--SDEEDRESPCHVKL 285
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 286 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 341
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 342 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 369
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 291 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 348
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW----------SEDFDS 139
G H+ A G +YA+G GQ+G ++ P W ++ F
Sbjct: 349 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHNGQLSARADRFKY 408
Query: 140 QNIKVVDVACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSVMT-RLSVPEHVK 196
+K + G T LC +NS + NQ ++ ++ R + EH
Sbjct: 409 HIVK--QIFSGGDQTFVLCSKYENSSPAVDFRTVNQAHYTSLINDETIAVWRQKLSEHSN 466
Query: 197 NCPI---VKLF--AEHWNSARL--SVPEHAKDS 222
I V++ A WN + L + EH K S
Sbjct: 467 ANTINGVVQILSSAACWNGSFLEKKIDEHFKTS 499
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Query: 54 GNGSRGQLGYPSSGTDANM-----EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
G + LG G N+ EP+ +S V +++ GG HS +DG +Y G
Sbjct: 47 GKENGNDLGASQPGISTNLRGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 106
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N GQ+G E + + P + D QNI V VACG H+LAL D L+ G
Sbjct: 107 LNTKGQLGHEREGN----KPEQIGALAD---QNI--VHVACGESHSLALSDRGQLFSWGA 157
Query: 169 NEYNQLSMGCGVSQVSV 185
QL + V+V
Sbjct: 158 GSDGQLGLMTTEDSVAV 174
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 79/148 (53%), Gaps = 7/148 (4%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L + + CG H +ALT+ G V+ WG+ S+GQLG G ++ + PR ++ L+ VVQI
Sbjct: 101 LRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGN-GEGQESRLSPRFVKTLAPFTVVQI 159
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G H A +G LYAWG N GQ+G+ V +P + E + + + +A
Sbjct: 160 ACGSNHCLALLNNGALYAWGDNGNGQLGIG-----TVGEPQRVP-VEVTNLLGLPLSQIA 213
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSM 176
CG+ H++ L ++ G N + QL +
Sbjct: 214 CGANHSMVLSKSGVIFVWGSNRFGQLGL 241
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + V IACG +HCLAL G +++WG+ GQLG + G + P E+
Sbjct: 145 PRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRV-PVEVTN 203
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L GL + QI+ G HS ++ G ++ WG N GQ+G+ D + +
Sbjct: 204 LLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFP-----TLLKTLRQ 258
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
Q++K +A G H+ AL ++ GW+ Y
Sbjct: 259 QHVKF--IAAGGAHSAALTAHGGVFTFGWSFYE 289
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
+ +P + + V IA G H L LT G V S G+ QLG S T +P
Sbjct: 38 IVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTT----KPE 93
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWS 134
+ AL L +VQ+ G HS A T+ G +Y WG N+ GQ+G EG+ + P +
Sbjct: 94 PVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRL--SPRFVKTL 151
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
F VV +ACGS H LAL ++ +L+ G N QL +G
Sbjct: 152 APF-----TVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIG 189
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + + L L ++ IACG +H + L++ G++F WG+ GQLG + A P +
Sbjct: 196 RVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAF--PTLL 253
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWN 110
+ L V I+AGG HSAA T G ++ +GW+
Sbjct: 254 KTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWS 286
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
+GN + G+LG PR I L G+ V QI+ G H+ T G + + G N+
Sbjct: 21 FGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDH 80
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
Q+G E + P P++ Q +++V V CG +H++AL + ++ G N
Sbjct: 81 DQLGQE----VSTTKPEPVTAL-----QCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKG 131
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKN 197
QL G G +RLS P VK
Sbjct: 132 QLGNGEGQE-----SRLS-PRFVKT 150
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
S R Q+ L +G N G++G+ G D +V P + E I+V +A G+ H
Sbjct: 9 RSRQRAQNWTL-GFGNTNSGELGLGGIEDHIVRVPRSIPQLE-----GIRVRQIATGAHH 62
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
TL L + CG N+++QL ++ +T L V+ C
Sbjct: 63 TLVLTSHGRVLSCGSNDHDQLGQEVSTTKPEPVTALQCLRIVQVC 107
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + V G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D
Sbjct: 182 QRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-----KDRESPCHV 236
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CG HT L + ++ G QL
Sbjct: 237 KLLRTQ--KVVYISCGEEHTAVLTKNGGVFTFGAGSCGQL 274
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + + G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T++G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I V VACG H+LAL D L WG G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--VHVACGESHSLALSDRGQLFSWGAG 111
>gi|443918756|gb|ELU39128.1| poly(a)+ RNA transport protein [Rhizoctonia solani AG-1 IA]
Length = 634
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 13/170 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+++ ++P+ ++ V IACG DHCLALT+ G V+ WG G + QLG +E
Sbjct: 337 ARIQYLPTTLEALTKDVFVQIACGGDHCLALTESGHVYVWGTGEQFQLGR------KVLE 390
Query: 74 PREIRALSG-----LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
+ R L +V I G +HS A + G +YAWG N Q G+ G+ D ++ P
Sbjct: 391 RHKKRGLFPEKLHLRNIVSIGCGAYHSFAIDKKGVVYAWGLNVKRQCGIPGEEDQILQ-P 449
Query: 129 HPM-SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P+ + D + +V+ + G+ H++ + D ++ CG +QL +G
Sbjct: 450 TPIPALHPDVLGHDARVIQASGGNHHSVFVTSDGRVYACGTLTDSQLGIG 499
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 56/143 (39%), Gaps = 32/143 (22%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALS-----------GLGVVQISAGGWHSAAR 98
+ +GNG Q G + T PR + G GV ++AGG H+ A
Sbjct: 191 ILVFGNGDSSQFGMGPNATGEYPRPRMQKFFKTASDEGKLGGEGAGVESLAAGGLHTLAI 250
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS---------------QNIK 143
+ G ++ WG N+ G +G +V P P S+ DS + +
Sbjct: 251 DEAGKVWTWGTNDDGALG------RLVEGPDPEDPSKTIDSDVAESTPTVLNTLAEEQFR 304
Query: 144 VVDVACGSRHTLALCDDNSLWGC 166
V VA G+ +LAL + L G
Sbjct: 305 AVSVAAGNNVSLALGTNGQLRGA 327
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
++ P+ ++ D + + G +ALT G V+SWG G LG+ + +P
Sbjct: 70 YYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPER 129
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL----------VVH 126
I L G + QIS G +H AA T+DG +Y WG G++G E +L + H
Sbjct: 130 IEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSH 189
Query: 127 DPHPMSW-SEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
D S + +S NIK VACG + T+ L +D ++ G+N+Y L VS
Sbjct: 190 DYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGY------VS 243
Query: 185 VMTRLSVPEHVKNC-PIVKLFA 205
++ P+ +K+ IVK+ A
Sbjct: 244 DQNSVTTPQLIKDLNDIVKISA 265
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 21/187 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D+V I+ G+ C A+T++G +++WGN GQLG S + +
Sbjct: 251 PQLIKDLNDIV--KISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQS-----LYQTKPSI 303
Query: 80 LSGLG----VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
++G G +V +S G AA TQ G LY WG+ GQ+G K DL + P + + +
Sbjct: 304 VTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDL--YAPRHVEFKQ 361
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV-SQVSVMTRLSVPEH 194
K++ +ACG H + +DN L+ G QL +G V S+ S+ + ++ ++
Sbjct: 362 -------KIIKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQY 414
Query: 195 VKNCPIV 201
K +V
Sbjct: 415 FKGKQVV 421
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQIS 89
+ D++CG + ALTQ+G +++WG G GQLG+ G +++ PR + +++I+
Sbjct: 313 IVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGH---GNKSDLYAPRHVEFKQ--KIIKIA 367
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GG H+A T+D LY +G + GQ+G+ + + + F + +VVDV C
Sbjct: 368 CGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGK--QVVDVTC 425
Query: 150 GSRHTLALCDD 160
G HT+A+ +
Sbjct: 426 GGEHTIAITQE 436
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 47 EGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYA 106
E IV+SWG G GQLG + + P EI L+ + ++ AG S A T +G +Y+
Sbjct: 48 ETIVYSWGYGGFGQLGLQNE--NNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYS 105
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
WG N GG +G E +L + P + E + IK ++CG H A+ +D ++
Sbjct: 106 WGKNKGGILGHEDRLSFNMTQPERI---EKLLGKKIK--QISCGQFHMAAVTEDGEVYTW 160
Query: 167 GWNEYNQL 174
G E+ +L
Sbjct: 161 GNKEFGKL 168
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P + L + DIA G H ALT +G V+ WG G G+LG+ + + M
Sbjct: 234 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 293
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHD 127
P+++ L+G +VQ+S GG HS A TQDG ++++G + G++G K +++
Sbjct: 294 PQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVEVPTDI 353
Query: 128 PHPMSWSEDFDSQNIKVVD-VACGSRHTLALCD 159
P P S S +++ + VACG RHTLA+ +
Sbjct: 354 PPPKSLSGTEEAEGHWIAKLVACGGRHTLAIVE 386
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 16/189 (8%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G +K +S +P R+ + + IA G H LAL ++G +++WGN GQLG +
Sbjct: 182 GDIKQIS----VPVRVQGLEKVKL--IAVGAFHNLALQEDGTLWAWGNNEYGQLG--TGD 233
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
T +P ++ LSGL +V I+AGGWHS A T DG +Y WG G++G
Sbjct: 234 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 293
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ---VS 184
P ++ D +V ++CG H++AL D ++ G ++ +L G V+ V
Sbjct: 294 PQKVNLLAGED-----IVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVE 348
Query: 185 VMTRLSVPE 193
V T + P+
Sbjct: 349 VPTDIPPPK 357
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 48/194 (24%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G + LA+ +G +F+WG RG LG+P+ N+ P +++AL+ + +VQ +
Sbjct: 40 VRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGHPAETKTENI-PSQVKALNNVNIVQAAI 98
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEG----------KLDLVV--------------- 125
GGWH A G YAWG N GQ G E + D+V+
Sbjct: 99 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAA 158
Query: 126 ---------HDPHPMSWSEDFDSQNIKVVDV-------------ACGSRHTLALCDDNSL 163
+ H +W + + +IK + V A G+ H LAL +D +L
Sbjct: 159 GGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTL 218
Query: 164 WGCGWNEYNQLSMG 177
W G NEY QL G
Sbjct: 219 WAWGNNEYGQLGTG 232
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 28/134 (20%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPRE----IRALSGLGVVQISAGGWHSAARTQDGFLY 105
+ +WG G GQLG + E +E + AL V + AG +S A DG L+
Sbjct: 7 LIAWGAGEDGQLGIGIN------EEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLF 60
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPM-SWSEDFDSQ-----NIKVVDVACGSRHTLALCD 159
WGWN G +G HP + +E+ SQ N+ +V A G H LA+ D
Sbjct: 61 TWGWNQRGTLG------------HPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDD 108
Query: 160 DNSLWGCGWNEYNQ 173
+ G NEY Q
Sbjct: 109 QGRAYAWGGNEYGQ 122
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 15/75 (20%)
Query: 104 LYAWGWNNGGQVGV----EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
L AWG GQ+G+ E + VV+ P KV V GSR++LA+CD
Sbjct: 7 LIAWGAGEDGQLGIGINEEKEWVCVVNALEPY-----------KVRSVVAGSRNSLAICD 55
Query: 160 DNSLWGCGWNEYNQL 174
D L+ GWN+ L
Sbjct: 56 DGKLFTWGWNQRGTL 70
>gi|351711665|gb|EHB14584.1| Putative E3 ubiquitin-protein ligase HERC3 [Heterocephalus glaber]
Length = 1051
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ +G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ GK P + E
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFSSQASPQRVRSLE---- 188
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + VA G H+ AL +++G G N QL +
Sbjct: 189 -GIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + + ++CG HCLAL +G F+WG S GQLG + + P+ +R
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFS-SQASPQRVR 185
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-------EGKLDLVVHDPHPM 131
+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ +G LD +
Sbjct: 186 SLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKGIKQGALDKTENIRGLY 245
Query: 132 SWSED------FDSQNIKVVDVACGSRHTLALCDDN 161
S E +Q KVV ++CG HT L ++
Sbjct: 246 SNRESPCHVKLLRTQ--KVVYISCGDEHTAVLTKEH 279
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I + VACG H+LAL D L WG G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDQGQLFSWGAG 111
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ + PR I+
Sbjct: 75 PEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAV-PRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-----EDRESPCHV 236
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CG HT L ++ G QL
Sbjct: 237 KLLRAQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG DH + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 33 DRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADEHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ + V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S + P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKY 361
Query: 143 KVVD-VACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSVMT-RLSVPEHVKNC 198
+V + G T LC +NS + NQ ++ ++ R + EH
Sbjct: 362 HIVKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNAN 421
Query: 199 PI---VKLF--AEHWNSARL--SVPEHAKDS 222
I V++ A WN + L + EH K S
Sbjct: 422 TINGVVQILSSAACWNGSFLEKKIDEHFKTS 452
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + + P + D +V VACG H+LAL D L+ G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD-----EHIVHVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSV 185
QL + V+V
Sbjct: 115 QLGLMTTEESVAV 127
>gi|301120392|ref|XP_002907923.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262102954|gb|EEY61006.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 255
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
K +Q+ H+P R+ V IACG+ H L T EG V+SWG+G GQLG + +
Sbjct: 16 KASAQIVHLPPRLQ------VASIACGWKHSLLATAEGDVYSWGSGRHGQLGLGAEALKS 69
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
P+ I L G ++ + G HS R+ DG +Y G N GQ+G L + V DP
Sbjct: 70 EA-PKRIETLKGTAIINVFCGWEHSVFRSSDGDIYTCGNNRHGQLGQVNALPIQVVDPSN 128
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ S ++ V+CG L L D L G + QL +G
Sbjct: 129 SNIS-------LRTAQVSCGWHFVLCLTDTGKLVTWGKGSHGQLGLG 168
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG +H + +T G +++ G G G LG+ A++E E + V+ I+AGG
Sbjct: 188 VACGSEHSMVVTTSGDLYTCGWGEHGNLGHGDKTNRASLEKVEFFINNNQKVISIAAGGA 247
Query: 94 HSAART 99
S A T
Sbjct: 248 VSIAVT 253
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V+ IACG +H +ALT +G +++WG+ GQLG S T ++P+ I L+ + + I+
Sbjct: 138 VIVQIACGTEHSIALTNDGELYAWGSNREGQLGL-GSYTTTEIKPKRISTLAAVPIAFIA 196
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GG+H+ ++ G +++WG N GQ+G L+ V P +N KV C
Sbjct: 197 CGGYHTIVISKSGAVFSWGRNTFGQLG----LNDVQQRNLPCQLRT---LRNAKVCYATC 249
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
G ++ L D ++ CG Y QL G +++
Sbjct: 250 GEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEI 283
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 8/170 (4%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V IACG H LA+ + G +FSWG GQLG S + PR I+ L +VQI
Sbjct: 84 FVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERV-PRMIKVLGTNVIVQI 142
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G HS A T DG LYAWG N GQ+G+ G P +S + + +A
Sbjct: 143 ACGTEHSIALTNDGELYAWGSNREGQLGL-GSYTTTEIKPKRIS-----TLAAVPIAFIA 196
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
CG HT+ + +++ G N + QL + V Q ++ +L + K C
Sbjct: 197 CGGYHTIVISKSGAVFSWGRNTFGQLGLN-DVQQRNLPCQLRTLRNAKVC 245
Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP +D V IACG ++ +A+T+EG V+S GN GQLG+ + + P
Sbjct: 24 MPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGNNDYGQLGHEKARKRLQLIP---- 79
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L +I+ G H+ A + G L++WG N GQ+G+ +D P +
Sbjct: 80 GLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLN-SVDCTERVPRMIK----VL 134
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
N+ +V +ACG+ H++AL +D L+ G N QL +G
Sbjct: 135 GTNV-IVQIACGTEHSIALTNDGELYAWGSNREGQLGLG 172
Score = 60.1 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + IACG H + +++ G VFSWG + GQLG + P ++R
Sbjct: 181 PKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGL--NDVQQRNLPCQLRT 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V + G S T DG ++ G GQ+G + ++ P E S
Sbjct: 239 LRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEIL----PRQVMELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNS---LWGCG 167
V ++CG RHTLAL WG G
Sbjct: 295 ---TVTQISCGKRHTLALVPSRGRVYAWGLG 322
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q ++P ++ + V CG + + LT +G VF+ G G GQLG+ T + P
Sbjct: 228 QQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGH--GNTTNEILP 285
Query: 75 REIRALSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVG 116
R++ L G V QIS G H+ A G +YAWG GQ+G
Sbjct: 286 RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALT-QEGIVFSWGNGSRGQLGYPSS 66
+P ++ + VT I+CG H LAL G V++WG G GQLG +S
Sbjct: 284 LPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRAS 332
>gi|328865764|gb|EGG14150.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
Length = 1011
Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
+ V +P+ + HF D V V IACG DH +A+ Q+G VFSWG G+LGY S+
Sbjct: 310 TDVVSLPTMVAHFPDQVKVVGIACGQDHSMAVCQDGRVFSWGQAGFGKLGY-SNPMGFQS 368
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
PR + ++ Q+S G WHS T G +YA+G N G+ G E L V P+ +
Sbjct: 369 TPRRVESIPACK--QVSCGNWHSLTLTNGGDVYAFGSNREGRCGRE--LTTVESPPNRVI 424
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
FD+ NIK+ + G L N ++ G N+ QL +
Sbjct: 425 ----FDA-NIKIKKIGAGLNFNAVLTTSNMIYTWGNNDKGQLGV 463
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 15/192 (7%)
Query: 24 DHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+H + V+++ G + L LT G+++SWG S G+LG S D + P +I L
Sbjct: 216 NHHQEHGVSNVQFGGNFALMLTDTGMIYSWGLCSYGKLG-QYSKNDCPI-PSQIMELKNK 273
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
+ QI+ G HS A + G +YAWG GG++G+ K D VV P ++ D +K
Sbjct: 274 QITQIACGKDHSLALDEIGCVYAWGNGAGGRLGLN-KTD-VVSLPTMVAHFPD----QVK 327
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
VV +ACG H++A+C D ++ G + +L + M S P V++ P K
Sbjct: 328 VVGIACGQDHSMAVCQDGRVFSWGQAGFGKLGYS------NPMGFQSTPRRVESIPACKQ 381
Query: 204 FA-EHWNSARLS 214
+ +W+S L+
Sbjct: 382 VSCGNWHSLTLT 393
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+PS++ + +T IACG DH LAL + G V++WGNG+ G+LG + TD P +
Sbjct: 263 IPSQIMELKNKQITQIACGKDHSLALDEIGCVYAWGNGAGGRLGL--NKTDVVSLPTMVA 320
Query: 79 AL-SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-SED 136
+ VV I+ G HS A QDG +++WG G++G +PM + S
Sbjct: 321 HFPDQVKVVGIACGQDHSMAVCQDGRVFSWGQAGFGKLGYS----------NPMGFQSTP 370
Query: 137 FDSQNIKVV-DVACGSRHTLALCDDNSLWGCGWN 169
++I V+CG+ H+L L + ++ G N
Sbjct: 371 RRVESIPACKQVSCGNWHSLTLTNGGDVYAFGSN 404
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L +S P + ++ IACG H +ALT G +++WG+ S GQLG G+D
Sbjct: 118 LDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGL---GSD 174
Query: 70 ANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
ME P+ + +L+ + + ++ GG+H+ ++ G ++AWG N GQ+G+ + V
Sbjct: 175 TKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNV-- 232
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
P + +N +V ACG ++ L D ++ CG Y QL G S++
Sbjct: 233 PCQLR-----TLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEI 283
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L ACG H L + + G +FSWG+ GQLG EPR ++ L +VQI
Sbjct: 84 LAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIR-EPRMVKTLGTKIIVQI 142
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
+ G HS A T +G LYAWG N+ GQ+G+ + K++L H ++ + +
Sbjct: 143 ACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLA--------AVPIAF 194
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
VACG HT+ + +++ G N + QL +
Sbjct: 195 VACGGYHTIVISKSGAVFAWGRNTFGQLGL 224
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P ++ + V ACG + + LT +G VF+ G G GQLG+ + ++ + PR+I
Sbjct: 231 NVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSE--ILPRQI 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V QIS G H+ A G +YAWG GQ+G
Sbjct: 289 MELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG H + +++ G VF+WG + GQLG S + N+ P ++R L V + G
Sbjct: 195 VACGGYHTIVISKSGAVFAWGRNTFGQLGL-SDIQNRNV-PCQLRTLRNSRVCYAACGEE 252
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
S T DG ++ G GQ+G K ++ P E S V ++CG RH
Sbjct: 253 FSVFLTMDGGVFTCGAGMYGQLGHGNKTSEIL----PRQIMELMGS---TVTQISCGRRH 305
Query: 154 TLALCDDNS---LWGCG 167
TLAL WG G
Sbjct: 306 TLALVPSRGRVYAWGLG 322
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+F WG+ G+LG + PRE+ + QI+ G ++ A T++G +Y+ G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60
Query: 110 NNGGQVGVE-GKLDL-VVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
N+ GQ+G E G+ L ++ P+++ + ACGS HTL + + L+ G
Sbjct: 61 NDHGQLGQEKGRKRLQLISGIDPLAFRK-----------AACGSSHTLVVNEWGQLFSWG 109
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
N QL G+ +VS R P VK
Sbjct: 110 SNVEGQL----GLDRVSATIR--EPRMVKT 133
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4053 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4110
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4111 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4168
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
Q +VVD+ACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 4169 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 4223
Query: 185 VMTRLSV 191
+T L V
Sbjct: 4224 SLTGLGV 4230
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4217 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4274
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4275 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4328
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4329 -LQGKKVNRVACGSAHTLA 4346
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2980 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3037
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3038 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3093
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3094 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3140
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 616
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRG 640
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3199
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3252
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3253 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3026 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3085
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3086 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3133
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3134 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193
Query: 179 GVSQ 182
+ Q
Sbjct: 3194 NIPQ 3197
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4176 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4233
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4234 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4286
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4287 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4315
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3090 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3147
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3203 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3243
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3250
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3305
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3306 LEGQ--KITRVACGSSHSVA 3323
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 758
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 759 DTKHI--VGIACGPAQSFA 775
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 610
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQ 687
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4113 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4170
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4171 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4222
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4223 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4263
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 489
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 490 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 545
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 546 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 586
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3983 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4040
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4041 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4095
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4096 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4135
>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 1082
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 271 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 328
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 329 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 386
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
Q +VVDVACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 387 EA-----LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 441
Query: 185 VMTRLSV 191
+T L V
Sbjct: 442 SLTGLGV 448
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 436 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 493
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 494 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA----- 546
Query: 139 SQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 547 LQGKKVNRVACGSAHTLA 564
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 394 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 451
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G D H + Q KV+ +A
Sbjct: 452 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGS-------DDHVRRPRQVQGLQGKKVIAIA 504
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 505 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 533
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 331 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 388
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV ++ +G + T D +++WG + G++G G V PM
Sbjct: 389 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 440
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 441 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 481
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 201 GTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 258
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 259 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 313
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 314 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 353
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4022 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4079
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4137
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 4138 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4243
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4244 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4297
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4298 -LQGKKVNRVACGSAHTLA 4315
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2980 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3037
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3038 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3093
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3094 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3140
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 616
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRG 640
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3199
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3252
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3253 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3026 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3085
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3086 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3133
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3134 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193
Query: 179 GVSQ 182
+ Q
Sbjct: 3194 NIPQ 3197
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4202
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4255
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4256 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3090 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3147
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3203 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3243
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3250
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3305
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3306 LEGQ--KITRVACGSSHSVA 3323
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 758
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 759 DTKHI--VGIACGPAQSFA 775
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 610
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQ 687
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4139
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4191
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4192 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 489
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 490 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 545
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 546 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 586
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3952 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4010 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4064
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4065 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4104
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 3769 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 3826
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 3827 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 3884
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
Q +VVD+ACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 3885 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 3939
Query: 185 VMTRLSV 191
+T L V
Sbjct: 3940 SLTGLGV 3946
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 3933 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 3990
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 3991 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4044
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4045 -LQGKKVNRVACGSAHTLA 4062
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 616
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRG 640
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 3892 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 3949
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 3950 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4002
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4003 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4031
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 758
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 759 DTKHI--VGIACGPAQSFA 775
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 610
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQ 687
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
MP ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ +
Sbjct: 2837 RMPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMV 2894
Query: 78 RALSGLGVVQISAGGW--HSAARTQDGFLYAWG----WNNGGQVGVEGKLDLVVHDPHPM 131
+ L G V+Q++ G + A T +G +++ G W G V+G + P +
Sbjct: 2895 KVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKG-----CNIPQNI 2949
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
E + Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 2950 ---ERLNGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2993
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 2944 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3000
Query: 77 IRALSGLGVVQIS-AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L G +V S +G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3001 VEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQ 3055
Query: 136 DFDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3056 GLEGQ--KITRVACGSSHSVA 3074
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 3829 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 3886
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 3887 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 3938
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 3939 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3979
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 12 MLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQ---LGYPSSGT 68
+ ++ +PS + L V +A G A+T EG V++ G ++ LG SSGT
Sbjct: 2726 LKNKKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATKWPAWGLGI-SSGT 2784
Query: 69 DANMEPREIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
+ I ALS V V + +G + DG +++WG + G++G ++ ++
Sbjct: 2785 -VPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSRMPRLI- 2842
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 2843 --------EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 2890
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 489
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 490 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 545
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 546 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 586
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3699 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3756
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 3757 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 3811
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 3812 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 3851
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4022 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4079
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4137
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 4138 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4243
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4244 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4297
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4298 -LQGKKVNRVACGSAHTLA 4315
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2980 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3037
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3038 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3093
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3094 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3140
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 616
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRG 640
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3199
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3252
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3253 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3026 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3085
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3086 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3133
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3134 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193
Query: 179 GVSQ 182
+ Q
Sbjct: 3194 NIPQ 3197
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4202
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4255
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4256 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3090 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3147
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3203 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3243
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3250
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3305
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3306 LEGQ--KITRVACGSSHSVA 3323
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 758
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 759 DTKHI--VGIACGPAQSFA 775
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 610
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQ 687
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4139
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4191
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4192 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 489
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 490 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 545
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 546 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 586
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3952 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4010 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4064
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4065 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4104
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 3311 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 3368
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 3369 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 3426
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 3427 EAL-----QGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3469
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 3475 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 3532
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 3533 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 3586
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 3587 -LQGKKVNRVACGSAHTLA 3604
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2269 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 2326
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 2327 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 2382
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 2383 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 2429
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 2431 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 2488
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 2489 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 2541
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 2542 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 2586
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 2315 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 2374
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 2375 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 2422
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 2423 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 2482
Query: 179 GVSQ 182
+ Q
Sbjct: 2483 NIPQ 2486
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 3434 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 3491
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 3492 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 3544
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 3545 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3573
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 2379 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 2436
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 2437 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 2491
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 2492 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2532
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 2483 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 2539
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 2540 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 2594
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 2595 LEGQ--KITRVACGSSHSVA 2612
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 3371 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 3428
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 3429 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 3480
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 3481 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3521
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3241 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3298
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 3299 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 3353
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 3354 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 3393
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4022 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4079
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4137
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 4138 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4243
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4244 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4297
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4298 -LQGKKVNRVACGSAHTLA 4315
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2980 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3037
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3038 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3093
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3094 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3140
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 616
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRG 640
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3199
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3252
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3253 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3026 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3085
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3086 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3133
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3134 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193
Query: 179 GVSQ 182
+ Q
Sbjct: 3194 NIPQ 3197
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4202
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4255
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4256 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3090 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3147
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3203 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3243
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3250
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3305
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3306 LEGQ--KITRVACGSSHSVA 3323
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 758
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 759 DTKHI--VGIACGPAQSFA 775
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 610
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQ 687
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4139
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4191
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4192 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 489
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 490 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 545
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 546 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 586
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3952 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4010 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4064
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4065 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4104
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4022 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4079
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4137
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 4138 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4243
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4244 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4297
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4298 -LQGKKVNRVACGSAHTLA 4315
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2980 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3037
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3038 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3093
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3094 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3140
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 616
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRG 640
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3199
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3252
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3253 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3026 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3085
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3086 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3133
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3134 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193
Query: 179 GVSQ 182
+ Q
Sbjct: 3194 NIPQ 3197
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4202
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4255
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4256 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3090 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3147
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3203 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3243
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3250
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3305
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3306 LEGQ--KITRVACGSSHSVA 3323
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 758
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 759 DTKHI--VGIACGPAQSFA 775
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 610
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQ 687
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4139
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4191
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4192 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 489
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 490 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 545
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 546 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 586
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3952 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4010 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4064
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4065 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4104
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4022 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4079
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4137
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 4138 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4243
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4244 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4297
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4298 -LQGKKVNRVACGSAHTLA 4315
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2980 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3037
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3038 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3093
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3094 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3140
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 616
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRG 640
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3199
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3252
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3253 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3026 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3085
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3086 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3133
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3134 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193
Query: 179 GVSQ 182
+ Q
Sbjct: 3194 NIPQ 3197
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4202
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4255
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4256 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3090 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3147
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3203 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3243
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3250
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3305
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3306 LEGQ--KITRVACGSSHSVA 3323
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 758
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 759 DTKHI--VGIACGPAQSFA 775
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 610
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQ 687
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4139
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4191
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4192 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 489
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 490 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 545
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 546 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 586
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3952 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4010 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4064
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4065 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4104
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4027 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4084
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4085 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4142
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 4143 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4191 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4248
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4249 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4302
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4303 -LQGKKVNRVACGSAHTLA 4320
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2985 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3042
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3043 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3098
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3099 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3145
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 509
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 510 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 562
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 563 TLAVTENGQVWSWGDGDYGKLGRG 586
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3147 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3204
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3205 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3257
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3258 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3302
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3031 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3090
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3091 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3138
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3139 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3198
Query: 179 GVSQ 182
+ Q
Sbjct: 3199 NIPQ 3202
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4150 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4207
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4208 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4260
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4261 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4289
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3095 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3152
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3153 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3207
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3208 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3248
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3199 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3255
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3256 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3310
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3311 LEGQ--KITRVACGSSHSVA 3328
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 594 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 650
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 651 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 704
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 705 DTKHI--VGIACGPAQSFA 721
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 499 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 556
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 557 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 609
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 610 CGSQFSIALTKDGQVYSWGKGDNQ 633
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4087 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4144
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4145 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4196
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4197 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4237
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 435
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 436 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 491
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 492 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 532
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3957 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4015 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4069
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4070 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4109
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 3913 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 3970
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 3971 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4028
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 4029 EV-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4071
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4077 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4134
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4135 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4188
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4189 -LQGKKVNRVACGSAHTLA 4206
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2981 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PR 3038
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3039 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3094
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3095 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3027 LGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3086
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3087 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3134
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3135 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194
Query: 179 GVSQ 182
+ Q
Sbjct: 3195 NIPQ 3198
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4036 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4093
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4094 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4146
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4147 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4175
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPTALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D V+ V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VIKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQ 688
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3148
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3203
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLW 164
+ Q V + CG++ +LAL +W
Sbjct: 3204 NGQG--VCQIECGAQFSLALTKSGVVW 3228
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ +
Sbjct: 3973 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEV 4030
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4031 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4082
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4083 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4123
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3200
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAW 107
L+G GV QI G S A T+ G ++ W
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G L L P S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L +Q+ G A T DG LYA
Sbjct: 3843 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPIQLIGGEQTLFAVTADGKLYAT 3900
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 3901 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 3955
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 3956 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 3995
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4022 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4079
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4137
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 4138 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4243
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4244 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4297
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4298 -LQGKKVNRVACGSAHTLA 4315
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2980 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3037
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3038 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3093
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3094 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3140
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 616
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRG 640
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3199
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3252
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3253 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3026 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3085
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3086 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3133
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3134 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193
Query: 179 GVSQ 182
+ Q
Sbjct: 3194 NIPQ 3197
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4202
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4255
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4256 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3090 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3147
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3203 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3243
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3250
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3305
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3306 LEGQ--KITRVACGSSHSVA 3323
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 758
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 759 DTKHI--VGIACGPAQSFA 775
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 610
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQ 687
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4139
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4191
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4192 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 489
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 490 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 545
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 546 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 586
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3952 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4010 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4064
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4065 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4104
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4017 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4074
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4075 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4132
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 4133 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4175
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4181 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4238
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4239 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4292
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4293 -LQGKKVNRVACGSAHTLA 4310
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2975 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3032
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3033 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3088
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3089 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3135
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 616
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRG 640
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3137 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3194
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3195 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3247
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3248 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3292
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3021 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3080
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3081 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3128
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3129 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3188
Query: 179 GVSQ 182
+ Q
Sbjct: 3189 NIPQ 3192
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4140 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4197
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4198 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4250
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4251 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4279
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3085 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3142
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3143 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3197
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3198 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3238
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3189 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3245
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3246 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3300
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3301 LEGQ--KITRVACGSSHSVA 3318
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 758
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 759 DTKHI--VGIACGPAQSFA 775
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 610
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQ 687
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4077 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4134
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4135 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4186
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4187 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4227
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 489
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 490 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 545
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 546 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 586
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3947 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4004
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4005 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4059
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4060 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4099
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4022 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4079
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4137
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 4138 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4243
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4244 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4297
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4298 -LQGKKVNRVACGSAHTLA 4315
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2980 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3037
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3038 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3093
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3094 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3140
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 616
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRG 640
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3199
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3252
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3253 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3026 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3085
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3086 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3133
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3134 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193
Query: 179 GVSQ 182
+ Q
Sbjct: 3194 NIPQ 3197
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4202
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4255
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4256 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3090 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3147
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3203 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3243
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3250
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3305
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3306 LEGQ--KITRVACGSSHSVA 3323
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 758
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 759 DTKHI--VGIACGPAQSFA 775
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 610
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQ 687
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4139
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4191
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4192 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 489
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 490 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 545
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 546 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 586
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3952 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4010 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4064
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4065 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4104
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4022 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4079
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4137
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 4138 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4243
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4244 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4297
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4298 -LQGKKVNRVACGSAHTLA 4315
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2980 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3037
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3038 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3093
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3094 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3140
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 616
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRG 640
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3199
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3252
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3253 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3026 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3085
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3086 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3133
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3134 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193
Query: 179 GVSQ 182
+ Q
Sbjct: 3194 NIPQ 3197
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4202
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4255
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4256 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3090 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3147
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3203 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3243
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3250
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3305
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3306 LEGQ--KITRVACGSSHSVA 3323
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 758
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 759 DTKHI--VGIACGPAQSFA 775
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 610
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQ 687
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4139
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4191
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4192 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 489
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 490 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 545
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 546 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 586
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3952 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4010 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4064
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4065 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4104
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 3718 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 3775
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 3776 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 3833
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 3834 EAL-----QGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3876
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 3882 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 3939
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 3940 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 3993
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 3994 -LQGKKVNRVACGSAHTLA 4011
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2676 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 2733
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 2734 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 2789
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 2790 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 2836
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 2838 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 2895
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 2896 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 2948
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 2949 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 2993
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 2722 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 2781
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 2782 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 2829
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 2830 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 2889
Query: 179 GVSQ 182
+ Q
Sbjct: 2890 NIPQ 2893
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 3841 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 3898
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 3899 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 3951
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 3952 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3980
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 2786 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 2843
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 2844 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 2898
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 2899 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2939
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 2890 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 2946
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 2947 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3001
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3002 LEGQ--KITRVACGSSHSVA 3019
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 78/165 (47%), Gaps = 31/165 (18%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 461 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 518
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 519 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 571
Query: 154 TLALCDDNS-----LWGCGWN-----------EYNQLSMGCGVSQ 182
TLA+ ++ + LW YNQL +GC Q
Sbjct: 572 TLAVTENETTRLSVLWRSVLGILCVSGVVESFRYNQLGVGCRCRQ 616
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 3778 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 3835
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 3836 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 3887
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 3888 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3928
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 397 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 444
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 445 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 500
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 501 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 541
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 508 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 565
Query: 91 G 91
G
Sbjct: 566 G 566
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3648 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3705
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 3706 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 3760
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 3761 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 3800
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 9/153 (5%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H P +D + + IACG H + LT+EG V++WG G G+LG+ +G PR +
Sbjct: 23 HRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDNG--WKFVPRLV 80
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G + Q++ G +H+AA T G LY WG G+ GKL H + +
Sbjct: 81 EELRGKNIRQVTCGSYHTAAVTVSGDLYTWGG------GMYGKLGHGNETGHSTPYLVE- 133
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
++++V VACGSRHT+ L ++ ++ G E
Sbjct: 134 TLKSMQVRQVACGSRHTVVLLENKDVYTWGDKE 166
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+V ACGF H AL++ G VF++G G G+LG+ S R + AL+G V Q++
Sbjct: 193 IVQISACGF-HTAALSEFGEVFTFGEGKFGRLGHNSERNQP--VARFVDALAGKRVKQVA 249
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GG+H+AA T+ G +Y WG GQ+G K++ V P + V+ + C
Sbjct: 250 CGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTV----PTRVESLLEKL---VLQITC 302
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQL 174
G HT+ L D ++ G ++ +L
Sbjct: 303 GWSHTVTLTDTGEVYTWGNGDHGKL 327
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 9/171 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V +ACG H + L + V++WG+ G G+ + + P +
Sbjct: 129 PYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYL-PCPVEE 187
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G +VQISA G+H+AA ++ G ++ +G G++G + + P++ D +
Sbjct: 188 LRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERN------QPVARFVDALA 241
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
+V VACG HT A+ + ++ G E+ QL G V++ +V TR+
Sbjct: 242 GK-RVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNK-TVPTRVE 290
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 17/132 (12%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V+SWG G GQLG T P I AL+ +VQI+ G H+ T++G +Y WG
Sbjct: 3 VYSWGRGEDGQLGLGD--TSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSW----SEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
+ G++G H + + E+ +NI+ V CGS HT A+ L+
Sbjct: 61 GDDGRLG---------HGDNGWKFVPRLVEELRGKNIR--QVTCGSYHTAAVTVSGDLYT 109
Query: 166 CGWNEYNQLSMG 177
G Y +L G
Sbjct: 110 WGGGMYGKLGHG 121
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+R++ L+ +V I CG+ H + LT G V++WGNG G+LG+ + T P+ +
Sbjct: 285 VPTRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGH--NDTAKVTLPKPVD 342
Query: 79 ALSGLGVVQISAGGWHSAA 97
L G V+ +++ H+ A
Sbjct: 343 VLDGKRVISVASYNEHTVA 361
>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
Length = 1207
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 80/166 (48%), Gaps = 21/166 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG HCLALT++G VFSWG G+ GQLG + P I L G GVV ++A
Sbjct: 142 VISVACGTRHCLALTRDGRVFSWGEGADGQLG--DGQFVSRHSPEVIADLRGKGVVSVAA 199
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD---- 146
G +S A T +YA+G N+ GQ+GV + F ++ +D
Sbjct: 200 GSTYSLAVTGADQVYAFGSNSKGQLGVGDT-------------TARFRPTLVRFLDGKQV 246
Query: 147 --VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
V G HTLA L+ G N++ QL +G V+ T ++
Sbjct: 247 CHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEADSVAAPTEIT 292
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGW 93
A G D + + G V++WG G RGQLG + PR ++ L V+ ++ G
Sbjct: 91 AVGLDFSVVVDSTGKVYTWGGGERGQLGLGREAMETGSRVPRPVKGLGNAFVISVACGTR 150
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H A T+DG +++WG GQ+G +G+ + H P ++ D + VV VA GS +
Sbjct: 151 HCLALTRDGRVFSWGEGADGQLG-DGQF-VSRHSPEVIA-----DLRGKGVVSVAAGSTY 203
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
+LA+ + ++ G N QL +G
Sbjct: 204 SLAVTGADQVYAFGSNSKGQLGVG 227
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/156 (32%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD---ANMEPRE-IRALSGLGVVQIS 89
+A G+ H LA+T+ G V++ G R QLG SG + A + P E I A++G +
Sbjct: 40 VATGYYHSLAITRSGTVYTTGKNDRRQLG--RSGDEHKWARVTPLETITAVAG------A 91
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S G +Y WG GQ+G+ ++ P P+ N V+ VA
Sbjct: 92 VGLDFSVVVDSTGKVYTWGGGERGQLGLGREAMETGSRVPRPVK-----GLGNAFVISVA 146
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
CG+RH LAL D ++ G QL G VS+ S
Sbjct: 147 CGTRHCLALTRDGRVFSWGEGADGQLGDGQFVSRHS 182
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 3964 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4021
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4022 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4079
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
Q +VVD+ACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 4080 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 4134
Query: 185 VMTRLSV 191
+T L V
Sbjct: 4135 SLTGLGV 4141
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4128 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4185
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4186 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4239
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4240 -LQGKKVNRVACGSAHTLA 4257
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2973 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3030
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3031 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3086
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3087 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3133
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 616
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRG 640
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3135 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3192
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3193 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3245
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3246 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3290
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3019 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3078
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3079 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3126
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3127 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3186
Query: 179 GVSQ 182
+ Q
Sbjct: 3187 NIPQ 3190
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4087 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4144
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4145 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4197
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4198 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4226
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3083 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3140
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3141 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3195
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3196 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3236
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3187 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3243
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3244 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3298
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3299 LEGQ--KITRVACGSSHSVA 3316
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 758
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 759 DTKHI--VGIACGPAQSFA 775
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 610
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQ 687
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4024 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4081
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4082 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4133
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4134 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4174
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 489
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 490 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 545
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 546 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 586
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG H LAL+ +G +FSWG GS GQLG ++ DA PR I+ L+ ++Q+S
Sbjct: 86 IVHVACGESHSLALSDQGQLFSWGAGSDGQLGL-TTIEDAVTVPRLIKKLNQQTILQVSC 144
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G WH A DG + WG N+ GQ+G+ GK P S I + VA G
Sbjct: 145 GNWHCLALAADGQFFTWGQNSYGQLGL-GK-----ECPSQASPQRVKSLDGIPLAQVAAG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ AL +++G G N QL +
Sbjct: 199 GAHSFALSLSGAVFGWGKNSSGQLGL 224
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G+ +P +I AL+G +V
Sbjct: 33 DRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS----KPEQIGALAGQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVT-VPRLI---KKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N Y QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLG 172
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L + +P + + ++CG HCLAL +G F+WG S GQLG
Sbjct: 118 LTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGL-GKECP 176
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ P+ +++L G+ + Q++AGG HS A + G ++ WG N+ GQ+G+ + D
Sbjct: 177 SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDE-----RDRE 231
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ KVV ++CG HT L ++ G QL
Sbjct: 232 SPCHVKLLRSQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG S GQLG S P ++
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL--SDERDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG HTLA + + +GCG
Sbjct: 295 E---VSQIACGRHHTLAFVPSSGMIYAFGCG 322
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVSQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRHHTLAFVPSSGMIYAFGCGTRGQLGT 329
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 15/145 (10%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G S+ EP+ + V +++ GG HS +DG +Y G N
Sbjct: 4 WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G HD + +V VACG H+LAL D L+ G
Sbjct: 64 GQLG---------HDCEGSKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKN 197
QL + ++ ++VP +K
Sbjct: 115 QLGL------TTIEDAVTVPRLIKK 133
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 1615 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 1672
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 1673 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 1730
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 1731 EAL-----QGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 1773
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 1779 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 1836
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 1837 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 1890
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 1891 -LQGKKVNRVACGSAHTLA 1908
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 573 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 630
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 631 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 686
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 687 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 733
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 735 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 792
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 793 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 845
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ K+V VA G+ H LA+ D ++ G N++ Q G
Sbjct: 846 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 885
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 619 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 678
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
+PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 679 N--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------HG 727
Query: 128 PHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCG 179
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 728 DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 787
Query: 180 VSQ 182
+ Q
Sbjct: 788 IPQ 790
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 1738 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 1795
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 1796 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 1848
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 1849 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 1877
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 683 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 740
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 741 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 795
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 796 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 836
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 787 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 843
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 844 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 898
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 899 LEGQ--KITRVACGSSHSVA 916
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 1675 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 1732
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 1733 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 1784
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 1785 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 1825
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 1545 GTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 1602
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 1603 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 1657
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 1658 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 1697
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 3774 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 3831
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 3832 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 3889
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 3890 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3932
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 3938 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 3995
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 3996 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4049
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4050 -LQGKKVNRVACGSAHTLA 4067
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 29 LVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ I L L VV
Sbjct: 580 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVV 637
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y+WG + ++G G + H +P Q KV+D
Sbjct: 638 KVRCGSQFSIALTKDGQVYSWGKGDNQRLG-HGTEE---HVRYPKLLE---GLQGKKVID 690
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 691 VAAGSTHCLALTEDSEVHSWGSNDQCQ 717
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2732 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 2789
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 2790 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 2845
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 2846 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 2893
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 2894 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 2951
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 2952 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3004
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3005 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3049
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 2778 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 2837
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 2838 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 2885
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 2886 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 2945
Query: 179 GVSQ 182
+ Q
Sbjct: 2946 NIPQ 2949
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 3897 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 3954
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 3955 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4007
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4008 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4036
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG---- 84
V IA D H LAL G V+SWG G +LG+ T EP+ I A SG
Sbjct: 472 VVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGH--GDTVPLEEPKVISAFSGKQAGKH 529
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV I+ G +SAA T +G LY WG N G++G D + PM + + +KV
Sbjct: 530 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKV 582
Query: 145 VDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+DVACGS TLA+ ++ +W G +Y +L G
Sbjct: 583 IDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 617
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 2842 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 2899
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 2900 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 2954
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 2955 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2995
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 2946 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3002
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3003 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3057
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3058 LEGQ--KITRVACGSSHSVA 3075
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 530 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 587
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 588 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 640
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 641 CGSQFSIALTKDGQVYSWGKGDNQ 664
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 625 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 681
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 682 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 735
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 736 DTKHI--VGIACGPAQSSA 752
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 3834 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 3891
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 3892 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 3943
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 3944 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3984
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + +L VT IAC L + + G V + S + P+ ++
Sbjct: 419 PIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYNSD------------TLVPQLVQG 466
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ VV+I+A G H A G +Y+WG +G ++G + L +P +S
Sbjct: 467 LASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPL--EEPKVISAFSGK 524
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 525 QAGK-HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 563
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3704 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLLAVTADGKLYAT 3761
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 3762 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 3816
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 3817 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 3856
>gi|340721975|ref|XP_003399388.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like isoform 1
[Bombus terrestris]
Length = 534
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + DIACG H LALT EG V++WG + GQ+G S + N + L+G V+
Sbjct: 128 DEFIVDIACGSHHSLALTNEGKVYAWGENTCGQVG-KSVNINENTPMKVNSTLAGKTVIC 186
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
IS G S T G +Y WG N+ GQ+G+ ++ V DP ++ D + + +
Sbjct: 187 ISCGQSSSMTVTDTGKVYGWGCNDVGQLGIGNYVNQV--DPCEVTMLVD-----VVIKKI 239
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG H LAL + +L+ G N Y QL +G
Sbjct: 240 VCGYAHVLALSNKGALYVWGGNNYGQLGLG 269
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 81/145 (55%), Gaps = 10/145 (6%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RALSGLGVVQISAGGWHSAAR 98
H LALT+EG V+SWG+ S G+LG S+ +M P + + L+ +V I+ G HS A
Sbjct: 88 HVLALTEEGKVYSWGHNSHGELGNCSTN---HMIPMPVTKNLNDEFIVDIACGSHHSLAL 144
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T +G +YAWG N GQVG + +++ PM + + V+ ++CG ++ +
Sbjct: 145 TNEGKVYAWGENTCGQVGK----SVNINENTPMKVNSTLAGKT--VICISCGQSSSMTVT 198
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQV 183
D ++G G N+ QL +G V+QV
Sbjct: 199 DTGKVYGWGCNDVGQLGIGNYVNQV 223
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQISAG-GWHSA 96
+ L +T++ IV++ G+ + G LG +G N P+++ AL G + + G G H
Sbjct: 34 NEALIITRDKIVYALGSNTSGCLG---TGDACNTFYPKKVEALCGKNIKTFAYGKGPHVL 90
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
A T++G +Y+WG N+ G++G + + PM +++ + + I VD+ACGS H+LA
Sbjct: 91 ALTEEGKVYSWGHNSHGELG-----NCSTNHMIPMPVTKNLNDEFI--VDIACGSHHSLA 143
Query: 157 LCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
L ++ ++ G N Q+ +++ + M
Sbjct: 144 LTNEGKVYAWGENTCGQVGKSVNINENTPM 173
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQISAGG 92
I+CG + +T G V+ WG GQLG G N ++P E+ L + + +I G
Sbjct: 187 ISCGQSSSMTVTDTGKVYGWGCNDVGQLGI---GNYVNQVDPCEVTMLVDVVIKKIVCGY 243
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H A + G LY WG NN GQ+G+ K+++ +P+ ++ +V+DVA
Sbjct: 244 AHVLALSNKGALYVWGGNNYGQLGLGMKMNMC----NPVQLKQEMMG---RVLDVATSHY 296
Query: 153 H--TLALCDDNS--LWG 165
+ ++A+ + N +WG
Sbjct: 297 NHISIAMAEGNRIFMWG 313
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P + +D+V+ I CG+ H LAL+ +G ++ WG + GQLG G NM P +++
Sbjct: 225 PCEVTMLVDVVIKKIVCGYAHVLALSNKGALYVWGGNNYGQLGL---GMKMNMCNPVQLK 281
Query: 79 ALSGLGVVQISAGGWH--SAARTQDGFLYAWG 108
V+ ++ ++ S A + ++ WG
Sbjct: 282 QEMMGRVLDVATSHYNHISIAMAEGNRIFMWG 313
>gi|432108022|gb|ELK33009.1| Putative E3 ubiquitin-protein ligase HERC6 [Myotis davidii]
Length = 1098
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 13/129 (10%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVVQI 88
++CG H LAL+++G FSWG S GQLG +PS + P+ +R+L G+ + Q+
Sbjct: 69 QVSCGDHHSLALSEDGKAFSWGKNSHGQLGLGKDFPSQAS-----PQRVRSLEGIPLAQV 123
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+AGG HS A + G + WG N+ GQ+ + GK D+ V P+S +++ V+ ++
Sbjct: 124 AAGGAHSFALSLSGTSFGWGSNSAGQLALSGK-DIPVQSYKPLSVGR---LKSLDVIYIS 179
Query: 149 CGSRHTLAL 157
CG HT L
Sbjct: 180 CGYEHTAVL 188
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+G +Q+S G HS A ++DG ++WG N+ GQ+G+ P S + I
Sbjct: 65 VGTLQVSCGDHHSLALSEDGKAFSWGKNSHGQLGLGKDF------PSQASPQRVRSLEGI 118
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
+ VA G H+ AL + +G G N QL++ V LSV
Sbjct: 119 PLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGKDIPVQSYKPLSV 167
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD---ANMEPRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG D + +P
Sbjct: 109 PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLAL--SGKDIPVQSYKPLS 166
Query: 77 IRALSGLGVVQISAGGWHSAARTQ 100
+ L L V+ IS G H+A TQ
Sbjct: 167 VGRLKSLDVIYISCGYEHTAVLTQ 190
>gi|389583915|dbj|GAB66649.1| hypothetical protein PCYB_094330, partial [Plasmodium cynomolgi
strain B]
Length = 371
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 14 SQVFHMPSRMDHFL--DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
Q P +++ F D +I CG H L LT+ G V+ G G G+LG + G
Sbjct: 117 KQNLSTPKKVESFKSDDSEFVNICCGDQHSLVLTKNGKVYGCGRGEFGRLGKGNHGDQLF 176
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-DLVVHDPHP 130
E + + + V IS G SAA + DG +Y WG N+ GQ+G+E + DL H+ +P
Sbjct: 177 FEEIDFFISNNITVKGISCGHSFSAALSTDGEVYVWGRNDYGQLGIENSIGDLYSHEVYP 236
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
+ + FD +NIK+ +ACG H +A ++N ++
Sbjct: 237 -NKVKYFDMENIKIKFIACGDNHMIACSENNVIF 269
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-----SSGTDANME 73
MP ++ +F + + ++ G +H A +G +F++G +GQLG + +
Sbjct: 7 MPEKVPNFENAKIEKLSAGCNHA-AFIVDGKIFTYGLNDKGQLGRSIEEENDQNKNYTLT 65
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+E+ + + G H+ A + LY+WGW G G +
Sbjct: 66 PKEVITEGNVKFKDVCCGFKHTVAVDVNNNLYSWGWGGNFFKGANGLGHGNKQNLSTPKK 125
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E F S + + V++ CG +H+L L + ++GCG E+ +L G
Sbjct: 126 VESFKSDDSEFVNICCGDQHSLVLTKNGKVYGCGRGEFGRLGKG 169
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
VT++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L VV I
Sbjct: 154 VTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQAIPRRVTGCLQNKVVVNI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREI 77
P R+D D + ++ G H + T EG VFSWG+ + GQLG +GT + + P I
Sbjct: 89 PRRLDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLG---NGTINHGLVPSHI 145
Query: 78 RA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
LS V +++ G +HS T DG ++AWG+NN GQVG + + P ++
Sbjct: 146 STNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAI--PRRVTGC-- 201
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ D ++ G+N QL +G
Sbjct: 202 --LQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG P +
Sbjct: 194 IPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSTHTSA 323
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVV 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 95/187 (50%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + V +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 2241 TESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 2298
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR + +L G+ VV I+AGG HSA T G LY+WG G++G D + P +
Sbjct: 2299 DRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQL--KPKLV 2356
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
Q +V+D+ACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 2357 EAL-----QGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 2411
Query: 185 VMTRLSV 191
+T L V
Sbjct: 2412 SLTGLGV 2418
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 2405 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 2462
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 2463 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 2516
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 2517 -LQGKKINRVACGSAHTLA 2534
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P + L V D++CG LA+T+ G V+SWG+G G+LG G+D P+
Sbjct: 298 IPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKL 355
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I L L +V++ G S A T+DG +Y+WG + ++G G + H +P
Sbjct: 356 IEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG-HGTEE---HVRYPKLLE-- 409
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
Q KVVDVA GS H LAL +D+ + G N+ Q
Sbjct: 410 -GLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ 445
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G VFSWG G G+LG+ T EP+ I ALSG VV I+ G +S
Sbjct: 211 HYLALAATGEVFSWGCGDGGRLGH--GDTVPLEEPKMISALSGKQAGKHVVHIACGSTYS 268
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DV+CGS
Sbjct: 269 AAITAEGELYTWGRGNYGRLGHGSSEDQTI----PMLVT---GLKGLKVIDVSCGSGDAQ 321
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 322 TLAVTENGQVWSWGDGDYGKLGRG 345
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ + VV +A G H +ALT +G VFSWG G G+LG+ S
Sbjct: 1216 LGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRM 1275
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 1276 NCD---KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG---------H 1323
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 1324 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 1383
Query: 179 GVSQ 182
V Q
Sbjct: 1384 NVPQ 1387
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + L V +A G A+T EG V++ G + G+LG S + PR+
Sbjct: 1170 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPL-PRQ 1228
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 1229 ITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI--- 1283
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 1284 EALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQL 1330
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ V DIACG L LT + V+SWG+G G+LG G+D P +I
Sbjct: 2353 PKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKI 2410
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+GLGVV++ G S A T+ G +Y WG + ++G G D H +
Sbjct: 2411 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQ 2463
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q KV+ +A GS H + +D ++ G N+ QL G
Sbjct: 2464 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 2503
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL + + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 353 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 409
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G VV ++AG H A T+D +++WG N+ Q D L + P P S
Sbjct: 410 GLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRITKPQP-SALPGL 463
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
D+++I V +ACG + A W+ ++ S+G L VP V
Sbjct: 464 DTKHI--VGIACGPAQSFA-----------WSSCSEWSIG-----------LRVPFVVDV 499
Query: 198 CPIV 201
CP+
Sbjct: 500 CPMT 503
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ + T ++P+ ++
Sbjct: 1280 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 1337
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G V P + E
Sbjct: 1338 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNV--PQNI---ERL 1392
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ Q V + CG++ +LAL +W G ++ +L
Sbjct: 1393 NGQG--VCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS + P + L GL V+ +S
Sbjct: 258 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS--EDQTIPMLVTGLKGLKVIDVSC 315
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D +V V
Sbjct: 316 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----IVKVR 368
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 369 CGSQFSIALTKDGQVYSWGKGDNQ 392
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V+ S + P+ ++
Sbjct: 147 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYNSD------------TLGPQLVQG 194
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+++A G H A G +++WG +GG++ G D V + M +
Sbjct: 195 LASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRL---GHGDTVPLEEPKMISALSG 251
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
VV +ACGS ++ A+ + L+ G Y +L G Q M
Sbjct: 252 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 300
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 33/165 (20%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANM 72
++P ++ V I CG LALT+ G+V++WG G G+L S M
Sbjct: 1384 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDSHIVQSGNVSDRM 1443
Query: 73 EPREIRA----LSGLGVVQISAGGW-----------------HSAARTQDGFLYAWGWNN 111
R A L G+V GW R + +YAWG N+
Sbjct: 1444 RVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRERQLEVYAWGDND 1503
Query: 112 GGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
GQ G V P + + + Q K+ VACGS H++A
Sbjct: 1504 HGQQG--NGTTTVNRKP---TLVQGLEGQ--KITRVACGSSHSVA 1541
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 2171 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 2228
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E +K V V G +H LAL + ++ G
Sbjct: 2229 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWG 2283
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSV 215
E +L G S R V E ++ +V + A +SA ++V
Sbjct: 2284 EAEDGKLGHG----NRSPCDRPRVVESLRGIEVVDIAAGGAHSACITV 2327
>gi|27085405|gb|AAN85438.1| inositol 5-phosphatase 2 [Dictyostelium discoideum]
Length = 1800
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 89/177 (50%), Gaps = 19/177 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++CGF+H L LT E +FS G GQLG + A P + LS V++I A
Sbjct: 76 VVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSA--VPLPVDTLSKFNVIKIKA 133
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW---------SEDFDSQN 141
G SAA T+ G LY WG + GQ+G GK++ +H P + +D QN
Sbjct: 134 GNNVSAAITEAGDLYCWGSSAYGQLG-NGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQN 192
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG-CGVSQVSVMTRLSVPEHVKN 197
++ ++ G++HT+A+ +++ G N+Y QL +G C V VP H+ N
Sbjct: 193 LQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLV------PVPIHLDN 243
Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 37/196 (18%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP----------R 75
+ +L T+I G H +A++ G +FSWG+ GQLG +A + P R
Sbjct: 190 YQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGL--GHCNAKLVPVPIHLDNSFER 247
Query: 76 EIRALSGLG---------------VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
++ LG VV I+ G +HSA T +G L+ WG N GQ+G
Sbjct: 248 RAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDS 307
Query: 121 LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
LD V P + S +F +K+ +A G+ HT+ L + ++ G NE+ QL G
Sbjct: 308 LDQSV--PKTVKGSLEF----VKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHG--- 358
Query: 181 SQVSVMTRLSVPEHVK 196
+ RL P ++
Sbjct: 359 -SIGGKNRLYFPTQIQ 373
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN------- 71
+P +D V I G + A+T+ G ++ WG+ + GQLG +
Sbjct: 116 VPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTI 175
Query: 72 MEP------REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
+ P ++ L I G H+ A + G +++WG N GQ+G+ +V
Sbjct: 176 LNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLV 235
Query: 126 HDP------------HPMSWSE----DFDSQNIK--VVDVACGSRHTLALCDDNSLWGCG 167
P H S E DF ++ I VVD+ACG+ H+ L + L+ G
Sbjct: 236 PVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWG 295
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
N+Y QL G + Q SVP+ VK
Sbjct: 296 SNQYGQLGQGDSLDQ-------SVPKTVK 317
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ +G +FSWG GS GQLG + D+ PR I+
Sbjct: 75 PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTI-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + V G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q+ AGG HS A + G ++ WG NN GQ+G+ + D
Sbjct: 182 QRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-----KDRESPCHV 236
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CG HT L ++ G QL
Sbjct: 237 KLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGRNSHGQLGLG 172
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + + G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G + EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I V VACG H+LAL D L WG G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--VHVACGESHSLALSDQGQLFSWGAG 111
>gi|110740523|dbj|BAE98367.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
Length = 488
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG 84
L V IACG H +T G + ++G G GQ G S TD + P + +L G+
Sbjct: 307 RVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGS--TDDELSPTCVSSLLGIR 364
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
+ +++AG WH+ + DG +YA+G N GQ+G D P + E + +N+ V
Sbjct: 365 IEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGT--GCDQAETLPKLL---EAPNLENVNV 419
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE-HVKNCPIVKL 203
++CG+RHT + D+ ++ GWN+Y QL +G V+ R + E +K+C +
Sbjct: 420 KTISCGARHTAVITDEGRVFCWGWNKYGQLGIG------DVIDRNAPAEVRIKDCFPKNI 473
Query: 204 FAEHWNSARLSVP 216
W++ L P
Sbjct: 474 ACGWWHTLLLGQP 486
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIR 78
P+ + L + + ++A G H + +G V+++G GQLG +G D A P+ +
Sbjct: 354 PTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLG---TGCDQAETLPKLLE 410
Query: 79 A--LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
A L + V IS G H+A T +G ++ WGWN GQ+G+ +D + P + +
Sbjct: 411 APNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDR--NAPAEVRIKDC 468
Query: 137 FDSQNIKVVDVACGSRHTLAL 157
F ++ACG HTL L
Sbjct: 469 FPK------NIACGWWHTLLL 483
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 83/202 (41%), Gaps = 32/202 (15%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--------------- 63
+P + + + +A G H LAL+ G V+ WG G GQLG
Sbjct: 224 LPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPC 283
Query: 64 --PSSGTDANMEPREIRALSGLG------VVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
PSS A + ++ G V +I+ GG HSA T G L +GW GQ
Sbjct: 284 IEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQC 343
Query: 116 GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
G +G D + P S I++ +VA G HT D ++ G N++ QL
Sbjct: 344 G-QGSTD---DELSPTCVSSLL---GIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLG 396
Query: 176 MGCGVSQVSVMTRLSVPEHVKN 197
GC Q + +L +++N
Sbjct: 397 TGC--DQAETLPKLLEAPNLEN 416
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 20/132 (15%)
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
S D + P + G+ +V ++AGG H+ A + G ++ WG+ GQ+G+ ++ L
Sbjct: 216 SDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRL- 274
Query: 125 VHDPHPMSWSEDFDSQNIK-------------------VVDVACGSRHTLALCDDNSLWG 165
V PHP+ E V +ACG RH+ + D +L
Sbjct: 275 VSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLT 334
Query: 166 CGWNEYNQLSMG 177
GW Y Q G
Sbjct: 335 FGWGLYGQCGQG 346
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 93/188 (49%), Gaps = 18/188 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 3701 TESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 3758
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR + +L G VV I+AGG HSA T G LY WG G++G D + P +
Sbjct: 3759 DRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 3816
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
Q +VVDVACGS TL L DD+++W G +Y +L S GC V +V
Sbjct: 3817 EA-----LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVP 3871
Query: 185 VMTRLSVP 192
+ R+ P
Sbjct: 3872 LSLRVGRP 3879
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
L M S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 2730 LGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 2789
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
+PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 2790 N--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------HG 2838
Query: 128 PHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCG 179
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 2839 DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 2898
Query: 180 VSQ 182
V Q
Sbjct: 2899 VPQ 2901
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + L V +A G A+T EG V++ G + G+LG S + PR+
Sbjct: 2684 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPI-PRQ 2742
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 2743 VTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI--- 2797
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 2798 EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 2844
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 74/144 (51%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
LA+ D+ +W G +Y +L G
Sbjct: 618 PLAVTDNGQVWSWGDGDYGKLGRG 641
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 2846 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR--GGSEGCNVPQNI 2903
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 2904 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 2956
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 2957 GLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 3001
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 2794 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 2851
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G V P + E
Sbjct: 2852 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNV--PQNI---ERL 2906
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 2907 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2947
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
S+ ++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++
Sbjct: 2894 SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVR 2950
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P+ + L G +V ++ G H A T G +YAWG N+ GQ G V P +
Sbjct: 2951 KPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG--NGTTTVNRKP---T 3005
Query: 133 WSEDFDSQNIKVVDVACGSRHTLA 156
+ + Q K+ VACGS H++A
Sbjct: 3006 LVQGLEGQ--KITRVACGSSHSVA 3027
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G V+ ++AG H A T+D +++WG N+ Q D + S D
Sbjct: 706 ALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQ-----HFDTLHQTKPEPSLLPGLD 760
Query: 139 SQNIKVVDVACGSRHTLA 156
+++I V +ACG + A
Sbjct: 761 TKHI--VGIACGPAQSFA 776
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G A T +G +++WG + G++G G P + +D D VV V
Sbjct: 612 GSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 664
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CGS+ ++AL D ++ G + +L G
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 51/170 (30%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGY--------------------PSS-- 66
V D+ACG L LT + V+SWG+G G+LG PS+
Sbjct: 3824 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPP 3883
Query: 67 -------------------GTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYA 106
G+D ++ PR+++ L G V+ I+ G H T++G +Y
Sbjct: 3884 PSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYT 3943
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
WG N+ GQ+G +G + + P ++ Q KV VACGS HTLA
Sbjct: 3944 WGDNDEGQLG-DGTTN-AIQRPRLVAA-----LQGRKVNRVACGSAHTLA 3986
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 443 PIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3631 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3688
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++GV G V P + E I+ V V G +H LAL + ++ G
Sbjct: 3689 GYGAGGRLGVGGTES--VSAP---TLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWG 3743
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 3744 EAEDGKLGHG----NRSPCDRPRVVESLRGTEVVDIAAGGAHSA 3783
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 3967 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4024
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4025 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4082
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+D+ACGS TL L DD+++W G +Y +L G
Sbjct: 4083 EAL-----QGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4125
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4131 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4188
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4189 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4242
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4243 -LQGKKVNRVACGSAHTLA 4260
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + L V +A G A+T EG V+S G + G+LG S + PR+
Sbjct: 2924 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQ 2982
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 2983 ITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI--- 3037
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3038 EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3084
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L M S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 2970 LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3029
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3030 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3077
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3078 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3137
Query: 179 GVSQ 182
+ Q
Sbjct: 3138 NIPQ 3141
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 509
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 510 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 562
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 563 TLAVTENGQVWSWGDGDYGKLGRG 586
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3086 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3143
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3144 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3196
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3197 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3241
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4090 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4147
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4148 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4200
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4201 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4229
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3034 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3091
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3092 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3146
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3147 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3187
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3138 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3194
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3195 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3249
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3250 LEGQ--KITRVACGSSHSVA 3267
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 594 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 650
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 651 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPTALP-GL 704
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
D+++I V +ACG + A W+ ++ S+G L VP V
Sbjct: 705 DTKHI--VGIACGPAQSFA-----------WSSCSEWSIG-----------LRVPFVVDI 740
Query: 198 CPIV 201
CP+
Sbjct: 741 CPVT 744
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 499 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 556
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D V+ V
Sbjct: 557 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VIKVR 609
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 610 CGSQFSIALTKDGQVYSWGKGDNQ 633
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4027 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4084
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4085 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4136
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4137 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4177
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + L V +AC L L++ G V++ S + P+ ++
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD------------MLAPQLVQG 435
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 436 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 491
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 492 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 532
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3897 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3954
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 3955 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4009
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4010 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4049
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D V+ I+CG H LAL+ G V SWG+ GQLG+ + + P+ +R
Sbjct: 81 PLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQL-PKVVRQ 139
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VVQI+ G HS A T G LY+WG N GQ+GV DL H +P+ +
Sbjct: 140 LVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDL-THCNYPLRLTTLL-- 196
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + +ACG H+ + +++G G N QL +
Sbjct: 197 -GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 232
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDAN 71
++ +P + + V IACG +H LALT G ++SWG+ GQLG P T N
Sbjct: 128 KEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCN 187
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P + L G+ + I+ GG HS ++ G ++ WG NN GQ+G+ + + +P
Sbjct: 188 Y-PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE----TNRAYPT 242
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ + V VACG ++ L ++ ++ CG Y QL G G S ++ R+
Sbjct: 243 QLKT---LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL--GHGFSSNEMLPRM 295
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANMEPREI 77
PS++ D V +ACG H L LT G V++ G+ QLG+ P+ P I
Sbjct: 31 PSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGSNDHSQLGHDLPTK------RPLLI 84
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L ++QIS G HS A + G + +WG N+ GQ+G D M +
Sbjct: 85 PELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLG-------HATDKEIMQLPKVV 137
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
K VV +ACG+ H+LAL L+ G N Y QL GV+ +T + P
Sbjct: 138 RQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL----GVNSPKDLTHCNYP 189
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 19/145 (13%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P R+ L + + IACG +H +++ G VF WG + GQLG A P ++
Sbjct: 187 NYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQL 244
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L LGV ++ G S T +G ++ G GQ+G H S +E
Sbjct: 245 KTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG------------HGFSSNEML 292
Query: 138 DSQNIK-----VVDVACGSRHTLAL 157
++ + VACG+RHTLAL
Sbjct: 293 PRMVMELMGSTITQVACGNRHTLAL 317
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ L V +ACG + + LT EG VF+ G G+ GQLG+ S + M PR +
Sbjct: 241 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE--MLPRMVME 298
Query: 80 LSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVV 125
L G + Q++ G H+ A G +YA+G + GQ+G L++
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLML 345
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ S GQLG + + P +I V Q++ G H+ T +G +YA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGS 66
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ Q+G DL P + +D+ ++ ++CGSRH+LAL D + G N
Sbjct: 67 NDHSQLG----HDLPTKRPLLIPELQDY-----VIIQISCGSRHSLALSDWGQVLSWGDN 117
Query: 170 EYNQL 174
+ QL
Sbjct: 118 DCGQL 122
>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
Length = 1319
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 827 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 884
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 885 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 942
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
Q +VVD+ACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 943 E-----ALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 997
Query: 185 VMTRLSV 191
+T L V
Sbjct: 998 SLTGLGV 1004
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 991 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 1048
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 1049 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVA----- 1101
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 1102 ALQGKKVNRVACGSAHTLA 1120
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 950 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 1007
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G D H + Q KV+ +A
Sbjct: 1008 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGS-------DDHVRRPRQVQGLQGKKVIAIA 1060
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 1061 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 1089
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 58 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 115
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFL-----YAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
L+G GV QI G S A T+ G + YAWG N+ GQ G V P +
Sbjct: 116 ERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQG--NGTTTVNRKP---T 170
Query: 133 WSEDFDSQNIKVVDVACGSRHTLA 156
+ + Q K+ VACGS H++A
Sbjct: 171 LVQGLEGQ--KITRVACGSSHSVA 192
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 6 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 63
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 64 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 118
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWG---CGWNEYNQLSMGCGVSQVS 184
+ Q V + CG++ +LAL +W W + + G G + V+
Sbjct: 119 NGQG--VCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVN 166
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 887 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 944
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 945 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 996
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 997 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 1037
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+PR I AL + I+ G HSAA T G LY WG G++G H +
Sbjct: 5 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------HGDNTTQ 55
Query: 133 WSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCGVSQ 182
+ +V+ VACGSR TLAL D+ ++ G ++ +L S GC + Q
Sbjct: 56 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 113
Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGI-----VFSWGNGSRGQLGYPSSGT 68
S+ ++P ++ V I CG LALT+ G+ V++WG+ GQ G + T
Sbjct: 106 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQG--NGTT 163
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAA 97
N +P ++ L G + +++ G HS A
Sbjct: 164 TVNRKPTLVQGLEGQKITRVACGSSHSVA 192
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 757 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 814
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 815 GYGAGGRLGIGGTES--VSTPTLL---ESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 869
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 870 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 909
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4024 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4081
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4082 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4139
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+D+ACGS TL L DD+++W G +Y +L G
Sbjct: 4140 EAL-----QGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4245
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4246 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4299
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4300 -LQGKKVNRVACGSAHTLA 4317
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 29 LVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ I L L V+
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVI 661
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y+WG + ++G G + H +P Q KV+D
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLG-HGTEE---HVRYPKLLE---GLQGKKVID 714
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 715 VAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + L V +A G A+T EG V+S G + G+LG S + PR+
Sbjct: 2981 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQ 3039
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3040 ITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI--- 3094
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3095 EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L M S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3027 LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3086
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3087 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3134
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3135 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194
Query: 179 GVSQ 182
+ Q
Sbjct: 3195 NIPQ 3198
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3200
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3253
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3254 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3298
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4147 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4204
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4257
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4258 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3148
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3203
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3204 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3251
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3306
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3307 LEGQ--KITRVACGSSHSVA 3324
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPTALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D V+ V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VIKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQ 688
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4141
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4193
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4194 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + L V +AC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD------------MLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3954 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4012 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4066
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4067 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4106
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H + LT +G V++WG + GQ+G SG+ AN PR + + L VV I
Sbjct: 171 VIEVACGSHHSMVLTSDGEVYTWGYNNSGQVG---SGSTANQPIPRRVTSCLQNKVVVNI 227
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A ++G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 228 ACGQMCSMAVVENGEVYVWGYNGNGQLG----LGSSGNQPTPCRIAA---LQGIRVQRVA 280
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 281 CGCAHTLVLTDEGQIYAWGANSYGQLGTG 309
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T+EG V++WG+ + QLG + T+ + P ++
Sbjct: 106 PKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLG--NGTTNHGLVPCQVS 163
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L V++++ G HS T DG +Y WG+NN GQVG + P P +
Sbjct: 164 TNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS----TANQPIPRRVTSCL 219
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ ++ ++ G+N QL +G
Sbjct: 220 --QNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 257
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ + G V+ WG GQLG SSG P I
Sbjct: 211 IPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPT--PCRI 268
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + +P + + D
Sbjct: 269 AALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSN----QSYPTTVTVDK 324
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
D +V+++ AC S HT A
Sbjct: 325 D----RVIEIAACHSAHTSA 340
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG H L LT EG +++WG S GQLG +G +N
Sbjct: 265 PCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLG---TGNKSNQSYPTTVT 321
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ V++I+A SAA+TQ G +Y WG G V
Sbjct: 322 VDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSV 359
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 3934 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 3991
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 3992 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4049
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+D+ACGS TL L DD+++W G +Y +L G
Sbjct: 4050 EA-----LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4092
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4098 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4155
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4156 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4209
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4210 -LQGKKVNRVACGSAHTLA 4227
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 29 LVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ I L L V+
Sbjct: 514 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVI 571
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y+WG + ++G G + H +P Q KV+D
Sbjct: 572 KVRCGSQFSIALTKDGQVYSWGKGDNQRLG-HGTEE---HVRYPKLLE---GLQGKKVID 624
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
VA GS H L L +D+ + G N+ Q GV++
Sbjct: 625 VAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTK 660
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 417 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 474
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 475 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 527
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 528 TLAVTENGQVWSWGDGDYGKLGRG 551
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3053 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3110
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3111 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3163
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3164 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3208
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L M S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 2937 LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 2996
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I+AL + I+ G HSA T G LY WG G++G H
Sbjct: 2997 NCD---KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLG---------H 3044
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3045 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3104
Query: 179 GVSQ 182
+ Q
Sbjct: 3105 NIPQ 3108
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4057 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4114
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4115 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4167
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4168 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4196
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3105 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3161
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3162 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3216
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3217 LEGQ--KITRVACGSSHSVA 3234
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + L V +A G A+T EG V+S G + G+LG S + PR+
Sbjct: 2891 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQ 2949
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 2950 ITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI--- 3004
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+ ++ I+ D+A GS H+ L L+ G EY +L G +Q+
Sbjct: 3005 QALKTKRIR--DIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQL 3051
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 559 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 615
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H T+D +++WG N+ Q D L V P P ++
Sbjct: 616 GLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQ-----HFDTLGVTKPEPTAFP-GL 669
Query: 138 DSQNIKVVDVACGSRHTLA 156
DS++I V +ACG + A
Sbjct: 670 DSKHI--VGIACGPAQSFA 686
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 464 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 521
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D V+ V
Sbjct: 522 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VIKVR 574
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 575 CGSQFSIALTKDGQVYSWGKGDNQ 598
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIA G H LT G +++WG G G+LG+ + T ++P+ ++ L G V+Q++
Sbjct: 3012 IRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKVLLGHRVIQVAC 3069
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T +G +++WG + G++G G + P + E + Q V +
Sbjct: 3070 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERLNGQG--VCQIE 3122
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
CG++ +LAL +W G +Y +L G V
Sbjct: 3123 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3154
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 3994 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4051
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4052 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4103
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4104 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4144
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + L V +AC L L++ G V++ S + P+ ++
Sbjct: 353 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD------------MLAPQLVQG 400
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L +P +S
Sbjct: 401 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL--EEPKVISAFSGK 458
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 459 QAGK-HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 497
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3864 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3921
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 3922 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 3976
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 3977 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4016
>gi|15233306|ref|NP_191117.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|7076801|emb|CAB75916.1| Regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
gi|332645883|gb|AEE79404.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 488
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG 84
L V IACG H +T G + ++G G GQ G S TD + P + +L G+
Sbjct: 307 RVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGS--TDDELSPTCVSSLLGIR 364
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
+ +++AG WH+ + DG +YA+G N GQ+G D P + E + +N+ V
Sbjct: 365 IEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGT--GCDQAETLPKLL---EAPNLENVNV 419
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE-HVKNCPIVKL 203
++CG+RHT + D+ ++ GWN+Y QL +G V+ R + E +K+C +
Sbjct: 420 KTISCGARHTAVITDEGRVFCWGWNKYGQLGIG------DVIDRNAPAEVRIKDCFPKNI 473
Query: 204 FAEHWNSARLSVP 216
W++ L P
Sbjct: 474 ACGWWHTLLLGQP 486
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIR 78
P+ + L + + ++A G H + +G V+++G GQLG +G D A P+ +
Sbjct: 354 PTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLG---TGCDQAETLPKLLE 410
Query: 79 A--LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
A L + V IS G H+A T +G ++ WGWN GQ+G+ +D + P + +
Sbjct: 411 APNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDR--NAPAEVRIKDC 468
Query: 137 FDSQNIKVVDVACGSRHTLAL 157
F ++ACG HTL L
Sbjct: 469 FPK------NIACGWWHTLLL 483
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 83/202 (41%), Gaps = 32/202 (15%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--------------- 63
+P + + + +A G H LAL+ G V+ WG G GQLG
Sbjct: 224 LPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPC 283
Query: 64 --PSSGTDANMEPREIRALSGLG------VVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
PSS A + ++ G V +I+ GG HSA T G L +GW GQ
Sbjct: 284 IEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQC 343
Query: 116 GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
G +G D + P S I++ +VA G HT D ++ G N++ QL
Sbjct: 344 G-QGSTD---DELSPTCVSSLL---GIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLG 396
Query: 176 MGCGVSQVSVMTRLSVPEHVKN 197
GC Q + +L +++N
Sbjct: 397 TGC--DQAETLPKLLEAPNLEN 416
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 20/132 (15%)
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
S D + P + G+ +V ++AGG H+ A + G ++ WG+ GQ+G+ ++ L
Sbjct: 216 SDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRL- 274
Query: 125 VHDPHPMSWSEDFDSQNIK-------------------VVDVACGSRHTLALCDDNSLWG 165
V PHP+ E V +ACG RH+ + D +L
Sbjct: 275 VSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLT 334
Query: 166 CGWNEYNQLSMG 177
GW Y Q G
Sbjct: 335 FGWGLYGQCGQG 346
>gi|351542221|ref|NP_001082438.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI-RALSG 82
L V +ACG H +ALT +G VFSWG + GQ+G SGT AN PR++ +L
Sbjct: 194 ELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCGQVG---SGTTANQSVPRKVASSLQS 250
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
VV ISAG S A T +G +Y WG+N GQ+G+ + ++ P + ++ Q I
Sbjct: 251 KVVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLGNTGNQLM--PCRLVFA-----QPI 303
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ V G HTLAL D L+ G N + QL +G
Sbjct: 304 CIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIG 338
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 10/161 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
MP R+D + D++ G H L ++G V+SWG+ QLG + T P ++
Sbjct: 134 MPRRLDVLCGKKIVDLSYGSGPHILLCNEDGEVYSWGHNGYSQLG--NGNTIQGTTPVQV 191
Query: 78 -RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L V+Q++ G HS A T DG +++WG+NN GQVG + V P ++ S
Sbjct: 192 CMELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSV--PRKVASS-- 247
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q+ VV ++ G ++AL D+ ++G G+N QL +G
Sbjct: 248 --LQSKVVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLG 286
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG-G 92
C + + TQ VF +G LG + + + PR + L G +V +S G G
Sbjct: 97 FGCSANEAIYTTQNNEVFVFGMNISSCLG--TGDNQSTIMPRRLDVLCGKKIVDLSYGSG 154
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H +DG +Y+WG N Q+G + P+ + S+ KV+ VACGS
Sbjct: 155 PHILLCNEDGEVYSWGHNGYSQLGNGN----TIQGTTPVQVCMELLSK--KVIQVACGSH 208
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
H++AL D ++ G+N Q+ G +Q SVP V
Sbjct: 209 HSMALTSDGEVFSWGYNNCGQVGSGTTANQ-------SVPRKV 244
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV I+ G +ALT G V+ WG GQLG ++G + P + + ++Q+
Sbjct: 252 VVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLGNTGN--QLMPCRLVFAQPICIIQVV 309
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
G H+ A + G LYAWG N+ GQ+G+ K + V
Sbjct: 310 LGYAHTLALSDQGVLYAWGANSHGQLGIGNKSNQTV 345
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP R+ + + + G+ H LAL+ +G++++WG S GQLG G +N + ++
Sbjct: 293 MPCRLVFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGI---GNKSN-QTVPVK 348
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNG 112
+ +V+++A SAA++Q G +Y WG G
Sbjct: 349 VGTNERMVEVTACHSTNISAAKSQSGQVYMWGLCRG 384
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 92/172 (53%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4142 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4199
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4200 PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL--PEKVTA 4257
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + V VACG HTL + D + W G +Y +L +G ++ S
Sbjct: 4258 LEGY-----HVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSS 4304
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 476 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 533
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
++DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 534 SEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 576
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 577 SSHTIALSKDGRTVWSFGGGDNGKLGHG 604
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ + AL G+ + ++
Sbjct: 570 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVVEALQGMFIRKVC 627
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + +VVD++
Sbjct: 628 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELATTRVVDISI 679
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G H LAL DN ++ G N Q G
Sbjct: 680 GDSHCLALSHDNEVYAWGNNSMGQCGQG 707
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++ V +ACG +H L ++ +G+ V+++G+G G+LG +S A P+++
Sbjct: 4251 LPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4308
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG ++ +G D ++ P + + +
Sbjct: 4309 DVLCGIGIKKVACGTQFSVALTKDGKVFTFGQ------------DRLIGLPEGRARNHNR 4356
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q I + DVA G+ HTL L ++ G N QL +G
Sbjct: 4357 PQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLG 4401
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ V DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 663 PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVIG 721
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 722 LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 752
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A++++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 519 VVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 574
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 575 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVVEA-----LQGMFIRKVC 627
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
GS+ +LAL + WGCG +GCG S+ + + R + E + +V +
Sbjct: 628 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELATTRVVDI 677
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 610 YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 666
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ VV IS G H A + D +YAWG N+ GQ G +G + P +
Sbjct: 667 EELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKV-----I 720
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + ++ G+ H+LA
Sbjct: 721 GLDGVAIQQISAGTSHSLA 739
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 79/149 (53%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H + LT +G V++WG + GQ+G SG+ AN PR + + L VV I
Sbjct: 170 VIEVACGSHHSMVLTSDGEVYTWGYNNSGQVG---SGSTANQPIPRRVTSCLQNKVVVNI 226
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A ++G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 227 ACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGN----QPTPCRIAA---LQGIRVQRVA 279
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 280 CGCAHTLVLTDEGQIYAWGANSYGQLGTG 308
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T+EG V++WG+ + QLG + T+ + P ++
Sbjct: 105 PKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLG--NGTTNHGLVPCQVS 162
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L V++++ G HS T DG +Y WG+NN GQVG + P P +
Sbjct: 163 TNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS----TANQPIPRRVTSCL 218
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ ++ ++ G+N QL +G
Sbjct: 219 --QNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 256
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ + G V+ WG GQLG SSG P I
Sbjct: 210 IPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPT--PCRI 267
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + +P + + D
Sbjct: 268 AALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSN----QSYPTTVTVDK 323
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
D +VV++ AC S HT A
Sbjct: 324 D----RVVEIAACHSAHTSA 339
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG H L LT EG +++WG S GQLG +G +N
Sbjct: 264 PCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLG---TGNKSNQSYPTTVT 320
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ VV+I+A SAA+TQ G +Y WG G V
Sbjct: 321 VDKDRVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSV 358
>gi|403352920|gb|EJY75989.1| Kinesin motor domain containing protein [Oxytricha trifallax]
Length = 1386
Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG 91
T ++CG+ H A+T +G++ SWG G GQLG+ T+ P I AL + ++Q+S G
Sbjct: 969 TQLSCGYHHSAAVTSDGMILSWGRGIFGQLGH--GDTENYSLPTPIEALVKIQIIQVSCG 1026
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
HS A + G +++WG+ GQ+G D ++ P + + F +I V +ACG
Sbjct: 1027 WQHSMALSSQGRIFSWGYGEDGQLGHGDTNDYLL--PKEIDF---FRKNSINVGMIACGH 1081
Query: 152 RHTLALCDDNS----LWGC 166
H+ + D S LWGC
Sbjct: 1082 SHSGCITDGQSSQLYLWGC 1100
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++ + +P+ ++ + + + ++CG+ H +AL+ +G +FSWG G GQLG+ T+ +
Sbjct: 1003 TENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQGRIFSWGYGEDGQLGH--GDTNDYLL 1060
Query: 74 PREIRAL--SGLGVVQISAGGWHSAART--QDGFLYAWGWNNGGQVGVE 118
P+EI + + V I+ G HS T Q LY WG N ++ +E
Sbjct: 1061 PKEIDFFRKNSINVGMIACGHSHSGCITDGQSSQLYLWGCNPDCRLMIE 1109
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
VF WG+G G+ G +G +++ E +A + Q+S G HSAA T DG + +WG
Sbjct: 937 VFVWGSGKDGRCG---NGKESS-EKLPNQANTSHNFTQLSCGYHHSAAVTSDGMILSWGR 992
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G + + P P+ I+++ V+CG +H++AL ++ G+
Sbjct: 993 GIFGQLGHGDTENYSL--PTPIE-----ALVKIQIIQVSCGWQHSMALSSQGRIFSWGYG 1045
Query: 170 EYNQLSMG 177
E QL G
Sbjct: 1046 EDGQLGHG 1053
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 33/153 (21%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----------------------YPSS-- 66
T ++CG + L + V+++G S G+LG Y S+
Sbjct: 1234 TQVSCGDAFTIVLNERNEVYAFGKLSHGRLGVGNGQNLNQQKTNQLKQSIQNQTYQSTEG 1293
Query: 67 GTDANMEPREIRALS-GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLV 124
D EP+ +++LS VVQISAG H+A T G LYAWG+N Q+G+ + + D
Sbjct: 1294 SNDCIAEPQLLQSLSQSEKVVQISAGCRHAACVTDSGKLYAWGFNFYEQLGLGDSEKDFD 1353
Query: 125 VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
V P S+ S +K V+CG HT AL
Sbjct: 1354 V----PTKVSKGLQSSKVKF--VSCGYFHTGAL 1380
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRA-LSGLGVVQI 88
VT++ACG H L LT +G VF+WG + GQ+G SG+ AN + PR + L VV I
Sbjct: 83 VTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQLIPRRVTGCLQNKVVVNI 139
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 140 ACGQMCSMAVVNTGEVYVWGYNGNGQLG----LGSSGNQPTPCRIAA---LQGIRVQRVA 192
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 193 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 221
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H + T EG VF+WG+ + QLG + T+ + P I LS V +++ G +HS
Sbjct: 39 HIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVL 96
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG ++AWG+NN GQVG + ++ P ++ QN VV++ACG ++A+
Sbjct: 97 TSDGEVFAWGYNNSGQVGSGSTANQLI--PRRVTGCL----QNKVVVNIACGQMCSMAVV 150
Query: 159 DDNSLWGCGWNEYNQLSMG 177
+ ++ G+N QL +G
Sbjct: 151 NTGEVYVWGYNGNGQLGLG 169
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG P I
Sbjct: 123 IPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPT--PCRI 180
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 181 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PAPVVVEKD- 237
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 238 -----RIIEIAACHSAHTSA 252
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 177 PCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPAPVV 233
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 234 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 271
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 69 DANMEPREIRALSGLGVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
+ +EPR + +L+G + +S G G H T +G ++ WG N Q+G G + H
Sbjct: 13 QSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HG 68
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
P S + N +V +VACGS H+L L D ++ G+N Q+ G +Q+
Sbjct: 69 LVPCHISTNLS--NKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQL---- 122
Query: 188 RLSVPEHVKNC 198
+P V C
Sbjct: 123 ---IPRRVTGC 130
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 89/163 (54%), Gaps = 13/163 (7%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ ++ + + +A G HCLAL+ EG V+SWG G G+LG+ + T P+
Sbjct: 3969 VPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYD--RPKL 4026
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL G +V I+ GG HSAA + G+LY WG G++G D + P ++ +
Sbjct: 4027 IEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQL--KPTVVTALQG 4084
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ KV+DVACGS TL + DD+++W G +Y +L G
Sbjct: 4085 Y-----KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4122
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P +++ L V + CG +ALT+ G V++WG G +LG+ GTD ++ PR++
Sbjct: 4129 VPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGH---GTDDHVRRPRKV 4185
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G +V I+ G H A + G +Y WG N+ GQ+G D H
Sbjct: 4186 SALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLG-----DGTTHAQQSPRLVHAL 4240
Query: 138 DSQNIKVVDVACGSRHTLA 156
+NI VACGS HTLA
Sbjct: 4241 QGKNI--TRVACGSAHTLA 4257
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+ G +++WG G G+LG+ T +++P+ + A
Sbjct: 3052 PRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGH--GDTTTHLKPKLVDA 3109
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T+DG +Y+WG + G++G G + P P+
Sbjct: 3110 LVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGGSDG--CYSPLPV------ 3161
Query: 138 DSQN-IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D N + VV V CG++ +LAL +W G +Y +L G
Sbjct: 3162 DRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3202
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L +T + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4087 VIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLG--RGGSDGCKVPMKIESLAGLGVVKV 4144
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G D V P +S Q K+V +A
Sbjct: 4145 ECGSQFSVALTRSGAVYTWGKGDYHRLG--HGTDDHVRRPRKVS-----ALQGKKIVSIA 4197
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
GS H +A D ++ G N+ QL G +Q S
Sbjct: 4198 TGSLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQQS 4233
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +D + V +ACG +ALT++G V+SWG+G G+LG G+D P +
Sbjct: 3104 PKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLG--RGGSDGCYSPLPV 3161
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+GLGVVQ+ G S A T+ G ++ WG + ++G G +D H +
Sbjct: 3162 DRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLG-HG------NDHHVRRPTLVE 3214
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
+ KVV VA G+ H LA+ D ++ G N++ Q
Sbjct: 3215 GLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3250
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPR 75
+P + L IA G ++QEG +++ G G+ G+LG G + N+ EP+
Sbjct: 2943 IKLPVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGL---GDNNNVGEPK 2999
Query: 76 EIRALSG--LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
I LS + V + +GG H+ A TQDG +++WG G++G ++ L P +
Sbjct: 3000 PIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSL--DKPRLI-- 3055
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E S+ I+ D+ACGS H+ A+ + L+ G EY +L G
Sbjct: 3056 -EALKSKRIR--DIACGSGHSAAIASNGELYTWGLGEYGRLGHG 3096
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
+ P +D L V + CG LALT+ G V++WG G +LG+ G D ++ P
Sbjct: 3156 YSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGH---GNDHHVRRPTL 3212
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G VV ++ G H A T G +YAWG N+ GQ G +V P + ED
Sbjct: 3213 VEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG--NGSTMVNRKPSLVHNLED 3270
Query: 137 FDSQNIKVVDVACGSRHTLA--LCDDNSL 163
KV VACGS H++A L D +L
Sbjct: 3271 -----AKVNRVACGSSHSIAWVLTDQPTL 3294
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
+ P ++ L + DIACG H A++ G +++WG G G+LG+ S D ++P
Sbjct: 4020 TYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDS--DDQLKPT 4077
Query: 76 EIRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+ AL G V+ ++ +G + T D +++WG + G++G G V PM
Sbjct: 4078 VVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV----PMKI 4133
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4134 E---SLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4174
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 18 HMPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P + F D VV IA D H LALT +GIV+SWGNG G+LG+ S + EP+
Sbjct: 489 QYPQSVYGFADDVV-QIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCD--EPQ 545
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I LS V I+ G +SAA + G L WG + G++G G D +S
Sbjct: 546 VIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLG-HGICD-------DISIPT 597
Query: 136 DFDSQN-IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
+ N V VACGS + LC NS W + + +G G S S + + + +
Sbjct: 598 VVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPK--IVDK 655
Query: 195 VKNCPIVKLFAEHWNSARLS 214
+ + +VK+F SA L+
Sbjct: 656 LLDQNVVKVFCGGQFSAALT 675
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P +D LD V + CG ALT G V++WG G +LG+ G + ++ P+ +
Sbjct: 649 LPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGH---GNEEHVRFPKLV 705
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
L V +S G H A T+D +Y WG N+ Q ++ L VV +P
Sbjct: 706 EGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQ--IDPSLGAVVSEP 754
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D VT IACG + A++ G + +WG GS G+LG+ D P + A
Sbjct: 544 PQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGH--GICDDISIPTVVTA 601
Query: 80 LSGLGVVQISAGGWHSAAR--TQDGFLYAWGWNNGGQVGVEG----KLDLVVHDPHPMSW 133
L+G V ++ G S T G +++WG + G++G G KL +V
Sbjct: 602 LNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIV-------- 653
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ QN VV V CG + + AL ++ G ++ +L G
Sbjct: 654 -DKLLDQN--VVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHG 694
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P +LS L +Q++ G A T DG +YA
Sbjct: 3894 GAIYGWGHNHRGQLG-GLEGAKVKL-PLPCESLSALRPIQLAGGEQTLFAVTADGKVYAT 3951
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ G++G G ++V + E IK V V G +H LAL + ++ G
Sbjct: 3952 GYGALGRLGTGGVDSVMVP-----TLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWG 4006
Query: 168 WNEYNQLSMGCGVS 181
+ +L G ++
Sbjct: 4007 EGDDGKLGHGNRIT 4020
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
Q V+ WG + QLG G+ + P LS L + I+ G +Q+G LY
Sbjct: 2920 QNAAVYVWGLNDKDQLG-GLKGSKIKL-PVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLY 2977
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
A G G++G+ + V +P P+ + + IK V V G +H LAL D ++
Sbjct: 2978 ACGEGTNGRLGLGDNNN--VGEPKPIPFLSQY---IIKKVAVHSGGKHALALTQDGKVFS 3032
Query: 166 CGWNEYNQLSMGCGVS 181
G E +L G VS
Sbjct: 3033 WGEGEDGKLGHGNRVS 3048
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 40/184 (21%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP D ++ V + C L L+ G V+ GS Q YP S
Sbjct: 448 MPFYCDAIAEIGVKQLCCTERALLILSLSGKVYMMYYGSETQ--YPQS------------ 493
Query: 79 ALSGLG--VVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ G VVQI++ G H A T G +Y+WG +GG++G H S+S
Sbjct: 494 -VYGFADDVVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLG------------HGDSFS 540
Query: 135 EDFDSQNIKVVD------VACGSRHTLALCDDNSLWGCGWNEYNQLSMGC--GVSQVSVM 186
D + Q I+V+ +ACGS ++ A+ L G Y +L G +S +V+
Sbjct: 541 CD-EPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVV 599
Query: 187 TRLS 190
T L+
Sbjct: 600 TALN 603
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4024 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4081
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4082 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4139
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+D+ACGS TL L DD+++W G +Y +L G
Sbjct: 4140 EA-----LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4245
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4246 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4299
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4300 -LQGKKVNRVACGSAHTLA 4317
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 29 LVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ I L L V+
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVI 661
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y+WG + ++G G + H +P Q KV+D
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLG-HGTEE---HVRYPKLLE---GLQGKKVID 714
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
VA GS H L L +D+ + G N+ Q GV++
Sbjct: 715 VAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTK 750
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3200
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3253
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3254 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3298
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L M S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3027 LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3086
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I+AL + I+ G HSA T G LY WG G++G H
Sbjct: 3087 NCD---KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLG---------H 3134
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3135 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194
Query: 179 GVSQ 182
+ Q
Sbjct: 3195 NIPQ 3198
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4147 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4204
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4257
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4258 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3251
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3306
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3307 LEGQ--KITRVACGSSHSVA 3324
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H T+D +++WG N+ Q D L V P P ++
Sbjct: 706 GLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQ-----HFDTLGVTKPEPTAFP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
DS++I V +ACG + A
Sbjct: 760 DSKHI--VGIACGPAQSFA 776
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + L V +A G A+T EG V+S G + G+LG S + PR+
Sbjct: 2981 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQ 3039
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3040 ITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI--- 3094
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+ ++ I+ D+A GS H+ L L+ G EY +L G +Q+
Sbjct: 3095 QALKTKRIR--DIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D V+ V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VIKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQ 688
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIA G H LT G +++WG G G+LG+ + T ++P+ ++ L G V+Q++
Sbjct: 3102 IRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKVLLGHRVIQVAC 3159
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T +G +++WG + G++G G + P + E + Q V +
Sbjct: 3160 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERLNGQG--VCQIE 3212
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
CG++ +LAL +W G +Y +L G V
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4141
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4193
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4194 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + L V +AC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD------------MLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L +P +S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL--EEPKVISAFSGK 548
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 549 QAGK-HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3954 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4012 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4066
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4067 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4106
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 11/156 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P + DL + DIA G H ALT EG V+ WG G G+LG+ + + M
Sbjct: 233 TQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHD 127
P+++ L+G ++Q+S GG HS A T+DG ++++G + G++G K L+L +
Sbjct: 293 PQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIDI 352
Query: 128 PHPMSW----SEDFDSQNIKVVDVACGSRHTLALCD 159
P P+ +++ D VACG RHTLA+ +
Sbjct: 353 P-PLEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 13/174 (7%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G +K +S +P R+ ++ + IA G H LAL ++G +++WGN GQLG +
Sbjct: 181 GDIKQIS----IPVRVQGLENVRL--IAVGAFHNLALKEDGTLWAWGNNEYGQLG--TGD 232
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
T P ++ L L +V I+AGGWHS A T +G +Y WG G++G
Sbjct: 233 TQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
P ++ D ++ V+CG H++AL D ++ G ++ +L G V+
Sbjct: 293 PQKVNLLAGED-----IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVT 341
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 101/244 (41%), Gaps = 53/244 (21%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ S ++ V + G + LA+ +G +F+WG RG LG+P T P +
Sbjct: 27 ELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPE-TKTESTPSLV 85
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD--------------- 122
++L+ + +VQ + GGWH A G YAWG N GQ G E D
Sbjct: 86 KSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKR 145
Query: 123 ------------------LVVHDPHPMSWSEDFDSQNIKVVD-------------VACGS 151
++ + + +W + + +IK + +A G+
Sbjct: 146 CAPQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISIPVRVQGLENVRLIAVGA 205
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP-EHVKNCPIVKLFAEHWNS 210
H LAL +D +LW G NEY QL G G +Q +P + + + +V + A W+S
Sbjct: 206 FHNLALKEDGTLWAWGNNEYGQL--GTGDTQPR---SFPIPVQGLDDLTLVDIAAGGWHS 260
Query: 211 ARLS 214
L+
Sbjct: 261 TALT 264
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 57/128 (44%), Gaps = 16/128 (12%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
V +WG+G GQLG GTD E + AL V + G +S A DG L+ WG
Sbjct: 7 VIAWGSGEDGQLGL---GTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWG 63
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ---NIKVVDVACGSRHTLALCDDNSLWG 165
WN G +G H P + S + ++K+V A G H LA+ D +
Sbjct: 64 WNQRGTLG---------HPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYA 114
Query: 166 CGWNEYNQ 173
G NEY Q
Sbjct: 115 WGGNEYGQ 122
>gi|255074379|ref|XP_002500864.1| predicted protein [Micromonas sp. RCC299]
gi|226516127|gb|ACO62122.1| predicted protein [Micromonas sp. RCC299]
Length = 265
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D+V+ +A G H + ++ G VF+ G G GQLG+ + + PR + L+G+ VV
Sbjct: 84 DVVIVGVAAGARHSVMVSATGDVFTVGWGLYGQLGHEDA--EDLFAPRRVEHLAGITVVS 141
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++AG H+A T+DG LYAWG N G++G E D V V
Sbjct: 142 VAAGSAHTACVTRDGALYAWGSNRKGELGTA--------TGDVTKARESNDGAGSLAVAV 193
Query: 148 ACGSRHTLALCD----DNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
ACGS HT+AL + L+G GWN QL +G + + R+ +P + K + KL
Sbjct: 194 ACGSSHTVALARLESGEAGLFGFGWNNMGQLGLGDDKDR-GIPARIPLPANEKG-KVTKL 251
Query: 204 FAEHWNS 210
W++
Sbjct: 252 RCGWWHT 258
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 100/250 (40%), Gaps = 61/250 (24%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VV 86
V +A G H LAL+ +G VF+WG+ GQLG + P ++ S LG +V
Sbjct: 34 VVAVAAGERHSLALSAKGTVFAWGDNHTGQLGLGGE----DPLPMDVPTTS-LGRDVVIV 88
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++AG HS + G ++ GW GQ+G E DL P + I VV
Sbjct: 89 GVAAGARHSVMVSATGDVFTVGWGLYGQLGHEDAEDLFA--PRRVE-----HLAGITVVS 141
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL----------------------SMGCGVSQVS 184
VA GS HT + D +L+ G N +L ++ CG S
Sbjct: 142 VAAGSAHTACVTRDGALYAWGSNRKGELGTATGDVTKARESNDGAGSLAVAVACGSSHTV 201
Query: 185 VMTRLSVPEHVKNCPIVKLFAEHWNS---------------ARLSVPEHAKDSSIVKLFA 229
+ RL E LF WN+ AR+ +P + K + KL
Sbjct: 202 ALARLESGE-------AGLFGFGWNNMGQLGLGDDKDRGIPARIPLPANEK-GKVTKLRC 253
Query: 230 GHWNSGILVQ 239
G W++ + V+
Sbjct: 254 GWWHTVVGVE 263
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++ P R++H + V +A G H +T++G +++WG+ +G+LG + T +
Sbjct: 122 AEDLFAPRRVEHLAGITVVSVAAGSAHTACVTRDGALYAWGSNRKGELG---TATGDVTK 178
Query: 74 PREIRALSGLGVVQISAGGWHSAA----RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
RE +G V ++ G H+ A + + L+ +GWNN GQ+G+ D +
Sbjct: 179 ARESNDGAGSLAVAVACGSSHTVALARLESGEAGLFGFGWNNMGQLGLGDDKDRGIPARI 238
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTL 155
P+ +E KV + CG HT+
Sbjct: 239 PLPANEKG-----KVTKLRCGWWHTV 259
>gi|356539897|ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 480
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 16/174 (9%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
LA G + Q F +P + IACG H +T G V ++G G GQ G
Sbjct: 286 LARGSMSSDGQNFRVPGSY-------IKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQG 338
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
S TD + P + +L G+ + ++AG WH+ + DG +YA+G N GQ+G G D
Sbjct: 339 S--TDDELSPNCVSSLLGIRIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGG--DQA 394
Query: 125 VHDPHPMSWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P + D S +N+ V ++CG+RHT + D+ ++ GWN+Y QL +G
Sbjct: 395 ETIPRLL----DCPSLENVNVKRISCGARHTALITDNGKVFCWGWNKYGQLGLG 444
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR--EI 77
P+ + L + + +A G H + + +G V+++G GQLG + G A PR +
Sbjct: 346 PNCVSSLLGIRIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLG--TGGDQAETIPRLLDC 403
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L + V +IS G H+A T +G ++ WGWN GQ+G+ +D + +
Sbjct: 404 PSLENVNVKRISCGARHTALITDNGKVFCWGWNKYGQLGLGDVIDRNI--------PSEV 455
Query: 138 DSQNIKVVDVACGSRHTLALCD 159
+ +VACG HTL L +
Sbjct: 456 TIEGCVAKNVACGWWHTLLLAE 477
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 23/118 (19%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM------SWSE 135
G+ + ++AGG H+ A + G ++ WG+ GQ+G+ ++ + V PH + S+ +
Sbjct: 222 GVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-VSSPHLVPCINSSSYGK 280
Query: 136 DF-----------DSQNIKV-----VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D D QN +V +ACG RH+ + D ++ GW Y Q G
Sbjct: 281 DISASLARGSMSSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQG 338
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 28/195 (14%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWG---NGSRGQ 60
++ SG + + F +P+ ++ + A G+ HC+++T G V++WG G+
Sbjct: 85 YVTSGKHGEIPEPFPLPT------EVTIVKAAAGWAHCVSVTDCGEVYTWGWRECVPSGK 138
Query: 61 LGYPSSGTDANMEPREIRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
+ + S T + E S Q+S + G S T G +G +
Sbjct: 139 V-FGESLTGVSPEKDVPGRQSSFLTEQVSPRSQGSKSTGGTASG-------TSGEESSKR 190
Query: 119 GKLDLVVHDPHPMSWSEDFDSQ---------NIKVVDVACGSRHTLALCDDNSLWGCGWN 169
++ S S+D + +++ VA G RHTLAL D +WG G+
Sbjct: 191 RRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYG 250
Query: 170 EYNQLSMGCGVSQVS 184
QL +G + VS
Sbjct: 251 GEGQLGLGSRIRMVS 265
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 95/187 (50%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4027 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4084
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV I+AGG HSA T G L+ WG G++G D + P +
Sbjct: 4085 DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLV 4142
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
+ + +V+D+ACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 4143 EALQGY-----RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 4197
Query: 185 VMTRLSV 191
+T L V
Sbjct: 4198 SLTDLGV 4204
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D DL V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4191 KVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4248
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4249 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4302
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4303 -LQGKKINRVACGSAHTLA 4320
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 77/144 (53%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL+ G VFSWG G G+LG+ T EP+ I ALSG VV I+ G +S
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGH--GDTVPLEEPKLISALSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DV+CGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDQTI----PMLVT---GLKGLKVIDVSCGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ + VV +A G H +ALT +G +FSWG G G+LG+ S
Sbjct: 3030 LGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRM 3089
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3090 NCD---KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG---------H 3137
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3138 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3197
Query: 179 GVSQ 182
+ Q
Sbjct: 3198 NIPQ 3201
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2984 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3041
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3042 QITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3097
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3098 -EALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLK 3145
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 29 LVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D++CG LA+T+ G V+SWG+G G+LG G+D P+ I L L +V
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDIV 661
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y WG + ++G G + H +P E + KV+D
Sbjct: 662 KVRCGSQFSIALTKDGQVYTWGKGDNQRLG-HGTEE---HVRYP-KLLEGLKGK--KVID 714
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 715 VAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3203
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G D+ V P +
Sbjct: 3204 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG--HGTDVHVRKPQVVE----- 3256
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3257 GLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVN 3301
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++ +P+
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVRKPQV 3254
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3255 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3309
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3310 LEGQ--KITRVACGSSHSVA 3327
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3094 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3151
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3152 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3206
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3207 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3247
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ V DIACG L LT + V+SWG+G G+LG G+D P +I
Sbjct: 4139 PKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKI 4196
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+ LGVV++ G S A T+ G +Y WG + ++G G D H +
Sbjct: 4197 DSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQ 4249
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q KV+ +A GS H + +D ++ G N+ QL G
Sbjct: 4250 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4289
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS + P + L GL V+ +S
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS--EDQTIPMLVTGLKGLKVIDVSC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D +V V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----IVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYTWGKGDNQ 688
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL + + CG +ALT++G V++WG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L + P P +
Sbjct: 706 GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRITKPEPAALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V DIA G H +T G +F+WG G G+LG+ S + ++P+ + A
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDS--EDQLKPKLVEA 4144
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMKIDSLT 4200
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4201 D---LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4237
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L V IAC L L++ G V++ S + P+ +++
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSD------------TLGPQLVQS 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A + +G +++WG +GG++G + L +P +S +
Sbjct: 491 LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL--EEPKLIS-ALSG 547
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
VV +ACGS ++ A+ + L+ G Y +L G Q M
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3957 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4015 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4069
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4070 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDIAAGGAHSA 4109
>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
latipes]
Length = 527
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRA-LSGLGVVQI 88
VT++ACG H +ALT +G VF+WG + GQ+G SG+ AN PR + + L VV +
Sbjct: 130 VTEVACGSHHTIALTADGEVFAWGYNNSGQVG---SGSTANQPTPRRVSSCLQSKVVVNV 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A +G +Y WG+N GQ+G+ ++ + + Q + VV VA
Sbjct: 187 GCGQLCSMAVLDNGEIYGWGYNCNGQLGLG-------NNGNQQTPCRIAALQGVNVVQVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTLAL D+ ++ G N Y QL G
Sbjct: 240 CGYAHTLALTDEGFVYAWGANSYGQLGTG 268
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T +G VF+WG+ QLG + T+ + P +
Sbjct: 65 PRRIDVLCGKKIVSLSYGTGPHVVIATADGEVFAWGHNGYSQLG--NGTTNHGLTPALVS 122
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V +++ G H+ A T DG ++AWG+NN GQVG + P P S
Sbjct: 123 TNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSGQVGSGS----TANQPTPRRVSSCL 178
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S+ VV+V CG ++A+ D+ ++G G+N QL +G
Sbjct: 179 QSK--VVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLG 216
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 12/139 (8%)
Query: 20 PSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ L VV ++ CG +A+ G ++ WG GQLG ++G P I
Sbjct: 171 PRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGN--QQTPCRIA 228
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ VVQ++ G H+ A T +GF+YAWG N+ GQ+G K + + P + D +
Sbjct: 229 ALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQAL----PTLINTDKE 284
Query: 139 SQNIKVVDV-ACGSRHTLA 156
++V+V AC + HT A
Sbjct: 285 ----RMVEVAACHTSHTSA 299
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L +T VF+ G G LG + +EPR I L G
Sbjct: 17 ELRLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGL--GDLQSTIEPRRIDVLCGK 74
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+V +S G G H T DG ++AWG N Q+G G + H P S + +
Sbjct: 75 KIVSLSYGTGPHVVIATADGEVFAWGHNGYSQLG-NGTTN---HGLTPALVSTNLLGK-- 128
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V +VACGS HT+AL D ++ G+N Q+ G +Q P V +C
Sbjct: 129 RVTEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQ-------PTPRRVSSC 177
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P R+ + V +ACG+ H LALT EG V++WG S GQLG +G +N +
Sbjct: 222 QTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLG---TGNKSNQALPTL 278
Query: 78 RALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+V+++A SAA+TQ G + WG G V
Sbjct: 279 INTDKERMVEVAACHTSHTSAAKTQSGQVLMWGQCRGQAV 318
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4024 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4081
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4082 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4139
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+D+ACGS TL L DD+++W G +Y +L G
Sbjct: 4140 EA-----LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4245
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4246 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4299
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4300 -LQGKKVNRVACGSAHTLA 4317
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + L V +A G A+T EG V+S G + G+LG S + PR+
Sbjct: 2981 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQ 3039
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3040 ITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI--- 3094
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3095 EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L M S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3027 LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3086
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3087 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3134
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACG+R TLAL D+ ++ G ++ +L S GC
Sbjct: 3135 GDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194
Query: 179 GVSQ 182
+ Q
Sbjct: 3195 NIPQ 3198
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3143 PKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3200
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3253
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3254 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3298
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D + P +I +L+GLGVV++
Sbjct: 4147 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGSKVPMKIDSLTGLGVVKV 4204
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4257
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4258 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3148
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3149 LLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3203
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3204 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D V+ V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VIKVR 664
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CGS+ ++AL D ++ G + +L +G
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGLG 693
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3251
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3306
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3307 LEGQ--KITRVACGSSHSVA 3324
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGL---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPTALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
DS++I V +ACG + A
Sbjct: 760 DSKHI--VGIACGPAQSFA 776
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4141
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKV----PMK----I 4193
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4194 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + L V +AC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD------------MLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3954 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4012 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4066
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4067 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4106
>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 393
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ F + + G H A+ +EG +++WG+ QLG+ SS D PR + A
Sbjct: 37 PRILETFEGKNIAKLDFGATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDA 96
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGW-----NNGGQVGVEGKLDLVVHDPHPMSWS 134
L G+ +V IS G +H+ A ++G L+ WGW G +G G D + P +
Sbjct: 97 LRGIKIVDISCGEYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESI--PRLVRTL 154
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
D Q + V V CG HT+AL D +W G EY +L G G S VPE
Sbjct: 155 VD---QGVPVKSVECGELHTVALTKDGEIWAWGNGEYGRL--GNGASD-----NFEVPEP 204
Query: 195 VK 196
V+
Sbjct: 205 VE 206
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 91/202 (45%), Gaps = 45/202 (22%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT--DAN 71
S F +P +++F D + I+ G D A+T+ G V+SWG S QLG T N
Sbjct: 196 SDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYN 255
Query: 72 ME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
ME P + ALS + V Q+SAG H+AA T DG ++ WG KL L +PH
Sbjct: 256 METIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG----------AKLWL---EPH 302
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG---------------------- 167
M+ +D ++ V CG +T AL +L+ G
Sbjct: 303 EMTILKD-----ETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQPLLVE 357
Query: 168 -WNEYNQLSMGCGVSQVSVMTR 188
N YN +SM CG S + +T+
Sbjct: 358 SLNRYNVVSMTCGYSHMGALTK 379
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG-----SRGQLGYPSSGTDANME 73
+P +D + + DI+CG H A+ +EG +F+WG G G LG+ + G D ++
Sbjct: 90 IPRVVDALRGIKIVDISCGEYHTGAVDEEGKLFTWGWGGSTMKGSGALGH-AGGEDESI- 147
Query: 74 PREIRAL--SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR +R L G+ V + G H+ A T+DG ++AWG G++G + V P P+
Sbjct: 148 PRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEV--PEPV 205
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG--VSQVSVMTRL 189
+ F +NI ++ G T A+ + ++ G N ++QL +G G V ++ T
Sbjct: 206 EY---FADENI--ASISAGRDFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIP 260
Query: 190 SVPEHVKNCPIVKLFAEHWNSARLS 214
V E + N + ++ A + ++A ++
Sbjct: 261 VVVEALSNVNVAQVSAGYDHAAAVT 285
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
V + CG H +ALT++G +++WGNG G+LG +G N E P + + + IS
Sbjct: 161 VKSVECGELHTVALTKDGEIWAWGNGEYGRLG---NGASDNFEVPEPVEYFADENIASIS 217
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG + A T+ G +Y+WG N+ Q+G+ G L + ++ + + S N+ V V+
Sbjct: 218 AGRDFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALS-NVNVAQVSA 276
Query: 150 GSRHTLALCDDNS--LWGCG-WNEYNQLSM 176
G H A+ +D +WG W E +++++
Sbjct: 277 GYDHAAAVTNDGKMFMWGAKLWLEPHEMTI 306
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 44 LTQEGIVFSWGNGSRGQLGYPS---SGTDANME---PREIRALSGLGVVQISAGGWHSAA 97
++ + VF+WG G++GQLG+ S +G ++ E PR + G + ++ G HSAA
Sbjct: 1 MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60
Query: 98 RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
++G LY WG N Q+G + P + + IK+VD++CG HT A+
Sbjct: 61 IDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVD-----ALRGIKIVDISCGEYHTGAV 115
Query: 158 CDDNSLWGCGW 168
++ L+ GW
Sbjct: 116 DEEGKLFTWGW 126
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4024 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4081
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4082 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4139
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+D+ACGS TL L DD+++W G +Y +L G
Sbjct: 4140 EAL-----QGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4245
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4246 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4299
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4300 -LQGKKVNRVACGSAHTLA 4317
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + L V +A G A+T EG V+S G + G+LG S + PR+
Sbjct: 2981 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQ 3039
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3040 ITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI--- 3094
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3095 EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L M S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3027 LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3086
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3087 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3134
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3135 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194
Query: 179 GVSQ 182
+ Q
Sbjct: 3195 NIPQ 3198
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3200
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3253
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3254 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3298
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4147 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4204
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4257
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4258 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3148
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3203
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3204 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPTALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
DS++I V +ACG + A
Sbjct: 760 DSKHI--VGIACGPAQSFA 776
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3251
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3306
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3307 LEGQ--KITRVACGSSHSVA 3324
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D V+ V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VIKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQ 688
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4141
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4193
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4194 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + L V +AC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD------------MLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3954 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4012 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4066
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4067 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4106
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4090 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4147
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4148 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4205
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+D+ACGS TL L DD+++W G +Y +L G
Sbjct: 4206 EAL-----QGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4248
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4254 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4311
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4312 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4365
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4366 -LQGKKVNRVACGSAHTLA 4383
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + L V +A G A+T EG V+S G + G+LG S + PR+
Sbjct: 3047 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQ 3105
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3106 ITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI--- 3160
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3161 EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3207
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L M S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3093 LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3152
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3153 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3200
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3201 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3260
Query: 179 GVSQ 182
+ Q
Sbjct: 3261 NIPQ 3264
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 575 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 632
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 633 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 685
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 686 TLAVTENGQVWSWGDGDYGKLGRG 709
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3209 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3266
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3267 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3319
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3320 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3364
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4213 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4270
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4271 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4323
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4324 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4352
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3157 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3214
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3215 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3269
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3270 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3310
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 717 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 773
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 774 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPTALP-GL 827
Query: 138 DSQNIKVVDVACGSRHTLA 156
DS++I V +ACG + A
Sbjct: 828 DSKHI--VGIACGPAQSFA 844
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3261 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3317
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3318 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3372
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3373 LEGQ--KITRVACGSSHSVA 3390
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 622 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 679
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D V+ V
Sbjct: 680 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VIKVR 732
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 733 CGSQFSIALTKDGQVYSWGKGDNQ 756
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4150 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4207
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4208 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4259
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4260 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4300
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + L V +AC L L++ G V++ S + P+ ++
Sbjct: 511 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD------------MLAPQLVQG 558
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 559 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 614
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 615 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 655
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 4020 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4077
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4078 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4132
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4133 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4172
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4029 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4086
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4087 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4144
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+D+ACGS TL L DD+++W G +Y +L G
Sbjct: 4145 EAL-----QGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4187
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4193 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4250
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4251 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4304
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4305 -LQGKKVNRVACGSAHTLA 4322
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + L V +A G A+T EG V+S G + G+LG S + PR+
Sbjct: 2986 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQ 3044
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3045 ITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI--- 3099
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3100 EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3146
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L M S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3032 LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3091
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3092 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3139
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3140 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3199
Query: 179 GVSQ 182
+ Q
Sbjct: 3200 NIPQ 3203
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 512 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 569
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 570 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 622
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 623 TLAVTENGQVWSWGDGDYGKLGRG 646
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3148 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3205
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3206 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3258
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3259 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3303
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4152 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4209
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4210 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4262
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4263 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4291
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3096 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3153
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3154 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3208
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3209 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3249
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 654 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 710
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 711 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPTALP-GL 764
Query: 138 DSQNIKVVDVACGSRHTLA 156
DS++I V +ACG + A
Sbjct: 765 DSKHI--VGIACGPAQSFA 781
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3200 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3256
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3257 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3311
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3312 LEGQ--KITRVACGSSHSVA 3329
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 559 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 616
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D V+ V
Sbjct: 617 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VIKVR 669
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 670 CGSQFSIALTKDGQVYSWGKGDNQ 693
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4089 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4146
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4147 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4198
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4199 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4239
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + L V +AC L L++ G V++ S + P+ ++
Sbjct: 448 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD------------MLAPQLVQG 495
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L +P +S
Sbjct: 496 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL--EEPKVISAFSGK 553
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 554 QAGK-HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 592
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3959 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4016
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4017 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4071
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4072 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4111
>gi|66809941|ref|XP_638694.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
gi|60467249|gb|EAL65282.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
Length = 1800
Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 89/177 (50%), Gaps = 19/177 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++CGF+H L LT E +FS G GQLG + A P + LS V++I A
Sbjct: 76 VVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSA--VPLPVDTLSKFNVIKIKA 133
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW---------SEDFDSQN 141
G SAA T+ G LY WG + GQ+G GK++ +H P + +D QN
Sbjct: 134 GNNVSAAITEAGDLYCWGSSAYGQLG-NGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQN 192
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG-CGVSQVSVMTRLSVPEHVKN 197
++ ++ G++HT+A+ +++ G N+Y QL +G C V VP H+ N
Sbjct: 193 LQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLV------PVPIHLDN 243
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 37/196 (18%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP----------R 75
+ +L T+I G H +A++ G +FSWG+ GQLG +A + P R
Sbjct: 190 YQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGL--GHCNAKLVPVPIHLDNSFER 247
Query: 76 EIRALSGLG---------------VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
++ LG VV I+ G +HSA T +G L+ WG N GQ+G
Sbjct: 248 RAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDS 307
Query: 121 LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
LD V P + S +F +K+ +A G+ HT+ L + ++ G NE+ QL G
Sbjct: 308 LDQSV--PKTVKGSLEF----VKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHG--- 358
Query: 181 SQVSVMTRLSVPEHVK 196
+ RL P ++
Sbjct: 359 -SIGGKNRLYFPTQIQ 373
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN------- 71
+P +D V I G + A+T+ G ++ WG+ + GQLG +
Sbjct: 116 VPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTI 175
Query: 72 MEP------REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
+ P ++ L I G H+ A + G +++WG N GQ+G+ +V
Sbjct: 176 LNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLV 235
Query: 126 HDP------------HPMSWSE----DFDSQNIK--VVDVACGSRHTLALCDDNSLWGCG 167
P H S E DF ++ I VVD+ACG+ H+ L + L+ G
Sbjct: 236 PVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWG 295
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
N+Y QL G + Q SVP+ VK
Sbjct: 296 SNQYGQLGQGDSLDQ-------SVPKTVK 317
>gi|27695022|gb|AAH43960.1| LOC398469 protein, partial [Xenopus laevis]
Length = 589
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI-RALSG 82
L V +ACG H +ALT +G VFSWG + GQ+G SGT AN PR++ +L
Sbjct: 183 ELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCGQVG---SGTTANQSVPRKVASSLQS 239
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
VV ISAG S A T +G +Y WG+N GQ+G+ + ++ P + ++ Q I
Sbjct: 240 KVVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLGNTGNQLM--PCRLVFA-----QPI 292
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ V G HTLAL D L+ G N + QL +G
Sbjct: 293 CIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIG 327
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 10/161 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
MP R+D + D++ G H L ++G V+SWG+ QLG + T P ++
Sbjct: 123 MPRRLDVLCGKKIVDLSYGSGPHILLCNEDGEVYSWGHNGYSQLG--NGNTIQGTTPVQV 180
Query: 78 -RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L V+Q++ G HS A T DG +++WG+NN GQVG + V P ++ S
Sbjct: 181 CMELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSV--PRKVASS-- 236
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q+ VV ++ G ++AL D+ ++G G+N QL +G
Sbjct: 237 --LQSKVVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLG 275
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG-G 92
C + + TQ VF +G LG + + + PR + L G +V +S G G
Sbjct: 86 FGCSANEAIYTTQNNEVFVFGMNISSCLG--TGDNQSTIMPRRLDVLCGKKIVDLSYGSG 143
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H +DG +Y+WG N Q+G + P+ + S+ KV+ VACGS
Sbjct: 144 PHILLCNEDGEVYSWGHNGYSQLGNGN----TIQGTTPVQVCMELLSK--KVIQVACGSH 197
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
H++AL D ++ G+N Q+ G +Q SVP V
Sbjct: 198 HSMALTSDGEVFSWGYNNCGQVGSGTTANQ-------SVPRKV 233
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV I+ G +ALT G V+ WG GQLG ++G + P + + ++Q+
Sbjct: 241 VVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLGNTGN--QLMPCRLVFAQPICIIQVV 298
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
G H+ A + G LYAWG N+ GQ+G+ K + V
Sbjct: 299 LGYAHTLALSDQGVLYAWGANSHGQLGIGNKSNQTV 334
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP R+ + + + G+ H LAL+ +G++++WG S GQLG G +N + ++
Sbjct: 282 MPCRLVFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGI---GNKSN-QTVPVK 337
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNG 112
+ +V+++A SAA++Q +Y WG G
Sbjct: 338 VGTNERMVEVTACHSTNISAAKSQSEQVYMWGLCRG 373
>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1089
Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ CG++H ALT +G V +GNG +GQLG TD++ P+ + LSG GVV+++A
Sbjct: 46 IAEVFCGYEHTFALTSDGDVLGFGNGVKGQLGI--GNTDSHSNPQRVHLLSGKGVVKMAA 103
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH---PMSWSEDFDSQNIKVVDV 147
G HS A T+ G LYA+G N GQ+G+ P P+ + K+ +
Sbjct: 104 GLEHSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRA--------KITQL 155
Query: 148 ACGSRHTLALCDDNSLWGCGWN 169
ACG HT L L+ G N
Sbjct: 156 ACGQDHTAVLTSSGELFMFGNN 177
Score = 81.6 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 20/178 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA----NMEPREIRALSGLGVV 86
+T +ACG DH LT G +F +GN G LG + P+ + L G VV
Sbjct: 152 ITQLACGQDHTAVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVV 211
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP----HPMSWSEDFDSQNI 142
QI G H+ A T G +Y WG N GQ+G + + P P+S
Sbjct: 212 QIGCGLQHTVALTAAGGVYCWGENGRGQLGTGDTQNR--YTPSLVCKPLS--------AF 261
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV--PEHVKNC 198
K + VACG +HT+A+ D + ++G G + + QL +G V V TR+ VKNC
Sbjct: 262 KCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGRRGVIVPVPTRIVRLGGRRVKNC 319
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4024 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4081
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4082 DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4139
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVDVACGS TL L DD+++W G +Y +L G
Sbjct: 4140 EA-----LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4245
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H ++DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4246 QGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4299
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4300 -LQGKKVNRVACGSAHTLA 4317
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2981 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3038
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3039 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3094
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3095 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3027 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3086
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3087 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3134
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3135 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194
Query: 179 GVSQ 182
+ Q
Sbjct: 3195 NIPQ 3198
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3200
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3253
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3254 GLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 3298
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4147 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4204
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4257
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4258 TGSLHCVCCSEDGEVYTWGDNDEGQLGDG 4286
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3148
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3203
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3204 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3251
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3306
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3307 LEGQ--KITRVACGSSHSVA 3324
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P S
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEP-SALPGL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQ 688
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4084 PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4141
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV ++ +G + T D +++WG + G++G G V PM
Sbjct: 4142 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4193
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4194 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3954 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++GV G V P + E IK V V G +H LAL + ++ G
Sbjct: 4012 GYGAGGRLGVGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4066
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4067 EAEDGKLGHG----NRSPCDRPRVIESLRGTEVVDVAAGGAHSA 4106
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 1059 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGH--GNRSPC 1116
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 1117 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 1174
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+D+ACGS TL L DD+++W G +Y +L G
Sbjct: 1175 EA-----LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 1217
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 1223 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 1280
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 1281 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 1334
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 1335 -LQGKKVNRVACGSAHTLA 1352
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + L V +A G A+T EG V+S G + G+LG S + PR+
Sbjct: 16 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQ 74
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 75 ITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI--- 129
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 130 EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 176
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
L M S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 62 LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 121
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
+PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 122 N--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------HG 170
Query: 128 PHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCG 179
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 171 DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 230
Query: 180 VSQ 182
+ Q
Sbjct: 231 IPQ 233
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 178 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 235
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 236 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 288
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 289 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 333
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 1182 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 1239
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 1240 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 1292
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 1293 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 1321
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 126 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 183
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 184 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 238
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 239 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 279
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 230 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 286
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 287 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 341
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 342 LEGQ--KITRVACGSSHSVA 359
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 1119 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 1176
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 1177 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 1228
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 1229 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 1269
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 76/173 (43%), Gaps = 11/173 (6%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
D L+ G ++ WG+ RGQLG G + P AL+ L VQ+ G A
Sbjct: 980 DWTLSAGGSGTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAV 1037
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG LYA G+ GG++G+ G V P + E IK V V G +H LAL
Sbjct: 1038 TADGKLYATGYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALS 1092
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
+ ++ W E +G G S R V E ++ +V + A +SA
Sbjct: 1093 SEGEVY--SWGEAKDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 1141
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4025 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4082
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4083 DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4140
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVDVACGS TL L DD+++W G +Y +L G
Sbjct: 4141 EA-----LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4183
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4246
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H ++DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4247 QGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4300
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4301 -LQGKKVNRVACGSAHTLA 4318
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2981 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3038
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3039 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3094
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3095 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3027 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3086
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3087 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3134
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3135 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194
Query: 179 GVSQ 182
+ Q
Sbjct: 3195 NIPQ 3198
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3200
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3253
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3254 GLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 3298
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4205
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4206 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4258
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4259 TGSLHCVCCSEDGEVYTWGDNDEGQLGDG 4287
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3148
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3203
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3204 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3251
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3306
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3307 LEGQ--KITRVACGSSHSVA 3324
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P S
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEP-SALPGL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQ 688
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4085 PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4142
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV ++ +G + T D +++WG + G++G G V PM
Sbjct: 4143 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4194
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4195 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4235
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3955 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++GV G V P + E IK V V G +H LAL + ++ G
Sbjct: 4013 GYGAGGRLGVGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4067
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4068 EAEDGKLGHG----NRSPCDRPRVIESLRGTEVVDVAAGGAHSA 4107
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 15/169 (8%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDA 70
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ + S D
Sbjct: 4035 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD- 4093
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
PR I +L G VV I+AGG HSA T G LY WG G++G D + P
Sbjct: 4094 --RPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQL--KPKL 4149
Query: 131 MSWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + + +V+D+ACGS TL L DD+++W G +Y +L G
Sbjct: 4150 VEALQGY-----RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4193
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D + VT + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4199 KVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4256
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4257 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4310
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4311 -LQGKKINRVACGSAHTLA 4328
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Query: 29 LVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D++CG L++T+ G V+SWG+G G+LG G+D P+ I L L +V
Sbjct: 603 LKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDIV 660
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y+WG + ++G G + V + P M+ Q KVVD
Sbjct: 661 KVRCGSQFSIAITKDGQVYSWGKGDNQRLG-HGTEEHVRY-PKIMN-----GLQGKKVVD 713
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL + ++ G N+ Q
Sbjct: 714 VAVGSTHCLALTESGEVYSWGSNDQCQ 740
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2984 IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPI--PR 3041
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3042 QITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3097
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3098 -EALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQL 3144
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 83/175 (47%), Gaps = 23/175 (13%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS-GTDANMEPR 75
+P ++ + VV +A G H ALT +G VFSWG G G+LG+ S D +PR
Sbjct: 3039 IPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCD---KPR 3095
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I AL + I+ G HSAA T G LY WG G++G H +
Sbjct: 3096 LIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG---------HGDNTTQLKP 3146
Query: 136 DFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCGVSQ 182
+ +V+ VACGSR TLAL D+ ++ G ++ +L S GC + Q
Sbjct: 3147 KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3201
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 77/144 (53%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL+ +FSWG G G+LG+ T + EP+ + ALSG V+ I+ G +S
Sbjct: 506 HYLALSATSELFSWGCGDGGRLGH--GDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYS 563
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T DG LY WG N G++G D V PM + + +KVVDV+CGS
Sbjct: 564 AAITADGELYTWGRGNYGRLGHGSSEDQTV----PMLVT---GLKGLKVVDVSCGSGDAQ 616
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TL++ ++ +W G +Y +L G
Sbjct: 617 TLSVTENGQVWSWGDGDYGKLGRG 640
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ V DIACG L LT + V+SWG+G G+LG G+D P +I
Sbjct: 4147 PKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKI 4204
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+G+GV ++ G S A T+ G +Y WG + ++G G D H +
Sbjct: 4205 DSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQ 4257
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q KV+ +A GS H + +D ++ G N+ QL G
Sbjct: 4258 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4297
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL + + CG +A+T++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGH---GTEEHVRYPKIMN 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G VV ++ G H A T+ G +Y+WG N+ Q D L + P P S
Sbjct: 705 GLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQ-----HFDTLRIAKPVP-SVLPGL 758
Query: 138 DSQNIKVVDVACGSRHTLA 156
DS++I V ++CG + A
Sbjct: 759 DSKHI--VGISCGPAQSFA 775
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T +G +++WG G+ G+LG+ SS + P + L GL VV +S
Sbjct: 553 VIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSS--EDQTVPMLVTGLKGLKVVDVSC 610
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + + T++G +++WG + G++G G P + +D D +V V
Sbjct: 611 GSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----IVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++A+ D + WG G N+
Sbjct: 664 CGSQFSIAITKDGQVYSWGKGDNQ 687
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3094 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3151
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3152 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3206
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLW 164
+ Q V + CG++ +LAL +W
Sbjct: 3207 NGQ--AVCQIECGAQFSLALTKSGVVW 3231
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ V DIA G H +T G +++WG G G+LG+ S + ++P+ + A
Sbjct: 4095 PRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDS--EDQLKPKLVEA 4152
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4153 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4204
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + V V CGS+ ++AL +++ G +Y++L G
Sbjct: 4205 DSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4245
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3203
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAW 107
L+G V QI G S A T+ G ++ W
Sbjct: 3204 ERLNGQAVCQIECGAQFSLALTKSGVVWTW 3233
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFS--WGNGSRGQLGYPSSGTDANMEPREI 77
P + + +L VT +AC L L++ G +++ + N + G P+ +
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNNNTLG--------------PQLV 487
Query: 78 RALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L+ +V+I+A G H A + L++WG +GG++G + L +P +S +
Sbjct: 488 QGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVSL--EEPKLVS-AL 544
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
+V+ +ACGS ++ A+ D L+ G Y +L G Q M
Sbjct: 545 SGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPM 595
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3965 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4022
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4023 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4077
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4078 EAEDGKLGHG----NRSPCDRPRVIESLRGTEVVDIAAGGAHSA 4117
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4023 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4080
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4081 DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4138
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVDVACGS TL L DD+++W G +Y +L G
Sbjct: 4139 EA-----LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4181
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4187 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4244
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H ++DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4245 QGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4298
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4299 -LQGKKVNRVACGSAHTLA 4316
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2979 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3036
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3037 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3092
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3093 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3139
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3025 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3084
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3085 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3132
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3133 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3192
Query: 179 GVSQ 182
+ Q
Sbjct: 3193 NIPQ 3196
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3141 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3198
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3199 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3251
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3252 GLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 3296
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4146 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4203
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4204 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4256
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4257 TGSLHCVCCSEDGEVYTWGDNDEGQLGDG 4285
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3089 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3146
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3147 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3201
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3202 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3242
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3193 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3249
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3250 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3304
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3305 LEGQ--KITRVACGSSHSVA 3322
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P S
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEP-SALPGL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQ 688
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4083 PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4140
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV ++ +G + T D +++WG + G++G G V PM
Sbjct: 4141 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4192
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4193 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4233
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3953 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4010
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++GV G V P + E IK V V G +H LAL + ++ G
Sbjct: 4011 GYGAGGRLGVGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4065
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4066 EAEDGKLGHG----NRSPCDRPRVIESLRGTEVVDVAAGGAHSA 4105
>gi|224014889|ref|XP_002297106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968225|gb|EED86574.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 740
Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 22 RMDHFLDLVVTDIACGFDHCLALT-QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
R D ++ ++ACG +HC+A++ Q+G +FSWG G+ G+LG+ S + +P + AL
Sbjct: 193 RCDSLSNVQFKEVACGNNHCVAISAQDGALFSWGWGTNGRLGHMSE--EMCYQPTYVEAL 250
Query: 81 SGLG-VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
SG+ +++ G H+ A TQ+G +Y +GWN QV G+ D + PM E
Sbjct: 251 SGVEPFTRVACGAAHTLAGTQEGDVYGFGWNGHSQVA-GGETDCL----KPMLCLE---- 301
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR 188
N VV ++CG H+ A+ SL+ G N+ Q CGV + R
Sbjct: 302 -NQGVVRLSCGFAHSAAISSSGSLFTWGMNDDGQ----CGVGNEETVPR 345
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR-------A 79
+ L +ACG H L +G++ S G GQLG + + IR +
Sbjct: 137 VQLNAKQVACGDRHVCILQNDGMLMSLGANDAGQLGIGRQSKETKVPINHIRIVIKRCDS 196
Query: 80 LSGLGVVQISAGGWHSAA-RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
LS + +++ G H A QDG L++WGW G++G H M + +
Sbjct: 197 LSNVQFKEVACGNNHCVAISAQDGALFSWGWGTNGRLG---------HMSEEMCYQPTYV 247
Query: 139 SQNIKV---VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V VACG+ HTLA + ++G GWN ++Q++ G
Sbjct: 248 EALSGVEPFTRVACGAAHTLAGTQEGDVYGFGWNGHSQVAGG 289
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 21/135 (15%)
Query: 44 LTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGF 103
LT ++SWG + GT+ N R+++ LS V+++S G HSA G
Sbjct: 60 LTDGWEIYSWGK---------TVGTN-NQSVRKLQQLSN--VLEVSHGSNHSATVLSSGE 107
Query: 104 LYAWGWNNGGQVGVEG-KLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y WG +EG + + P ++ FD + VACG RH L +D
Sbjct: 108 VYGWG----EMSFLEGLRRKRTIKQPRKLT----FDKVQLNAKQVACGDRHVCILQNDGM 159
Query: 163 LWGCGWNEYNQLSMG 177
L G N+ QL +G
Sbjct: 160 LMSLGANDAGQLGIG 174
>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
Length = 1183
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 371 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 428
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 429 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 486
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
Q +V+D+ACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 487 E-----ALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 541
Query: 185 VMTRLSV 191
+T L V
Sbjct: 542 SLTGLGV 548
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 536 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 593
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 594 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVA-----A 646
Query: 139 SQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 647 LQGKKVNRVACGSAHTLA 664
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 494 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 551
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G D H + Q KV+ +A
Sbjct: 552 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGS-------DDHVRRPRQVQGLQGKKVIAIA 604
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 605 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 633
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 431 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 488
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 489 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 540
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 541 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 581
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 301 GTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 358
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 359 GYGAGGRLGIGGTES--VSTPTLL---ESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 413
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 414 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 453
>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Hydra magnipapillata]
Length = 364
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV 85
++ V +ACG H +ALT++G V++WG+ + GQLG S A P+ + + +
Sbjct: 121 YMQKKVIQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQAT--PKRVSLIPSKKI 178
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
V +S G + T DG LY+WG+N GQ+G+E + + P+ + + I+
Sbjct: 179 VSVSCGQSFTVMLTTDGELYSWGYNGNGQLGIENNTNQL----QPVRVTGSLFGKFIE-- 232
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ CG H L L D L+ G N Y QL +G
Sbjct: 233 KIVCGMAHVLVLTDIGELYSWGANSYGQLGLG 264
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P ++ + +A G H LA+T G ++SWG+G GQLG+ S + + +
Sbjct: 65 PKIIEQLCQKDIVQLAYGMGPHVLAVTDSGELYSWGHGGYGQLGHTSE-----EKSKPVL 119
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
V+Q++ G +HS A T+DG +YAWG NN GQ+G L + + P S
Sbjct: 120 VYMQKKVIQVACGSYHSIALTEDGEVYAWGSNNCGQLG----LGISNNQATPKRVSL--- 172
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+ K+V V+CG T+ L D L+ G+N QL + +Q+
Sbjct: 173 IPSKKIVSVSCGQSFTVMLTTDGELYSWGYNGNGQLGIENNTNQL 217
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 21/188 (11%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+PS + + G + L LT G V++ G G LG + +EP+ I
Sbjct: 13 IPSSLATKVKKAFVFGGAGNEALLTLTN-GDVYALGFNGNGCLGVGDG--SSTLEPKIIE 69
Query: 79 ALSGLGVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L +VQ++ G G H A T G LY+WG GQ+G H S
Sbjct: 70 QLCQKDIVQLAYGMGPHVLAVTDSGELYSWGHGGYGQLG---------HTSEEKSKPVLV 120
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
Q KV+ VACGS H++AL +D ++ G N QL +G +Q + P+ V
Sbjct: 121 YMQK-KVIQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQAT-------PKRVSL 172
Query: 198 CPIVKLFA 205
P K+ +
Sbjct: 173 IPSKKIVS 180
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
+ I CG H L LT G ++SWG S GQLG GT N P I + I+
Sbjct: 231 IEKIVCGMAHVLVLTDIGELYSWGANSYGQLGL---GTTHNTSVPTLINTTTDDRWSDIA 287
Query: 90 AGGWH--SAARTQDGFLYAWG 108
A ++ SA T G +Y WG
Sbjct: 288 AHHYNHISAGVTISGKIYMWG 308
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ VT IACG +H LA T G VF+WG G G LG D ++ P ++
Sbjct: 161 LPQPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGV-GPPEDRHL-PSQVH 218
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G+ V ++ G HS A + G +Y +GW+ GQ+G +D +V P + D
Sbjct: 219 GLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQLV----PKAVESLKD 274
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
S ++V +A G RHT A D L+ GWN++ QL +G + VP N
Sbjct: 275 S---RIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTD-----SNAPVPVQGLNT 326
Query: 199 PIVKLFAEHWN 209
VKL + W
Sbjct: 327 SPVKLLSCGWR 337
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
DL VT ++CG H LAL GI SWG G GQLG+ + + +PR I L
Sbjct: 13 DLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDA--EERKKPRAIFHLMQASCSA 70
Query: 88 ISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
+ +G +S A +Q +Y+WGW + G++G D+ + P P+ +NI V
Sbjct: 71 VCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFI--PQPI---RALAGRNI--VK 123
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
VACG HTLA+ D L+ G N+ QL +G
Sbjct: 124 VACGDTHTLAVTDTGELFSFGRNQNGQLGLG 154
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 14/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSRGQLGYPSSGTDAN--MEPRE 76
P + H + + + G ++ +AL+Q V+SWG G G+LG+ D N P+
Sbjct: 57 PRAIFHLMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGH----GDCNDVFIPQP 112
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
IRAL+G +V+++ G H+ A T G L+++G N GQ+G+ D ++ P P+ E
Sbjct: 113 IRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAIL--PQPV---ES 167
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V +ACG H+LA ++ GW Y L +G
Sbjct: 168 LRGQ--EVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVG 206
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 85/155 (54%), Gaps = 13/155 (8%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H+PS++ + VT +ACG+ H +A + G V+++G GQLG+ + P+ +
Sbjct: 212 HLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGH--GDCIDQLVPKAV 269
Query: 78 RALSGLGVVQISAGGW-HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+L +V I AGGW H++A G LY+WGWN GQ+G+ D + P P+ +
Sbjct: 270 ESLKDSRIVLI-AGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTD--SNAPVPV---QG 323
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN 169
++ +K+ ++CG RHT A+ + + WG G N
Sbjct: 324 LNTSPVKL--LSCGWRHTFAVTEAGDVFSWGRGVN 356
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ D + IA G+ H A G ++SWG GQLG S TD+N P ++
Sbjct: 265 VPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGI-GSNTDSNA-PVPVQ 322
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
L+ V +S G H+ A T+ G +++WG GQ+G
Sbjct: 323 GLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLG 360
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
++CG+ H A+T+ G VFSWG G GQLG+
Sbjct: 332 LSCGWRHTFAVTEAGDVFSWGRGVNGQLGH 361
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4028 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4085
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ +V ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4086 DRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4143
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
Q +VVDVACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 4144 EA-----LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 4198
Query: 185 VMTRLSV 191
+T L V
Sbjct: 4199 SLTGLGV 4205
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4192 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4249
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P +
Sbjct: 4250 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVPA---- 4303
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4304 -LQGKKVNRVACGSAHTLA 4321
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDAN 71
LSQ+ +PS + L V +A G A+T EG V++ G + G+LG SSGT
Sbjct: 2981 LSQI-KVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI 3039
Query: 72 MEPREIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
PR++ ALS V V + +GG H+ A T DG +++WG + G++G +++ P
Sbjct: 3040 --PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPR 3095
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3096 LI---EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3145
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D V PM + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAV----PMLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3203
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3204 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3256
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3257 GLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 3301
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3030 LGISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3089
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3090 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3137
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3138 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3197
Query: 179 GVSQ 182
+ Q
Sbjct: 3198 NIPQ 3201
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4151 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4208
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4209 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4261
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4262 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4290
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3094 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3151
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3152 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3206
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3207 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3247
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3254
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3255 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3309
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3310 LEGQ--KITRVACGSSHSVA 3327
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P S
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEP-SALPGL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAV--PMLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQ 688
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + + D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4088 PRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4145
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV ++ +G + T D +++WG + G++G G V PM
Sbjct: 4146 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4197
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4198 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4238
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3958 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4015
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4016 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4070
Query: 168 WNEYNQLSMG 177
E +L G
Sbjct: 4071 EAEDGKLGHG 4080
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G H LAL+++ ++++WGN GQLG T +P + LSGL +V I+AGGW
Sbjct: 205 IAVGAFHNLALSEDAVLWAWGNNEYGQLGI--GDTQPRSQPIRVEGLSGLSLVDIAAGGW 262
Query: 94 HSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
HS A T+DG +YAWG G++G + K +V P+ + D ++I V V+CG
Sbjct: 263 HSTALTKDGEVYAWGRGEHGRLGFGDDKSSHMV----PLK-VQLLDGEDI--VQVSCGGT 315
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
H++AL D ++ G ++ +L G V+
Sbjct: 316 HSVALTSDGRIFSYGRGDHGRLGYGRKVT 344
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 23/157 (14%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P R++ L + DIA G H ALT++G V++WG G G+LG+ ++M
Sbjct: 237 TQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGF-GDDKSSHMV 295
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHD 127
P +++ L G +VQ+S GG HS A T DG ++++G + G++G K +++ ++
Sbjct: 296 PLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSYGRGDHGRLGYGRKVTTGHPMEVPLNL 355
Query: 128 PHPMS-------WSEDFDSQNIKVVDVACGSRHTLAL 157
P P + W +F VACG RHTLA+
Sbjct: 356 PPPKTSAGPDGLWQANF---------VACGGRHTLAI 383
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 97/240 (40%), Gaps = 52/240 (21%)
Query: 22 RMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS 81
R+ V+ + G + LA+ +G +F+WG RG LG+P T P + AL+
Sbjct: 34 RVAALDPYAVSAVVAGSRNSLAICDDGRLFTWGWNQRGTLGHPPE-TKTESSPAPVEALA 92
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD------------------- 122
G+ +VQ + GGWH A G YAWG N GQ G E +
Sbjct: 93 GVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAL 152
Query: 123 ---------------LVVHDPHPMSWSEDFDSQNI-------------KVVDVACGSRHT 154
++ + H +W + + +I KV+ +A G+ H
Sbjct: 153 KLKVQQVAAGGTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVMMIAVGAFHN 212
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
LAL +D LW G NEY QL G+ ++ E + +V + A W+S L+
Sbjct: 213 LALSEDAVLWAWGNNEYGQL----GIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALT 268
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 57/133 (42%), Gaps = 14/133 (10%)
Query: 44 LTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGF 103
L + V +WG+G GQLG G D + AL V + AG +S A DG
Sbjct: 4 LPRPAAVLAWGSGEDGQLGM--GGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDGR 61
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ---NIKVVDVACGSRHTLALCDD 160
L+ WGWN G +G H P + S + +K+V A G H LA+ D
Sbjct: 62 LFTWGWNQRGTLG---------HPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDK 112
Query: 161 NSLWGCGWNEYNQ 173
+ G NEY Q
Sbjct: 113 GRAYAWGGNEYGQ 125
>gi|326427987|gb|EGD73557.1| hypothetical protein PTSG_05264 [Salpingoeca sp. ATCC 50818]
Length = 441
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG H + L G V++WG G GQLG+ S + PR + AL G+ + I+A
Sbjct: 248 IKQLACGKTHSMVLDTHGDVWAWGRGGFGQLGHGSIHDEPT--PRPVEALQGMCMSMIAA 305
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS----------- 139
GGWHS + G +Y++GWNN Q+G + D P + E DS
Sbjct: 306 GGWHSLVLSSSGDVYSFGWNNHHQLGRD-TTDTPPAVPGLIELEESSDSTADNEQTHSLR 364
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP---EHVK 196
VV VACGS H+ A+ ++G GW E+ Q G + V+ +P +H
Sbjct: 365 HGEDVVSVACGSAHSYAVTSVGQVFGWGWAEHGQF--GPNTKESHVIKPTVIPFLQQHTV 422
Query: 197 NC 198
C
Sbjct: 423 RC 424
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT----------- 68
P ++ + ++ IA G H L L+ G V+S+G + QLG ++ T
Sbjct: 289 PRPVEALQGMCMSMIAAGGWHSLVLSSSGDVYSFGWNNHHQLGRDTTDTPPAVPGLIELE 348
Query: 69 ---DANMEPREIRALS-GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
D+ + + +L G VV ++ G HS A T G ++ WGW GQ G K V
Sbjct: 349 ESSDSTADNEQTHSLRHGEDVVSVACGSAHSYAVTSVGQVFGWGWAEHGQFGPNTKESHV 408
Query: 125 V 125
+
Sbjct: 409 I 409
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 82/155 (52%), Gaps = 12/155 (7%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSG 82
+ ++ VT++ACG H + LT +G V++WG + GQ+G SG+ AN PR + + L
Sbjct: 124 NLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVG---SGSTANQAIPRRVTSCLQN 180
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
V I+ G S A ++G +Y WG+N GQ+G+ + P P + Q I
Sbjct: 181 KIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGN----QPTPCRIAA---LQGI 233
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+V VACG HTL L D+ ++ G N Y QL G
Sbjct: 234 RVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTG 268
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + + +IACG +A+ + G V+ WG GQLG +SG P I
Sbjct: 170 IPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPT--PCRI 227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G + + +P+ + D
Sbjct: 228 AALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRSN----QSYPVPITVDK 283
Query: 138 DSQNIKVVDV-ACGSRHTLALCDDNS---LWG 165
D +V+++ AC S HT A S +WG
Sbjct: 284 D----RVIEIAACHSAHTSAAKTQGSQVYMWG 311
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L +T+ VF+ G G LG T ++EPR + L G
Sbjct: 17 ELKLIRQACVFGSAGNEVLYVTENNEVFALGTNCSGCLGV--GDTQNSVEPRRLDTLCGK 74
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G +Y WG N Q+G + ++ P S + N
Sbjct: 75 KITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNNSLL----PCQISTNL--VNK 128
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
KV +VACGS H++ L D ++ G+N Q+ G +Q ++P V +C
Sbjct: 129 KVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQ-------AIPRRVTSC 177
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG +++WG S GQLG +G +N
Sbjct: 224 PCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLG---TGNRSNQSYPVPIT 280
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ V++I+A SAA+TQ +Y WG G +
Sbjct: 281 VDKDRVIEIAACHSAHTSAAKTQGSQVYMWGQCRGQSI 318
>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
Length = 527
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRA-LSGLGVVQI 88
V ++ACG H +ALT +G VF+WG + GQ+G SG+ AN PR + + L VV I
Sbjct: 130 VIEVACGSHHTIALTTDGEVFAWGYNNSGQVG---SGSTANQPTPRRVSSCLQNKAVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G+ ++ + + Q + V+ VA
Sbjct: 187 ACGQLCSMAVLDSGEIYGWGYNCNGQLGLG-------NNGNQQTPCRIAALQGVSVIQVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
CG HTLAL D+ ++ G N Y QL G +Q
Sbjct: 240 CGYAHTLALTDEGFVYAWGANSYGQLGTGNKCNQ 273
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H T +G VFSWG+ QLG + T+ + P +
Sbjct: 65 PRRIDALCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLG--NGTTNHGLTPALVS 122
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V++++ G H+ A T DG ++AWG+NN GQVG + P P S
Sbjct: 123 TNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGS----TANQPTPRRVSSCL 178
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ D ++G G+N QL +G
Sbjct: 179 --QNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLG 216
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + + +T VF+ G G LG + +EPR I AL G
Sbjct: 17 ELRLIRQACVFGSAANEAIYVTVNDEVFALGTNCSGCLGL--GDLQSTIEPRRIDALCGK 74
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+V +S G G H A T DG +++WG N Q+G G + H P S + +
Sbjct: 75 KIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLG-NGTTN---HGLTPALVSTNLLGK-- 128
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS HT+AL D ++ G+N Q+ G +Q P V +C
Sbjct: 129 RVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ-------PTPRRVSSC 177
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P R+ + V +ACG+ H LALT EG V++WG S GQLG +G N +
Sbjct: 222 QTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLG---TGNKCNQALPTL 278
Query: 78 RALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVG 116
+ +++A SAA+TQ G + WG G V
Sbjct: 279 INTDKERMAEVAACHTSHTSAAKTQSGQVLMWGQCRGQAVA 319
>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
Length = 958
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 15/169 (8%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDA 70
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ + S D
Sbjct: 293 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD- 351
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P
Sbjct: 352 --RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKL 407
Query: 131 MSWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ Q +V+D+ACGS TL L DD+++W G +Y +L G
Sbjct: 408 VEA-----LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 451
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 458 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 515
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 516 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA----- 568
Query: 139 SQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 569 LQGKKVNRVACGSAHTLA 586
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 416 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 473
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 474 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 526
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 527 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 555
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 353 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 410
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 411 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 462
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 463 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 503
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 223 GTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 280
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 281 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 335
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 336 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 375
>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1070
Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 24/201 (11%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR-------ALS 81
L ++ G+ H LA+ +G ++WG + GQLG +S +++ P +R A
Sbjct: 734 LKAVQVSAGWHHSLAVGSDGYTYAWGLNNYGQLG--NSSKNSSSFPVRVRDFASPNDANK 791
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG----VEGKLDLVVHDPHPMSWSEDF 137
GL VQ+SAG HS A DG+ YAWG NN GQ+G V+ + + V DP S
Sbjct: 792 GLKAVQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPT----SPKD 847
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
S+ +K + G H+LA+ ++ + GWN Y QL G + SVP V++
Sbjct: 848 ASKGLKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDG-------TTSNSSVPVPVRD 900
Query: 198 CPIVKLFAEHWNSARLSVPEH 218
++ + R SV +H
Sbjct: 901 PTSPADASKGLQATRFSVGDH 921
Score = 84.0 bits (206), Expect = 5e-14, Method: Composition-based stats.
Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 31/165 (18%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--------------PSSGTDANME 73
D ++ G H LAL +G V++WG+ GQLG P++ TD N
Sbjct: 615 DFTYVQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPN-- 672
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD----LVVHDPH 129
GL +Q+SAG HS A +G++YAWGWN+ G++G D + V DP
Sbjct: 673 -------KGLKAIQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPA 725
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
S S+ +K V V+ G H+LA+ D + G N Y QL
Sbjct: 726 ----SPTDPSKGLKAVQVSAGWHHSLAVGSDGYTYAWGLNNYGQL 766
Score = 79.0 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 16/142 (11%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV----VQISAGGWHSAA 97
LA+ +G ++WG+ + GQLG + T++ P +R +G+ VQ+SAG WHS A
Sbjct: 573 LAVGSDGKAYAWGDNTYGQLG--DATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHSLA 630
Query: 98 RTQDGFLYAWGWNNGGQVGVEGKLD----LVVHDP-HPMSWSEDFDSQNIKVVDVACGSR 152
DG++YAWG N GQ+G K + + V DP +P ++ +K + V+ G
Sbjct: 631 LGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTD-----PNKGLKAIQVSAGDE 685
Query: 153 HTLALCDDNSLWGCGWNEYNQL 174
H+LAL + ++ GWN+ +L
Sbjct: 686 HSLALDSNGYVYAWGWNDNGRL 707
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/158 (36%), Positives = 78/158 (49%), Gaps = 19/158 (12%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR-------ALS 81
L ++ G +H LAL G V++WG G+LG S+ TD+++ P +R
Sbjct: 675 LKAIQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNST-TDSSV-PVRVRDPASPTDPSK 732
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
GL VQ+SAG HS A DG+ YAWG NN GQ+G K P+ DF S N
Sbjct: 733 GLKAVQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNS----SSFPVR-VRDFASPN 787
Query: 142 -----IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+K V V+ G H+LA+ D + G N Y QL
Sbjct: 788 DANKGLKAVQVSAGYSHSLAVGSDGYTYAWGLNNYGQL 825
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR-------ALS 81
L ++ G+ H LA+ +G ++WG + GQLG +S T + P +R A
Sbjct: 793 LKAVQVSAGYSHSLAVGSDGYTYAWGLNNYGQLG--NSNTVDSTVPVRVRDPTSPKDASK 850
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
GL I+AGG HS A +G+ YAWGWN Q+G + V P S S+
Sbjct: 851 GLKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKG 910
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ + G H+LA+ + + G N Y QL G
Sbjct: 911 LQATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDG 946
>gi|403350728|gb|EJY74833.1| hypothetical protein OXYTRI_03788 [Oxytricha trifallax]
Length = 1271
Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + D + IACG +H L LT + VF+WG G GQLG S A+ P+ I++
Sbjct: 490 PTVLKPLRDKRIVQIACGENHSLVLTDKADVFAWGRGFEGQLGLSKSIEIAST-PQYIKS 548
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
G V I+AG +S A T+DG ++ WG GQ+G+ + + V P +S+ +D ++
Sbjct: 549 FYGKPVSYIAAGSQYSLAITKDGSVWGWGEAKLGQLGMGKQRE--VRLPTKISFGDDENA 606
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N + + G H+ AL + L+ G+N + QL
Sbjct: 607 KNF--IQCSAGYGHSAALTQEGHLYTWGFNNFGQL 639
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 18/198 (9%)
Query: 23 MDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG 82
M H L ++ G +H L LT++G VFS+G+G+ +G+ G+ + P ++ L
Sbjct: 446 MGHLLS-----VSSGRNHSLHLTRDGDVFSYGSGTFSAVGH--GGSKGQLNPTVLKPLRD 498
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+VQI+ G HS T ++AWG GQ+G+ ++ + P + + F + +
Sbjct: 499 KRIVQIACGENHSLVLTDKADVFAWGRGFEGQLGLSKSIE-IASTPQ---YIKSFYGKPV 554
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV--PEHVKNCPI 200
+A GS+++LA+ D S+WG G + QL MG +V + T++S E+ KN
Sbjct: 555 SY--IAAGSQYSLAITKDGSVWGWGEAKLGQLGMG-KQREVRLPTKISFGDDENAKN--F 609
Query: 201 VKLFAEHWNSARLSVPEH 218
++ A + +SA L+ H
Sbjct: 610 IQCSAGYGHSAALTQEGH 627
Score = 67.0 bits (162), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ P + F V+ IA G + LA+T++G V+ WG GQLG
Sbjct: 538 EIASTPQYIKSFYGKPVSYIAAGSQYSLAITKDGSVWGWGEAKLGQLGMGKQ-------- 589
Query: 75 REIRALSGLGV---------VQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
RE+R + + +Q SAG HSAA TQ+G LY WG+NN GQ+G
Sbjct: 590 REVRLPTKISFGDDENAKNFIQCSAGYGHSAALTQEGHLYTWGFNNFGQLG 640
>gi|156098949|ref|XP_001615489.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804363|gb|EDL45762.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 456
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 14 SQVFHMPSRMDHFL--DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
Q P +++ F D +I CG H L LT+ G V+ G G G+LG + G
Sbjct: 202 KQNLSTPKKVESFKSDDSEFVNICCGDQHSLVLTKNGKVYGCGRGEFGRLGKGNHGDQLF 261
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-DLVVHDPHP 130
E + + + V IS G SAA + DG +Y WG N+ GQ+G+E + DL H+ +P
Sbjct: 262 FEEIDFFISNNITVKGISCGHSFSAALSTDGEVYVWGRNDYGQLGIENSIGDLYSHEVYP 321
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WG 165
+ FD +NIK+ +ACG H +A ++N + WG
Sbjct: 322 NK-VKYFDMENIKIKFIACGDNHMIACSENNVIFFWG 357
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDAN----ME 73
MP ++ +F + + ++ G DH A +G +F++G +GQLG D N +
Sbjct: 92 MPEKVPNFENAKIEKLSAGCDHA-AFIVDGRIFTYGLNDKGQLGRSIEEENDQNKSYTLT 150
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PRE++ + + G H+ A + LY+WGW G G +
Sbjct: 151 PREVKTEGNVKFKDVCCGYKHTVAVDVNNNLYSWGWGGNFFKGANGLGHGNKQNLSTPKK 210
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E F S + + V++ CG +H+L L + ++GCG E+ +L G
Sbjct: 211 VESFKSDDSEFVNICCGDQHSLVLTKNGKVYGCGRGEFGRLGKG 254
>gi|46249868|gb|AAH68834.1| LOC398469 protein [Xenopus laevis]
Length = 530
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI-RALSG 82
L V +ACG H +ALT +G VFSWG + GQ+G SGT AN PR++ +L
Sbjct: 124 ELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCGQVG---SGTTANQSVPRKVASSLQS 180
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
VV ISAG S A T +G +Y WG+N GQ+G+ + ++ P + ++ Q I
Sbjct: 181 KVVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLGNTGNQLM--PCRLVFA-----QPI 233
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ V G HTLAL D L+ G N + QL +G
Sbjct: 234 CIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIG 268
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 10/161 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
MP R+D + D++ G H L ++G V+SWG+ QLG + T P ++
Sbjct: 64 MPRRLDVLCGKKIVDLSYGSGPHILLCNEDGEVYSWGHNGYSQLG--NGNTIQGTTPVQV 121
Query: 78 -RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L V+Q++ G HS A T DG +++WG+NN GQVG + V P ++ S
Sbjct: 122 CMELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSV--PRKVASS-- 177
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q+ VV ++ G ++AL D+ ++G G+N QL +G
Sbjct: 178 --LQSKVVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLG 216
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 16/163 (9%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG-G 92
C + + TQ VF +G LG + + + PR + L G +V +S G G
Sbjct: 27 FGCSANEAIYTTQNNEVFVFGMNISSCLG--TGDNQSTIMPRRLDVLCGKKIVDLSYGSG 84
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H +DG +Y+WG N Q+G G + P+ + S+ KV+ VACGS
Sbjct: 85 PHILLCNEDGEVYSWGHNGYSQLG-NGN---TIQGTTPVQVCMELLSK--KVIQVACGSH 138
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
H++AL D ++ G+N Q+ G +Q SVP V
Sbjct: 139 HSMALTSDGEVFSWGYNNCGQVGSGTTANQ-------SVPRKV 174
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV I+ G +ALT G V+ WG GQLG ++G + P + + ++Q+
Sbjct: 182 VVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLGNTGN--QLMPCRLVFAQPICIIQVV 239
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
G H+ A + G LYAWG N+ GQ+G+ K + V
Sbjct: 240 LGYAHTLALSDQGVLYAWGANSHGQLGIGNKSNQTV 275
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP R+ + + + G+ H LAL+ +G++++WG S GQLG G +N + ++
Sbjct: 223 MPCRLVFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGI---GNKSN-QTVPVK 278
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNG 112
+ +V+++A SAA++Q G +Y WG G
Sbjct: 279 VGTNERMVEVTACHSTNISAAKSQSGQVYMWGLCRG 314
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 95/187 (50%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4003 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4060
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV I+AGG HSA T G L+ WG G++G D + P +
Sbjct: 4061 DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLV 4118
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
+ + +V+D+ACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 4119 EALQGY-----RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 4173
Query: 185 VMTRLSV 191
+T L V
Sbjct: 4174 SLTGLGV 4180
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4167 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4224
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4225 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4278
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4279 -LQGKKINRVACGSAHTLA 4296
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 77/144 (53%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL+ G VFSWG G G+LG+ T EP+ I ALSG VV I+ G +S
Sbjct: 483 HYLALSANGEVFSWGCGDGGRLGH--GDTVPLEEPKLISALSGKQAGKHVVHIACGSTYS 540
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DV+CGS
Sbjct: 541 AAITAEGELYTWGRGNYGRLGHGSSEDQTI----PMLVT---GLKGLKVIDVSCGSGDAQ 593
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 594 TLAVTENGQVWSWGDGDYGKLGRG 617
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ + VV +A G H +ALT +G +FSWG G G+LG+ S
Sbjct: 3006 LGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRM 3065
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3066 NCD---KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG---------H 3113
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3114 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3173
Query: 179 GVSQ 182
+ Q
Sbjct: 3174 NIPQ 3177
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2960 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3017
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3018 QITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3073
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3074 -EALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLK 3121
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 29 LVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D++CG LA+T+ G V+SWG+G G+LG G+D P+ I L L +V
Sbjct: 580 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDIV 637
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y WG + ++G G + H +P E + KV+D
Sbjct: 638 KVRCGSQFSIALTKDGQVYTWGKGDNQRLG-HGTEE---HVRYP-KLLEGLKGK--KVID 690
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 691 VAAGSTHCLALTEDSEVHSWGSNDQCQ 717
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3122 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3179
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G D+ V P +
Sbjct: 3180 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG--HGTDVHVRKPQVVE----- 3232
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3233 GLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVN 3277
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ V DIACG L LT + V+SWG+G G+LG G+D P +I
Sbjct: 4115 PKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKI 4172
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+GLGVV++ G S A T+ G +Y WG + ++G G D H +
Sbjct: 4173 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQ 4225
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q KV+ +A GS H + +D ++ G N+ QL G
Sbjct: 4226 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4265
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++ +P+
Sbjct: 3174 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVRKPQV 3230
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3231 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3285
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3286 LEGQ--KITRVACGSSHSVA 3303
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3070 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3127
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3128 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3182
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3183 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3223
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS + P + L GL V+ +S
Sbjct: 530 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS--EDQTIPMLVTGLKGLKVIDVSC 587
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D +V V
Sbjct: 588 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----IVKVR 640
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 641 CGSQFSIALTKDGQVYTWGKGDNQ 664
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL + + CG +ALT++G V++WG G +LG+ GT+ ++ P+ +
Sbjct: 625 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH---GTEEHVRYPKLLE 681
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L + P P +
Sbjct: 682 GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRITKPEPAALP-GL 735
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
D+++I V +ACG + A W+ ++ S+G L VP V
Sbjct: 736 DTKHI--VGIACGPAQSFA-----------WSSCSEWSIG-----------LRVPFVVDV 771
Query: 198 CPIV 201
CP+
Sbjct: 772 CPMT 775
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V DIA G H +T G +F+WG G G+LG+ S + ++P+ + A
Sbjct: 4063 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDS--EDQLKPKLVEA 4120
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4121 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4172
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4173 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4213
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + L V IAC L L++ G V++ S + P+ +++
Sbjct: 419 PIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYNSD------------TLGPQLVQS 466
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A + +G +++WG +GG++G + L +P +S +
Sbjct: 467 LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL--EEPKLIS-ALSG 523
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
VV +ACGS ++ A+ + L+ G Y +L G Q M
Sbjct: 524 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 572
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3933 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3990
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 3991 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4045
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4046 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDIAAGGAHSA 4085
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4026 TESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4083
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR + +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4084 DRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4141
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 4142 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4184
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4190 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4247
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4248 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4301
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4302 -LQGKKVNRVACGSAHTLA 4319
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2982 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PR 3039
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3040 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3095
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3096 -EALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLK 3143
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3028 LGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3087
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3088 NCD---KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG---------H 3135
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3136 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3195
Query: 179 GVSQ 182
+ Q
Sbjct: 3196 NIPQ 3199
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 76/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D V+ P+ + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEVI----PVLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3144 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3201
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3202 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3254
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3255 GLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 3299
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4149 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4206
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4207 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4259
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4260 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4288
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3092 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3149
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3150 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3204
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3205 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3245
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3196 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3252
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3253 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3307
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3308 LEGQ--KITRVACGSSHSVA 3325
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P S
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEP-SALPGL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS + + P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS--EDEVIPVLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQ 688
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4086 PRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4143
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4144 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4195
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4196 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4236
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 19/167 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + L VT IAC L L++ G V++ S DA + P+ ++
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYNS-----------DA-LAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +++I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 491 LASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
Q K VV +ACGS ++ A+ + L+ G Y +L G +V
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEV 593
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3956 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4013
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4014 GYGAGGRLGIGGTES--VSTP---TLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4068
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4069 EAEDGKLGHG----NRSPCDRPRVVESLRGIEVVDVAAGGAHSA 4108
>gi|303285544|ref|XP_003062062.1| E3 ubiquitin-protein ligase [Micromonas pusilla CCMP1545]
gi|226456473|gb|EEH53774.1| E3 ubiquitin-protein ligase [Micromonas pusilla CCMP1545]
Length = 1316
Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/143 (42%), Positives = 80/143 (55%), Gaps = 11/143 (7%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVV 86
D+ +ACG H LALT G V+S+G G+RG LG+ G DA+ + PR +RAL G+
Sbjct: 226 DVRFARVACGDAHTLALTGGGKVYSFGVGARGVLGH---GDDASSVAPRTVRALWHAGIT 282
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
Q+SAG HSAA DG +Y WG N GQ+G G + H P S + I V+
Sbjct: 283 QVSAGKTHSAALGVDGAVYTWGGNARGQLGQGGVVGRDAHTP-----SRVRALRRIACVE 337
Query: 147 VACGSRHTLALCDDNSL--WGCG 167
+ACG HTLA+ S+ WG G
Sbjct: 338 IACGGEHTLAIARGGSVLAWGRG 360
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPRE 76
H PSR+ + +IACG +H LA+ + G V +WG GS G G G A+ + PR
Sbjct: 322 HTPSRVRALRRIACVEIACGGEHTLAIARGGSVLAWGRGSFGPTG---EGAVADVVSPRR 378
Query: 77 IRAL---SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+ + +++AG HS A T G + WG N+ GQ+G
Sbjct: 379 VEYFGVTTREPATRVAAGARHSVASTTTGAVVTWGANDRGQLG 421
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T ++ G H AL +G V++WG +RGQLG P +RAL + V+I+
Sbjct: 281 ITQVSAGKTHSAALGVDGAVYTWGGNARGQLGQGGVVGRDAHTPSRVRALRRIACVEIAC 340
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A + G + AWG + G G EG + VV P + + + VA G
Sbjct: 341 GGEHTLAIARGGSVLAWGRGSFGPTG-EGAVADVV-SPRRVEYFGVTTRE--PATRVAAG 396
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+RH++A ++ G N+ QL G
Sbjct: 397 ARHSVASTTTGAVVTWGANDRGQLGRG 423
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 22 RMDHFL------DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
RM FL D V+ I CG H LAL+ G V SWG+ GQLG+ + + P+
Sbjct: 82 RMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQL-PK 140
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+R L VVQI+ G HS A T G LY+WG N GQ+GV DL H +P+ +
Sbjct: 141 VVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-THCNYPLRLTT 199
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + +ACG H+ + +++G G N QL +
Sbjct: 200 LL---GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 237
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDAN 71
++ +P + + V IACG +H LALT G ++SWG+ GQLG P+ T N
Sbjct: 133 KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCN 192
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P + L G+ + I+ GG HS ++ G ++ WG NN GQ+G ++D
Sbjct: 193 Y-PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG--------LNDETNR 243
Query: 132 SWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
S+ + + + V VACG ++ L ++ ++ CG Y QL G G S ++ R+
Sbjct: 244 SYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL--GHGFSSNEMLPRM 300
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 80/174 (45%), Gaps = 11/174 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP-REIR 78
PS++ D V +ACG H L LT G V++ G+ QLG+ M P I
Sbjct: 31 PSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIP 90
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L ++QI G HS A + G + +WG N+ GQ+G + +V P +
Sbjct: 91 ELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKE-IVQLPKVVR-----Q 144
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
VV +ACG+ H+LAL L+ G N Y QL GV+ + +T + P
Sbjct: 145 LVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL----GVNSPNDLTHCNYP 194
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 19/143 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L + + IACG +H +++ G VF WG + GQLG + P +++
Sbjct: 194 PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKT 251
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L LGV ++ G S T +G ++ G GQ+G H S +E
Sbjct: 252 LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG------------HGFSSNEMLPR 299
Query: 140 QNIK-----VVDVACGSRHTLAL 157
++ + VACG+RHTLAL
Sbjct: 300 MVMELMGSTITQVACGNRHTLAL 322
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ L V +ACG + + LT EG VF+ G G+ GQLG+ S + M PR +
Sbjct: 246 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE--MLPRMVME 303
Query: 80 LSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVV 125
L G + Q++ G H+ A G +YA+G + GQ+G L++
Sbjct: 304 LMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLML 350
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
LY WG + GQ+G+ G D + P + W+ D V VACG RHTL L +
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPD-----TAVQQVACGHRHTLFLTATGKV 61
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
+ CG N+Y+QL + + L +PE
Sbjct: 62 YACGSNDYSQLGHDLPTKRPRMSPFLLIPE 91
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ S GQLG + + P +I V Q++ G H+ T G +YA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ Q+G DL P + + Q+ ++ + CGSRH+LAL D + G N
Sbjct: 67 NDYSQLG----HDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 122
Query: 170 EYNQL 174
+ QL
Sbjct: 123 DCGQL 127
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 24/173 (13%)
Query: 20 PSRMDHFLDLVVTDIACG--FDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P+ + D + +ACG + H L +T +G V+SWG+G G+LG G+D + PR I
Sbjct: 610 PTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLG--RGGSDGSKLPRLI 667
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L + +VQ+ G S A ++DG +Y WG G ++G HP + F
Sbjct: 668 EKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLG------------HPTEENVRF 715
Query: 138 DS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
++ KVV V+ G H LAL D ++G G NE Q+ C S++ V
Sbjct: 716 PEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQI---CDSSELFV 765
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 87/172 (50%), Gaps = 17/172 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ ++ + + IA G HCLAL+ + V+SWG G G+LG+ A P+
Sbjct: 3945 VPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGH--GNRLACETPKL 4002
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL G ++ I+ GG HSAA T G LY WG G++G D + P E
Sbjct: 4003 IEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQL----KPKLIEEL 4058
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVSQ 182
KV+DVACGS TL + DD+++W G +Y +L S GC V +
Sbjct: 4059 V---GYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPK 4107
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 92/181 (50%), Gaps = 15/181 (8%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
H LALT++ V+SWGNG G+LG+ + T EP I+AL G ++ + GG +SAA +
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHGDTSTKE--EPTLIQALKGKDIIDVECGGTYSAAIS 583
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RHTLAL 157
+G LY WG N G++G D + P S D IK VACGS HTL +
Sbjct: 584 ANGALYTWGRGNYGRLGHGTAEDCLT----PTMISALSDEHIIK---VACGSFYAHTLCI 636
Query: 158 CDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPE 217
++ G +Y +L G G S S + RL E ++N IV+++ S LS
Sbjct: 637 TSQGKVYSWGDGDYGKL--GRGGSDGSKLPRLI--EKLQNVKIVQVYCGAQFSVALSEDG 692
Query: 218 H 218
H
Sbjct: 693 H 693
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P +++ L V + CG +ALT+ G V++WG G +LG+ GT ++ P+++
Sbjct: 4105 VPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH---GTGEHVRRPKKV 4161
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G ++ I+ G H A + +G ++ WG N+ GQ+G + + P +S
Sbjct: 4162 AALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTT--NAIQRPRLVS----- 4214
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
Q K+ +VACGS HTLA +N+ C
Sbjct: 4215 ALQGKKITNVACGSAHTLAWSTNNASSACA 4244
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
P + V+ +A G H +ALT +G VFSWG G G+LG+ G N++ P+
Sbjct: 2970 PRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH---GNRLNLDKPKM 3026
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL + I+ G HSAA T G LY WG G++G H +
Sbjct: 3027 IEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLG---------HGDNITQLKPK 3077
Query: 137 FDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCGV 180
+ ++V VACGSR TLAL D+ ++ G ++ +L S GC +
Sbjct: 3078 LIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNI 3129
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ + V D+ACG L +T + V+SWG+G G+LG G+D P++I
Sbjct: 4052 PKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLG--RGGSDGCKVPKKI 4109
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+GLGV+++ G S A T+ G +Y WG + ++G G + H P +
Sbjct: 4110 ESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLG-HGTGE---HVRRPKKVAA-- 4163
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
Q K++ +A GS H +A D+ ++ G N+ QL
Sbjct: 4164 -LQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQL 4199
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ L V I CG LALT+ G V++WG G +LG+ G+D ++ +P
Sbjct: 3128 NIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGH---GSDQHVRKPTV 3184
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L V+ ++ G H A T G +YAWG N+ GQ G +V P + ED
Sbjct: 3185 IESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTIVNRKPALVHGLED 3242
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ + VACGS H++A
Sbjct: 3243 -----VHINRVACGSSHSIA 3257
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + + + +ACG LALT EG VFSWG+G G+LG G++ P I
Sbjct: 3076 PKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLG--RGGSEGCNIPHNI 3133
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ L VVQI G S A T+ G ++ WG + ++G G D V P + +D
Sbjct: 3134 ERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLG-HGS-DQHVRKPTVIESLKD- 3190
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
KV+ VA G+ H LA+ D ++ G N++ Q G +
Sbjct: 3191 ----KKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTI 3229
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P + D L IA G ++ EG +++ G G+ G+LG G N+ PR I
Sbjct: 2917 LPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGL---GHSNNVPYPRPI 2973
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
LS + V + +GG H+ A T DG +++WG G++G +L+L D M E
Sbjct: 2974 PFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNL---DKPKM--IE 3028
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S+ I+ D+ACGS H+ A+ L+ G EY +L G ++Q+
Sbjct: 3029 ALRSKKIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLK 3075
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P ++ ++ + + CG +AL+++G V++WG G +LG+P T+ N+ P +
Sbjct: 663 LPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHP---TEENVRFPEMV 719
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L VV +S G H A T G +Y WG N Q+ +L V P + E
Sbjct: 720 EVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSS--ELFVQQPRLI---EAL 774
Query: 138 DSQNIKVVDVACGSRHTLALCDDN 161
Q KVV V CG + A DDN
Sbjct: 775 KGQ--KVVGVCCGPAQSFAWTDDN 796
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 79/149 (53%), Gaps = 23/149 (15%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ D+ CG + A++ G +++WG G+ G+LG+ ++ + + P I ALS +++++
Sbjct: 569 IIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTA--EDCLTPTMISALSDEHIIKVAC 626
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEG----KLDLVVHDPHPMSWSEDFDSQNIKV 144
G + H+ T G +Y+WG + G++G G KL ++ QN+K+
Sbjct: 627 GSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIE-----------KLQNVKI 675
Query: 145 VDVACGSRHTLALCDDNSLW----GCGWN 169
V V CG++ ++AL +D ++ G GW
Sbjct: 676 VQVYCGAQFSVALSEDGHVYTWGKGEGWK 704
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ + DIACG H A+T G +++WG G G+LG+ S + ++P+ I
Sbjct: 3998 ETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDS--EDQLKPKLI 4055
Query: 78 RALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
L G V+ ++ +G + T D +++WG + G++G G V P +
Sbjct: 4056 EELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV--PKKIE--- 4110
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
+ V+ V CGS+ ++AL S++ G +Y++L G G
Sbjct: 4111 --SLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTG 4152
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P D +L + I C L LTQ G VF Y SS T P+E+
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVF---------FMYYSSDTQC---PQEMTG 509
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LSG+ +++I+A G H A T+D +Y+WG +GG++G G +P + +
Sbjct: 510 LSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLG-HGDTS-TKEEPTLIQALKGK 567
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
D ++DV CG ++ A+ + +L+ G Y +L G
Sbjct: 568 D-----IIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTA 604
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q P+ ++ D V +A G HCLA+T G V++WG+ GQ G + T N +P
Sbjct: 3177 QHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTIVNRKP 3234
Query: 75 REIRALSGLGVVQISAGGWHSAA 97
+ L + + +++ G HS A
Sbjct: 3235 ALVHGLEDVHINRVACGSSHSIA 3257
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 11/161 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + L + G A+T +G V++ G GTD+ + P +
Sbjct: 3893 IPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYA--TGYGAGGRLGIGGTDSVLVPTLLE 3950
Query: 79 ALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + +I+ +GG H A + D +Y+WG + G++G +L P + +
Sbjct: 3951 SIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRL--ACETPKLIEALQG 4008
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ ++D+ACG H+ A+ L+ G Y +L G
Sbjct: 4009 YE-----IIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHG 4044
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P ALS L VQ+ G A T DG +YA
Sbjct: 3870 GTIYGWGHNHRGQLG-GIEGAKVKI-PTPCEALSTLRPVQLVGGEQTLFAVTADGKVYAT 3927
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G ++V + E IK + V G +H LAL DN ++ G
Sbjct: 3928 GYGAGGRLGIGGTDSVLVP-----TLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWG 3982
Query: 168 WNEYNQLSMG 177
+ +L G
Sbjct: 3983 EGDDGKLGHG 3992
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 2858 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 2915
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 2916 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQL--KPKLV 2973
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVDVACGS TL L +D+++W G +Y +L G
Sbjct: 2974 EA-----LQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRG 3016
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 25/184 (13%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 3022 KVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 3079
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 3080 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 3133
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
Q KV VACGS HTLA W+ S G +QV + H+++
Sbjct: 3134 -LQGKKVNRVACGSAHTLA-----------WSTSKPASAGKLPAQVPMEY-----SHLQD 3176
Query: 198 CPIV 201
P+V
Sbjct: 3177 LPVV 3180
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P ++ VV +A G H ALT +G VFSWG G G+LG+ S +PR
Sbjct: 1870 VPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXN--CDKPRL 1927
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL + I+ G HSAA T G LY WG G++G H +
Sbjct: 1928 IEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------HGDNTTQLKPK 1978
Query: 137 FDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCGVSQ 182
+ +VV VACGSR TLAL D+ ++ G ++ +L S GC V Q
Sbjct: 1979 MVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQ 2032
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 1815 IKVPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPV--PR 1872
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
++ ALS V V + +GG H+ A T DG +++WG + G++G + + P +
Sbjct: 1873 QVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXN--CDKPRLI-- 1928
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E S+ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 1929 -EALKSRRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 1975
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 13/156 (8%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG LALT EG+VFSWG+G G+LG G++ P+ I L+G GV QI
Sbjct: 1988 VVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNVPQNIERLNGQGVCQI 2045
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D+ V P + + K+V VA
Sbjct: 2046 ECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE-----GLRGKKIVHVA 2098
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 2099 VGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 2132
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 1925 PRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 1982
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VVQ++ G + A T +G +++WG + G++G G V P + E
Sbjct: 1983 LVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNV--PQNI---ERL 2037
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 2038 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2078
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT++ V+SWG+G G+LG G+D P ++ AL+GLG V++
Sbjct: 2981 VVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLG--RGGSDGCKVPMKVDALTGLGAVKV 3038
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 3039 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 3091
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 3092 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3120
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 2029 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 2085
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 2086 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 2140
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 2141 LEGQ--KITRVACGSSHSVA 2158
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 2918 PRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 2975
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV ++ +G + T+D +++WG + G++G G V PM
Sbjct: 2976 LQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKV----PMKVDA-- 3029
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V V CGS+ ++AL +++ G +Y++L G
Sbjct: 3030 -LTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3068
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 72/164 (43%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G V+ WG+ RGQLG G + P AL+ L Q+ G A T DG LYA
Sbjct: 2788 GTVYGWGHNHRGQLGG-VEGAKVKV-PTPCEALAALRPAQLIGGEQTLFAVTADGKLYAT 2845
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 2846 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 2900
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 2901 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 2940
>gi|291401444|ref|XP_002717009.1| PREDICTED: hect domain and RLD 3-like [Oryctolagus cuniculus]
Length = 974
Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/155 (36%), Positives = 77/155 (49%), Gaps = 30/155 (19%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY----PSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG S GQLG PS T P+ + L+G+ +V
Sbjct: 130 IIQITCGDYHSLALSKGGELFAWGQNSHGQLGIGVMCPSVPT-----PQIVEHLAGVPLV 184
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS------- 139
QISAG HS + G +Y+WG N+ GQ+G + +E+ DS
Sbjct: 185 QISAGEAHSMTLSMSGNVYSWGKNDLGQLG--------------LGHTENKDSPCLIEAL 230
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
N KV VACG HT L D L+ G +Y QL
Sbjct: 231 DNQKVEFVACGGSHTALLTQDGQLFTFGAGKYGQL 265
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H + L+ G V+SWG GQLG T+ P I A
Sbjct: 172 PQIVEHLAGVPLVQISAGEAHSMTLSMSGNVYSWGKNDLGQLGL--GHTENKDSPCLIEA 229
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
L V ++ GG H+A TQDG L+ +G GQ+G + K
Sbjct: 230 LDNQKVEFVACGGSHTALLTQDGQLFTFGAGKYGQLGHKSK 270
Score = 45.8 bits (107), Expect = 0.017, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG 91
+ACG H LTQ+G +F++G G GQLG+ S + ++PR + L V QI+ G
Sbjct: 238 VACGGSHTALLTQDGQLFTFGAGKYGQLGHKSKRNE--LKPRLVTVLVANRVTQIACG 293
Score = 40.8 bits (94), Expect = 0.46, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q ++ + CG H+LAL L+ G N + QL G GV SV T + EH+ P
Sbjct: 126 QEKTIIQITCGDYHSLALSKGGELFAWGQNSHGQL--GIGVMCPSVPTP-QIVEHLAGVP 182
Query: 200 IVKLFAEHWNSARLSV 215
+V++ A +S LS+
Sbjct: 183 LVQISAGEAHSMTLSM 198
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H + LT +G V++WG + GQ+G SG+ AN PR + + L VV I
Sbjct: 135 VIEVACGSHHSMVLTSDGEVYTWGYNNSGQVG---SGSTANQPIPRRVTSCLQNKIVVNI 191
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A ++G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 192 ACGQMCSMAVVENGEVYVWGYNGNGQLG----LGSSGNQPTPCRIAA---LQGIRVQRVA 244
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 245 CGYAHTLVLTDEGQIYAWGANSYGQLGTG 273
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T+EG V++WG+ + QLG + T+ P ++
Sbjct: 70 PRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLG--NGTTNHGFVPCQVS 127
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L V++++ G HS T DG +Y WG+NN GQVG + P P +
Sbjct: 128 TNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS----TANQPIPRRVTSCL 183
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ ++ ++ G+N QL +G
Sbjct: 184 --QNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 221
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + +V +IACG +A+ + G V+ WG GQLG SSG P I
Sbjct: 175 IPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPT--PCRI 232
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + +P + D
Sbjct: 233 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSN----QSYPTTVVVDK 288
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
D +V+++ AC S HT A
Sbjct: 289 D----RVIEIAACHSAHTSA 304
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG +++WG S GQLG +G +N
Sbjct: 229 PCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG---TGNKSNQSYPTTVV 285
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ V++I+A SAA+TQ G +Y WG G V
Sbjct: 286 VDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSV 323
>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
Length = 461
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS P
Sbjct: 9 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPS-----QTSP 63
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 64 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 120
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ KVV ++CG HT L ++ G QL G
Sbjct: 121 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHG 159
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 63 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 120
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G G ++ + +P E S
Sbjct: 121 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG-HGSMN---DEVNPRRVLELMGS 176
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 177 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 204
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 126 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVN--PRRVLELMGSEVTQIAC 183
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 184 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKY 243
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQ 173
+VV + G T LC +NS + NQ
Sbjct: 244 RVVKQIFSGGDQTFVLCSTYENSSPAVDFRTVNQ 277
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
D+ PR I+ L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P
Sbjct: 5 DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------P 58
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
S + I + VA G H+ AL +++G G N QL +
Sbjct: 59 SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 106
>gi|345491150|ref|XP_001607453.2| PREDICTED: hypothetical protein LOC100123748 [Nasonia vitripennis]
Length = 707
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 80/153 (52%), Gaps = 22/153 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE-IRALSGLGVVQIS 89
+TD+ACG+D +ALT+EG VF WG+ S GQLG D EPR+ + + G +IS
Sbjct: 95 ITDVACGWDSSMALTREGDVFVWGSNSHGQLGLRD--VDKVSEPRKLVGEVDGRKFQRIS 152
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVE------GKLDLVVHDPHPMSWSEDFDSQNIK 143
G HSA + DG L G +N GQ+GV+ + L V D P
Sbjct: 153 MGLRHSAIVSTDGELLVSGASNKGQLGVDLQGARCSESFLTVSDLPP------------- 199
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
V +VAC HT+A+ DN L+ G N++ QL +
Sbjct: 200 VREVACAQHHTVAISRDNQLFAWGDNKHGQLGI 232
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREI----RALSGLGVVQISAGGWHSAARTQDGFLY 105
++SWG S GQLG D + PR++ A+ V+++ G H+ Q G ++
Sbjct: 6 LYSWGANSHGQLGLGDIKEDEVLAPRKVCVFPSAMRLDEVIKMVGGAGHTLFLDQRGQVF 65
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLW 164
+ GWN+ GQ GV P S + ++ N ++ DVACG ++AL + ++
Sbjct: 66 SCGWNDKGQAGV----------PTCSSTFQKVEALSNERITDVACGWDSSMALTREGDVF 115
Query: 165 GCGWNEYNQLSM 176
G N + QL +
Sbjct: 116 VWGSNSHGQLGL 127
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
VF R+D + +V G H L L Q G VFS G +GQ G P+ + +
Sbjct: 35 VFPSAMRLDEVIKMV-----GGAGHTLFLDQRGQVFSCGWNDKGQAGVPTCSSTF----Q 85
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
++ ALS + ++ G S A T++G ++ WG N+ GQ+G+ +D V P
Sbjct: 86 KVEALSNERITDVACGWDSSMALTREGDVFVWGSNSHGQLGLRD-VDKV---SEPRKLVG 141
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ D + K ++ G RH+ + D L G + QL
Sbjct: 142 EVDGR--KFQRISMGLRHSAIVSTDGELLVSGASNKGQL 178
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4032 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4089
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4090 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4147
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q VVDVACGS TL L DD+++W G +Y +L G
Sbjct: 4148 EA-----LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4190
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4196 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4253
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4254 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4307
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4308 -LQGKKVNRVACGSAHTLA 4325
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2988 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3045
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3046 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3101
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3102 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3148
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3034 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3093
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3094 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3141
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3142 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3201
Query: 179 GVSQ 182
+ Q
Sbjct: 3202 NIPQ 3205
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3150 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3207
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3208 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3260
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3261 GLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 3305
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + P+ + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PVLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4155 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4212
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4213 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4265
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4266 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4294
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3098 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3155
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3156 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3210
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3211 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3251
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3202 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3258
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3259 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3313
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3314 LEGQ--KITRVACGSSHSVA 3331
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PVLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQ 688
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4092 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4149
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV ++ +G + T D +++WG + G++G G V PM
Sbjct: 4150 LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4201
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4202 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4242
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3962 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4019
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4020 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4074
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4075 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4114
>gi|410957218|ref|XP_003985228.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Felis catus]
Length = 932
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 30/167 (17%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 9 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 63
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G +S
Sbjct: 64 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG--------------LSDE 109
Query: 135 EDFDS-------QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
ED +S + KVV ++CG HT L ++ G QL
Sbjct: 110 EDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 156
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S + P ++
Sbjct: 63 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKL 120
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 121 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 176
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 177 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 204
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 126 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 183
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 184 GRQHTLAFVPSSGLIYAFGCGARGQLGT 211
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
D+ PR I+ L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P
Sbjct: 5 DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------P 58
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
S + I + VA G H+ AL +++G G N QL +
Sbjct: 59 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 106
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4025 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4082
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4083 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4140
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
Q VVDVACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 4141 EA-----LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 4195
Query: 185 VMTRLSV 191
+T L V
Sbjct: 4196 SLTGLGV 4202
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4246
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4247 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4300
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4301 -LQGKKVNRVACGSAHTLA 4318
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2981 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3038
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3039 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3094
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3095 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3027 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3086
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3087 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3134
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3135 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194
Query: 179 GVSQ 182
+ Q
Sbjct: 3195 NIPQ 3198
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3200
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3253
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3254 GLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 3298
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + P+ + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PVLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4205
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4206 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4258
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4259 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4287
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3148
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3203
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3204 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3251
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3306
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3307 LEGQ--KITRVACGSSHSVA 3324
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PVLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQ 688
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4085 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4142
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV ++ +G + T D +++WG + G++G G V PM
Sbjct: 4143 LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4194
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4195 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4235
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3955 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4013 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4067
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4068 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4107
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H + LT +G V++WG + GQ+G SG+ AN PR + + L VV I
Sbjct: 130 VIEVACGSHHSMVLTSDGEVYTWGYNNSGQVG---SGSTANQPIPRRVTSCLQNKIVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A ++G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 187 ACGQMCSMAVVENGEVYVWGYNGNGQLG----LGSSGNQPTPCRIAA---LQGIRVQRVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 240 CGYAHTLVLTDEGQIYAWGANSYGQLGTG 268
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T+EG V++WG+ + QLG + T+ P ++
Sbjct: 65 PRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLG--NGTTNHGFVPCQVS 122
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L V++++ G HS T DG +Y WG+NN GQVG + P P +
Sbjct: 123 TNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS----TANQPIPRRVTSCL 178
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ ++ ++ G+N QL +G
Sbjct: 179 --QNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 216
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + +V +IACG +A+ + G V+ WG GQLG SSG P I
Sbjct: 170 IPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPT--PCRI 227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + +P + D
Sbjct: 228 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSN----QSYPTTVVVDK 283
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
D +V+++ AC S HT A
Sbjct: 284 D----RVIEIAACHSAHTSA 299
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG +++WG S GQLG +G +N
Sbjct: 224 PCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG---TGNKSNQSYPTTVV 280
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ V++I+A SAA+TQ G +Y WG G V
Sbjct: 281 VDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSV 318
>gi|355778311|gb|EHH63347.1| RCC1 domain-containing protein 1 [Macaca fascicularis]
Length = 262
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 85/191 (44%), Gaps = 36/191 (18%)
Query: 18 HMPSRMDHFLDLVVTDIA---CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
H PS + +D+ + F L L G VFSWG G GQLG+ + +A +EP
Sbjct: 30 HSPSPLRAGVDVCRVSASWSYTAFVTRLLLDAAGQVFSWGGGRHGQLGHGT--LEAELEP 87
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV------------------- 115
R + AL GL + +++AGGWHS ++ G +Y WGWN GQ+
Sbjct: 88 RLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT 147
Query: 116 -----GVEGKLDLVVHD--PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSL 163
G + K V D P P + F + V V+CGSRHT + L
Sbjct: 148 GLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGEL 207
Query: 164 WGCGWNEYNQL 174
+ GW +Y QL
Sbjct: 208 YTWGWGKYGQL 218
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 47/174 (27%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ L + ++A G H + +++ G ++ WG GQL P+ D RE
Sbjct: 87 PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 146
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G V++S G H+A T+ G
Sbjct: 147 TGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGE 206
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS---EDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E D + W E F + ++V V CG +T
Sbjct: 207 LYTWGWGKYGQLGHE--------DTTSLDWPRRVEYFVDKQLQVKTVTCGPWNT 252
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG H +AL+ +G +FSWG GS GQLG ++ DA PR I+ L+ ++Q+S
Sbjct: 86 IVHVACGESHSVALSDQGQLFSWGAGSDGQLGL-TTIEDAVTVPRLIKKLNQQTILQVSC 144
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G WH A DG + WG N+ GQ+G+ GK P S I + VA G
Sbjct: 145 GNWHCLALAADGQFFTWGQNSYGQLGL-GK-----ECPSQASPQRVKSLDGIPLAQVAAG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ AL +++G G N QL +
Sbjct: 199 GAHSFALSLSGAVFGWGKNSSGQLGL 224
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G+ +P +I AL+G +V
Sbjct: 33 DRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS----KPEQIGALAGQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVT-VPRLI---KKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N Y QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLG 172
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L + +P + + ++CG HCLAL +G F+WG S GQLG
Sbjct: 118 LTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGL-GKECP 176
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ P+ +++L G+ + Q++AGG HS A + G ++ WG N+ GQ+G+ + D
Sbjct: 177 SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDE-----RDRE 231
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ KVV ++CG HT L ++ G QL
Sbjct: 232 SPCHVKLLRSQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG S GQLG S P ++
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL--SDERDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG HTLA + + +GCG
Sbjct: 295 E---VSQIACGRHHTLAFVPSSGMIYAFGCG 322
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVSQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-------SEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P W S D+
Sbjct: 302 GRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKY 361
Query: 143 KVVD-VACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSV 185
+V + G T LC +NSL + N+ C ++ ++
Sbjct: 362 HIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETI 407
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 15/145 (10%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G S+ EP+ + V +++ GG HS +DG +Y G N
Sbjct: 4 WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G HD + +V VACG H++AL D L+ G
Sbjct: 64 GQLG---------HDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKN 197
QL + ++ ++VP +K
Sbjct: 115 QLGL------TTIEDAVTVPRLIKK 133
>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
Length = 923
Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats.
Identities = 55/149 (36%), Positives = 77/149 (51%), Gaps = 18/149 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ I CG H LAL++ G +F+WG GQLG D+ P+ + LSG+ + QISA
Sbjct: 38 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGV-GKIFDSTTAPQIVEHLSGVPLAQISA 96
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-----QNIKVV 145
G HS A + G +Y+WG N+ GQ+G+ G D +DF S +N KV
Sbjct: 97 GKSHSMALSVSGNIYSWGRNDFGQLGL-GHTD-----------DKDFPSLIEALENQKVE 144
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ACG HT L D ++ G +Y QL
Sbjct: 145 FLACGGSHTALLTKDGLVFTFGAGKYGQL 173
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG TD P I A
Sbjct: 80 PQIVEHLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGL--GHTDDKDFPSLIEA 137
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG H+A T+DG ++ +G GQ+G + + P ++ +
Sbjct: 138 LENQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQN----ELRPCLVTKLAGN 193
Query: 140 QNIKVVDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMG 177
+V VACG +HTLA D ++ G E QL G
Sbjct: 194 ---RVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQLGNG 229
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ + V +ACG H LT++G+VF++G G GQLG+ S T + P +
Sbjct: 132 PSLIEALENQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNS--TQNELRPCLVTK 189
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L+G V Q++ G H+ A D G ++++G GQ+G G + ++ P + +E+
Sbjct: 190 LAGNRVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIPLPMKLPSNEELK 249
Query: 139 SQN 141
+N
Sbjct: 250 FEN 252
Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q ++ + CG H+LAL L+ G N + QL +G T + EH+ P
Sbjct: 34 QEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG---KIFDSTTAPQIVEHLSGVP 90
Query: 200 IVKLFAEHWNSARLSV 215
+ ++ A +S LSV
Sbjct: 91 LAQISAGKSHSMALSV 106
>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
Length = 1024
Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 80/151 (52%), Gaps = 22/151 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG +PS+ T P+ + L+G+ +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTT-----PQIVEHLAGVPLA 194
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDFDSQNIK 143
QISAG HS A + G +Y+WG N GQ+G+ E K DP S E D+Q K
Sbjct: 195 QISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESK-----DDP---SLIEGLDNQ--K 244
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V VACG H+ L D L+ G ++ QL
Sbjct: 245 VEFVACGGSHSALLTQDGLLFTFGAGKHGQL 275
Score = 70.1 bits (170), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ + V +ACG H LTQ+G++F++G G GQLG+ S T + P +
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS--TQNELRPCLVAE 291
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V QI+ G WH+ A D G ++++G GQ+G G D ++ P +S SE+
Sbjct: 292 LVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEEL 350
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H AL+ G ++SWG GQLG T++ +P I
Sbjct: 182 PQIVEHLAGVPLAQISAGEAHSTALSMSGNIYSWGKNECGQLGL--GHTESKDDPSLIEG 239
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG HSA TQDG L+ +G GQ+G + + P +E
Sbjct: 240 LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQN----ELRPCLVAELV-- 293
Query: 140 QNIKVVDVACGSRHTLALCDD 160
+V +ACG HTLA D
Sbjct: 294 -GYRVTQIACGRWHTLAYVSD 313
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q K++ + CG H+LAL L+ G N + QL +G + T + EH+ P
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG---RKFPSTTTPQIVEHLAGVP 192
Query: 200 IVKLFAEHWNSARLSV 215
+ ++ A +S LS+
Sbjct: 193 LAQISAGEAHSTALSM 208
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
VT++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L VV I
Sbjct: 154 VTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVVNI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I++ VA
Sbjct: 211 ACGQMCSMAVVNTGEVYVWGYNGNGQLG----LGSSGNQPTPCRIAA---LQGIRIQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ IV++ A H
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPAPVVVEKDRIVEIAACH 317
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V +++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 147 TNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS----GSTANQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ + ++ G+N QL +G
Sbjct: 203 --QNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLG 240
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG P I
Sbjct: 194 IPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPT--PCRI 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ + +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 252 AALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PAPVVVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
++V++ AC S HT A
Sbjct: 309 -----RIVEIAACHSAHTSA 323
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPAPVV 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +V+I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 342
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + ALSG
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDALSGK 98
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 152
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V +VACGS H+L L D ++ G+N Q+ G +Q +P V C
Sbjct: 153 QVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-------PIPRRVTGC 201
>gi|350408000|ref|XP_003488267.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 534
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + DIACG H LALT EG V++WG + GQ+G S + N + +L+G V+
Sbjct: 128 DEFIVDIACGSHHSLALTNEGKVYAWGENTSGQVG-KSVNINENTPMKVNSSLAGKTVIC 186
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
IS G S T G +Y WG N+ GQ+G+ ++ V DP ++ + + +
Sbjct: 187 ISCGQSSSMTVTDTGKVYGWGCNDVGQLGIGNYVNQV--DPCKVTM-----LAGVVIEKI 239
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG H LAL + +L+ G N Y QL +G
Sbjct: 240 VCGYAHVLALSNKGALYVWGGNNYGQLGLG 269
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 10/145 (6%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RALSGLGVVQISAGGWHSAAR 98
H LALT+EG V+SWG+ S G+LG + NM P + R LS +V I+ G HS A
Sbjct: 88 HVLALTEEGKVYSWGHNSHGELGNCFAN---NMIPMLVTRNLSDEFIVDIACGSHHSLAL 144
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T +G +YAWG N GQVG + +++ PM + + V+ ++CG ++ +
Sbjct: 145 TNEGKVYAWGENTSGQVGK----SVNINENTPMKVNSSLAGKT--VICISCGQSSSMTVT 198
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQV 183
D ++G G N+ QL +G V+QV
Sbjct: 199 DTGKVYGWGCNDVGQLGIGNYVNQV 223
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQISAG-GWHSA 96
+ L +T++ IV++ G+ + G LG +G D N P+++ AL G + + G G H
Sbjct: 34 NEALIITRDKIVYALGSNTSGCLG---TGDDCNTFYPKKVEALCGKDIKTFAYGKGPHVL 90
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
A T++G +Y+WG N+ G++G + ++ PM + + + I VD+ACGS H+LA
Sbjct: 91 ALTEEGKVYSWGHNSHGELG-----NCFANNMIPMLVTRNLSDEFI--VDIACGSHHSLA 143
Query: 157 LCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
L ++ ++ G N Q+ +++ + M
Sbjct: 144 LTNEGKVYAWGENTSGQVGKSVNINENTPM 173
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P ++ +V+ I CG+ H LAL+ +G ++ WG + GQLG G N+ P +++
Sbjct: 225 PCKVTMLAGVVIEKIVCGYAHVLALSNKGALYVWGGNNYGQLGL---GMKMNICSPVQLK 281
Query: 79 ALSGLGVVQISAGGWH--SAARTQDGFLYAWG 108
+ V+ ++ ++ S A + ++ WG
Sbjct: 282 QEAMRRVLDVATSHYNHISIAMAEGNRIFMWG 313
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 86/165 (52%), Gaps = 23/165 (13%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + +A G +H LALT +G VF+WG S GQLG S+ D+++ P +++ L V
Sbjct: 172 DSTIKVVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNST-VDSSI-PVQVQGLPA-NVTA 228
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD------LVVHDPHPMSWSEDFDSQN 141
++AGG HS A T DG +YAWG N+ GQ+G +G LV P
Sbjct: 229 VAAGGNHSLALTSDGRIYAWGLNSSGQLG-DGTTSNSSTPVLVAGLPA-----------G 276
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
K V V+ G H+LAL D +++ G N Y QL G G + S M
Sbjct: 277 SKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQL--GNGTTTASEM 319
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQ-I 88
V ++ G H LALT +G VF+WG S GQLG GT A+ P +++ L+ ++ +
Sbjct: 122 VAQVSAGESHSLALTDDGRVFAWGLNSSGQLG---DGTTADSRTPVQVQGLATDSTIKVV 178
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+AGG HS A T DG ++AWG N+ GQ+G +D S V VA
Sbjct: 179 AAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVD--------SSIPVQVQGLPANVTAVA 230
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
G H+LAL D ++ G N QL G
Sbjct: 231 AGGNHSLALTSDGRIYAWGLNSSGQLGDGT 260
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++ G DH LAL Q+G V++WG S GQLG + T A+ P ++ L+ V +SAGG
Sbjct: 282 VSAGKDHSLALMQDGTVYAWGGNSYGQLG--NGTTTASEMPVQVTGLAN--VTAVSAGGS 337
Query: 94 HSAARTQDGFLYAWGWNNGGQVG 116
S A T DG++YAWG N+ GQ+G
Sbjct: 338 DSLALTSDGYVYAWGLNSSGQLG 360
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 75/167 (44%), Gaps = 19/167 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++ G H L LT + V++WG+ + GQLG T P + L V Q+SAG
Sbjct: 75 VSAGGSHSLVLTSDQTVWAWGDNTNGQLG--DGTTTGRQTPTPAQGLPS--VAQVSAGES 130
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH-PMSWSEDFDSQNIKVVDVACGSR 152
HS A T DG ++AWG N+ GQ+G D D P+ IKV VA G
Sbjct: 131 HSLALTDDGRVFAWGLNSSGQLG-----DGTTADSRTPVQVQGLATDSTIKV--VAAGGN 183
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
H+LAL D ++ G N QL V S+P V+ P
Sbjct: 184 HSLALTSDGRVFAWGKNSSGQLGNNSTVDS-------SIPVQVQGLP 223
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSWSEDFDS 139
LG +SAGG HS T D ++AWG N GQ+G G+ P P ++ S
Sbjct: 70 LGEAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGR-----QTPTP---AQGLPS 121
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
V V+ G H+LAL DD ++ G N QL G
Sbjct: 122 ----VAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGT 156
>gi|427795769|gb|JAA63336.1| Putative e3 ubiquitin-protein ligase herc2, partial [Rhipicephalus
pulchellus]
Length = 561
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 15/180 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQIS 89
V +ACG H LALT G V++WG + GQ+G S T PR++ + + G + ++
Sbjct: 160 VAQVACGSHHSLALTTNGDVYAWGQNNCGQVG--SGSTTNQPTPRKVSSGIGGRRCIGVA 217
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G S A ++G ++ WG+N GQ+G+ V+ P + + Q + + V C
Sbjct: 218 CGQTSSMAVMENGEVFGWGYNGNGQLGLGNN----VNQTSPCRVT---NLQGVVIHKVVC 270
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWN 209
G HT+AL D+ L+ G N Y QL G +QVS +P + IV++ A H+N
Sbjct: 271 GYAHTMALSDEGVLYTWGANSYGQLGTGNKANQVS---PFKMPTDIGR--IVEIAASHYN 325
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 40/183 (21%)
Query: 34 IACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----- 84
+AC F + L +TQ+ VF+ G+ S G LG T ++EPR++ AL G
Sbjct: 79 LACVFGSSGNEALMVTQDDDVFALGSNSSGCLGL--GDTHGSLEPRKVDALCRKGIHALA 136
Query: 85 -----------------------VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
V Q++ G HS A T +G +YAWG NN GQVG
Sbjct: 137 YGSGPHVLAVTESGELLXGLSHRVAQVACGSHHSLALTTNGDVYAWGQNNCGQVGSGS-- 194
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
+ P P S + + + VACG ++A+ ++ ++G G+N QL +G V+
Sbjct: 195 --TTNQPTPRKVSSGIGGR--RCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNVN 250
Query: 182 QVS 184
Q S
Sbjct: 251 QTS 253
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + +V+ + CG+ H +AL+ EG++++WG S GQLG +G AN + +
Sbjct: 254 PCRVTNLQGVVIHKVVCGYAHTMALSDEGVLYTWGANSYGQLG---TGNKAN-QVSPFKM 309
Query: 80 LSGLG-VVQISAGGWH--SAARTQDGFLYAWGWNNGGQVGV 117
+ +G +V+I+A ++ SA TQ +Y WG G V V
Sbjct: 310 PTDIGRIVEIAASHYNHISAVMTQTSRVYMWGQCRGQSVTV 350
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +D V +ACG H + L+++G V++WG G G+LG+ +G PR + A
Sbjct: 31 PVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGW--KYVPRIVEA 88
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS-WSEDFD 138
L G +VQ + G +H+AA T G LY WG G+ GKL HP +
Sbjct: 89 LEGQRIVQATCGSYHTAAVTDKGELYTWGG------GMYGKLGHGNESGHPTPCMVKHLR 142
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
+ +V +ACGSRHT+ L D ++ G E
Sbjct: 143 DEGARVTQIACGSRHTVVLTDLGKVYTWGDKE 174
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 20 PSRMDHFLD--LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + H D VT IACG H + LT G V++WG+ G +G+ ++ + PR +
Sbjct: 135 PCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYL-PRML 193
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L V Q++A G+H+AA T G ++ WG G++G + + +V P +
Sbjct: 194 ESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMV--PRMVEA---- 247
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+V VACG H+ A+ D L+ G E+ Q+
Sbjct: 248 -LMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQV 283
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 18 HMPSRMDHFLDLVVTDIA-CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPR 75
++P ++ VT +A CGF H ALT G +F+WG G G+LG+ G + N M PR
Sbjct: 188 YLPRMLESLQAKTVTQVAACGF-HTAALTAAGEIFTWGEGKFGRLGH---GMERNQMVPR 243
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD 122
+ AL G V ++ GG+HSAA G LY WG GQV G D
Sbjct: 244 MVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGD 290
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 17/134 (12%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G+V+SWG G GQLG T+ P + AL GVVQ++ G H+ ++DG +Y W
Sbjct: 7 GLVYSWGRGEDGQLGLGD--TNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTW 64
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSW----SEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
G + G++G H + + E + Q ++V CGS HT A+ D L
Sbjct: 65 GRGDDGRLG---------HGDNGWKYVPRIVEALEGQ--RIVQATCGSYHTAAVTDKGEL 113
Query: 164 WGCGWNEYNQLSMG 177
+ G Y +L G
Sbjct: 114 YTWGGGMYGKLGHG 127
>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
gi|194702086|gb|ACF85127.1| unknown [Zea mays]
gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
Length = 389
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P R++ DL + DIA G H ALT +G V++WG G G+LG+ ++M
Sbjct: 237 TQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGRLGF-GDDKSSHMV 295
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHD 127
P ++ L+G +VQ+S GG HS A +DG ++++G + G++G K ++L ++
Sbjct: 296 PLKVELLAGEDIVQVSCGGTHSVALARDGRMFSYGRGDHGRLGYGRKVTTGHPMELPINL 355
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
P P+S S D Q VACG RHTLA+ +
Sbjct: 356 P-PLSSSRDGRWQ---AKYVACGGRHTLAIAE 383
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 91/175 (52%), Gaps = 16/175 (9%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G +K +S P R+ + V IA G H LALT++ I+++WGN GQLG +
Sbjct: 185 GDIKQIS----TPVRVQGLEKVRV--IAVGAFHNLALTEDVILWAWGNNEYGQLG--TGD 236
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVH 126
T +P + LS L +V I+AGGWHS A T DG +YAWG G++G + K +V
Sbjct: 237 TQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGRLGFGDDKSSHMVP 296
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
+ ED +V V+CG H++AL D ++ G ++ +L G V+
Sbjct: 297 LKVELLAGED-------IVQVSCGGTHSVALARDGRMFSYGRGDHGRLGYGRKVT 344
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 99/242 (40%), Gaps = 56/242 (23%)
Query: 25 HFLDLV----VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
HF++ + VT + G + LA+ +G +F+WG RG LG+P T P + AL
Sbjct: 33 HFVEALGPYAVTAVVAGSRNSLAICDDGRLFTWGWNQRGTLGHPPE-TKTESSPGPVDAL 91
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD------------------ 122
+G +VQ + GGWH A G YAWG N GQ G E +
Sbjct: 92 AGFKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCA 151
Query: 123 ----------------LVVHDPHPMSWSEDFDSQNIKVVD-------------VACGSRH 153
++ + H +W + + +IK + +A G+ H
Sbjct: 152 LKLKVRQVAAGGTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFH 211
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARL 213
LAL +D LW G NEY QL G ++ E + + +V + A W+S L
Sbjct: 212 NLALTEDVILWAWGNNEYGQL----GTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTAL 267
Query: 214 SV 215
++
Sbjct: 268 TI 269
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V +WG+G GQLG G + P + AL V + AG +S A DG L+ WGW
Sbjct: 10 VLAWGSGEDGQLGM--GGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICDDGRLFTWGW 67
Query: 110 NNGGQVG--VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
N G +G E K + P P+ F K+V A G H LA+ D + G
Sbjct: 68 NQRGTLGHPPETKTE---SSPGPVDALAGF-----KIVQAAIGGWHCLAVDDKGRAYAWG 119
Query: 168 WNEYNQ 173
NEY Q
Sbjct: 120 GNEYGQ 125
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P + L + DIA G H ALT +G V+ WG G G+LG+ + + M
Sbjct: 234 TQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 293
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHD 127
P+ + L G +VQ+S GG HS A T+DG +Y +G + G++G K +++ +
Sbjct: 294 PQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKVTTGQPMEVPIDI 353
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
P P + ++ D+ VA G RHTLA+ +
Sbjct: 354 PPPKNLTDSGDAGRWIAKLVASGGRHTLAIVE 385
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G H LAL ++G +++WGN GQLG + T +P ++ LSGL +V I+AGGW
Sbjct: 202 IAVGAFHNLALQEDGTLWAWGNNEYGQLG--TGDTQPRSQPITVQGLSGLTLVDIAAGGW 259
Query: 94 HSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
HS A T DG +Y WG G++G K +V + ED +V V+CG
Sbjct: 260 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGED-------IVQVSCGG 312
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
H++AL D ++ G ++ +L G +V+ + VP
Sbjct: 313 THSVALTRDGRMYTFGRGDHGRLGYG---RKVTTGQPMEVP 350
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 52/231 (22%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G + LA+ +G +F+WG RG LG+P N+ P +++AL+ + +VQ +
Sbjct: 40 VRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTENI-PSQVKALANVNIVQAAI 98
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEG----------KLDLVV--------------- 125
GGWH A G YAWG N GQ G E + D+V+
Sbjct: 99 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAA 158
Query: 126 ---------HDPHPMSWSEDFDSQNIKVVDV-------------ACGSRHTLALCDDNSL 163
+ H SW + + +IK + V A G+ H LAL +D +L
Sbjct: 159 GGTHSVVLTREGHVWSWGQPWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTL 218
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
W G NEY QL G + +T + + +V + A W+S L+
Sbjct: 219 WAWGNNEYGQLGTGDTQPRSQPIT----VQGLSGLTLVDIAAGGWHSTALT 265
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 62/139 (44%), Gaps = 26/139 (18%)
Query: 44 LTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE----IRALSGLGVVQISAGGWHSAART 99
+ E V +WG+G GQLG N E +E ++AL V + AG +S A
Sbjct: 1 MATESSVIAWGSGEDGQLGI------GNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAIC 54
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ-----NIKVVDVACGSRHT 154
DG L+ WGWN G +G H P +E+ SQ N+ +V A G H
Sbjct: 55 DDGKLFTWGWNQRGTLG---------HPPETK--TENIPSQVKALANVNIVQAAIGGWHC 103
Query: 155 LALCDDNSLWGCGWNEYNQ 173
LA+ D + G NEY Q
Sbjct: 104 LAVDDQGRAYAWGGNEYGQ 122
Score = 36.6 bits (83), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 15/75 (20%)
Query: 104 LYAWGWNNGGQVGV----EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
+ AWG GQ+G+ E + +V P KV V GSR++LA+CD
Sbjct: 7 VIAWGSGEDGQLGIGNNEEKEWVCIVKALEPY-----------KVRSVVAGSRNSLAICD 55
Query: 160 DNSLWGCGWNEYNQL 174
D L+ GWN+ L
Sbjct: 56 DGKLFTWGWNQRGTL 70
>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
Length = 389
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 86/168 (51%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ +
Sbjct: 90 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR--SPC 147
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 148 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 205
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 206 E-----ALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 248
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 255 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 312
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 313 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVA-----A 365
Query: 139 SQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 366 LQGKKVNRVACGSAHTLA 383
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ V DIACG L LT + V+SWG+G G+LG G+D P +I
Sbjct: 202 PKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKI 259
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+GLGVV++ G S A T+ G +Y WG + ++G D H +
Sbjct: 260 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG-------SDDHVRRPRQVQ 312
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q KV+ +A GS H + +D ++ G N+ QL G
Sbjct: 313 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 352
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S + ++P+ + A
Sbjct: 150 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS--EDQLKPKLVEA 207
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 208 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 259
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 260 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 300
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 68/170 (40%), Gaps = 11/170 (6%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQD 101
L G ++ WG+ RGQLG G + P AL+ L VQ+ G A T D
Sbjct: 14 LYFQGSGTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 71
Query: 102 GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDN 161
G LYA G+ + V P + E IK V V G +H LAL +
Sbjct: 72 GKLYATGYGA--GGRLGIGGTESVSTPTLL---ESIQHVFIKKVAVNSGGKHCLALSSEG 126
Query: 162 SLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
++ G E +L G S R V E ++ +V + A +SA
Sbjct: 127 EVYSWGEAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 172
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L + +P + D+ + +ACG+ H AL++ G VFSWG GQLG G+
Sbjct: 118 LNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSS 177
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ P+ I++L G+ Q+SAGG HS A T G ++ WG N GQ+G+ D
Sbjct: 178 IST-PQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLND-----TKDRW 231
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
+ + SQ +V+ V+CG HT AL ++ G Y QL C
Sbjct: 232 FPALLKSLRSQ--RVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNC 278
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 12/169 (7%)
Query: 13 LSQVFHMPSRM--DHFLDL---VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
L Q+ H SR +H + L ++ ++CG H LAL +G VFSWG GS GQLG ++
Sbjct: 63 LGQLGHEKSRKKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGL-NNF 121
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
+ PR I+ LS + + Q++ G WHS A ++ G +++WG N GQ+G+ G +
Sbjct: 122 EECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGL-GMHGSSIST 180
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
P + Q I ++ G H+ A+ +++G G N++ QL +
Sbjct: 181 PQIIQ-----SLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGL 224
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + F V D+ CG H + L +G V++ G GQLG+ S +P + A
Sbjct: 25 PRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKS----RKKPEHVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +++WG + GQ+G+ + V P + D
Sbjct: 81 LDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGL-NNFEECVRVPRNIKCLSD--- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
+++ VACG H+ AL ++ G N++ QL +G S +S
Sbjct: 137 --VQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIST 180
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ G V + G H+ DG +Y G N+
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E H D+Q I V V+CG HTLAL D ++ G
Sbjct: 64 GQLGHEKSRKKPEH-------VVALDAQII--VAVSCGESHTLALNDKGQVFSWGLGSNG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL G++ R VP ++K + I ++ +W+S LS
Sbjct: 115 QL----GLNNFEECVR--VPRNIKCLSDVQIAQVACGYWHSHALS 153
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+ + V ++CG DH ALT+ VF++G G GQLG+ + T+ + PR++
Sbjct: 232 FPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGH--NCTNHEINPRKVF 289
Query: 79 ALSGLGVVQISAG 91
L G V QIS G
Sbjct: 290 ELMGNVVTQISCG 302
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L ++ +P + ++ +T +ACG+ H LAL + G +FSWG GQLG G
Sbjct: 118 LSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGA- 176
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
P+ I++L G+ QISAGG HS T G ++ WG N GQ+G+ G D D
Sbjct: 177 CVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGL-GDND----DRR 231
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ +VV + CG HT AL + ++ G Y QL
Sbjct: 232 FPVLLKTLRSQ--QVVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++CG H LAL +G VF+WG GS GQLG S D PR +++LS + + Q++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGL-SIVEDCLRVPRTVKSLSEVHITQVAC 144
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G WHS A + G +++WG N GQ+G+ G+ V P + Q I ++ G
Sbjct: 145 GYWHSLALARGGEIFSWGQNKYGQLGL-GQQGACVCSPQVIQ-----SLQGIPFGQISAG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
H+ L +++G G N++ QL +G
Sbjct: 199 GAHSFGLTLSGAIFGWGRNKFGQLGLG 225
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 10/164 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+V P R + F V D+ CG H + L ++G V++ G GQLG+ A +
Sbjct: 19 EEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEK----ARKK 74
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++ +L +V +S G H+ A G ++AWG + GQ+G+ D + S
Sbjct: 75 PEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSL 134
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
SE + + VACG H+LAL ++ G N+Y QL +G
Sbjct: 135 SE------VHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLG 172
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR G V + G H+ +DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G
Sbjct: 64 GQLGHEKARKKPEQVV----------SLDAQNI--VAVSCGEAHTLALNDKGQVFAWGLG 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVKNCP---IVKLFAEHWNSARLS 214
QL + V L VP VK+ I ++ +W+S L+
Sbjct: 112 SDGQLGLSI------VEDCLRVPRTVKSLSEVHITQVACGYWHSLALA 153
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++ L G V QI+
Sbjct: 244 VVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVN--PRKVFELMGSVVSQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
G H+ A G + ++G GQ+G + + P W D
Sbjct: 302 GRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPTPVKGCWRAHAD 350
>gi|241651044|ref|XP_002411264.1| RCC1 and BTB domain-containing protein, putative [Ixodes
scapularis]
gi|215503894|gb|EEC13388.1| RCC1 and BTB domain-containing protein, putative [Ixodes
scapularis]
Length = 533
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+PS + + V +ACG H LALT G V++WG + GQ+G SG+ N +P +
Sbjct: 116 VPSSIVVTMHHQVAHVACGSHHSLALTCAGEVYAWGQNNCGQVG---SGSTTN-QPTPRK 171
Query: 79 ALSGLG---VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
SG+G + I+ G S A ++G ++ WG+N GQ+G+ V+ P +
Sbjct: 172 VTSGIGGRRCIGIACGQTSSMAVMENGEVFGWGYNGNGQLGLGNN----VNQTSPCRVT- 226
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
N++ V V CG HT+AL D+ L+ G N Y QL G +QVS +P +
Sbjct: 227 -----NLQGVVVVCGYAHTMALSDEGVLYTWGANSYGQLGTGNKANQVS---PFRMPTEI 278
Query: 196 KNCPIVKLFAEHWNSARLSVPEHAK 220
+V++ A H+N + + +K
Sbjct: 279 GR--VVEIAASHYNHISAAATQTSK 301
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 10/99 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + +VV CG+ H +AL+ EG++++WG S GQLG +G AN + R
Sbjct: 222 PCRVTNLQGVVVV---CGYAHTMALSDEGVLYTWGANSYGQLG---TGNKAN-QVSPFRM 274
Query: 80 LSGLG-VVQISAGGWH--SAARTQDGFLYAWGWNNGGQV 115
+ +G VV+I+A ++ SAA TQ +Y WG G V
Sbjct: 275 PTEIGRVVEIAASHYNHISAAATQTSKVYMWGQCRGQSV 313
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 34 IACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+AC F + L +T V++ G+ S G LG T ++EPR++ AL G+ ++
Sbjct: 22 MACVFGSSGNEALVVTSNDDVYALGSNSSGCLGL--GDTHGSLEPRKVDALCRKGIQGLA 79
Query: 90 AG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G G H A TQ G L +WG N Q+G +V P S Q V VA
Sbjct: 80 YGSGPHVLAVTQSGDLLSWGHNGYCQLGNNCNTQGLV----PSSIVVTMHHQ---VAHVA 132
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
CGS H+LAL ++ G N Q+ G +Q
Sbjct: 133 CGSHHSLALTCAGEVYAWGQNNCGQVGSGSTTNQ 166
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4281 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4338
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ V ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4339 DRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4396
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
Q +VVD+ACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 4397 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 4451
Query: 185 VMTRLSV 191
+T L V
Sbjct: 4452 SLTGLGV 4458
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 4446 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 4503
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4504 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA----- 4556
Query: 139 SQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4557 LQGKKVNRVACGSAHTLA 4574
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 3241 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PR 3298
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
++ ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3299 QVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3354
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3355 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3401
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3403 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3460
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3461 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3513
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3514 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3558
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3287 LGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3346
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3347 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3394
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3395 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3454
Query: 179 GVSQ 182
+ Q
Sbjct: 3455 NIPQ 3458
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 74/144 (51%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I SG VV I+ G +S
Sbjct: 767 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYS 824
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 825 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 877
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 878 TLAVTENGQVWSWGDGDYGKLGRG 901
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4404 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4461
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4462 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4514
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4515 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4543
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3351 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3408
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3409 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3463
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3464 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3504
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 909 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 965
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 966 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPTALP-GL 1019
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 1020 DTKHI--VGIACGPAQSFA 1036
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3455 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3511
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPM 131
+ L G +V ++ G H A T G +YAWG N+ GQ G V K LV H +
Sbjct: 3512 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLV----HGL 3567
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLA 156
+ K+ VACGS H++A
Sbjct: 3568 --------EGQKITRVACGSSHSVA 3584
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 814 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 871
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 872 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 924
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 925 CGSQFSIALTKDGQVYSWGKGDNQ 948
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4341 PRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4398
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4399 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4450
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4451 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4491
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 21/162 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + L VT IAC L L++ G V++ S + P+ ++
Sbjct: 703 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 750
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L +P +S F
Sbjct: 751 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL--EEPKVIS---TF 805
Query: 138 DSQNI--KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 806 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 847
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 4211 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4268
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4269 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4323
Query: 168 WNEYNQLSMG 177
E +L G
Sbjct: 4324 EAEDGKLGHG 4333
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 94/190 (49%), Gaps = 24/190 (12%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 3965 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4022
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDP 128
PR I +L G+ VV I+AGG HSA T G L+ WG G++G E +L + D
Sbjct: 4023 DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA 4082
Query: 129 HPMSWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS- 181
Q +V+DVACGS TL L DD+ +W G +Y +L S GC V
Sbjct: 4083 L----------QGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPM 4132
Query: 182 QVSVMTRLSV 191
++ +T L V
Sbjct: 4133 KIDSLTGLGV 4142
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 4130 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 4187
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4188 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA----- 4240
Query: 139 SQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4241 LQGKKINRVACGSAHTLA 4258
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 13/146 (8%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ + L L +V++
Sbjct: 556 VVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLVEKLQDLDIVKV 613
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDV 147
G S A T+DG +Y WG + ++G G D H + + + DS Q KVVD+
Sbjct: 614 CCGSQFSVALTKDGQVYTWGKGDNQRLG-HGT------DEH-VRYPKLLDSLQGKKVVDI 665
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQ 173
A GS H LAL D+ + G N+ Q
Sbjct: 666 AVGSTHCLALTDEGEVHSWGSNDKLQ 691
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ + VV +A G H +ALT +G VFSWG G G+LG+ S
Sbjct: 2988 LGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRM 3047
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY+WG G++G H
Sbjct: 3048 NCD---KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLG---------H 3095
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3096 GDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3155
Query: 179 GVSQ 182
+ Q
Sbjct: 3156 NIPQ 3159
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 84/169 (49%), Gaps = 21/169 (12%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM--EPREIRALSGLG----VVQISAGGW 93
H LAL+ G V+SWG G G+LG+ DA EP I SG VVQI+ G
Sbjct: 457 HFLALSTSGEVYSWGCGDGGRLGH----GDATYLEEPALITTFSGKQTGKQVVQIACGST 512
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS-- 151
+SAA T DG LY WG N G++G D+ PM + + KVVDVACGS
Sbjct: 513 YSAAVTADGELYTWGRGNYGRLGHGSSEDVTT----PMLVTA---LKGQKVVDVACGSGD 565
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGC--GVSQVSVMTRLSVPEHVKNC 198
TLA+ ++ +W G +Y +L G G ++ +L + VK C
Sbjct: 566 AQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVC 614
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + L V +A G A+T EG +++ G + G+LG S + PR+
Sbjct: 2942 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQI-PRQ 3000
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3001 ISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI--- 3055
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3056 EALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQL 3102
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3104 PKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3161
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G D+ V P +
Sbjct: 3162 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG--HGTDVHVRKPQIVE----- 3214
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3215 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3259
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +D V D+ACG L LT + +V+SWG+G G+LG G+D P +I
Sbjct: 4077 PKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG--RGGSDGCKVPMKI 4134
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+GLGVV++ G S A T+ G +Y WG + ++G D H +
Sbjct: 4135 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS-------DDHVRRPRQVQ 4187
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q KV+ +A GS H + +D ++ G N+ QL G
Sbjct: 4188 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4227
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++ +P+
Sbjct: 3156 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVRKPQI 3212
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3213 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3267
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3268 LEGQ--KITRVACGSSHSVA 3285
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G ++SWG G G+LG+ + T + P+ ++
Sbjct: 3052 PRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTT--QLRPKLVKV 3109
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3110 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3164
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3165 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3205
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T +G +++WG G+ G+LG+ SS + P + AL G VV ++
Sbjct: 504 VVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSS--EDVTTPMLVTALKGQKVVDVAC 561
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D +V V
Sbjct: 562 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLVEKLQDLD-----IVKVC 614
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 615 CGSQFSVALTKDGQVYTWGKGDNQ 638
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V DIA G H +T G +F+WG G G+LG+ S + ++P+ + A
Sbjct: 4025 PRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDS--EDQLKPKLVDA 4082
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ ++ +G + T D +++WG + G++G G V PM
Sbjct: 4083 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4134
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4135 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4175
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL + + CG +ALT++G V++WG G +LG+ GTD ++ P+ +
Sbjct: 599 PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGH---GTDEHVRYPKLLD 655
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQ 114
+L G VV I+ G H A T +G +++WG N+ Q
Sbjct: 656 SLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQ 691
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 36 CGFDHCLALTQEGIVFSWGNG------SRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
CG HC AL+ G+ + SR Y + + P I LS +V+++
Sbjct: 391 CGPIHCKALSSTGVTQIVCSEKVFLILSRSGAVYTQNYKSTTLAPMLIHGLSSRKIVKLA 450
Query: 90 A--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
A G H A + G +Y+WG +GG++ G D + + + +VV +
Sbjct: 451 AHPDGQHFLALSTSGEVYSWGCGDGGRL---GHGDATYLEEPALITTFSGKQTGKQVVQI 507
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
ACGS ++ A+ D L+ G Y +L G
Sbjct: 508 ACGSTYSAAVTADGELYTWGRGNYGRLGHG 537
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +D V DIA G HCLALT EG V SW GS +L + + +P+ +
Sbjct: 651 PKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSW--GSNDKLQHFDTLFPNKKQPKALPG 708
Query: 80 LSGLGVVQISAGGWHSAA 97
L+ +V IS G S A
Sbjct: 709 LNSKHIVGISCGPGQSFA 726
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 72/164 (43%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG P E AL+ L VQ+ G A T DG LYA
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVKVPTPTE--ALATLRPVQLIGGEQTLFAVTADGKLYAT 3952
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 3953 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4007
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4008 EAEDGKLGHG----NRSPCDRPRVIESLRGVEVVDIAAGGAHSA 4047
>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
Length = 429
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREI 77
P ++ F +T + G H A+ ++G ++ WG+ +LG G + ME PRE+
Sbjct: 74 PKLLEAFEGKAITHVEFGASHSAAIDEDGKLYVWGSNEYSKLGL---GESSEMETLPREV 130
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD-PHPMSWSED 136
AL G+ +V +S G + +AA DG +Y+WGW G G D P P +
Sbjct: 131 EALKGVKIVDVSCGDYFTAAVDADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTL 190
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D Q + ++ V CG HT+AL D +W G EY +L G
Sbjct: 191 VD-QGVPILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNG 230
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS-GTDA-N 71
S +P ++ F V IA G D ALT G ++SWG S+ QLG D N
Sbjct: 232 SDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYN 291
Query: 72 ME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+E P + A +GL V QI+AG H+AA T DG LY W G ++ +E PH
Sbjct: 292 IESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMW----GSKIWIE---------PH 338
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
M+ ++ K+V VACG ++T+AL ++ ++ G N L G
Sbjct: 339 EMTAVNEY-----KMVQVACGRQYTVALSENGEVFTFGKGSSNCLGHG 381
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ + CG H +AL+++G +++WGNG G+LG S T EP E S VV I+A
Sbjct: 197 ILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEF--FSKDNVVSIAA 254
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS-WSEDFDSQNIKVVDVAC 149
G S A T +G LY+WG N+ Q+G+ G L + V++ + E F+ ++K +A
Sbjct: 255 GRDFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVK--QIAA 312
Query: 150 GSRHTLALCDDNSL--WG----------CGWNEYNQLSMGCG 179
G H A+ DD L WG NEY + + CG
Sbjct: 313 GYDHAAAVTDDGRLYMWGSKIWIEPHEMTAVNEYKMVQVACG 354
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 16/134 (11%)
Query: 43 ALTQEGIVFSWGNGSRGQLGYP---SSGTDANME---PREIRALSGLGVVQISAGGWHSA 96
A + + V++WGNG+ GQLG+ SG E P+ + A G + + G HSA
Sbjct: 37 AFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHSA 96
Query: 97 ARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
A +DG LY WG N ++G+ +++ + + + + +K+VDV+CG T
Sbjct: 97 AIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEAL--------KGVKIVDVSCGDYFT 148
Query: 155 LALCDDNSLWGCGW 168
A+ D ++ GW
Sbjct: 149 AAVDADGKMYSWGW 162
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWG-NGSRGQLGYPSSGTDANM 72
S++ +P ++ + + D++CG A+ +G ++SWG GS +
Sbjct: 121 SEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSWGWGGSTMKGAGGLGHAGGKD 180
Query: 73 E--PREIRAL--SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
E PR + L G+ ++ + G +H+ A ++DG ++AWG G++G G+ D P
Sbjct: 181 EPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAWGNGEYGRLG-NGESD-TCEVP 238
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR 188
P+ E F N VV +A G + AL D+ L+ G N NQL +G G++ + V
Sbjct: 239 EPI---EFFSKDN--VVSIAAGRDFSFALTDNGELYSWGGNSQNQLGIGGGLA-MDVYNI 292
Query: 189 LSVPEHVK--NCPIVKLFAEHWNSA 211
S+P V+ N VK A ++ A
Sbjct: 293 ESIPVLVEAFNGLSVKQIAAGYDHA 317
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D V+ I CG H LAL+ G V SWG+ GQLG+ + + P+ +R
Sbjct: 81 PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQL-PKVVRQ 139
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VVQI+ G HS A T G LY+WG N GQ+GV DL H +P+ +
Sbjct: 140 LVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-THCNYPLRLTTLL-- 196
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + +ACG H+ + +++G G N QL +
Sbjct: 197 -GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 232
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDAN 71
++ +P + + V IACG +H LALT G ++SWG+ GQLG P+ T N
Sbjct: 128 KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCN 187
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P + L G+ + I+ GG HS ++ G ++ WG NN GQ+G ++D
Sbjct: 188 Y-PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG--------LNDETNR 238
Query: 132 SWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
S+ + + + V VACG ++ L ++ ++ CG Y QL G G S ++ R+
Sbjct: 239 SYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL--GHGFSSNEMLPRM 295
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANMEPREI 77
PS++ D V +ACG H L LT G V++ G+ QLG+ P+ P I
Sbjct: 31 PSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK------RPLLI 84
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L ++QI G HS A + G + +WG N+ GQ+G + +V P +
Sbjct: 85 PELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKE-IVQLPKVVR----- 138
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
VV +ACG+ H+LAL L+ G N Y QL GV+ + +T + P
Sbjct: 139 QLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL----GVNSPNDLTHCNYP 189
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 19/143 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L + + IACG +H +++ G VF WG + GQLG + P +++
Sbjct: 189 PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKT 246
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L LGV ++ G S T +G ++ G GQ+G H S +E
Sbjct: 247 LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG------------HGFSSNEMLPR 294
Query: 140 QNIK-----VVDVACGSRHTLAL 157
++ + VACG+RHTLAL
Sbjct: 295 MVMELMGSTITQVACGNRHTLAL 317
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ L V +ACG + + LT EG VF+ G G+ GQLG+ S + M PR +
Sbjct: 241 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE--MLPRMVME 298
Query: 80 LSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVV 125
L G + Q++ G H+ A G +YA+G + GQ+G L++
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLML 345
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ S GQLG + + P +I V Q++ G H+ T G +YA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ Q+G DL P + +D+ ++ + CGSRH+LAL D + G N
Sbjct: 67 NDYSQLG----HDLPTKRPLLIPELQDY-----VIIQICCGSRHSLALSDWGQVLSWGDN 117
Query: 170 EYNQL 174
+ QL
Sbjct: 118 DCGQL 122
>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
[Strongylocentrotus purpuratus]
Length = 536
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE-IRALSGLGVVQI 88
++ IACG H L LT G VF+WG + GQ+G SG AN+ PR+ + L G VV I
Sbjct: 134 ISQIACGSHHSLVLTDRGEVFAWGYNNCGQVG---SGATANISTPRKVVSVLGGKRVVSI 190
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G+ V+ P P S + + A
Sbjct: 191 ACGQTSSLAVVDSGEVYGWGYNGNGQLGLGNN----VNQPSPCKVSS---LNGLIISQAA 243
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG-----CGVSQV 183
CG H++AL D+ +++ G N Y QL G CG +++
Sbjct: 244 CGYAHSMALSDEGNIYTWGANSYGQLGTGNKANLCGAAKI 283
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H +A T+ G ++SWG+ QLG + T+ + P I L + QI+ G HS
Sbjct: 90 HVVAATENGEIYSWGHNGYCQLG--NGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVL 147
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T G ++AWG+NN GQVG ++ P + +VV +ACG +LA+
Sbjct: 148 TDRGEVFAWGYNNCGQVGSGATANIST----PRKVVSVLGGK--RVVSIACGQTSSLAVV 201
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVS 184
D ++G G+N QL +G V+Q S
Sbjct: 202 DSGEVYGWGYNGNGQLGLGNNVNQPS 227
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 23/161 (14%)
Query: 28 DLVVT--DIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS 81
DLVV+ +AC F + + +T++ VF++GN LG +++ PR+I L
Sbjct: 19 DLVVSGVKLACVFGSAGNEAIYVTKDDEVFAFGNNHNACLGLGD--VMSSLTPRKIEGLC 76
Query: 82 GLGVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVG----VEGKLDLVVHDPHPMSWSED 136
G+ ++ G G H A T++G +Y+WG N Q+G +G L PH ++
Sbjct: 77 KKGMFALAFGSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQGLL------PHRITG--- 127
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + K+ +ACGS H+L L D ++ G+N Q+ G
Sbjct: 128 -NLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCGQVGSG 167
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ L+++ ACG+ H +AL+ EG +++WG S GQLG +G AN+
Sbjct: 228 PCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGANSYGQLG---TGNKANLCGAAKIG 284
Query: 80 LSGLGVVQISAGGWH--SAARTQDGFLYAWGWNNGGQV 115
S + I+A + SAA TQ G +Y WG G +
Sbjct: 285 ESIGRFIDIAATHYAHISAAMTQTGKVYMWGQCRGQSI 322
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
VT++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L V I
Sbjct: 154 VTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVAVNI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 ACGQMCSMAVVNTGEVYVWGYNGNGQLG----LGSSGNQPTPCRIAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC----GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+D L IAC H + T EG VF+WG+ + QLG + T+ + P
Sbjct: 89 PRRLD---SLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPC 143
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I LS V +++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 144 HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVT 199
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN V++ACG ++A+ + ++ G+N QL +G
Sbjct: 200 GCL--QNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLG 240
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + V +IACG +A+ G V+ WG GQLG SSG P I
Sbjct: 194 IPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPT--PCRI 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PAPVIVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSAHTSA 323
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPAPVI 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 342
>gi|440800739|gb|ELR21774.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 292
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 8/144 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ V ++CG DH AL EG VF+WG G G+LG+ S + +P ++
Sbjct: 156 VPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHGSE--RDSKKPVLVK 213
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
++GL + + GG+H T DG LY WGWN GQ G L L V + E
Sbjct: 214 GMNGLVALTVECGGYHMGVTTLDGELYMWGWNVYGQCG----LGLHVENQLTPVLVEQLR 269
Query: 139 SQNIKVVDVACGSRHTLALCDDNS 162
+ +V+ VACG HT+AL +NS
Sbjct: 270 GK--RVLMVACGESHTMALVSNNS 291
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQIS 89
V I+CG D LT G VF++G GS G+LG+ G D+N + P+ + L VV +S
Sbjct: 116 VAQISCGSDWTAVLTLAGKVFTFGVGSYGKLGH---GNDSNQLVPKLVEELDTERVVSLS 172
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H AA +G ++ WG G++G + D P+ + + V C
Sbjct: 173 CGADHMAALNIEGDVFTWGCGGNGRLGHGSERD----SKKPVLVK---GMNGLVALTVEC 225
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G H D L+ GWN Y Q +G
Sbjct: 226 GGYHMGVTTLDGELYMWGWNVYGQCGLG 253
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P R++ + V ++CG +H T+ V +WGNG+ G+LG + R
Sbjct: 57 NIPKRIN--IKKKVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLG------TGDEISRTQ 108
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L V QIS G +A T G ++ +G + G++G + +V P + E+
Sbjct: 109 PVLPEHKVAQISCGSDWTAVLTLAGKVFTFGVGSYGKLGHGNDSNQLV--PKLV---EEL 163
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN 169
D++ +VV ++CG+ H AL + + WGCG N
Sbjct: 164 DTE--RVVSLSCGADHMAALNIEGDVFTWGCGGN 195
>gi|388582263|gb|EIM22568.1| RCC1/BLIP-II [Wallemia sebi CBS 633.66]
Length = 581
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + V CG DH LALT GIV++WGNG + QLG E R
Sbjct: 236 PAVLPQLAKHRVVQAVCGADHALALTTSGIVYAWGNGQQQQLGRRVI---------ERRK 286
Query: 80 LSGL--------GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD---LVVHDP 128
L+GL +V + G +HS A +DG ++ WG N Q GV + D + P
Sbjct: 287 LNGLTPEPLHIRNIVAVGTGSYHSFAIDKDGVVFGWGLNKMRQTGVSDERDGYEDTIAVP 346
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
P+ + +V+ ++ G HTL L D+ +WGCG + +L +
Sbjct: 347 TPIDALHPDNHDGSRVIQISGGEHHTLFLFDNGEVWGCGRCDGKELGL 394
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWG--NGSRGQLGYPSS--GTDANMEP 74
+P ++D D +IA G LA+ +EG + +WG N + G LG+ G ++P
Sbjct: 177 VPMKVDGLDDFRAVNIAAGDYISLAIDEEGQMRAWGSFNSNDGLLGFDGRPGGARKQVKP 236
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKLDLVVHDPHPMS 132
+ L+ VVQ G H+ A T G +YAWG Q+G V + L P P+
Sbjct: 237 AVLPQLAKHRVVQAVCGADHALALTTSGIVYAWGNGQQQQLGRRVIERRKLNGLTPEPLH 296
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
+V V GS H+ A+ D ++G G N+ Q G + ++VP
Sbjct: 297 IR--------NIVAVGTGSYHSFAIDKDGVVFGWGLNKMRQ--TGVSDERDGYEDTIAVP 346
Query: 193 EHVKNCPIVKLFAEHWNSARL 213
PI L ++ + +R+
Sbjct: 347 -----TPIDALHPDNHDGSRV 362
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 13/185 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-----PREIRALSGLGV 85
V IA G H L + G ++SWG LG ++ T E P ++ L
Sbjct: 130 VEQIAAGGMHNLMIDSNGKIWSWGVNDGMSLGRVTADTGVEAEELETVPMKVDGLDDFRA 189
Query: 86 VQISAGGWHSAARTQDGFLYAWGW--NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
V I+AG + S A ++G + AWG +N G +G +G+ P + +
Sbjct: 190 VNIAAGDYISLAIDEEGQMRAWGSFNSNDGLLGFDGRPGGARKQVKPAVLPQ---LAKHR 246
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV-PEHVKNCPIVK 202
VV CG+ H LAL ++ W Q +G V + + L+ P H++N V
Sbjct: 247 VVQAVCGADHALALTTSGIVY--AWGNGQQQQLGRRVIERRKLNGLTPEPLHIRNIVAVG 304
Query: 203 LFAEH 207
+ H
Sbjct: 305 TGSYH 309
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI--RALSGLGVVQI 88
+ I+ G H LA++ +G V+SWG G+ QLG ++ T EP I AL+ + +
Sbjct: 474 IKQISAGLRHNLAVSDQGYVYSWGYGNACQLGQGNAETIE--EPTRIANTALTKVNALYS 531
Query: 89 SAGGWHSA 96
SAGG H A
Sbjct: 532 SAGGQHCA 539
>gi|340368103|ref|XP_003382592.1| PREDICTED: hypothetical protein LOC100632986 [Amphimedon
queenslandica]
Length = 2287
Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
+ +D F D ++T I+CG H LAL+ +G +++WG+ S GQLG + +P +
Sbjct: 1319 AHIDTFDDTIITSISCGVKHSLALSSDGSLYAWGDNSEGQLGLKT--LQPICKPSILSLP 1376
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ 140
G VVQ + G H+ A TQDG +++WG N Q+G L V+ P + +
Sbjct: 1377 FGRPVVQAACGDHHTLALTQDGRVFSWGKNTTSQLGHSKGLSRVL---APTQITHLISTP 1433
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
+K++ CGS H+ AL ++ G N Q CG V+ T++S P
Sbjct: 1434 VVKLI---CGSNHSAALTVSGGVFLWGDNRRAQ----CGFGHVT--TKISYP 1476
Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPR--------------EIRALSGLGVVQISAGGWH 94
++F WG G LG ME R I + IS G H
Sbjct: 1280 VMFCWGEAHDGALGLDVK-EKCVMEARPNTAFGDKKIKYIAHIDTFDDTIITSISCGVKH 1338
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A + DG LYAWG N+ GQ+G++ + P S F VV ACG HT
Sbjct: 1339 SLALSSDGSLYAWGDNSEGQLGLKTLQPIC----KPSILSLPFGR---PVVQAACGDHHT 1391
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
LAL D ++ G N +QL G+S+V T+++ H+ + P+VKL +SA L+
Sbjct: 1392 LALTQDGRVFSWGKNTTSQLGHSKGLSRVLAPTQIT---HLISTPVVKLICGSNHSAALT 1448
Query: 215 V 215
V
Sbjct: 1449 V 1449
Score = 67.0 bits (162), Expect = 6e-09, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 79/196 (40%), Gaps = 12/196 (6%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G K LS+V P+++ H + V + CG +H ALT G VF WG+ R Q G+
Sbjct: 1412 GHSKGLSRVL-APTQITHLISTPVVKLICGSNHSAALTVSGGVFLWGDNRRAQCGFGHVT 1470
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
T + P + V ++ G H+ + Q G +Y G N GQ+G G V
Sbjct: 1471 TKISY-PTLNEFMGRYAVSHVACGTDHTVFQVQSGHIYTVGSNEYGQLG-RGARGAVYSR 1528
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCD-DNSLWGCGWNEYNQLSMGCGVS---QV 183
P P+ + V V CG HT L L G QL G S +
Sbjct: 1529 PAPI-----MQLMTVVVQQVVCGRYHTTLLAKYTGDLITFGQGLMGQLGNGTTFSSEQSI 1583
Query: 184 SVMTRLSVPEHVKNCP 199
VM R S P+ P
Sbjct: 1584 PVMGRWSSPKRYLRSP 1599
>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
Length = 1024
Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 80/151 (52%), Gaps = 22/151 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG +PS+ T P+ + L+G+ +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTT-----PQIVEHLAGVPLA 194
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDFDSQNIK 143
QISAG HS A + G +Y+WG N GQ+G+ E K DP S E D+Q K
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESK-----DDP---SLIEGLDNQ--K 244
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V VACG H+ L D L+ G ++ QL
Sbjct: 245 VEFVACGGSHSALLTQDGLLFTFGAGKHGQL 275
Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ + V +ACG H LTQ+G++F++G G GQLG+ S T + P +
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS--TQNELRPCLVAE 291
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V QI+ G WH+ A D G ++++G GQ+G G D ++ P +S SE+
Sbjct: 292 LVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEEL 350
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG T++ +P I
Sbjct: 182 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGL--GHTESKDDPSLIEG 239
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG HSA TQDG L+ +G GQ+G + + P +E
Sbjct: 240 LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQN----ELRPCLVAELV-- 293
Query: 140 QNIKVVDVACGSRHTLALCDD 160
+V +ACG HTLA D
Sbjct: 294 -GYRVTQIACGRWHTLAYVSD 313
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q K++ + CG H+LAL L+ G N + QL +G + T + EH+ P
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG---RKFPSTTTPQIVEHLAGVP 192
Query: 200 IVKLFAEHWNSARLSV 215
+ ++ A +S LS+
Sbjct: 193 LAQISAGEAHSMALSM 208
>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 80/151 (52%), Gaps = 22/151 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG +PS+ T P+ + L+G+ +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTT-----PQIVEHLAGVPLA 194
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDFDSQNIK 143
QISAG HS A + G +Y+WG N GQ+G+ E K DP S E D+Q K
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESK-----DDP---SLIEGLDNQ--K 244
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V VACG H+ L D L+ G ++ QL
Sbjct: 245 VEFVACGGSHSALLTQDGLLFTFGAGKHGQL 275
Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ + V +ACG H LTQ+G++F++G G GQLG+ S T + P +
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS--TQNELRPCLVAE 291
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V QI+ G WH+ A D G ++++G GQ+G G D ++ P +S SE+
Sbjct: 292 LVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEEL 350
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG T++ +P I
Sbjct: 182 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGL--GHTESKDDPSLIEG 239
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG HSA TQDG L+ +G GQ+G + + P +E
Sbjct: 240 LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQN----ELRPCLVAELV-- 293
Query: 140 QNIKVVDVACGSRHTLALCDD 160
+V +ACG HTLA D
Sbjct: 294 -GYRVTQIACGRWHTLAYVSD 313
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q K++ + CG H+LAL L+ G N + QL +G + T + EH+ P
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG---RKFPSTTTPQIVEHLAGVP 192
Query: 200 IVKLFAEHWNSARLSV 215
+ ++ A +S LS+
Sbjct: 193 LAQISAGEAHSMALSM 208
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 13/162 (8%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P+ ++ +++ +A G HCLAL+ +G VFSWG G G+LG+ D+ P+ I
Sbjct: 4013 PTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLI 4070
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
ALSG+GV+ I+ G HSA T G + WG G++G D + P + +
Sbjct: 4071 EALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL--QPKLVEALLGY 4128
Query: 138 DSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +D+ACGS TL + DD+++W G +Y +L G
Sbjct: 4129 -----RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4165
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L V + CG +ALT+ G V++WG G +LG+ TD P+++
Sbjct: 4172 IPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH--GNTDHVRRPKKVA 4229
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G ++ WG N+ GQ+G +G + + P +
Sbjct: 4230 ALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLG-DGTVT-AIQRPRLVQ-----S 4282
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 4283 LQGKHIVKVICGSAHTLAL 4301
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P ++ V DIACG H A+T G +++WG G G+LG+ + T ++P+
Sbjct: 3018 TLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCT--QLKPK 3075
Query: 76 EIRALSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+ L G VVQ++ G + T++G +++WG + G++G G V PH +
Sbjct: 3076 LVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSV--PHQV-- 3131
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E +S + V+ + CG++ +LAL +W G +Y +L G
Sbjct: 3132 -ERLNS--VGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHG 3172
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG L LT+EG+VFSWG+G G+LG G++ P ++ L+ +GV+QI
Sbjct: 3085 VVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG--RGGSEGCSVPHQVERLNSVGVMQI 3142
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G D V P P+ + KV+ VA
Sbjct: 3143 ECGAQFSLALTKSGEVWTWGKGDYYRLG--HGTDQHVRKPTPIQ-----GLRGKKVIHVA 3195
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
G+ H LA+ D ++ G N++ Q G V
Sbjct: 3196 VGALHCLAVTDSGQVYAWGDNDHGQQGSGNTV 3227
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 82/175 (46%), Gaps = 29/175 (16%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
P ++ VV +A G H +ALT +G VFSWG G G+LG+ G +E P+
Sbjct: 2968 PRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH---GNRLTLEKPKL 3024
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPM 131
I +L V I+ G HSAA T G LY WG G++G + K LV
Sbjct: 3025 IESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVT------ 3078
Query: 132 SWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCGV 180
Q +VV VACGSR TL L ++ ++ G ++ +L S GC V
Sbjct: 3079 ------TLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSV 3127
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+++ V D+A G H + +T G++F+WG+G G+LG S N P
Sbjct: 662 VPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGS----CNGSPIP 717
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + V +I +G S A + DG LY WG +GG++G G + H P
Sbjct: 718 VQIDTLVNVSRIYSGSQFSVALSCDGTLYTWGKGHGGRLG-HGNSE---HSNVPKLVRA- 772
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ K+ DVA GS H LAL L+G G N+Y Q+
Sbjct: 773 --LEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQI 808
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P +++ + V I CG LALT+ G V++WG G +LG+ GTD ++ +P I
Sbjct: 3127 VPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGH---GTDQHVRKPTPI 3183
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ ++ G H A T G +YAWG N+ GQ +G + VV+ + D
Sbjct: 3184 QGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQ---QGSGNTVVNKKPNLVLGLD- 3239
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ V VACGS H++A
Sbjct: 3240 ---GVFVNRVACGSSHSVA 3255
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P+ L IA G ++Q+G +++ G G+ G+LG G + N+ PR++
Sbjct: 2915 LPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGL---GHNNNVPTPRQV 2971
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
L+ V V + +GG H+ A T DG +++WG G++G +L L P + E
Sbjct: 2972 PILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTL--EKPKLI---E 3026
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++ ++ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3027 SLRTKRVR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQL 3072
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ + V DIACG H +T +G V +WG G G+LG+ S + ++P+
Sbjct: 4064 YDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDS--EDQLQPKL 4121
Query: 77 IRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ AL G + I+ +G + T D +++WG + G++G G + PM
Sbjct: 4122 VEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKI----PMKIE 4177
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V+ V CGS+ ++AL S++ G +Y++L G
Sbjct: 4178 ---SLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4217
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D ++ V+ I G +AL+ +G +++WG G G+LG+ +S + + P+ +R
Sbjct: 716 IPVQIDTLVN--VSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNS--EHSNVPKLVR 771
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLVVHDPHPMSWSEDF 137
AL G + ++ G H A T G LY WG N+ Q+ G D ++H P +
Sbjct: 772 ALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQICPSGVSRDPIIHSPILTT----- 826
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSL 163
+++ + CG+ ++ C ++L
Sbjct: 827 -PPTLRISGMTCGAAQSIVWCHSSTL 851
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 36 CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHS 95
C H + L+ V+SWG G G+LG+ T + P I L V I G +S
Sbjct: 575 CEGKHVMVLSSANEVWSWGAGDGGRLGH--GDTVSKEHPTMIVGLHEKQVCGIYCGASYS 632
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T G L+ WG G++G D +V P + + + KVVDVA GS H
Sbjct: 633 AAITIAGELFTWGRGTYGRLGHGNSDDKLV--PTQVQALKSY-----KVVDVALGSGDAH 685
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG-CGVSQVSV 185
++ + D+ L+ G ++ +L G C S + V
Sbjct: 686 SMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPV 718
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+F WG+ RGQLG G+ M P ALS L +QI+ G A T DG LYA G+
Sbjct: 3939 IFGWGHNHRGQLG-GLDGSRIKM-PTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGY 3996
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GG++G+ G V P + E IK V V G +H LAL D ++ G
Sbjct: 3997 GAGGRLGIGGTDS--VSAP---TLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEG 4051
Query: 170 EYNQLSMG 177
E +L G
Sbjct: 4052 EDGKLGHG 4059
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 20/151 (13%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L V +AC ++ LT G VFS S + N+ P+ L G+ VVQI
Sbjct: 523 LQVRQVACTENNIYILTTGGQVFSL-----------HSNSSENIAPKAFEGLEGVHVVQI 571
Query: 89 SA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
+A G H + +++WG +GG++G G V HP + Q V
Sbjct: 572 AAHCEGKHVMVLSSANEVWSWGAGDGGRLG-HGD---TVSKEHPTMIVGLHEKQ---VCG 624
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ CG+ ++ A+ L+ G Y +L G
Sbjct: 625 IYCGASYSAAITIAGELFTWGRGTYGRLGHG 655
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 11/163 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
MP+ + L IA G A+T +G +++ G GTD+ P
Sbjct: 3958 IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYA--TGYGAGGRLGIGGTDSVSAPTL 4015
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +L + + V +++GG H A + DG +++WG G++G G D + S
Sbjct: 4016 VESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG-HGNRDSYDRPKLIEALS 4074
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I V+D+ACGS H+ + + G Y +L G
Sbjct: 4075 ------GIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHG 4111
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V WG + QLG G+ + P LS L + I+ G +QDG LYA G
Sbjct: 2894 VLVWGLNDKEQLG-GLKGSKVKL-PTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGE 2951
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
G++G+ ++ P+ + +K V V G +H +AL D ++ G
Sbjct: 2952 GTNGRLGLGHNNNVPTPRQVPI-----LNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3006
Query: 170 EYNQLSMG 177
E +L G
Sbjct: 3007 EDGKLGHG 3014
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D V+ I CG H LAL+ G V SWG+ GQLG+ + + P+ +R
Sbjct: 81 PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQL-PKVVRQ 139
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VVQI+ G HS A T G LY+WG N GQ+GV DL H +P+ +
Sbjct: 140 LVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-THCNYPLRLTTLL-- 196
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + +ACG H+ + +++G G N QL +
Sbjct: 197 -GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 232
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDAN 71
++ +P + + V IACG +H LALT G ++SWG+ GQLG P+ T N
Sbjct: 128 KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCN 187
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P + L G+ + I+ GG HS ++ G ++ WG NN GQ+G ++D
Sbjct: 188 Y-PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG--------LNDETNR 238
Query: 132 SWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
S+ + + + V VACG ++ L ++ ++ CG Y QL G G S ++ R+
Sbjct: 239 SYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL--GHGFSSNEMLPRM 295
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANMEPREI 77
PS++ D V +ACG H L LT G V++ G+ QLG+ P+ P I
Sbjct: 31 PSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK------RPLLI 84
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L ++QI G HS A + G + +WG N+ GQ+G + +V P +
Sbjct: 85 PELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKE-IVQLPKVVR----- 138
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
VV +ACG+ H+LAL L+ G N Y QL GV+ + +T + P
Sbjct: 139 QLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL----GVNSPNDLTHCNYP 189
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 19/143 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L + + IACG +H +++ G VF WG + GQLG + P +++
Sbjct: 189 PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKT 246
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L LGV ++ G S T +G ++ G GQ+G H S +E
Sbjct: 247 LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG------------HGFSSNEMLPR 294
Query: 140 QNIK-----VVDVACGSRHTLAL 157
++ + VACG+RHTLAL
Sbjct: 295 MVMELMGSTITQVACGNRHTLAL 317
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ L V +ACG + + LT EG VF+ G G+ GQLG+ S + M PR +
Sbjct: 241 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE--MLPRMVME 298
Query: 80 LSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVV 125
L G + Q++ G H+ A G +YA+G + GQ+G L++
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLML 345
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ S GQLG + + P +I V Q++ G H+ T G +YA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ Q+G DL P + +D+ ++ + CGSRH+LAL D + G N
Sbjct: 67 NDYSQLG----HDLPTKRPLLIPELQDY-----VIIQICCGSRHSLALSDWGQVLSWGDN 117
Query: 170 EYNQL 174
+ QL
Sbjct: 118 DCGQL 122
>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
Full=Cyclin-E-binding protein 1; AltName: Full=HECT
domain and RCC1-like domain-containing protein 5
gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 80/151 (52%), Gaps = 22/151 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG +PS+ T P+ + L+G+ +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTT-----PQIVEHLAGVPLA 194
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDFDSQNIK 143
QISAG HS A + G +Y+WG N GQ+G+ E K DP S E D+Q K
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESK-----DDP---SLIEGLDNQ--K 244
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V VACG H+ L D L+ G ++ QL
Sbjct: 245 VEFVACGGSHSALLTQDGLLFTFGAGKHGQL 275
Score = 70.1 bits (170), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ + V +ACG H LTQ+G++F++G G GQLG+ S T + P +
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS--TQNELRPCLVAE 291
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V QI+ G WH+ A D G ++++G GQ+G G D ++ P +S SE+
Sbjct: 292 LVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEEL 350
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG T++ +P I
Sbjct: 182 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGL--GHTESKDDPSLIEG 239
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG HSA TQDG L+ +G GQ+G + + P +E
Sbjct: 240 LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQN----ELRPCLVAELV-- 293
Query: 140 QNIKVVDVACGSRHTLALCDD 160
+V +ACG HTLA D
Sbjct: 294 -GYRVTQIACGRWHTLAYVSD 313
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q K++ + CG H+LAL L+ G N + QL +G + T + EH+ P
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG---RKFPSTTTPQIVEHLAGVP 192
Query: 200 IVKLFAEHWNSARLSV 215
+ ++ A +S LS+
Sbjct: 193 LAQISAGEAHSMALSM 208
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L VV I
Sbjct: 130 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G+ + P P S Q I+V VA
Sbjct: 187 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGN----QPTPCRVSA---LQGIRVQRVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 240 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 65 PRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 122
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 123 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVTGCL 178
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ D ++ G+N QL +G
Sbjct: 179 --QNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLG 216
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG P +
Sbjct: 170 IPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 228 SALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 284
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 285 -----RIIEIAACHSAHTSA 299
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 224 PCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVV 280
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 281 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 318
>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 494
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 90/177 (50%), Gaps = 25/177 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQIS 89
V +A G +H LA+ +G ++WG+ + GQLG GT +N EP +++ LSG VV ++
Sbjct: 150 VMAVAAGDNHSLAVRSDGSAWAWGSNASGQLG---EGTTSNRPEPVQVQGLSG--VVAVA 204
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVA 148
AG HS A DG ++AWG N GQ+G D +V Q + VV VA
Sbjct: 205 AGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLV----------PVQVQGLSGVVAVA 254
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
G H+LA+ +D ++WG G N+ NQL G RL VP V+ V A
Sbjct: 255 AGHHHSLAVRNDGTVWGWGRNDSNQLGKGS--------MRLLVPAQVQGLSAVVAVA 303
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 88/177 (49%), Gaps = 25/177 (14%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGG 92
+A G H LAL +G V++WG+ S GQ G GT N P + + LSG V+ ++AG
Sbjct: 103 VAAGSSHVLALRYDGTVWAWGSNSSGQRG---DGTTNNRALPVQAQGLSG--VMAVAAGD 157
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGS 151
HS A DG +AWG N GQ+G EG + P P+ Q + VV VA GS
Sbjct: 158 NHSLAVRSDGSAWAWGSNASGQLG-EGTTS---NRPEPV------QVQGLSGVVAVAAGS 207
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP-IVKLFAEH 207
H+LA+ D ++W G N QL G + RL VP V+ +V + A H
Sbjct: 208 AHSLAVRSDGTVWAWGANASGQLGDG------TTTDRL-VPVQVQGLSGVVAVAAGH 257
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +A H LA+ +G V++WG S GQLG + T + P ++ LS VV + A
Sbjct: 347 VVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGT--TTTRLVPVQVSGLSE--VVSVVA 402
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG+HS A DG + WG N GQ+G +G + P P+ Q V VA G
Sbjct: 403 GGYHSLAVRSDGSAWDWGSNAYGQLG-DGSTTYL---PVPVR-----VQQLSGVGAVASG 453
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
S H+LAL D ++W G+N + QL G ++ +V+ L
Sbjct: 454 SSHSLALRSDGTVWTWGYNSFGQLGNGPPLNTATVIRSL 492
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 91/205 (44%), Gaps = 29/205 (14%)
Query: 2 CDHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQL 61
+ L G +++L +P+++ +V +A G H LA+ +G V++ G+ + GQL
Sbjct: 277 SNQLGKGSMRLL-----VPAQVQGLSAVVA--VAAGDTHSLAVGSDGTVWAVGSNNNGQL 329
Query: 62 GYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D R + GVV ++A +HS A DG ++AWG+N+ GQ+G +G
Sbjct: 330 G------DGTTTYRLVPVPVLSGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLG-DGTT 382
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
+ SE VV V G H+LA+ D S W G N Y QL G
Sbjct: 383 TTRLVPVQVSGLSE--------VVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDGS--- 431
Query: 182 QVSVMTRLSVPEHVKNCPIVKLFAE 206
T L VP V+ V A
Sbjct: 432 ----TTYLPVPVRVQQLSGVGAVAS 452
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+A G H LAL +G V++WG S GQLG ++ P +++ LS VV + AG
Sbjct: 1 MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSE--VVAVDAGSS 58
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSR 152
HS A DG ++AWG N GQ+G D +S S + V+ VA GS
Sbjct: 59 HSLAVRSDGTVWAWGSNASGQLG----------DETTISRSTPVQVLGLSGVLFVAAGSS 108
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGC 178
H LAL D ++W G N Q G
Sbjct: 109 HVLALRYDGTVWAWGSNSSGQRGDGT 134
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ ++V D G H LA+ +G V++WG+ + GQLG + T + P ++
Sbjct: 40 VPVQVQGLSEVVAVD--AGSSHSLAVRSDGTVWAWGSNASGQLGDET--TISRSTPVQVL 95
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
LS GV+ ++AG H A DG ++AWG N+ GQ G D + +
Sbjct: 96 GLS--GVLFVAAGSSHVLALRYDGTVWAWGSNSSGQRG----------DGTTNNRALPVQ 143
Query: 139 SQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
+Q + V+ VA G H+LA+ D S W G N QL G
Sbjct: 144 AQGLSGVMAVAAGDNHSLAVRSDGSAWAWGSNASGQLGEGT 184
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L VV+ +A G+ H LA+ +G + WG+ + GQLG S T P ++ LSG+G V
Sbjct: 394 LSEVVSVVAGGY-HSLAVRSDGSAWDWGSNAYGQLGDGS--TTYLPVPVRVQQLSGVGAV 450
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
++G HS A DG ++ WG+N+ GQ+G
Sbjct: 451 --ASGSSHSLALRSDGTVWTWGYNSFGQLG 478
>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
rubripes]
Length = 3883
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 13/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++P+ + F VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +
Sbjct: 3090 LYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGH--GNNERQRR 3147
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I AL G VVQ++ G HSA T DG L+ +G G++G + ++ P ++
Sbjct: 3148 PKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKML--PERVAA 3205
Query: 134 SEDFDSQNIKVVDVACGSRHTLALC-DDNSLWGCGWNEYNQLSMGCGVSQ 182
E + V V+CG HTL L D ++W G +Y +L G ++
Sbjct: 3206 LEGY-----HVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAK 3250
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 77/143 (53%), Gaps = 19/143 (13%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA+T +G VFSWG+G G+LG+ +S T P+ I+ L VV SAG HSAA
Sbjct: 478 HTLAITVDGEVFSWGDGEYGKLGHGNSATQKY--PKIIQGPLFSKIVVSASAGYRHSAAV 535
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS--QNIK-VVDVACGSRHTL 155
T+DG LY WG + G++G H S S + + ++I V VACGS HT+
Sbjct: 536 TKDGELYTWGEGDFGRLG------------HSDSQSRNMPTLVKDISGVGQVACGSSHTI 583
Query: 156 ALCDD-NSLWGCGWNEYNQLSMG 177
A+ D ++W G + +L G
Sbjct: 584 AVAQDGRTVWSFGGGDNGKLGHG 606
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 19/183 (10%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANM 72
SQ +MP+ + V +ACG H +A+ Q+G V+S+G G G+LG+ T+
Sbjct: 557 SQSRNMPTLVKDISG--VGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGH--GDTNRVY 612
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P+ I AL G + ++ AG S A T G ++AWG G +G G + P
Sbjct: 613 RPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGC--GSCLGC-GSSETTSLRPR--- 666
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
+ ED K++D++CG H LAL +N ++ G N Q CG S T ++ P
Sbjct: 667 FVEDLSI--TKIIDISCGDSHCLALSHENEVYAWGNNTMGQ----CGQGHTS--TPITRP 718
Query: 193 EHV 195
+ V
Sbjct: 719 KKV 721
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 24/178 (13%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+V + G+ H A+T++G +++WG G G+LG+ S NM P ++ +SG+G Q++
Sbjct: 521 IVVSASAGYRHSAAVTKDGELYTWGEGDFGRLGH-SDSQSRNM-PTLVKDISGVG--QVA 576
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A QDG ++++G + G++G G + V+ P + F + V
Sbjct: 577 CGSSHTIAVAQDGRTVWSFGGGDNGKLG-HGDTNR-VYRPKVIEALHGF-----IIRKVC 629
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLF 204
GS+ +LAL + WGCG +GCG S+ + + P V++ I K+
Sbjct: 630 AGSQSSLALTSAGQVFAWGCGS------CLGCGSSETTSLR----PRFVEDLSITKII 677
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DI+CG HCLAL+ E V++WGN + GQ G + T P+++ L G+ + QI+A
Sbjct: 676 IIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT-RPKKVLGLEGVSIQQITA 734
Query: 91 GGWHSAART---QDGFLYAW 107
G HS A T D L AW
Sbjct: 735 GTSHSLAWTAVPTDRQLVAW 754
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ ++ + G LALT G VF+WG GS LG SS T ++ PR +
Sbjct: 612 YRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGS--CLGCGSSET-TSLRPRFV 668
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS ++ IS G H A + + +YAWG N GQ G +G + P +
Sbjct: 669 EDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCG-QGHTSTPITRPKKV-----L 722
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + + + G+ H+LA
Sbjct: 723 GLEGVSIQQITAGTSHSLA 741
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ V ++CG +H L L+ +G+ V+++G+G G+LG SS A P+++
Sbjct: 3199 LPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS--TAKYYPQKV 3256
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+ ++ G S DG +Y +G +G+ + +P + E
Sbjct: 3257 EQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQER--LIGLPDSMLKNRSNPQVVPSLE-- 3312
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG-CG-VSQVSVMTRLSVPEHV 195
+ + D+A G H LAL ++ G N QL +G C V + +++T L
Sbjct: 3313 ---GLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPVKEPTLITAL----QG 3365
Query: 196 KNCPIVKLFAEHWNSARLSVPEHAKDS 222
KN I ++ A +S+ + P +K+S
Sbjct: 3366 KN--IKQISAGRCHSSAWTTPSTSKNS 3390
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S + P +++ + + + CG + + +G V+++G +G P S
Sbjct: 3247 STAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQ--ERLIGLPDSMLKNRSN 3304
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
P+ + +L GL + I+ G H A + G +YAWG N+ GQ+G+
Sbjct: 3305 PQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGL 3348
>gi|221056484|ref|XP_002259380.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809451|emb|CAQ40153.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 432
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 14 SQVFHMPSRMDHFL--DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
Q P +++ F D +I CG H L LT+ G V++ G G G+LG + G
Sbjct: 178 KQNLSTPKKVETFKSDDSEFVNICCGDQHSLVLTKNGKVYACGRGEFGRLGKGNHGDQLF 237
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-DLVVHDPHP 130
E + + + V +IS G SAA + G +Y WG N+ GQ+G+E + DL H+ +P
Sbjct: 238 FEEIDFFISNNIIVKEISCGHSFSAALSTHGEVYVWGRNDYGQLGIENSIGDLYSHEVYP 297
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WG 165
+ FD +NIK+ +ACG H +A ++N + WG
Sbjct: 298 NK-VKYFDMENIKIKFIACGDNHMIACSENNVIFFWG 333
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-----PSSGTDANME 73
MP ++ +F + + ++ G +H A +G ++++G +GQLG + ++
Sbjct: 68 MPEKVPNFQNAKIEKLSAGCNHS-AFIVDGKIYTYGLNDKGQLGRSIEEEKDGNKNYSLT 126
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ ++ + + G H+ A + LY+WGW G G +
Sbjct: 127 PKVVKTDGDIKFRDVCCGFKHTLAVDVNNNLYSWGWGGNFFKGANGLGHGNKQNLSTPKK 186
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E F S + + V++ CG +H+L L + ++ CG E+ +L G
Sbjct: 187 VETFKSDDSEFVNICCGDQHSLVLTKNGKVYACGRGEFGRLGKG 230
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 15/141 (10%)
Query: 20 PSRMDHF--LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P+++ +F ++ + IACG +H +A ++ ++F WG SR L P + T + P
Sbjct: 297 PNKVKYFDMENIKIKFIACGDNHMIACSENNVIFFWG--SRAWLE-PKAIT---LSPLYQ 350
Query: 78 RALSGLGVVQISAGG--WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
++ + +I AGG ++ + D LY+WG N + ++ K + H+ + +E
Sbjct: 351 NSIIKKNIDKIQAGGNTYYYSMLLSDNKLYSWGKYNSSCLALKDKKN---HNEPTLVDTE 407
Query: 136 DFDSQNIKVVDVACGSRHTLA 156
F+ + V D++CG LA
Sbjct: 408 LFNGE--IVCDISCGRGRVLA 426
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 95/187 (50%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4027 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4084
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G L+ WG G++G D + P +
Sbjct: 4085 DRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLV 4142
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
+ + +V+D+ACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 4143 EALQGY-----RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 4197
Query: 185 VMTRLSV 191
+T L V
Sbjct: 4198 SLTGLGV 4204
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 77/144 (53%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL+ G VFSWG G G+LG+ T EP+ I ALSG VV I+ G +S
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGH--GDTVPLEEPKMISALSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DV+CGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDQTI----PMLVT---GLKGLKVIDVSCGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ + VV +A G H +ALT +G VFSWG G G+LG+ S
Sbjct: 3030 LGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRM 3089
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3090 NCD---KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG---------H 3137
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3138 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3197
Query: 179 GVSQ 182
+ Q
Sbjct: 3198 NIPQ 3201
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 29 LVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D++CG LA+T+ G V+SWG+G G+LG G+D P+ I L L +V
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDIV 661
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y WG + ++G G + H +P E + KV+D
Sbjct: 662 KVRCGSQFSIALTKDGQVYTWGKGDNQRLG-HGTEE---HVRYP-KLLEGLKGK--KVID 714
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 715 VAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2984 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3041
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3042 QITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3097
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3098 -EALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLK 3145
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3203
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G D+ V P +
Sbjct: 3204 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG--HGTDVHVRKPQVVE----- 3256
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3257 GLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVN 3301
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++ +P+
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVRKPQV 3254
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3255 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3309
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3310 LEGQ--KITRVACGSSHSVA 3327
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 10/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGN-GSRGQLGYPSSGTDANMEPRE 76
+P ++D L V + CG +ALT+ G V++W +LG+ S D PR+
Sbjct: 4191 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSD--DHVRRPRQ 4248
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4249 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA--- 4303
Query: 137 FDSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4304 --LQGKKINRVACGSAHTLA 4321
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3094 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3151
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3152 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3206
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3207 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3247
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS + P + L GL V+ +S
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS--EDQTIPMLVTGLKGLKVIDVSC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D +V V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----IVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYTWGKGDNQ 688
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL + + CG +ALT++G V++WG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 706 GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ V DIACG L LT + V+SWG+G G+LG G+D P +I
Sbjct: 4139 PKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKI 4196
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWG-WNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+L+GLGVV++ G S A T+ G +Y W + + ++G G D H +
Sbjct: 4197 DSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLG-HGS------DDHVRRPRQV 4249
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q KV+ +A GS H + +D ++ G N+ QL G
Sbjct: 4250 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4290
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 13/148 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +F+WG G G+LG+ S + ++P+ + A
Sbjct: 4087 PRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDS--EDQLKPKLVEA 4144
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4196
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLW 164
DS + VV V CGS+ ++AL +++
Sbjct: 4197 DSLTGLGVVKVECGSQFSVALTKSGAVY 4224
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L V +AC L L++ G V++ S + P+ +++
Sbjct: 443 PIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYNSD------------TLGPQLVQS 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A + +G +++WG +GG++ G D V + M +
Sbjct: 491 LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRL---GHGDTVPLEEPKMISALSG 547
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
VV +ACGS ++ A+ + L+ G Y +L G Q M
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3957 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4015 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4069
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4070 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4109
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 3827 TESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 3884
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDP 128
PR I +L G+ VV I+AGG HSA T G L+ WG G++G E +L + D
Sbjct: 3885 DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA 3944
Query: 129 HPMSWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+DVACGS TL L DD+ +W G +Y +L G
Sbjct: 3945 L----------QGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG 3985
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 29 LVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ + L L +V
Sbjct: 566 LKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLVEKLQDLDIV 623
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVV 145
++ G S A T+DG +Y WG + ++G G D H + + + D+ Q KVV
Sbjct: 624 KVCCGSQFSVALTKDGQVYTWGKGDNQRLG-HGT------DEH-VRFPKLLDTLQGKKVV 675
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQ 173
DVA GS H LAL DD + G N+ Q
Sbjct: 676 DVAVGSTHCLALTDDGEVHSWGSNDKLQ 703
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ + VV +A G H +ALT +G VFSWG G G+LG+ S
Sbjct: 2797 LGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRM 2856
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY+WG G++G H
Sbjct: 2857 NCD---KPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLG---------H 2904
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 2905 GDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 2964
Query: 179 GVSQ 182
+ Q
Sbjct: 2965 NIPQ 2968
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL+ G VFSWG G G+LG+ T EP I A +G VV I+ G +S
Sbjct: 469 HYLALSSNGEVFSWGCGDGGRLGH--GDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYS 526
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T DG LY WG N G++G D PM + + +KVVDVACGS
Sbjct: 527 AAITVDGELYTWGRGNYGRLGHGSSEDQTT----PMLVTA---LKGLKVVDVACGSGDAQ 579
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGC--GVSQVSVMTRLSVPEHVKNC 198
TLA+ ++ +W G +Y +L G G ++ +L + VK C
Sbjct: 580 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVC 626
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 2913 PKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 2970
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G D+ V P +
Sbjct: 2971 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG--HGTDVHVRKPQMVE----- 3023
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3024 GLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVN 3068
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPR 75
+PS + L V +A G A+T EG +++ G + G+LG SSGT PR
Sbjct: 2751 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPI--PR 2808
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 2809 QITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 2864
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 2865 -EALKAKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQL 2911
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++ +P+
Sbjct: 2965 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVRKPQM 3021
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3022 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3076
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3077 LEGQ--KITRVACGSSHSVA 3094
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H A+T G ++SWG G G+LG+ + T + P+ ++ L G V+Q++
Sbjct: 2872 IRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTT--QLRPKLVKVLLGHRVIQVAC 2929
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T +G +++WG + G++G G + P + E + Q V +
Sbjct: 2930 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERLNGQG--VCQIE 2982
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
CG++ +LAL +W G +Y +L G V
Sbjct: 2983 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3014
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T +G +++WG G+ G+LG+ SS + P + AL GL VV ++
Sbjct: 516 VVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSS--EDQTTPMLVTALKGLKVVDVAC 573
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D +V V
Sbjct: 574 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLVEKLQDLD-----IVKVC 626
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 627 CGSQFSVALTKDGQVYTWGKGDNQ 650
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +D V D+ACG L LT + +V+SWG+G G+LG G+D P +I
Sbjct: 3939 PKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG--RGGSDGCKTPMKI 3996
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+GLGV+++ G S A T+ G +Y WG + ++G D H +
Sbjct: 3997 DSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS-------DDHVRRPRQVQ 4049
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
Q KV+ +A GS H + +D + W
Sbjct: 4050 GLQGKKVIAIATGSLHCVCCTEDGRIKVFQW 4080
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL + + CG +ALT++G V++WG G +LG+ GTD ++ P+ +
Sbjct: 611 PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGH---GTDEHVRFPKLLD 667
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQ 114
L G VV ++ G H A T DG +++WG N+ Q
Sbjct: 668 TLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQ 703
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V DIA G H +T G +F+WG G G+LG+ S + ++P+ + A
Sbjct: 3887 PRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDS--EDQLKPKLVDA 3944
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ ++ +G + T D +++WG + G++G G PM
Sbjct: 3945 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKT----PMK----I 3996
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + V+ V CGS+ ++AL +++ G +Y++L G
Sbjct: 3997 DSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4037
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L VT I C L L+ G V++ S + P I +LS +V++
Sbjct: 414 LGVTQIVCSEKGFLILSSSGAVYTQNYKS------------TTLAPMLIHSLSSRKMVKL 461
Query: 89 SA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
+A G H A + +G +++WG +GG++ G D + M + + VV
Sbjct: 462 AAHPDGQHYLALSSNGEVFSWGCGDGGRL---GHGDTTYLEEPTMIAAFNGKQAGKHVVH 518
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
+ACGS ++ A+ D L+ G Y +L G Q + M
Sbjct: 519 IACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPM 558
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +D V D+A G HCLALT +G V SW GS +L + + +P+ +
Sbjct: 661 RFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSW--GSNDKLQHFDTLFSNKKQPKAL 718
Query: 78 RALSGLGVVQISAGGWHSAA 97
L+ +V IS G S A
Sbjct: 719 PGLNSKHIVGISCGPGQSFA 738
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 72/164 (43%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG P E AL+ L VQ+ G A T DG LYA
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTE--ALATLRPVQLIGGEQTLFAVTADGKLYAT 3814
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E I+ V V G +H LAL + ++ G
Sbjct: 3815 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWG 3869
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 3870 EAEDGKLGHG----NRSPCDRPRVIESLRGVEVVDIAAGGAHSA 3909
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
Length = 4822
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4010 TESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4067
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDP 128
PR I +L G+ VV I+AGG HSA T G L+ WG G++G E +L + D
Sbjct: 4068 DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA 4127
Query: 129 HPMSWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+DVACGS TL L DD+ +W G +Y +L G
Sbjct: 4128 L----------QGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG 4168
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 9/138 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L VT + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 4175 IPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 4232
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4233 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA----- 4285
Query: 139 SQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4286 LQGKKINRVACGSAHTLA 4303
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 29 LVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ + L L +V
Sbjct: 589 LKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLVEKLQDLDIV 646
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVV 145
++ G S A T+DG +Y WG + ++G G D H + + + D+ Q KVV
Sbjct: 647 KVCCGSQFSVALTKDGQVYTWGKGDNQRLG-HGT------DEH-VRFPKLLDTLQGKKVV 698
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQ 173
DVA GS H LAL DD + G N+ Q
Sbjct: 699 DVAVGSTHCLALTDDGEVHSWGSNDKLQ 726
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ + VV +A G H +ALT +G VFSWG G G+LG+ S
Sbjct: 3012 LGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRM 3071
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY+WG G++G H
Sbjct: 3072 NCD---KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLG---------H 3119
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3120 GDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3179
Query: 179 GVSQ 182
+ Q
Sbjct: 3180 NIPQ 3183
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPR 75
+PS + L V +A G A+T EG +++ G + G+LG SSGT PR
Sbjct: 2966 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPI--PR 3023
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3024 QITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3079
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3080 -EALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNATQL 3126
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3128 PKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3185
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G D+ V P +
Sbjct: 3186 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG--HGTDVHVRKPQMVE----- 3238
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3239 GLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVN 3283
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 83/169 (49%), Gaps = 21/169 (12%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM--EPREIRALSGLG----VVQISAGGW 93
H LAL+ G VFSWG G G+LG+ DA EP I A +G VV I+ G
Sbjct: 492 HYLALSSNGEVFSWGCGDGGRLGH----GDATYLEEPTMIAAFNGKQAGKHVVHIACGST 547
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS-- 151
+SA T DG LY WG N G++G D PM + + +KVVDVACGS
Sbjct: 548 YSAVITIDGELYTWGRGNYGRLGHGSSEDQTT----PMLVTA---LKGLKVVDVACGSGD 600
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGC--GVSQVSVMTRLSVPEHVKNC 198
TLA+ ++ +W G +Y +L G G ++ +L + VK C
Sbjct: 601 AQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVC 649
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++ +P+
Sbjct: 3180 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVRKPQM 3236
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3237 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3291
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3292 LEGQ--KITRVACGSSHSVA 3309
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G ++SWG G G+LG+ + T + P+ ++
Sbjct: 3076 PRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNAT--QLRPKLVKV 3133
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3134 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3188
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3189 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3229
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +D V D+ACG L LT + +V+SWG+G G+LG G+D P +I
Sbjct: 4122 PKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG--RGGSDGCKIPMKI 4179
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+GLGV ++ G S A T+ G +Y WG + ++G D H +
Sbjct: 4180 DSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS-------DDHVRRPRQVQ 4232
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q KV+ +A GS H + +D ++ G N+ QL G
Sbjct: 4233 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4272
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + +T +G +++WG G+ G+LG+ SS + P + AL GL VV ++
Sbjct: 539 VVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSS--EDQTTPMLVTALKGLKVVDVAC 596
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D +V V
Sbjct: 597 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLVEKLQDLD-----IVKVC 649
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 650 CGSQFSVALTKDGQVYTWGKGDNQ 673
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL + + CG +ALT++G V++WG G +LG+ GTD ++ P+ +
Sbjct: 634 PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGH---GTDEHVRFPKLLD 690
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQ 114
L G VV ++ G H A T DG +++WG N+ Q
Sbjct: 691 TLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQ 726
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V DIA G H +T G +F+WG G G+LG+ S + ++P+ + A
Sbjct: 4070 PRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDS--EDQLKPKLVDA 4127
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ ++ +G + T D +++WG + G++G G + PM
Sbjct: 4128 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKI----PMK----I 4179
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + V V CGS+ ++AL +++ G +Y++L G
Sbjct: 4180 DSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4220
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L VT I C L L+ G V++ S + P I +LS +V++
Sbjct: 437 LGVTQIVCSEKGFLILSSSGAVYTQNYKS------------TTLAPMLIHSLSSRKIVKL 484
Query: 89 SA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
+A G H A + +G +++WG +GG++ G D + M + + VV
Sbjct: 485 AAHPDGQHYLALSSNGEVFSWGCGDGGRL---GHGDATYLEEPTMIAAFNGKQAGKHVVH 541
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
+ACGS ++ + D L+ G Y +L G Q + M
Sbjct: 542 IACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPM 581
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 72/164 (43%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG P E AL+ L VQ+ G A T DG LYA
Sbjct: 3940 GTIYGWGHNHRGQLGGIEGAKVKVPTPTE--ALATLRPVQLIGGEQTLFAVTADGKLYAT 3997
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E I+ V V G +H LAL + ++ G
Sbjct: 3998 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWG 4052
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4053 EAEDGKLGHG----NRSPCDRPRVIESLRGVEVVDIAAGGAHSA 4092
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +D V D+A G HCLALT +G V SWG+ + Q D ++
Sbjct: 684 RFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQ------HFDTLSNKKQP 737
Query: 78 RALSGLG-VVQISAGGWHSAA 97
+AL GL +V IS G S A
Sbjct: 738 KALPGLKHIVGISCGPGQSFA 758
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
VT++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L V I
Sbjct: 130 VTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVAVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 187 ACGQMCSMAVVNTGEVYVWGYNGNGQLG----LGSSGNQPTPCRIAA---LQGIRVQRVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 240 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC----GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+D L IAC H + T EG VF+WG+ + QLG + T+ + P
Sbjct: 65 PRRLD---SLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPC 119
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I LS V +++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 120 HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVT 175
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN V++ACG ++A+ + ++ G+N QL +G
Sbjct: 176 GCL--QNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLG 216
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + V +IACG +A+ G V+ WG GQLG SSG P I
Sbjct: 170 IPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPT--PCRI 227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 228 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PAPVIVEKD- 284
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 285 -----RIIEIAACHSAHTSA 299
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 224 PCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPAPVI 280
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 281 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 318
>gi|322785446|gb|EFZ12117.1| hypothetical protein SINV_05294 [Solenopsis invicta]
Length = 585
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 19/201 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P++++ + DIACG H +AL ++G +++WG + GQ G SS T PR++ +
Sbjct: 173 PTQVNSLGIKRIVDIACGSHHSVALNEDGEIYAWGQNNCGQAG--SSITTNQGVPRQVNS 230
Query: 80 -LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L+G V QI+ G + A ++G +Y WG+N GQ+G+ ++ M+
Sbjct: 231 NLAGKKVAQIACGQTSTVALLENGEVYGWGYNGVGQLGIGNYVN-------QMTPCRIGT 283
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN- 197
+V VACG HTLAL D+ L+ G N Y QL +S T P VK+
Sbjct: 284 LLGTVIVKVACGYVHTLALTDEGQLYVWGGNSYGQLG-------ISNKTNACNPVLVKHE 336
Query: 198 -CPIVKLFAEHWNSARLSVPE 217
+ + A H+N ++V E
Sbjct: 337 MGRVSDIAALHYNHTSVAVGE 357
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEG-------IVFSWGNGSRGQLGYPSSGT-DA 70
P ++D + + A G H LALT+EG V+SWG+ +LG +GT +
Sbjct: 113 PKKVDALCEKDIKMFAYGSGPHVLALTKEGEVRLYLRKVYSWGHNGYCELG---NGTCNQ 169
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
+ P ++ +L +V I+ G HS A +DG +YAWG NN GQ G + + P
Sbjct: 170 GLYPTQVNSLGIKRIVDIACGSHHSVALNEDGEIYAWGQNNCGQAGS----SITTNQGVP 225
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ + + KV +ACG T+AL ++ ++G G+N QL +G V+Q++
Sbjct: 226 RQVNSNLAGK--KVAQIACGQTSTVALLENGEVYGWGYNGVGQLGIGNYVNQMT 277
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN--MEPREI 77
P R+ L V+ +ACG+ H LALT EG ++ WG S GQLG + N + E+
Sbjct: 278 PCRIGTLLGTVIVKVACGYVHTLALTDEGQLYVWGGNSYGQLGISNKTNACNPVLVKHEM 337
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
+S + + + S A + G +Y WG G +
Sbjct: 338 GRVSDIAALHYNHT---SVAVGEGGRVYMWGHCRGQSI 372
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 89/164 (54%), Gaps = 21/164 (12%)
Query: 29 LVVTDIAC--GFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV 85
VVT++A G + H LALT+ G VFSWG+G G+LG+ +S + PR+I AL G V
Sbjct: 3489 FVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHGNS--ERQRRPRQIEALRGEDV 3546
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGV----EGKLDLVVHDPHPMSWSEDFDSQN 141
+ ++ G HSA T DG L+ +G ++ G++G+ KL V P
Sbjct: 3547 LHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQP----------- 3595
Query: 142 IKVVDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMGCGVSQVS 184
I V +ACG+ HT+ + D S+W G EY QL +G ++++
Sbjct: 3596 IMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLGRTTAKMT 3639
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 15/168 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P+++ ++V IACG +H + +T + V+++G G GQLG T A M P+ +
Sbjct: 3586 LPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGL--GRTTAKMTPQYV 3643
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP---MSWS 134
A S L + +I G + A T++G +Y+ G N + ++D D +P M+ S
Sbjct: 3644 DAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIF---EVDTQHADYYPQQVMALS 3700
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
E F + D+A G H LAL + +W G + QL +G + Q
Sbjct: 3701 EQF------IEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQ 3742
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
F +P R+D F DL + DIA G +HCLALT + V+SWGN + GQ G ++ + + PR
Sbjct: 663 TFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPV-LLPR 721
Query: 76 EIRALSGLGVVQISAGGWHSAA 97
++ + QIS G HS A
Sbjct: 722 KVTGFDNHVIYQISVGTSHSIA 743
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + DIA G++H LALT+EG V+SWGN + GQLG T EP I
Sbjct: 3691 YYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGL--GQTLPQREPCLI 3748
Query: 78 RALSGLGVVQISAGGWHSAA 97
+L G G+ QISAG HSAA
Sbjct: 3749 SSLQGKGIRQISAGHNHSAA 3768
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA+ +G ++SWG+G G+LG+ + T + P+ I + G V QI+ G HSAA
Sbjct: 480 HTLAIASDGRIYSWGDGDYGKLGHGNHVTQKS--PKLILGPMQGKVVRQIAVGYRHSAAI 537
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T +G LY WG + G++G H + +D V V+CGS T+ +
Sbjct: 538 TSEGLLYTWGDGDYGRLGHGDN-----HSRSIPTLVKDITG----VGSVSCGSSFTVVIS 588
Query: 159 DD-NSLWGCGWNEYNQLSMG 177
D ++W G + +L G
Sbjct: 589 QDATTVWSFGAGDNGKLGHG 608
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 31 VTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V ++CG + ++Q+ V+S+G G G+LG+ T P+ I L GL + ++
Sbjct: 574 VGSVSCGSSFTVVISQDATTVWSFGAGDNGKLGH--GDTSRVYRPKVISNLQGLLIRKVC 631
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
S A T G ++ WG +G +G G+ D P + ++F Q+++++D+A
Sbjct: 632 CASQSSLALTSIGQVFVWG--SGPCLGY-GQADATFLVPKRL---DEF--QDLQIIDIAV 683
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
G H LAL DN ++ G N Q +G S V
Sbjct: 684 GDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPV 717
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPRE 76
+ P + + L++ + C LALT G VF WG+G LGY + DA + P+
Sbjct: 614 YRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGP--CLGYGQA--DATFLVPKR 669
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L ++ I+ G H A T D +Y+WG N GQ G+ G + V P ++
Sbjct: 670 LDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGL-GNNNSPVLLPRKVT---G 725
Query: 137 FDSQNIKVVDVACGSRHTLA 156
FD N + ++ G+ H++A
Sbjct: 726 FD--NHVIYQISVGTSHSIA 743
>gi|403346770|gb|EJY72792.1| hypothetical protein OXYTRI_06078 [Oxytricha trifallax]
Length = 1774
Score = 84.3 bits (207), Expect = 4e-14, Method: Composition-based stats.
Identities = 49/152 (32%), Positives = 86/152 (56%), Gaps = 19/152 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA--LSGLGVVQISAG 91
I+CG++HC+ LT G V SWG G+ G LG+ A ++P+ I + G + I AG
Sbjct: 853 ISCGYEHCMVLTNLGQVASWGFGASGCLGH--GDYVAYLQPKYINQGEIFGKFITYIDAG 910
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVE---------GKLDLVVHDPHPMSWSEDFDSQNI 142
G+H++A +G LY WG ++ GQ+G++ G + L+ P + + F+++
Sbjct: 911 GYHNSAIDIEGNLYMWGRSDVGQLGLKVNQLQKDNYGFVSLI---PQQLKY---FENKQR 964
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
++ VA G H++AL + +++ GWN ++QL
Sbjct: 965 RIKQVALGEAHSIALDHEGAVYSFGWNNHSQL 996
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 22/160 (13%)
Query: 19 MPSRMDHFLDLV--VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR- 75
+P ++ +F + + +A G H +AL EG V+S+G + QLG+ + E +
Sbjct: 952 IPQQLKYFENKQRRIKQVALGEAHSIALDHEGAVYSFGWNNHSQLGFKQEHCEQKAEVKF 1011
Query: 76 ---EIRALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV----EGKLDLVVHD 127
I+ + +I++G S A T Q LY WG + GQ+G+ + +V
Sbjct: 1012 AIYRIQFFDNMPCSKIASGSIFSVAITEQRTNLYIWGSGSNGQLGLGNIKQADQPTLVEF 1071
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
P+ N +V+DV CG + +AL ++ ++G G
Sbjct: 1072 PN-----------NSQVIDVNCGDSNVIALLGNSQVYGWG 1100
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN------MEPREIRALSGLG 84
+T I G H A+ EG ++ WG GQLG + + + P++++
Sbjct: 904 ITYIDAGGYHNSAIDIEGNLYMWGRSDVGQLGLKVNQLQKDNYGFVSLIPQQLKYFENKQ 963
Query: 85 --VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQN 141
+ Q++ G HS A +G +Y++GWNN Q+G + + + + + FD N
Sbjct: 964 RRIKQVALGEAHSIALDHEGAVYSFGWNNHSQLGFKQEHCEQKAEVKFAIYRIQFFD--N 1021
Query: 142 IKVVDVACGSRHTLALCDDNS---LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-- 196
+ +A GS ++A+ + + +WG G N QL +G + Q T + P + +
Sbjct: 1022 MPCSKIASGSIFSVAITEQRTNLYIWGSGSN--GQLGLG-NIKQADQPTLVEFPNNSQVI 1078
Query: 197 --NC 198
NC
Sbjct: 1079 DVNC 1082
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4021 TESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4078
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDP 128
PR I +L G+ VV I+AGG HSA T G L+ WG G++G E +L + D
Sbjct: 4079 DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA 4138
Query: 129 HPMSWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+DVACGS TL L DD+ +W G +Y +L G
Sbjct: 4139 L----------QGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG 4179
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 19/193 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 4186 IPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 4243
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4244 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA----- 4296
Query: 139 SQNIKVVDVACGSRHTLA-----LCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
Q K+ VACGS HTLA + L EYN L + +++ RL +
Sbjct: 4297 LQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQVPMEYNHLQE---IPIMALRNRLVLLH 4353
Query: 194 HVKN--CPIVKLF 204
H+ CP + +F
Sbjct: 4354 HISELFCPCIPMF 4366
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + F L V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ +
Sbjct: 585 PMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLV 642
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L L +V++ G S A T+DG +Y WG + ++G G D H + + +
Sbjct: 643 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLG-HGT------DEH-VRYPKLL 694
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
DS Q KVVDVA GS H LAL DD + G N+ Q
Sbjct: 695 DSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQ 731
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ + V+ +A G H +ALT +G VFSWG G G+LG+ S
Sbjct: 3023 LGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRM 3082
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY+WG G++G H
Sbjct: 3083 NCD---KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLG---------H 3130
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3131 GDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGSEGC 3190
Query: 179 GVSQ 182
V Q
Sbjct: 3191 NVPQ 3194
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL+ G VFSWG G G+LG+ T EP+ I +G VV ++ G +S
Sbjct: 497 HYLALSSNGEVFSWGCGDGGRLGH--GDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYS 554
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T DG LY WG N G++G D PM + + +KVVDVACGS
Sbjct: 555 AAITADGELYTWGRGNYGRLGHGSSEDQTT----PMVVTA---FKGLKVVDVACGSGDAQ 607
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGC--GVSQVSVMTRLSVPEHVKNC 198
TLA+ ++ +W G +Y +L G G ++ +L + VK C
Sbjct: 608 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVC 654
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPR 75
+PS + L V +A G A+T EG +++ G + G+LG SSGT PR
Sbjct: 2977 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPI--PR 3034
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS + V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3035 QITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3090
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3091 -EALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQL 3137
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G ++SWG G G+LG+ + T + P+ ++
Sbjct: 3087 PRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTT--QLRPKLVKV 3144
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +GF+++WG + G++G G V P + E
Sbjct: 3145 LLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGSEGCNV--PQNI---ERL 3199
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3200 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3240
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG VFSWG+G G+LG G++ P+ I
Sbjct: 3139 PKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLG--RGGSEGCNVPQNI 3196
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G D+ V P +
Sbjct: 3197 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG--HGTDVHVRKPQMVE----- 3249
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3250 GLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVN 3294
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +D V D+ACG L LT + +V+SWG+G G+LG G+D P +I
Sbjct: 4133 PKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG--RGGSDGCKIPMKI 4190
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+GLGVV++ G S A T+ G +Y WG + ++G D H +
Sbjct: 4191 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS-------DDHVRRPRQVQ 4243
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q KV+ +A GS H + +D ++ G N+ QL G
Sbjct: 4244 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4283
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++ +P+
Sbjct: 3191 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVRKPQM 3247
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3248 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3302
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3303 LEGQ--KITRVACGSSHSVA 3320
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V +ACG + A+T +G +++WG G+ G+LG+ SS + P + A GL VV ++
Sbjct: 544 VVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSS--EDQTTPMVVTAFKGLKVVDVAC 601
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D +V V
Sbjct: 602 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLVEKLQDLD-----IVKVC 654
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 655 CGSQFSVALTKDGQVYTWGKGDNQ 678
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V DIA G H +T G +F+WG G G+LG+ S + ++P+ + A
Sbjct: 4081 PRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDS--EDQLKPKLVDA 4138
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ ++ +G + T D +++WG + G++G G + PM
Sbjct: 4139 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKI----PMK----I 4190
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4191 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4231
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 17/169 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L VT I C L L+ G V+S S + P I
Sbjct: 433 PIQCKALSSLGVTQIVCSEKGFLILSSSGAVYSQNYKS------------TTLAPMLIHV 480
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS +V+++A G H A + +G +++WG +GG++ G D + M + +
Sbjct: 481 LSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRL---GHGDTTYLEEPKMIGTFNG 537
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
VV VACGS ++ A+ D L+ G Y +L G Q + M
Sbjct: 538 KQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPM 586
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +D V D+A G HCLALT +G V SW GS +L + + +P+ +
Sbjct: 691 PKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSW--GSNDKLQHFDTLFSNKKQPKALPG 748
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
L+ +V IS G S + W++ + V ++ VV D PM++ +
Sbjct: 749 LNSKHIVGISCGPGQS-----------FAWSSSSEWSVGKRVPFVV-DVCPMTFEQ 792
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3951 GTIYGWGHNHRGQLGG-IEGAKVKV-PTSTEALATLRPVQLIGGEQTLFAVTADGKLYAT 4008
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E I+ V V G +H LAL + ++ G
Sbjct: 4009 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWG 4063
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4064 EAEDGKLGHG----NRSPCDRPRVIESLRGVEVVDIAAGGAHSA 4103
>gi|182416055|ref|YP_001821121.1| cell surface receptor IPT/TIG domain-containing protein [Opitutus
terrae PB90-1]
gi|177843269|gb|ACB77521.1| cell surface receptor IPT/TIG domain protein [Opitutus terrae
PB90-1]
Length = 1848
Score = 84.3 bits (207), Expect = 4e-14, Method: Composition-based stats.
Identities = 58/146 (39%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN--MEPREIRALSGLGVVQI 88
+ IA G++H LAL +GIV++WG+ S GQLG S TD+ M L+G VV I
Sbjct: 233 IIAIATGYEHSLALASDGIVYAWGDNSEGQLG-DGSTTDSKVPMAVDRTGVLTGKTVVAI 291
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+AG HS A DG +YAWG N Q+G D V P P+ +E V DVA
Sbjct: 292 AAGRNHSLAVASDGTVYAWGDNYYAQLGDGSLTDSSV--PVPVDLTE---LAGKSVADVA 346
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
G RH+LA D +++ G N Q+
Sbjct: 347 GGDRHSLAQASDGTVYAWGDNTNGQM 372
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
V IA G +H LA+ +G V++WG+ QLG S TD+++ P ++ L+G V ++
Sbjct: 288 VVAIAAGRNHSLAVASDGTVYAWGDNYYAQLG-DGSLTDSSVPVPVDLTELAGKSVADVA 346
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH-DPHPMSWSEDFDSQNIKVVDVA 148
G HS A+ DG +YAWG N GQ+G D + H P P+S + +V VA
Sbjct: 347 GGDRHSLAQASDGTVYAWGDNTNGQMG-----DTIAHLKPAPVSVTGGSALAGKTIVAVA 401
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
G H LAL D ++ G+N QL
Sbjct: 402 AGGYHNLALASDGTVCTWGYNYNGQL 427
Score = 80.1 bits (196), Expect = 7e-13, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG--TDANMEPREIR---ALSGLGVVQI 88
+A + H LAL +G V++WG + GQLG S G TD + P + L+G ++ I
Sbjct: 177 LATSYRHSLALASDGTVYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGKTIIAI 236
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G HS A DG +YAWG N+ GQ+G D V PM+ VV +A
Sbjct: 237 ATGYEHSLALASDGIVYAWGDNSEGQLGDGSTTDSKV----PMAVDRTGVLTGKTVVAIA 292
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G H+LA+ D +++ G N Y QL G
Sbjct: 293 AGRNHSLAVASDGTVYAWGDNYYAQLGDG 321
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR-----ALSGLGV 85
V D+A G H LA +G V++WG+ + GQ+G T A+++P + AL+G +
Sbjct: 342 VADVAGGDRHSLAQASDGTVYAWGDNTNGQMG----DTIAHLKPAPVSVTGGSALAGKTI 397
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE----GKLDLVVHDPHPMSWSEDFDSQN 141
V ++AGG+H+ A DG + WG+N GQ+G G+ V P++ +
Sbjct: 398 VAVAAGGYHNLALASDGTVCTWGYNYNGQLGNNSSGAGEKSTV-----PIAVNSYGALPG 452
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+V V G H+LAL D +L G+N QL
Sbjct: 453 KTIVAVGAGVSHSLALASDGALCTWGFNSQGQL 485
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 7/135 (5%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRA-----LSGLGVVQISAGGWHSAARTQDGF 103
+ ++WG+ S+GQLG + G+ N + A L+G +V ++ HS A DG
Sbjct: 133 VSYAWGDNSKGQLGNGTGGSMGNKSVVPVAADRSGVLAGKTLVALATSYRHSLALASDGT 192
Query: 104 LYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+YAWG+N GQ+G G L + P++ ++ +A G H+LAL D
Sbjct: 193 VYAWGYNANGQLGNGSGGLSTDISKV-PVAVDMTGVLAGKTIIAIATGYEHSLALASDGI 251
Query: 163 LWGCGWNEYNQLSMG 177
++ G N QL G
Sbjct: 252 VYAWGDNSEGQLGDG 266
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIR---ALSGLGVV 86
+ +A G H LAL +G V +WG GQLG SSG + + P + AL G +V
Sbjct: 397 IVAVAAGGYHNLALASDGTVCTWGYNYNGQLGNNSSGAGEKSTVPIAVNSYGALPGKTIV 456
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+ AG HS A DG L WG+N+ GQ+G
Sbjct: 457 AVGAGVSHSLALASDGALCTWGFNSQGQLG 486
Score = 36.6 bits (83), Expect = 8.4, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 82 GLGVVQISAG---GWHSAARTQDGFL-YAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
G G+ + AG G R G + YAWG N+ GQ+G + P++
Sbjct: 108 GSGLTPVVAGAFAGGQRYLRVPPGTVSYAWGDNSKGQLGNGTGGSMGNKSVVPVAADRSG 167
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG-----VSQVSVMTRLS 190
+V +A RH+LAL D +++ G+N QL G G +S+V V ++
Sbjct: 168 VLAGKTLVALATSYRHSLALASDGTVYAWGYNANGQLGNGSGGLSTDISKVPVAVDMT 225
>gi|58268916|ref|XP_571614.1| pim1 protein (poly(a)+ RNA transport protein 2) [Cryptococcus
neoformans var. neoformans JEC21]
gi|134112620|ref|XP_774853.1| hypothetical protein CNBF0180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257501|gb|EAL20206.1| hypothetical protein CNBF0180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227849|gb|AAW44307.1| pim1 protein (poly(a)+ RNA transport protein 2), putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 590
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA--NMEPR 75
+ P + + +T I+CG DH LALT G V+ WG G QLG +EP
Sbjct: 254 YTPISLPALAKVQITQISCGADHVLALTTIGHVYVWGKGEENQLGRRIISRRRINGLEPE 313
Query: 76 EIRALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ GL +V ++AG +HS A G +Y WG N Q GV D+++ P +
Sbjct: 314 RL----GLRNIVHVAAGIYHSFAVDNKGVVYGWGLNTFHQTGVAEHQDMII-TPTVVDAL 368
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
KV+ V+ G H+L L D+ +WGCG + N+L +
Sbjct: 369 HPDKHNGSKVIKVSGGEHHSLFLFDNGEVWGCGRCDANELGL 410
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 65/158 (41%), Gaps = 20/158 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGY-----PSSGTDANMEPRE--------IRAL 80
+ CG H LA+ + G V SWG LG P M P E + L
Sbjct: 143 VYCGGMHTLAIDEAGRVRSWGINDNAALGRITTDVPDPKNPDEMIPNEDLESYPYVVETL 202
Query: 81 --SGLGVVQISAGGWHSAARTQDGFLYAWG--WNNGGQVGVEGKLDLVVHDPHPMSWSED 136
G VQ++AG S A + G L AWG +N G +G +G P+S
Sbjct: 203 EKEGFRAVQVAAGDSISVAISDKGELRAWGSFRSNEGILGFDGVPGHPKFQYTPISLPA- 261
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+++ ++CG+ H LAL ++ G E NQL
Sbjct: 262 --LAKVQITQISCGADHVLALTTIGHVYVWGKGEENQL 297
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA--LSGLG 84
D V DI+ G H LA+++ G +++WG G+ QLG G++ E P +R+ L
Sbjct: 510 DNPVVDISAGMRHNLAVSKSGHLYAWGYGNLAQLGL---GSEEVAEVPSLVRSKLLRPYR 566
Query: 85 VVQISAGGWHSAA 97
V +SAGG H A
Sbjct: 567 SVTVSAGGQHCVA 579
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 63/162 (38%), Gaps = 33/162 (20%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEP----------------REIRALSGLGVVQI 88
T +F WG G +GQ G D P R+ + SG G+ +
Sbjct: 85 TPHNALFVWGTGDQGQFGLGPDNLDEIGRPKLHSWFEEQIEEGKLSRDGKPGSG-GLESV 143
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH---PMSWSEDFDS------ 139
GG H+ A + G + +WG N+ + G++ V DP M +ED +S
Sbjct: 144 YCGGMHTLAIDEAGRVRSWGINDNAAL---GRITTDVPDPKNPDEMIPNEDLESYPYVVE 200
Query: 140 ----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + V VA G ++A+ D L G N+ +G
Sbjct: 201 TLEKEGFRAVQVAAGDSISVAISDKGELRAWGSFRSNEGILG 242
>gi|402869930|ref|XP_003898996.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Papio anubis]
Length = 932
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 9 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 63
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D
Sbjct: 64 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-----KDRESPCHV 118
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CG HT L ++ G QL
Sbjct: 119 KLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 156
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 63 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 120
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 121 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 176
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 177 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 204
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 126 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 183
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 184 GRQHTLAFVPSSGLIYAFGCGARGQLGT 211
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
D+ PR I+ L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P
Sbjct: 5 DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------P 58
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
S + I + VA G H+ AL +++G G N QL +
Sbjct: 59 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 106
>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
Length = 614
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 11/202 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++F V +ACG + +A ++G V ++G GQLG S+ + R
Sbjct: 216 VPRPVEYFFRRPVLAVACGQHYTIASLRDGGVVAFGKNDHGQLGLDSTSEPVSQPTRLAA 275
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L L V Q+S G H+A T+DG +Y +G N+ GQ+G+ K+ H P
Sbjct: 276 PLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKM----HMARPARVES--- 328
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+++ VACG HTL L DD ++ G N + QL + V +S + ++N
Sbjct: 329 LARMRITQVACGCYHTLVLSDDGKVFPFGRNNHGQLGLETSVDCLSP----QLISTLRNK 384
Query: 199 PIVKLFAEHWNSARLSVPEHAK 220
+ K+ A ++S L P +
Sbjct: 385 TVTKVAAGFYHSVCLVGPTEGE 406
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V D+ C + H + G +++ G GQLG + + PR + V+ ++
Sbjct: 175 VADVGCSYFHTAIVMDNGDLYACGCNDYGQLGL-GDHRNGELVPRPVEYFFRRPVLAVAC 233
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G ++ A +DG + A+G N+ GQ+G++ + V P + D + V ++CG
Sbjct: 234 GQHYTIASLRDGGVVAFGKNDHGQLGLDSTSEPV---SQPTRLAAPLD--RLVVPQLSCG 288
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
HT + +D +++ G N+Y QL +G
Sbjct: 289 YHHTAVVTEDGAVYTFGRNDYGQLGLG 315
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 21/154 (13%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQ--LGYPSSGTDANMEP-----REIRALSGL 83
V D+ACG + L ++G V++ G GQ +G P R +R SG
Sbjct: 69 VVDVACGNEQTAILFEDGDVYTCGYNDSGQCAIGTTERVPTLRFSPGLSSNRTVRIFSG- 127
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
G H AA +G LY G+N GQ+G+ ++ + E+ + +
Sbjct: 128 ------NGSEHLAALHANGNLYTVGFNMRGQLGLGSSTTVM-----EATLVEELAGK--R 174
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V DV C HT + D+ L+ CG N+Y QL +G
Sbjct: 175 VADVGCSYFHTAIVMDNGDLYACGCNDYGQLGLG 208
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 11/146 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALS--GLGVVQISAGGWHSAARTQDGFLYAW 107
V+S+G + G+L + TD + R S G VV ++ G +A +DG +Y
Sbjct: 33 VYSFGQNTYGELALGDT-TDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGDVYTC 91
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+N+ GQ + G + V + +S S + GS H AL + +L+ G
Sbjct: 92 GYNDSGQCAI-GTTERV----PTLRFSPGLSSNRTVRIFSGNGSEHLAALHANGNLYTVG 146
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPE 193
+N QL +G S +VM V E
Sbjct: 147 FNMRGQLGLG---SSTTVMEATLVEE 169
>gi|332233512|ref|XP_003265946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Nomascus leucogenys]
Length = 932
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 9 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 63
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D
Sbjct: 64 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-----KDRESPCHV 118
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CG HT L ++ G QL
Sbjct: 119 KLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 156
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 63 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 120
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 121 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 176
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 177 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 204
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 126 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 183
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 184 GRQHTLAFVPSSGLIYAFGCGARGQLGT 211
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
D+ PR I+ L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P
Sbjct: 5 DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------P 58
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
S + I + VA G H+ AL +++G G N QL +
Sbjct: 59 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 106
>gi|410110896|ref|NP_001258531.1| probable E3 ubiquitin-protein ligase HERC3 isoform 2 [Homo sapiens]
gi|397480081|ref|XP_003811324.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pan paniscus]
gi|426344935|ref|XP_004039159.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Gorilla gorilla gorilla]
gi|194382994|dbj|BAG59053.1| unnamed protein product [Homo sapiens]
Length = 932
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 9 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 63
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D
Sbjct: 64 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-----KDRESPCHV 118
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CG HT L ++ G QL
Sbjct: 119 KLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 156
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 63 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 120
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 121 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 176
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 177 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 204
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 126 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 183
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 184 GRQHTLAFVPSSGLIYAFGCGARGQLGT 211
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
D+ PR I+ L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P
Sbjct: 5 DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------P 58
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
S + I + VA G H+ AL +++G G N QL +
Sbjct: 59 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 106
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 9/153 (5%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H P +D + + IACG H + LT EG V++WG G G+LG+ +G PR +
Sbjct: 23 HRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNG--WKFVPRLV 80
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G + Q++ G +H+AA T G LY WG GG G G + H + +
Sbjct: 81 EELRGKNIRQVTCGSYHTAAVTVSGDLYTWG---GGMYGKLGHGNETGHSTPFLVET--- 134
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
+ ++V VACGSRHT+ L ++ ++ G E
Sbjct: 135 -LKGMQVRQVACGSRHTVVLLENKDVYTWGDKE 166
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 10/145 (6%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+V ACGF H AL++ G VF++G G G+LG+ S R + AL+G V Q++
Sbjct: 193 IVQISACGF-HTAALSEFGEVFTFGEGKFGRLGHNSERNQP--VARFVEALAGKRVKQVA 249
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GG+H+AA T+ G +Y WG GQ+G K++ V S E VV + C
Sbjct: 250 CGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTV-PTRVESLVEKL------VVQITC 302
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQL 174
G HT+AL D ++ G ++ +L
Sbjct: 303 GWSHTVALTDTGEVYTWGNGDHGKL 327
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V +ACG H + L + V++WG+ G G+ + + P +
Sbjct: 129 PFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYL-PCPVEE 187
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G +VQISA G+H+AA ++ G ++ +G G++G + + V + E
Sbjct: 188 LRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPV-----ARFVEALAG 242
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
+ +K VACG HT A+ + ++ G E+ QL G V++ +V TR+
Sbjct: 243 KRVK--QVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNK-TVPTRVE 290
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
V +ACG H A+T+ G V++WG G GQLG+ G N P + +L VVQI+
Sbjct: 245 VKQVACGGFHTAAVTETGEVYTWGGGEHGQLGH---GDKVNKTVPTRVESLVEKLVVQIT 301
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVA 148
G H+ A T G +Y WG + G++G +D ++ + D + +V+ VA
Sbjct: 302 CGWSHTVALTDTGEVYTWGNGDHGKLG--------HNDTTKVTLPKLVDVLEGKRVISVA 353
Query: 149 CGSRHTLALCD 159
+ HT+AL D
Sbjct: 354 SYNEHTVALVD 364
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V+SWG G GQLG T P I AL+ +VQI+ G H+ T +G +Y WG
Sbjct: 3 VYSWGRGEDGQLGLGD--TSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGR 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSW----SEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
+ G++G H + + E+ +NI+ V CGS HT A+ L+
Sbjct: 61 GDDGRLG---------HGDNGWKFVPRLVEELRGKNIR--QVTCGSYHTAAVTVSGDLYT 109
Query: 166 CGWNEYNQLSMG 177
G Y +L G
Sbjct: 110 WGGGMYGKLGHG 121
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+R++ ++ +V I CG+ H +ALT G V++WGNG G+LG+ + T P+ +
Sbjct: 285 VPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGH--NDTTKVTLPKLVD 342
Query: 79 ALSGLGVVQISAGGWHSAA 97
L G V+ +++ H+ A
Sbjct: 343 VLEGKRVISVASYNEHTVA 361
>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
Nc14]
Length = 554
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 88/154 (57%), Gaps = 14/154 (9%)
Query: 29 LVVTDIA-----CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
LV DIA G +H A+++ G ++++G SRGQLG+ S T+ P +I+ L+
Sbjct: 93 LVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHGS--TNPITTPTKIKDLASY 150
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
VV+++ +H+ T +G LYA+G N+ GQ+G++ +D H P P+++ F+S+
Sbjct: 151 HVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDR--HVPVPLTY---FNSR--P 203
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V+ VACG HT+ + + G N++ QL G
Sbjct: 204 VLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTG 237
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ V ++AC + H + +T EG ++++G GQLG G D ++ P +
Sbjct: 141 PTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGI-DDGMDRHV-PVPLTY 198
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+ V+ ++ G H+ +G + A+G N+ GQ+G LD + P + DS
Sbjct: 199 FNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLD---YHASPSLLAAPLDS 255
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V +ACG HT+AL + S++ G N+Y QL G
Sbjct: 256 --LVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHG 291
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 77/140 (55%), Gaps = 12/140 (8%)
Query: 20 PSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
PS + LD LVV +ACG+ H +AL + G V+S+G GQLG+ G ++ EP I
Sbjct: 246 PSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGH---GHRHHLSEPTLI 302
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+AL+ VQ++ G +H+ ++DG +Y +G NN GQ+G+ +D P ++ D
Sbjct: 303 KALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCT--SPQIIASLRD- 359
Query: 138 DSQNIKVVDVACGSRHTLAL 157
VV VA G H++ L
Sbjct: 360 ----KFVVKVASGFYHSICL 375
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H+P + +F V +ACG H + G V ++G GQLG + D + P +
Sbjct: 191 HVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYT-LDYHASPSLL 249
Query: 78 RA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
A L L V ++ G +H+ A + G +Y++G N+ GQ+G G H H +
Sbjct: 250 AAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLG-HG------HRHHLSEPTLI 302
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V V CG HTL L +D ++ G N + QL +G
Sbjct: 303 KALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLG 343
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + ++ + D+ACG + L + G VF+ G GQ G S+ ++
Sbjct: 34 LPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQCGIGSTSRVQSLRLVPAL 93
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+ ++ + G H A ++ G LY +G+N+ GQ+G G + + + ++ D
Sbjct: 94 VTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLG-HGSTNPIT------TPTKIKD 146
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
+ VV+VAC HT+ + + +L+ G N+ QL + G+ +
Sbjct: 147 LASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDR 190
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDA 70
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ S S D
Sbjct: 2330 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCD- 2388
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P
Sbjct: 2389 --RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKL 2444
Query: 131 MSWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ Q +VV +ACGS TL L DD+++W G +Y +L G
Sbjct: 2445 VEAL-----QGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 2488
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 2494 KVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 2551
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G + I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 2552 QGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 2605
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 2606 -LQGKKVNRVACGSAHTLA 2623
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + L V +A G A+T EG V++ G + G+LG S + PR+
Sbjct: 1285 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPL-PRQ 1343
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 1344 VTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI--- 1398
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 1399 EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQL 1445
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 1447 PKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 1504
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 1505 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 1557
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 1558 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 1602
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 83/183 (45%), Gaps = 21/183 (11%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 1331 LGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 1390
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
+PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 1391 N--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------HG 1439
Query: 128 PHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCG 179
+ +VV VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 1440 DTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 1499
Query: 180 VSQ 182
+ Q
Sbjct: 1500 IPQ 1502
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ T ++P+ ++
Sbjct: 1395 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH--GDTTTQLKPKMVKV 1452
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VVQ++ G + A T +G +++WG + G++G G + P + E
Sbjct: 1453 LLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 1507
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 1508 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 1548
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 1499 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 1555
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 1556 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 1610
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 1611 LEGQ--KITRVACGSSHSVA 1628
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V IACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 2453 VVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVRV 2510
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q K + +A
Sbjct: 2511 ECGSQFSVALTKAGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKAIAIA 2563
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 2564 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 2592
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 2390 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 2447
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 2448 LQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 2499
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 2500 DSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHG 2540
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 2260 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 2317
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 2318 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 2372
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 2373 EAEDGKLGHG----SRSPCDRPRVIESLRGIEVVDVAAGGAHSA 2412
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L VV I
Sbjct: 171 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKTVVNI 227
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 228 ACGQMCSMAVVDTGEVYVWGYNGNGQLG----LGSGGNQPTPCRIAA---LQGIRVQRVA 280
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 281 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 309
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 16/168 (9%)
Query: 20 PSRMDHFLDLVVTDIAC----GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+D L IAC H + T EG VF+WG+ + QLG + T+ + P
Sbjct: 106 PRRLD---SLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPC 160
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 161 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVT 216
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
QN VV++ACG ++A+ D ++ G+N QL +G G +Q
Sbjct: 217 GCL--QNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQ 262
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + V +IACG +A+ G V+ WG GQLG S G P I
Sbjct: 211 IPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPT--PCRI 268
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 269 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVIVEKD- 325
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 326 -----RIIEIAACHSAHTSA 340
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 265 PCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVI 321
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 322 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 359
>gi|157124777|ref|XP_001660519.1| hypothetical protein AaeL_AAEL009960 [Aedes aegypti]
gi|108873890|gb|EAT38115.1| AAEL009960-PA, partial [Aedes aegypti]
Length = 736
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H P+R+D + A G + T G+V S G+ S G LG+ + + P+ +
Sbjct: 393 HYPTRVDAIQRYNIIGAATGNGFTMFWTNLGVVLSCGDNSSGCLGH--GNQISLLVPKIV 450
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L+ + + Q++ G H A + G LY WG +N G +G+ GK LV +P + S+
Sbjct: 451 QKLNNIRIRQVACGSQHVVALSDGGHLYTWGSSNDGALGL-GKQMLVSAEPRRLIVSQMI 509
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS-VPEHVK 196
QNI+ D+ CG T+ L + S + CG N YN+L G ++Q++ + +++ V E +
Sbjct: 510 --QNIR--DIYCGPDCTVILTEGGSCYCCGSNRYNRLGFGTKITQLTALQKVTFVAEKIL 565
Query: 197 NCPIVKLF 204
+ + + F
Sbjct: 566 SVSVAETF 573
>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 816
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 24/173 (13%)
Query: 20 PSRMDHFLDLVVTDIACG--FDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P+ + D + +ACG + H L +T +G V+SWG+G G+LG G+D + PR I
Sbjct: 610 PTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLG--RGGSDGSKLPRLI 667
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L + +VQ+ G S A ++DG +Y WG G ++G HP + F
Sbjct: 668 EKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLG------------HPTEENVRF 715
Query: 138 DS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
++ KVV V+ G H LAL D ++G G NE Q+ C S++ V
Sbjct: 716 PEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQI---CDSSELFV 765
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P M D V IA + H LALT++ V+SWGNG G+LG+ + T EP I
Sbjct: 504 PQEMTALDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKE--EPTLI 561
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+AL G ++ + GG +SAA + +G LY WG N G++G D + P S
Sbjct: 562 QALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLT----PTMISALS 617
Query: 138 DSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
D IK VACGS HTL + ++ G +Y +L G G S S + RL E +
Sbjct: 618 DEHIIK---VACGSFYAHTLCITSQGKVYSWGDGDYGKL--GRGGSDGSKLPRLI--EKL 670
Query: 196 KNCPIVKLFAEHWNSARLSVPEH 218
+N IV+++ S LS H
Sbjct: 671 QNVKIVQVYCGAQFSVALSEDGH 693
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 11/145 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
+P ++ ++ + + CG +AL+++G V++WG G +LG+P T+ N+ P
Sbjct: 662 KLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHP---TEENVRFPEM 718
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L VV +S G H A T G +Y WG N Q+ +L V P + E
Sbjct: 719 VEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSS--ELFVQQPRLI---EA 773
Query: 137 FDSQNIKVVDVACGSRHTLALCDDN 161
Q KVV V CG + A DDN
Sbjct: 774 LKGQ--KVVGVCCGPAQSFAWTDDN 796
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 79/149 (53%), Gaps = 23/149 (15%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ D+ CG + A++ G +++WG G+ G+LG+ ++ + + P I ALS +++++
Sbjct: 569 IIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTA--EDCLTPTMISALSDEHIIKVAC 626
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEG----KLDLVVHDPHPMSWSEDFDSQNIKV 144
G + H+ T G +Y+WG + G++G G KL ++ QN+K+
Sbjct: 627 GSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIE-----------KLQNVKI 675
Query: 145 VDVACGSRHTLALCDDNSLW----GCGWN 169
V V CG++ ++AL +D ++ G GW
Sbjct: 676 VQVYCGAQFSVALSEDGHVYTWGKGEGWK 704
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P D +L + I C L LTQ G VF Y SS T P+E+ A
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVF---------FMYYSSDTQC---PQEMTA 509
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L V++I+A G H A T+D +Y+WG +GG++G G +P + +
Sbjct: 510 LDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLG-HGDTS-TKEEPTLIQALKGK 567
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D ++DV CG ++ A+ + +L+ G Y +L G
Sbjct: 568 D-----IIDVECGGTYSAAISANGALYTWGRGNYGRLGHG 602
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKAVVNI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I V VA
Sbjct: 211 ACGQMCSMAVVDAGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIHVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
CG HTL L D+ ++ G N Y QL G +Q S T +SV E + I + H
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-SYPTPISV-EKDRIIEIAACHSTHT 321
Query: 209 NSAR 212
++A+
Sbjct: 322 SAAK 325
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCYIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ D ++ G+N QL +G
Sbjct: 203 --QNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLG 240
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N +
Sbjct: 248 PCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPIS 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGNVYMWGQCRGQSV 342
>gi|197121464|ref|YP_002133415.1| chromosome condensation regulator RCC1 [Anaeromyxobacter sp. K]
gi|196171313|gb|ACG72286.1| regulator of chromosome condensation RCC1 [Anaeromyxobacter sp. K]
Length = 714
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 88/183 (48%), Gaps = 37/183 (20%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+A G+ H LA+ +G ++SWG+ S GQLG PS + R A G G V+++AG W
Sbjct: 440 VAAGYQHSLAVAADGTLWSWGSNSSGQLGDPS------VASRHTPAQIGSGFVRVAAGRW 493
Query: 94 HSAARTQDGFLYAWGWNNGG------QVGVEGKLDLVVHDPHPMSWSED----------- 136
HSA DG L+ WG + GG QVG G L++ H ++ +ED
Sbjct: 494 HSAGVKADGTLWIWGGDVGGTYDTPTQVG-SGFLEVAAGHEHTVALAEDGTLWTWGNNGL 552
Query: 137 -------FDSQNIKV------VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
FD + V V VA G+ HT+AL D +LW CG N QL G S
Sbjct: 553 GQLCDGTFDQRIAPVQVGTGFVHVAAGAYHTVALEADGTLWACGENGAGQLGDGTTTSSA 612
Query: 184 SVM 186
+++
Sbjct: 613 ALL 615
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+A G H A+ +G ++WGN GQ G D + + A G G +++AG
Sbjct: 343 VAVGSRHMAAIAADGSRWAWGNDDFGQAG------DGSWSRSAVPAQVGSGFARVAAGLG 396
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS DG L+AWG N+ GQV G P+ E F VA G +H
Sbjct: 397 HSLGVKADGTLWAWGLNDMGQV---GDGTDAPQRGAPVRIGEAF-------AQVAAGYQH 446
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
+LA+ D +LW G N QL SV +R + P + + V++ A W+SA
Sbjct: 447 SLAVAADGTLWSWGSNSSGQL------GDPSVASRHT-PAQIGSG-FVRVAAGRWHSA 496
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 17/132 (12%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGG 92
++A G +H +AL ++G +++WGN GQL D + R G G V ++AG
Sbjct: 527 EVAAGHEHTVALAEDGTLWTWGNNGLGQL------CDGTFDQRIAPVQVGTGFVHVAAGA 580
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
+H+ A DG L+A G N GQ+G D S S V+ G
Sbjct: 581 YHTVALEADGTLWACGENGAGQLG----------DGTTTS-SAALLGVGTGFAAVSAGEL 629
Query: 153 HTLALCDDNSLW 164
HT+A+ D +LW
Sbjct: 630 HTVAVKADGTLW 641
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 31/172 (18%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG 91
T +A G H A+ +G ++WG+ + GQLG + + P ++ V++I+AG
Sbjct: 193 TRVAVGDWHAAAVKADGSAWTWGSNASGQLGDGTIASTPRPTPAQVLPAE---VMEIAAG 249
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A DG + WG N GQ+G G+ V+ V +A
Sbjct: 250 GAHTVALRSDGSIMVWGTNRDGQLGDGTTTGRRSPVLLG-------------GGGFVQIA 296
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLS------------MGCGVSQVSVMTR 188
+ HT AL D +LW CG NE QL +G G +QV+V +R
Sbjct: 297 AAANHTAALKADGTLWTCGANESGQLGDGTFASRSWLTRVGSGFAQVAVGSR 348
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 41 CLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQ 100
LA+ +G +++WG+ +G +G SG D + P +I G G +++ G WH+AA
Sbjct: 154 SLAVKTDGTLWAWGSNRQGLVG-DGSGLDQHA-PVQI----GTGFTRVAVGDWHAAAVKA 207
Query: 101 DGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
DG + WG N GQ+G +G + P P +V+++A G HT+AL D
Sbjct: 208 DGSAWTWGSNASGQLG-DGT---IASTPRPTP----AQVLPAEVMEIAAGGAHTVALRSD 259
Query: 161 NSLWGCGWNEYNQLSMGC 178
S+ G N QL G
Sbjct: 260 GSIMVWGTNRDGQLGDGT 277
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 72/171 (42%), Gaps = 23/171 (13%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG 84
L V +IA G H +AL +G + WG GQLG GT R L G G
Sbjct: 237 QVLPAEVMEIAAGGAHTVALRSDGSIMVWGTNRDGQLG---DGTTTGR--RSPVLLGGGG 291
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VQI+A H+AA DG L+ G N GQ+G +G SW S
Sbjct: 292 FVQIAAAANHTAALKADGTLWTCGANESGQLG-DGTF-------ASRSWLTRVGS---GF 340
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
VA GSRH A+ D S W G +++ Q G +R +VP V
Sbjct: 341 AQVAVGSRHMAAIAADGSRWAWGNDDFGQAGDGS-------WSRSAVPAQV 384
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 68/170 (40%), Gaps = 26/170 (15%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG-GWH---S 95
+ LA+ +G +++WG+ + GQLG D PR G G +++A W S
Sbjct: 101 YTLAVKADGTLWAWGDNASGQLG------DGTTTPRAAPVQIGAGFAEVAASRNWLEPVS 154
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTL 155
A DG L+AWG N G VG LD H P + VA G H
Sbjct: 155 LAVKTDGTLWAWGSNRQGLVGDGSGLDQ--HAPVQI---------GTGFTRVAVGDWHAA 203
Query: 156 ALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
A+ D S W G N QL G S T P V ++++ A
Sbjct: 204 AVKADGSAWTWGSNASGQLGDGTIAS-----TPRPTPAQVLPAEVMEIAA 248
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L V+ I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVMNI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
S G S A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 SCGQMCSMAVVDTGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T +G VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN V++++CG ++A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +I+CG +A+ G V+ WG GQLG SSG P +
Sbjct: 194 IPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSAHTSA 323
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG +++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG---TGNKSNQSYPTPVV 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 342
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 95/187 (50%), Gaps = 18/187 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4027 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGH--GNRSPC 4084
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV I+AGG HSA T G L+ WG G++G D + P +
Sbjct: 4085 DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLV 4142
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVS 184
+ + +V+D+ACGS TL L DD+++W G +Y +L S GC V ++
Sbjct: 4143 EALQGY-----RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 4197
Query: 185 VMTRLSV 191
+T L V
Sbjct: 4198 SLTGLGV 4204
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4191 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4248
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4249 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4302
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4303 -LQGKKINRVACGSAHTLA 4320
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 77/144 (53%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL+ G VFSWG G G+LG+ T EP+ I ALSG VV I+ G +S
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGH--GDTVPLEEPKMISALSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DV+CGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDQTI----PMLVT---GLKGLKVIDVSCGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ + VV +A G H +ALT +G VFSWG G G+LG+ S
Sbjct: 3030 LGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRM 3089
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3090 NCD---KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG---------H 3137
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3138 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3197
Query: 179 GVSQ 182
+ Q
Sbjct: 3198 NIPQ 3201
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 29 LVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D++CG LA+T+ G V+SWG+G G+LG G+D P+ I L L +V
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDIV 661
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y WG + ++G G + H +P E + KV+D
Sbjct: 662 KVRCGSQFSIALTKDGQVYTWGKGDNQRLG-HGTEE---HVRYP-KLLEGLKGK--KVID 714
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 715 VAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2984 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3041
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3042 QITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3097
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3098 -EALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLK 3145
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3203
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G D+ V P +
Sbjct: 3204 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG--HGTDVHVRKPQVVE----- 3256
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3257 GLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVN 3301
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ V DIACG L LT + V+SWG+G G+LG G+D P +I
Sbjct: 4139 PKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKI 4196
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+GLGVV++ G S A T+ G +Y WG + ++G G D H +
Sbjct: 4197 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQ 4249
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q KV+ +A GS H + +D ++ G N+ QL G
Sbjct: 4250 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4289
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++ +P+
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVRKPQV 3254
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3255 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3309
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3310 LEGQ--KITRVACGSSHSVA 3327
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3094 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3151
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3152 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3206
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3207 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3247
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS + P + L GL V+ +S
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS--EDQTIPMLVTGLKGLKVIDVSC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D +V V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----IVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYTWGKGDNQ 688
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL + + CG +ALT++G V++WG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L + P P +
Sbjct: 706 GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRITKPEPAALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V DIA G H +T G +F+WG G G+LG+ S + ++P+ + A
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDS--EDQLKPKLVEA 4144
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4196
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4197 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4237
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L V +AC L L++ G V++ S + P+ +++
Sbjct: 443 PIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYNSD------------TLGPQLVQS 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A + +G +++WG +GG++ G D V + M +
Sbjct: 491 LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRL---GHGDTVPLEEPKMISALSG 547
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
VV +ACGS ++ A+ + L+ G Y +L G Q M
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3957 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4015 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWG 4069
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4070 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDIAAGGAHSA 4109
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ +I CG A++ G V++WGN GQLG S A P ++
Sbjct: 244 PKKIPDLQNII--NIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQA--RPNQVTG 299
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
G ++ IS G AA + +G L+ WG+ N GQ+G + DL + P + + E
Sbjct: 300 FGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNRNDL--YAPKQIEFKE---- 353
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV-SQVSVMTRLSVPEHVKNC 198
K++ V CG HT L +N L+ G QL +G + S+ ++ T + E K
Sbjct: 354 ---KIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEFFKKM 410
Query: 199 PIV 201
+V
Sbjct: 411 KVV 413
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 6/140 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ F + +I+CG + AL+ EG +F+WG G+ GQLG+ S + P++I
Sbjct: 294 PNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGH--SNRNDLYAPKQIEF 351
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
++++ GG H+A TQ+ LY +G N GQ+G+ ++ E F
Sbjct: 352 KE--KIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEFF-- 407
Query: 140 QNIKVVDVACGSRHTLALCD 159
+ +KVVDV CG +TLA+ +
Sbjct: 408 KKMKVVDVTCGGEYTLAITE 427
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 91/185 (49%), Gaps = 26/185 (14%)
Query: 17 FHM--PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG------- 67
F+M P ++ ++ + I+CG H A++Q+G +++WGN G+LG+
Sbjct: 116 FNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEI 175
Query: 68 ---------TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
+ +M P ++++L+G+ Q+S GG + T++G +Y++G + GQ+G +
Sbjct: 176 KRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQ 235
Query: 119 GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
+ + P + D QNI +++ CG + + A+ ++ G N++ QL
Sbjct: 236 SE-ETGNFQPKKIP-----DLQNI--INIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNNQ 287
Query: 179 GVSQV 183
+ Q
Sbjct: 288 SIYQA 292
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 15/170 (8%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ D + + +AL+Q+G V++WG G LG+ + ++P +
Sbjct: 65 YSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELV 124
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L + + QIS G +H AA +QDG LY WG + G++G E + + ++++
Sbjct: 125 EKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHE--IQQKSNKVEIKRGNQNY 182
Query: 138 DS-------------QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D IK V+CG + T+ L ++ ++ G + QL
Sbjct: 183 DYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQL 232
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V++WG G+ GQLG + + P+E+ LS ++++ A S A +QDG +Y WG
Sbjct: 45 VYAWGYGNFGQLGLANE--NNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGK 102
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N G G+ G D+ + E + NI++ ++CG H A+ D L+ G
Sbjct: 103 NKG---GILGHYDITSFNMIQPELVEKLE--NIQIKQISCGPFHMAAISQDGELYTWGNK 157
Query: 170 EYNQL 174
++ +L
Sbjct: 158 DHGKL 162
>gi|330797026|ref|XP_003286564.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
gi|325083469|gb|EGC36921.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
Length = 1440
Score = 84.0 bits (206), Expect = 5e-14, Method: Composition-based stats.
Identities = 59/170 (34%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++CGF+H L LT E +FS G GQLG + A P + L V++I A
Sbjct: 76 VVSVSCGFNHTLLLTSEYKIFSMGFNQVGQLGIENVVDSA--VPLPVDTLQKCNVIKIKA 133
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS---------QN 141
G SAA T G LY WG ++ GQ+G GK++ + P + E F S QN
Sbjct: 134 GNNISAAITDKGDLYIWGTSSFGQLG-NGKMNPKSNQFIPTTILEPFISEQEKDNPIYQN 192
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG-CGVSQVSVMTRLS 190
I+ +V G++HT+A+ +++ G N+Y QL +G C V V R +
Sbjct: 193 IQYSNVCFGAQHTIAVSTTGTIFSWGSNQYGQLGLGHCNTKLVPVPVRFN 242
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 38/234 (16%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV 85
+ ++ +++ G H +A++ G +FSWG+ GQLG T P S V
Sbjct: 190 YQNIQYSNVCFGAQHTIAVSTTGTIFSWGSNQYGQLGLGHCNTKLVPVPVRFNRHSTRIV 249
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
V I++G +HS+ T +G +Y WG N GQ+G +DL V P + S +F K+
Sbjct: 250 VDIASGNFHSSLLTLEGDVYLWGSNQYGQLGQGDTIDLNV--PKKVKGSIEFK----KIN 303
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQL---SMGCGVSQVSVMTRLSVPEHVKNCPIVK 202
+A G+ HT+ L D ++ G NE+ QL SMG G +++ T + P + +
Sbjct: 304 RMALGNNHTILLTKDQDVYTFGNNEFYQLGHGSMG-GKNKIYFPTLIQKPRLL----VSD 358
Query: 203 LFAEHWNSARLSVPEHAKDSSI-----------------------VKLFAGHWN 233
+FA +SA + E + D SI +K+F G WN
Sbjct: 359 IFAAGDSSAYFVIDE-SPDPSILNNGSLNLQKSIANQNNIVKNAHLKIFVGTWN 411
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 33/195 (16%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN------- 71
+P +D V I G + A+T +G ++ WG S GQLG +N
Sbjct: 116 VPLPVDTLQKCNVIKIKAGNNISAAITDKGDLYIWGTSSFGQLGNGKMNPKSNQFIPTTI 175
Query: 72 MEP------REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLV 124
+EP ++ + + G H+ A + G +++WG N GQ+G+ LV
Sbjct: 176 LEPFISEQEKDNPIYQNIQYSNVCFGAQHTIAVSTTGTIFSWGSNQYGQLGLGHCNTKLV 235
Query: 125 VHDPHPMSWSEDFDSQNIK-VVDVACGSRHT--LALCDDNSLWGCGWNEYNQLSMGCGVS 181
P P+ F+ + + VVD+A G+ H+ L L D LWG N+Y QL G +
Sbjct: 236 ---PVPVR----FNRHSTRIVVDIASGNFHSSLLTLEGDVYLWGS--NQYGQLGQGDTID 286
Query: 182 QVSVMTRLSVPEHVK 196
L+VP+ VK
Sbjct: 287 -------LNVPKKVK 294
Score = 45.8 bits (107), Expect = 0.016, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+++ +P R + +V DIA G H LT EG V+ WG+ GQLG + D N+
Sbjct: 232 TKLVPVPVRFNRHSTRIVVDIASGNFHSSLLTLEGDVYLWGSNQYGQLGQGDT-IDLNV- 289
Query: 74 PREIR-ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
P++++ ++ + +++ G H+ T+D +Y +G N Q+G
Sbjct: 290 PKKVKGSIEFKKINRMALGNNHTILLTKDQDVYTFGNNEFYQLG 333
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 34/170 (20%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANME---PREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
+++SWG G G T N++ P L L + Q+S G HSAA + L
Sbjct: 3 VLYSWGKGKTGN-------TCHNIDKKYPSPPSVLISLNLDQLSIGPNHSAAIVNNECL- 54
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
WG V G+ + + W +VV V+CG HTL L + ++
Sbjct: 55 MWG-------EVMGRKHTTLFK---IVWKR-------RVVSVSCGFNHTLLLTSEYKIFS 97
Query: 166 CGWNEYNQLSMGCGVSQVSVMTRLSVP-EHVKNCPIVKLFAEHWNSARLS 214
G+N+ QL G+ V V + + +P + ++ C ++K+ A + SA ++
Sbjct: 98 MGFNQVGQL----GIENV-VDSAVPLPVDTLQKCNVIKIKAGNNISAAIT 142
>gi|312078990|ref|XP_003141980.1| hypothetical protein LOAG_06396 [Loa loa]
gi|307762853|gb|EFO22087.1| hypothetical protein LOAG_06396 [Loa loa]
Length = 320
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ G DH L LT G+V+S G GSRG+LG+ P+ + L+ L V++++
Sbjct: 188 IRQLSAGNDHILILTVNGMVYSMGTGSRGELGH--CNLKCEQHPKIVECLTPLTVIKVAC 245
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
G WHSAA T DG +Y WGWNN GQ+G ++ ++ P P+ E
Sbjct: 246 GRWHSAALTDDGDVYLWGWNNFGQLGDCCEIGEILDVPTPLDILE 290
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
+ Q+SAG H T +G +Y+ G + G++G L H + + V
Sbjct: 188 IRQLSAGNDHILILTVNGMVYSMGTGSRGELG-HCNLKCEQHPKIVECLTP------LTV 240
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLF 204
+ VACG H+ AL DD ++ GWN + QL C + ++ L VP + I+
Sbjct: 241 IKVACGRWHSAALTDDGDVYLWGWNNFGQLGDCCEIGEI-----LDVPTPLDILEIIVDI 295
Query: 205 AEHWNSARLSVPEH 218
A H N L +H
Sbjct: 296 AAHGNGTWLRRADH 309
>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 456
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREI 77
P + +T + G H A+ +EG ++ WG+ +LG G + ME PRE+
Sbjct: 101 PKLTEALEGKAITHVEFGASHSAAIDEEGKLYVWGSNEYSKLGL---GESSEMETLPREV 157
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD-PHPMSWSED 136
AL G+ +V +S G + +AA +DG +Y+WGW G G D P P +
Sbjct: 158 EALKGIKIVDVSCGDYFTAAVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTL 217
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D Q + + V CG HT+AL D +W G EY +L G
Sbjct: 218 VD-QGVPIATVECGEFHTVALTKDGEIWAWGNGEYGRLGNG 257
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 82/168 (48%), Gaps = 22/168 (13%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS-GTDA-N 71
S +P ++ F V IA G D ALT +G ++SWG S+ QLG D N
Sbjct: 259 SDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYN 318
Query: 72 ME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+E P + A +GL V QI+AG H+AA T+DG LY W G ++ +E PH
Sbjct: 319 IESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYMW----GAKIWIE---------PH 365
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
M+ + K+ VACG ++T+ L DD ++ G N L G
Sbjct: 366 EMTAVNEH-----KMTQVACGRQYTVGLTDDGKVFTFGKGSSNCLGHG 408
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ + CG H +ALT++G +++WGNG G+LG S T EP I S VV I+A
Sbjct: 224 IATVECGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEP--IEFFSKDNVVSIAA 281
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS-WSEDFDSQNIKVVDVAC 149
G S A T G LY+WG N+ Q+G+ G L + V++ + E F+ +K +A
Sbjct: 282 GRDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVK--QIAA 339
Query: 150 GSRHTLALCDDNSL--WGC----------GWNEYNQLSMGCG 179
G H A+ +D L WG NE+ + CG
Sbjct: 340 GYDHAAAVTEDGRLYMWGAKIWIEPHEMTAVNEHKMTQVACG 381
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWG-NGSRGQLGYPSSGTDANM 72
S++ +P ++ + + D++CG A+ ++G ++SWG GS +
Sbjct: 148 SEMETLPREVEALKGIKIVDVSCGDYFTAAVDEDGKMYSWGWGGSTMKGAGGLGHAGGKD 207
Query: 73 E--PREIRAL--SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
E PR + L G+ + + G +H+ A T+DG ++AWG G++G G+ D P
Sbjct: 208 EPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGEIWAWGNGEYGRLG-NGESD-TCEVP 265
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR 188
P+ E F N VV +A G + AL D L+ G N NQL +G G++ + V
Sbjct: 266 EPI---EFFSKDN--VVSIAAGRDFSFALTDKGELYSWGGNSQNQLGIGGGLA-MDVYNI 319
Query: 189 LSVPEHVK--NCPIVKLFAEHWNSA 211
S+P V+ N +VK A ++ A
Sbjct: 320 ESIPVLVEAFNGLLVKQIAAGYDHA 344
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 16/127 (12%)
Query: 50 VFSWGNGSRGQLGYPS---SGTDANME---PREIRALSGLGVVQISAGGWHSAARTQDGF 103
V++WGNG+ GQLG+ S SG + E P+ AL G + + G HSAA ++G
Sbjct: 71 VYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAIDEEGK 130
Query: 104 LYAWGWNNGGQVGV--EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDN 161
LY WG N ++G+ +++ + + + + IK+VDV+CG T A+ +D
Sbjct: 131 LYVWGSNEYSKLGLGESSEMETLPREVEAL--------KGIKIVDVSCGDYFTAAVDEDG 182
Query: 162 SLWGCGW 168
++ GW
Sbjct: 183 KMYSWGW 189
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++++ P M + +T +ACG + + LT +G VF++G GS LG+ ++
Sbjct: 358 AKIWIEPHEMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFGKGSSNCLGHGDRKN--QLQ 415
Query: 74 PREIRALSGLGVVQISAGGWHSAA 97
P +I+AL+G+ + +S G +H A
Sbjct: 416 PVKIQALAGVNITSVSCGDYHMGA 439
>gi|330842712|ref|XP_003293316.1| hypothetical protein DICPUDRAFT_95807 [Dictyostelium purpureum]
gi|325076362|gb|EGC30154.1| hypothetical protein DICPUDRAFT_95807 [Dictyostelium purpureum]
Length = 813
Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 7/148 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL-SGLGVVQIS 89
V DI CG DH + L +E VF+WG+ S G+LG + + +R L +G+ V +
Sbjct: 98 VVDIECGNDHTIVLDREKRVFTWGSASLGRLGLGKTSSQLKPANVNLRPLATGVFAVSVH 157
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AGG S +G L WG+N Q+G+E +D P F SQ++++ D +
Sbjct: 158 AGGASSGCVLSNGSLLTWGYNKYSQLGIETTVDQYTPQLVP------FFSQHVQISDFSI 211
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G RH A+ + L+ G N+ QL G
Sbjct: 212 GDRHMAAVDTNGELYTWGCNDEYQLGTG 239
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 33/151 (21%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
++D + G H A+ G +++WG QLG +S + +P I+ ++
Sbjct: 206 ISDFSIGDRHMAAVDTNGELYTWGCNDEYQLGTGTSFPE--RKPTSIKIKGFQQFKKVRC 263
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-----VV 145
GG +++A TQ+ LY WG ++ ++ S K VV
Sbjct: 264 GGDYTSAVTQNNQLYIWG-----------------------TFVREYSSNTPKHFMDNVV 300
Query: 146 DVACGS---RHTLALCDDNSLWGCGWNEYNQ 173
D C S +H +A + +W GWN Y Q
Sbjct: 301 DFDCSSDCGKHIIARTSNKEVWAFGWNRYGQ 331
Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 22/130 (16%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI---SA 90
+ CG D+ A+TQ ++ WG R Y S+ M+ VV S
Sbjct: 261 VRCGGDYTSAVTQNNQLYIWGTFVRE---YSSNTPKHFMD----------NVVDFDCSSD 307
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H ART + ++A+GWN GQ G E + D P+S S+ + V+ G
Sbjct: 308 CGKHIIARTSNKEVWAFGWNRYGQSGSEEDQHI---DTLPISKSKLITGYPAQ---VSTG 361
Query: 151 SRHTLALCDD 160
S H+ L D+
Sbjct: 362 SYHSALLYDN 371
>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
Length = 1024
Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG +PS+ P+ + L+G+ +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPST-----TAPQIVEHLAGIPLA 194
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QISAG HS A + G +Y+WG N GQ+G LD P S E D+Q KV
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLG----LDHTESKDSP-SLIEALDNQ--KVEF 247
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ACG HT L D L+ G ++ QL
Sbjct: 248 LACGGSHTALLTQDGLLFTFGAGKHGQL 275
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ + V +ACG H LTQ+G++F++G G GQLG+ S T + P +
Sbjct: 234 PSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNS--TQNELRPCLVAE 291
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G V QI+ G WH+ A D G ++++G GQ+G G D ++ P +S +ED
Sbjct: 292 LAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDL 350
Score = 70.1 bits (170), Expect = 7e-10, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG T++ P I A
Sbjct: 182 PQIVEHLAGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGL--DHTESKDSPSLIEA 239
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG H+A TQDG L+ +G GQ+G + + P +E +
Sbjct: 240 LDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQN----ELRPCLVAELAGN 295
Query: 140 QNIKVVDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMG 177
+V +ACG HTLA D ++ G + QL G
Sbjct: 296 ---RVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNG 331
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q K++ + CG H+LAL L+ G N + QL +G + T + EH+ P
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG---RKFPSTTAPQIVEHLAGIP 192
Query: 200 IVKLFAEHWNSARLSV 215
+ ++ A +S LS+
Sbjct: 193 LAQISAGEAHSMALSM 208
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 77/147 (52%), Gaps = 12/147 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T +A G H LA+T ++S+G GS G LG+ TD NM P I +L V I+
Sbjct: 89 ITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDE-TDLNM-PTSIESLEDKDVNIIAC 146
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG+HSAA T++G LY WG N+ GQ+G++ +S+ D V+ VACG
Sbjct: 147 GGYHSAAITKNGELYIWGSNSEGQLGLKND---------TISYPTMLDLGK-SVISVACG 196
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
HT + D L+ G E +L +G
Sbjct: 197 YYHTAVVTADGKLYTFGETEGGKLGLG 223
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 11/164 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+MP+ ++ D V IACG H A+T+ G ++ WG+ S GQLG + D P
Sbjct: 127 LNMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGLKN---DTISYPTM 183
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ G V+ ++ G +H+A T DG LY +G GG++G+ G + + H ++ +
Sbjct: 184 LDL--GKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGL-GDI-----EAHKVTKPKV 235
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ KVV VACG HT+AL ++ G + QL +G +
Sbjct: 236 VKGISGKVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKI 279
Score = 77.0 bits (188), Expect = 6e-12, Method: Composition-based stats.
Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 9/146 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
VTDIACG +H + +T+ G +F++GN GQLG S+ T +P ++AL + ++A
Sbjct: 37 VTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKT--RNKPTTVKALKPEKITHVAA 94
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +H+ A T LY++G + G +G + DL + P + ED D NI +ACG
Sbjct: 95 GRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNM--PTSIESLEDKDV-NI----IACG 147
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ A+ + L+ G N QL +
Sbjct: 148 GYHSAAITKNGELYIWGSNSEGQLGL 173
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 6 ASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
+ G L + + P+ +D L V +ACG+ H +T +G ++++G G+LG
Sbjct: 167 SEGQLGLKNDTISYPTMLD--LGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGD 224
Query: 66 SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
+P+ ++ +SG VV+++ GG H+ A T G +Y +G GQ+G+ K +
Sbjct: 225 IEAHKVTKPKVVKGISG-KVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSK----I 279
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D + E + IK +ACG HT + D L+ G + +L G
Sbjct: 280 MDSNIPKLVEALSKRKIK--HIACGESHTAVVSDKGELFTFGDGRHGKLGQG 329
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG +H +ALT G V+++G+G GQLG S D+N+ P+ + ALS + I+
Sbjct: 243 VVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNI-PKLVEALSKRKIKHIAC 301
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+A + G L+ +G G++G + + P + ++F V+ +ACG
Sbjct: 302 GESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKPVKVQRLKEF-----IVLHIACG 356
Query: 151 SRHTLALCD 159
HT+ C+
Sbjct: 357 GCHTIVACN 365
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 7 SGPLKMLSQVF--HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
+G L + S++ ++P ++ + IACG H ++ +G +F++G+G G+LG
Sbjct: 270 NGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQG 329
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHS 95
+P +++ L V+ I+ GG H+
Sbjct: 330 DESFSNLFKPVKVQRLKEFIVLHIACGGCHT 360
Score = 37.7 bits (86), Expect = 4.0, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
KV D+ACG HT+ + ++ L+ G NE+ QL +G
Sbjct: 36 KVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIG 70
Score = 37.7 bits (86), Expect = 4.1, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V I+ G H+ T++G L+ +G N GQ+G+ + + P + + K+
Sbjct: 37 VTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGS--NKTRNKPTTVK-----ALKPEKI 89
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
VA G HTLA+ D N L+ G L G
Sbjct: 90 THVAAGRFHTLAVTDSNKLYSFGQGSEGALGHG 122
>gi|39104479|dbj|BAC65474.3| mKIAA0032 protein [Mus musculus]
Length = 938
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 17 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-----P 71
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D P +
Sbjct: 72 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKL- 128
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L ++ G QL
Sbjct: 129 ----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 164
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 71 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 128
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G D V + +P E S
Sbjct: 129 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG----HDSVNDEVNPRRVLELMGS 184
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLAL + L +GCG
Sbjct: 185 E---VTQIACGRQHTLALVPSSGLIYAFGCG 212
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 134 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN--PRRVLELMGSEVTQIAC 191
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDP-------HPMSWSEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P H S D
Sbjct: 192 GRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKY 251
Query: 143 KVVD-VACGSRHTLALCD--DNSLWGCGWNEYNQ 173
+VV + G T LC +NS + NQ
Sbjct: 252 RVVKQIFSGGDQTFVLCSTYENSSPAVDFRTVNQ 285
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Query: 56 GSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
GS GQLG ++ D+ PR I+ L+ ++Q+S G WH A DG + WG N+ GQ+
Sbjct: 1 GSDGQLGLMTT-EDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 59
Query: 116 GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
G+ + P S + I + VA G H+ AL +++G G N QL
Sbjct: 60 GLGKEF------PSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 113
Query: 176 M 176
+
Sbjct: 114 L 114
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM--EPR 75
+ P ++ + D + ++CG H +ALT G V+SWG GS GQLG+ D + EP+
Sbjct: 38 NFPQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGH----GDLKIINEPQ 93
Query: 76 EIRALSG--LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I L V IS GG HSAA T+DG LY WG ++ GQ+G+ + + H+ P+
Sbjct: 94 KIAFFEQERLEVDYISCGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYE-AAHESLPVKC 152
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+V V+CG HT AL ++ G + QL +G
Sbjct: 153 PMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIG 196
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS-GTDANME-------PREIRALS 81
+ ++CG H ALT G V+ WG G GQLG S D E P ++A +
Sbjct: 162 TIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFN 221
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G VVQ++ G +HSAA T+ G +Y WG + G +GV D + P + + +D
Sbjct: 222 GEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQI--PKRLEYFDD----- 274
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I V+ V+CG HT+ + + G EY +L +G
Sbjct: 275 IPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLG 310
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + F V +ACG H A+T++G V+ WG G LG S +D + P+ +
Sbjct: 214 PHLLKAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQS-SDQQI-PKRLEY 271
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+ V+++S GGWH+ + G YA+G G++G+ PH +
Sbjct: 272 FDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRT--RPHLVK-----AL 324
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
+ V+ ACG HTL + D + + G ++ +L + + M L VP + P
Sbjct: 325 KGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGL-------ADMKALGVPTRLDLGP 377
Query: 200 I-VKLFA 205
I V+ F+
Sbjct: 378 IPVRQFS 384
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+++F D+ V ++CG H + + + G +++G G G+LG T + P +
Sbjct: 264 QIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGL--GDTKSRTRPHLV 321
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+AL G V+Q + GG H+ T DG Y G + G++G+ D +
Sbjct: 322 KALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGLA--------DMKALGVPTRL 373
Query: 138 DSQNIKVVDVACGSRHTLAL 157
D I V + G H++AL
Sbjct: 374 DLGPIPVRQFSAGGAHSVAL 393
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 15/178 (8%)
Query: 47 EGIVFSWGNGSRGQLG-----YPSSGTD---ANMEPREIRALSGLGVVQISAGGWHSAAR 98
E +V ++G GQLG P+ D A+ P++I L +V +S G H+ A
Sbjct: 5 ECVVTAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMAL 64
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T G +Y+WGW + GQ+G G L ++++P +++ F+ + ++V ++CG H+ A+
Sbjct: 65 TSSGAVYSWGWGSMGQLG-HGDLK-IINEPQKIAF---FEQERLEVDYISCGGCHSAAVT 119
Query: 159 DDNSLWGCGWNEYNQLSMG--CGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
D +L+ G + + QL + + S+ + +PE IVK+ ++A L+
Sbjct: 120 KDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALT 177
>gi|221127499|ref|XP_002163753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Hydra
magnipapillata]
Length = 350
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ I CG +H +ALT GIV++ G G RGQLG D+ ++ L L V I+A
Sbjct: 168 IKKICCGREHGIALTNNGIVYTIGGGWRGQLGLGV--VDSADILTKVDLLEPLKVKDIAA 225
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI-------K 143
GGWH + G LY WGWN GQ+GV K D + +S+ + S ++
Sbjct: 226 GGWHCLVISDSGDLYGWGWNESGQIGVI-KEDSDESEEEILSFPKLLFSPSLVDTPIEQT 284
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V+ GSRH+ A+ + L+ GWN Y QL G
Sbjct: 285 FISVSAGSRHSSAVSSNGLLFSWGWNGYGQLMHG 318
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-----------SGTD 69
+++D L V DIA G HCL ++ G ++ WG GQ+G S
Sbjct: 210 TKVDLLEPLKVKDIAAGGWHCLVISDSGDLYGWGWNESGQIGVIKEDSDESEEEILSFPK 269
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
P + + +SAG HS+A + +G L++WGWN GQ+
Sbjct: 270 LLFSPSLVDTPIEQTFISVSAGSRHSSAVSSNGLLFSWGWNGYGQL 315
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 14/153 (9%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
+ +I G H A T +G +Y G G G+L L V D + D + +KV
Sbjct: 168 IKKICCGREHGIALTNNGIVYTIGG------GWRGQLGLGVVDSADILTKVDL-LEPLKV 220
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLF 204
D+A G H L + D L+G GWNE Q+ + S S LS P+ + + +V
Sbjct: 221 KDIAAGGWHCLVISDSGDLYGWGWNESGQIGVIKEDSDESEEEILSFPKLLFSPSLVDTP 280
Query: 205 AEHWNSARLSVPEHAKDSSIVK----LFAGHWN 233
E +SV ++ SS V LF+ WN
Sbjct: 281 IEQ---TFISVSAGSRHSSAVSSNGLLFSWGWN 310
>gi|354503314|ref|XP_003513726.1| PREDICTED: RCC1 domain-containing protein 1-like, partial
[Cricetulus griseus]
Length = 327
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L V + G +H L L + G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 154 ELRVRQLELGAEHVLLLCEAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLRMA 210
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
+++AGGWHS ++ G +Y WGWN GQ+ + K
Sbjct: 211 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPIK 244
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG ++SWG G+LG+
Sbjct: 2833 TESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGH--GNRSPC 2890
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV I+AGG HSA T G LY WG G++G D + P +
Sbjct: 2891 DRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQL--KPKLV 2948
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+DVACGS TL L DD+ +W G +Y +L G
Sbjct: 2949 EA-----LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG 2991
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 2998 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 3055
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 3056 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA----- 3108
Query: 139 SQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 3109 LQGKKINRVACGSAHTLA 3126
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ + VV +A G H +ALT +G VFSWG G G+LG+ S
Sbjct: 1835 LGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRM 1894
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY+WG G++G H
Sbjct: 1895 NCD---KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLG---------H 1942
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +VV VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 1943 GDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGC 2002
Query: 179 GVSQ 182
+ Q
Sbjct: 2003 NIPQ 2006
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 1789 IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPI--PR 1846
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 1847 QISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 1902
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 1903 -EALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQL 1949
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + +V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 2956 VIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 3013
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 3014 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 3066
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 3067 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3095
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 1951 PKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLG--RGGSEGCNIPQNI 2008
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G D+ V P +
Sbjct: 2009 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG--HGTDVHVRKPQMVE----- 2061
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ + ++ G N++ Q G G + V+
Sbjct: 2062 GLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQ--QGNGTTTVN 2106
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++ +P+
Sbjct: 2003 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVRKPQM 2059
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T+ G ++AWG N+ GQ G V P + +
Sbjct: 2060 VEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQG--NGTTTVNRKP---TLVQG 2114
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 2115 LEGQ--KITRVACGSSHSVA 2132
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G ++SWG G G+LG+ + T + P+ ++
Sbjct: 1899 PRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTT--QLRPKLVKV 1956
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VVQ++ G + A T +G +++WG + G++G G + P + E
Sbjct: 1957 LLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 2011
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 2012 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 2052
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V DIA G H +T G +++WG G G+LG+ S + ++P+ + A
Sbjct: 2893 PRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDS--EDQLKPKLVEA 2950
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ ++ +G + T D +++WG + G++G G V PM
Sbjct: 2951 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKV----PMK----I 3002
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 3003 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3043
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 72/164 (43%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG P E AL+ L VQ+ G A T DG LYA
Sbjct: 2763 GTIYGWGHNHRGQLGGIEGAKVKVPTPTE--ALATLRPVQLIGGEQTLFAVTADGKLYAT 2820
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E I+ V V G +H LAL + L+ G
Sbjct: 2821 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWG 2875
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 2876 EAEDGKLGHG----NRSPCDRPRVIESLRGVEVVDIAAGGAHSA 2915
>gi|403335798|gb|EJY67083.1| hypothetical protein OXYTRI_12623 [Oxytricha trifallax]
Length = 1128
Score = 83.6 bits (205), Expect = 6e-14, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
H GP + ++F++P + ++++ ++CG H ++++G VFS+G S GQLG
Sbjct: 21 HGQEGPDR--KKIFNLPKSLS--FEVLIQQVSCGSAHTSFISKQGYVFSFGCNSDGQLGV 76
Query: 64 PSSGTDANMEPREIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
+ P I L L VQIS GG+H+A T G +Y WG N GQ G
Sbjct: 77 NDPAIKFSSAPLLISDLVSLQTNPVQISCGGFHTAVLTSVGDVYIWGRNLQGQCGRSINY 136
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + PH + DS N V CG +HT + L+ G N QL +G
Sbjct: 137 NQFMFAPHKLH----TDSANKTFRQVDCGDQHTAVVSSTGELYTFGDNSEGQLGIG 188
Score = 57.0 bits (136), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 51 FSWGNGSRGQLGYPSSGTDANMEPREIRALS-GLGVVQISAGGWHSAARTQDGFLYAWGW 109
FSWGN GQLG+ G D ++LS + + Q+S G H++ ++ G+++++G
Sbjct: 9 FSWGNDEMGQLGHGQEGPDRKKIFNLPKSLSFEVLIQQVSCGSAHTSFISKQGYVFSFGC 68
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD--DNSLWG-- 165
N+ GQ+GV P +S D S V ++CG HT L D +WG
Sbjct: 69 NSDGQLGVNDPAIKFSSAPLLIS---DLVSLQTNPVQISCGGFHTAVLTSVGDVYIWGRN 125
Query: 166 ----CGWN-EYNQL 174
CG + YNQ
Sbjct: 126 LQGQCGRSINYNQF 139
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 87/172 (50%), Gaps = 17/172 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ ++ + + IA G HCLAL+ + V+SWG G G+LG+ A P+
Sbjct: 3106 VPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGH--GNRLACETPKL 3163
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL G ++ I+ GG HSAA T G LY WG G++G D + P E
Sbjct: 3164 IEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQL----KPKLIEEL 3219
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVSQ 182
KV+DVACGS TL + DD+++W G +Y +L S GC V +
Sbjct: 3220 V---GYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPK 3268
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P +++ L V + CG +ALT+ G V++WG G +LG+ GT ++ P+++
Sbjct: 3266 VPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH---GTGEHVRRPKKV 3322
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G ++ I+ G H A + +G ++ WG N+ GQ+G + + P +S
Sbjct: 3323 AALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTT--NAIQRPRLVSA---- 3376
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
Q K+ +VACGS HTLA +N+ C
Sbjct: 3377 -LQGKKITNVACGSAHTLAWSTNNASSACA 3405
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
P + V+ +A G H +ALT +G VFSWG G G+LG+ G N++ P+
Sbjct: 2131 PRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH---GNRLNLDKPKM 2187
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL + I+ G HSAA T G LY WG G++G H +
Sbjct: 2188 IEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLG---------HGDNITQLKPK 2238
Query: 137 FDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCGV 180
+ ++V VACGSR TLAL D+ ++ G ++ +L S GC +
Sbjct: 2239 LIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNI 2290
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ + V D+ACG L +T + V+SWG+G G+LG G+D P++I
Sbjct: 3213 PKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLG--RGGSDGCKVPKKI 3270
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+GLGV+++ G S A T+ G +Y WG + ++G G + H P +
Sbjct: 3271 ESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLG-HGTGE---HVRRPKKVAA-- 3324
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
Q K++ +A GS H +A D+ ++ G N+ QL
Sbjct: 3325 -LQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQL 3360
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ L V I CG LALT+ G V++WG G +LG+ G+D ++ +P
Sbjct: 2289 NIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGH---GSDQHVRKPTV 2345
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L V+ ++ G H A T G +YAWG N+ GQ G +V P + ED
Sbjct: 2346 IESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTIVNRKPALVHGLED 2403
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ + VACGS H++A
Sbjct: 2404 -----VHINRVACGSSHSIA 2418
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + + + +ACG LALT EG VFSWG+G G+LG G++ P I
Sbjct: 2237 PKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLG--RGGSEGCNIPHNI 2294
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ L VVQI G S A T+ G ++ WG + ++G G D V P + +D
Sbjct: 2295 ERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLG-HGS-DQHVRKPTVIESLKDK 2352
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
KV+ VA G+ H LA+ D ++ G N++ Q G +
Sbjct: 2353 -----KVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTI 2390
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P + D L IA G ++ EG +++ G G+ G+LG G N+ PR I
Sbjct: 2078 LPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGL---GHSNNVPYPRPI 2134
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
LS + V + +GG H+ A T DG +++WG G++G +L+L D M E
Sbjct: 2135 PFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNL---DKPKM--IE 2189
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
S+ I+ D+ACGS H+ A+ L+ G EY +L G ++Q+
Sbjct: 2190 ALRSKKIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQL 2235
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ S + ++P+ I
Sbjct: 3161 PKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDS--EDQLKPKLIEE 3218
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ ++ +G + T D +++WG + G++G G V P +
Sbjct: 3219 LVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV--PKKIE----- 3271
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
+ V+ V CGS+ ++AL S++ G +Y++L G G
Sbjct: 3272 SLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTG 3313
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q P+ ++ D V +A G HCLA+T G V++WG+ GQ G + T N +P
Sbjct: 2338 QHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTIVNRKP 2395
Query: 75 REIRALSGLGVVQISAGGWHSAA 97
+ L + + +++ G HS A
Sbjct: 2396 ALVHGLEDVHINRVACGSSHSIA 2418
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 11/161 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + L + G A+T +G V++ G GTD+ + P +
Sbjct: 3054 IPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYA--TGYGAGGRLGIGGTDSVLVPTLLE 3111
Query: 79 ALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + +I+ +GG H A + D +Y+WG + G++G +L P + +
Sbjct: 3112 SIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRL--ACETPKLIEALQG 3169
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ ++D+ACG H+ A+ L+ G Y +L G
Sbjct: 3170 YE-----IIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHG 3205
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P ALS L VQ+ G A T DG +YA
Sbjct: 3031 GTIYGWGHNHRGQLG-GIEGAKVKI-PTPCEALSTLRPVQLVGGEQTLFAVTADGKVYAT 3088
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G ++V + E IK + V G +H LAL DN ++ G
Sbjct: 3089 GYGAGGRLGIGGTDSVLVP-----TLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWG 3143
Query: 168 WNEYNQLSMG 177
+ +L G
Sbjct: 3144 EGDDGKLGHG 3153
>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1711
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 82/159 (51%), Gaps = 9/159 (5%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G +H +ALT G+ +SWG RGQLG+ + T ++ P+ I +L + S HSA
Sbjct: 417 GCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVHV-PKLIESLKDKKLRYASVSYHHSA 475
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
T G LYA+G N+ GQ+G LD H P + F+ I + VACG HT+
Sbjct: 476 VITDSGELYAFGMNDCGQLG----LDHTQHQSTP-QLVKGFEGTEISM--VACGLYHTII 528
Query: 157 LCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
L+ CG N+Y QL +G Q+ V + +S+P +
Sbjct: 529 CTATGGLFACGKNDYGQLGLGHN-RQIKVASLVSLPNEM 566
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + F ++ +ACG H + T G +F+ G GQLG G + ++ + +
Sbjct: 505 PQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDYGQLGL---GHNRQIKVASLVS 561
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V +++G +HS T G +++G N+ GQ+G+ K VH P + S
Sbjct: 562 LPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNK----VHQNVPNVVAL---S 614
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
N ++V CG HT+ L + ++ G N QL
Sbjct: 615 ANTRMVRATCGCYHTVLLSEQGQVFVFGRNNKGQL 649
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG-LGVVQI 88
+V+ +A G+ H + +T G FS+G GQLG G + + ALS +V+
Sbjct: 566 MVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGI---GNKVHQNVPNVVALSANTRMVRA 622
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G +H+ ++ G ++ +G NN GQ+G G D ++ P P+ + +S+ + VDVA
Sbjct: 623 TCGCYHTVLLSEQGQVFVFGRNNKGQLGNRGSADALL--PVPLKVRPEKNSR--RCVDVA 678
Query: 149 CG 150
G
Sbjct: 679 AG 680
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 9/148 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +A G + LT +G+V + G GQ G + M R ++AL V I+A
Sbjct: 356 IRQVASGNETLAVLTNDGVVLTCGLNKSGQCGQ-GHFDERVMMLRPVQALRSQRVKFIAA 414
Query: 91 --GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H A T G Y+WG+N+ GQ+G E L VH P + E + ++ V+
Sbjct: 415 SNGCEHMIALTDSGLAYSWGYNDRGQLGHE-NLTTKVHVPKLI---ESLKDKKLRYASVS 470
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ + D L+ G N+ QL +
Sbjct: 471 --YHHSAVITDSGELYAFGMNDCGQLGL 496
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ L + ++CG H +ALT G V+SWG GS GQLG+ + +
Sbjct: 42 NFPKQLGGLLGEEIVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAF 101
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
GL V +S GG HSAA T DG LY WG + GQ+G+ + + H+ P+
Sbjct: 102 FEQEGLKVDYVSCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFE-AAHESFPVKCPLLE 160
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VV V+CG HT AL + ++ G + QL +G
Sbjct: 161 GVADESVVKVSCGGTHTAALTNLGRVYVWGRGDSGQLGIG 200
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 23 MDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS---GTDAN-----MEP 74
++ D V ++CG H ALT G V+ WG G GQLG S+ TD N P
Sbjct: 159 LEGVADESVVKVSCGGTHTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRP 218
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +G VVQ++ G +HSAA T+ G +Y WG + G +GV D
Sbjct: 219 HLVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVG-----QTSDQQTPKRV 273
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E FD +I + V+CG HT+ + + G EY +L +G
Sbjct: 274 EFFD--DIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLG 314
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P R++ F D+ ++CG H + + + G +++G G G+LG T + P +
Sbjct: 268 QTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGL--GDTKSRTRPHLV 325
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+AL G V+Q + GG H+ T DG Y G + G++G+ D P+S
Sbjct: 326 KALKGQTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGMT--------DMKPLSVPTRL 377
Query: 138 DSQNIKVVDVACGSRHTLAL 157
D I V V+ G H++AL
Sbjct: 378 DLGPIPVRQVSAGGAHSMAL 397
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ F V +ACG H A+T++G V+ WG G LG T P+ +
Sbjct: 218 PHLVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQ--TSDQQTPKRVEF 275
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+ +++S GGWH+ + G YA+G G++G+ PH + +
Sbjct: 276 FDDIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRT--RPHLV---KALKG 330
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q V+ ACG HTL + D + G ++ +L M + M LSVP + P
Sbjct: 331 QT--VIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGM-------TDMKPLSVPTRLDLGP 381
Query: 200 I 200
I
Sbjct: 382 I 382
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 47 EGIVFSWGNGSRGQLG-----YPSSGTD---ANMEPREIRALSGLGVVQISAGGWHSAAR 98
E V ++G GQLG P+ D A+ P+++ L G +V +S G H+ A
Sbjct: 9 ECAVVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMAL 68
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T G +Y+WGW + GQ+G G L ++ P +++ F+ + +KV V+CG H+ A+
Sbjct: 69 TASGAVYSWGWGSMGQLG-HGDLK-SINVPQKIAF---FEQEGLKVDYVSCGGCHSAAVT 123
Query: 159 DDNSLWGCGWNEYNQLSM 176
+D +L+ G + QL +
Sbjct: 124 NDGTLYMWGETHWGQLGL 141
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG---VV 86
V ACG H L +T +GI + G G+LG +M+P + LG V
Sbjct: 332 TVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGM------TDMKPLSVPTRLDLGPIPVR 385
Query: 87 QISAGGWHSAART 99
Q+SAGG HS A T
Sbjct: 386 QVSAGGAHSMALT 398
>gi|297816858|ref|XP_002876312.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297322150|gb|EFH52571.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 482
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 11 KMLSQVFHMPSRMD--HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
K S +M S + L V IACG H +T G + ++G G GQ G S T
Sbjct: 285 KATSSGVNMSSEVQCARVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGS--T 342
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
D + P + +L G+ + +++AG WH+ + DG +Y++G N GQ+G D P
Sbjct: 343 DDELSPTCVSSLLGIRIEEVAAGLWHTICASADGDVYSFGGNQFGQLGT--GCDQAETLP 400
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ E + +N+ V ++CG+RHT + D+ ++ GWN+Y QL +G
Sbjct: 401 KLL---EAPNLENVNVKIISCGARHTAVIADEGKVFCWGWNKYGQLGLG 446
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 90/215 (41%), Gaps = 36/215 (16%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--------------- 63
+P + + + +A G H LAL+ G V+ WG G GQLG
Sbjct: 218 LPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPC 277
Query: 64 ---------PSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQ 114
SSG + + E + R L G V +I+ GG HSA T G L +GW GQ
Sbjct: 278 IEPSSYGKATSSGVNMSSEVQCARVL-GSYVKKIACGGRHSAVITDTGALLTFGWGLYGQ 336
Query: 115 VGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
G +G D + P S I++ +VA G HT+ D ++ G N++ QL
Sbjct: 337 CG-QGSTD---DELSPTCVSSLL---GIRIEEVAAGLWHTICASADGDVYSFGGNQFGQL 389
Query: 175 SMGCGVSQVSVMTRLSVPEHVK--NCPIVKLFAEH 207
GC Q + +L +++ N I+ A H
Sbjct: 390 GTGC--DQAETLPKLLEAPNLENVNVKIISCGARH 422
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIR 78
P+ + L + + ++A G H + + +G V+S+G GQLG +G D A P+ +
Sbjct: 348 PTCVSSLLGIRIEEVAAGLWHTICASADGDVYSFGGNQFGQLG---TGCDQAETLPKLLE 404
Query: 79 A--LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
A L + V IS G H+A +G ++ WGWN GQ+G+ D++ + +D
Sbjct: 405 APNLENVNVKIISCGARHTAVIADEGKVFCWGWNKYGQLGLG---DVIDRNAPSEVRIKD 461
Query: 137 FDSQNIKVVDVACGSRHTLAL 157
+NI ACG HTL L
Sbjct: 462 CVPKNI-----ACGWWHTLLL 477
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
S D + P + G+ +V ++AGG H+ A + G ++ WG+ GQ+G+ ++ L
Sbjct: 210 SDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRL- 268
Query: 125 VHDPHPMSWSE--------------DFDSQNIKVV-----DVACGSRHTLALCDDNSLWG 165
V PHP+ E + Q +V+ +ACG RH+ + D +L
Sbjct: 269 VSSPHPIPCIEPSSYGKATSSGVNMSSEVQCARVLGSYVKKIACGGRHSAVITDTGALLT 328
Query: 166 CGWNEYNQLSMG 177
GW Y Q G
Sbjct: 329 FGWGLYGQCGQG 340
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 13/162 (8%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P+ ++ +++ +A G HCLAL+ +G VFSWG G G+LG+ D+ P+ I
Sbjct: 4453 PTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLI 4510
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
ALSG+GV+ I+ G HSA T G + WG G++G D + P + +
Sbjct: 4511 EALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL--QPKLVEALLGY 4568
Query: 138 DSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +D+ACGS TL + DD+++W G +Y +L G
Sbjct: 4569 -----RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4605
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + D V +ACG L LT+EG+VFSWG+G G+LG G++ P ++
Sbjct: 3423 PKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG--RGGSEGCSIPHQV 3480
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G+GV+QI G S A T+ G ++ WG + ++G D V P P+
Sbjct: 3481 ERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLG--HGTDQHVRKPTPIQ----- 3533
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ KV+ VA G+ H LA+ D ++ G N++ Q G
Sbjct: 3534 GLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG 3573
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L VT + CG +ALT+ G V++WG G +LG+ TD P+++
Sbjct: 4612 VPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGH--GNTDHVRRPKKVA 4669
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G ++ WG N+ GQ+G +G + + S
Sbjct: 4670 ALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLG-DGTVSAIQRPRLVQSL----- 4723
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 4724 -QGKHIVKVICGSAHTLAL 4741
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P ++ + DIACG H A+T G +++WG G G+LG+ + T ++P+
Sbjct: 3367 TLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCT--QLKPK 3424
Query: 76 EIRALSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+ AL+ VVQ++ G + T++G +++WG + G++G G + PH +
Sbjct: 3425 LVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSI--PHQV-- 3480
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E + + V+ + CG++ +LAL +W G +Y +L G
Sbjct: 3481 -ERLN--GVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHG 3521
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P +++ + V I CG LALT+ G V++WG G +LG+ GTD ++ +P I
Sbjct: 3476 IPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGH---GTDQHVRKPTPI 3532
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ ++ G H A T G +YAWG N+ GQ +G + +V+ + D
Sbjct: 3533 QGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQ---QGSGNTIVNKKPSLVLGLD- 3588
Query: 138 DSQNIKVVDVACGSRHTLA 156
I V VACGS H++A
Sbjct: 3589 ---GIFVNRVACGSSHSVA 3604
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 36 CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHS 95
C H LALT G VFSWGNG G+LG+ T + P I AL+ V + G +S
Sbjct: 637 CEGRHVLALTATGDVFSWGNGEGGRLGH--GDTSSKDIPTRIVALAERQVTGVFCGSSYS 694
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTL 155
AA T G LY WG G++G D H + + Q + V + CG H+L
Sbjct: 695 AAITAAGELYTWGRGTYGRLGHGNS-----EDKHLPTIVQVLKQQRVIHVALGCGDAHSL 749
Query: 156 ALCDDNSLWGCGWNEYNQLSMG-CGVSQVSVMTRL 189
+ D ++ G ++ +L G C S V V L
Sbjct: 750 CVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIEL 784
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 33/177 (18%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
P ++ VV +A G H +ALT +G VFSWG G G+LG+ G +E P+
Sbjct: 3317 PKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH---GNRLTLEKPKL 3373
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-------VEGKLDLVVHDPH 129
I L + I+ G HSAA T G LY WG G++G ++ KL + D
Sbjct: 3374 IETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALADH- 3432
Query: 130 PMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCGV 180
+VV VACGSR TL L ++ ++ G ++ +L S GC +
Sbjct: 3433 -------------RVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSI 3476
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P+ L IA G ++Q+G +++ G G+ G+LG G + N+ P+++
Sbjct: 3264 LPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGL---GHNNNVPTPKQV 3320
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
LS V V + +GG H+ A T DG +++WG G++G +L L P + E
Sbjct: 3321 PILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTL--EKPKLI---E 3375
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+ ++ +H
Sbjct: 3376 TLRTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALADH 3432
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ + V DIACG H +T +G V +WG G G+LG+ S + ++P+
Sbjct: 4504 YDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDS--EDQLQPKL 4561
Query: 77 IRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ AL G + I+ +G + T D +++WG + G++G G V PM
Sbjct: 4562 VEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV----PMKIE 4617
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V V CGS+ ++AL S++ G +Y++L G
Sbjct: 4618 ---SLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4657
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 10/167 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIA--CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
S+ H+P+ + V +A CG H L +T GIV++WG+G G+LG + +
Sbjct: 719 SEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSV 778
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
E+ S G V++ +G S A +DG +Y+WG +GG++G H P
Sbjct: 779 PVAIELPQCSD-GAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHS----EHTASPK 833
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
+ + + +NI VD+A G H LAL L+G G N++ QL C
Sbjct: 834 AI-QALEGKNI--VDLAVGLAHCLALTASGELYGWGRNDFQQLCPPC 877
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+R+ + VT + CG + A+T G +++WG G+ G+LG+ +S D ++ P ++
Sbjct: 672 IPTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNS-EDKHL-PTIVQ 729
Query: 79 ALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVG 116
L V+ ++ G HS T G +YAWG + G++G
Sbjct: 730 VLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLG 769
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+F WG+ RGQLG G+ M P ALS L +QI+ G A T DG LYA G+
Sbjct: 4379 IFGWGHNHRGQLG-GLDGSRIKM-PTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGY 4436
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GG++G+ G + + E IK V V G +H LAL D ++ G
Sbjct: 4437 GAGGRLGIGGTDSVTTP-----TLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEG 4491
Query: 170 EYNQLSMG 177
E +L G
Sbjct: 4492 EDGKLGHG 4499
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 11/163 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
MP+ + L IA G A+T +G +++ G GTD+ P
Sbjct: 4398 IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYA--TGYGAGGRLGIGGTDSVTTPTL 4455
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +L + + V +++GG H A + DG +++WG G++G G D + S
Sbjct: 4456 VESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG-HGNRDSYDRPKLIEALS 4514
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I V+D+ACGS H+ + + G Y +L G
Sbjct: 4515 ------GIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHG 4551
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 25/127 (19%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ D+A G HCLALT G ++ WG QL P D + + L + ++A
Sbjct: 843 IVDLAVGLAHCLALTASGELYGWGRNDFQQLCPPCVTRDPIVLLPILTTPPTLRIAGMAA 902
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD---- 146
GG S W + +G+ K+ VV D +++D
Sbjct: 903 GGAQSIV-----------WCHSSTLGIPVKIPFVV----------DLSEHTFRLLDQLLC 941
Query: 147 VACGSRH 153
+ CGS++
Sbjct: 942 MVCGSQN 948
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V WG + QLG G+ + P LS L + I+ G +QDG LYA G
Sbjct: 3243 VLVWGLNDKEQLG-GLKGSKVKL-PTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGE 3300
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
G++G+ ++ P+ +K V V G +H +AL D ++ G
Sbjct: 3301 GTNGRLGLGHNNNVPTPKQVPI-----LSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3355
Query: 170 EYNQLSMG 177
E +L G
Sbjct: 3356 EDGKLGHG 3363
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 83.6 bits (205), Expect = 7e-14, Method: Composition-based stats.
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 16/181 (8%)
Query: 8 GPLKMLSQVFH-MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS 66
G L + ++ FH P + +D+ + + CG H A+T +G V+SWG G GQLG+
Sbjct: 242 GQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGH--G 299
Query: 67 GTDANMEPREIRALSGLG--VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK---L 121
+ + P++I+ L + Q++ G + R+ G LYA+G GQ+G + L
Sbjct: 300 NVKSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHL 359
Query: 122 DLVVHDPHPMSWS-----EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
D D H +S + +++ IK +VACG HT+ + D+N ++ GW L +
Sbjct: 360 DFGGRDNH-FKYSIPIVVKSLETKKIK--NVACGHLHTIVVTDENEVYQWGWGSSGALGL 416
Query: 177 G 177
G
Sbjct: 417 G 417
Score = 66.6 bits (161), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 7/144 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V D++ G+ A+T+ G +++WG +GQLG + + P+ ++ L + +V +
Sbjct: 214 VVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHST--PQLVKTLIDVNIVSVVC 271
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H A T G +Y+WG GQ+G G + +H P + + F N ++ VACG
Sbjct: 272 GRQHICAITDQGEVYSWGLGVFGQLG-HGNVKSYLH-PKKI---QQFVELNERIAQVACG 326
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
S T+ L+ G EY QL
Sbjct: 327 SNFTMVRSVQGLLYAFGHGEYGQL 350
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V S G GQLG+ S +EP I L G ++Q +G HS A ++ G +Y+WG
Sbjct: 3 VLSVGQSKNGQLGHDS--IKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGR 60
Query: 110 NNGGQVGV---EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
+ GQ+G+ G D V+ P Q+ +++ VACG+ H+LAL D ++
Sbjct: 61 SKEGQLGIGQGYGGSDKVMFVAKPTLIKS---LQHERIIKVACGNFHSLALTDMGKVY-- 115
Query: 167 GWNEYNQL 174
W + ++L
Sbjct: 116 EWGQLHRL 123
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 20 PSRMDHFLDL--VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS-------GTDA 70
P ++ F++L + +ACG + + + +G+++++G+G GQLG G D
Sbjct: 307 PKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDN 366
Query: 71 NME---PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK-LDLVVH 126
+ + P +++L + ++ G H+ T + +Y WGW + G +G+ K LV
Sbjct: 367 HFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQ 426
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLAL-CDD 160
+S E + + G +HT+ + C D
Sbjct: 427 LITSLSGEE--------IASITAGEKHTIVVRCSD 453
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS--SGTDANM---EP 74
P+ ++ L + G H LA+++ G V+SWG GQLG G+D M +P
Sbjct: 25 PTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKP 84
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
I++L +++++ G +HS A T G +Y WG
Sbjct: 85 TLIKSLQHERIIKVACGNFHSLALTDMGKVYEWG 118
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV +S G SAA T+ G LY WG+N GQ+G+ + H P D + +
Sbjct: 214 VVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRW---FHST-PQLVKTLID---VNI 266
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V V CG +H A+ D ++ G + QL G
Sbjct: 267 VSVVCGRQHICAITDQGEVYSWGLGVFGQLGHG 299
>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
Length = 606
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 1 MCDHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQ 60
+CDH G LK V + P+R+D D V+ D+ CG ++ + VF+WG+GS+GQ
Sbjct: 239 LCDHGRLG-LKSGKDVPY-PTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQ 296
Query: 61 LGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
LG+ + PR + AL + +VQ++ G H AA + DG +Y WG GQ+G G
Sbjct: 297 LGHVEKSDE--WLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLG-HGD 353
Query: 121 LDLVVHDPHPMSWSEDFDSQNIKVVDV------ACGSRHTLALCDDNSLWGCGWNEYNQL 174
L+ P + ++ +V DV ACG+ TL L D L G +E+ L
Sbjct: 354 LNSC---STPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMSEFGAL 410
Query: 175 SMG 177
+G
Sbjct: 411 GLG 413
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ D++ G DH A+ G +F+WG G+LG SG D P + L +V ++
Sbjct: 215 IIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGL-KSGKDVPY-PTRVDFLKDEVIVDVTC 272
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G + SA + D ++ WG + GQ+G K D + P S + +I +V VA G
Sbjct: 273 GMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWL----PRSVAA---LHHIPIVQVALG 325
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
H AL D ++ G E+ QL G
Sbjct: 326 YEHMAALSLDGDVYTWGEGEHGQLGHG 352
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 13/122 (10%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG--VVQISAGGWHSAARTQDGFLYAW 107
+F+WG QLG + A P+ + L+ LG ++ +S G H AA G L+ W
Sbjct: 180 LFAWGCSHNYQLG--TGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTW 237
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WG 165
G + G++G++ D+ P+P DF + +VDV CG + + D + WG
Sbjct: 238 GLCDHGRLGLKSGKDV----PYPTRV--DFLKDEV-IVDVTCGMYSSACISHDMKVFTWG 290
Query: 166 CG 167
G
Sbjct: 291 SG 292
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 18/130 (13%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN----MEPREIRALSGLGVVQIS 89
++ G +HC A+T +G V++WG G G +G P+ +N +P ++ S
Sbjct: 437 LSAGDEHCAAVTSKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKPYKLELPLDKRACATS 496
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GG ++ ++DG + G ++ + PM + E + +K V C
Sbjct: 497 CGGNYTVILSKDGCVLVLGDDST--------------EIRPMLYDESNPASVMKASSVLC 542
Query: 150 GSRHTLALCD 159
G H+ A+ +
Sbjct: 543 GRYHSGAILN 552
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 49/131 (37%), Gaps = 9/131 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG L LT G + S+G G LG A R + V +SAG
Sbjct: 383 LACGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDE 442
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLV----VHDPHPMSWSEDFDSQNIKVVDVAC 149
H AA T G +Y WG G VG + P+ + D + +C
Sbjct: 443 HCAAVTSKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKPYKLELPLD-----KRACATSC 497
Query: 150 GSRHTLALCDD 160
G +T+ L D
Sbjct: 498 GGNYTVILSKD 508
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 101/231 (43%), Gaps = 27/231 (11%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
L +G +K VF +P + V +ACG H L T EG +F++G GQ G
Sbjct: 94 RLGTGDVK---DVF-IPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGL 149
Query: 64 PSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
S +EP+ + AL G VV ++ G HS T +G +Y WGW G +G D
Sbjct: 150 GS--IQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIG-----DG 202
Query: 124 VVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
D H + ++ + +KV V CG RH++A+ + +++ GW Y QL G
Sbjct: 203 ESQDRHLPTLAKGLE--GVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDHY 260
Query: 184 SVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHWNS 234
VP+ V+ V A W A DS +LFA WN
Sbjct: 261 -------VPKRVEAVQQVATVAGGWRHTM------AADSQ-GRLFASGWNK 297
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG +H + +T EG V+ WG G G +G S D ++ P + L G+ V Q++
Sbjct: 169 VVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGES-QDRHL-PTLAKGLEGVKVAQVNC 226
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A + G +Y WGW Q+ + D V P + + +V VA G
Sbjct: 227 GWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDHYV--PKRVEAVQ-------QVATVAGG 277
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
RHT+A L+ GWN++ Q CGV + R+ E + +V++
Sbjct: 278 WRHTMAADSQGRLFASGWNKFGQ----CGVGHNEDVVRVQQVEALAGERVVQV 326
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 31 VTDIACGFDHCLAL--TQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
V +ACG H LAL T G +V SWG G GQLG+ + + EP+ + +L G
Sbjct: 9 VIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDA--EDRQEPQAVFSLLHRGATS 66
Query: 88 ISAGGWHS-AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
+ G +S A D +Y+WGW + G++G D+ + P P +V
Sbjct: 67 VHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGR-------RVAS 119
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
VACG HTL + L+ G N+ Q +G
Sbjct: 120 VACGDTHTLVATAEGQLFAFGRNQNGQCGLG 150
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
SQ H+P+ + V + CG+ H +A+ + G +++WG G+ QL +
Sbjct: 204 SQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQL--MQGDRKDHYV 261
Query: 74 PREIRALSGLGVVQISAGGW-HSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPM 131
P+ + A+ + V AGGW H+ A G L+A GWN GQ GV D+V V +
Sbjct: 262 PKRVEAVQQVATV---AGGWRHTMAADSQGRLFASGWNKFGQCGVGHNEDVVRVQQVEAL 318
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +VV V G +HT+A+ + G N QL
Sbjct: 319 A--------GERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQL 353
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P + L T + CG ++ +A+ + V+SWG G G+LG + P +
Sbjct: 53 PQAVFSLLHRGATSVHCGAEYSMAVAGGDKQVYSWGWGDFGRLG--TGDVKDVFIPCPLP 110
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL+G V ++ G H+ T +G L+A+G N GQ G+ D + +P ++
Sbjct: 111 ALAGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCL--EPQLVT-----A 163
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VV VACG+ H++ + + ++ GW Y + G
Sbjct: 164 LQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDG 202
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P R++ V +A G+ H +A +G +F+ G GQ G + + + +++
Sbjct: 260 YVPKRVEAVQQ--VATVAGGWRHTMAADSQGRLFASGWNKFGQCGVGHN--EDVVRVQQV 315
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD 122
AL+G VVQ+ +G H+ A T G ++WG N GQ+G G D
Sbjct: 316 EALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQD 360
>gi|321259754|ref|XP_003194597.1| poly(a)+ RNA transport protein [Cryptococcus gattii WM276]
gi|317461069|gb|ADV22810.1| Poly(a)+ RNA transport protein, putative [Cryptococcus gattii
WM276]
Length = 590
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA--NMEPR 75
+ P + + +T ++CG DH LALT G V+ WG G QLG +EP
Sbjct: 254 YTPISLPALSKVQITQVSCGADHVLALTTTGHVYVWGKGEENQLGRRIISRRRINGLEPE 313
Query: 76 EIRALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ GL +V ++AG +HS A G +Y WG N Q GV D+++ P +
Sbjct: 314 RL----GLRNIVHVAAGIYHSFAVDNKGVVYGWGLNTFHQTGVAEHQDMIIA-PTVVDAL 368
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
KV+ V+ G H+L L D+ +WGCG + N+L +
Sbjct: 369 HPDRHNGSKVIKVSGGEHHSLFLFDNGEVWGCGRCDANELGL 410
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 66/158 (41%), Gaps = 20/158 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGY-----PSSGTDANMEPRE--------IRAL 80
+ CG H LA+ + G V SWG LG P M P E + L
Sbjct: 143 VYCGGMHTLAIDEAGRVRSWGINDNAALGRITTDVPDPKDPGQMIPNEDLESYPFVVETL 202
Query: 81 S--GLGVVQISAGGWHSAARTQDGFLYAWG--WNNGGQVGVEGKLDLVVHDPHPMSWSED 136
G VQ++AG S A ++ G L AWG +N G +G +G P+S
Sbjct: 203 EQEGFRAVQVAAGDSISVAISEKGELRAWGSFRSNEGILGFDGVPGHPKFQYTPISLPA- 261
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+++ V+CG+ H LAL ++ G E NQL
Sbjct: 262 --LSKVQITQVSCGADHVLALTTTGHVYVWGKGEENQL 297
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGN--GSRGQLGYPSSGTDANME--PREIRALSGLGVVQIS 89
+A G +A++++G + +WG+ + G LG+ + P + ALS + + Q+S
Sbjct: 212 VAAGDSISVAISEKGELRAWGSFRSNEGILGFDGVPGHPKFQYTPISLPALSKVQITQVS 271
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H A T G +Y WG Q+G ++ P E +NI V VA
Sbjct: 272 CGADHVLALTTTGHVYVWGKGEENQLGRRIISRRRINGLEP----ERLGLRNI--VHVAA 325
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQ 173
G H+ A+ + ++G G N ++Q
Sbjct: 326 GIYHSFAVDNKGVVYGWGLNTFHQ 349
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA--LSGL 83
+D V DI+ G H LA+++ G +++WG G+ QLG G++ E P +R+ L
Sbjct: 509 VDNPVVDISAGMRHNLAVSKSGHLYAWGYGNLAQLGL---GSEEVAEVPSLVRSKLLRPY 565
Query: 84 GVVQISAGGWHS---AARTQDG 102
V +SAGG H AA+ DG
Sbjct: 566 RSVAVSAGGQHCVALAAKKPDG 587
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 27/159 (16%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEP----------------REIRALSGLGVVQI 88
T +F WG G +GQ G D P R+ + SG G+ +
Sbjct: 85 TPHNALFVWGTGDQGQFGLGPDNLDEIGRPKLHSWFEEQIEEGNLSRDGKPGSG-GLEYV 143
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS--------- 139
GG H+ A + G + +WG N+ +G DP M +ED +S
Sbjct: 144 YCGGMHTLAIDEAGRVRSWGINDNAALGRITTDVPDPKDPGQMIPNEDLESYPFVVETLE 203
Query: 140 -QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + V VA G ++A+ + L G N+ +G
Sbjct: 204 QEGFRAVQVAAGDSISVAISEKGELRAWGSFRSNEGILG 242
>gi|390341567|ref|XP_003725482.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Strongylocentrotus purpuratus]
Length = 238
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS--------SGTDANMEPREIRALSG 82
+ + CG H LAL+ +G V+SWG+ + GQLG S T + +PR I+ LS
Sbjct: 77 IVSVCCGRHHFLALSADGRVYSWGSNNVGQLGIRKKKQRYDNQSQTTQDFKPRLIKELSK 136
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ-N 141
V+QI+ G HS A T DG L++WG N GQ+GVE K L H + + +
Sbjct: 137 FDVIQIACGDDHSLALTLDGRLFSWGCNRHGQLGVETK-GLAKRAKHHVEKPIEIEGLWG 195
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + +A G H++AL S++ G N + QL +
Sbjct: 196 IPLQHIAAGGAHSVALSTTGSIFVWGKNTHGQLGL 230
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-----P 74
P + V IACG DH LALT +G +FSWG GQLG + G + P
Sbjct: 128 PRLIKELSKFDVIQIACGDDHSLALTLDGRLFSWGCNRHGQLGVETKGLAKRAKHHVEKP 187
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
EI L G+ + I+AGG HS A + G ++ WG N GQ+G++
Sbjct: 188 IEIEGLWGIPLQHIAAGGAHSVALSTTGSIFVWGKNTHGQLGLQ 231
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G+ +V + G H A + DG +Y+WG NN GQ+G+ K +D + ++DF +
Sbjct: 74 GVDIVSVCCGRHHFLALSADGRVYSWGSNNVGQLGIRKKKQR--YDNQSQT-TQDFKPRL 130
Query: 142 IK------VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
IK V+ +ACG H+LAL D L+ G N + QL +
Sbjct: 131 IKELSKFDVIQIACGDDHSLALTLDGRLFSWGCNRHGQLGV 171
>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
gi|194706180|gb|ACF87174.1| unknown [Zea mays]
Length = 391
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 9/150 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P R++ DL + DIA G H ALT +G V++WG G G+LG+ + M
Sbjct: 237 TQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRLGF-GDDKSSRMV 295
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD------LVVHD 127
P ++ L+G +VQ+S GG HS A T+DG ++++G + G++G KL + +
Sbjct: 296 PLKVELLAGEDIVQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKLTTGQPMGVDIDL 355
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
P P + S K VACG RHTLA+
Sbjct: 356 PPPKTRSSRDGQWQAKY--VACGGRHTLAI 383
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 98/233 (42%), Gaps = 52/233 (22%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VT + G + LA+ ++G +F+WG RG LG+P T P + AL+GL +VQ +
Sbjct: 42 AVTAVVAGSRNSLAICEDGRLFTWGWNQRGTLGHPPK-TKTESSPGPVHALAGLKIVQAA 100
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD--------------------------- 122
GGWH A +G YAWG N GQ G E +
Sbjct: 101 IGGWHCLAVDDNGHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVA 160
Query: 123 -------LVVHDPHPMSWSEDFDSQNIKVVD-------------VACGSRHTLALCDDNS 162
++ + H +W + + +IK + +A G+ H LAL +D
Sbjct: 161 AGGTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGI 220
Query: 163 LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSV 215
LW G NEY QL G S R+ E + + +V + A W+S L++
Sbjct: 221 LWAWGNNEYGQLGTG-DTQPRSHPIRV---EGLSDLSLVDIAAGGWHSTALTI 269
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 88/171 (51%), Gaps = 16/171 (9%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G +K +S P R+ + V IA G H LALT++GI+++WGN GQLG +
Sbjct: 185 GDIKQIS----TPVRVQGLEKVRV--IAVGAFHNLALTEDGILWAWGNNEYGQLG--TGD 236
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVH 126
T P + LS L +V I+AGGWHS A T G +YAWG G++G + K +V
Sbjct: 237 TQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRLGFGDDKSSRMVP 296
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ ED +V V+CG H++AL D ++ G ++ +L G
Sbjct: 297 LKVELLAGED-------IVQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYG 340
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V +WG+G GQLG G + + AL V + AG +S A +DG L+ WGW
Sbjct: 10 VLAWGSGEDGQLGM--GGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWGW 67
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N G +G K P P+ +K+V A G H LA+ D+ + G N
Sbjct: 68 NQRGTLGHPPKTK-TESSPGPV-----HALAGLKIVQAAIGGWHCLAVDDNGHAYAWGGN 121
Query: 170 EYNQ 173
EY Q
Sbjct: 122 EYGQ 125
>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 1401
Score = 83.2 bits (204), Expect = 8e-14, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQIS 89
V IA G H LAL +G V++WGN GQLG GT N P ++ L+ VV I+
Sbjct: 219 VVAIAAGSSHSLALKSDGTVWAWGNNGYGQLG---DGTTTNRTTPVRVQGLTD--VVAIA 273
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVA 148
AG HS A DG ++ WGWN GQ+G D + QN+ VV +A
Sbjct: 274 AGNEHSLALKSDGTVWTWGWNYSGQLG----------DGTTTNRYTPVQVQNLTGVVAIA 323
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G H+LAL D ++W G N++ +L G
Sbjct: 324 AGGGHSLALKSDGTVWAWGNNDWGELGDG 352
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 53/140 (37%), Positives = 72/140 (51%), Gaps = 17/140 (12%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQISAGGWHSAAR 98
H LAL +G V++WG GQLG GT N P +++ L+G VV I+AG HS A
Sbjct: 178 HSLALKSDGTVWAWGYNGYGQLG---DGTTMNRYTPVQVQNLTG--VVAIAAGSSHSLAL 232
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSRHTLAL 157
DG ++AWG N GQ+G D + + Q + VV +A G+ H+LAL
Sbjct: 233 KSDGTVWAWGNNGYGQLG----------DGTTTNRTTPVRVQGLTDVVAIAAGNEHSLAL 282
Query: 158 CDDNSLWGCGWNEYNQLSMG 177
D ++W GWN QL G
Sbjct: 283 KSDGTVWTWGWNYSGQLGDG 302
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 61/169 (36%), Positives = 87/169 (51%), Gaps = 24/169 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQIS 89
V + G + LAL +G V++WG+ GQLG GT N P +++ L+G VV I+
Sbjct: 69 VVAVEAGSFYSLALKSDGTVWAWGDNYYGQLG---DGTTTNRYTPVQVQNLTG--VVAIA 123
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVA 148
AGG HS A DG ++AWG+N GQ+G D + + +N+ VV VA
Sbjct: 124 AGGGHSLALKSDGTVWAWGYNGYGQLG----------DGTITNRTTPVQVKNLTGVVAVA 173
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
G H+LAL D ++W G+N Y QL G + M R + P V+N
Sbjct: 174 AGGGHSLALKSDGTVWAWGYNGYGQLGDG------TTMNRYT-PVQVQN 215
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/165 (32%), Positives = 75/165 (45%), Gaps = 37/165 (22%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G LA+ +G V++WG GT P ++ L+G VV + AG +
Sbjct: 37 IAAGGARSLAIKSDGTVWAWG------------GT-----PVPVQNLTG--VVAVEAGSF 77
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSR 152
+S A DG ++AWG N GQ+G D + QN+ VV +A G
Sbjct: 78 YSLALKSDGTVWAWGDNYYGQLG----------DGTTTNRYTPVQVQNLTGVVAIAAGGG 127
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
H+LAL D ++W G+N Y QL G +T + P VKN
Sbjct: 128 HSLALKSDGTVWAWGYNGYGQLGDG-------TITNRTTPVQVKN 165
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 83.2 bits (204), Expect = 8e-14, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 24/186 (12%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++PS++ +V I+CGF + +AL +G V+ WG+ + GQLG + TD N
Sbjct: 316 YIPSQVQGLSGIV--SISCGFYYSMALKNDGTVWVWGDNTSGQLG-DGTTTDRNTAV--- 369
Query: 78 RALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+SGL GV+ I+ G HS A DG ++ WG+N GQ+G K+ + P+S +
Sbjct: 370 -PVSGLDGVIAIACGVNHSMALRNDGTVWTWGFNAFGQLGDGTKVS--KNTAVPISGLDG 426
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
++ + CG+ H++AL DD ++W G N+Y QL G +S + P V
Sbjct: 427 -------IIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISN-------TTPSQVS 472
Query: 197 NCPIVK 202
N +K
Sbjct: 473 NLSGIK 478
Score = 76.6 bits (187), Expect = 8e-12, Method: Composition-based stats.
Identities = 63/214 (29%), Positives = 89/214 (41%), Gaps = 52/214 (24%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ I+ G HCLAL +G V++WG+ GQLG T P ++ +SG + ISA
Sbjct: 527 IKAISIGSSHCLALKNDGTVWAWGDNRYGQLG--DGTTTIKSLPVQVSGISG--ITAISA 582
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS------------------ 132
GG HS A DG ++AWG NN GQ+G K D + P +S
Sbjct: 583 GGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDR--NTPVQVSELSGITVISNCIYRSFAL 640
Query: 133 ------WSEDFDSQNIK---------------VVDVACGSRHTLALCDDNSLWGCGWNEY 171
W DS N+ ++ + CG+ H LAL +D ++W G N +
Sbjct: 641 KNDGTVWVWGSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNF 700
Query: 172 NQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
Q G T ++P V VK A
Sbjct: 701 GQFGDG-------TTTTTNIPVQVSGLSGVKAIA 727
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 45/193 (23%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V+ I+ G + +AL +G V++WG GQLG ++ T + P +++ LSG ++ IS+
Sbjct: 227 VSSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTAT--RLSPVQVQNLSG--IIAISS 282
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVG------------VEGKLDLVV------------H 126
G HS A DG ++AWG N GQ+G V+G +V +
Sbjct: 283 GNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGIVSISCGFYYSMALKN 342
Query: 127 DPHPMSWSEDFDSQ---------NIK--------VVDVACGSRHTLALCDDNSLWGCGWN 169
D W ++ Q N V+ +ACG H++AL +D ++W G+N
Sbjct: 343 DGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDGVIAIACGVNHSMALRNDGTVWTWGFN 402
Query: 170 EYNQLSMGCGVSQ 182
+ QL G VS+
Sbjct: 403 AFGQLGDGTKVSK 415
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVVQIS 89
+ I CG H +AL +G V++WG+ GQLG +GT +N P ++ LSG + I
Sbjct: 427 IIAITCGTSHSMALKDDGTVWAWGDNQYGQLG---NGTFISNTTPSQVSNLSG--IKSIF 481
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G S A DG ++AWG N G++G +G V++ +E + +IK + +
Sbjct: 482 CGYSTSFALKPDGTVWAWGNNEYGELG-KGFTTRVIYP------TETLNIGDIKAISI-- 532
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H LAL +D ++W G N Y QL G
Sbjct: 533 GSSHCLALKNDGTVWAWGDNRYGQLGDG 560
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ G H LAL +G V++ G GQLG ++ D N P + L+ V ISA
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNT-IDIN-SPIPVEGLN--KVSSISA 232
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVAC 149
G ++S A DG ++ WG N+ GQ+G D + QN+ ++ ++
Sbjct: 233 GKYYSMALKSDGTVWTWGENDYGQLG----------DGTTATRLSPVQVQNLSGIIAISS 282
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H+LAL DD ++W G NE QL G
Sbjct: 283 GNSHSLALKDDGTVWAWGDNESGQLGDG 310
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/181 (29%), Positives = 78/181 (43%), Gaps = 24/181 (13%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ I CG+ AL +G V++WGN G+LG T + P E + + IS
Sbjct: 477 IKSIFCGYSTSFALKPDGTVWAWGNNEYGELG--KGFTTRVIYPTETLNIGDIKA--ISI 532
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVAC 149
G H A DG ++AWG N GQ+G D S I + ++
Sbjct: 533 GSSHCLALKNDGTVWAWGDNRYGQLG----------DGTTTIKSLPVQVSGISGITAISA 582
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS-----QVSVMTRLSVPEHVKNCPIVKLF 204
G H+LAL D ++W G N QL G QVS ++ ++V + NC I + F
Sbjct: 583 GGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITV---ISNC-IYRSF 638
Query: 205 A 205
A
Sbjct: 639 A 639
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 16/113 (14%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
++++S G H+ A DG ++A G N+ GQ+G +D ++ P P+ KV
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTID--INSPIPVEGLN-------KV 227
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
++ G +++AL D ++W G N+Y QL G + TRLS P V+N
Sbjct: 228 SSISAGKYYSMALKSDGTVWTWGENDYGQLGDG------TTATRLS-PVQVQN 273
Score = 45.1 bits (105), Expect = 0.023, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL-GVVQISAGGWHSAARTQ 100
+AL +G VF+WG GQLG ++ + P +SGL GV +++ S
Sbjct: 779 VALKNDGKVFTWGANDYGQLGDGTTTARVTVAP-----VSGLEGVAGVASSDTTSMVLMN 833
Query: 101 DGFLYAWGWNNGGQVG 116
DG + AWG NN GQ+G
Sbjct: 834 DGTIRAWGKNNFGQLG 849
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 50/192 (26%), Positives = 73/192 (38%), Gaps = 58/192 (30%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ I CG H LAL +G V++WG + GQ G + T N+ P ++ LSG V I+
Sbjct: 673 IIAIECGTYHNLALKNDGTVWAWGKNNFGQFG-DGTTTTTNI-PVQVSGLSG--VKAIAV 728
Query: 91 GG-----------------------------WHSA----------------ARTQDGFLY 105
GG W +A A DG ++
Sbjct: 729 GGNRSIALKSDGTVWQWGRILVSVSPSTVETWTTARQVDGLSEIVSISNNVALKNDGKVF 788
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
WG N+ GQ+G +G V P+S E V VA ++ L +D ++
Sbjct: 789 TWGANDYGQLG-DGTTTARV-TVAPVSGLEG-------VAGVASSDTTSMVLMNDGTIRA 839
Query: 166 CGWNEYNQLSMG 177
G N + QL G
Sbjct: 840 WGKNNFGQLGNG 851
>gi|281350338|gb|EFB25922.1| hypothetical protein PANDA_008494 [Ailuropoda melanoleuca]
Length = 197
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 72/155 (46%), Gaps = 33/155 (21%)
Query: 51 FSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWN 110
FSWG G GQLG+ + +A EPR + AL GL + +++AGGWHS ++ G +Y WGWN
Sbjct: 1 FSWGQGRHGQLGHGT--LEAEPEPRLLEALQGLPMAEVAAGGWHSVCVSEAGDIYIWGWN 58
Query: 111 NGGQV------------------------GVEGKLDLVVHD--PHPMSWSEDFDS----- 139
GQ+ G EG+ D P P + F +
Sbjct: 59 ESGQLALPTRSLAEDGKTVAKEASGLNEGGSEGRRTARAEDGAPAPFIALQPFPALLDLP 118
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
Q+ V +CGSRHT + L+ GW +Y QL
Sbjct: 119 QDADAVQASCGSRHTAVVTRTGELYTWGWGKYGQL 153
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ L + ++A G H + +++ G ++ WG GQL P+ D +E
Sbjct: 22 PRLLEALQGLPMAEVAAGGWHSVCVSEAGDIYIWGWNESGQLALPTRSLAEDGKTVAKEA 81
Query: 78 RALSGLG----------------------------------VVQISAGGWHSAARTQDGF 103
L+ G VQ S G H+A T+ G
Sbjct: 82 SGLNEGGSEGRRTARAEDGAPAPFIALQPFPALLDLPQDADAVQASCGSRHTAVVTRTGE 141
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G + L P + E F + ++V V+CG +T
Sbjct: 142 LYTWGWGKYGQLGHKDTTSL--DRPRRV---EYFVDKQLQVRAVSCGPWNT 187
>gi|242038901|ref|XP_002466845.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
gi|241920699|gb|EER93843.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
Length = 485
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 25 HFLD-----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIR 78
FLD + + ++CG H A+++ G V++WG GS GQLG+ S D + PR I
Sbjct: 218 RFLDDAPEQVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRRIV 277
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ V +S GG HS A T+ G LYAWG + GQ+GV + + D
Sbjct: 278 ALDGIVVRDVSCGGVHSCAVTESGALYAWGGGHVGQLGVGPQGGFFSCSLN----GSDML 333
Query: 139 SQNIKVVDV-------ACGSRHTLALCDDNSLWGCGWNEYNQ 173
+NI V+ + CG HTL D ++G G+N Y Q
Sbjct: 334 LRNIPVLVIPSGVRLATCGHSHTLVSMKDGRIYGWGYNSYGQ 375
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 42/203 (20%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQISA 90
TDIACG +H A+ +G +F+WG GQLG GT+ + EP+++++L V +S
Sbjct: 63 TDIACGREHTAAVASDGSLFTWGANEFGQLG---DGTEESAKEPKKVKSLETEFVKSVSC 119
Query: 91 GGWHSAA----RTQDGF-----LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G +AA R DG L+ WG N G +P + F + N
Sbjct: 120 GAHCTAAVAEPRENDGTVSKSRLWVWGQNQGSD--------------YPRLFWGAF-TPN 164
Query: 142 IKVVDVACGSRHTLALCDDNSL--WGCGWNEYNQLSMG------CGVSQVSVMTRL--SV 191
+ V+CG+ H +AL +D L WG +NEY QL G G ++ R
Sbjct: 165 TVIKQVSCGAVHVMALSEDGLLQAWG-SYNEYGQLGRGRTSQGLQGARVLNAYARFLDDA 223
Query: 192 PEHVKNCPIVKLFAEHWNSARLS 214
PE VK IV++ +++A +S
Sbjct: 224 PEQVK---IVRVSCGEYHTAAIS 243
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-------YPSSGTDAN 71
+P R+ +VV D++CG H A+T+ G +++WG G GQLG + S ++
Sbjct: 272 IPRRIVALDGIVVRDVSCGGVHSCAVTESGALYAWGGGHVGQLGVGPQGGFFSCSLNGSD 331
Query: 72 MEPREIRALS-GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
M R I L GV + G H+ +DG +Y WG+N+ GQ E P P
Sbjct: 332 MLLRNIPVLVIPSGVRLATCGHSHTLVSMKDGRIYGWGYNSYGQAANE--KSTYAWFPSP 389
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ W +V +A G H+ L D SL
Sbjct: 390 VDWCVG------EVRRLAAGGGHSAVLTDACSL 416
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 20/162 (12%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGN-GSRGQL--GYPSSGTDA----NMEPREI-RA 79
+ V+ ++CG H +AL+++G++ +WG+ GQL G S G N R + A
Sbjct: 164 NTVIKQVSCGAVHVMALSEDGLLQAWGSYNEYGQLGRGRTSQGLQGARVLNAYARFLDDA 223
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG----VEGKLDLVVHDPHPMSWSE 135
+ +V++S G +H+AA +++G +Y WG + GQ+G G +L+ +
Sbjct: 224 PEQVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRRIVAL---- 279
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I V DV+CG H+ A+ + +L+ G QL +G
Sbjct: 280 ----DGIVVRDVSCGGVHSCAVTESGALYAWGGGHVGQLGVG 317
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 104 LYAWGWNNGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y WG+N+ GQ +GK L + P + + ++++ D+ACG HT A+ D S
Sbjct: 21 IYIWGYNHSGQTARKGKECHLRIPKSLPPKLFKLGNGKSLRWTDIACGREHTAAVASDGS 80
Query: 163 LWGCGWNEYNQLSMG 177
L+ G NE+ QL G
Sbjct: 81 LFTWGANEFGQLGDG 95
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 15/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ +G V+SWG G G+LG+ +G D P+
Sbjct: 4044 PTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCD---HPQL 4100
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL G +V I+ GG HSAA T G +Y WG G++G D + P +
Sbjct: 4101 IDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQM--KPKLVETLIG 4158
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
F KV+D+ACGS TL + DD+++W G +Y +L G
Sbjct: 4159 F-----KVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4196
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ D+ V + CG LALT+ G V++WG G +LG+ G++ ++ P+ +
Sbjct: 670 PKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGH---GSENHVRFPKLVE 726
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L+G + +++ G H A T DG +Y WG N+ GQVG + + V +P ++
Sbjct: 727 GLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETN--VSEPTLLTLL---- 780
Query: 139 SQNIKVVDVACGSRHTLALCDDNS 162
Q +VD+ CG ++A N+
Sbjct: 781 -QGKNIVDIDCGPNQSIAWSSSNT 803
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P +++ L V + CG +ALT+ G V++WG G +LG+ G+D ++ P++I
Sbjct: 4203 IPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGH---GSDEHVRHPKKI 4259
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G ++ I+ G H A + G ++ WG N+ GQ+G +G ++ +H P +
Sbjct: 4260 AALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLG-DGTMN-AIHRPRLV-----V 4312
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q + VACGS H+LA
Sbjct: 4313 TLQGKNINRVACGSAHSLA 4331
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ + V DIACG L +T + V+SWG+G G+LG G+D P +I
Sbjct: 4150 PKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG--RGGSDGCKIPMKI 4207
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+GLGVV++ G S A T+ G +Y WG + ++G G + H HP +
Sbjct: 4208 ESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLG-HGSDE---HVRHPKKIAA-- 4261
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
Q K++ +A GS H +A D ++ G N+ QL G G RL V KN
Sbjct: 4262 -LQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQL--GDGTMNAIHRPRLVVTLQGKN 4318
Query: 198 CPIVKLFAEH---WNSARLSVPEH 218
V + H W++ + + H
Sbjct: 4319 INRVACGSAHSLAWSTNKSTSATH 4342
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P ++ L V I CG LALT+ G V++WG G +LG+ G+D ++ +P +
Sbjct: 3220 IPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGH---GSDQHVRKPTLV 3276
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+LS +V ++ G H T G +YAWG N+ GQ G G + LV P S
Sbjct: 3277 ESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQG-NGTI-LVNRKP-----SLVL 3329
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + ++V VACGS H++A
Sbjct: 3330 NLEGVRVNRVACGSSHSIA 3348
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +++ F ++ +A D H LAL+ +G V+SWGNG G+LG+ ++ +P +I
Sbjct: 510 PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGH--GDNNSRDQPTKI 567
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ IS G +SAA T G +Y WG N G++G D V P + +D+
Sbjct: 568 TELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTV--PTLVVGLKDY 625
Query: 138 DSQNIKVVDVACGS--RHTLALCD 159
+VD+ACGS TLA+ +
Sbjct: 626 -----FIVDIACGSGDAQTLAVTN 644
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L + +ACG LAL+ EG+VFSWG+G G+LG G++ P I
Sbjct: 3167 PKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLG--RGGSEGCDIPHNI 3224
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+GLGV I G S A T+ G +Y WG + ++G G V S SE
Sbjct: 3225 ERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLG-HGSDQHVRKPTLVESLSEK- 3282
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
K+V VA G+ H L D ++ G N++ Q
Sbjct: 3283 -----KIVHVAVGALHCLCATDQGQVYAWGDNDHGQ 3313
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 89/175 (50%), Gaps = 13/175 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ + D + DIACG LA+T G+VFSWG+G G+LG S D + P+
Sbjct: 615 VPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGS--DGSKTPKL 672
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I L + V ++ G S A T+ G +Y WG + ++G G + H P E
Sbjct: 673 IEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLG-HGSEN---HVRFP-KLVEG 727
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL--SMGCGVSQVSVMTRL 189
+ + IK VA GS H LAL DD ++G G N+ Q+ + VS+ +++T L
Sbjct: 728 LNGKCIK--KVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLL 780
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A++ G +F+WG G G+LG+ + T + P+ ++A
Sbjct: 3115 PKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLT--QLRPKLVKA 3172
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G +VQ++ G + A + +G +++WG + G++G G + PH +
Sbjct: 3173 LLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDI--PHNIE----- 3225
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V + CG++ +LAL ++ G +Y +L G
Sbjct: 3226 RLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHG 3265
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + L IA G ++ +G +++ G G+ G+LG S A P ++
Sbjct: 3008 VPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVAT--PCQLT 3065
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+L+ + V + +GG H+ A T DG +++WG G++G + +L L D M E
Sbjct: 3066 SLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSL---DRPKMI--EA 3120
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
S+ I+ D+ACGS H+ A+ L+ G EY +L G ++Q+
Sbjct: 3121 LKSKRIR--DIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQL 3165
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 27/169 (15%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ V+ +A G H +ALT +G VFSWG G G+LG+ + + P+ I
Sbjct: 3061 PCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLD--RPKMI 3118
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-------VEGKLDLVVHDPHP 130
AL + I+ G HSAA + G L+ WG G++G + KL + H
Sbjct: 3119 EALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHH- 3177
Query: 131 MSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+V VACGSR TLAL + ++ G ++ +L G
Sbjct: 3178 -------------IVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRG 3213
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + L + G LA+T +G V++ G GTD + P +
Sbjct: 3991 IPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYA--TGYGAGGRLGLGGTDTILTPTLLE 4048
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + V +++GG H A + DG +Y+WG + G++G K HP +
Sbjct: 4049 SIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGC----DHP----QL 4100
Query: 137 FDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D+ Q ++VD+ACG H+ A+ ++ G Y +L G
Sbjct: 4101 IDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHG 4142
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 54/130 (41%), Gaps = 7/130 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P ALS L VQ+ G A T DG +YA
Sbjct: 3968 GTIYGWGHNHRGQLG-GVEGPKVKI-PTSCEALSALRPVQLVGGEQTLLAVTSDGKVYA- 4024
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G G D ++ S F IK V V G +H LAL D ++ G
Sbjct: 4025 TGYGAGGRLGLGGTDTILTPTLLESIQHIF----IKKVAVNSGGKHCLALSTDGKVYSWG 4080
Query: 168 WNEYNQLSMG 177
+ +L G
Sbjct: 4081 EGDDGKLGHG 4090
>gi|118363796|ref|XP_001015122.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89296889|gb|EAR94877.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 1387
Score = 83.2 bits (204), Expect = 8e-14, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
F +P R HF ++V T ++CG H + LTQ+G +S G+ GQLG ++ + + P
Sbjct: 121 FCIP-RFCHF-NIVFTSVSCGSHHSILLTQDGYAYSIGSNIYGQLGADTNQINYSYTPTL 178
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I+ L + ++ +G +H+ A T + L++WG NN GQ+G+ K + V W+
Sbjct: 179 IQKLQDYIITKVVSGAYHNIALTNENQLFSWGRNNEGQLGLVDKKIVNVFS----GWNHS 234
Query: 137 F-----------------------------------DSQNIKVVDVACGSRHTLALCDDN 161
F ++ K++ +ACG H+L L +
Sbjct: 235 FFITKQNELYSFGSGLYGQLGQGKCENSITPDKVLYHEKDQKIIKIACGETHSLLLSEQG 294
Query: 162 SLWGCGWNEYNQLSMG 177
++ CG N+ QL +G
Sbjct: 295 QVFACGENQRGQLGLG 310
Score = 45.4 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI---RALS 81
H D + IACG H L L+++G VF+ G RGQLG ++P+ + +
Sbjct: 271 HEKDQKIIKIACGETHSLLLSEQGQVFACGENQRGQLGL-GRNKKVVLQPQYLSNENLFA 329
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWG 108
++ I+ G + A + LYAWG
Sbjct: 330 SESIIDIACGRFSVAITQKTQSLYAWG 356
>gi|328850071|gb|EGF99241.1| hypothetical protein MELLADRAFT_45782 [Melampsora larici-populina
98AG31]
Length = 675
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 15/167 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+R+ + V+ + CG+DH LALT +G V+SWGNG + QLG +E R+
Sbjct: 319 VPTRVPNLSQYPVSQVVCGYDHVLALTTDGHVYSWGNGQQHQLGR------KIIERRKRN 372
Query: 79 ALSGLG-----VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV----EGKLDLVVHDPH 129
L+ +V I GG HS A Q G +Y WG N GQ+G+ D ++ P
Sbjct: 373 GLTPERLNLKHIVLIGTGGSHSFAVNQTGLVYGWGLNTRGQLGIGSTENSDADEIIPVPT 432
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ +VV + G H+L L + +WG G E +++ +
Sbjct: 433 LIESMSPDQHNGARVVAIEGGDFHSLFLLSNGEVWGVGNYENSEIGI 479
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 17/155 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA-NMEPREIRALSGLGVVQ----- 87
+ACG H L + G ++SWG LG + G + + E E R + G+VQ
Sbjct: 210 VACGGMHSLLIDGLGQIWSWGINDNAALGRKTEGIEGVDQEELESRPMLVEGLVQGSEHQ 269
Query: 88 ------ISAGGWHSAARTQDGFLYAWG--WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+SAG S A ++ G AWG +N G +G +G + V P +
Sbjct: 270 VFRAVRVSAGDSVSVAVSEKGETRAWGSFRSNDGLLGFDGNIGTEVKQLVPTRVP---NL 326
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V V CG H LAL D ++ G + +QL
Sbjct: 327 SQYPVSQVVCGYDHVLALTTDGHVYSWGNGQQHQL 361
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 16/95 (16%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME- 73
Q H P ++D +V DI+CG H LA+ +G +SWG G +LG ++E
Sbjct: 560 QCIHTPLKLDFPSPIV--DISCGTRHNLAVDDQGNAYSWGLGQSNELGQGKDEDGDDIEL 617
Query: 74 ---PREI--RALS-----GLGVVQI---SAGGWHS 95
P+++ +ALS GLG ++I AGG HS
Sbjct: 618 VETPKKLTSKALSVDGVNGLGQIKILKCEAGGTHS 652
>gi|145536544|ref|XP_001453994.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421738|emb|CAK86597.1| unnamed protein product [Paramecium tetraurelia]
Length = 229
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
L G + SQ +H+P + + + ++CG DH LTQ G V++ G +LG+
Sbjct: 18 QLGLGKNRGSSQYYHIPKICHYKIGFI--QVSCGKDHTALLTQNGHVYTMGCNEHNKLGH 75
Query: 64 PSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE--GKL 121
+ + P+ I L+ V+Q+S G H+A T DG L+ WG N+ GQ+GV+ G L
Sbjct: 76 ANK--QSLYAPQRIEQLNK--VIQVSCGSTHTACVTSDGSLFTWGDNSCGQLGVKQNGNL 131
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
+ V S + V+CG++HTL L D +G G N+ +QL G+S
Sbjct: 132 NRV--------------STLTNCIQVSCGNKHTLVLTDAQECFGFGLNDDSQL----GIS 173
Query: 182 QVSVM---TRLSVP 192
++ + T++ +P
Sbjct: 174 RLKTVFEPTKIKLP 187
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 54/144 (37%), Gaps = 50/144 (34%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG------ 67
Q + P R++ ++ ++CG H +T +G +F+WG+ S GQLG +G
Sbjct: 78 KQSLYAPQRIEQLNKVI--QVSCGSTHTACVTSDGSLFTWGDNSCGQLGVKQNGNLNRVS 135
Query: 68 ------------------TDAN---------------------MEPREIRALSGLGVVQI 88
TDA EP +I+ S + Q+
Sbjct: 136 TLTNCIQVSCGNKHTLVLTDAQECFGFGLNDDSQLGISRLKTVFEPTKIKLPS---LQQV 192
Query: 89 SAGGWHSAARTQDGFLYAWGWNNG 112
SAG S TQDG +Y G G
Sbjct: 193 SAGNLFSVFLTQDGIVYICGLGFG 216
>gi|363749193|ref|XP_003644814.1| hypothetical protein Ecym_2251 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888447|gb|AET37997.1| Hypothetical protein Ecym_2251 [Eremothecium cymbalariae
DBVPG#7215]
Length = 483
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
+ H+P R+ F + V +A G DH L L + GIV++WGNG + QLG + +
Sbjct: 206 IQHIPWRVPRFTNAKVVQMAAGKDHILFLDEHGIVYAWGNGQQYQLGRKIM-ERSRLRTL 264
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSW 133
+ RA GV I++G HS A + DG L+AWG N GQ G+ E K +V P
Sbjct: 265 DPRAFGLDGVKYIASGENHSFALSDDGRLFAWGLNQFGQCGISTEVKDGAMVTVP----- 319
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
+E +N++V VA G H+L L ++ L+ G + +G S++ T
Sbjct: 320 TEVVLPENVRVKAVAAGEHHSLVLDENGDLYTFG--RLDMFEVGIPKSKLPESTYTDAHN 377
Query: 194 HVKNCPI 200
+ P+
Sbjct: 378 EPRAVPV 384
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 24/201 (11%)
Query: 8 GPLKMLSQVFHMPSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGYP 64
G L L M R LD + V +A + L + G V++WG + G LG+
Sbjct: 141 GDLNELESTPTMLPRDSLPLDQMKVIQLAATDNMSCVLFENGDVYAWGTFRCNEGMLGFY 200
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKLD 122
P + + VVQ++AG H + G +YAWG Q+G + +
Sbjct: 201 QDAIAIQHIPWRVPRFTNAKVVQMAAGKDHILFLDEHGIVYAWGNGQQYQLGRKIMERSR 260
Query: 123 LVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
L DP F +K +A G H+ AL DD L+ G N++ Q CG+S
Sbjct: 261 LRTLDPRA------FGLDGVKY--IASGENHSFALSDDGRLFAWGLNQFGQ----CGIST 308
Query: 183 -------VSVMTRLSVPEHVK 196
V+V T + +PE+V+
Sbjct: 309 EVKDGAMVTVPTEVVLPENVR 329
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGVVQI 88
V IA G +H AL+ +G +F+WG GQ G + D M P E+ + V +
Sbjct: 274 VKYIASGENHSFALSDDGRLFAWGLNQFGQCGISTEVKDGAMVTVPTEVVLPENVRVKAV 333
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKL-DLVVHDPHPMSWSEDFDSQNIKVVD 146
+AG HS ++G LY +G + +VG+ + KL + D H + ++ V
Sbjct: 334 AAGEHHSLVLDENGDLYTFGRLDMFEVGIPKSKLPESTYTDAHNEPRAVPVPTKLTGVPK 393
Query: 147 ---VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+A GS H+LA+ ++ ++ G+ E ++G G + + T P ++KN
Sbjct: 394 FNFIAAGSHHSLAIAENGIVYSWGFGE--TYAVGLGPTGEDIET----PTNIKNT 442
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG------TDANMEPREIRALS 81
++ V +A G H L L + G ++++G ++G P S TDA+ EPR + +
Sbjct: 327 NVRVKAVAAGEHHSLVLDENGDLYTFGRLDMFEVGIPKSKLPESTYTDAHNEPRAVPVPT 386
Query: 82 GL-GVVQ---ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L GV + I+AG HS A ++G +Y+WG+ VG+ G + P + ++
Sbjct: 387 KLTGVPKFNFIAAGSHHSLAIAENGIVYSWGFGETYAVGL-GPTGEDIETPTNI---KNT 442
Query: 138 DSQNIKVVDVACGSRHTLA 156
+QN +++ V CG + +++
Sbjct: 443 ATQNHRIMFVGCGGQFSVS 461
>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 648
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 83/157 (52%), Gaps = 15/157 (9%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+A G DH LAL +G V++WG + GQLG SS D++ EP +R LS GVV +SAG
Sbjct: 1 MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSS--DSHSEPVRVRGLS--GVVAVSAGEG 56
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSR 152
HS A +DG ++AWG N GQ+G D S SE + VV V+ G
Sbjct: 57 HSLALHRDGTVWAWGDNALGQLG----------DGTSDSHSEPVRVPGLSGVVAVSAGDN 106
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
H+LAL D S+W G N +QL G SV RL
Sbjct: 107 HSLALRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRL 143
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 20/179 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ G H LAL ++G V++WG+ + GQLG +S D++ EP + LSG VV +SA
Sbjct: 48 VVAVSAGEGHSLALHRDGTVWAWGDNALGQLGDGTS--DSHSEPVRVPGLSG--VVAVSA 103
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI-KVVDVAC 149
G HS A DG ++AWG NN Q+G P S+S + +++ +VV VA
Sbjct: 104 GDNHSLALRSDGSVWAWGDNNSDQLGGA---------PGAQSYSVPWRLEDLSEVVAVAA 154
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
G H+LA+ D ++W G N QL G +++T +P+ V+ V + W
Sbjct: 155 GGNHSLAVRADGTVWAWGDNFAGQLGDG------NILTTRWLPKQVQGLSGVVAASAGW 207
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 24/192 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ +V +A G H +AL +G V++WG GQL + S T+ + P +R
Sbjct: 341 TPKRVQGLSRVVA--VAAGDGHSIALCADGTVWTWGYNHDGQLAHGS--TNDSPVPLHVR 396
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
LSG VV ++AG HS A DG ++AWG+N GQ+G D S +E
Sbjct: 397 ELSG--VVAVAAGALHSLAVLSDGSVWAWGYNRQGQLG----------DGSLSSSAEPVR 444
Query: 139 SQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
Q + V V+ G H+LA D +W G N + QL G + VP V+
Sbjct: 445 VQGLSGVAAVSAGLNHSLARGTDGGVWAWGGNSFGQLGEGT-------TSNALVPVRVRG 497
Query: 198 CPIVKLFAEHWN 209
V+ + +N
Sbjct: 498 LSGVETISAGFN 509
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 75/150 (50%), Gaps = 17/150 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQIS 89
V ++ G +H LA +G V++WG S GQLG GT +N + P +R LSG V IS
Sbjct: 451 VAAVSAGLNHSLARGTDGGVWAWGGNSFGQLG---EGTTSNALVPVRVRGLSG--VETIS 505
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVA 148
AG HS AR DG L+AWG N GQ+G D + S Q + V V
Sbjct: 506 AGFNHSLARASDGGLWAWGGNYTGQLG----------DGTTSNSSVPVRVQGLSGVAAVF 555
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
G H+LA+ D S+W G N + QL G
Sbjct: 556 AGLNHSLAVRTDGSVWAWGINSFGQLGEGT 585
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 28/185 (15%)
Query: 2 CDHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQL 61
D L P +Q + +P R++ ++V +A G +H LA+ +G V++WG+ GQL
Sbjct: 125 SDQLGGAPG---AQSYSVPWRLEDLSEVVA--VAAGGNHSLAVRADGTVWAWGDNFAGQL 179
Query: 62 GYPSSGTDANME-----PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
G D N+ P++++ LSG VV SAG HS DG ++AWG N GQ+G
Sbjct: 180 G------DGNILTTRWLPKQVQGLSG--VVAASAGWAHSMVALSDGSVWAWGNNTSGQLG 231
Query: 117 VEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
V + P Q ++ V+ VA G ++LAL D +LW G N++ Q
Sbjct: 232 ---NGISVGYGALPE------QVQGLRGVMAVAAGGLYSLALRSDGTLWAWGSNDHGQRG 282
Query: 176 MGCGV 180
G V
Sbjct: 283 DGSTV 287
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 85/177 (48%), Gaps = 24/177 (13%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +A G + LAL +G +++WG+ GQ G S T +R LSG VV ++A
Sbjct: 251 VMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGS--TVYLSSSVRVRWLSG--VVAMAA 306
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD-PHPMSWSEDFDSQNI-KVVDVA 148
G HS A DG L+AWG N GQ+G + D HD P + Q + +VV VA
Sbjct: 307 GSAHSLAVRSDGTLWAWGANYYGQLGDGTRKD---HDTPKRV--------QGLSRVVAVA 355
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
G H++ALC D ++W G+N QL+ G VP HV+ V A
Sbjct: 356 AGDGHSIALCADGTVWTWGYNHDGQLAHGS-------TNDSPVPLHVRELSGVVAVA 405
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G+ H + +G V++WGN + GQLG S P +++ L G V+ ++A
Sbjct: 200 VVAASAGWAHSMVALSDGSVWAWGNNTSGQLGNGIS-VGYGALPEQVQGLRG--VMAVAA 256
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVAC 149
GG +S A DG L+AWG N+ GQ G D + S + + VV +A
Sbjct: 257 GGLYSLALRSDGTLWAWGSNDHGQRG----------DGSTVYLSSSVRVRWLSGVVAMAA 306
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
GS H+LA+ D +LW G N Y QL G
Sbjct: 307 GSAHSLAVRSDGTLWAWGANYYGQLGDGT 335
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
V I+ GF+H LA +G +++WG GQLG GT +N P ++ LSG V +
Sbjct: 501 VETISAGFNHSLARASDGGLWAWGGNYTGQLG---DGTTSNSSVPVRVQGLSG--VAAVF 555
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VA 148
AG HS A DG ++AWG N+ GQ+G EG + Q + ++ VA
Sbjct: 556 AGLNHSLAVRTDGSVWAWGINSFGQLG-EGTTNTSF---------APVRVQGLSGMETVA 605
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
GS H+L++ D S+W G N + QL G
Sbjct: 606 AGSLHSLSVGSDGSMWSWGNNHHGQLGHGL 635
>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
Length = 527
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRA-LSGLGVVQI 88
VT+++CG H +ALT +G V++WG + GQ+G SG+ AN PR + + L VV I
Sbjct: 130 VTEVSCGSHHTIALTTDGEVYAWGYNNSGQVG---SGSTANQPTPRRVSSCLQNKVVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G Y WG+N GQ+G+ ++ + + Q I ++ VA
Sbjct: 187 ACGQLCSMAVLDNGETYGWGYNCNGQLGLG-------NNGNQQTPCRIAALQGINIIQVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTLAL D+ ++ G N Y QL G
Sbjct: 240 CGYAHTLALTDEGFVYSWGANSYGQLGTG 268
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T +G V++WG+ QLG + T+ + P +
Sbjct: 65 PRRIDILCGKKIISLSYGTGPHVVIATADGEVYAWGHNGYSQLG--NGTTNHGLTPALVS 122
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V ++S G H+ A T DG +YAWG+NN GQVG + P P S
Sbjct: 123 TNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGS----TANQPTPRRVSSCL 178
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ D+ +G G+N QL +G
Sbjct: 179 --QNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLG 216
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 12/139 (8%)
Query: 20 PSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ L + VV +IACG +A+ G + WG GQLG ++G P I
Sbjct: 171 PRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNNGN--QQTPCRIA 228
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ ++Q++ G H+ A T +GF+Y+WG N+ GQ+G K + V P ++ ++
Sbjct: 229 ALQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTGNKSNQAV--PTLINMDKE-- 284
Query: 139 SQNIKVVDV-ACGSRHTLA 156
++V+V AC + HT A
Sbjct: 285 ----RMVEVAACHTSHTSA 299
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + + +T VF+ G G LG T + +EPR I L G
Sbjct: 17 ELRLIRQACVFGSAANEAIYVTVNDEVFALGTNCSGCLGL--GDTQSTIEPRRIDILCGK 74
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
++ +S G G H T DG +YAWG N Q+G G + H P S + +
Sbjct: 75 KIISLSYGTGPHVVIATADGEVYAWGHNGYSQLG-NGTTN---HGLTPALVSTNLIGK-- 128
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V +V+CGS HT+AL D ++ G+N Q+ G +Q P V +C
Sbjct: 129 RVTEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQ-------PTPRRVSSC 177
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P R+ + + +ACG+ H LALT EG V+SWG S GQLG +G +N +
Sbjct: 222 QTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLG---TGNKSNQAVPTL 278
Query: 78 RALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVG 116
+ +V+++A SAA+TQ G + WG G V
Sbjct: 279 INMDKERMVEVAACHTSHTSAAKTQSGQVLMWGQCRGQAVA 319
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 78/146 (53%), Gaps = 12/146 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQISAG 91
+ACG H + LT +G V++WG + GQ+G SG+ AN PR++ + L V+ I+ G
Sbjct: 132 VACGSHHSMVLTCDGEVYAWGYNNSGQVG---SGSTANQPIPRKVTSCLQNKTVIGIACG 188
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
S A +G +YAWG+N GQ+G L + P P + Q I+V V CG
Sbjct: 189 QMSSMAVVDNGEVYAWGYNGNGQLG----LGSSGNQPTPCRIAA---LQGIRVEQVVCGY 241
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMG 177
HTLAL D+ ++ G N Y QL G
Sbjct: 242 AHTLALTDEGVMYAWGANSYGQLGTG 267
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + +T +G V+SWG+ + QLG + T+ + P ++
Sbjct: 64 PRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLG--NGSTNQALSPCQVS 121
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L ++ G HS T DG +YAWG+NN GQVG + P P +
Sbjct: 122 TNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGS----TANQPIPRKVTSCL 177
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN V+ +ACG ++A+ D+ ++ G+N QL +G
Sbjct: 178 --QNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLG 215
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++ L + V IACG +A+ G V++WG GQLG SSG P I
Sbjct: 169 IPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPT--PCRI 226
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V Q+ G H+ A T +G +YAWG N+ GQ+G K + +P+ D
Sbjct: 227 AALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSN----QSYPVQVIVDK 282
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+ ++V++ AC S HT A
Sbjct: 283 E----RIVEIAACHSSHTSA 298
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 35 ACGF---DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG 91
AC F + L +T+ VF G S G LG + + +EPR I LSG +V +S G
Sbjct: 24 ACVFGAGNEVLYITKNDEVFVMGTNSSGCLG--TGDAQSIIEPRRIDMLSGKRIVSLSYG 81
Query: 92 -GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H T DG +Y+WG N Q+G G + + P S + N K VACG
Sbjct: 82 SGPHVVIVTSDGEVYSWGHNAYSQLG-NGSTNQAL---SPCQVSTNLI--NKKAHSVACG 135
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
S H++ L D ++ G+N Q+ G +Q +P V +C
Sbjct: 136 SHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQ-------PIPRKVTSC 176
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V + CG+ H LALT EG++++WG S GQLG +G +N
Sbjct: 223 PCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLG---TGNKSNQSYPVQVI 279
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +V+I+A SAA++Q G +Y WG G V
Sbjct: 280 VDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCRGQSV 317
>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
Length = 526
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 12/146 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQISAG 91
+ACG H + LT +G V++WG + GQ+G SG+ AN PR++ + L V+ I+ G
Sbjct: 132 VACGSHHSMVLTCDGEVYAWGYNNSGQVG---SGSTANQPIPRKVTSCLQNKTVIGIACG 188
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
S A +G +YAWG+N GQ+G+ + P P + Q I+V V CG
Sbjct: 189 QMSSMAVVDNGEVYAWGYNGNGQLGLGSSGN----QPTPCRIAA---LQGIRVEQVVCGY 241
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMG 177
HTLAL D+ ++ G N Y QL G
Sbjct: 242 AHTLALTDEGVMYAWGANSYGQLGTG 267
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + +T +G V+SWG+ + QLG + T+ + P ++
Sbjct: 64 PRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLG--NGSTNQALSPCQVS 121
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L + ++ G HS T DG +YAWG+NN GQVG + P P +
Sbjct: 122 TNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGS----TANQPIPRKVTSCL 177
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN V+ +ACG ++A+ D+ ++ G+N QL +G
Sbjct: 178 --QNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLG 215
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++ L + V IACG +A+ G V++WG GQLG SSG P I
Sbjct: 169 IPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPT--PCRI 226
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V Q+ G H+ A T +G +YAWG N+ GQ+G K + +P+ D
Sbjct: 227 AALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSN----QSYPVQVIVDK 282
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+ ++V++ AC S HT A
Sbjct: 283 E----RIVEIAACHSSHTSA 298
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 28 DLVVTDIACGF---DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG 84
DL AC F + L LT+ VF G S G LG + + +EPR I LSG
Sbjct: 17 DLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLG--TGDAQSIIEPRRIDMLSGKR 74
Query: 85 VVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
+V +S G G H T DG +Y+WG N Q+G G + + P S + N K
Sbjct: 75 IVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLG-NGSTNQAL---SPCQVSTNLI--NKK 128
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+ VACGS H++ L D ++ G+N Q+ G +Q +P V +C
Sbjct: 129 AISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQ-------PIPRKVTSC 176
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V + CG+ H LALT EG++++WG S GQLG +G +N
Sbjct: 223 PCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLG---TGNKSNQSYPVQVI 279
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +V+I+A SAA++Q G +Y WG G V
Sbjct: 280 VDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCRGQSV 317
>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
Length = 3971
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 13/153 (8%)
Query: 29 LVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV 85
VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D PR+I AL G +
Sbjct: 3265 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRRPRQIEALQGEEI 3322
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+Q++ G HSA + DG L+ +G + G++G+ + + P ++ E V
Sbjct: 3323 IQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKI--PERVTALE-----GQMVG 3375
Query: 146 DVACGSRHTLAL-CDDNSLWGCGWNEYNQLSMG 177
V CG HTLA+ D N++W G +Y +L +G
Sbjct: 3376 QVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLG 3408
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ +V + CG +H LA++ +G V+S+G+G G+LG +S A P+ +
Sbjct: 3362 IPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNS--TAKSTPQRV 3419
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+GV ++ G S A T+DG ++ +G +G + P + E F
Sbjct: 3420 DPLCGIGVKKVCCGTQFSVALTKDGRVFTFGQER--LIGQPESRSRNHNRPQQVPALEAF 3477
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V DV G+ H+LAL +W G N QL +G
Sbjct: 3478 -----FVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIG 3512
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 20/104 (19%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S+ + P ++ V D+ G +H LALT G V++WG+ GQLG T+A E
Sbjct: 3462 SRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGI--GDTNARRE 3519
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
P + AL G V Q+ WG N GQ+G+
Sbjct: 3520 PCLVTALQGKNVRQV------------------WGSNGDGQLGI 3545
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI--SAG 91
I CG + + G V + G GS G+LG +S D + I AL G V Q+ S G
Sbjct: 3218 IICGQNCTFVIQANGTVQACGEGSYGRLGQGNS--DDLHQLTIISALQGFVVTQLVTSCG 3275
Query: 92 G-WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
HS A T+ G +++WG + G++G G D P Q +++ +ACG
Sbjct: 3276 SDGHSMALTESGEVFSWGDGDYGKLG-HGNSD---RQRRPRQIEA---LQGEEIIQMACG 3328
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+H+ + D L+ G +Y +L +G
Sbjct: 3329 FKHSAVVSADGKLFTFGNGDYGRLGLG 3355
>gi|328872806|gb|EGG21173.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 900
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
K++ +V P + + V D++ G+ + A+T+ G VF+WG +GQLG
Sbjct: 209 KIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHG 268
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
P++++ + + +V +S G H + G L+ WG GQ+G GKL +H
Sbjct: 269 --LPQQVKFFTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLG-HGKLKSCLHPKKV 325
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+++SE D N KV VACG+ T+AL D LW G EY QL
Sbjct: 326 LAFSEA-DQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQL 368
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS + + + + ACG H LA+T+ G V+S+G G GQLG+P A+ P I A
Sbjct: 25 PSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRGREGQLGHPEKYNTAH--PNVITA 82
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWG 108
L+ + +++ G +HS A T G +Y WG
Sbjct: 83 LAHERITRVACGNFHSLALTDTGKIYEWG 111
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 23/172 (13%)
Query: 17 FH-MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
FH +P ++ F ++ + ++CG H ++ +G +F+WG G GQLG+ + + P+
Sbjct: 266 FHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGH--GKLKSCLHPK 323
Query: 76 EIRALS-----GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK---------- 120
++ A S V Q++ G + A T DG L+++G GQ+G +
Sbjct: 324 KVLAFSEADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGG 383
Query: 121 ----LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
+ H + + + + ++KV V CG HT+ + +DN ++ GW
Sbjct: 384 NGNGNEREAHLQYAVPQQVEALA-SVKVKQVTCGHLHTIVVTEDNDVYSWGW 434
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 27/150 (18%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG---------------TDAN 71
L+ V +ACG + +ALT +G ++S+G+G GQLG +A+
Sbjct: 334 LNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGGNGNGNEREAH 393
Query: 72 ME---PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHD 127
++ P+++ AL+ + V Q++ G H+ T+D +Y+WGW G +G + K LV
Sbjct: 394 LQYAVPQQVEALASVKVKQVTCGHLHTIVVTEDNDVYSWGWGASGCLGFGDRKFQLVPQR 453
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
+S V ++ G +H+L +
Sbjct: 454 VPALSGE--------IVSSISAGEKHSLVV 475
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ +P +++ + V + CG H + +T++ V+SWG G+ G LG+ + P+
Sbjct: 396 YAVPQQVEALASVKVKQVTCGHLHTIVVTEDNDVYSWGWGASGCLGF--GDRKFQLVPQR 453
Query: 77 IRALSGLGVVQISAGGWHS-AARTQDGFLYAWGWNN 111
+ ALSG V ISAG HS R+ D +A+ + N
Sbjct: 454 VPALSGEIVSSISAGEKHSLVVRSTDTTTFAFDYRN 489
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V S+G + QLG+ +++P I+ LSG+ +V + G HS A T+ G +Y++G
Sbjct: 3 VISFGVNKQSQLGHALEKD--HLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGR 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
GQ+G K + HP + + ++ VACG+ H+LAL D ++
Sbjct: 61 GREGQLGHPEKYNTA----HPNVITA---LAHERITRVACGNFHSLALTDTGKIY 108
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 12/146 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQISAG 91
+ACG H + LT +G V++WG + GQ+G SG+ AN PR++ + L V+ I+ G
Sbjct: 132 VACGSHHSMVLTCDGEVYAWGYNNSGQVG---SGSTANQPIPRKVTSCLQNKTVIGIACG 188
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
S A +G +YAWG+N GQ+G+ + P P + Q I+V V CG
Sbjct: 189 QMSSMAVVDNGEVYAWGYNGNGQLGLGSSGN----QPTPCRIAA---LQGIRVEQVVCGY 241
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMG 177
HTLAL D+ ++ G N Y QL G
Sbjct: 242 AHTLALTDEGVMYAWGANSYGQLGTG 267
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
+Q P R+D + ++ G H + +T +G V+SWG+ + QLG + T+ +
Sbjct: 58 AQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLG--NGSTNQAL 115
Query: 73 EPREIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P ++ L + ++ G HS T DG +YAWG+NN GQVG + P P
Sbjct: 116 SPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGS----TANQPIPR 171
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ QN V+ +ACG ++A+ D+ ++ G+N QL +G
Sbjct: 172 KVTSCL--QNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLG 215
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++ L + V IACG +A+ G V++WG GQLG SSG P I
Sbjct: 169 IPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPT--PCRI 226
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V Q+ G H+ A T +G +YAWG N+ GQ+G K + +P+ D
Sbjct: 227 AALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSN----QSYPVQVIVDK 282
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+ ++V++ AC S HT A
Sbjct: 283 E----RIVEIAACHSSHTSA 298
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 28 DLVVTDIACGF---DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG 84
DL AC F + L LT+ VF G S G LG + + +EPR I LSG
Sbjct: 17 DLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLG--TGDAQSILEPRRIDMLSGKR 74
Query: 85 VVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
+V +S G G H T DG +Y+WG N Q+G G + + P S + N K
Sbjct: 75 IVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLG-NGSTNQAL---SPCQVSTNLI--NKK 128
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+ VACGS H++ L D ++ G+N Q+ G +Q +P V +C
Sbjct: 129 AISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQ-------PIPRKVTSC 176
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V + CG+ H LALT EG++++WG S GQLG +G +N
Sbjct: 223 PCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLG---TGNKSNQSYPVQVI 279
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +V+I+A SAA++Q G +Y WG G V
Sbjct: 280 VDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCRGQSV 317
>gi|402578687|gb|EJW72640.1| hypothetical protein WUBG_16455 [Wuchereria bancrofti]
Length = 311
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + ++ G +H L LT G+V+S G GSRG LG+ + P+++ LS L V Q
Sbjct: 176 DESILQLSAGNEHMLILTVSGLVYSMGIGSRGVLGH--ANLRCEQHPKKVECLSPLRVTQ 233
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
++ G WHSAA T+DG +Y WGWNN GQ+G ++ ++ P P+ E
Sbjct: 234 VACGKWHSAALTEDGDVYLWGWNNFGQLGDCCEIGEILDIPAPLDILE 281
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ 140
S ++Q+SAG H T G +Y+ G G GV G +L + HP
Sbjct: 175 SDESILQLSAGNEHMLILTVSGLVYSMGI---GSRGVLGHANLRC-EQHPKKVE---CLS 227
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPI 200
++V VACG H+ AL +D ++ GWN + QL C + ++ L +P + I
Sbjct: 228 PLRVTQVACGKWHSAALTEDGDVYLWGWNNFGQLGDCCEIGEI-----LDIPAPLDILEI 282
Query: 201 VKLFAEHWNSARLSVPEH 218
+ A + N+ L +H
Sbjct: 283 IVEIAAYGNTTWLKRADH 300
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
P +++ L VT +ACG H ALT++G V+ WG + GQLG
Sbjct: 220 PKKVECLSPLRVTQVACGKWHSAALTEDGDVYLWGWNNFGQLG 262
>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
rubripes]
Length = 527
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRA-LSGLGVVQI 88
V ++ACG H +ALT +G VF+WG + GQ+G SG+ AN PR + + L VV I
Sbjct: 130 VIEVACGSHHTIALTTDGEVFAWGYNNSGQVG---SGSTANQPTPRRVSSCLQNKVVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G+ ++ + + Q + V+ VA
Sbjct: 187 ACGQLCSMAVLDSGEIYGWGYNCNGQLGLG-------NNGNQQTPCRIAALQGVNVIQVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
CG HT+AL D+ ++ G N Y QL G +Q
Sbjct: 240 CGYAHTIALTDEGFVYSWGANSYGQLGTGNKCNQ 273
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 12/161 (7%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREI 77
P R+D + ++ G H T +G VFSWG+ QLG +GT + + P +
Sbjct: 65 PRRIDVLCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLG---NGTSTHGLTPALV 121
Query: 78 RA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L G V++++ G H+ A T DG ++AWG+NN GQVG + P P S
Sbjct: 122 STNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGS----TANQPTPRRVSSC 177
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ D ++G G+N QL +G
Sbjct: 178 L--QNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLG 216
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 20 PSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ L + VV +IACG +A+ G ++ WG GQLG ++G P I
Sbjct: 171 PRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQT--PCRIA 228
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
AL G+ V+Q++ G H+ A T +GF+Y+WG N+ GQ+G K + V
Sbjct: 229 ALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNKCNQAV 275
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L +T VF+ G G LG + +EPR I L G
Sbjct: 17 ELKLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGL--GDLQSTIEPRRIDVLCGK 74
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+V +S G G H A T DG +++WG N Q+G H P S + +
Sbjct: 75 KIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLGNGTS----THGLTPALVSTNLLGK-- 128
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS HT+AL D ++ G+N Q+ G +Q P V +C
Sbjct: 129 RVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ-------PTPRRVSSC 177
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA--NMEPR 75
P R+ + V +ACG+ H +ALT EG V+SWG S GQLG + A +
Sbjct: 222 QTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNKCNQAVPTLINT 281
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
E +S + S SAA+TQ G + WG G V
Sbjct: 282 EKERMSEVAACHTS---HTSAAKTQSGQVLMWGQCRGQAVA 319
>gi|428184219|gb|EKX53075.1| hypothetical protein GUITHDRAFT_56334, partial [Guillardia theta
CCMP2712]
Length = 146
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLG--VVQISA 90
+A G H LALT +G V++WG + GQLG S+ N+ P E+ + L V++++A
Sbjct: 1 VAAGSFHSLALTSQGNVYAWGWNNYGQLGMGSADMRPNIPYPSEVLFFASLNSKVIKLAA 60
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HSAA T G LY WG N GQ+G +G L P +S D + + ++V DVACG
Sbjct: 61 GFSHSAAVTSGGVLYTWGNNKYGQLG-QGDY-LARRLPTAVSGFYDSNGRVLQVFDVACG 118
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
H LAL + +W G N QL
Sbjct: 119 LYHCLALSEQGLVWSFGLNSRGQL 142
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++AG +HS A T G +YAWGWNN GQ+G+ G D+ + P+P S F S N KV+ +
Sbjct: 1 VAAGSFHSLALTSQGNVYAWGWNNYGQLGM-GSADMRPNIPYP-SEVLFFASLNSKVIKL 58
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
A G H+ A+ L+ G N+Y QL G
Sbjct: 59 AAGFSHSAAVTSGGVLYTWGNNKYGQLGQG 88
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 20 PSRMDHF--LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
PS + F L+ V +A GF H A+T G++++WGN GQL G + R
Sbjct: 42 PSEVLFFASLNSKVIKLAAGFSHSAAVTSGGVLYTWGNNKYGQL-----GQGDYLARRLP 96
Query: 78 RALSG--------LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
A+SG L V ++ G +H A ++ G ++++G N+ GQ+G
Sbjct: 97 TAVSGFYDSNGRVLQVFDVACGLYHCLALSEQGLVWSFGLNSRGQLGT 144
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 5/50 (10%)
Query: 18 HMPSRMDHFLD-----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
+P+ + F D L V D+ACG HCLAL+++G+V+S+G SRGQLG
Sbjct: 94 RLPTAVSGFYDSNGRVLQVFDVACGLYHCLALSEQGLVWSFGLNSRGQLG 143
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L V+ I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVMNI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T +G VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN V+++ACG ++A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG P +
Sbjct: 194 IPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSAHTSA 323
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG +++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG---TGNKSNQSYPTPVV 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 342
>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
Length = 1016
Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 56/148 (37%), Positives = 78/148 (52%), Gaps = 16/148 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG +PS+ T P+ + L+G+ +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTT-----PQIVEHLAGVPLA 194
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QISAG HS A + G +Y+WG N GQ+G L +P S E D+Q KV
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLG----LGHTESKDYP-SLIEGLDNQ--KVEF 247
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
VACG H+ L D L+ G ++ QL
Sbjct: 248 VACGGSHSALLTQDGLLFTFGAGKHGQL 275
Score = 70.1 bits (170), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ + V +ACG H LTQ+G++F++G G GQLG+ S T + P +
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS--TQNELRPCLVAE 291
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V QI+ G WH+ A D G ++++G GQ+G G D ++ P +S SE+
Sbjct: 292 LVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEEL 350
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG T++ P I
Sbjct: 182 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGL--GHTESKDYPSLIEG 239
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG HSA TQDG L+ +G GQ+G + + P +E
Sbjct: 240 LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQN----ELRPCLVAELV-- 293
Query: 140 QNIKVVDVACGSRHTLALCDD 160
+V +ACG HTLA D
Sbjct: 294 -GYRVTQIACGRWHTLAYVSD 313
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q K++ + CG H+LAL L+ G N + QL +G + T + EH+ P
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG---RKFPSTTTPQIVEHLAGVP 192
Query: 200 IVKLFAEHWNSARLSV 215
+ ++ A +S LS+
Sbjct: 193 LAQISAGEAHSMALSM 208
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L V+ I
Sbjct: 163 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVMNI 219
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 220 ACGQMCSMAVVDTGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIRVQRVA 272
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 273 CGYAHTLVLTDEGQIYAWGANSYGQLGTG 301
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T +G VF+WG+ + QLG + T+ + P I
Sbjct: 98 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 155
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 156 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVTGCL 211
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN V+++ACG ++A+ D ++ G+N QL +G
Sbjct: 212 --QNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLG 249
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG P +
Sbjct: 203 IPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 260
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 261 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 317
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 318 -----RIIEIAACHSAHTSA 332
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG +++WG S GQLG +G +N
Sbjct: 257 PCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG---TGNKSNQSYPTPVV 313
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 314 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 351
>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
Length = 611
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +D+F V +ACG + +A ++G V ++G GQLG + R
Sbjct: 214 VPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPVLLPTRLAP 273
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L V Q+S G H+A T+DG +Y +G N+ GQ+G+ KL + P P+
Sbjct: 274 PLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKLHMA--RPTPVE-----S 326
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL----SMGCGVSQVSVMTR 188
+++ VACG HTLAL DD ++ G N + QL SM C Q+ R
Sbjct: 327 LSRMRITQVACGCYHTLALSDDGKVFPFGRNNHGQLGLETSMDCLSPQLISTLR 380
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Query: 10 LKMLSQVFHMPSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
L +S+ +P+R+ LD VV ++CG+ H +T++G V+++G GQLG G
Sbjct: 258 LDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGL---GH 314
Query: 69 DANM-EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD 122
+M P + +LS + + Q++ G +H+ A + DG ++ +G NN GQ+G+E +D
Sbjct: 315 KLHMARPTPVESLSRMRITQVACGCYHTLALSDDGKVFPFGRNNHGQLGLETSMD 369
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V D+ACG + L + G VF+ G GQ ++ ++ R LS V++ +
Sbjct: 68 VVDVACGNEQTTILFENGDVFTCGYNDSGQCAIGTTERVPSL--RFSPGLSSHHTVRLFS 125
Query: 91 GG--WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H AA +GFLY G+N GQ+G+ G V + E+ + +VVDVA
Sbjct: 126 GNGSEHLAALCANGFLYTVGFNMRGQLGL-GTATTVTE----ATLVEELAGK--RVVDVA 178
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
C HT + D+ L CG N+Y QL MG
Sbjct: 179 CSYFHTAIVMDNGDLHACGCNDYGQLGMG 207
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V D+AC + H + G + + G GQLG ++ PR + V+ ++
Sbjct: 174 VVDVACSYFHTAIVMDNGDLHACGCNDYGQLGM--GDHSGHLVPRPVDYFFRHPVLAVAC 231
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G ++ A +DG + A+G N+ GQ+G++ + V+ P + D V ++CG
Sbjct: 232 GQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPVLL---PTRLAPPLD--RAVVPQLSCG 286
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
HT + +D +++ G N+Y QL +G
Sbjct: 287 YHHTAIVTEDGAVYTFGRNDYGQLGLG 313
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P + DL + DIA G H ALT +G V+ WG G G+LG + + M
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMV 292
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHD 127
P+++ L+ ++Q+S GG HS A T+DG ++++G + G++G K L+L +
Sbjct: 293 PQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKI 352
Query: 128 PHP---MSWSEDFDSQNIKVVDVACGSRHTLALCD 159
P P + +++ + +ACG RHTLA+ +
Sbjct: 353 PPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVE 387
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 13/174 (7%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G +K +S +P R+ ++ + IA G H LAL ++G + +WGN GQLG +
Sbjct: 181 GDIKQIS----VPVRVQGLENVRL--IAVGAFHNLALEEDGRLLAWGNNEYGQLG--TGD 232
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
T P ++ L L +V I+AGGWHS A T G +Y WG G++G+
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMV 292
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
P ++ + D ++ V+CG H++AL D ++ G ++ +L G V+
Sbjct: 293 PQKVNLLAEED-----IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVT 341
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 53/231 (22%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G + LA+ +G +F+WG RG LG+ N+ P ++AL+ + + Q +
Sbjct: 40 VRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENI-PSRVKALANVKITQAAI 98
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEG---------KLDLVV---------------- 125
GGWH A G YAWG N GQ G E + D+V+
Sbjct: 99 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAG 158
Query: 126 --------HDPHPMSWSEDFDSQNIKVVDV-------------ACGSRHTLALCDDNSLW 164
+ H +W + + +IK + V A G+ H LAL +D L
Sbjct: 159 GTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLL 218
Query: 165 GCGWNEYNQLSMGCGVSQVSVMTRLSVP-EHVKNCPIVKLFAEHWNSARLS 214
G NEY QL G G +Q T VP + + + +V + A W+S L+
Sbjct: 219 AWGNNEYGQL--GTGDTQ---PTSHPVPVQGLDDLTLVDIAAGGWHSTALT 264
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 20/130 (15%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ +WG+G GQLG GT+ E + AL V + +G +S A DG ++ WG
Sbjct: 7 IIAWGSGEDGQLGI---GTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG 63
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ-----NIKVVDVACGSRHTLALCDDNSL 163
WN G +G + P + +E+ S+ N+K+ A G H LA+ D
Sbjct: 64 WNQRGTLGHQ-----------PETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRA 112
Query: 164 WGCGWNEYNQ 173
+ G NEY Q
Sbjct: 113 YAWGGNEYGQ 122
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L V+ I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVMSI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T +G VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN V+ +ACG ++A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG +A+ G V+ WG GQLG SSG P +
Sbjct: 194 IPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSAHTSA 323
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG +++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG---TGNKSNQSYPTPVV 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA++Q G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQCRGQSV 342
>gi|403347572|gb|EJY73213.1| hypothetical protein OXYTRI_05658 [Oxytricha trifallax]
Length = 600
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 18/164 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-- 77
P+ ++ D + D++ GF HCL L +G VF G +R Q+G G DAN + ++I
Sbjct: 336 PTLINSLTDEKIVDMSLGFQHCLYLNDKGEVFGIGKNNRFQMG---KGKDANNQDQQIFD 392
Query: 78 RALSGLG-------VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
+ + + +I AG +HS T+ G LY G+N GQ G+ L L H P
Sbjct: 393 KYQGAIKLDYFDEPIKKIGAGKFHSVFLTESGKLYTVGFNKYGQCGLSNSLYL--HAEEP 450
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ D N+++ D+ G HTL L +DN L+G G + QL
Sbjct: 451 IEVFTD----NLRIKDIQVGWHHTLLLSEDNLLYGFGARKNGQL 490
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGG 92
+ CG+ + T + V SWG+ GQLG +G D + E P I +L+ +V +S G
Sbjct: 300 LGCGYISVIDNTHK--VMSWGDNYAGQLG---TGDDIHREDPTLINSLTDEKIVDMSLGF 354
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGK----LDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
H G ++ G NN Q+G +GK D + D + + D+ + IK +
Sbjct: 355 QHCLYLNDKGEVFGIGKNNRFQMG-KGKDANNQDQQIFDKYQGAIKLDYFDEPIK--KIG 411
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
G H++ L + L+ G+N+Y Q CG+S
Sbjct: 412 AGKFHSVFLTESGKLYTVGFNKYGQ----CGLS 440
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L VV I
Sbjct: 147 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQSKVVVNI 203
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G ++ WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 204 ACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGN----QPTPCRVAA---LQGIRVQRVA 256
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 257 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 285
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 16/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC----GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+D L IAC H + T EG VF+WG+ + QLG + T+A + P
Sbjct: 82 PRRLD---SLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNAGLVPY 136
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 137 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVT 192
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S+ VV++ACG ++A+ + ++ G+N QL +G
Sbjct: 193 GCLQSK--VVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLG 233
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L VV +IACG +A+ G VF WG GQLG SSG P +
Sbjct: 187 IPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPT--PCRV 244
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 245 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 301
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 302 -----RIIEIAACHSAHTSA 316
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 241 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVV 297
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 298 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 335
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L V+ I
Sbjct: 130 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVMNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 187 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGN----QPTPCRVAA---LQGIRVQRVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 240 CGYAHTLVLTDEGQIYAWGANSYGQLGTG 268
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T +G VF+WG+ + QLG + T+ + P I
Sbjct: 65 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 122
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 123 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVTGCL 178
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN V+++ACG ++A+ D ++ G+N QL +G
Sbjct: 179 --QNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLG 216
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG P +
Sbjct: 170 IPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 228 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 284
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 285 -----RIIEIAACHSAHTSA 299
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG +++WG S GQLG +G +N
Sbjct: 224 PCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG---TGNKSNQSYPTPVV 280
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 281 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 318
>gi|389743006|gb|EIM84191.1| RCC1/BLIP-II [Stereum hirsutum FP-91666 SS1]
Length = 472
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP--SSGTDANMEPREI 77
P + + ++ IACG +H LAL++ G V++WG+G + QLG S + + P +
Sbjct: 166 PKELPDLAKVPISSIACGNNHVLALSRSGRVYTWGDGVQYQLGRKILSRRITSGLRPEPL 225
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE---GKLDLVVHDPHPMSWS 134
+V +SAG HS A G +YAWG N Q G+ G VH P P+
Sbjct: 226 HLRD---IVLVSAGSHHSFAVNSGGIVYAWGLNQMHQTGISDDVGGAQSHVHTPTPVRAL 282
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
V+ +A G H+L L + +WGCG ++ +L +
Sbjct: 283 HPDLHLGAHVIQIAAGEHHSLFLLSNGEVWGCGRADHGRLGL 324
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 9/181 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG--VVQI 88
+ +A G H L L G+V+S+G LG + G E + L V +
Sbjct: 64 IEQVAAGGMHSLVLDSNGMVWSFGVNDDMALGRVTDGLHREAEEATPGLVPRLDDRVAFV 123
Query: 89 SAGGWHSAARTQDGFLYAWG-WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+AG S A + +G +YAWG +N+ G +G +G ++ H + E D + + +
Sbjct: 124 AAGDCLSIALSAEGKVYAWGTFNSDGLLGFDG---VIGHPKKVLQPKELPDLAKVPISSI 180
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV-PEHVKNCPIVKLFAE 206
ACG+ H LAL ++ W + Q +G + + + L P H+++ +V +
Sbjct: 181 ACGNNHVLALSRSGRVY--TWGDGVQYQLGRKILSRRITSGLRPEPLHLRDIVLVSAGSH 238
Query: 207 H 207
H
Sbjct: 239 H 239
>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
Length = 791
Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IA G H LALT +G VF+WG+ GQLG P N +P ++ V QISA
Sbjct: 147 IVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVN-KPTKVHIPEP--VKQISA 203
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HS T+ G +Y G + G++G++ V P M V VACG
Sbjct: 204 GYYHSTFLTESGLVYVCGESESGKLGIDASFSTQVA-PKQMQLPS-------PAVHVACG 255
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
HT+ L ++ +L+ G N QL +G +S++ +
Sbjct: 256 GHHTVILAENGNLYCTGSNSSGQLGLGTNLSELHI 290
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+ G+ H LT+ G+V+ G G+LG +S + + P++++ S V ++
Sbjct: 198 VKQISAGYYHSTFLTESGLVYVCGESESGKLGIDASFS-TQVAPKQMQLPSP--AVHVAC 254
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ ++G LY G N+ GQ+G+ L +H P + +N + ++CG
Sbjct: 255 GGHHTVILAENGNLYCTGSNSSGQLGLGTNLS-ELHIPKLLPRGM---LRNETITRISCG 310
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
HT + + L+ CG + +L +
Sbjct: 311 ESHTAVVTESGKLYTCGDGRHGKLGL 336
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I CG +H + Q G +F +G+ GQLG + +P ++AL V ++
Sbjct: 38 VLSITCGDEHSAVICQTGRLFVFGSNDWGQLGLGHKNHIS--KPSCVKALKPERVTHVAC 95
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLVVHDPHPMSWSEDFDS--QNIKVVDV 147
G H+ T ++A G + GQ+G + V+ P + +DS K+V +
Sbjct: 96 GRAHTLICTGSQKIFACGSDQEGQLGRGISAIGDSVNTPVLV-----YDSGLSGSKIVQI 150
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
A GS H+LAL D ++ G N QL + V+ T++ +PE VK
Sbjct: 151 AAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEPVK 199
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PREIRALSGLGVVQISA 90
+ACG H + L + G ++ G+ S GQLG ++ ++ ++ PR + L + +IS
Sbjct: 252 VACGGHHTVILAENGNLYCTGSNSSGQLGLGTNLSELHIPKLLPRGM--LRNETITRISC 309
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+A T+ G LY G G++G+E + V H +++ + + + + V DVACG
Sbjct: 310 GESHTAVVTESGKLYTCGDGRHGKLGLEENENNV----HELTFVQRY--KELFVSDVACG 363
Query: 151 SRHTL 155
HT+
Sbjct: 364 GCHTI 368
>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1379
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 90/176 (51%), Gaps = 22/176 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA GF H LA+ Q+G V+SWG + GQLG + T ++ P +++ L+G V ISA
Sbjct: 1029 VAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGT--TAQSLTPVQVQGLTG--VTAISA 1084
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVAC 149
G H+ A +DG ++AWG N+ GQ+G +G H P+ Q + V+ +A
Sbjct: 1085 GDAHTVALRRDGTVWAWGRNSWGQLG-DGT---TTHRATPV------QVQGLTGVIAIAA 1134
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
GS HT+AL D ++W G N + QL G T + P V+ V A
Sbjct: 1135 GSLHTVALRQDGTVWAWGRNSWGQLGDGT-------TTHRATPVQVQGLTGVIAIA 1183
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 90/176 (51%), Gaps = 22/176 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
VT I+ G H +AL ++G V++WG S GQLG + T P +++ L+G V+ I+A
Sbjct: 1079 VTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGT--TTHRATPVQVQGLTG--VIAIAA 1134
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVAC 149
G H+ A QDG ++AWG N+ GQ+G +G H P+ Q + V+ +A
Sbjct: 1135 GSLHTVALRQDGTVWAWGRNSWGQLG-DGT---TTHRATPV------QVQGLTGVIAIAA 1184
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
GS HT+AL D ++W G+N+ QL G TR P V+ V A
Sbjct: 1185 GSLHTVALRQDGTVWAWGFNDLGQLGDGT-------TTRRLTPAQVQGLTGVTTIA 1233
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H P + +T IA +A+ Q+G V++WG+ +RGQLG + T + P ++
Sbjct: 462 HTPGEVQGLEG--ITAIAASNLLTVAVRQDGTVWAWGDNARGQLGDGT--TTRRLTPVQV 517
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L+G V ++A +H A QDG ++AWG VG G+L D M S
Sbjct: 518 QGLAG--VTAVAASDYHLVAVRQDGTVWAWG------VGFWGQLG----DGTGMDRSTPV 565
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
Q + V +A GS HT+AL D ++W G+N Y QL G
Sbjct: 566 QVQGLTGVTAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGT 607
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 87/180 (48%), Gaps = 27/180 (15%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
L GPL +P ++ +D VT +A G H A Q+G +++WG S GQLG
Sbjct: 906 QLGGGPLSY----RLLPVQVQGLMD--VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGG 959
Query: 64 -PSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD 122
P S + P +++ L + V ++AGG+H AA QDG L+ WG N+ GQ+G
Sbjct: 960 GPLS---YRLLPVQVQGL--MSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLG------ 1008
Query: 123 LVVHDPHPMSWSEDFDSQNIK----VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
P+S S ++ V +A G HTLA+ D ++W G N Y QL G
Sbjct: 1009 -----GGPLSQSLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGT 1063
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
VT +A H +A+ Q+G V++WG G GQLG +G D + P +++ L+G V I+A
Sbjct: 523 VTAVAASDYHLVAVRQDGTVWAWGVGFWGQLG-DGTGMDRS-TPVQVQGLTG--VTAIAA 578
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
G H+ A QDG ++AWG+NN GQ+G G L V P V +
Sbjct: 579 GSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHL-TPVQVPGVTG-----------AVAI 626
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
A G HT+AL D ++W G+N + QL G
Sbjct: 627 AAGGSHTVALLQDGTVWTWGYNIWGQLGDGT 657
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
L GPL +P ++ T IA G H +A+ Q+G V++WG+ GQLG
Sbjct: 802 QLGGGPLSY----RLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGD 857
Query: 64 PSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
+ T ++ P +++ + V ++AGG+H AA QDG L+ WG N+ GQ+G G L
Sbjct: 858 GT--TAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLG-GGPLS- 913
Query: 124 VVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ P+ D V +A G H A D +LW G N Y QL G
Sbjct: 914 --YRLLPVQVQGLMD-----VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGG 960
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 77/153 (50%), Gaps = 16/153 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
VT IA H +AL Q+G +++WGN S GQLG + T P +++ L+G V I+A
Sbjct: 323 VTAIAASGIHTVALRQDGTLWAWGNNSSGQLGDGT--TTVRFTPVQVQGLTG--VTAIAA 378
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVAC 149
G ++ A QDG ++AWG N GQ+G D Q + V +A
Sbjct: 379 GYLYTVASKQDGTVWAWGDNEWGQLG----------DGTTTRRLTPVQVQGLTGVTAIAA 428
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
G +T+A D ++W G N+ +QL G VSQ
Sbjct: 429 GYLYTVASKQDGTVWAWGDNKRSQLGEGA-VSQ 460
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+ +AL Q+G V++WGN S GQLG + T P ++ L+G V I+A
Sbjct: 223 VIAISANDSETVALRQDGTVWAWGNNSSGQLGDGT--TTVRFTPVQVLGLTG--VTAIAA 278
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG + A QDG L+AWG N+ GQ+G + S+ + V +A
Sbjct: 279 GGGFAVALRQDGTLWAWGSNSRGQLG---------NGTTFGSYRPEQVQGLTGVTAIAAS 329
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGC 178
HT+AL D +LW G N QL G
Sbjct: 330 GIHTVALRQDGTLWAWGNNSSGQLGDGT 357
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA G H +AL Q+G V++WG GQLG + T + P +++ L+G V I+A
Sbjct: 1179 VIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGT--TTRRLTPAQVQGLTG--VTTIAA 1234
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VAC 149
G +H+AA QDG + WG+N GQ+G D D + Q + V +A
Sbjct: 1235 GYFHTAAVRQDGTAWTWGFNLWGQLG-----DGTFTDR-----ATPVQVQGLTGVSALAA 1284
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
G HT+ + +D ++W G N QL G
Sbjct: 1285 GYAHTVVVGEDGTVWAWGNNSGTQLGNGS 1313
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
VT +A G +H AL Q G V++WG+ GQLG +S + P +++ L+ GV+ ISA
Sbjct: 173 VTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTS--TQRLTPVQVQGLT--GVIAISA 228
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
+ A QDG ++AWG N+ GQ+G +G + + + V +A G
Sbjct: 229 NDSETVALRQDGTVWAWGNNSSGQLG-DGTTTVRFTPVQVLGLT--------GVTAIAAG 279
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
+AL D +LW G N QL G PE V+ V A
Sbjct: 280 GGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYR-------PEQVQGLTGVTAIA 327
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG 91
T IA G H +A +Q+G V++WG S GQLG +S P +++ L+ GV ++AG
Sbjct: 124 TAIAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTS--IQRFSPVQVQGLT--GVTAVAAG 179
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACG 150
HSAA Q G ++ WG N GQ+G D Q + V+ ++
Sbjct: 180 RNHSAALGQGGTVWTWGDNLVGQLG----------DGTSTQRLTPVQVQGLTGVIAISAN 229
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGC 178
T+AL D ++W G N QL G
Sbjct: 230 DSETVALRQDGTVWAWGNNSSGQLGDGT 257
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
+H LA+ Q+G V++WGN GQLG + T P ++ G I+AG +H+ A
Sbjct: 83 NHTLAVRQDGTVWAWGNNDDGQLGDGT--TTRRFSPVQVMT----GATAIAAGIYHTVAA 136
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSRHTLAL 157
+QDG ++ WG N+ GQ+G D + Q + V VA G H+ AL
Sbjct: 137 SQDGTVWTWGRNSSGQLG----------DGTSIQRFSPVQVQGLTGVTAVAAGRNHSAAL 186
Query: 158 CDDNSLWGCGWNEYNQLSMGCGVSQVS 184
++W G N QL G +++
Sbjct: 187 GQGGTVWTWGDNLVGQLGDGTSTQRLT 213
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H P ++ D++ IA H +A+ Q+G V++WG S GQLG + T + P ++
Sbjct: 662 HSPVQVQGLADVIA--IATNNGHTVAVRQDGTVWTWGLNSSGQLGDGT--TTQRLTPVQV 717
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ + S+ + A QD L+AWG N+ GQ+G +G P+
Sbjct: 718 HGLTDATAILTSSS--QTVAMRQDRTLWAWGDNHWGQLG-DGT---TTRRLTPVQVQGLM 771
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D V +A G H A D +LW G N Y QL G
Sbjct: 772 D-----VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGG 806
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 24/174 (13%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G H +AL Q+G V++WG GQLG + T P +++ L+ V+ I+
Sbjct: 626 IAAGGSHTVALLQDGTVWTWGYNIWGQLGDGT--TTHRHSPVQVQGLAD--VIAIATNNG 681
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLD--LVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
H+ A QDG ++ WG N+ GQ+G +G L H ++ + S
Sbjct: 682 HTVAVRQDGTVWTWGLNSSGQLG-DGTTTQRLTPVQVHGLT----------DATAILTSS 730
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
T+A+ D +LW G N + QL G TR P V+ V A
Sbjct: 731 SQTVAMRQDRTLWAWGDNHWGQLGDGT-------TTRRLTPVQVQGLMDVTAMA 777
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V+ +A G+ H + + ++G V++WGN S QLG SS TD + P ++ AL+ G ++A
Sbjct: 1279 VSALAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSS-TDRS-TPVQVEALT--GAFSLAA 1334
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVG 116
G +H+ A + DG + WG NN GQVG
Sbjct: 1335 GRFHTVAMSPDGAGWGWGRNNLGQVG 1360
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 76/191 (39%), Gaps = 49/191 (25%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG 91
T I +A+ Q+ +++WG+ GQLG + T + P +++ L + V ++AG
Sbjct: 724 TAILTSSSQTVAMRQDRTLWAWGDNHWGQLGDGT--TTRRLTPVQVQGL--MDVTAMAAG 779
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVG------------VEGKLD--------------LVV 125
G+H AA QDG L+ WG N+ GQ+G V+G V
Sbjct: 780 GYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVR 839
Query: 126 HDPHPMSWSEDFDSQ-------------------NIKVVDVACGSRHTLALCDDNSLWGC 166
D +W +F Q + V +A G H A D +LW
Sbjct: 840 QDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTW 899
Query: 167 GWNEYNQLSMG 177
G N Y QL G
Sbjct: 900 GLNSYGQLGGG 910
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + + ++CG DHCLAL +G +F+WG + GQLG +G + P++++
Sbjct: 127 IPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGL-GNGFISQSSPQKVK 185
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP---HPMSWSE 135
+L G+ + Q++AGG HS A + G ++ WG N+ GQ+G+ + V P P+
Sbjct: 186 SLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLND--EQVKETPCHVKPL---- 239
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ KVV ++CG HT L L+ G QL
Sbjct: 240 ----RTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQL 274
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 92/193 (47%), Gaps = 21/193 (10%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V ++ACG H L L ++G V+S G GQLG+ GT P + L+ +
Sbjct: 32 LATCVKEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGT----HPAPVATLAEEHIK 87
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
I+ G HS A + G LY+WG N GQ+G V H + Q I+
Sbjct: 88 HIACGQSHSLALSLQGNLYSWGAGNDGQLGHAT----VEHYSRIPRIIKKLSQQKIQ--Q 141
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG-VSQVSVMTRLSVPEHVKN---CPIVK 202
++CG H LAL DD L+ G N + QL +G G +SQ S P+ VK+ P+ +
Sbjct: 142 MSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQ-------SSPQKVKSLEGIPLAQ 194
Query: 203 LFAEHWNSARLSV 215
+ A +S LS+
Sbjct: 195 VTAGGSHSFALSL 207
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IACG H LAL+ +G ++SWG G+ GQLG+ + + + PR I+ LS + Q+S
Sbjct: 86 IKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRI-PRIIKKLSQQKIQQMSC 144
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H A DG L+ WG N GQ+G+ G + P + E I + V G
Sbjct: 145 GDDHCLALGDDGQLFTWGQNTHGQLGL-GNGFISQSSPQKVKSLE-----GIPLAQVTAG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
H+ AL +++G G N QL G QV P HVK
Sbjct: 199 GSHSFALSLSGAVFGWGKNSAGQL--GLNDEQVK-----ETPCHVK 237
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 29/215 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + + + G H AL+ G VF WG S GQLG + P ++
Sbjct: 181 PQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGL--NDEQVKETPCHVKP 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G L+ +G GQ+G D + ++ +P E S
Sbjct: 239 LRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLG----HDSLHNEINPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+ V +ACG +HTLA + +L+ G + QL G E+ C
Sbjct: 295 E---VSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLGTG--------------HENNVKC 337
Query: 199 PIVKLFAEHWNSARLSVPEHAKDSS--IVK-LFAG 230
P V W S +P HA ++ IVK +F+G
Sbjct: 338 PTV--VKGKWASCSGQIPMHADCAAYNIVKQIFSG 370
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
QV P + V I+CG +H LT+ G +F++G G GQLG+ S + N P
Sbjct: 228 QVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEIN--P 285
Query: 75 REIRALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
R + L G V QI+ G H+ A G LYA+G + GQ+G
Sbjct: 286 RRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLGT 329
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+ WG+ + GQLG S +A EP V +++ GG H+ +DG +Y+ GW
Sbjct: 1 MLCWGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGW 60
Query: 110 NNGGQVG--VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WG 165
N GQ+G EG P P++ ++IK +ACG H+LAL +L WG
Sbjct: 61 NGEGQLGHSHEGT------HPAPVA---TLAEEHIK--HIACGQSHSLALSLQGNLYSWG 109
Query: 166 CG 167
G
Sbjct: 110 AG 111
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ WG + GQ+G L V +P ++S V +VACG +HTL L +D +
Sbjct: 1 MLCWGHSAFGQLGNGHSLKNAVSEPCACTFS-----LATCVKEVACGGKHTLFLMEDGQV 55
Query: 164 WGCGWNEYNQL 174
+ CGWN QL
Sbjct: 56 YSCGWNGEGQL 66
>gi|392575264|gb|EIW68398.1| hypothetical protein TREMEDRAFT_32149 [Tremella mesenterica DSM
1558]
Length = 595
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P + + +T ++CG DH LAL G V+ WGNG + QLG +E R++
Sbjct: 265 YHPISLPSLAKIKITSVSCGADHVLALAITGHVYVWGNGQQNQLGR------RIIERRKL 318
Query: 78 RALS----GL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPH 129
L GL G+V +SAG +HS A DG ++AWG N Q G+ +G + +++ P
Sbjct: 319 NGLEPERLGLRGIVHVSAGMYHSFAVGTDGTVWAWGLNTFHQTGISSQKGGEEEMINQPT 378
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + KVV ++ G H+L L + + GCG + N+L +G
Sbjct: 379 IVDALSPNNLGGAKVVSISGGEHHSLFLLSNGDVLGCGRCDANELGLG 426
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGY----------PSS---GTDANMEPREIRAL 80
+ACG H LA+ + G V SWG LG P S D P + +L
Sbjct: 154 VACGGMHTLAIDEAGRVRSWGINDNAALGRITTDVKDPNDPESVIPNEDLETYPFVVESL 213
Query: 81 --SGLGVVQISAGGWHSAARTQDGFLYAWG--WNNGGQVGVEGKLDLVVHDPHPMSWSED 136
G VQ++AG S A + G L AWG +N G +G +G + HP+S
Sbjct: 214 EKEGFRAVQVAAGDSVSVAVSDKGELRAWGSFRSNDGILGFDGVPNHSPFQYHPISLP-- 271
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
IK+ V+CG+ H LAL ++ G + NQL
Sbjct: 272 -SLAKIKITSVSCGADHVLALAITGHVYVWGNGQQNQL 308
>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
guttata]
Length = 537
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 12/167 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI-RALSGLGVVQI 88
V ++ACG H +AL+ +G +++WG + GQ+G SG+ AN PR + L G VV I
Sbjct: 136 VVEVACGSHHSMALSMDGDLYAWGYNNCGQVG---SGSTANQPTPRRVSNCLQGKIVVGI 192
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ ++ + ++ ++ V+ +A
Sbjct: 193 ACGQTSSMAVVNNGEVYGWGYNGNGQLGLG-------NNGNQLTPCRVAALHSVCVLQIA 245
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
CG HTLAL D+ L+ G N Y QL G +Q+S + + E V
Sbjct: 246 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQIMMEKERV 292
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +++ ++ ++ G H + T++G V++WG+ QLG + T+ + P ++
Sbjct: 70 VPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLG--NGTTNQGITPVQV 127
Query: 78 -RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L VV+++ G HS A + DG LYAWG+NN GQVG + P P S
Sbjct: 128 CTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGS----TANQPTPRRVSNC 183
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
Q VV +ACG ++A+ ++ ++G G+N QL +G +Q++
Sbjct: 184 L--QGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLT 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 12/139 (8%)
Query: 20 PSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ + L +V IACG +A+ G V+ WG GQLG ++G + P +
Sbjct: 177 PRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQ--LTPCRVA 234
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL + V+QI+ G H+ A T +G LYAWG N GQ+G K + + P + ++
Sbjct: 235 ALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQL--SPVQIMMEKE-- 290
Query: 139 SQNIKVVDV-ACGSRHTLA 156
+VV++ AC S HT A
Sbjct: 291 ----RVVEIAACHSAHTSA 305
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ + V IACG+ H LALT EG++++WG + GQLG +G +N + P +I
Sbjct: 230 PCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPVQIM 286
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ VV+I+A SAA+TQ G +Y WG G V
Sbjct: 287 -MEKERVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSV 324
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 24/190 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ F + + DI+CG H A+ G +++WG+G G+LG+ ++ T ++P+ ++A
Sbjct: 559 PRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHT--LLKPKPVQA 616
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LSG VVQ++ G + TQDG +Y+WG + G++G G V P P+ E
Sbjct: 617 LSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCV--PKPV---ERL 671
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
Q+ VV + CG++ +LAL +W G +Y +L G +HV+
Sbjct: 672 SGQD--VVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSD-------------QHVRR 716
Query: 198 CPIVKLFAEH 207
+V+ EH
Sbjct: 717 PQVVEGLREH 726
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 23/178 (12%)
Query: 19 MPSRMDHFLDLVVTDIA--CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ ++ + +T ++ G H LAL+ EG V+SWG G G+LG+ G ++++ PR
Sbjct: 1482 IPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGH---GNRSSLDHPR 1538
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I +L G +V+++ GG HSAA G LY WG G++G E D + P ++ +
Sbjct: 1539 IIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL--KPKLVNALK 1596
Query: 136 DFDSQNIKVVDVACGSRHTLALC------DDNSLWGCGWNEYNQL----SMGCGVSQV 183
D N+ VVDVACG+ LC + +W G +Y +L S GC V +
Sbjct: 1597 D----NL-VVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAI 1649
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P+ +D + +T +ACG LAL++ G V++WG G +LG+ G+D ++ P+ I
Sbjct: 1646 VPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGH---GSDEHVRRPKLI 1702
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L G+ VV++S G H A +G +Y WG N+ GQ+G +G P ++
Sbjct: 1703 ESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIG-DGTTQ-ATQIPRLVAA---- 1756
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q + V+CGS HT+A
Sbjct: 1757 -LQGHHISHVSCGSAHTVA 1774
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ G H +ALT +G V+SWG+G G+LG+ S DA + PR+I + IS G
Sbjct: 521 VHSGGRHAMALTYDGHVYSWGDGEEGKLGH-GSRADA-LTPRKIETFPEKCIRDISCGSS 578
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR- 152
HSAA G LY WG G++G L+ P P+ + Q +VV VACGSR
Sbjct: 579 HSAAIGSSGTLYTWGHGMYGRLGHGNNHTLL--KPKPV---QALSGQ--QVVQVACGSRD 631
Query: 153 -HTLALCDDNSLWGCGWNEYNQLSMG 177
TL L D ++ G ++ +L G
Sbjct: 632 AQTLCLTQDGLVYSWGDGDFGKLGRG 657
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG L LTQ+G+V+SWG+G G+LG G+D P+ + LSG VV+I
Sbjct: 622 VVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLG--RGGSDGCCVPKPVERLSGQDVVKI 679
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A ++ G ++ WG + ++G D V P + + KVVDVA
Sbjct: 680 ECGAQFSLALSRCGLVWTWGKGDYFRLGHGS--DQHVRRPQVVEGLREH-----KVVDVA 732
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H LA+ + ++ G N++ Q G
Sbjct: 733 VGALHCLAVTEGGQVFAWGDNDHGQQGNG 761
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P ++ V I CG LAL++ G+V++WG G +LG+ G+D ++ P+ +
Sbjct: 664 VPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGH---GSDQHVRRPQVV 720
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L VV ++ G H A T+ G ++AWG N+ GQ G G V P + E
Sbjct: 721 EGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGT--TVNRKPMKVQGLE-- 776
Query: 138 DSQNIKVVDVACGSRHTLALCD 159
+K+ +ACGS H++A D
Sbjct: 777 ---GVKITKLACGSSHSIAFAD 795
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQ----EGIVFSWGNGSRGQLGYPSSGTDANME 73
P ++ D +V D+ACG L +T+ +V+SWG+G G+LG G+D
Sbjct: 1589 PKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG--RGGSDGCKV 1646
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P I L G + ++ G S A ++ G +Y WG + ++G D V P +
Sbjct: 1647 PAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGS--DEHVRRPKLIE- 1703
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ +KVV+V+ GS H +A D+ ++ G N+ Q+ G G +Q + + RL
Sbjct: 1704 ----SLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQI--GDGTTQATQIPRL 1753
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANME----PREIRALSGL 83
L VT + G A+T G V++ G + G+LG P +G+ + + P+ I+ L+
Sbjct: 463 LKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLA-- 520
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
+ +GG H+ A T DG +Y+WG G++G + D + P + E F + I+
Sbjct: 521 ----VHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALT--PRKI---ETFPEKCIR 571
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D++CGS H+ A+ +L+ G Y +L G
Sbjct: 572 --DISCGSSHSAAIGSSGTLYTWGHGMYGRLGHG 603
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G +F WG+ RGQLG P G + P +L+ L +Q+ G T +G ++A
Sbjct: 1407 GSIFGWGHNHRGQLGGP-EGAKVKI-PIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFAT 1464
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WG 165
G+ GG++G+ + + + E +I V V G +H LAL ++ + WG
Sbjct: 1465 GYGAGGRLGIGSNESVAIP-----TLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWG 1519
Query: 166 CG 167
G
Sbjct: 1520 EG 1521
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 24/190 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ F + + DI+CG H A+ G +++WG+G G+LG+ ++ T ++P+ ++A
Sbjct: 558 PRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHT--LLKPKPVQA 615
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LSG VVQ++ G + TQDG +Y+WG + G++G G V P P+ E
Sbjct: 616 LSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCV--PKPV---ERL 670
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
Q+ VV + CG++ +LAL +W G +Y +L G +HV+
Sbjct: 671 SGQD--VVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSD-------------QHVRR 715
Query: 198 CPIVKLFAEH 207
+V+ EH
Sbjct: 716 PQVVEGLREH 725
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 23/178 (12%)
Query: 19 MPSRMDHFLDLVVTDIA--CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ ++ + +T ++ G H LAL+ EG V+SWG G G+LG+ G ++++ PR
Sbjct: 1481 IPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGH---GNRSSLDHPR 1537
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I +L G +V+++ GG HSAA G LY WG G++G E D + P ++ +
Sbjct: 1538 IIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL--KPKLVNALK 1595
Query: 136 DFDSQNIKVVDVACGSRHTLALC------DDNSLWGCGWNEYNQL----SMGCGVSQV 183
D N+ VVDVACG+ LC + +W G +Y +L S GC V +
Sbjct: 1596 D----NL-VVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAI 1648
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P+ +D + +T +ACG LAL++ G V++WG G +LG+ G+D ++ P+ I
Sbjct: 1645 VPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGH---GSDEHVRRPKLI 1701
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L G+ VV++S G H A +G +Y WG N+ GQ+G +G P ++
Sbjct: 1702 ESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIG-DGTTQ-ATQIPRLVAA---- 1755
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q + V+CGS HT+A
Sbjct: 1756 -LQGHHISHVSCGSAHTVA 1773
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ G H +ALT +G V+SWG+G G+LG+ S DA + PR+I + IS G
Sbjct: 520 VHSGGRHAMALTYDGHVYSWGDGEEGKLGH-GSRADA-LTPRKIETFPEKCIRDISCGSS 577
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR- 152
HSAA G LY WG G++G L+ P P+ + Q +VV VACGSR
Sbjct: 578 HSAAIGSSGTLYTWGHGMYGRLGHGNNHTLL--KPKPV---QALSGQ--QVVQVACGSRD 630
Query: 153 -HTLALCDDNSLWGCGWNEYNQLSMG 177
TL L D ++ G ++ +L G
Sbjct: 631 AQTLCLTQDGLVYSWGDGDFGKLGRG 656
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG L LTQ+G+V+SWG+G G+LG G+D P+ + LSG VV+I
Sbjct: 621 VVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLG--RGGSDGCCVPKPVERLSGQDVVKI 678
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A ++ G ++ WG + ++G D V P + + KVVDVA
Sbjct: 679 ECGAQFSLALSRCGLVWTWGKGDYFRLGHGS--DQHVRRPQVVEGLREH-----KVVDVA 731
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H LA+ + ++ G N++ Q G
Sbjct: 732 VGALHCLAVTEGGQVFAWGDNDHGQQGNG 760
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P ++ V I CG LAL++ G+V++WG G +LG+ G+D ++ P+ +
Sbjct: 663 VPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGH---GSDQHVRRPQVV 719
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L VV ++ G H A T+ G ++AWG N+ GQ G G V P + E
Sbjct: 720 EGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGT--TVNRKPMKVQGLE-- 775
Query: 138 DSQNIKVVDVACGSRHTLALCD 159
+K+ +ACGS H++A D
Sbjct: 776 ---GVKITKLACGSSHSIAFAD 794
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQ----EGIVFSWGNGSRGQLGYPSSGTDANME 73
P ++ D +V D+ACG L +T+ +V+SWG+G G+LG G+D
Sbjct: 1588 PKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG--RGGSDGCKV 1645
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P I L G + ++ G S A ++ G +Y WG + ++G D V P +
Sbjct: 1646 PAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGS--DEHVRRPKLIE- 1702
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ +KVV+V+ GS H +A D+ ++ G N+ Q+ G G +Q + + RL
Sbjct: 1703 ----SLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQI--GDGTTQATQIPRL 1752
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANME----PREIRALSGL 83
L VT + G A+T G V++ G + G+LG P +G+ + + P+ I+ L+
Sbjct: 462 LKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLA-- 519
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
+ +GG H+ A T DG +Y+WG G++G + D + P + E F + I+
Sbjct: 520 ----VHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALT--PRKI---ETFPEKCIR 570
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D++CGS H+ A+ +L+ G Y +L G
Sbjct: 571 --DISCGSSHSAAIGSSGTLYTWGHGMYGRLGHG 602
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G +F WG+ RGQLG P G + P +L+ L +Q+ G T +G ++A
Sbjct: 1406 GSIFGWGHNHRGQLGGP-EGAKVKI-PIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFAT 1463
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WG 165
G+ GG++G+ + + + E +I V V G +H LAL ++ + WG
Sbjct: 1464 GYGAGGRLGIGSNESVAI-----PTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWG 1518
Query: 166 CG 167
G
Sbjct: 1519 EG 1520
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L V+ I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVMNI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R++ + ++ G H + T +G VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLNSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN V+++ACG ++A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG P +
Sbjct: 194 IPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSAHTSA 323
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 35 ACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
AC F + L T + +F G G LG + +EPR + +L+G + +S
Sbjct: 48 ACVFGSAGNEVLYTTVDDEIFVLGTNCSGCLGI--GDIQSTIEPRRLNSLTGKKIASLSY 105
Query: 91 G-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G G H T DG ++ WG N Q+G G + H P S + N +V++VAC
Sbjct: 106 GSGPHIVLATTDGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NKQVIEVAC 159
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
GS H+L L D ++ G+N Q+ G +Q +P V C
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-------PIPRRVTGC 201
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVV 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 342
>gi|340721977|ref|XP_003399389.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like isoform 2
[Bombus terrestris]
Length = 506
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 12/150 (8%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + DIACG H LALT EG V++WG + GQ+G S + N + L+G V+
Sbjct: 104 DEFIVDIACGSHHSLALTNEGKVYAWGENTCGQVG-KSVNINENTPMKVNSTLAGKTVIC 162
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
IS G S T G +Y WG N+ GQ+G+ ++ V DP ++ + +
Sbjct: 163 ISCGQSSSMTVTDTGKVYGWGCNDVGQLGIGNYVNQV--DPCEVT---------TLIEKI 211
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG H LAL + +L+ G N Y QL +G
Sbjct: 212 VCGYAHVLALSNKGALYVWGGNNYGQLGLG 241
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 81/145 (55%), Gaps = 10/145 (6%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RALSGLGVVQISAGGWHSAAR 98
H LALT+EG V+SWG+ S G+LG S+ +M P + + L+ +V I+ G HS A
Sbjct: 64 HVLALTEEGKVYSWGHNSHGELGNCSTN---HMIPMPVTKNLNDEFIVDIACGSHHSLAL 120
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T +G +YAWG N GQVG + +++ PM + + V+ ++CG ++ +
Sbjct: 121 TNEGKVYAWGENTCGQVGK----SVNINENTPMKVNSTLAGKT--VICISCGQSSSMTVT 174
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQV 183
D ++G G N+ QL +G V+QV
Sbjct: 175 DTGKVYGWGCNDVGQLGIGNYVNQV 199
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQISAG-GWHSA 96
+ L +T++ IV++ G+ + G LG +G N P+++ AL G + + G G H
Sbjct: 10 NEALIITRDKIVYALGSNTSGCLG---TGDACNTFYPKKVEALCGKNIKTFAYGKGPHVL 66
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
A T++G +Y+WG N+ G++G + + PM +++ + + I VD+ACGS H+LA
Sbjct: 67 ALTEEGKVYSWGHNSHGELG-----NCSTNHMIPMPVTKNLNDEFI--VDIACGSHHSLA 119
Query: 157 LCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
L ++ ++ G N Q+ +++ + M
Sbjct: 120 LTNEGKVYAWGENTCGQVGKSVNINENTPM 149
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G V++WG + GQ+G SG+ AN PR + + L I
Sbjct: 324 VVEVACGSHHSLVLTSDGEVYAWGYNNSGQVG---SGSTANQPIPRRVTSCLQNKIATNI 380
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A + G +Y WG+N GQ+G L + P P + Q I+V V
Sbjct: 381 ACGQMCSMAVVESGEVYVWGYNGNGQLG----LGSSGNQPTPCRIAA---LQGIRVQRVT 433
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ L+ G N Y QL G +Q +P V+ I+++ A H
Sbjct: 434 CGYAHTLVLTDEGQLYAWGANSYGQLGTGNKSNQ-----SYPIPVPVEKDRIIEIAACH 487
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + + T+IACG +A+ + G V+ WG GQLG SSG P I
Sbjct: 364 IPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPT--PCRI 421
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G LYAWG N+ GQ+G K + P P+
Sbjct: 422 AALQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKSNQSYPIPVPV------ 475
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+ +++++ AC S HT A
Sbjct: 476 --EKDRIIEIAACHSAHTSA 493
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D +T ++ G H + T EG V++WG+ + QLG + T+ + P +
Sbjct: 259 PRRIDSLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLG--NGTTNHGLIPCHVS 316
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L VV+++ G HS T DG +YAWG+NN GQVG + P P +
Sbjct: 317 TNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGS----TANQPIPRRVTSCL 372
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN ++ACG ++A+ + ++ G+N QL +G
Sbjct: 373 --QNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLG 410
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V + CG+ H L LT EG +++WG S GQLG +G +N
Sbjct: 418 PCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLG---TGNKSNQSYPIPVP 474
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 475 VEKDRIIEIAACHSAHTSAAKTQSGHVYMWGQCRGQSV 512
>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
Length = 1175
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +D + I CG+ H + LT +G V+S G QLG+ SG + ++
Sbjct: 32 IPKALDVRNLPTLIQITCGYTHTVFLTIDGEVYSCGCNEFQQLGHGQSGG----QLAKVV 87
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL ++ ++ G +H+AA T +G L+ WG N+ GQ+G EG D V +S
Sbjct: 88 ALEHYRIISVACGAYHNAAITYNGLLFTWGCNSNGQLGREGD-DTGVKLVRALS------ 140
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV--- 195
+ KVV V+ G HTL L D ++ G N QL +G Q +S+P+ +
Sbjct: 141 --DHKVVQVSLGVEHTLVLTDTARVFAFGSNLKGQLGLGYSSEQ-----SVSIPQQILCL 193
Query: 196 KNCPIVKLFAEHWNSARLSV 215
P+ ++ A W+S L+V
Sbjct: 194 SGLPVRRIVAGGWHSFVLTV 213
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 89/194 (45%), Gaps = 35/194 (18%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ G +H L LT VF++G+ +GQLG S + P++I LSGL V +I A
Sbjct: 144 VVQVSLGVEHTLVLTDTARVFAFGSNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVA 203
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGV----------EGKLDLV--------VHDPH--- 129
GGWHS T G LYAWG NN GQ+G+ + +L L V D
Sbjct: 204 GGWHSFVLTVSGSLYAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKN 263
Query: 130 -PMSWSEDFDSQNI------------KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
P S D N+ +VV +ACG HT+AL D ++ G Y QL
Sbjct: 264 RPFS-PLDTSLSNVSIPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGH 322
Query: 177 GCGVSQVSVMTRLS 190
+SV +++
Sbjct: 323 NESTIGISVPRKIT 336
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG H A+T G++F+WG S GQLG T + +RALS VVQ+S
Sbjct: 94 IISVACGAYHNAAITYNGLLFTWGCNSNGQLGREGDDTGVKL----VRALSDHKVVQVSL 149
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+ T ++A+G N GQ+G+ + V P + + V + G
Sbjct: 150 GVEHTLVLTDTARVFAFGSNLKGQLGLGYSSEQSVSIPQQI-----LCLSGLPVRRIVAG 204
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ L SL+ G N Y QL +
Sbjct: 205 GWHSFVLTVSGSLYAWGSNNYGQLGL 230
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG H +ALT++G VF++G G GQLG+ S ++ PR+I G V QI+
Sbjct: 290 VVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISV-PRKITEFMGNVVTQIAC 348
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G +H+ A + G L+A+G Q+G+
Sbjct: 349 GRFHTLALVPKTGRLFAFGQGTNAQLGM 376
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 79/203 (38%), Gaps = 47/203 (23%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY----------- 63
Q +P ++ L V I G H LT G +++WG+ + GQLG
Sbjct: 182 QSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSNNYGQLGLSYFGSSPNDHQ 241
Query: 64 -----------------------PSSGTDANME----PREIRALSGLGVVQISAGGWHSA 96
P S D ++ P ++ L G VV ++ G H+
Sbjct: 242 NELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVVYLACGETHTV 301
Query: 97 ARTQDGFLYAWGWNNGGQVG-VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTL 155
A T+DG ++ +G GQ+G E + + V P +E + V +ACG HTL
Sbjct: 302 ALTRDGGVFTFGAGRYGQLGHNESTIGISV----PRKITEFMGN---VVTQIACGRFHTL 354
Query: 156 ALCDDN-SLWGCGWNEYNQLSMG 177
AL L+ G QL MG
Sbjct: 355 ALVPKTGRLFAFGQGTNAQLGMG 377
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI-KVVDVACGSRHTLALCDDNS 162
L+AWG EG+L L +D + + + D +N+ ++ + CG HT+ L D
Sbjct: 9 LFAWGSCE------EGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTIDGE 62
Query: 163 LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
++ CG NE+ QL G Q++ + L EH +
Sbjct: 63 VYSCGCNEFQQLGHGQSGGQLAKVVAL---EHYR 93
>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4588
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 88/170 (51%), Gaps = 13/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+P+ + F VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +
Sbjct: 3751 LFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGH--GNNERQRR 3808
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I AL G VVQ++ G HSA T DG L+ +G G++G + + P ++
Sbjct: 3809 PKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKM--QPERVAA 3866
Query: 134 SEDFDSQNIKVVDVACGSRHTLAL-CDDNSLWGCGWNEYNQLSMGCGVSQ 182
E + V V+CG HTL L D ++W G +Y +L G ++
Sbjct: 3867 LEGY-----HVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAK 3911
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA+T +G VFSWG+G G+LG+ +S T P+ ++ L VV SAG HSAA
Sbjct: 435 HTLAITVDGEVFSWGDGEYGKLGHGNSATQKY--PKIVQGPLFSKIVVSASAGYRHSAAV 492
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS--QNIK-VVDVACGSRHTL 155
T DG LY WG + G++G H S S + + ++I V VACGS HT+
Sbjct: 493 TNDGELYTWGEGDFGRLG------------HSDSQSRNTPTLVKDISGVGQVACGSSHTI 540
Query: 156 ALCDD-NSLWGCGWNEYNQLSMG 177
A+ D ++W G + +L G
Sbjct: 541 AVAQDGRTMWSFGGGDNGKLGHG 563
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +ACG H +A+ Q+G ++S+G G G+LG+ T+ P+ I AL G + ++
Sbjct: 529 VGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGH--GDTNRVYRPKVIEALHGFIIRKVC 586
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G ++AWG G +G G + P + ED K++D++C
Sbjct: 587 AGSQSSLALTSAGQVFAWGC--GSCLGC-GSSETTSLRPR---FVEDLSI--TKIIDISC 638
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
G H LAL +N ++ G N Q CG S T ++ P+ V
Sbjct: 639 GDSHCLALSHENEVYAWGNNTMGQ----CGQGHTS--TPITRPKKV 678
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 24/178 (13%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+V + G+ H A+T +G +++WG G G+LG+ S + + P ++ +SG+G Q++
Sbjct: 478 IVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGH--SDSQSRNTPTLVKDISGVG--QVA 533
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A QDG ++++G + G++G G + V+ P + F + V
Sbjct: 534 CGSSHTIAVAQDGRTMWSFGGGDNGKLG-HGDTNR-VYRPKVIEALHGF-----IIRKVC 586
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLF 204
GS+ +LAL + WGCG +GCG S+ + + P V++ I K+
Sbjct: 587 AGSQSSLALTSAGQVFAWGCGS------CLGCGSSETTSLR----PRFVEDLSITKII 634
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DI+CG HCLAL+ E V++WGN + GQ G + T P+++ L G+ + QI+A
Sbjct: 633 IIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT-RPKKVLGLEGVSIQQITA 691
Query: 91 GGWHSAART---QDGFLYAW 107
G HS A T D L AW
Sbjct: 692 GTSHSLAWTAVPTDRQLVAW 711
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ ++ + G LALT G VF+WG GS LG SS T ++ PR +
Sbjct: 569 YRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGS--CLGCGSSET-TSLRPRFV 625
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS ++ IS G H A + + +YAWG N GQ G +G + P +
Sbjct: 626 EDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCG-QGHTSTPITRPKKV-----L 679
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + + + G+ H+LA
Sbjct: 680 GLEGVSIQQITAGTSHSLA 698
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ V ++CG +H L L+ +G+ V+++G+G G+LG SS A P+++
Sbjct: 3861 PERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS--TAKYYPQKVE 3918
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G+ ++ G S DG +Y +G +G+ + +P + E
Sbjct: 3919 QLCNKGMKKVCCGAQFSVVLATDGHVYTFGQER--LIGLPDSMLKNRSNPQVVPSLE--- 3973
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG-CG-VSQVSVMTRLSVPEHVK 196
+ + D+A G H LAL ++ G N QL +G C V + +++T L K
Sbjct: 3974 --GLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCNLVKEPTLITAL----QGK 4027
Query: 197 NCPIVKLFAEHWNSARLSVPEHAKDSSI 224
N I ++ A +S+ + P +K+S++
Sbjct: 4028 N--IKQISAGRCHSSAWTAPSTSKNSAL 4053
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S + P +++ + + + CG + L +G V+++G +G P S
Sbjct: 3908 STAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQ--ERLIGLPDSMLKNRSN 3965
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
P+ + +L GL + I+ G H A + G +YAWG N+ GQ+G+ G +LV
Sbjct: 3966 PQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGL-GHCNLV 4015
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P + L + DIA G H ALT G V+ WG G G+LG+ + + M
Sbjct: 234 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMV 293
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL------DLVVHD 127
P++++ LSG +VQIS GG HS A T DG ++++G + G++G K+ ++ +
Sbjct: 294 PQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDI 353
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
P P +E+ + VACG RHTLAL
Sbjct: 354 PPPRGRTENG---HWIAKLVACGGRHTLAL 380
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 16/176 (9%)
Query: 9 PLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
P ++Q+ +P R+ LD+V IA G H LAL ++G +++WGN GQLG + T
Sbjct: 180 PPGDITQI-SVPVRV-QGLDMVRL-IAVGAFHNLALQEDGTLWAWGNNEYGQLG--TGDT 234
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVV 125
+P ++ LSGL +V I+AGGWHS A T +G +Y WG G++G + +V
Sbjct: 235 QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVP 294
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
+S E +V ++CG H++A+ D ++ G ++ +L G V+
Sbjct: 295 QKVQLLSGEE--------IVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVT 342
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 48/194 (24%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G + LA+T++G +F+WG RG LG+P+ GT + P +++ALS + +VQ +
Sbjct: 40 VCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPA-GTKSENVPSQVKALSNVKIVQAAI 98
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD---------------------------- 122
GGWH A G YAWG N GQ G E +
Sbjct: 99 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAA 158
Query: 123 ------LVVHDPHPMSWSEDFDSQNIKVVDV-------------ACGSRHTLALCDDNSL 163
++ + H +W + + +I + V A G+ H LAL +D +L
Sbjct: 159 GGTHSVVLTREGHVWTWGQPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTL 218
Query: 164 WGCGWNEYNQLSMG 177
W G NEY QL G
Sbjct: 219 WAWGNNEYGQLGTG 232
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 64/134 (47%), Gaps = 28/134 (20%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPRE----IRALSGLGVVQISAGGWHSAARTQDGFLY 105
+ +WG+G GQLG N E RE I+AL V + AG +S A T+DG L+
Sbjct: 7 IIAWGSGEDGQLGL------GNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLF 60
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPM-SWSEDFDSQ-----NIKVVDVACGSRHTLALCD 159
WGWN G +G HP + SE+ SQ N+K+V A G H LA+ D
Sbjct: 61 TWGWNQRGTLG------------HPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDD 108
Query: 160 DNSLWGCGWNEYNQ 173
+ G NEY Q
Sbjct: 109 QGRAYAWGGNEYGQ 122
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG H +ALT G ++ WG+ S GQLG SSGT +P ++ L G+ + IS
Sbjct: 139 VVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGT-PETKPCLVKLLQGIPISHISC 197
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G S A T G +Y WG N+ GQ+G+ D P P + +V + CG
Sbjct: 198 GADFSFAVTPSGAVYGWGKNSFGQLGLGDTTD----RPQPTQLK---SLRFQRVTYIRCG 250
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
HT AL D ++ G Y QL
Sbjct: 251 MDHTAALTRDGGVFTFGAGMYGQL 274
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM--EPREIRALSGLGVVQI 88
+T +ACG H LA + G VF+WG+ S GQLG + +M P+ +++L+ VVQI
Sbjct: 86 ITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGL---NVEESMMPTPKMVKSLATKQVVQI 142
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G HS A T G +Y WG N+ GQ+G+ G P + Q I + ++
Sbjct: 143 ACGRSHSMALTNVGEIYCWGSNSHGQLGL-GSSGTPETKPCLVKL-----LQGIPISHIS 196
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG+ + A+ +++G G N + QL +G
Sbjct: 197 CGADFSFAVTPSGAVYGWGKNSFGQLGLG 225
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ + CG +H + + ++G +FS+G GQLG+ S T A EP + L + Q++
Sbjct: 36 IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRA--EP--VDGLEAHNITQVAC 91
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+ A+ + G ++AWG N+ GQ+G+ + ++ P P Q VV +ACG
Sbjct: 92 GAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMM---PTPKMVKSLATKQ---VVQIACG 145
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
H++AL + ++ G N + QL +G
Sbjct: 146 RSHSMALTNVGEIYCWGSNSHGQLGLG 172
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 14/213 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ VT I CG DH ALT++G VF++G G GQLG+ +S + M PR++
Sbjct: 233 PTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANE--MLPRKVLE 290
Query: 80 LSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V QI G H+ A G +YA+G GQ+G + + V+ P + +
Sbjct: 291 LMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLGTKSTAN--VNSPQLVIGPWETS 348
Query: 139 SQNIK-VVDVACGSRHTLALCDDNSL----WGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
+ +IK V D+A + L+ + CG ++ S+ C ++ E
Sbjct: 349 NNSIKDVKDLATETAEALSAIQSKRVVVRNIFCGGDQ--SFSLVCPYTE--SFESADYRE 404
Query: 194 HVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVK 226
H I+ +F + R P+ A D +++
Sbjct: 405 HAVATQILSIFPDEIKKVRALHPDVAVDLDLLR 437
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 19/132 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
++ I+CG D A+T G V+ WG S GQLG T +P ++++L V I
Sbjct: 192 ISHISCGADFSFAVTPSGAVYGWGKNSFGQLGL--GDTTDRPQPTQLKSLRFQRVTYIRC 249
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-----VV 145
G H+AA T+DG ++ +G GQ+G H S +E + ++ V
Sbjct: 250 GMDHTAALTRDGGVFTFGAGMYGQLG------------HCTSANEMLPRKVLELMGTTVT 297
Query: 146 DVACGSRHTLAL 157
+ CG HTLA
Sbjct: 298 QICCGRCHTLAF 309
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P + L + DIA G H ALT G V+ WG G G+LG+ + + M
Sbjct: 234 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMV 293
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL------DLVVHD 127
P++++ LSG +VQIS GG HS A T DG ++++G + G++G K+ ++ +
Sbjct: 294 PQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDI 353
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
P P +E+ + VACG RHTLAL
Sbjct: 354 PPPRGRTENG---HWIAKLVACGGRHTLAL 380
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 16/176 (9%)
Query: 9 PLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
P ++Q+ +P R+ LD+V IA G H LAL ++G +++WGN GQLG + T
Sbjct: 180 PPGDITQI-SVPVRV-QGLDMVRL-IAVGAFHNLALQEDGTLWAWGNNEYGQLG--TGDT 234
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVV 125
+P ++ LSGL +V I+AGGWHS A T +G +Y WG G++G + +V
Sbjct: 235 QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVP 294
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
+S E +V ++CG H++A+ D ++ G ++ +L G V+
Sbjct: 295 QKVQLLSGEE--------IVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVT 342
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 48/194 (24%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G + LA+T++G +F+WG RG LG+P+ GT + P +++ALS + +VQ +
Sbjct: 40 VCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPA-GTKSENVPSQVKALSNVKIVQAAI 98
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD---------------------------- 122
GGWH A G YAWG N GQ G E +
Sbjct: 99 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAA 158
Query: 123 ------LVVHDPHPMSWSEDFDSQNIKVVDV-------------ACGSRHTLALCDDNSL 163
++ + H +W + + +I + V A G+ H LAL +D +L
Sbjct: 159 GGTHSVVLTREGHVWTWGQPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTL 218
Query: 164 WGCGWNEYNQLSMG 177
W G NEY QL G
Sbjct: 219 WAWGNNEYGQLGTG 232
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 64/134 (47%), Gaps = 28/134 (20%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPRE----IRALSGLGVVQISAGGWHSAARTQDGFLY 105
+ +WG+G GQLG N E RE I+AL V + AG +S A T+DG L+
Sbjct: 7 IIAWGSGEDGQLGL------GNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLF 60
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPM-SWSEDFDSQ-----NIKVVDVACGSRHTLALCD 159
WGWN G +G HP + SE+ SQ N+K+V A G H LA+ D
Sbjct: 61 TWGWNQRGTLG------------HPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDD 108
Query: 160 DNSLWGCGWNEYNQ 173
+ G NEY Q
Sbjct: 109 QGRAYAWGGNEYGQ 122
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L VV I
Sbjct: 130 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G ++ WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 187 ACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGN----QPTPCRVAA---LQGIRVQRVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 240 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 16/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC----GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+D L IAC H + T EG VF+WG+ + QLG + T+A + P
Sbjct: 65 PRRLD---SLTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNAGLVPY 119
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 120 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVT 175
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ + ++ G+N QL +G
Sbjct: 176 GCL--QNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLG 216
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G VF WG GQLG SSG P +
Sbjct: 170 IPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPT--PCRV 227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 228 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 284
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 285 -----RIIEIAACHSAHTSA 299
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 224 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVV 280
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 281 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 318
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G V++WG + GQ+G SG+ AN PR + L VV I
Sbjct: 130 VIEVACGSYHSLVLTSDGEVYAWGYNNSGQVG---SGSTANQAIPRRVTGCLQNKVVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 187 ACGQMCSVAVVDTGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIRVQRVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 240 CGFAHTLVLTDEGQVYAWGANSYGQLGTG 268
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D D + ++ G H + T EG VF+WG+ QLG + T+ + P ++
Sbjct: 65 PRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLG--NGTTNHGLVPCQVS 122
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG +YAWG+NN GQVG + + P ++
Sbjct: 123 TNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAI--PRRVTGC--- 177
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ D ++ G+N QL +G
Sbjct: 178 -LQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLG 216
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG P +
Sbjct: 170 IPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 228 AALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 284
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 285 -----RIIEIAACHSTHTSA 299
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACGF H L LT EG V++WG S GQLG +G +N
Sbjct: 224 PCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVV 280
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 281 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 318
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L VV I
Sbjct: 130 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQSKVVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G ++ WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 187 ACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGN----QPTPCRVAA---LQGIRVQRVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 240 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 16/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC----GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+D L IAC H + T EG VF+WG+ + QLG + T+A + P
Sbjct: 65 PRRLD---SLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNAGLVPY 119
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 120 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVT 175
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S+ VV++ACG ++A+ + ++ G+N QL +G
Sbjct: 176 GCLQSK--VVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLG 216
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L VV +IACG +A+ G VF WG GQLG SSG P +
Sbjct: 170 IPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPT--PCRV 227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 228 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 284
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 285 -----RIIEIAACHSAHTSA 299
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 224 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVV 280
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 281 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 318
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 95/193 (49%), Gaps = 19/193 (9%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
+S+ +P + D+V IA G +H LAL ++G V+SWGN GQLG +S D+ +
Sbjct: 333 ISEKLCVPVQFKSLKDVVA--IAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNS-IDSYV 389
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P ++R L VV I+ G HS A +DG ++AWG N GQ+G V P +
Sbjct: 390 -PVQVRGLK--DVVAIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSFV--PVQVK 444
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
+D VV +A GS H+LA D ++W G NE+ QL G G +VP
Sbjct: 445 GLKD-------VVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGSG----GYGQYYAVP 493
Query: 193 EHVKNCPIVKLFA 205
VK V A
Sbjct: 494 VQVKGLKDVVAVA 506
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ D+V IA G H L L ++G V++WG+ GQLG S ++ P +++
Sbjct: 592 VPVQIKGLKDVVA--IAAGEHHSLGLKKDGTVWAWGDNFFGQLG-NSPREKYSLVPVQVK 648
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE--GKLDLVVHDPHPMSWSED 136
L ++ I+ G WHS A +DG ++AWG N+ GQ+G E GK D + P + +D
Sbjct: 649 GLKD--ILAIATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGK-DKYSYVPVQVKGIKD 705
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V+ ++ GS H+LAL D ++WG G N QL G
Sbjct: 706 -------VLAISAGSYHSLALKKDGTVWGWGANARGQLGNG 739
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 22/192 (11%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S+ + P ++ + D+V IA G +H LAL ++G +++WG+ GQLG +S ++
Sbjct: 284 SEDSYDPVQVKNLKDVVA--IAAGENHSLALKKDGTIWAWGDNEWGQLG--NSISEKLCV 339
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + ++L VV I+AG HS A +DG +++WG N GQ+G +D V P +
Sbjct: 340 PVQFKSLKD--VVAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYV--PVQVRG 395
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
+D VV +A G+ H+LAL D ++W G NE+ QL G S VP
Sbjct: 396 LKD-------VVAIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSF-------VPV 441
Query: 194 HVKNCPIVKLFA 205
VK V A
Sbjct: 442 QVKGLKDVVAIA 453
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 89/173 (51%), Gaps = 16/173 (9%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPRE 76
++P ++ D+V IA G H LAL ++G V++WGN GQLG +GT+ ++ P +
Sbjct: 388 YVPVQVRGLKDVVA--IATGNAHSLALKKDGTVWAWGNNEFGQLG---NGTNKSSFVPVQ 442
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSE 135
++ L VV I+AG HS A +DG ++AWG N GQ+G G P + +
Sbjct: 443 VKGLKD--VVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLK 500
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR 188
D VV VA GS H+LAL D ++W G N + L S V V +
Sbjct: 501 D-------VVAVAAGSVHSLALKKDGTIWAWGSNYHGLLGNDIERSFVPVQVK 546
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 21/188 (11%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P ++ D+V IA G DH LA ++G V++WGN GQLG S G P ++
Sbjct: 439 VPVQVKGLKDVVA--IAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQV 496
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L VV ++AG HS A +DG ++AWG N G +G + + V P + +D
Sbjct: 497 KGLK--DVVAVAAGSVHSLALKKDGTIWAWGSNYHGLLGNDIERSFV---PVQVKGLKD- 550
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
VV +A GS H+L L D ++W G ++ L ++ S + SVP +K
Sbjct: 551 ------VVAIAAGSNHSLVLKKDGTVWAWGEVWFDLL------NENSRLVYSSVPVQIKG 598
Query: 198 CPIVKLFA 205
V A
Sbjct: 599 LKDVVAIA 606
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 22/190 (11%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
F +P ++ D+V IA G D+ LAL ++G V+ W + + P +
Sbjct: 185 FSVPFQIKGLKDVVA--IAAGKDYSLALKKDGTVWMWEYKYNYYEQLRRGADEYSPVPVQ 242
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L VV I+AG +HS A +DG ++AWG N GQ+G D +DP +
Sbjct: 243 VEGLKD--VVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSED--SYDPVQV----- 293
Query: 137 FDSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
+N+K VV +A G H+LAL D ++W G NE+ QL S+ +L VP
Sbjct: 294 ---KNLKDVVAIAAGENHSLALKKDGTIWAWGDNEWGQLGN-------SISEKLCVPVQF 343
Query: 196 KNCPIVKLFA 205
K+ V A
Sbjct: 344 KSLKDVVAIA 353
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
L + P + S V P ++ D++ IA G H LA+ ++G V++WG S GQLG
Sbjct: 631 QLGNSPREKYSLV---PVQVKGLKDILA--IATGEWHSLAIKKDGTVWAWGENSTGQLGN 685
Query: 64 PSSGTDA-NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+SG D + P +++ + V+ ISAG +HS A +DG ++ WG N GQ+G
Sbjct: 686 ETSGKDKYSYVPVQVKGIKD--VLAISAGSYHSLALKKDGTVWGWGANARGQLG 737
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IA G H LAL +G V++WG GQ G S ++ P +++ L VV I+A
Sbjct: 48 IIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGTEES----SIIPVKVKGLKD--VVAIAA 101
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVE--GKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G +HS +DG ++AWG N GQ+G G+ +V P + +D VV +A
Sbjct: 102 GRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIV---PVQVKGLKD-------VVAIA 151
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
G ++L L D ++W G NE Q+ G SVP +K V A
Sbjct: 152 AGDGYSLGLKKDGTVWCWGLNESIQVIDGSN-------KDFSVPFQIKGLKDVVAIA 201
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P ++ D++ I+ G H LAL ++G V+ WG +RGQLG +G + + + I
Sbjct: 695 YVPVQVKGIKDVLA--ISAGSYHSLALKKDGTVWGWGANARGQLGNGGAGVYSTVPVQVI 752
>gi|405121061|gb|AFR95830.1| pim1 protein + RNA transporter 2 [Cryptococcus neoformans var.
grubii H99]
Length = 590
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA--NMEPR 75
+ P + + +T ++CG DH LALT G V+ WG G QLG +EP
Sbjct: 254 YTPISLPALSKVQITQVSCGADHVLALTTTGHVYVWGKGEENQLGRRIISRRRINGLEPE 313
Query: 76 EIRALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ GL +V ++AG +HS A G +Y WG N Q GV D+++ P +
Sbjct: 314 RL----GLRNIVHVAAGIYHSFAVDNKGIVYGWGLNTFHQTGVAEHQDMIIA-PTVVDAL 368
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
KV+ V+ G H+L L ++ +WGCG + N+L +
Sbjct: 369 HPDKHNGSKVIKVSGGEHHSLFLFENGEVWGCGRCDANELGI 410
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 65/158 (41%), Gaps = 20/158 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGY-----PSSGTDANMEPRE--------IRAL 80
+ CG H LA+ + G V SWG LG P M P E + L
Sbjct: 143 VYCGGMHTLAIDEAGRVRSWGINDNAALGRITTDVPDPKNPDEMIPNEDLESYPYVVETL 202
Query: 81 S--GLGVVQISAGGWHSAARTQDGFLYAWG--WNNGGQVGVEGKLDLVVHDPHPMSWSED 136
G VQ++AG S A + G L AWG +N G +G +G P+S
Sbjct: 203 EQEGFRAVQVAAGDSISVAISDKGELRAWGSFRSNEGILGFDGVPGHPKFQYTPISLPA- 261
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+++ V+CG+ H LAL ++ G E NQL
Sbjct: 262 --LSKVQITQVSCGADHVLALTTTGHVYVWGKGEENQL 297
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGN--GSRGQLGYPSSGTDANME--PREIRALSGLGVVQIS 89
+A G +A++ +G + +WG+ + G LG+ + P + ALS + + Q+S
Sbjct: 212 VAAGDSISVAISDKGELRAWGSFRSNEGILGFDGVPGHPKFQYTPISLPALSKVQITQVS 271
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H A T G +Y WG Q+G ++ P E +NI V VA
Sbjct: 272 CGADHVLALTTTGHVYVWGKGEENQLGRRIISRRRINGLEP----ERLGLRNI--VHVAA 325
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQ 173
G H+ A+ + ++G G N ++Q
Sbjct: 326 GIYHSFAVDNKGIVYGWGLNTFHQ 349
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA--LSGLG 84
D V DI+ G H LA+++ G +++WG G+ QLG G++ E P +R+ L
Sbjct: 510 DNPVVDISAGMRHNLAVSKSGHLYAWGYGNLAQLGL---GSEEVAEVPSLVRSKLLRPYR 566
Query: 85 VVQISAGGWHSAA 97
V +SAGG H A
Sbjct: 567 SVAVSAGGQHCVA 579
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 62/157 (39%), Gaps = 33/157 (21%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEP----------------REIRALSGLGVVQISAGGW 93
+F WG G +GQ G D P R+ + SG G+ + GG
Sbjct: 90 LFVWGTGDQGQFGLGPDNLDEIGRPKLHSWFEEQIEEGNLSRDGKPGSG-GLEYVYCGGM 148
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH---PMSWSEDFDS----------Q 140
H+ A + G + +WG N+ + G++ V DP M +ED +S +
Sbjct: 149 HTLAIDEAGRVRSWGINDNAAL---GRITTDVPDPKNPDEMIPNEDLESYPYVVETLEQE 205
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V VA G ++A+ D L G N+ +G
Sbjct: 206 GFRAVQVAAGDSISVAISDKGELRAWGSFRSNEGILG 242
>gi|375267564|emb|CCD28232.1| regulator of chromosome condensation, partial [Plasmopara viticola]
Length = 287
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P +D D V ++CG H +AL G V+SWG GS GQLG+ + +
Sbjct: 35 NFPQNIDGLQDEEVVAVSCGSRHTMALAASGAVYSWGWGSMGQLGHGDLKSVNIPQKVVF 94
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+GL V IS GG HSAA T+DG LY WG ++ GQ+G+ K H+ P+
Sbjct: 95 FEQNGLKVNYISCGGCHSAAVTKDGTLYMWGESHWGQLGLP-KEHEAAHESLPVECPMPE 153
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+V V+CG HT AL + ++ G + QL +G
Sbjct: 154 GLTKECIVKVSCGGTHTAALTNHGRVYIWGRGDSGQLGIG 193
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS----GTDANM----EPREIRALSG 82
+ ++CG H ALT G V+ WG G GQLG S+ D ++ P+ + +G
Sbjct: 160 IVKVSCGGTHTAALTNHGRVYIWGRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDGFNG 219
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
VVQ++ G +HSAA T+ G++Y W + G +G+ D +P S S FD
Sbjct: 220 ERVVQVACGAFHSAAVTEKGYVYIWXKEDYGMLGIGQSSDX----QNPKSASSFFD 271
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 50 VFSWGNGSRGQLGYPSS--------GTDANMEPREIRALSGLGVVQISAGGWHSAARTQD 101
V ++G GQLG + G A P+ I L VV +S G H+ A
Sbjct: 5 VITFGCNDDGQLGTGAKRRPMLAIDGVSAANFPQNIDGLQDEEVVAVSCGSRHTMALAAS 64
Query: 102 GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDN 161
G +Y+WGW + GQ+G G L V+ P + + F+ +KV ++CG H+ A+ D
Sbjct: 65 GAVYSWGWGSMGQLG-HGDLK-SVNIPQKVVF---FEQNGLKVNYISCGGCHSAAVTKDG 119
Query: 162 SLWGCGWNEYNQLSMGC--GVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
+L+ G + + QL + + S+ +PE + IVK+ ++A L+
Sbjct: 120 TLYMWGESHWGQLGLPKEHEAAHESLPVECPMPEGLTKECIVKVSCGGTHTAALT 174
>gi|340500028|gb|EGR26934.1| phosphatidylinositol 3- and 4-kinase family protein, putative
[Ichthyophthirius multifiliis]
Length = 651
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 32/200 (16%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--------PSSGTDANMEPREIRALSG 82
+ I+ G DH L LTQ G +++ G+ + GQ G P PR++ AL
Sbjct: 389 IKQISSGEDHLLFLTQAGDIYTLGDDTYGQCGLGASNRVPCPPFKERRVKNPRKVNALDA 448
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-----GKLDLV-VHDPHPMSWSED 136
VV+++ G HS A TQ+G LY WG N Q+ E G+ LV +++P + + +
Sbjct: 449 -KVVKVACGKNHSLAVTQEGNLYGWGLNQNMQLSQELEFSKGEEPLVCLYEPLQIKKNLE 507
Query: 137 FDSQNIKVVDVACGSRHTLALC-----DDNSLWGCGWNEYNQLSMG-----CGVSQVSVM 186
F K+VDVA G HT+ + ++ ++GCG+N +L +G C V +V +
Sbjct: 508 FS----KIVDVAAGEAHTMIVSVNRQNEETEVFGCGYNNKGELGVGLLRHICDVEKVDGL 563
Query: 187 TRLSVPE---HVKNCPIVKL 203
+ + + KN I K+
Sbjct: 564 SNFKIQDKDGQYKNVRIKKI 583
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 19/157 (12%)
Query: 22 RMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP---SSGTDANM---EPR 75
R + LD V +ACG +H LA+TQEG ++ WG QL S G + + EP
Sbjct: 441 RKVNALDAKVVKVACGKNHSLAVTQEGNLYGWGLNQNMQLSQELEFSKGEEPLVCLYEPL 500
Query: 76 EIRA-LSGLGVVQISAGGWHSA-----ARTQDGFLYAWGWNNGGQVGVEGKL----DLVV 125
+I+ L +V ++AG H+ + ++ ++ G+NN G++GV G L D+
Sbjct: 501 QIKKNLEFSKIVDVAAGEAHTMIVSVNRQNEETEVFGCGYNNKGELGV-GLLRHICDVEK 559
Query: 126 HDPHPMSWSEDFDSQ--NIKVVDVACGSRHTLALCDD 160
D +D D Q N+++ + CG RH LAL D+
Sbjct: 560 VDGLSNFKIQDKDGQYKNVRIKKIVCGDRHCLALIDE 596
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG 91
T I + AL Q+G V+ W + + D + +++ +LS + QIS+G
Sbjct: 338 TQICTTQSYLWALNQKGEVYQWNIQQQKEGQQQIPIVDIKSK-KKLTSLSE-KIKQISSG 395
Query: 92 GWHSAARTQDGFLYAWGWNNGGQ--VGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
H TQ G +Y G + GQ +G ++ + ++ + KVV VAC
Sbjct: 396 EDHLLFLTQAGDIYTLGDDTYGQCGLGASNRVPCPPFKERRVKNPRKVNALDAKVVKVAC 455
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ-----VSVMTRLSVPEHVKNCPIVKLF 204
G H+LA+ + +L+G G N+ QLS S+ V + L + ++++ IV +
Sbjct: 456 GKNHSLAVTQEGNLYGWGLNQNMQLSQELEFSKGEEPLVCLYEPLQIKKNLEFSKIVDVA 515
Query: 205 AEHWNSARLSVPEHAKDSSIVKLFAGHWNSGIL 237
A ++ +SV +++ + G+ N G L
Sbjct: 516 AGEAHTMIVSVNRQNEETEV--FGCGYNNKGEL 546
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQE-GIVFSWGNGSRGQLG 62
F + + + ++ + I CG HCLAL E G+V WG+ GQLG
Sbjct: 566 FKIQDKDGQYKNVRIKKIVCGDRHCLALIDELGVVMEWGDNENGQLG 612
>gi|403350318|gb|EJY74616.1| hypothetical protein OXYTRI_04126 [Oxytricha trifallax]
gi|403370253|gb|EJY84990.1| hypothetical protein OXYTRI_17158 [Oxytricha trifallax]
Length = 1116
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY---------PSSGTDANMEPREIRALS 81
+ ++ACG DH LT +G V+S G+ +LG P +G + + P+ + L
Sbjct: 72 IKEVACGEDHSCLLTLQGHVYSMGSNQFNKLGVKNLNTFQTSPKNGFEYSNTPKLVELLV 131
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL--------VVHDPHPMSW 133
V+ IS G H+A + DG + WG GQ+G+ GK+ V S
Sbjct: 132 NYEVISISCGWNHTACVSIDGLSFTWGQYEYGQLGL-GKISSQQRRNESSVFQQGIFPSI 190
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E F NIK+V+VACG +HTL L + ++ G N + QL +G
Sbjct: 191 VEFFQQNNIKIVNVACGGKHTLFLSRNGQVYSMGDNSFGQLGIG 234
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 50/187 (26%)
Query: 14 SQVFH---MPSRMDHFL--DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
S VF PS ++ F ++ + ++ACG H L L++ G V+S G+ S GQLG
Sbjct: 179 SSVFQQGIFPSIVEFFQQNNIKIVNVACGGKHTLFLSRNGQVYSMGDNSFGQLGIGMQDI 238
Query: 69 DANMEPREIRALS-----------------------GLGV---------------VQISA 90
P + +LS G GV + +S
Sbjct: 239 QYKDIPTRVPSLSNITKISSGHHSAALSSSGQLFFWGTGVFGSFYEPKGVIDSDIIDVSV 298
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG AA +DG ++ WG N+ G++GV G + + P+P+++ +N KV VACG
Sbjct: 299 GGCFGAALDRDGLIWTWGSNSKGELGV-GDFEPRPY-PYPVTY-----LKNKKVNKVACG 351
Query: 151 SRHTLAL 157
LA+
Sbjct: 352 GSFALAI 358
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY----------PSSGTD 69
P ++ ++ V I+CG++H ++ +G+ F+WG GQLG SS
Sbjct: 124 PKLVELLVNYEVISISCGWNHTACVSIDGLSFTWGQYEYGQLGLGKISSQQRRNESSVFQ 183
Query: 70 ANMEPR--EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
+ P E + + +V ++ GG H+ +++G +Y+ G N+ GQ+G+ G D+ D
Sbjct: 184 QGIFPSIVEFFQQNNIKIVNVACGGKHTLFLSRNGQVYSMGDNSFGQLGI-GMQDIQYKD 242
>gi|22795248|gb|AAN08220.1| putative chromosome condensation regulator [Oryza sativa Japonica
Group]
gi|108709680|gb|ABF97475.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
Length = 505
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 20/173 (11%)
Query: 14 SQVFHMPSR-MDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDA 70
++V + +R +D +LV + ++CG H A+++ G V++WG GS GQLG+ S D
Sbjct: 235 ARVLNAYARFLDEAPELVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDK 294
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHD 127
+ PR + AL + +S GG HS A T+DG LYAWG + GQ+G+ G ++
Sbjct: 295 ELIPRRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGFFSCALN- 353
Query: 128 PHPMSWSEDFDSQNIKVVD-------VACGSRHTLALCDDNSLWGCGWNEYNQ 173
D +NI V+ V CG HTL D+ ++G G+N Y Q
Sbjct: 354 ------GSDMLLRNIPVLVIPSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYGQ 400
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 41/214 (19%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQISAG 91
D+ACG H A+ +G +++WG GQLG GT+ + EP++++AL V +S G
Sbjct: 64 DVACGRGHTAAVASDGSLYTWGANDFGQLG---DGTEESAKEPQKVKALETEFVKSVSCG 120
Query: 92 GWHSAA----RTQDGF-----LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED------ 136
+AA R +G L+ WG N G +L P+ S + +
Sbjct: 121 AHCTAAVAEPRENNGTISRSRLWVWGQNQGSDY---PRLFWGAFAPNTASGATEQSTITC 177
Query: 137 -------FDSQNIKVV-DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC------GVSQ 182
+++V+ V+CG+ H +AL +D L G+NEY QL GC G
Sbjct: 178 ASSQFLSLRCLSLEVIHQVSCGAVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARV 237
Query: 183 VSVMTRL--SVPEHVKNCPIVKLFAEHWNSARLS 214
++ R PE VK IV++ +++A +S
Sbjct: 238 LNAYARFLDEAPELVK---IVRVSCGEYHTAAIS 268
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDA----NMEPREI-RALSG 82
V+ ++CG H +AL+++G++ +WG GQLG S G N R + A
Sbjct: 192 VIHQVSCGAVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPEL 251
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG----VEGKLDLVVHDPHPMSWSEDFD 138
+ +V++S G +H+AA +++G +Y WG + GQ+G G +L+ P + D
Sbjct: 252 VKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELI---PRRVV---ALD 305
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I+ DV+CG H+ A+ +D +L+ G QL +G
Sbjct: 306 RTVIR--DVSCGGVHSCAVTEDGALYAWGGGHVGQLGLG 342
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 16/153 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSG------TDAN 71
+P R+ V+ D++CG H A+T++G +++WG G GQLG P SG ++
Sbjct: 297 IPRRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGFFSCALNGSD 356
Query: 72 MEPREIRALS-GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
M R I L GV ++ G H+ +D +Y WG+N+ GQ E P P
Sbjct: 357 MLLRNIPVLVIPSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYGQAANEK--STYAWFPSP 414
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ W +V +A G H+ L D SL
Sbjct: 415 VDWCVG------EVRRLAAGGGHSAVLTDACSL 441
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GG A +Y WG+N+ GQ +GK L + P + D +N++ +DVAC
Sbjct: 8 GGLRVAGVPTKSAIYLWGYNHSGQTARKGKECHLRIPKSLPPKLFKWQDGKNLRWIDVAC 67
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G HT A+ D SL+ G N++ QL G
Sbjct: 68 GRGHTAAVASDGSLYTWGANDFGQLGDG 95
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG----VEGK 120
S+ T A+ + +R LS + Q+S G H A ++DG L AWG+N GQ+G EG
Sbjct: 173 STITCASSQFLSLRCLSLEVIHQVSCGAVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGL 232
Query: 121 LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V + + E + +K+V V+CG HT A+ ++ ++ G QL
Sbjct: 233 QGARVLNAYARFLDE--APELVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQL 284
>gi|356569139|ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Glycine max]
Length = 459
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IACG H +T G V ++G G GQ G S TD + P + +L G+ + ++A
Sbjct: 284 IKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGS--TDDELSPSCVSSLLGIQIEGVAA 341
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVAC 149
G WH+ + DG +YA+G N GQ+G G D P + D S +N+ V ++C
Sbjct: 342 GLWHTVCTSVDGDVYAFGGNQFGQLGTGG--DQAETIPRLL----DCPSLENVNVKRISC 395
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+RHT + D+ ++ GWN+Y QL +G
Sbjct: 396 GARHTALIADNGKVFCWGWNKYGQLGLG 423
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR--EI 77
PS + L + + +A G H + + +G V+++G GQLG + G A PR +
Sbjct: 325 PSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLG--TGGDQAETIPRLLDC 382
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L + V +IS G H+A +G ++ WGWN GQ+G+ +D + +
Sbjct: 383 PSLENVNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNI--------PSEV 434
Query: 138 DSQNIKVVDVACGSRHTLALCD 159
+ +VACG HTL L +
Sbjct: 435 TIEGCVAKNVACGWWHTLLLAE 456
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 91/244 (37%), Gaps = 77/244 (31%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWG--------- 54
++ SG + F +P+ ++ + A G+ HC+++T G V++WG
Sbjct: 81 YVTSGKHGETPEPFPLPT------EVTIVKAAAGWAHCVSVTDCGEVYTWGWRECVPSGK 134
Query: 55 -----------------NGSRGQLGYPSSGTDANMEPREIRALS---------------- 81
S G +SGT + R S
Sbjct: 135 VFGESLTGVSPEKDVPRRQSSKSTGGTASGTSGEESSKRRRVSSAKQTAETSSSSDDTQT 194
Query: 82 ----------GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
G+ + ++AGG H+ A + G ++ WG+ GQ+G+ ++ + V PH +
Sbjct: 195 ALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-VSSPHLV 253
Query: 132 ------SWSEDF-------DSQNIKV-----VDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
S+ +D D QN +V +ACG RH+ + D ++ GW Y Q
Sbjct: 254 PCINSSSYGKDMARVSISSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQ 313
Query: 174 LSMG 177
G
Sbjct: 314 CGQG 317
Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 71/197 (36%), Gaps = 50/197 (25%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
CGF +A+++ G + +WG+ Y +SG P + + +V+ +AG H
Sbjct: 55 GCGF--AMAISEPGKLITWGSTDDLGQSYVTSGKHGET-PEPFPLPTEVTIVKAAAGWAH 111
Query: 95 SAARTQDGFLYAWGW-------------------------------NNGGQVGVEG---- 119
+ T G +Y WGW G G G
Sbjct: 112 CVSVTDCGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPRRQSSKSTGGTASGTSGEESS 171
Query: 120 ---KLDLVVHDPHPMSWSEDFDSQ---------NIKVVDVACGSRHTLALCDDNSLWGCG 167
++ S S+D + +++ VA G RHTLAL D +WG G
Sbjct: 172 KRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWG 231
Query: 168 WNEYNQLSMGCGVSQVS 184
+ QL +G + VS
Sbjct: 232 YGGEGQLGLGSRIRMVS 248
>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
1279]
Length = 593
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLG---YPSSGTDANMEPREIRALSGLGVVQISA 90
I+ G H +ALT +G V + G GQLG SSGT R+ +G+ V + A
Sbjct: 277 ISLGEYHAIALTNDGRVVTLGRDDYGQLGDGPGDSSGTHTAPNLRDNILPAGIKAVAVQA 336
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HS A T +G +YAWG N+ GQ+G+ G + P + D V+ +A G
Sbjct: 337 GRYHSLALTSEGTVYAWGRNDVGQLGL-GTITAPQESPALIPGLSD-------VIALAAG 388
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWN 209
HTLAL D S+W G N +L G +T SVP V N P VK A N
Sbjct: 389 DDHTLALKADGSVWAWGDNPNGELGTGD-------ITPYSVPTAVSNLPGVKAIAAGGN 440
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L ++ P+ + D++ +A G DH LAL +G V++WG+ G+LG
Sbjct: 363 LGTITAPQESPALIPGLSDVIA--LAAGDDHTLALKADGSVWAWGDNPNGELGT------ 414
Query: 70 ANMEPREI-RALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
++ P + A+S L GV I+AGG HS A DG + WG+NN GQ+G + V
Sbjct: 415 GDITPYSVPTAVSNLPGVKAIAAGGNHSVALLADGTVRTWGYNNHGQLGNGSNTNSNV-- 472
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
P P++ D VV +A G TLA+ + S+ G ++ QL G
Sbjct: 473 PVPVTGLTD-------VVGIAAGYEFTLAVLSNGSVKAWGHDDSFQLGNGA 516
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L +A G A+ G V+SWG+ + GQLG ++ + ++ P + ++ V I
Sbjct: 221 LRANTLAAGGYFSAAIKPNGQVWSWGDNTYGQLGRATT-SPSDSTPTQASLIN--DAVSI 277
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
S G +H+ A T DG + G ++ GQ+G +G D P + ++ IK V V
Sbjct: 278 SLGEYHAIALTNDGRVVTLGRDDYGQLG-DGPGDSSGTHTAP-NLRDNILPAGIKAVAVQ 335
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
G H+LAL + +++ G N+ QL +G
Sbjct: 336 AGRYHSLALTSEGTVYAWGRNDVGQLGLGT 365
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P + D+V IA G++ LA+ G V +WG+ QLG ++ D P ++
Sbjct: 471 NVPVPVTGLTDVV--GIAAGYEFTLAVLSNGSVKAWGHDDSFQLGNGATTGD-QTTPVDV 527
Query: 78 RAL-SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+ + +G V ++AG +H+ A DG + AWG N GQ+G
Sbjct: 528 QGIPTGRSVRGLTAGIFHALALLDDGSMVAWGSNVQGQLG 567
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
SSG P +R L ++AGG+ SAA +G +++WG N GQ+ G+
Sbjct: 206 SSGNLTRTAPLTLRVLR---ANTLAAGGYFSAAIKPNGQVWSWGDNTYGQL---GRATTS 259
Query: 125 VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
D P S D+ V ++ G H +AL +D + G ++Y QL G G
Sbjct: 260 PSDSTPTQASLINDA-----VSISLGEYHAIALTNDGRVVTLGRDDYGQLGDGPG 309
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 9/171 (5%)
Query: 8 GPLKMLSQVFH-MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS 66
G L ++V H P R++ F+ V IACG H AL G V+ WG+ G G +
Sbjct: 121 GKLGHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEA 180
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
+ P+++ AL G+ + QI+A G+H+AA TQDG L++WG G++G + + V
Sbjct: 181 AEHQYL-PKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVT- 238
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P Q ++V VACG H+ + +D + G E+ QL G
Sbjct: 239 ---PCCVE---GLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHG 283
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 20/213 (9%)
Query: 18 HMPSRMDHFLDLVVTDIA-CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPR 75
++P +++ + +T IA CGF H A+TQ+G ++SWG G G+LG G + N + P
Sbjct: 185 YLPKKLEALKGVKITQIAACGF-HTAAITQDGALWSWGEGKFGRLG---QGNEKNQVTPC 240
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L G+ V Q++ GG+HSA T+DG + +G GQ+G K + V P + E
Sbjct: 241 CVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTV--PCLVKALE 298
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
+V V CG HT+ L +D ++ G ++ +L G G + S + +L E +
Sbjct: 299 -----GAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKL--GHGANAKSALPKLV--ESL 349
Query: 196 KNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLF 228
N + K+ + + ++ L HA+ V F
Sbjct: 350 ANMKVAKVASYNEHTVALC---HAEQEQAVMSF 379
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP ++ L V IACG H + LT++ V+SWG G G+LG+ + P +
Sbjct: 29 MPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADN--HWKYVPHLVS 86
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL+G + Q++ G +H+AA + G L+ WG GG G G + V H P P E F
Sbjct: 87 ALTGKSIKQVTCGSYHTAAISDTGALWTWG---GGMYGKLGHGNEVGH-PAPCR-VEAFI 141
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP-EHVKN 197
+ ++ +ACGSRHT AL ++ C + N + CG+ + + L E +K
Sbjct: 142 GREVE--QIACGSRHTAALLAGGEVY-CWGDRENGV---CGIGEAAEHQYLPKKLEALKG 195
Query: 198 CPIVKLFAEHWNSARLS 214
I ++ A +++A ++
Sbjct: 196 VKITQIAACGFHTAAIT 212
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+++SWG G GQ G S+ D M P + L L VVQI+ G H+ T+D +++WG
Sbjct: 7 MLYSWGRGEDGQCGNGST-NDQEM-PMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWG 64
Query: 109 WNNGGQVG-VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
+ G++G + V PH +S ++IK V CGS HT A+ D +LW G
Sbjct: 65 RGDDGRLGHADNHWKYV---PHLVS---ALTGKSIK--QVTCGSYHTAAISDTGALWTWG 116
Query: 168 WNEYNQLSMG 177
Y +L G
Sbjct: 117 GGMYGKLGHG 126
>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
Length = 526
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 76/149 (51%), Gaps = 13/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + + L VV I
Sbjct: 130 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTSSLQNKVVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ + S Q ++V VA
Sbjct: 187 ACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGN--------QSTPCRLALQGVRVQRVA 238
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 239 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 267
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 17/177 (9%)
Query: 20 PSRMDHFLDLVVTDIAC----GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+D L IAC H + T EG VF+WG+ + QLG + T+ + P
Sbjct: 65 PRRLD---SLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPC 119
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 120 HISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVT 175
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
QN VV++ACG ++A+ D+ ++ G+N QL +G +Q S RL++
Sbjct: 176 SSL--QNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQ-STPCRLAL 229
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG + P +
Sbjct: 170 IPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQST--PCRL 227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 228 -ALQGVRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 283
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 284 -----RIIEIAACHSAHTSA 298
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG+ H L LT EG V++WG S GQLG +G +N + +++I+A
Sbjct: 234 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVVVEKDRIIEIAA 290
Query: 91 --GGWHSAARTQDGFLYAWGWNNGGQV 115
SAA+TQ G +Y WG G V
Sbjct: 291 CHSAHTSAAKTQGGHVYMWGQCRGQSV 317
>gi|339239469|ref|XP_003381289.1| DNA polymerase epsilon subunit 2 [Trichinella spiralis]
gi|316975691|gb|EFV59095.1| DNA polymerase epsilon subunit 2 [Trichinella spiralis]
Length = 1153
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV-- 86
L+V +ACG H L ++ G V+ G+ + GQLG + + + L V
Sbjct: 516 LMVKRVACGRHHLLFMSSVGFVYGRGSNAYGQLGV----GQQQLCSKPVLITPCLSVTHP 571
Query: 87 --QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
+I G +HS A G Y+WGWN GQ+G+ G +++V H P PM + + + +
Sbjct: 572 IRRIGCGAYHSVAIDVRGHAYSWGWNAHGQLGL-GHVNIVRH-PCPMRIKQAW----LPL 625
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
DV CG HT+ LC + L+GCG N Y QL + + + + LS
Sbjct: 626 QDVQCGIAHTIVLCKNGHLYGCGSNRYAQLGLHLDLVKQVELVELS 671
>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
carolinensis]
Length = 530
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI-RALSGLGVVQI 88
V ++ACG H LAL+ +G V++WG + GQ+G SG+ AN PR++ L VV I
Sbjct: 129 VIEVACGSHHSLALSSDGDVYAWGYNNCGQVG---SGSTANQPTPRKVSNCLQTKIVVSI 185
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ ++ + ++ Q + ++ +A
Sbjct: 186 ACGQTSSVAIVDNGEVYGWGYNGNGQLGLG-------NNGNQLTPCRVAALQGVCIMQIA 238
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
CG HTLAL D+ ++ G N Y QL G +Q+S L E V
Sbjct: 239 CGYAHTLALTDEGLMYSWGANTYGQLGTGNKSNQLSPGQILMEKERV 285
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RALSGLGVVQISAGGWHSAAR 98
H + T++G V++WG+ QLG + T+ + P ++ L V++++ G HS A
Sbjct: 85 HVVLSTEDGEVYAWGHNGYSQLG--NGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLAL 142
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
+ DG +YAWG+NN GQVG + P P S Q VV +ACG ++A+
Sbjct: 143 SSDGDVYAWGYNNCGQVGSGS----TANQPTPRKVSNCL--QTKIVVSIACGQTSSVAIV 196
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVS 184
D+ ++G G+N QL +G +Q++
Sbjct: 197 DNGEVYGWGYNGNGQLGLGNNGNQLT 222
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 12/139 (8%)
Query: 20 PSRMDHFLDL-VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P ++ + L +V IACG +A+ G V+ WG GQLG ++G + P +
Sbjct: 170 PRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQ--LTPCRVA 227
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ ++QI+ G H+ A T +G +Y+WG N GQ+G K + + P + ++
Sbjct: 228 ALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLGTGNKSNQL--SPGQILMEKE-- 283
Query: 139 SQNIKVVDV-ACGSRHTLA 156
+VV++ AC S HT A
Sbjct: 284 ----RVVEIAACHSAHTSA 298
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ + + IACG+ H LALT EG+++SWG + GQLG +G +N + P +I
Sbjct: 223 PCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLG---TGNKSNQLSPGQI- 278
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ VV+I+A SAA+TQ G +Y WG G V
Sbjct: 279 LMEKERVVEIAACHSAHTSAAKTQSGLVYMWGQCRGQSV 317
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 20/181 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
++ AC F + + +T VF +G LG + + + P+++ +LSG
Sbjct: 16 EIATIRKACVFGTSANEAIYITHNDEVFVFGLNCSNCLG--TGDNQSTIVPKKLESLSGK 73
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T+DG +YAWG N Q+G G + V P+ + +
Sbjct: 74 RIRSLSYGSGPHVVLSTEDGEVYAWGHNGYSQLG-NGTTNQGV---TPIQVCTNLLIK-- 127
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVK 202
KV++VACGS H+LAL D ++ G+N Q+ G +Q P V NC K
Sbjct: 128 KVIEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQ-------PTPRKVSNCLQTK 180
Query: 203 L 203
+
Sbjct: 181 I 181
>gi|356569137|ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Glycine max]
Length = 472
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IACG H +T G V ++G G GQ G S TD + P + +L G+ + ++A
Sbjct: 297 IKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGS--TDDELSPSCVSSLLGIQIEGVAA 354
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVAC 149
G WH+ + DG +YA+G N GQ+G G D P + D S +N+ V ++C
Sbjct: 355 GLWHTVCTSVDGDVYAFGGNQFGQLGTGG--DQAETIPRLL----DCPSLENVNVKRISC 408
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+RHT + D+ ++ GWN+Y QL +G
Sbjct: 409 GARHTALIADNGKVFCWGWNKYGQLGLG 436
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR--EI 77
PS + L + + +A G H + + +G V+++G GQLG + G A PR +
Sbjct: 338 PSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLG--TGGDQAETIPRLLDC 395
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L + V +IS G H+A +G ++ WGWN GQ+G+ +D + +
Sbjct: 396 PSLENVNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNI--------PSEV 447
Query: 138 DSQNIKVVDVACGSRHTLALCD 159
+ +VACG HTL L +
Sbjct: 448 TIEGCVAKNVACGWWHTLLLAE 469
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 19/114 (16%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM------SWSE 135
G+ + ++AGG H+ A + G ++ WG+ GQ+G+ ++ +V PH + S+ +
Sbjct: 218 GVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV-SSPHLVPCINSSSYGK 276
Query: 136 DF-------DSQNIKV-----VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D D QN +V +ACG RH+ + D ++ GW Y Q G
Sbjct: 277 DMARVSISSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQG 330
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 28/195 (14%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWG---NGSRGQ 60
++ SG + F +P+ ++ + A G+ HC+++T G V++WG G+
Sbjct: 81 YVTSGKHGETPEPFPLPT------EVTIVKAAAGWAHCVSVTDCGEVYTWGWRECVPSGK 134
Query: 61 LGYPSSGTDANMEPREIRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
+ + S T + E R S Q+S + G S T G +G +
Sbjct: 135 V-FGESLTGVSPEKDVPRRQSSFLTEQVSPRSQGSKSTGGTASG-------TSGEESSKR 186
Query: 119 GKLDLVVHDPHPMSWSEDFDSQ---------NIKVVDVACGSRHTLALCDDNSLWGCGWN 169
++ S S+D + +++ VA G RHTLAL D +WG G+
Sbjct: 187 RRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYG 246
Query: 170 EYNQLSMGCGVSQVS 184
QL +G + VS
Sbjct: 247 GEGQLGLGSRIRMVS 261
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 75/149 (50%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG AN PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGPTANQPIPRRVTGCLQNKVVVNI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLG----LGSGGNQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 10/165 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P +I
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCQIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS----GPTANQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
QN VV++ACG ++A+ D ++ G+N QL +G G +Q
Sbjct: 203 --QNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQ 245
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG S G P +
Sbjct: 194 IPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSTHTSA 323
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVV 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
Length = 1224
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 14/152 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA G D LAL +G V+SWG + G+LG + T + P ++ L+ V I+A
Sbjct: 841 VVAIAAGKDFSLALKSDGTVWSWGQNTYGELG--NGTTTRSSVPVQVALLTD--VKAIAA 896
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +H A +DG ++AWG+N G++G + +S S S + +A G
Sbjct: 897 GDYHGVALKKDGSVFAWGYNGNGELG----------NSSTISQSTPVQSGVTGIKGIAAG 946
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
HTLAL D ++W G+N Y QL G S+
Sbjct: 947 PYHTLALKSDGTVWSWGYNGYGQLGSGNNTSR 978
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
+H + + +G V+ WG GQLG +S + + P ++ L+G+ + I+ G H+ A
Sbjct: 699 NHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTS--VPGKVINLTGMKM--IAGGENHTVAL 754
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
DG L+ WG+N GQ+G D +S S V+ G H+LAL
Sbjct: 755 RSDGTLHTWGYNGYGQLG---------DDSTTTRYSPVQVSTLTNWTAVSAGENHSLALK 805
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQ 182
D ++W G+N Y QL G SQ
Sbjct: 806 SDGTVWAFGYNGYGQLGDGTTSSQ 829
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 79/173 (45%), Gaps = 22/173 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G +H +AL +G + +WG GQLG S+ T P ++ L+ V SAG
Sbjct: 744 IAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTT--RYSPVQVSTLTNWTAV--SAGEN 799
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSR 152
HS A DG ++A+G+N GQ+G D S +++ VV +A G
Sbjct: 800 HSLALKSDGTVWAFGYNGYGQLG----------DGTTSSQRTPVQVKDLTGVVAIAAGKD 849
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
+LAL D ++W G N Y +L G TR SVP V VK A
Sbjct: 850 FSLALKSDGTVWSWGQNTYGELGNG-------TTTRSSVPVQVALLTDVKAIA 895
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IA G H LAL +G V+SWG GQLG S + P I L+ + I+A
Sbjct: 940 IKGIAAGPYHTLALKSDGTVWSWGYNGYGQLG--SGNNTSRSVPAAIPGLASMA--SIAA 995
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
G S A DG LY+WG N GQ+G +D V PH
Sbjct: 996 GENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNV--PH 1032
Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 23/102 (22%)
Query: 81 SGLGVVQISAG--GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+ LG V ++ G H+ DG ++ WG+N GQ+G + + +
Sbjct: 685 AALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLG---------------TGTSNST 729
Query: 139 SQNIKVVD------VACGSRHTLALCDDNSLWGCGWNEYNQL 174
S KV++ +A G HT+AL D +L G+N Y QL
Sbjct: 730 SVPGKVINLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQL 771
>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cucumis sativus]
Length = 302
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 9/153 (5%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG+ H ++++ G ++++G GQLG+ + + P + AL G + QIS G
Sbjct: 86 VACGWRHTISVSSLGGLYTYGWSKYGQLGHGD--FEDRLVPHRLEALRGDNISQISGGWR 143
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ A T DG LY WGWN GQVG +D P + + +D KV+ ++CG RH
Sbjct: 144 HTMALTTDGKLYGWGWNKFGQVGAGDNIDHC--SPIQIKFPQDQ-----KVIQISCGWRH 196
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
TLA+ D +++ G QL G V + + M
Sbjct: 197 TLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPM 229
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 9/125 (7%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG GQLG + T+ ++ P++I+A G+ + ++AG H+AA T+DG L+ WGW
Sbjct: 1 WGRNQNGQLGLGT--TEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRY 58
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
G +G+ + D +V P +S S D D K+V VACG RHT+++ L+ GW++Y
Sbjct: 59 GNLGLGDRNDRLV--PQKVS-SVDGD----KMVMVACGWRHTISVSSLGGLYTYGWSKYG 111
Query: 173 QLSMG 177
QL G
Sbjct: 112 QLGHG 116
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P R++ ++ I+ G+ H +ALT +G ++ WG GQ+G + + P +I+
Sbjct: 123 VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVG--AGDNIDHCSPIQIK 180
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
V+QIS G H+ A T +++WG GQ+G
Sbjct: 181 FPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLG 218
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D V I+CG+ H LA+T + VFSWG G+ GQLG+ S D N P + A
Sbjct: 176 PIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGES-VDRNT-PMILEA 233
Query: 80 LS 81
LS
Sbjct: 234 LS 235
>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
Length = 1178
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-----------PREIRALSGL 83
+CG H + LT +G ++ +G GS GQLG+ G + M P++I +L G+
Sbjct: 215 SCGDVHTMVLTDQGEIYCFGGGSCGQLGF---GNISQMPLDVDSCPFMPVPKKIESLQGI 271
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL---VVHDPHPMSWSEDFDSQ 140
+V +S G HS A +++G +YAWG GQ+G++ DL + P+ +
Sbjct: 272 FIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNTDNKPYQPFPQKVVALM 331
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
N K+V ++CG HTLAL + L+ G N QL
Sbjct: 332 NKKIVAISCGETHTLALTEGGHLYSFGGNTCGQL 365
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--------PREIRA 79
+L V +ACG H +A+ G ++SWG G+ GQLG+P + + E PR + A
Sbjct: 146 NLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVTA 205
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE--GKLDLVVHDPHPMSWSEDF 137
L ++ S G H+ T G +Y +G + GQ+G ++ L V M +
Sbjct: 206 LKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPKKI 265
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+S Q I +V ++CG H++AL + ++ G Y QL +
Sbjct: 266 ESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGL 305
Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats.
Identities = 59/192 (30%), Positives = 85/192 (44%), Gaps = 40/192 (20%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--------GTDANMEPREIRALSG 82
V IACG H +ALTQ+G ++SWG G GQLG+P + G +P+ I L
Sbjct: 87 VIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQPKPKLIVVLKN 146
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS--- 139
L V Q++ G H+ A +G LY+WG GQ+G P S+ D D
Sbjct: 147 LEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLG----------HPDTSSFPADEDGYPY 196
Query: 140 ----------QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ K++ +CG HT+ L D ++ G QL G +SQ
Sbjct: 197 QPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFG-NISQ------- 248
Query: 190 SVPEHVKNCPIV 201
+P V +CP +
Sbjct: 249 -MPLDVDSCPFM 259
Score = 67.0 bits (162), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 4 HLASGPLKMLSQVFH-MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
+++ PL + S F +P +++ + + ++CG H +AL++EG V++WG + GQLG
Sbjct: 245 NISQMPLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLG 304
Query: 63 ------YPSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQ 114
P + + + P+++ AL +V IS G H+ A T+ G LY++G N GQ
Sbjct: 305 LDDIRDLPKNTDNKPYQPFPQKVVALMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQ 364
Query: 115 VG 116
+G
Sbjct: 365 LG 366
Score = 66.6 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 33/171 (19%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS--------SGTDAN 71
P +D + + +A G H +A+ +G V+SWG + GQLG S G
Sbjct: 14 PLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQ 73
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I L + V+QI+ G H+ A TQDG LY+W G + P
Sbjct: 74 PTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSW----------GGGGCGQLGHPDTS 123
Query: 132 SWSEDFDS-------------QNIKVVDVACGSRHTLALCDDNSL--WGCG 167
+ +D D +N++V VACG HT+A+ ++ L WG G
Sbjct: 124 AMPKDEDGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAG 174
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 62 GYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
GYP P EI L G+ Q++ G H+ A G +Y+WG + GQ+G+
Sbjct: 7 GYPFQP-----HPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMK 61
Query: 122 DLVVH-DPHPMSWSEDFDS--QNIKVVDVACGSRHTLALCDDNSLW 164
DL + +P + Q++KV+ +ACG HT+AL D L+
Sbjct: 62 DLPTDVEGYPYQPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLY 107
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 13/162 (8%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P+ ++ +++ +A G HCLAL+ +G VFSWG G G+LG+ D+ P+ I
Sbjct: 4165 PTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLI 4222
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+LSG+GVV I+ G HSA T G + WG G++G D + P + +
Sbjct: 4223 ESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQL--QPKLVEALLGY 4280
Query: 138 DSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +D+ACGS TL + DD+++W G +Y +L G
Sbjct: 4281 -----RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4317
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L VT + CG +ALT+ G V++WG G +LG+ TD P+++
Sbjct: 4324 VPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGH--GNTDHVRRPKKVA 4381
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G ++ WG N+ GQ+G +G + + P +
Sbjct: 4382 ALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLG-DGTVS-AIQRPRLVQ-----S 4434
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 4435 LQGKHIVKVICGSAHTLAL 4453
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + D V +ACG L LT++G+VFSWG+G G+LG G++ P ++
Sbjct: 3210 PKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLG--RGGSEGCSIPHQV 3267
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G+GV+QI G S A T+ G ++ WG + ++G D V P P+
Sbjct: 3268 DRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLG--HGTDQHVRKPTPIQ----- 3320
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ KV+ VA G+ H LA+ D ++ G N++ Q G
Sbjct: 3321 GLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG 3360
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 14/166 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS-GTDANMEPREIRALSGLGVVQISAGG 92
+ CG H L +T+ G+ F+WG+G G+LG S GT P ++ VV++ +G
Sbjct: 720 LGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSV---PVQVDLPQASCVVKVFSGS 776
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
S A T++G +Y WG +GG++G G + H P P + K+VD+A G
Sbjct: 777 QFSVALTREGTVYTWGKGHGGRLG-HGNSE---HSPVPKMVQA---LEGKKIVDLAVGLA 829
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR--LSVPEHVK 196
H LAL L+G G N++ Q+ C V++ ++T L+ P ++
Sbjct: 830 HCLALTASGELYGWGRNDFQQICPEC-VTRDPIITAPILTTPPTLR 874
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 82/175 (46%), Gaps = 29/175 (16%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
P ++ VV +A G H +ALT +G VFSWG G G+LG+ G +E P+
Sbjct: 3104 PKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH---GNRLTLEKPKL 3160
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPM 131
I L + I+ G HSAA T G LY WG G++G + K LV
Sbjct: 3161 IETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTA----- 3215
Query: 132 SWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCGV 180
Q+ +VV VACGSR TL L +D ++ G ++ +L S GC +
Sbjct: 3216 -------LQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCSI 3263
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P ++D + V I CG LALT+ G V++WG G +LG+ GTD ++ +P I
Sbjct: 3263 IPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGH---GTDQHVRKPTPI 3319
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ ++ G H A T G +YAWG N+ GQ +G + +V+ + D
Sbjct: 3320 QGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQ---QGSGNTIVNKKPSLVLGLD- 3375
Query: 138 DSQNIKVVDVACGSRHTLA 156
I V VACGS H++A
Sbjct: 3376 ---GIFVNRVACGSSHSVA 3391
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P ++ + DIACG H A+T G +++WG G G+LG+ + T ++P+
Sbjct: 3154 TLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCT--QLKPK 3211
Query: 76 EIRALSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+ AL VVQ++ G + T+DG +++WG + G++G G + PH
Sbjct: 3212 LVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCSI--PH---- 3265
Query: 134 SEDFDSQN-IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D N + V+ + CG++ +LAL +W G +Y +L G
Sbjct: 3266 --QVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHG 3308
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P+ L IA G ++Q+G +++ G G+ G+LG G + N+ P+++
Sbjct: 3051 LPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGL---GHNNNVPTPKQV 3107
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
LS V V + +GG H+ A T DG +++WG G++G +L L P + E
Sbjct: 3108 PILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTL--EKPKLI---E 3162
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+ ++ +H
Sbjct: 3163 TLRTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDH 3219
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ + V DIACG H +T +G V +WG G G+LG+ S + ++P+
Sbjct: 4216 YDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDS--EDQLQPKL 4273
Query: 77 IRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ AL G + I+ +G + T D +++WG + G++G G V PM
Sbjct: 4274 VEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV----PMKIE 4329
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V V CGS+ ++AL S++ G +Y++L G
Sbjct: 4330 ---SLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4369
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 27 LDLVVTDIA--CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG 84
L+ + +A C H LAL G V+SWG+G G+LG+ T A P I AL+
Sbjct: 605 LECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGH--GDTSAKELPTRIAALADRQ 662
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V + G +SAA T G LY WG G++G D + + + +
Sbjct: 663 VTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNS-----EDKYVPTLVTALKAHRVVH 717
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLF 204
V + CG H+L + + + G ++ +L V SV ++ +P+ +C +VK+F
Sbjct: 718 VALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVG-TSVPVQVDLPQ--ASC-VVKVF 773
Query: 205 A 205
+
Sbjct: 774 S 774
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D V + G +ALT+EG V++WG G G+LG+ +S + + P+ ++
Sbjct: 757 VPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNS--EHSPVPKMVQ 814
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
AL G +V ++ G H A T G LY WG N+ Q+ E V DP
Sbjct: 815 ALEGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQICPE----CVTRDP 860
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+F WG+ RGQLG N P E ALS L +QI+ G A T DG LYA G+
Sbjct: 4091 IFGWGHNHRGQLGGLDGSRIKNPTPCE--ALSLLRPIQIAGGEQTLYAVTPDGKLYATGY 4148
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GG++GV G + + E IK V V G +H LAL D ++ G
Sbjct: 4149 GAGGRLGVGGTDSVTTP-----TLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEG 4203
Query: 170 EYNQLSMG 177
E +L G
Sbjct: 4204 EDGKLGHG 4211
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV--VQISAG 91
IA G A+T +G +++ G GTD+ P + +L + + V +++G
Sbjct: 4127 IAGGEQTLYAVTPDGKLYA--TGYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSG 4184
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
G H A + DG +++WG G++G G D S S I VVD+ACGS
Sbjct: 4185 GKHCLALSSDGEVFSWGEGEDGKLG-HGNRDSYDRPKLIESLS------GIGVVDIACGS 4237
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMG 177
H+ + + G Y +L G
Sbjct: 4238 AHSACITIQGHVLTWGKGRYGRLGHG 4263
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V WG + QLG G+ + P LS L + I+ G +QDG LYA G
Sbjct: 3030 VLVWGLNDKEQLG-GLKGSKVKL-PTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGE 3087
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
G++G+ ++ P+ +K V V G +H +AL D ++ G
Sbjct: 3088 GTNGRLGLGHNNNVPTPKQVPI-----LSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3142
Query: 170 EYNQLSMG 177
E +L G
Sbjct: 3143 EDGKLGHG 3150
>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 81/157 (51%), Gaps = 26/157 (16%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G H LAL ++GI+++WGN GQLG + T +P ++ LS L +V I+AGGW
Sbjct: 203 IAVGAFHNLALLEDGILWAWGNNEYGQLG--TGDTQPRSQPIAVQGLSDLTLVDIAAGGW 260
Query: 94 HSAARTQDGFLYAWGWNNGGQVG---------VEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
HS A T DG +Y WG G++G V K+ L+V + +
Sbjct: 261 HSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVEE---------------NI 305
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
V ++CG H++AL D ++ G ++ +L G V+
Sbjct: 306 VQISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVT 342
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 95/231 (41%), Gaps = 52/231 (22%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G + LA+ ++G +F+WG RG LG+P N+ P +++AL+ +VQ +
Sbjct: 41 VCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENI-PSQVKALANAKIVQAAI 99
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD---------------------------- 122
GGWH A G YAWG N GQ G E +
Sbjct: 100 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAA 159
Query: 123 ------LVVHDPHPMSWSEDFDSQNIKVVD-------------VACGSRHTLALCDDNSL 163
++ + H +W + + +IK + +A G+ H LAL +D L
Sbjct: 160 GGTHSVVLTREGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLEDGIL 219
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
W G NEY QL G ++ + + + +V + A W+S L+
Sbjct: 220 WAWGNNEYGQL----GTGDTQPRSQPIAVQGLSDLTLVDIAAGGWHSTALT 266
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P + DL + DIA G H ALT +G V+ WG G G+LG+ + M
Sbjct: 235 TQPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGF-GDDKSSKMV 293
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHD 127
P++++ L +VQIS GG HS A T+DG ++++G + G++G K +++ ++
Sbjct: 294 PQKVQLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPMEVPINL 353
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
P + S + VACG RHTLA+ +
Sbjct: 354 PPATNLSGSGAGGHWCSKLVACGGRHTLAIVE 385
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 62/133 (46%), Gaps = 26/133 (19%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPRE----IRALSGLGVVQISAGGWHSAARTQDGFLY 105
+ SWG+G GQLG N E +E ++AL+ V + AG +S A +DG L+
Sbjct: 8 IISWGSGEDGQLGI------GNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLF 61
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ-----NIKVVDVACGSRHTLALCDD 160
WGWN G +G H P +E+ SQ N K+V A G H LA+ D
Sbjct: 62 TWGWNQRGTLG---------HPPETK--TENIPSQVKALANAKIVQAAIGGWHCLAVDDQ 110
Query: 161 NSLWGCGWNEYNQ 173
+ G NEY Q
Sbjct: 111 GRAYAWGGNEYGQ 123
>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
Length = 628
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V T ++CG H +AL+ G ++SWG G+ G+ G+ S ++ P+ + AL G + ++
Sbjct: 185 VFTSVSCGAQHSMALSNYGELYSWGCGTGGRTGHGSEA--PSLSPQVVSALVGKQITSMA 242
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G HSAA G +Y WGWN GQ+G H +S ++ D + VV V C
Sbjct: 243 GGMLHSAATDLRGSVYTWGWNKYGQLGNN------TAKKH-LSPNKLRDMEKHHVVKVTC 295
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
G HT L + ++ G+N QL +G G + ++ +PEH
Sbjct: 296 GKNHTHLLTAEGHIYSFGFNVCGQLGVG-GYADSQQPKKVDLPEHA 340
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ V + CG +H LT EG ++S+G GQLG G + +P+++
Sbjct: 279 PNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGV--GGYADSQQPKKVDL 336
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM-------- 131
V I +G +H+ T G +Y+WG+ + G +G+ D+ H P
Sbjct: 337 PEH--AVDIVSGYYHTLCLTNKGNVYSWGYMSDGALGLG---DIAGHQSKPKLIPLSHIR 391
Query: 132 -SWSEDFDSQN 141
++S+ DS N
Sbjct: 392 HNYSDSMDSYN 402
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSG--LGVVQISAGGWHSAARTQDGF-LYA 106
++SWG GQ S+ P + L L V+ +++G H A G +YA
Sbjct: 98 IYSWGYNYFGQCA--SNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYA 155
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--W 164
WG N GQ+G + + P ++ F S V+CG++H++AL + L W
Sbjct: 156 WGCNRWGQLGTGDQTNRATPTPIAIATPTVFTS-------VSCGAQHSMALSNYGELYSW 208
Query: 165 GCG 167
GCG
Sbjct: 209 GCG 211
>gi|340507220|gb|EGR33218.1| hypothetical protein IMG5_058940 [Ichthyophthirius multifiliis]
Length = 660
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 77/153 (50%), Gaps = 17/153 (11%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+ V +ACG H LALT+ V++WG ++G +P I L+ GV I
Sbjct: 147 IKVLQVACGDYHTLALTENDQVYAWGGTLYKKVGQRGG------KPGPIHQLTNKGVTYI 200
Query: 89 SAGGWHSAARTQDGFLYAWG----WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
G +HS A T G +Y WG + N GQ+G+ D+ + P + + +N KV
Sbjct: 201 DCGDFHSVAITNQGDIYTWGGGGQFQNKGQLGLGHMKDIEI--PEQIQFF-----KNKKV 253
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V+CG HT+AL DDN L+G G E +L G
Sbjct: 254 IKVSCGQFHTMALIDDNQLYGWGAGELGELGSG 286
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG----SRGQLGYPSSGTDANME-P 74
P + + VT I CG H +A+T +G +++WG G ++GQLG G ++E P
Sbjct: 186 PGPIHQLTNKGVTYIDCGDFHSVAITNQGDIYTWGGGGQFQNKGQLGL---GHMKDIEIP 242
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW- 133
+I+ V+++S G +H+ A D LY WG G++G GK+ ++ +
Sbjct: 243 EQIQFFKNKKVIKVSCGQFHTMALIDDNQLYGWGAGELGELG-SGKVLYFLYLLIILILK 301
Query: 134 ------SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
++ ++ ++ D+ CG HTL L + ++ G+ Y QL +
Sbjct: 302 KYITINKNNYYKKDPQISDIKCGGHHTLILLNIGYVYSTGYGSYGQLGL 350
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG--------------- 62
+P ++ F + V ++CG H +AL + ++ WG G G+LG
Sbjct: 240 EIPEQIQFFKNKKVIKVSCGQFHTMALIDDNQLYGWGAGELGELGSGKVLYFLYLLIILI 299
Query: 63 -YPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
+ N ++ +S I GG H+ G++Y+ G+ + GQ+G++
Sbjct: 300 LKKYITINKNNYYKKDPQIS-----DIKCGGHHTLILLNIGYVYSTGYGSYGQLGLKTTN 354
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ H + W+ K++ +A G H+L L D N ++ CG+N + QL +G
Sbjct: 355 N---HCEFQLVWT----LTKKKIIKIAAGWNHSLVLTDTNDVFSCGYNAWGQLGLG 403
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V++WG G+L + + +P + L + + QIS HS+ + +G LY G
Sbjct: 60 VYAWGKNEYGELSFSQTKQQFYSKPENPKNLEKIYIKQISTSQNHSSCVSSNGDLYVCGS 119
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
G++G+E +L + + + + IKV+ VACG HTLAL +++ ++ G
Sbjct: 120 ALHGKLGLE---NLTMANINKFQILTAL--KGIKVLQVACGDYHTLALTENDQVYAWGGT 174
Query: 170 EYNQL 174
Y ++
Sbjct: 175 LYKKV 179
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IA G++H L LT VFS G + GQLG ++ I AL+G VV+ISA
Sbjct: 370 IIKIAAGWNHSLVLTDTNDVFSCGYNAWGQLGLGDE--ESRTLFTHISALAGKNVVEISA 427
Query: 91 GGWHSAARTQDGF 103
GG HS A + F
Sbjct: 428 GGSHSWAILEQQF 440
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + + +T +A G +H LA++ +G V+SWG RGQLG ++ + ++ PR
Sbjct: 3209 VPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHT-PRV 3267
Query: 77 IRALSGLGVVQISAGGWH-SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I +L + +A +H SA + +G L +G N+ GQ+G LD H H E
Sbjct: 3268 IESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLG----LDHTQHQ-HTPQLVE 3322
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
SQ KV VACG HT+A+ DD ++ G NEY QL +
Sbjct: 3323 TLSSQ--KVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLS 3362
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G +H +A+T G+ +SWG RGQLG+ + GT + P+ I ++ + + HSA
Sbjct: 444 GCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYL-PKLIESIKEKKMKSAAVSYHHSA 502
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK------VVDVACG 150
+ G LY +G N+ GQ+G LD H P Q +K V V+CG
Sbjct: 503 LVSVSGELYTFGMNDCGQLG----LDHTQHQSTP---------QLVKALLGHHVSMVSCG 549
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
H + ++ CG N++ QL +G QV V T++ +P +
Sbjct: 550 LYHMVLCTISGEVFTCGKNDHGQLGLGHN-KQVKVPTQVVLPNEL 593
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V+ ++CG H + T G VF+ G GQLG G + ++ L V ++
Sbjct: 543 VSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGL---GHNKQVKVPTQVVLPNELVCFVAC 599
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +H+ A T G Y++G N+ GQ+G+ K +H P++ + S N ++V ACG
Sbjct: 600 GYYHATAITSTGLTYSFGRNDYGQLGIGSK----IHQNIPIALT---ISSNTRMVHAACG 652
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL-SMGCGVSQVSVMTRLSVPEHVKNC 198
HTL + D ++ G N QL + G S + V ++ ++++ C
Sbjct: 653 CYHTLLMSDSGQVFVFGRNNKGQLGNRGNTDSLLPVPLKVRPEKNMRRC 701
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANM---- 72
H P ++ V +ACG H +A+ +G V+S+G GQLG + T M
Sbjct: 3316 HTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNTKVPMLVKI 3375
Query: 73 --EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
PR + VQ+ G +H+ + G + WG N+ GQ+G+ K + P
Sbjct: 3376 PPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQFVP 3435
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + +V +CG HTL L + G N QL +
Sbjct: 3436 LPLTS-------RVKRASCGCYHTLLLLVNGRPMVFGRNNKGQLGVA 3475
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+V +ACG+ H A+T G+ +S+G GQLG S N+ P + S +V +
Sbjct: 593 LVCFVACGYYHATAITSTGLTYSFGRNDYGQLGI-GSKIHQNI-PIALTISSNTRMVHAA 650
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
G +H+ + G ++ +G NN GQ+G G D ++ P
Sbjct: 651 CGCYHTLLMSDSGQVFVFGRNNKGQLGNRGNTDSLLPVP 689
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 10/139 (7%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
+E +FS G + G+L +E S + I+ G +DG ++
Sbjct: 3131 EECEIFSCGQNNYGELCLGHCNPTNKLERASF--FSYKSIQSIAGGNEVLVVLMKDGAVF 3188
Query: 106 AWGWNNGGQVGVEGKLD--LVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
G N GQ G+ G D L+V P P I +V + G H LA+ D ++
Sbjct: 3189 TCGLNKSGQCGI-GNFDERLIVPSPIPA-----LSGIPITMVAASNGCEHMLAISHDGAV 3242
Query: 164 WGCGWNEYNQLSMGCGVSQ 182
+ G+N+ QL +G VS+
Sbjct: 3243 YSWGYNDRGQLGLGTTVSK 3261
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 36 CGFDHCLA----------LTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV 85
CG+DH LT +G+V + G GQ G+ + + M R I+AL V
Sbjct: 378 CGWDHIRQVVSGNEILAILTSDGVVLTCGLNKSGQCGH-GNFDERVMLLRPIQALRSHRV 436
Query: 86 VQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEG 119
I+A G H A T G Y+WG+N+ GQ+G E
Sbjct: 437 KYINASNGCEHLIAITDTGLAYSWGYNDRGQLGHEN 472
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG LALT++G VFSWG+G G+LG G++ + P EI LSG+GVVQI
Sbjct: 3105 VIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG--RGGSEGSATPHEIERLSGIGVVQI 3162
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D V P P++ + +V+ VA
Sbjct: 3163 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIA-----GLRGRRVIHVA 3215
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H LA+ D ++ G N++ Q G
Sbjct: 3216 VGALHCLAVTDAGQVYAWGDNDHGQQGSG 3244
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L V + CG +ALT+ G V++WG G +LG+ S D P+++
Sbjct: 4305 LPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS--VDHVRRPKKVA 4362
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G +Y WG N+ GQ+G +G + + P ++
Sbjct: 4363 ALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG-DGTVT-AIQRPRLVA-----A 4415
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 4416 LQGKHIVKVTCGSAHTLAL 4434
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H A++ +G +++WG G G+LG+ + T ++P+ + AL G V+Q++
Sbjct: 3053 IRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNAT--QLKPKLVTALCGSRVIQVAC 3110
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T+DG +++WG + G++G G PH E I VV +
Sbjct: 3111 GSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSAT--PH-----EIERLSGIGVVQIE 3163
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG++ +LAL +W G +Y +L G
Sbjct: 3164 CGAQFSLALTRAGEVWTWGKGDYYRLGHG 3192
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P ++ VV +A G H LALT +G VFSWG G G+LG+ + T +PR
Sbjct: 2987 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLD--KPRL 3044
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL + I+ G HSAA + G LY WG G++G H +
Sbjct: 3045 VEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLG---------HGDNATQLKPK 3095
Query: 137 FDSQ--NIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+ +V+ VACGSR TLAL +D +++ G ++ +L G
Sbjct: 3096 LVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3140
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ + + V +A G HCLALT +G V++WG G G+LG+ G + + P+
Sbjct: 4145 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH---GNRLSYDRPK 4201
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L+G+ V I+ G HSAA T G + WG G++G D + P +
Sbjct: 4202 LLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALL 4259
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + +D+ACGS TL + DD+++W G +Y +L G
Sbjct: 4260 GY-----RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4298
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 95/239 (39%), Gaps = 63/239 (26%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS---------- 66
+ P ++H + V DIACG H A+T G V +WG G G+LG+ S
Sbjct: 4197 YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 4256
Query: 67 ------------------------------------------GTDANMEPREIRALSGLG 84
G+D P +I +L+GLG
Sbjct: 4257 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 4316
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+++ G S A T+ G +Y WG + ++G G +D H P + Q K+
Sbjct: 4317 VIKVECGSQFSVALTKSGAVYTWGKGDFHRLG-HGSVD---HVRRPKKVAA---LQGKKI 4369
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
+ +A GS H +A D ++ G N+ QL G V+ + R + ++ IVK+
Sbjct: 4370 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGT----VTAIQRPRLVAALQGKHIVKV 4424
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V I CG LALT+ G V++WG G +LG+ G +P+ I
Sbjct: 3148 PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH--GGDQHVRKPQPIAG 3205
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWS 134
L G V+ ++ G H A T G +YAWG N+ GQ G V K LV+
Sbjct: 3206 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI--------- 3256
Query: 135 EDFDSQNIKVVDVACGSRHTLA 156
D+ + V VACGS H++A
Sbjct: 3257 -GLDA--VFVNRVACGSSHSMA 3275
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 17/161 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ + D V D+A G H L LT EG+V++WG+G G+LG ++ +++++P
Sbjct: 734 LPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLG--NASCNSSLQPLL 791
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN--GGQVGVEGKLDLVVHDPHPMSWS 134
I L V ++ AG S A T +G LY+WG + G Q LV + S
Sbjct: 792 IECLP--RVQRVFAGSQFSLALTGEGQLYSWGKASCLGHQ--------LVERNVQGCSVP 841
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
S Q+ ++VDVA G H LAL ++G G N+ Q+
Sbjct: 842 RLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI 882
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGV--VQISA 90
IA G ++Q+G VF+ G G+ G+LG G N+ P ++ L V V + +
Sbjct: 2950 IAGGSKSLFVVSQDGKVFACGEGTNGRLGL---GVTHNVPLPHQLPVLHQYVVKKVAVHS 3006
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A T DG +++WG G++G + L P + E ++ I+ D+ACG
Sbjct: 3007 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL--DKPRLV---EALRAKKIR--DIACG 3059
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S H+ A+ L+ G EY +L G +Q+
Sbjct: 3060 SSHSAAISSQGELYTWGLGEYGRLGHGDNATQLK 3093
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 36 CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHS 95
C H LA+ +SWG G +LG+ + P +I +L V + G +S
Sbjct: 648 CEGRHFLAVDNNFNAYSWGTGDNRRLGH--GDCHSRELPTKIESLVR-RVKSVYCGCSYS 704
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T G LY WG N G++G G D M+ + +VVDVA GS H
Sbjct: 705 AAITLRGNLYTWGRGNYGRLG-HGISDDQCLPTMVMALKDH------QVVDVALGSGDAH 757
Query: 154 TLALCDDNSLWGCGWNEYNQL 174
TL L ++ ++ G +Y +L
Sbjct: 758 TLCLTNEGLVYAWGDGDYGKL 778
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 21/174 (12%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ RGQLG P E ALS L VQ++ G A T DG L+A G+
Sbjct: 4072 IYGWGHNHRGQLGGLEGSRIKTPTPCE--ALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4129
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWS-----EDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
+GG++GV G SWS +K V V G +H LAL D ++
Sbjct: 4130 GSGGRLGVGGS----------DSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVY 4179
Query: 165 GCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEH 218
G E +L G +S R + EH+ + + +SA ++ H
Sbjct: 4180 AWGEGEDGKLGHGNRLS----YDRPKLLEHLNGMSVADIACGSAHSAAITASGH 4229
>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
Length = 1239
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 14/152 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA G D LAL +G V+SWG + G+LG + T + P ++ L+ V I+A
Sbjct: 856 VVAIAAGKDFSLALKSDGTVWSWGQNTYGELG--NGTTTRSSVPVQVALLTD--VKAIAA 911
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +H A +DG ++AWG+N G++G + +S S S + +A G
Sbjct: 912 GDYHGVALKKDGSVFAWGYNGNGELG----------NSSTISQSTPVQSGVTGIKGIAAG 961
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
HTLAL D ++W G+N Y QL G S+
Sbjct: 962 PYHTLALKSDGTVWSWGYNGYGQLGNGNNTSR 993
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
+H + + +G V+ WG GQLG +S + + P ++ L+G+ + I+ G H+ A
Sbjct: 714 NHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTS--VPGKVINLTGMKM--IAGGENHTVAL 769
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
DG L+ WG+N GQ+G D +S S V+ G H+LAL
Sbjct: 770 RSDGTLHTWGYNGYGQLG---------DDSTTTRYSPVQVSTLTNWTAVSAGENHSLALK 820
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQ 182
D ++W G+N Y QL G SQ
Sbjct: 821 SDGTVWAFGYNGYGQLGDGTTSSQ 844
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 79/173 (45%), Gaps = 22/173 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G +H +AL +G + +WG GQLG S+ T P ++ L+ V SAG
Sbjct: 759 IAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTT--RYSPVQVSTLTNWTAV--SAGEN 814
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSR 152
HS A DG ++A+G+N GQ+G D S +++ VV +A G
Sbjct: 815 HSLALKSDGTVWAFGYNGYGQLG----------DGTTSSQRTPVQVKDLTGVVAIAAGKD 864
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
+LAL D ++W G N Y +L G TR SVP V VK A
Sbjct: 865 FSLALKSDGTVWSWGQNTYGELGNG-------TTTRSSVPVQVALLTDVKAIA 910
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/101 (39%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RALSGLG-VVQI 88
+ IA G H LAL +G V+SWG GQLG + N R + A+ GL + I
Sbjct: 955 IKGIAAGPYHTLALKSDGTVWSWGYNGYGQLG------NGNNTSRSVPAAIPGLASIASI 1008
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+AG S A DG LY+WG N GQ+G +D V PH
Sbjct: 1009 AAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNV--PH 1047
Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 23/102 (22%)
Query: 81 SGLGVVQISAG--GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+ LG V ++ G H+ DG ++ WG+N GQ+G + + +
Sbjct: 700 AALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLG---------------TGTSNST 744
Query: 139 SQNIKVVD------VACGSRHTLALCDDNSLWGCGWNEYNQL 174
S KV++ +A G HT+AL D +L G+N Y QL
Sbjct: 745 SVPGKVINLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQL 786
>gi|222625331|gb|EEE59463.1| hypothetical protein OsJ_11655 [Oryza sativa Japonica Group]
Length = 581
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 20/173 (11%)
Query: 14 SQVFHMPSR-MDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDA 70
++V + +R +D +LV + ++CG H A+++ G V++WG GS GQLG+ S D
Sbjct: 311 ARVLNAYARFLDEAPELVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDK 370
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHD 127
+ PR + AL + +S GG HS A T+DG LYAWG + GQ+G+ G ++
Sbjct: 371 ELIPRRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGFFSCALN- 429
Query: 128 PHPMSWSEDFDSQNIKVVD-------VACGSRHTLALCDDNSLWGCGWNEYNQ 173
D +NI V+ V CG HTL D+ ++G G+N Y Q
Sbjct: 430 ------GSDMLLRNIPVLVIPSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYGQ 476
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 41/214 (19%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQISAG 91
D+ACG H A+ +G +++WG GQLG GT+ + EP++++AL V +S G
Sbjct: 140 DVACGRGHTAAVASDGSLYTWGANDFGQLG---DGTEESAKEPQKVKALETEFVKSVSCG 196
Query: 92 GWHSAA----RTQDGF-----LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED------ 136
+AA R +G L+ WG N G +L P+ S + +
Sbjct: 197 AHCTAAVAEPRENNGTISRSRLWVWGQNQGSDY---PRLFWGAFAPNTASGATEQSTITC 253
Query: 137 -------FDSQNIKVV-DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC------GVSQ 182
+++V+ V+CG+ H +AL +D L G+NEY QL GC G
Sbjct: 254 ASSQFLSLRCLSLEVIHQVSCGAVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARV 313
Query: 183 VSVMTRL--SVPEHVKNCPIVKLFAEHWNSARLS 214
++ R PE VK IV++ +++A +S
Sbjct: 314 LNAYARFLDEAPELVK---IVRVSCGEYHTAAIS 344
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDA----NMEPREI-RALSG 82
V+ ++CG H +AL+++G++ +WG GQLG S G N R + A
Sbjct: 268 VIHQVSCGAVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPEL 327
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG----VEGKLDLVVHDPHPMSWSEDFD 138
+ +V++S G +H+AA +++G +Y WG + GQ+G G +L+ P + D
Sbjct: 328 VKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELI---PRRVV---ALD 381
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I+ DV+CG H+ A+ +D +L+ G QL +G
Sbjct: 382 RTVIR--DVSCGGVHSCAVTEDGALYAWGGGHVGQLGLG 418
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 16/153 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSG------TDAN 71
+P R+ V+ D++CG H A+T++G +++WG G GQLG P SG ++
Sbjct: 373 IPRRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGFFSCALNGSD 432
Query: 72 MEPREIRALS-GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
M R I L GV ++ G H+ +D +Y WG+N+ GQ E P P
Sbjct: 433 MLLRNIPVLVIPSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYGQAANEK--STYAWFPSP 490
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ W +V +A G H+ L D SL
Sbjct: 491 VDWCVG------EVRRLAAGGGHSAVLTDACSL 517
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GG A +Y WG+N+ GQ +GK L + P + D +N++ +DVAC
Sbjct: 84 GGLRVAGVPTKSAIYLWGYNHSGQTARKGKECHLRIPKSLPPKLFKWQDGKNLRWIDVAC 143
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G HT A+ D SL+ G N++ QL G
Sbjct: 144 GRGHTAAVASDGSLYTWGANDFGQLGDG 171
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG----VEGK 120
S+ T A+ + +R LS + Q+S G H A ++DG L AWG+N GQ+G EG
Sbjct: 249 STITCASSQFLSLRCLSLEVIHQVSCGAVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGL 308
Query: 121 LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V + + E + +K+V V+CG HT A+ ++ ++ G QL
Sbjct: 309 QGARVLNAYARFLDE--APELVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQL 360
>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1279
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 33/205 (16%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
AS P ++ SQ F + I+ G H LA+ +G ++WG GQLG
Sbjct: 1003 YASNPARLPSQSFQ------------ASQISAGSWHALAIDTDGNTWTWGYNGYGQLG-- 1048
Query: 65 SSGTDANMEPREIRALS----GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
T +P+ ++ + L QISAG HS +DG L+AWGWN+ GQ+G+
Sbjct: 1049 DGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLWAWGWNSNGQLGIGNT 1108
Query: 121 LD----LVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
++ + DP +Q K V + G H+LA+ D +LW G N+Y QL
Sbjct: 1109 VNQTKPATIKDPA-------NKAQTFKAVRSSAGQLHSLAIRQDGNLWAWGDNQYGQL-- 1159
Query: 177 GCGVSQVSVMTRLSVPEHVKNCPIV 201
G +Q + +P P+V
Sbjct: 1160 --GNNQTATRNTTPMPVAFDPTPLV 1182
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS-GTDANMEPREIRALSGLGVVQISAGG 92
++ + +AL +G V++WG + GQLG +S T P + + S QISAG
Sbjct: 966 VSLNWSFVMALDADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQS-FQASQISAGS 1024
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
WH+ A DG + WG+N GQ+G D + P + D SQ++K ++ G
Sbjct: 1025 WHALAIDTDGNTWTWGYNGYGQLGDGSTSDK--YKPQTVQNPTDT-SQSLKATQISAGVD 1081
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
H+L + D SLW GWN QL +G V+Q T
Sbjct: 1082 HSLVVDRDGSLWAWGWNSNGQLGIGNTVNQTKPAT 1116
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGV-- 85
+ + ++ G H LA+ +G ++SWG+ GQLG GT A EP ++ G+
Sbjct: 234 IRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLG---DGTTAERHEPVPVKKPQGVSQDF 290
Query: 86 --VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
VQ SAG S DG LY+WG N GQ+G + P P++ ++ S
Sbjct: 291 TWVQASAGYLFSVGLGSDGKLYSWGDNTYGQLG--NNTTTAHYTPEPVNLPQNAPS-GFT 347
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
A GS H L L D +L+ G N++NQL G
Sbjct: 348 WKQEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGT 382
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 69/166 (41%), Gaps = 2/166 (1%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
T +A G H LA+ GIV+SWG GQLG ++ N +P + VQ+
Sbjct: 850 FTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQV 909
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
SAG SAA + +Y WG + G+ G +P P + D Q + V V+
Sbjct: 910 SAGVADSAAIDSENRVYTWGSESTGK-GQTPAYSTTRKNPTPAA-DPDNPGQTLHAVQVS 967
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
+AL D +++ G+N QL G S +P
Sbjct: 968 LNWSFVMALDADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQ 1013
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR------ALSGLGVVQ 87
++ G + + +G ++WGN GQL + D +M+ +R A S Q
Sbjct: 797 VSAGGSFSIGVASDGNAYAWGNNKYGQLAQKPA--DVSMQKTPVRIPLPDGADSSFTYTQ 854
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++AG H A +G +Y+WG N+ GQ+G D ++P P+ +D Q K V V
Sbjct: 855 VAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDR--YNPQPV---KDTGGQPFKAVQV 909
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR 188
+ G + A+ +N ++ G S G G + TR
Sbjct: 910 SAGVADSAAIDSENRVYTWG-----SESTGKGQTPAYSTTR 945
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 25/180 (13%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI--RALSGLGV 85
D + G+ + L +G ++SWG+ + GQLG ++ EP + A SG
Sbjct: 289 DFTWVQASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTW 348
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVG----------VEGKLDLVVHDPHPMSWSE 135
Q + G H+ DG LY+WG N+ Q+G ++ K+ V P +W +
Sbjct: 349 KQEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGV--PSGFAWKQ 406
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
++ H+LAL DN ++G G N ++ G R++ P+ V
Sbjct: 407 -----------MSGWGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGV 455
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
GT + P R G+ Q+SAG H A DG LY+WG N+ GQ+G + H
Sbjct: 221 GTKVTLTPPGPR---GIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAER--H 275
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+P P+ + SQ+ V + G ++ L D L+ G N Y QL
Sbjct: 276 EPVPVKKPQGV-SQDFTWVQASAGYLFSVGLGSDGKLYSWGDNTYGQL 322
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV----QISAGGWHS 95
H LAL + ++ WG +RG++G S TD + P I G+ Q G ++S
Sbjct: 413 HSLALGSDNWIYGWGANTRGEVGT-GSITDNKITPVRIATPQGVPSNFTWGQFQMGDYYS 471
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLV----VHDPHPMSWSEDFDSQNIKVVDVACGS 151
A DG +Y WG+ G VG +D+ H P+ + +F + + ++ VA
Sbjct: 472 QAIGSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGV--LPNFSWKQVSLLSVAS-- 527
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
LA+ D +L+ G N QL +Q + R++ P++
Sbjct: 528 ---LAIGSDGNLYSWGANNNGQLGDNT-TTQRNTPIRVAAPQNA 567
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 41 CLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR---EIRALSGLGVVQISAGGW--HS 95
LA+ +G ++SWG + GQLG ++ T N R A +GL VQ SAG W +S
Sbjct: 527 SLAIGSDGNLYSWGANNNGQLGD-NTTTQRNTPIRVAAPQNAPTGLTWVQASAG-WDNNS 584
Query: 96 AARTQDGFLYAWGWNNGGQVG 116
DG LY+WG N GQ+G
Sbjct: 585 FGLASDGNLYSWGKNANGQLG 605
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G+ Q+SAGG S DG YAWG N GQ+ + + P + + DS +
Sbjct: 791 GIRFDQVSAGGSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQKTPVRIPLPDGADS-S 849
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
VA G H LA+ + ++ G N++ QL G + + P+ VK+
Sbjct: 850 FTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYN-------PQPVKDT 899
>gi|401837583|gb|EJT41494.1| SRM1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 482
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ P ++ F + +A G DH L L +EG+VF+WGNG + QLG ME
Sbjct: 207 KIQTTPWKLPTFSKFNIVQLAPGKDHVLFLDEEGMVFAWGNGQQNQLGRKV------MER 260
Query: 75 REIRALS----GLGVVQ-ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD--LVVHD 127
++ L GL V+ I++G H A T+D L +WG N GQ GV ++ +V
Sbjct: 261 FRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSENVEDGALVTK 320
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
P + ED + V +A G H+L LC D L+ CG + G S + T
Sbjct: 321 PKKLPLPED-----VIVRSIAAGEHHSLILCQDGDLYSCG--RLDMFEAGIPKSDLPEYT 373
Query: 188 R---------LSVPEHVKNCPIVKLFA 205
+ +P +KN P K A
Sbjct: 374 YNDVHGKARAIPLPTKLKNVPKFKAVA 400
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 30/205 (14%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTD-IACGFDHCLALTQEGIVFSWGNG--SRG 59
+ L S P K+ F ++ + L TD ++C AL G V++WG + G
Sbjct: 144 NELESTPAKIPRDCFPPLTKGHKIVQLGATDNMSC------ALFSNGEVYAWGTFRCNEG 197
Query: 60 QLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--V 117
LG+ P ++ S +VQ++ G H ++G ++AWG Q+G V
Sbjct: 198 ILGFYQEKIKIQTTPWKLPTFSKFNIVQLAPGKDHVLFLDEEGMVFAWGNGQQNQLGRKV 257
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ L DP P F +++K +A G H AL DN L G N++ Q
Sbjct: 258 MERFRLKTLDPRP------FGLRHVKY--IASGENHCFALTKDNKLVSWGLNQFGQ---- 305
Query: 178 CGVSQ-------VSVMTRLSVPEHV 195
CGVS+ V+ +L +PE V
Sbjct: 306 CGVSENVEDGALVTKPKKLPLPEDV 330
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM--EPREIRALSGLGVVQI 88
V IA G +HC ALT++ + SWG GQ G + D + +P+++ + V I
Sbjct: 276 VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSENVEDGALVTKPKKLPLPEDVIVRSI 335
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL---VVHDPHPMSWSEDFDSQ--NI- 142
+AG HS QDG LY+ G + + G+ K DL +D H + + ++ N+
Sbjct: 336 AAGEHHSLILCQDGDLYSCGRLDMFEAGIP-KSDLPEYTYNDVHGKARAIPLPTKLKNVP 394
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
K VA GS H++A+ + + G+ E + +G V TR+
Sbjct: 395 KFKAVAAGSHHSIAVAQNGIAYSWGFGETYAVGLGPSEDDTEVPTRIK 442
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG------TDANME 73
P ++ D++V IA G H L L Q+G ++S G + G P S D + +
Sbjct: 321 PKKLPLPEDVIVRSIAAGEHHSLILCQDGDLYSCGRLDMFEAGIPKSDLPEYTYNDVHGK 380
Query: 74 PREIRALSGLGVV----QISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
R I + L V ++AG HS A Q+G Y+WG+ VG+
Sbjct: 381 ARAIPLPTKLKNVPKFKAVAAGSHHSIAVAQNGIAYSWGFGETYAVGL 428
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 82/206 (39%), Gaps = 40/206 (19%)
Query: 1 MCDHLASGPLKMLSQVFHMPSRMDHFL---DLVVTDIACGFDHCLALTQEGIVFSWGNGS 57
MC+ L GPL +V R++ FL ++ + A G H LAL ++ V+SWG
Sbjct: 56 MCE-LGLGPLAKNKEVKR--PRLNPFLPRDEVKIISFAVGGMHTLALDEDSNVWSWGCND 112
Query: 58 RGQLGYPSSGTDANMEPREIRALS---------------------------GLGVVQISA 90
G LG +S ++ + LS G +VQ+ A
Sbjct: 113 VGALGRDTSNAKEQLKDMDASDLSDDEDGDLNELESTPAKIPRDCFPPLTKGHKIVQLGA 172
Query: 91 GGWHSAARTQDGFLYAWGWN--NGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
S A +G +YAWG N G +G + + P + F+ +V +A
Sbjct: 173 TDNMSCALFSNGEVYAWGTFRCNEGILGFYQEKIKIQTTPWKLPTFSKFN-----IVQLA 227
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
G H L L ++ ++ G + NQL
Sbjct: 228 PGKDHVLFLDEEGMVFAWGNGQQNQL 253
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 38 FDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR--EIRALSGLGVVQISAGGWH 94
+ H Q +F WG GS +LG P + PR + ++ + GG H
Sbjct: 36 YRHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEVKIISFAVGGMH 95
Query: 95 SAARTQDGFLYAWGWNNGGQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIK 143
+ A +D +++WG N+ G +G + K L D +S ED D ++
Sbjct: 96 TLALDEDSNVWSWGCNDVGALGRDTSNAKEQLKDMDASDLSDDEDGDLNELE 147
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L +V I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVIVTI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G ++ WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 ACGQMCSMAVVDTGEVFVWGYNGNGQLG----LGSSGNQPTPCRIAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H + T EG VF+WG+ + QLG + T+ + P I LS V++++ G +HS
Sbjct: 110 HVVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG ++AWG+NN GQVG + P P + QN +V +ACG ++A+
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVTGCL--QNKVIVTIACGQMCSMAVV 221
Query: 159 DDNSLWGCGWNEYNQLSMG 177
D ++ G+N QL +G
Sbjct: 222 DTGEVFVWGYNGNGQLGLG 240
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + V+ IACG +A+ G VF WG GQLG SSG P I
Sbjct: 194 IPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQPT--PCRI 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+V+++ AC S HT A
Sbjct: 309 -----RVIEIAACHSAHTSA 323
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVV 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ V++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 342
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR++ +LSG
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDIQSTIEPRKLDSLSGK 98
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 99 KIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 152
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G +Q +P V C
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-------PIPRRVTGC 201
>gi|170579740|ref|XP_001894963.1| hypothetical protein [Brugia malayi]
gi|158598260|gb|EDP36189.1| conserved hypothetical protein [Brugia malayi]
Length = 311
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + ++ G +H L LT G+V+S G GSRG LG+ + P+++ LS L V Q
Sbjct: 176 DEPILQLSAGNEHVLILTVSGLVYSMGIGSRGVLGH--ANLRCEXHPKQVGCLSPLRVTQ 233
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
++ G WHSAA T+DG +Y WGWNN GQ+G ++ ++ P P+ E
Sbjct: 234 VACGKWHSAALTEDGDVYLWGWNNFGQLGDCCEVGEILDIPTPLDILE 281
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
++Q+SAG H T G +Y+ G + G +G L H S ++V
Sbjct: 179 ILQLSAGNEHVLILTVSGLVYSMGIGSRGVLG-HANLRCEXHPKQVGCLSP------LRV 231
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLF 204
VACG H+ AL +D ++ GWN + QL C V ++ L +P + I+
Sbjct: 232 TQVACGKWHSAALTEDGDVYLWGWNNFGQLGDCCEVGEI-----LDIPTPLDILEIIVQI 286
Query: 205 AEHWNSARLSVPEH 218
+ + N+ L +H
Sbjct: 287 SAYGNATWLKRSDH 300
>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
Length = 1024
Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 16/148 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG +PS+ T P+ + L+G+ +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTT-----PQIVEHLAGVPLA 194
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QISAG HS A + G +Y+WG N GQ+G L +P S E D+Q ++
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLG----LGHTESKDYP-SLIEALDNQEVEF-- 247
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ACG H+ L D L+ G ++ QL
Sbjct: 248 LACGGSHSALLTQDGLLFTFGAGKHGQL 275
Score = 70.5 bits (171), Expect = 6e-10, Method: Composition-based stats.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG T++ P I A
Sbjct: 182 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGL--GHTESKDYPSLIEA 239
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG HSA TQDG L+ +G GQ+G + + P +E +
Sbjct: 240 LDNQEVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQN----ELRPCLVAELVGN 295
Query: 140 QNIKVVDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMGCGVSQ-VSVMTRLSVPEHVK 196
+V +ACG HTLA D ++ G + QL G Q + + ++S E +K
Sbjct: 296 ---RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVKVSSSEELK 351
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q K++ + CG H+LAL L+ G N + QL +G + T + EH+ P
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG---RKFPSTTTPQIVEHLAGVP 192
Query: 200 IVKLFAEHWNSARLSV 215
+ ++ A +S LS+
Sbjct: 193 LAQISAGEAHSMALSM 208
>gi|259490348|ref|NP_001159191.1| uncharacterized protein LOC100304276 [Zea mays]
gi|223942555|gb|ACN25361.1| unknown [Zea mays]
gi|414871691|tpg|DAA50248.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 480
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
Query: 25 HFLD-----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIR 78
FLD + + ++CG H A+++ G V++WG GS GQLG+ S D + PR +
Sbjct: 217 RFLDDAPEQVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRRVV 276
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ V +S GG HS A T+ G LYAWG + GQ+GV + + D
Sbjct: 277 ALDGIVVGDVSCGGVHSCAVTEGGALYAWGGGHVGQLGVGPQGGFFSCSLN----GSDML 332
Query: 139 SQNIKVVDV-------ACGSRHTLALCDDNSLWGCGWNEYNQLS 175
+NI V+ + CG HTL D ++G G+N Y Q +
Sbjct: 333 LRNIPVLVIPSGVRLATCGHSHTLVSMKDGRIYGWGYNSYGQAT 376
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 37/200 (18%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG 91
TDIACG +H A+ +G +F+WG GQLG + D+ EP+++++L V +S G
Sbjct: 63 TDIACGREHTAAVASDGSLFTWGANEFGQLGDGTE--DSAKEPKKVKSLETEFVKSVSCG 120
Query: 92 GWHSAA----RTQDGF-----LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+AA R DG L+ WG N G +P + F + N
Sbjct: 121 AHCTAAVAEPRENDGTVSKSRLWVWGQNQG--------------SDYPRLFWGAF-TPNT 165
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG------CGVSQVSVMTRL--SVPEH 194
+ V+CG+ H +AL +D L G+NEY QL G G ++ R PE
Sbjct: 166 VIKQVSCGAVHVMALSEDGLLQAWGYNEYGQLGRGRTSQGLQGARVLNAYARFLDDAPEQ 225
Query: 195 VKNCPIVKLFAEHWNSARLS 214
VK IV++ +++A +S
Sbjct: 226 VK---IVRVSCGEYHTAAIS 242
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 19/161 (11%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQL--GYPSSGTDA----NMEPREI-RAL 80
+ V+ ++CG H +AL+++G++ +WG GQL G S G N R + A
Sbjct: 164 NTVIKQVSCGAVHVMALSEDGLLQAWGYNEYGQLGRGRTSQGLQGARVLNAYARFLDDAP 223
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG----VEGKLDLVVHDPHPMSWSED 136
+ +V++S G +H+AA +++G +Y WG + GQ+G G +L+ +
Sbjct: 224 EQVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRRVVAL----- 278
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I V DV+CG H+ A+ + +L+ G QL +G
Sbjct: 279 ---DGIVVGDVSCGGVHSCAVTEGGALYAWGGGHVGQLGVG 316
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG-------TDAN 71
+P R+ +VV D++CG H A+T+ G +++WG G GQLG G ++
Sbjct: 271 IPRRVVALDGIVVGDVSCGGVHSCAVTEGGALYAWGGGHVGQLGVGPQGGFFSCSLNGSD 330
Query: 72 MEPREIRALS-GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
M R I L GV + G H+ +DG +Y WG+N+ GQ E P P
Sbjct: 331 MLLRNIPVLVIPSGVRLATCGHSHTLVSMKDGRIYGWGYNSYGQATNE--KSTYAWFPSP 388
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ W +V +A G H+ L D SL
Sbjct: 389 VDWCVG------EVRRLAAGGGHSAVLTDACSL 415
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 104 LYAWGWNNGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y WG+N+ GQ +GK L + P + + ++++ D+ACG HT A+ D S
Sbjct: 21 IYIWGYNHSGQTARKGKECHLRIPKSLPPKLFKLGNGKSLRWTDIACGREHTAAVASDGS 80
Query: 163 LWGCGWNEYNQLSMG 177
L+ G NE+ QL G
Sbjct: 81 LFTWGANEFGQLGDG 95
>gi|218193272|gb|EEC75699.1| hypothetical protein OsI_12517 [Oryza sativa Indica Group]
Length = 555
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 20/173 (11%)
Query: 14 SQVFHMPSR-MDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDA 70
++V + +R +D +LV + ++CG H A+++ G V++WG GS GQLG+ S D
Sbjct: 285 ARVLNAYARFLDEAPELVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDK 344
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHD 127
+ PR + AL + +S GG HS A T+DG LYAWG + GQ+G+ G ++
Sbjct: 345 ELIPRRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGFFSCALN- 403
Query: 128 PHPMSWSEDFDSQNIKVVD-------VACGSRHTLALCDDNSLWGCGWNEYNQ 173
D +NI V+ V CG HTL D+ ++G G+N Y Q
Sbjct: 404 ------GSDMLLRNIPVLIIPSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYGQ 450
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 39/200 (19%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQISAG 91
D+ACG H A+ +G +++WG GQLG GT+ + EP++++AL V +S G
Sbjct: 140 DVACGRGHTAAVASDGSLYTWGANDFGQLG---DGTEESAKEPQKVKALETEFVKSVSCG 196
Query: 92 GWHSAA----RTQDGF-----LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+AA R +G L+ WG N G D + W + N
Sbjct: 197 AHCTAAVAEPRENNGTISRSRLWVWGQNQG-------------SDYPRLFWGAL--APNT 241
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC------GVSQVSVMTRL--SVPEH 194
+ V+CG+ H +AL +D L G+NEY QL GC G ++ R PE
Sbjct: 242 VIRQVSCGAVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPEL 301
Query: 195 VKNCPIVKLFAEHWNSARLS 214
VK IV++ +++A +S
Sbjct: 302 VK---IVRVSCGEYHTAAIS 318
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 19/161 (11%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDA----NMEPREI-RAL 80
+ V+ ++CG H +AL+++G++ +WG GQLG S G N R + A
Sbjct: 240 NTVIRQVSCGAVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAP 299
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG----VEGKLDLVVHDPHPMSWSED 136
+ +V++S G +H+AA +++G +Y WG + GQ+G G +L+ P +
Sbjct: 300 ELVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELI---PRRVV---A 353
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D I+ DV+CG H+ A+ +D +L+ G QL +G
Sbjct: 354 LDRTVIR--DVSCGGVHSCAVTEDGALYAWGGGHVGQLGLG 392
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 16/153 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSG------TDAN 71
+P R+ V+ D++CG H A+T++G +++WG G GQLG P SG ++
Sbjct: 347 IPRRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGFFSCALNGSD 406
Query: 72 MEPREIRAL-SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
M R I L GV ++ G H+ +D +Y WG+N+ GQ E P P
Sbjct: 407 MLLRNIPVLIIPSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYGQAANEK--STYAWFPSP 464
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ W +V +A G H+ L D SL
Sbjct: 465 VDWCVG------EVRRLAAGGGHSAVLTDACSL 491
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GG A +Y WG+N+ GQ +GK L + P + D +N++ +DVAC
Sbjct: 84 GGLRVAGVPTKSAIYLWGYNHSGQTARKGKECHLRIPKSLPPKLFKWQDGKNLRWIDVAC 143
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G HT A+ D SL+ G N++ QL G
Sbjct: 144 GRGHTAAVASDGSLYTWGANDFGQLGDG 171
>gi|324515840|gb|ADY46333.1| RCC1 domain-containing protein 1 [Ascaris suum]
Length = 325
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 14/143 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVVQIS 89
+ +A G H L L G+V+S+G GSRG+LG+ GT ++ P+ I LS + +++I+
Sbjct: 195 IISMASGKCHVLLLNSSGLVYSFGTGSRGELGH---GTLESEQMPKLIDVLSMIPIIEIA 251
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G WHS A T+DG +Y WGWN+ GQ+ D +V+ P P++ ++ ++ V+
Sbjct: 252 CGAWHSVALTKDGDVYVWGWNSCGQLSAN---DSIVNFPLPLNIDDE-------IIAVSA 301
Query: 150 GSRHTLALCDDNSLWGCGWNEYN 172
TL + DN + G +N
Sbjct: 302 YRNATLLMKADNKIVMLGTIGFN 324
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
++ +++G H G +Y++G + G++G G L+ M D S I +
Sbjct: 195 IISMASGKCHVLLLNSSGLVYSFGTGSRGELG-HGTLE-----SEQMPKLIDVLSM-IPI 247
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
+++ACG+ H++AL D ++ GWN QLS
Sbjct: 248 IEIACGAWHSVALTKDGDVYVWGWNSCGQLS 278
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQL 61
MP +D + + +IACG H +ALT++G V+ WG S GQL
Sbjct: 234 QMPKLIDVLSMIPIIEIACGAWHSVALTKDGDVYVWGWNSCGQL 277
>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
Length = 675
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 87/163 (53%), Gaps = 18/163 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG + S T P+ + LSG+ +V
Sbjct: 49 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPT-----PQLVEHLSGVPLV 103
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QISAG HS A + G +Y+WG N+ GQ+G+ G D + P S E DSQ KV
Sbjct: 104 QISAGKAHSMALSMSGNIYSWGRNDLGQLGL-GHTD---GEEFP-SLVEALDSQ--KVEF 156
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ACG HT L +D ++ G ++ QL G +Q + RL
Sbjct: 157 LACGGSHTALLTEDGQVFTFGAGKHGQL--GHNSTQNELRPRL 197
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG TD P + A
Sbjct: 91 PQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGL--GHTDGEEFPSLVEA 148
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG H+A T+DG ++ +G GQ+G ++ P +E
Sbjct: 149 LDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNS----TQNELRPRLVTE---L 201
Query: 140 QNIKVVDVACGSRHTLALCDD 160
I+V VACG RHTLA D
Sbjct: 202 TGIRVTQVACGRRHTLAYVSD 222
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 14/161 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
PS ++ V +ACG H LT++G VF++G G GQLG+ S T + PR +
Sbjct: 142 FPSLVEALDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNS--TQNELRPRLVT 199
Query: 79 ALSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED- 136
L+G+ V Q++ G H+ A D G ++++G GQ+G G + ++ P + +ED
Sbjct: 200 ELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEDL 259
Query: 137 -FDSQN--IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
F+S+ +++ +A G++ L LW N Y L
Sbjct: 260 KFESRTSEKELIMIAGGNQSIL-------LWMGKKNPYVNL 293
>gi|115609688|ref|XP_784766.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Strongylocentrotus purpuratus]
Length = 1035
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS--------SGTDANMEPREIRALSG 82
+ + CG H LAL+ +G V+SWG GQLG S + PR I LS
Sbjct: 77 IVSVCCGRHHFLALSADGRVYSWGRNDVGQLGIRKKKQRYDNQSQITQDFTPRLIEELSN 136
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
V+QI+ G HS A T DG L++WG N GQ+GVE K H E I
Sbjct: 137 YDVIQIACGDVHSIALTLDGRLFSWGCNRHGQLGVETKWAAKEAKDHAEKPIEIEGLWGI 196
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
V +A G H++AL S++ G N + QL +
Sbjct: 197 PVQHIAAGGAHSVALSTTGSIFVWGSNTHGQLGL 230
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS-----GTDANMEP 74
P ++ + V IACG H +ALT +G +FSWG GQLG + D +P
Sbjct: 128 PRLIEELSNYDVIQIACGDVHSIALTLDGRLFSWGCNRHGQLGVETKWAAKEAKDHAEKP 187
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
EI L G+ V I+AGG HS A + G ++ WG N GQ+G++ KLD V S S
Sbjct: 188 IEIEGLWGIPVQHIAAGGAHSVALSTTGSIFVWGSNTHGQLGLQ-KLDDVKLPVKLCSLS 246
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWNE 170
+ N+ V V+CG HT L + L +G G +
Sbjct: 247 QG----NVNV--VSCGMHHTSFLKQNGQLLVYGMGLDR 278
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 85/152 (55%), Gaps = 13/152 (8%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P R++ +L + DIA G H ALT+EG V++WG G G+LG+ ++M
Sbjct: 237 TQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGF-GDDKSSHMV 295
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHD 127
P +++ L+G +VQ+S GG HS T DG ++++G + G++G K +++ ++
Sbjct: 296 PLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLGDGRKVTTGHPMEVPINL 355
Query: 128 PHPM--SWSEDFDSQNIKVVDVACGSRHTLAL 157
P P + SE N VACG RHTLA+
Sbjct: 356 PPPKTSTSSEGLWQANY----VACGGRHTLAI 383
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 10/152 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V+ IA G H LAL+ + I+++WGN GQLG T +P + LS L +V I+A
Sbjct: 202 VSMIAVGAFHNLALSVDRILWAWGNNEYGQLGI--GDTQPRSQPIRVEGLSNLSLVDIAA 259
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GGWHSAA T++G +YAWG G++G + K +V + ED +V V+C
Sbjct: 260 GGWHSAALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPLQVQLLAGED-------IVQVSC 312
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
G H++ L D ++ G ++ +L G V+
Sbjct: 313 GGTHSVVLTSDGRIFSYGRGDHGRLGDGRKVT 344
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 94/232 (40%), Gaps = 52/232 (22%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V+ + G + LA+ +G +F+WG RG LG+P T P + AL G+ +VQ +
Sbjct: 42 AVSAVVAGSRNSLAICDDGSLFTWGWNQRGTLGHPPE-TKTESSPAHVDALVGVKIVQAA 100
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD--------------------------- 122
GGWH A G YAWG N GQ G E +
Sbjct: 101 IGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVA 160
Query: 123 -------LVVHDPHPMSWSEDFDSQNIKVVD-------------VACGSRHTLALCDDNS 162
++ + H +W + + +IK + +A G+ H LAL D
Sbjct: 161 AGGTHSVVLTQEGHVWTWGQPWPPGDIKNISTPVRVQGLEQVSMIAVGAFHNLALSVDRI 220
Query: 163 LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
LW G NEY QL G+ ++ E + N +V + A W+SA L+
Sbjct: 221 LWAWGNNEYGQL----GIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALT 268
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 55/127 (43%), Gaps = 14/127 (11%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V +WG+G GQLG G D R I AL V + AG +S A DG L+ WGW
Sbjct: 10 VLAWGSGEDGQLGM--GGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTWGW 67
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ---NIKVVDVACGSRHTLALCDDNSLWGC 166
N G +G H P + S +K+V A G H LA+ D +
Sbjct: 68 NQRGTLG---------HPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDKGRAYAW 118
Query: 167 GWNEYNQ 173
G NEY Q
Sbjct: 119 GGNEYGQ 125
>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
[Ailuropoda melanoleuca]
Length = 1035
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 87/163 (53%), Gaps = 18/163 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ IACG H LAL++ G +F+WG GQLG + S T P+ + LSG+ +V
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPT-----PQAVEHLSGVPLV 205
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QISAG HS A + G +Y+WG N+ GQ+G+ G D + P S E D+Q ++
Sbjct: 206 QISAGKAHSMALSMSGNVYSWGRNDLGQLGL-GHTD---GEDFP-SLIETLDNQQVEF-- 258
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ACG HT L D ++ G +Y QL G +Q + RL
Sbjct: 259 LACGGSHTALLTTDGLVFTFGAGKYGQL--GHNSTQNELRPRL 299
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G V+SWG GQLG TD P I
Sbjct: 193 PQAVEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGL--GHTDGEDFPSLIET 250
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG H+A T DG ++ +G GQ+G ++ P +E +
Sbjct: 251 LDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNS----TQNELRPRLVTELAGN 306
Query: 140 QNIKVVDVACGSRHTLALCDD 160
+V +ACG RHTLA D
Sbjct: 307 ---RVTQIACGRRHTLAYVSD 324
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 14/161 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
PS ++ + V +ACG H LT +G+VF++G G GQLG+ S T + PR +
Sbjct: 244 FPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNS--TQNELRPRLVT 301
Query: 79 ALSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED- 136
L+G V QI+ G H+ A D G ++++G GQ+G G + ++ P + +E+
Sbjct: 302 ELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEEL 361
Query: 137 -FDSQ--NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
F+S+ + ++V +A G++ L LW N Y L
Sbjct: 362 KFESRTSDKELVMIAGGNQSVL-------LWMEKKNPYVNL 395
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q ++ +ACG H+LAL L+ G N + QL G G S+ T +V EH+ P
Sbjct: 147 QEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQL--GVGRLFASIPTPQAV-EHLSGVP 203
Query: 200 IVKLFAEHWNSARLSV 215
+V++ A +S LS+
Sbjct: 204 LVQISAGKAHSMALSM 219
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG LALT++G VFSWG+G G+LG G++ + P EI LSG+GV+QI
Sbjct: 3238 VIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG--RGGSEGSATPHEIERLSGIGVIQI 3295
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D V P P++ + +V+ VA
Sbjct: 3296 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIA-----GLRGRRVIHVA 3348
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H LA+ D ++ G N++ Q G
Sbjct: 3349 VGALHCLAVTDAGQVYAWGDNDHGQQGSG 3377
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 27/170 (15%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P ++ VV +A G H LALT +G VFSWG G G+LG+ + T +PR
Sbjct: 3120 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLD--KPRL 3177
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-------VEGKLDLVVHDPH 129
+ AL + I+ G HSAA + G LY WG G++G ++ KL +H
Sbjct: 3178 VEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALH--- 3234
Query: 130 PMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+V+ VACGSR TLAL +D +++ G ++ +L G
Sbjct: 3235 -----------GRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3273
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L V + CG +ALT+ G V++WG G +LG+ S D P+++
Sbjct: 4434 LPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS--VDHVRRPKKVA 4491
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G +Y WG N+ GQ+G +G + + P ++
Sbjct: 4492 ALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG-DGTVT-AIQRPRLVA-----A 4544
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 4545 LQGKHIVKVTCGSAHTLAL 4563
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H A++ +G +++WG G G+LG+ + T ++P+ + AL G V+Q++
Sbjct: 3186 IRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNAT--QLKPKLVTALHGRRVIQVAC 3243
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T+DG +++WG + G++G G PH E I V+ +
Sbjct: 3244 GSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSAT--PH-----EIERLSGIGVIQIE 3296
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG++ +LAL +W G +Y +L G
Sbjct: 3297 CGAQFSLALTRAGEVWTWGKGDYYRLGHG 3325
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ + + V +A G HCLALT +G V++WG G G+LG+ G + + P+
Sbjct: 4274 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH---GNRMSYDRPK 4330
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L+G+ V I+ G HSAA T G + WG G++G D + P +
Sbjct: 4331 LLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALL 4388
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + +D+ACGS TL + DD+++W G +Y +L G
Sbjct: 4389 GY-----RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4427
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 84/213 (39%), Gaps = 59/213 (27%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS---------- 66
+ P ++H + V DIACG H A+T G V +WG G G+LG+ S
Sbjct: 4326 YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 4385
Query: 67 ------------------------------------------GTDANMEPREIRALSGLG 84
G+D P +I +L+GLG
Sbjct: 4386 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 4445
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+++ G S A T+ G +Y WG + ++G G +D H P + Q K+
Sbjct: 4446 VIKVECGSQFSVALTKSGAVYTWGKGDFHRLG-HGSVD---HVRRPKKVAA---LQGKKI 4498
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +A GS H +A D ++ G N+ QL G
Sbjct: 4499 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDG 4531
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V I CG LALT+ G V++WG G +LG+ G +P+ I
Sbjct: 3281 PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH--GGDQHVRKPQPIAG 3338
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWS 134
L G V+ ++ G H A T G +YAWG N+ GQ G V K LV+
Sbjct: 3339 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI--------- 3389
Query: 135 EDFDSQNIKVVDVACGSRHTLA 156
D+ + V VACGS H++A
Sbjct: 3390 -GLDA--VFVNRVACGSSHSMA 3408
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGV--VQISA 90
IA G ++Q+G V++ G G+ G+LG G N+ P ++ L V V + +
Sbjct: 3083 IAGGSKSLFVVSQDGKVYACGEGTNGRLGL---GVTHNVPLPHQLPVLHQYVVKKVAVHS 3139
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A T DG +++WG G++G + L P E ++ I+ D+ACG
Sbjct: 3140 GGKHALALTLDGKVFSWGEGEDGKLGHGNRSTL--DKPR---LVEALRAKKIR--DIACG 3192
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S H+ A+ L+ G EY +L G +Q+
Sbjct: 3193 SSHSAAISSQGELYTWGLGEYGRLGHGDNATQLK 3226
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P++++ + V + CG + A+T G +++WG G+ G+LG+ +S D P +
Sbjct: 658 ELPTKIESLVR-RVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNS--DDQCMPAMV 714
Query: 78 RALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVG 116
AL V+ ++ +G H+ T+ G +YAWG + G++G
Sbjct: 715 MALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLG 755
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME----PREIRALSGLGVV 86
V + G LALT EG ++SWG S LG+ + N++ PR I +L +V
Sbjct: 774 VQRVFAGSQFSLALTCEGQLYSWGKAS--CLGH--QLVERNVQGCSVPRLITSLQHKRIV 829
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQV 115
++ G H A + +G ++ WG N+ Q+
Sbjct: 830 HVAVGVAHCLALSSNGEIFGWGRNDNQQI 858
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Query: 36 CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHS 95
C H LA+ +SWG G +LG+ A P +I +L V + G +S
Sbjct: 624 CEGRHFLAVDSNHNAYSWGVGDSRRLGH--GDCHARELPTKIESLVR-RVQSVYCGCSYS 680
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T G LY WG G++G G D M+ + +V+DVA GS H
Sbjct: 681 AAITLRGNLYTWGRGTYGRLG-HGNSDDQCMPAMVMALKDH------QVLDVALGSGDAH 733
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TL L ++ G +Y +L G
Sbjct: 734 TLCLTRGGLVYAWGDGDYGKLGNG 757
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 11/169 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ RGQLG P E ALS L +Q++ G A T DG L+A G+
Sbjct: 4201 IYGWGHNHRGQLGGLEGSRIKTPTPCE--ALSLLRPIQLAGGEQSLFAVTPDGKLFATGY 4258
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
+GG++GV G + + +K V V G +H LAL D ++ G
Sbjct: 4259 GSGGRLGVGGSDSWAIP-----TLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEG 4313
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEH 218
E +L G +S R + EH+ + + +SA ++ H
Sbjct: 4314 EDGKLGHGNRMS----YDRPKLLEHLNGMSVADIACGSAHSAAITASGH 4358
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V WG + QLG G+ + P + +S L + I+ G +QDG +YA G
Sbjct: 3047 VMVWGLNDKEQLGG-LKGSKVKV-PTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGE 3104
Query: 110 NNGGQVGVEGKLDLVVHD---PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
G++G+ V H+ PH + + +K V V G +H LAL D ++
Sbjct: 3105 GTNGRLGLG-----VTHNVPLPHQLPVLHQY---VVKKVAVHSGGKHALALTLDGKVFSW 3156
Query: 167 GWNEYNQLSMG 177
G E +L G
Sbjct: 3157 GEGEDGKLGHG 3167
>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1
[Bifidobacterium asteroides PRL2011]
gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1
[Bifidobacterium asteroides PRL2011]
Length = 1160
Score = 81.6 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-----MEPREIRALSG 82
D ++ G + LA+ +G V++WGN GQLG SSG + ++P + R SG
Sbjct: 722 DFTYVQVSAGDEQSLAVGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPR--SG 779
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
L VQ+SAG +HS A G ++AWG+N G++G ++ + P D+ +
Sbjct: 780 LTAVQVSAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAI----PTLAQYPRDAGTV 835
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V+ G HT A+ + W GWN + QL G
Sbjct: 836 TAIQVSGGFHHTAAIDTKGNTWSWGWNWFGQLGNG 870
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV---QISA 90
++ G DH L + +G ++WG G+LG SS DAN P ++ G V Q+SA
Sbjct: 895 VSAGADHSLIIDTKGNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSA 954
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGV----EGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
GG+HS A ++G +AWG N+ G++G+ + ++ +V P ++ + V
Sbjct: 955 GGYHSLAIDKNGNAWAWGGNDSGELGIGTTSKSEIPALVQYPK--------NAGAVTTVQ 1006
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
V+ G H+L + + W G+N++ QL G +S S+ T
Sbjct: 1007 VSAGGYHSLGIDKEGKTWAWGYNQFGQLGNGT-ISNSSIPT 1046
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA----NMEPREIRALSGLG 84
L ++ G+ H LAL G +++WG G+LG ++ A PR+ ++
Sbjct: 780 LTAVQVSAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTA-- 837
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
+Q+S G H+AA G ++WGWN GQ+G +D + P P+ + D+ ++
Sbjct: 838 -IQVSGGFHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAI--PVPVQYPR--DAGTVRA 892
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS-VMTRLSVPEHVKNCPIVKL 203
+ V+ G+ H+L + + W GWN+ +L G + + V + PE+ +++
Sbjct: 893 IQVSAGADHSLIIDTKGNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQV 952
Query: 204 FAEHWNS 210
A ++S
Sbjct: 953 SAGGYHS 959
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 20/150 (13%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV----VQISAGGWHSAA 97
LA+ +G ++WG + GQLG + T N +P ++ +G VQ+SAG S A
Sbjct: 680 LAVGSDGNAYAWGRNNYGQLG-DGTLTQRN-KPVIVKKPAGASADFTYVQVSAGDEQSLA 737
Query: 98 RTQDGFLYAWGWNNGGQVGVEGK-----LDLVVHDPH-PMSWSEDFDSQNIKVVDVACGS 151
DG++YAWG N GQ+G + L V DP+ P S + V V+ G
Sbjct: 738 VGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRS--------GLTAVQVSAGY 789
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
H+LAL ++W G+N++ +L G ++
Sbjct: 790 YHSLALDARGNIWAWGFNQFGELGNGNNIN 819
Score = 38.1 bits (87), Expect = 3.5, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Query: 101 DGFLYAWGWNNGGQVGVEGKL---DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
DG YAWG NN GQ+G +G L + V P S DF V V+ G +LA+
Sbjct: 685 DGNAYAWGRNNYGQLG-DGTLTQRNKPVIVKKPAGASADF-----TYVQVSAGDEQSLAV 738
Query: 158 CDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
D ++ G NE QL G +V R+ P
Sbjct: 739 GSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDP 773
>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
CCMP526]
Length = 1021
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 31/208 (14%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGG 92
D+A G ++ +T++G +++WG+GS +LG+ S PR++ AL + +V+++ G
Sbjct: 691 DLAAGLNYSAGVTEDGKLYTWGDGSNHKLGHGDS--KPVYRPRQVEALQDVKIVKVACGD 748
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDL-VVHDPHPMSWSEDFDSQNIKVVDVACGS 151
+H+AA +DG L+ WGW G+ G P P D +V VACG
Sbjct: 749 FHTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVD-YGCRVGSVACGE 807
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
+HTL L DD + G EY +L G VPE V+LF E N
Sbjct: 808 KHTLILTDDGEVLTAGNGEYGRLGNGGSSDH-------GVPEP------VELFDEKTN-- 852
Query: 212 RLSVPEHAKDSSIVKLFAGHWNSGILVQ 239
IV++ AGH + +L Q
Sbjct: 853 ------------IVEVAAGHAFNLVLTQ 868
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 28/138 (20%)
Query: 50 VFSWGNGSRGQLGYPS------SGTDANMEPREIRALSGL-----------GVVQISAGG 92
VF+WG G+ GQLG+ +G + PRE+R + G V ++AG
Sbjct: 637 VFAWGQGTEGQLGHSPIQKSALTGAYVELSPRELRLDTEQDQQKIEKHNPWGFVDLAAGL 696
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH-DPHPMSWSEDFDS-QNIKVVDVACG 150
+SA T+DG LY WG + ++G H D P+ ++ Q++K+V VACG
Sbjct: 697 NYSAGVTEDGKLYTWGDGSNHKLG---------HGDSKPVYRPRQVEALQDVKIVKVACG 747
Query: 151 SRHTLALCDDNSLWGCGW 168
HT A+ +D LW GW
Sbjct: 748 DFHTAAIDEDGRLWTWGW 765
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 16/170 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG H L LT +G V + GNG G+LG S EP E+ +V+++A
Sbjct: 800 VGSVACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFD-EKTNIVEVAA 858
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS-WSEDFDSQNIKVVDVAC 149
G + TQDG ++ WG N GQ+G+ G + + V+ + E +S+ KVV VA
Sbjct: 859 GHAFNLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESK--KVVHVAA 916
Query: 150 GSRHTLALCDDNSL--WGCGWNEYNQL----------SMGCGVSQVSVMT 187
G H+ A+ ++ L WG + Q+ +GCG S +V+T
Sbjct: 917 GHSHSAAVTEEGELYMWGMKIHLEPQVFRVGEGDKVWQVGCGGSHTAVVT 966
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWG-NGSRGQLGYPSSGTDANM 72
S+ + P +++ D+ + +ACG H A+ ++G +++WG GS D
Sbjct: 724 SKPVYRPRQVEALQDVKIVKVACGDFHTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAE 783
Query: 73 EPRE--IRALSGLG--VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
+PR +R+L G V ++ G H+ T DG + G G++G G D V +P
Sbjct: 784 QPRPKVVRSLVDYGCRVGSVACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEP 843
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR 188
E FD + +V+VA G L L D ++ G NE QL +G G+S + V +
Sbjct: 844 -----VELFD-EKTNIVEVAAGHAFNLVLTQDGKIFTWGRNEQGQLGLGGGIS-MDVYSM 896
Query: 189 LSVP---EHVKNCPIVKLFAEHWNSARLS 214
+VP E +++ +V + A H +SA ++
Sbjct: 897 EAVPLLVEALESKKVVHVAAGHSHSAAVT 925
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 28/137 (20%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-------PREIRALSGL 83
+ ++A G L LTQ+G +F+WG R + G G +M+ P + AL
Sbjct: 853 IVEVAAGHAFNLVLTQDGKIFTWG---RNEQGQLGLGGGISMDVYSMEAVPLLVEALESK 909
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
VV ++AG HSAA T++G LY WG K+ L +P E K
Sbjct: 910 KVVHVAAGHSHSAAVTEEGELYMWGM----------KIHL---EPQVFRVGE-----GDK 951
Query: 144 VVDVACGSRHTLALCDD 160
V V CG HT + +D
Sbjct: 952 VWQVGCGGSHTAVVTED 968
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 20/130 (15%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +A G H A+T+EG ++ WG ++EP+ R G V Q+
Sbjct: 911 VVHVAAGHSHSAAVTEEGELYMWG-------------MKIHLEPQVFRVGEGDKVWQVGC 957
Query: 91 GGWHSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GG H+A T+D L+ +G + +G + + PHP ++ + VV VAC
Sbjct: 958 GGSHTAVVTEDAHQLFTFGKGSSLCLGHGTR----SYTPHPKLVADGLAGRG--VVKVAC 1011
Query: 150 GSRHTLALCD 159
G RH + D
Sbjct: 1012 GHRHMAVITD 1021
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 81.6 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 16/165 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG +H + ++ G +FS+G GQLG+ + + P+EI ++ + + QI+
Sbjct: 92 VRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDK--ENELLPKEIESIPQMEIKQIAC 149
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HS ++DG +Y WG NN GQ+G+ +++ + P + + ++ VV V+CG
Sbjct: 150 GTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSL--PKKLKFKKE-------VVSVSCG 200
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
HT + D L+ G NE +L G SQ+S T VP+ V
Sbjct: 201 YYHTALVTRDGFLYTFGENELGKL--GLSSSQLSNTT---VPQSV 240
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 10/167 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA-NMEPREI 77
+P ++ + + IACG H + L+++G V+ WGN + GQLG G + N P+++
Sbjct: 132 LPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGL---GEEVENSLPKKL 188
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ VV +S G +H+A T+DGFLY +G N G++G+ P ++ D
Sbjct: 189 KFKK--EVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADN 246
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
D + + V+CG+RHT+A+ + G QL G + +V+
Sbjct: 247 D----EYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVN 289
Score = 76.6 bits (187), Expect = 8e-12, Method: Composition-based stats.
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 11/143 (7%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q MP+ D ++ ++CG H +A+T++G ++WG+GS+GQLG+ + + N EP
Sbjct: 238 QSVAMPADNDEYIS-----VSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVN-EP 291
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
++I+ LSG + +S G H+A T+ G ++ +G G++G DP +S
Sbjct: 292 KQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRF 351
Query: 135 EDFDSQNIKVVDVACGSRHTLAL 157
F+ VV V+CG HTL L
Sbjct: 352 NYFN-----VVYVSCGGCHTLVL 369
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RALSGLGVVQIS 89
V ++CG+ H +T++G ++++G G+LG SS P+ + + +S
Sbjct: 194 VVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVS 253
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H+ A T+ G YAWG + GQ+G KL L V++P + + Q K + V+C
Sbjct: 254 CGARHTVAITKQGHCYAWGDGSQGQLGHGTKL-LEVNEPKQI---KKLSGQ--KCISVSC 307
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G HT + + ++ G + +L G
Sbjct: 308 GESHTAVVTESGKVFTFGDGRHGKLGQG 335
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
GVV+++ G HSA T+ G LY +G N+ GQ+G+ L + S+ + + K
Sbjct: 39 GVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSL-----NKPSFVKPLKPE--K 91
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V VACG HT+ + L+ G NE QL
Sbjct: 92 VRKVACGRNHTIVYSESGKLFSFGCNEDGQL 122
>gi|349605413|gb|AEQ00660.1| putative E3 ubiquitin-protein ligase HERC4-like protein, partial
[Equus caballus]
Length = 911
Score = 81.6 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 12/143 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGVVQISAG 91
+ACG+ H LAL++ VF WG GQLG G D + P+ I++L G+ +Q++AG
Sbjct: 3 VACGYYHSLALSKASEVFCWGQNKYGQLGL---GIDYKKQASPQLIKSLLGIPFMQVAAG 59
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
G HS T G ++ WG N GQ+G+ + +D + + + +Q K+V + CG
Sbjct: 60 GAHSFVLTLSGAIFGWGRNKFGQLGLNDE-----NDRYFPNLLKSLRTQ--KIVYICCGE 112
Query: 152 RHTLALCDDNSLWGCGWNEYNQL 174
HT AL + ++ G Y QL
Sbjct: 113 DHTAALTKEGGVFTFGAGGYGQL 135
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 92 YFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 149
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 150 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 189
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 14/171 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREI 77
P + L + +A G H LT G +F WG GQLG D N P +
Sbjct: 42 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL----NDENDRYFPNLL 97
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
++L +V I G H+AA T++G ++ +G GQ+G H ++ + F
Sbjct: 98 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-------SHEINPRKVF 150
Query: 138 DSQNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVSVMT 187
+ V +ACG +HT A + ++ G QL G ++ S T
Sbjct: 151 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 201
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 18/97 (18%)
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-- 143
VQ++ G +HS A ++ ++ WG N GQ+G+ + + + Q IK
Sbjct: 1 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------------IDYKKQASPQLIKSL 48
Query: 144 ----VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ VA G H+ L +++G G N++ QL +
Sbjct: 49 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 85
>gi|428184753|gb|EKX53607.1| hypothetical protein GUITHDRAFT_160884 [Guillardia theta CCMP2712]
Length = 308
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 3/172 (1%)
Query: 7 SGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS 66
SG L + V + + V D++CG + +T+ G V+S G+ G+LG P++
Sbjct: 113 SGALGLGKDVVKAKQPTEIPIPEPVIDVSCGKKFTVFVTESGKVYSMGDNKNGELGNPNA 172
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
G+ ++ EP + L G+ +V+I+AG +H A + G +Y+WGW G G G L
Sbjct: 173 GS-SSYEPTIVHGLDGIKIVKIAAGQYHVLALSDIGEVYSWGWGGSGTPGA-GVGALGHG 230
Query: 127 DPHPMSWSEDFDSQN-IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D + + + N K+ +++CG++H++AL D +++ G E +L G
Sbjct: 231 DKASLPVPKRIERLNGEKITNISCGAKHSVALSQDGTMFTWGHGEQGRLGHG 282
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 25 HFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQ----LGYPSSGTDANME-PREIR 78
H LD + + IA G H LAL+ G V+SWG G G +G G A++ P+ I
Sbjct: 183 HGLDGIKIVKIAAGQYHVLALSDIGEVYSWGWGGSGTPGAGVGALGHGDKASLPVPKRIE 242
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
L+G + IS G HS A +QDG ++ WG G++G D + P P+S S
Sbjct: 243 RLNGEKITNISCGAKHSVALSQDGTMFTWGHGEQGRLGHGNNTDFL--QPEPISES 296
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 18/118 (15%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ---- 140
V+ +S G + T+ G +Y+ G N G++G +P + S ++
Sbjct: 137 VIDVSCGKKFTVFVTESGKVYSMGDNKNGELG------------NPNAGSSSYEPTIVHG 184
Query: 141 --NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
IK+V +A G H LAL D ++ GW G G L VP+ ++
Sbjct: 185 LDGIKIVKIAAGQYHVLALSDIGEVYSWGWGGSGTPGAGVGALGHGDKASLPVPKRIE 242
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 82/158 (51%), Gaps = 21/158 (13%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ G H LAL+ EG V+SWG G G+LG+ + T + PR I +L G V+ I+ GG
Sbjct: 3273 VNSGGKHALALSVEGEVYSWGEGEDGKLGH-GNRTQCD-RPRVIESLRGKEVIDIACGGA 3330
Query: 94 HSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
HSA T G LY WG G++G E +L + D + +V+DVACG
Sbjct: 3331 HSACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADAL----------KGYRVIDVACG 3380
Query: 151 S--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVSQ 182
S TL + DD+++W G +Y +L S GC V Q
Sbjct: 3381 SGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQ 3418
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 19/193 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D + V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 3416 VPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSD--DHVRRPRKVA 3473
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G +Y WG N+ GQ+G +G + + P ++ +D
Sbjct: 3474 ALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLG-DGTTN-AIQRPRIVTALQD-- 3529
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWN-----EYNQLSMGCGVSQVSVMTRLSVPE 193
K+ +VACGS HT+A L EYN L V+ + RL +
Sbjct: 3530 ---KKITNVACGSAHTVAWSTSKPLHAGRLPQTVPMEYNLLRE---VNIPVIRNRLVLLH 3583
Query: 194 HVKN--CPIVKLF 204
H CP + +F
Sbjct: 3584 HFSELFCPSIPMF 3596
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ S T + P+ ++A
Sbjct: 2336 PRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGDSTT--QLRPKLVKA 2393
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + T +G +Y+WG + G++G G V PH + E
Sbjct: 2394 LVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGCSV--PHNV---ERL 2448
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ Q V+ + CG++ +LAL +W G +Y +L G
Sbjct: 2449 NGQG--VIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHG 2486
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 83/178 (46%), Gaps = 23/178 (12%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
SQ +P +++ VV +A G H +ALT +G VFSWG G G+LG+ S N
Sbjct: 2276 SQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHLSR---MN 2332
Query: 72 ME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
E PR + AL + I+ G HSAA T G LY WG G++G H
Sbjct: 2333 CEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLG---------HGDST 2383
Query: 131 MSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGCGV 180
+ +V+ VACGSR TL L D+ ++ G ++ +L S GC V
Sbjct: 2384 TQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGCSV 2441
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 14/165 (8%)
Query: 23 MDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRAL 80
++ FL L V A G +T EG V++ G G+ G+LG G+ N++ P+++ L
Sbjct: 2232 LNEFLSSLKVVCCAGGSKSLFVVTAEGKVYACGEGTNGRLGL---GSSQNVDIPKQVNGL 2288
Query: 81 SGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
S V V + +GG H+ A T DG +++WG + G++G +++ P + E
Sbjct: 2289 SQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMN--CEKPRLL---EALK 2343
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 2344 TKRIR--DIACGSSHSAAVTSSGELYTWGLGEYGRLGHGDSTTQL 2386
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + + V +ACG L LT EG+V+SWG+G G+LG G++ P +
Sbjct: 2388 PKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLG--RGGSEGCSVPHNV 2445
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV+QI G S A T+ G ++ WG + ++G D V P +E
Sbjct: 2446 ERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLG--HGTDSHVRKPQ---VAEGL 2500
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
+ K++ VA G+ H LA+ D ++ G N++ Q
Sbjct: 2501 KGK--KIIHVAVGALHCLAVTDTGQVFAWGDNDHGQ 2534
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQIS 89
V I CG LALT+ G V++WG G +LG+ GTD+++ +P+ L G ++ ++
Sbjct: 2453 VIQIECGAQFSLALTKAGQVWTWGKGDYFRLGH---GTDSHVRKPQVAEGLKGKKIIHVA 2509
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H A T G ++AWG N+ GQ G +G V P + E +++ VAC
Sbjct: 2510 VGALHCLAVTDTGQVFAWGDNDHGQQG-DGST-TVNKKPALVQGLE-----GVRITRVAC 2562
Query: 150 GSRHTLA 156
GS H+ A
Sbjct: 2563 GSSHSTA 2569
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V DIACG H +T G +++WG G G+LG+ S + + P+ AL G V+ ++
Sbjct: 3322 VIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDS--EDQLRPKMADALKGYRVIDVAC 3379
Query: 91 GGWHSAAR--TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDV 147
G S + D +++WG + G++G G V + D+ +I V V
Sbjct: 3380 GSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKV--------PQKVDALSSIGVCKV 3431
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CGS+ ++AL ++ G +Y++L G
Sbjct: 3432 ECGSQFSIALTKSGCVYTWGKGDYHRLGHG 3461
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ ++ L I G A+T +G +++ G G+ G+LG GTD+ P +
Sbjct: 3204 VPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGYGASGRLGI--GGTDSVSTPTLLE 3261
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + V +++GG H+ A + +G +Y+WG G++G + P +
Sbjct: 3262 SIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQ--CDRPRVIE---- 3315
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+ +V+D+ACG H+ + L+ G Y +L G Q+
Sbjct: 3316 -SLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQL 3361
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P I +L+ L +QI G A T DG LYA
Sbjct: 3181 GTIYGWGHNHRGQLGG-IEGAKVKV-PTAIESLTSLRPIQIVGGEQTLFAVTADGKLYAT 3238
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ G++G+ G V P + E +IK V V G +H LAL + ++ G
Sbjct: 3239 GYGASGRLGIGGTDS--VSTP---TLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWG 3293
Query: 168 WNEYNQLSMG 177
E +L G
Sbjct: 3294 EGEDGKLGHG 3303
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
LA+T G++FS+GNG G+LG G+D P+ + L G V G S T
Sbjct: 30 QTLAVTDTGLLFSFGNGDYGKLG--RGGSDGCKLPKLVDKLQGQHAVIACCGNQFSVILT 87
Query: 100 QDGFLYA 106
+ G +Y
Sbjct: 88 KTGTVYT 94
>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
harrisii]
Length = 552
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR++ L I
Sbjct: 155 VIEVACGSHHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRKVTGCLQNKIATTI 211
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A + G +Y WG+N GQ+G L + P P + Q I+V +
Sbjct: 212 ACGQMCSMAVVESGEVYVWGYNGNGQLG----LGSSGNQPTPCRIAA---LQGIRVHKIV 264
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
CG HTL L D+ L+ G N Y QL G +Q S T +SV E + I + H
Sbjct: 265 CGYAHTLVLTDEGHLYAWGANSYGQLGTGNKSNQ-SYPTPVSV-EKDRVIEIAACHSAHT 322
Query: 209 NSAR 212
++A+
Sbjct: 323 SAAK 326
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+ T IACG +A+ + G V+ WG GQLG SSG P I AL G+ V +I
Sbjct: 207 IATTIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGIRVHKIV 264
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV-A 148
G H+ T +G LYAWG N+ GQ+G K + P P+S +D +V+++ A
Sbjct: 265 CGYAHTLVLTDEGHLYAWGANSYGQLGTGNKSNQSY--PTPVSVEKD------RVIEIAA 316
Query: 149 CGSRHTLA 156
C S HT A
Sbjct: 317 CHSAHTSA 324
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+DH + ++ G H + T EG V++WG+ + QLG + T+ + P I
Sbjct: 90 PRRVDHLCGKKIACLSYGSGPHVVIATDEGEVYTWGHNAYNQLG--NGTTNHGLVPTHIS 147
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L V++++ G HS T DG ++AWG+NN GQVG + P P +
Sbjct: 148 TNLGNRKVIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRKVTGCL 203
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN +ACG ++A+ + ++ G+N QL +G
Sbjct: 204 --QNKIATTIACGQMCSMAVVESGEVYVWGYNGNGQLGLG 241
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V I CG+ H L LT EG +++WG S GQLG +G +N +
Sbjct: 249 PCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWGANSYGQLG---TGNKSNQSYPTPVS 305
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ V++I+A SAA+TQ G +Y WG G V
Sbjct: 306 VEKDRVIEIAACHSAHTSAAKTQSGHIYMWGQCRGQSV 343
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 9/155 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P + DL + DIA G H ALT +G V+ WG G G+LG+ + + M
Sbjct: 233 TQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMV 292
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHD 127
P+++ L+ ++Q+S GG HS A T+DG ++++G + G++G K L+L +
Sbjct: 293 PQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIMI 352
Query: 128 PHP---MSWSEDFDSQNIKVVDVACGSRHTLALCD 159
P P + +++ + +ACG RHTLA+ +
Sbjct: 353 PPPEGSFNHADEEEEGKWSAKWIACGGRHTLAIVE 387
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 9 PLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
P + Q+F +P R+ ++ + IA G H LAL ++G + +WGN GQLG + T
Sbjct: 179 PPGDIKQIF-VPVRVQGLENVSI--IAVGAFHNLALEEDGRLLAWGNNEYGQLG--TGDT 233
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P + L L +V I+AGGWHS A T G +Y WG G++G P
Sbjct: 234 QPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVP 293
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
++ + D ++ V+CG H++AL D ++ G ++ +L G V+
Sbjct: 294 QKVNLLAEED-----IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVT 341
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 53/231 (22%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G + LA+ +G +F+WG RG LG+P N+ P ++AL+ + + Q +
Sbjct: 40 VRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENI-PSRVKALANVKITQAAI 98
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEG---------KLDLVV---------------- 125
GGWH A G YAWG N GQ G E + D+V+
Sbjct: 99 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAG 158
Query: 126 --------HDPHPMSWSEDFDSQNIK-------------VVDVACGSRHTLALCDDNSLW 164
+ H +W + + +IK V +A G+ H LAL +D L
Sbjct: 159 GTHSVVLTREGHVWTWGQPWPPGDIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLL 218
Query: 165 GCGWNEYNQLSMGCGVSQVSVMTRLSVPEH-VKNCPIVKLFAEHWNSARLS 214
G NEY QL G G +Q T VP H + + +V + A W+S L+
Sbjct: 219 AWGNNEYGQL--GTGDTQ---PTSHPVPVHGLDDLTLVDIAAGGWHSTALT 264
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 20/130 (15%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ +WG+G GQLG GT+ E + AL V + +G +S A DG ++ WG
Sbjct: 7 IIAWGSGEDGQLGI---GTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG 63
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ-----NIKVVDVACGSRHTLALCDDNSL 163
WN G +G H P + +E+ S+ N+K+ A G H LA+ D
Sbjct: 64 WNQRGTLG---------HPPE--TKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRA 112
Query: 164 WGCGWNEYNQ 173
+ G NEY Q
Sbjct: 113 YAWGGNEYGQ 122
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Query: 104 LYAWGWNNGGQVGV----EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
+ AWG GQ+G+ E + VV P S V V GSR++LA+CD
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYS-----------VRSVVSGSRNSLAICD 55
Query: 160 DNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
D +++ GWN+ L ++ +R+ +VK
Sbjct: 56 DGTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVK 92
>gi|350994396|ref|NP_001017352.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
gi|89272755|emb|CAJ83624.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
Length = 599
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V +ACG H +ALT +G VF WG + GQ+G SGT AN PR + A L VV I
Sbjct: 199 VIQVACGSHHSMALTSDGEVFCWGYNNCGQVG---SGTTANQSVPRRVSATLQSKVVVSI 255
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+AG S A T +G +Y WG+N GQ+G+ + ++ P + ++ + ++ V
Sbjct: 256 AAGQSSSMAVTDNGHVYCWGYNGTGQLGIGNTGNQLM--PCRLVFAHP-----VCIIQVV 308
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G HTLAL D L+ G N + QL +G +Q +
Sbjct: 309 LGYAHTLALSDQGVLYAWGANSHGQLGIGNKSNQTA 344
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+D + D++ G H L ++G V+SWG+ QLG + + P ++
Sbjct: 133 IPRRLDVLCGKRIVDLSYGSGPHILVCNEDGEVYSWGHNGYSQLG--NGNAIQGVAPVQV 190
Query: 78 -RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L V+Q++ G HS A T DG ++ WG+NN GQVG + V P S
Sbjct: 191 CMELLAKKVIQVACGSHHSMALTSDGEVFCWGYNNCGQVGSGTTANQSV----PRRVSAT 246
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S+ VV +A G ++A+ D+ ++ G+N QL +G
Sbjct: 247 LQSK--VVVSIAAGQSSSMAVTDNGHVYCWGYNGTGQLGIG 285
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
DL AC F + + TQ VF +G S LG + + + PR + L G
Sbjct: 86 DLASIRQACIFGSAANEAIYTTQNNEVFVFGMNSSNCLG--TGDNQSTIIPRRLDVLCGK 143
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+V +S G G H +DG +Y+WG N Q+G + V P+ + ++
Sbjct: 144 RIVDLSYGSGPHILVCNEDGEVYSWGHNGYSQLGNGNAIQGVA----PVQVCMELLAK-- 197
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
KV+ VACGS H++AL D ++ G+N Q+ G +Q SV R+S K
Sbjct: 198 KVIQVACGSHHSMALTSDGEVFCWGYNNCGQVGSGTTANQ-SVPRRVSATLQSK 250
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 19 MPSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L VV IA G +A+T G V+ WG GQLG ++G + P +
Sbjct: 239 VPRRVSATLQSKVVVSIAAGQSSSMAVTDNGHVYCWGYNGTGQLGIGNTGN--QLMPCRL 296
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
+ ++Q+ G H+ A + G LYAWG N+ GQ+G+ K
Sbjct: 297 VFAHPVCIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIGNK 339
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP R+ + + + G+ H LAL+ +G++++WG S GQLG G +N + ++
Sbjct: 292 MPCRLVFAHPVCIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGI---GNKSN-QTAPVK 347
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNG 112
+ +V+++A SAA++Q G +Y WG G
Sbjct: 348 VGTNERMVEVTACHSTNISAAKSQSGQVYMWGLCRG 383
>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
Length = 1164
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 14/152 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA G D LAL +G V+SWG + G+LG + T + P ++ L+ V I+A
Sbjct: 781 VVAIAAGKDFSLALKSDGTVWSWGQNTYGELG--NGTTTRSSVPVQVALLTD--VKAIAA 836
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +H A +DG ++AWG+N G++G + +S S S + +A G
Sbjct: 837 GDYHGVALKKDGSVFAWGYNGNGELG----------NSSTISQSTPVQSGVTGIKGIAAG 886
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
HTLAL D ++W G+N Y QL G S+
Sbjct: 887 PYHTLALKSDGTVWSWGYNGYGQLGNGNNTSR 918
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
+H + + +G V+ WG GQLG +S + + P ++ L+G+ + I+ G H+ A
Sbjct: 639 NHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTS--VPGKVINLTGMKM--IAGGENHTVAL 694
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
DG L+ WG+N GQ+G D +S S V+ G H+LAL
Sbjct: 695 RSDGTLHTWGYNGYGQLG---------DDSTTTRYSPVQVSTLTNWTAVSAGENHSLALK 745
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQ 182
D ++W G+N Y QL G SQ
Sbjct: 746 SDGTVWAFGYNGYGQLGDGTTSSQ 769
Score = 66.6 bits (161), Expect = 8e-09, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 79/173 (45%), Gaps = 22/173 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G +H +AL +G + +WG GQLG S+ T P ++ L+ V SAG
Sbjct: 684 IAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTT--RYSPVQVSTLTNWTAV--SAGEN 739
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSR 152
HS A DG ++A+G+N GQ+G D S +++ VV +A G
Sbjct: 740 HSLALKSDGTVWAFGYNGYGQLG----------DGTTSSQRTPVQVKDLTGVVAIAAGKD 789
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
+LAL D ++W G N Y +L G TR SVP V VK A
Sbjct: 790 FSLALKSDGTVWSWGQNTYGELGNG-------TTTRSSVPVQVALLTDVKAIA 835
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/101 (39%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RALSGLG-VVQI 88
+ IA G H LAL +G V+SWG GQLG + N R + A+ GL + I
Sbjct: 880 IKGIAAGPYHTLALKSDGTVWSWGYNGYGQLG------NGNNTSRSVPAAIPGLASIASI 933
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+AG S A DG LY+WG N GQ+G +D V PH
Sbjct: 934 AAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNV--PH 972
Score = 36.6 bits (83), Expect = 8.3, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 23/102 (22%)
Query: 81 SGLGVVQISAG--GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+ LG V ++ G H+ DG ++ WG+N GQ+G + + +
Sbjct: 625 AALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLG---------------TGTSNST 669
Query: 139 SQNIKVVD------VACGSRHTLALCDDNSLWGCGWNEYNQL 174
S KV++ +A G HT+AL D +L G+N Y QL
Sbjct: 670 SVPGKVINLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQL 711
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ V +ACG LALT++G VFSWG+G G+LG G++ + P EI
Sbjct: 3209 PKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG--RGGSEGSATPHEI 3266
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LSG+GV+QI G S A T+ G ++ WG + ++G G D V P P+
Sbjct: 3267 ERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIG----- 3319
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +V+ VA G+ H LA+ D ++ G N++ Q G
Sbjct: 3320 GLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3359
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ D+ACG H A++ +G +++WG G G+LG+ + T ++P+++ AL+G V+Q++
Sbjct: 3168 IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNAT--QLKPKQVTALAGRRVIQVAC 3225
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T+DG +++WG + G++G G PH E I V+ +
Sbjct: 3226 GSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSAT--PH-----EIERLSGIGVIQIE 3278
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG++ +LAL +W G +Y +L G
Sbjct: 3279 CGAQFSLALTRAGEVWTWGKGDYYRLGHG 3307
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L V + CG +ALT+ G V++WG G +LG+ S D P+++
Sbjct: 4381 LPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS--VDHVRRPKKVA 4438
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G +Y WG N+ GQ+G +G + + P ++
Sbjct: 4439 ALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG-DGTVT-AIQRPRLVA-----A 4491
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 4492 LQGKHIVKVTCGSAHTLAL 4510
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ + + V +A G HCLALT EG V++WG G G+LG+ G + + P+
Sbjct: 4221 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH---GNRMSYDRPK 4277
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L+G+ V I+ G HSAA T G + WG G++G D + P +
Sbjct: 4278 LVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALL 4335
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + +D+ACGS TL + DD+++W G +Y +L G
Sbjct: 4336 GY-----RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4374
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P ++ VV +A G H LALT +G VFSWG G G+LG+ + T +PR
Sbjct: 3102 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLD--KPRL 3159
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL + ++ G HSAA + G LY WG G++G G + + +
Sbjct: 3160 VEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG-HGD------NATQLKPKQV 3212
Query: 137 FDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+V+ VACGSR TLAL +D +++ G ++ +L G
Sbjct: 3213 TALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3255
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 84/213 (39%), Gaps = 59/213 (27%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS---------- 66
+ P ++H + V DIACG H A+T G V +WG G G+LG+ S
Sbjct: 4273 YDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 4332
Query: 67 ------------------------------------------GTDANMEPREIRALSGLG 84
G+D P +I +L+GLG
Sbjct: 4333 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 4392
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+++ G S A T+ G +Y WG + ++G G +D H P + Q K+
Sbjct: 4393 VIKVECGSQFSVALTKSGAVYTWGKGDFHRLG-HGSVD---HVRRPKKVAA---LQGKKI 4445
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +A GS H +A D ++ G N+ QL G
Sbjct: 4446 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDG 4478
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V I CG LALT+ G V++WG G +LG+ G +P+ I
Sbjct: 3263 PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH--GGDQHVRKPQPIGG 3320
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWS 134
L G V+ ++ G H A T G +YAWG N+ GQ G V K LV+
Sbjct: 3321 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI--------- 3371
Query: 135 EDFDSQNIKVVDVACGSRHTLA 156
D+ + V VACGS H++A
Sbjct: 3372 -GLDA--VFVNRVACGSSHSIA 3390
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGV--VQISA 90
I+ G ++Q+G VF+ G G+ G+LG G N+ P ++ L V V + +
Sbjct: 3065 ISGGSKSLFIVSQDGKVFACGEGTNGRLGL---GVTHNVPLPHQLPVLHQYVVKKVAVHS 3121
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A T DG +++WG G++G + L P E ++ I+ DVACG
Sbjct: 3122 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL--DKPR---LVEALRAKKIR--DVACG 3174
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S H+ A+ L+ G EY +L G +Q+
Sbjct: 3175 SSHSAAISSQGELYTWGLGEYGRLGHGDNATQLK 3208
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ + + + D+A G H L LT EG+V++WG+G G+LG + +++++P
Sbjct: 708 VPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLG--NGNCNSSLQPIL 765
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG-GQVGVEGKLDLVVHDPHPMSWSE 135
+ L V +I AG S A T +G LY+WG + G VE + P +S
Sbjct: 766 VETLP--RVQRIFAGAQSSMALTTEGHLYSWGKASCLGHQQVERSVQ-GCSVPRLVS--- 819
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
Q+ ++VDVA G H LAL ++G G N+ Q+
Sbjct: 820 --SLQHKRLVDVAVGVAHCLALTSCGEVFGWGRNDSQQI 856
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
LD V + CG + A+T G +++WG G+ G+LG+ +S D P + AL+ ++
Sbjct: 664 LDRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNS--DDQCVPAIVMALAEYEII 721
Query: 87 QIS--AGGWHSAARTQDGFLYAWGWNNGGQVG 116
++ +G HS T +G +YAWG + G++G
Sbjct: 722 DVALGSGDAHSLCLTSEGLVYAWGDGDYGKLG 753
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 20 PSRMDHFLDLVVTDIA--CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ + IA C H LA+ +SWG G +LG+ T A P +I
Sbjct: 604 PQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGH--GDTHARAVPTKI 661
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL V + G +SAA T G LY WG G++G G D M+ +E
Sbjct: 662 SALDRC-VKAVFCGCSYSAAITWSGNLYTWGRGTYGRLG-HGNSDDQCVPAIVMALAE-- 717
Query: 138 DSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
+++DVA GS H+L L + ++ G +Y +L G S + + ++P
Sbjct: 718 ----YEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVETLPR-- 771
Query: 196 KNCPIVKLFAEHWNSARLSVPEH 218
+ ++FA +S L+ H
Sbjct: 772 ----VQRIFAGAQSSMALTTEGH 790
>gi|160774403|gb|AAI55388.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
Length = 530
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V +ACG H +ALT +G VF WG + GQ+G SGT AN PR + A L VV I
Sbjct: 130 VVQVACGSHHSMALTSDGEVFCWGYNNCGQVG---SGTTANQSVPRRVSATLQSKVVVSI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+AG S A T +G +Y WG+N GQ+G+ + ++ P + ++ + ++ V
Sbjct: 187 AAGQSSSMAVTDNGHVYCWGYNGTGQLGIGNTGNQLM--PCRLVFAHP-----VCIIQVV 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G HTLAL D L+ G N + QL +G +Q +
Sbjct: 240 LGYAHTLALSDQGVLYAWGANSHGQLGIGNKSNQTA 275
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 10/161 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+D + D++ G H L ++G V+SWG+ QLG + + P ++
Sbjct: 64 IPRRLDVLCGKRIVDLSYGSGPHILVCNEDGEVYSWGHNGYSQLG--NGNAIQGVAPVQV 121
Query: 78 -RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L VVQ++ G HS A T DG ++ WG+NN GQVG + V P +S +
Sbjct: 122 CMELLAKKVVQVACGSHHSMALTSDGEVFCWGYNNCGQVGSGTTANQSV--PRRVSAT-- 177
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q+ VV +A G ++A+ D+ ++ G+N QL +G
Sbjct: 178 --LQSKVVVSIAAGQSSSMAVTDNGHVYCWGYNGTGQLGIG 216
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
DL AC F + + TQ VF +G S LG + + + PR + L G
Sbjct: 17 DLASIRQACIFGSAANEAIYTTQNNEVFVFGMNSSNCLG--TGDNQSTIIPRRLDVLCGK 74
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+V +S G G H +DG +Y+WG N Q+G + V P+ + ++
Sbjct: 75 RIVDLSYGSGPHILVCNEDGEVYSWGHNGYSQLGNGNAIQGVA----PVQVCMELLAK-- 128
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
KVV VACGS H++AL D ++ G+N Q+ G +Q SV R+S K
Sbjct: 129 KVVQVACGSHHSMALTSDGEVFCWGYNNCGQVGSGTTANQ-SVPRRVSATLQSK 181
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 7/150 (4%)
Query: 19 MPSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L VV IA G +A+T G V+ WG GQLG ++G + P +
Sbjct: 170 VPRRVSATLQSKVVVSIAAGQSSSMAVTDNGHVYCWGYNGTGQLGIGNTGN--QLMPCRL 227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD----LVVHDPHPMSW 133
+ ++Q+ G H+ A + G LYAWG N+ GQ+G+ K + + V M
Sbjct: 228 VFAHPVCIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIGNKSNQTAPVKVGTNERMVE 287
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
S NI G + LC SL
Sbjct: 288 VTACHSTNISAAKSQSGQVYMWGLCRGQSL 317
>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
Length = 993
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 87/163 (53%), Gaps = 18/163 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ IACG H LAL++ G +F+WG GQLG + S T P+ + LSG+ +V
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPT-----PQAVEHLSGVPLV 162
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QISAG HS A + G +Y+WG N+ GQ+G+ G D + P S E D+Q ++
Sbjct: 163 QISAGKAHSMALSMSGNVYSWGRNDLGQLGL-GHTD---GEDFP-SLIETLDNQQVEF-- 215
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ACG HT L D ++ G +Y QL G +Q + RL
Sbjct: 216 LACGGSHTALLTTDGLVFTFGAGKYGQL--GHNSTQNELRPRL 256
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G V+SWG GQLG TD P I
Sbjct: 150 PQAVEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGL--GHTDGEDFPSLIET 207
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG H+A T DG ++ +G GQ+G ++ P +E +
Sbjct: 208 LDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNS----TQNELRPRLVTELAGN 263
Query: 140 QNIKVVDVACGSRHTLALCDD 160
+V +ACG RHTLA D
Sbjct: 264 ---RVTQIACGRRHTLAYVSD 281
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 7/142 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
PS ++ + V +ACG H LT +G+VF++G G GQLG+ S T + PR +
Sbjct: 201 FPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNS--TQNELRPRLVT 258
Query: 79 ALSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED- 136
L+G V QI+ G H+ A D G ++++G GQ+G G + ++ P + +E+
Sbjct: 259 ELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEEL 318
Query: 137 -FDSQ--NIKVVDVACGSRHTL 155
F+S+ + ++V +A G++ L
Sbjct: 319 KFESRTSDKELVMIAGGNQSVL 340
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q ++ +ACG H+LAL L+ G N + QL G G S+ T +V EH+ P
Sbjct: 104 QEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQL--GVGRLFASIPTPQAV-EHLSGVP 160
Query: 200 IVKLFAEHWNSARLSV 215
+V++ A +S LS+
Sbjct: 161 LVQISAGKAHSMALSM 176
>gi|357121203|ref|XP_003562310.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 480
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 24/175 (13%)
Query: 14 SQVFHMPSR-MDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDA 70
++V + +R +D +LV + ++CG H A+++ G V++WG GS GQLG+ S D
Sbjct: 209 ARVLNAYARFLDDAPELVKIVRVSCGEYHAAAISEHGEVYTWGLGSMGQLGHRSLQSGDK 268
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
+ PR + AL G+ +S GG HS A T+ G LYAWG + GQ+G+ P
Sbjct: 269 ELIPRRVVALEGMVAGDVSCGGVHSCAVTEGGTLYAWGGGHVGQLGL---------GPQS 319
Query: 131 MSWS-----EDFDSQNIKVVD-------VACGSRHTLALCDDNSLWGCGWNEYNQ 173
+S D +NI V+ V CG HTL D ++G G+N Y Q
Sbjct: 320 GFFSCALNGSDMLLRNIPVLVIPSGVRLVTCGHSHTLISMKDGRIYGWGYNSYGQ 374
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 41/206 (19%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQISAG 91
DIACG +H A+ +G +F+WG GQLG GT+ + EP+++ A+ V +S G
Sbjct: 64 DIACGREHTAAVASDGSLFTWGANDFGQLG---DGTEESAKEPKKVNAIETEFVKSVSCG 120
Query: 92 GWHSAA----RTQDGF-----LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+AA R DG L+ WG N G +P + F + N
Sbjct: 121 AHCTAAIAEPRENDGTISKSRLWVWGQNQGSD--------------YPRLFWGAF-APNT 165
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC------GVSQVSVMTRL--SVPEH 194
++ V+CG+ H +AL +D L G+NEY QL GC G ++ R PE
Sbjct: 166 VILQVSCGAVHVMALSEDGVLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDDAPEL 225
Query: 195 VKNCPIVKLFAEHWNSARLSVPEHAK 220
VK IV++ +++A +S EH +
Sbjct: 226 VK---IVRVSCGEYHAAAIS--EHGE 246
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSG------TDAN 71
+P R+ +V D++CG H A+T+ G +++WG G GQLG P SG ++
Sbjct: 271 IPRRVVALEGMVAGDVSCGGVHSCAVTEGGTLYAWGGGHVGQLGLGPQSGFFSCALNGSD 330
Query: 72 MEPREIRALS-GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
M R I L GV ++ G H+ +DG +Y WG+N+ GQ E P P
Sbjct: 331 MLLRNIPVLVIPSGVRLVTCGHSHTLISMKDGRIYGWGYNSYGQAANEK--STYAWYPSP 388
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ W +V +A G H+ L D +SL
Sbjct: 389 VDWCVG------EVRRLAAGGGHSAVLTDASSL 415
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 21/162 (12%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG----- 82
+ V+ ++CG H +AL+++G++ +WG GQLG + ++ R + A +
Sbjct: 164 NTVILQVSCGAVHVMALSEDGVLQAWGYNEYGQLGRGCT-SEGLQGARVLNAYARFLDDA 222
Query: 83 ---LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG----VEGKLDLVVHDPHPMSWSE 135
+ +V++S G +H+AA ++ G +Y WG + GQ+G G +L+ +
Sbjct: 223 PELVKIVRVSCGEYHAAAISEHGEVYTWGLGSMGQLGHRSLQSGDKELIPRRVVAL---- 278
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + DV+CG H+ A+ + +L+ G QL +G
Sbjct: 279 ----EGMVAGDVSCGGVHSCAVTEGGTLYAWGGGHVGQLGLG 316
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 104 LYAWGWNNGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y WG+N GQ +GK L + P + D +N++ +D+ACG HT A+ D S
Sbjct: 21 IYIWGYNQSGQTARKGKDRHLRIPKSLPPKLFKCRDGENLRWIDIACGREHTAAVASDGS 80
Query: 163 LWGCGWNEYNQLSMG 177
L+ G N++ QL G
Sbjct: 81 LFTWGANDFGQLGDG 95
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 75/149 (50%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR-ALSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L VV I
Sbjct: 140 VIEVACGSYHSLVLTSDGEVFAWGCNNSGQVG---SGSTANQPIPRRVTGCLQNRVVVNI 196
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G+ + P + Q I+V VA
Sbjct: 197 ACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGN----HSTPCRIAA---LQGIRVQRVA 249
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L DD ++ G N Y QL G
Sbjct: 250 CGYAHTLVLTDDGQVYAWGANSYGQLGTG 278
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ P I
Sbjct: 75 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLG--NGTTNHGSVPCHIS 132
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG NN GQVG + P P +
Sbjct: 133 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGS----TANQPIPRRVTGCL 188
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ D ++ G+N QL +G
Sbjct: 189 --QNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLG 226
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG + P I
Sbjct: 180 IPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHST--PCRI 237
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T DG +YAWG N+ GQ+G K + P P+ +D
Sbjct: 238 AALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 294
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 295 -----RIIEIAACHSTHTSA 309
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L +T +F G G LG + +EPR + +LSG
Sbjct: 27 ELQLIRQACVFGSAGNEVLYMTVNDEIFVLGTNCCGCLGL--GDIQSTIEPRRLDSLSGK 84
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 85 KIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLG-NGTTN---HGSVPCHISTNLS--NK 138
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G N Q+ G +Q +P V C
Sbjct: 139 QVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQ-------PIPRRVTGC 187
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT +G V++WG S GQLG +G +N
Sbjct: 234 PCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQLG---TGNKSNQSYPTPVV 290
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 291 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 328
>gi|427781807|gb|JAA56355.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 326
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 12/166 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++CG H LALT +G + SWGNGS GQLG+ S ++ PR + L+G+ + +A
Sbjct: 154 VCRVSCGHGHQLALTMDGQLLSWGNGSHGQLGHGS--LESAQSPRPVEPLAGVVMAGAAA 211
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GGWHSAA + G LY WGWN GQ+ E K P+S +++ V + G
Sbjct: 212 GGWHSAALSDAGDLYLWGWNLNGQLATEPK-------EKPLSALPLLLDMDVRAVSL--G 262
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGC-GVSQVSVMTRLSVPEHV 195
SRHT AL ++S W G N Y QL G G++Q + +L+ + V
Sbjct: 263 SRHTAALASNSSSWAWGSNAYGQLGPGADGMTQSAKPVQLAAKDAV 308
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVVNI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG++ GQ+G+ G + P P + Q I+V A
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGSGN----QPTPCRVAA---LQGIRVQRAA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQVYVWGANSYGQLGTG 292
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D V ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 147 TNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ D ++ G++ QL +G
Sbjct: 203 --QNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLG 240
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SG P +
Sbjct: 194 IPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V + + G H+ T +G +Y WG N+ GQ+G K + P+P +
Sbjct: 252 AALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSN----QPYPTPIIVEK 307
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
D +++++ AC S HT A
Sbjct: 308 D----RIIEIAACHSTHTSA 323
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +L+G
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLTGK 98
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
V +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 99 KVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 152
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G +Q +P V C
Sbjct: 153 RVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-------PIPRRVTGC 201
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V ACG+ H L LT EG V+ WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQLG---TGNKSNQPYPTPII 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
Length = 994
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV 85
F+ + V +ACG HC+ALT +G +FSWG+ GQLG A I+ ++ +
Sbjct: 109 FVGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANI 168
Query: 86 VQISAGGWHS-AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VQI+ G HS A + DG L+AWG N+ GQ+G+ + + P + ++ I +
Sbjct: 169 VQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFI----GPTTVNK---LMGIPI 221
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+A G+ H+L L +++G G N + Q+
Sbjct: 222 CQLAAGASHSLVLTPSGTVFGWGKNMFGQI 251
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR------EIRALSG 82
L + IACG H + L +G VFS GN QLG+ N+ ++ G
Sbjct: 52 LKIRQIACGRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVG 111
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ V+ ++ G H A T DG L++WG N GQ+GVE ++++V +P ++ + NI
Sbjct: 112 IHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVE-RMNVVAKARYPR--IQEINLANI 168
Query: 143 KVVDVACGSRHTLAL-CDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
V +ACGS H+LAL D L G N++ QL +G S + T
Sbjct: 169 --VQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGPTT 212
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 10/148 (6%)
Query: 31 VTDIACGFDHCLAL-TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+ IACG +H LAL + +G++ +WG GQLG + ++ + P + L G+ + Q++
Sbjct: 168 IVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTR--ESFIGPTTVNKLMGIPICQLA 225
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG HS T G ++ WG N GQ+G + D++ +P S + +Q KV+ +AC
Sbjct: 226 AGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDIL----YP-SLVKLLRTQ--KVIRLAC 278
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G ++A+ L+ G Y QL G
Sbjct: 279 GEDFSVAVTATGGLFTFGAGTYGQLGHG 306
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 24/185 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ ++ + + + +A G H L LT G VF WG GQ+G + + P ++
Sbjct: 210 PTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIG--QNEQRDILYPSLVKL 267
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V++++ G S A T G L+ +G GQ+G H SE F
Sbjct: 268 LRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLG------------HGNQNSELFPK 315
Query: 140 QNIK-----VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
Q ++ V+DVACG HTLA+ +N L+ G N QL G+ V T + +P
Sbjct: 316 QVMELMGSVVLDVACGRCHTLAI-TENKLYAFGLNTSGQL----GLLNVKHTTSIPLPIP 370
Query: 195 VKNCP 199
++ P
Sbjct: 371 IEKQP 375
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 54 GNGSRGQLGYPSSGTDANMEPREIRALSG----LGVVQISAGGWHSAARTQDGFLYAWGW 109
GN S GQLG G A R + + L + QI+ G HS DG +++ G
Sbjct: 22 GNTSDGQLGL---GGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGN 78
Query: 110 NNGGQVGVEGKLDLVVHDPH---PMSWSEDFDSQ--NIKVVDVACGSRHTLALCDDNSLW 164
N+ Q+G +G + P+ + W D I V+ VACG H +AL +D L+
Sbjct: 79 NDFYQLGHDG----IKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLF 134
Query: 165 GCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
G N Y QL GV +++V+ + P
Sbjct: 135 SWGSNVYGQL----GVERMNVVAKARYPR 159
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
L G + GQ+G+ G + V + +++F +K+ +ACG H++ L DD S+
Sbjct: 18 LLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNF----LKIRQIACGRHHSVMLLDDGSV 73
Query: 164 WGCGWNEYNQL 174
+ CG N++ QL
Sbjct: 74 FSCGNNDFYQL 84
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 18/173 (10%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q +P++++ ++V I G +H LAL+ +G V++WG GQLG + T+ +
Sbjct: 170 NQDSSIPTKVEFLSNIVA--IEAGAEHSLALSNDGKVWAWGRNEFGQLG--NGETEKSNI 225
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--------VEGKLDLVV 125
PR ++ L + I+ G HS A DG ++AWG+N+ GQ+G +G+L
Sbjct: 226 PRLVKNLEN--IEMIAGGDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKR 283
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
+ P+ + + KV V+ G +H+ AL ++ ++ GWNEY QL G
Sbjct: 284 NKTEPVKLNGLYG----KVKQVSAGIKHSTALTENGEVYAWGWNEYGQLGNGS 332
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 22 RMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS 81
++D D+V D DH LA+T+ G V+ WG S+G++ + G P +I L
Sbjct: 79 KVDELYDVVSLD--SDMDHTLAITKHGTVWGWGYNSKGEI---TEGGKNIARPVQINGLK 133
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
+VQ+S G HS A Q G +++WG N GQ+G D + P + + +
Sbjct: 134 --DIVQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSI--PTKVEFLSN----- 184
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
+V + G+ H+LAL +D +W G NE+ QL G G ++ S ++P VKN +
Sbjct: 185 --IVAIEAGAEHSLALSNDGKVWAWGRNEFGQL--GNGETEKS-----NIPRLVKNLENI 235
Query: 202 KLFA 205
++ A
Sbjct: 236 EMIA 239
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 21/169 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIR------ALSGL--G 84
IA G +H LAL +G +++WG S GQ+G SS + + + RE R L+GL
Sbjct: 238 IAGGDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGK 297
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V Q+SAG HS A T++G +YAWGWN GQ+G D V P+ ++ +
Sbjct: 298 VKQVSAGIKHSTALTENGEVYAWGWNEYGQLGNGSMKDSKV----PLR-----NNVGRSI 348
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQL---SMGCGVSQVSVMTRLS 190
+D+ GS H+ A+ + ++ G Y QL + G ++++ M R++
Sbjct: 349 IDIETGSYHSFAVDESGVIYAWGDATYGQLGDGTFGKDGNRITYMVRMN 397
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 17/160 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P +++ D+V ++ G H LAL Q G V+SWG GQLG +GT+ + P ++
Sbjct: 126 PVQINGLKDIV--QVSTGLVHSLALDQSGAVWSWGENIYGQLG---NGTNQDSSIPTKVE 180
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
LS +V I AG HS A + DG ++AWG N GQ+G G+ + + P + +
Sbjct: 181 FLS--NIVAIEAGAEHSLALSNDGKVWAWGRNEFGQLG-NGETEK-SNIPRLVK-----N 231
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
+NI++ +A G H+LAL D ++W G+N Q+ G
Sbjct: 232 LENIEM--IAGGDNHSLALDHDGAIWAWGYNSNGQIGDGS 269
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+ DI G H A+ + G++++WG+ + GQLG + G D N +R
Sbjct: 348 IIDIETGSYHSFAVDESGVIYAWGDATYGQLGDGTFGKDGNRITYMVR 395
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV I+AGG+ S DG ++ G NN GQ+G + D + E +D V
Sbjct: 36 VVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKD----SSYFGKVDELYD-----V 86
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V + HTLA+ ++WG G+N +++ G
Sbjct: 87 VSLDSDMDHTLAITKHGTVWGWGYNSKGEITEG 119
>gi|270015228|gb|EFA11676.1| hypothetical protein TcasGA2_TC008540 [Tribolium castaneum]
Length = 835
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 19/168 (11%)
Query: 7 SGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS 66
S P K++ +F + + V ++CG H LALT G V++WG+ + GQLG
Sbjct: 398 SSPPKLVQTLFDLKVK--------VLSVSCGRKHTLALTDYG-VYAWGSNTYGQLGLGPL 448
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
++ P+ I L+ +VQ+SAG +H+ A + G +Y WGW GQ+G G D + +
Sbjct: 449 IQESPY-PQIITNLAFKKMVQVSAGQYHTIALSSSGEVYTWGWGIHGQLG-HGDCDNIYY 506
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P + + KVV VA G H+L L + L+G G N + QL
Sbjct: 507 -PKLLPFQH-------KVVQVAAGHAHSLILTREGKLFGFGSNVFGQL 546
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV--VQISAG 91
++CGF+H A+ + +++ G S G LG T ++ P+ ++ L L V + +S G
Sbjct: 363 LSCGFEHA-AVVRNSCLYTMGVSSSGCLGLGPLLTQSS-PPKLVQTLFDLKVKVLSVSCG 420
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
H+ A T G +YAWG N GQ+G+ L+ P+P + + K+V V+ G
Sbjct: 421 RKHTLALTDYG-VYAWGSNTYGQLGLG---PLIQESPYPQIIT---NLAFKKMVQVSAGQ 473
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMG 177
HT+AL ++ GW + QL G
Sbjct: 474 YHTIALSSSGEVYTWGWGIHGQLGHG 499
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL--GVVQI 88
V +A G H L LT+EG +F +G+ GQL Y ++ + P I + + + +I
Sbjct: 516 VVQVAAGHAHSLILTREGKLFGFGSNVFGQLEYCQLDSNKSTRPVLILIMPDIYTPIEKI 575
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD----PHPMSWSED---FDSQN 141
+ G +H+ A D +Y WG + +V + +L + P SW + N
Sbjct: 576 ATGYFHNIAVRADQEVYTWGA-SPQEVRILQSKNLQKQNGLSLKGPDSWKASVHIYSGGN 634
Query: 142 IKVVD-VACGSRHTLALCDDNSLWGCGWNEYNQLS 175
K ++ V G RH++ L + LW G N+ ++LS
Sbjct: 635 KKPIEQVVVGYRHSVILHNGKLLW--GKNKDDELS 667
>gi|340370446|ref|XP_003383757.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like
[Amphimedon queenslandica]
Length = 529
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 7/165 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R++ L ++ IA G D H LALT++G +++WG GQLG S+ +N+
Sbjct: 65 PKRIESLKGLNISSIAYGSDPHVLALTEDGTIYAWGANGYGQLGRGSTSVHSNLPKPVNH 124
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ V +++ GG+HS A + G +Y+WG+NN GQ+G ++P+ ++ D
Sbjct: 125 ALGGVIVSKVACGGFHSLALSNKGDVYSWGFNNCGQLGCGDTTSR--YNPNRVTGLLDGK 182
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+ + V C + AL + + G N QL +G + Q+
Sbjct: 183 T----CIHVTCNHTSSFALTGEGEILSWGQNGSGQLGIGSTLQQL 223
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 18 HMPSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P+R+ LD + C ALT EG + SWG GQLG S T ++P
Sbjct: 170 YNPNRVTGLLDGKTCIHVTCNHTSSFALTGEGEILSWGQNGSGQLGIGS--TLQQLQPVN 227
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
++ ++ + QI G H+ A ++ G +YAWG N GQ+G K
Sbjct: 228 VQ-INDAFIDQIVTGYSHALALSECGSIYAWGANTHGQLGNASK 270
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 24 DHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG-TDANMEPREIRALSG 82
D F+D +VT G+ H LAL++ G +++WG + GQLG S + I S
Sbjct: 232 DAFIDQIVT----GYSHALALSECGSIYAWGANTHGQLGNASKQCVSSPTIINNIGRASE 287
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWG 108
+ + +S H +A T G +Y WG
Sbjct: 288 VAAIHLS----HISAATISGKVYIWG 309
>gi|324509125|gb|ADY43843.1| RCC1 and BTB domain-containing protein 1 [Ascaris suum]
Length = 533
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI- 77
PSR+D + +A G H LAL+Q G VFSWG+ + GQLG S T + P +
Sbjct: 65 PSRIDTLSGRAIVSLAYGSGPHVLALSQNGEVFSWGHNAFGQLGLGS--TTVGIAPSLVG 122
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LSG VVQI+ G HS A T G ++AWG N+ GQVG+ V+ P +
Sbjct: 123 DTLSGHNVVQIACGSHHSVAVTDRGEIFAWGRNSCGQVGIGSN----VNQDLPRQVTGHL 178
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ ++ V CG T+AL D ++ G+N QL G
Sbjct: 179 LNRFVR--SVVCGQNSTMALTDGGEVFAWGFNGNGQLGAG 216
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 9/142 (6%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG-GWHSAARTQ 100
+ +T+EG +++ G S LG ++ + +EP I LSG +V ++ G G H A +Q
Sbjct: 35 ILVTKEGELYAIGTNSCSCLG--TNRSQGTLEPSRIDTLSGRAIVSLAYGSGPHVLALSQ 92
Query: 101 DGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
+G +++WG N GQ+G+ + P + N VV +ACGS H++A+ D
Sbjct: 93 NGEVFSWGHNAFGQLGLGSTTVGIA----PSLVGDTLSGHN--VVQIACGSHHSVAVTDR 146
Query: 161 NSLWGCGWNEYNQLSMGCGVSQ 182
++ G N Q+ +G V+Q
Sbjct: 147 GEIFAWGRNSCGQVGIGSNVNQ 168
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGL 83
H L+ V + CG + +ALT G VF+WG GQLG +G +N P + L +
Sbjct: 177 HLLNRFVRSVVCGQNSTMALTDGGEVFAWGFNGNGQLG---AGNLSNQHSPALVIGLHNV 233
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
+ QI+ G HS A T +G L+AWG N GQ+
Sbjct: 234 VIEQIACGFAHSLALTDEGQLFAWGSNTCGQL 265
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQL--GYPSSGTDANMEPR 75
H P+ + ++V+ IACGF H LALT EG +F+WG+ + GQL P S +
Sbjct: 222 HSPALVIGLHNVVIEQIACGFAHSLALTDEGQLFAWGSNTCGQLCANLPRSN-----QTS 276
Query: 76 EIRALSGLGVVQISAGGWH----SAARTQDGFLYAWGWNNG 112
+ S LG + I H + A Q G +Y WG G
Sbjct: 277 PVLVASALGRI-IEVAAVHACNITVAVNQSGKVYMWGQVRG 316
>gi|357393792|ref|YP_004908633.1| hypothetical protein KSE_69180 [Kitasatospora setae KM-6054]
gi|311900269|dbj|BAJ32677.1| hypothetical protein KSE_69180 [Kitasatospora setae KM-6054]
Length = 419
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 82/157 (52%), Gaps = 18/157 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG---YPSSGTDANMEPREIR-----ALSG 82
V IA G +AL ++G V +WGN +GQLG P S T A P ++ G
Sbjct: 190 VKAIAAGDAFSIALLKDGTVKTWGNNDKGQLGVTPLPVSSTAAVPAPTPATRNTAMSIPG 249
Query: 83 LGVVQ-ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
L V+ I+AG H+ A DG +YAWG N+ GQ+G D +V+ P+P+ E D
Sbjct: 250 LTTVKGITAGASHALALLADGHVYAWGLNDKGQLGD----DTIVNKPYPVPVQEVTD--- 302
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
VV +A G+ H+LAL D++L G N+ Q+ G
Sbjct: 303 --VVALAGGATHSLALLQDHTLRAWGANDKGQIGDGT 337
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
V +A G H LAL ++G V +WGN +GQLG GT N P + LS V I+
Sbjct: 140 VEAVAAGGSHALALLKDGTVKAWGNNDKGQLG---DGTAVNTNLPVTVAGLS--DVKAIA 194
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEG---KLDLVVHDPHPMSWSEDFDSQNIKVVD 146
AG S A +DG + WG N+ GQ+GV V P P + + + V
Sbjct: 195 AGDAFSIALLKDGTVKTWGNNDKGQLGVTPLPVSSTAAVPAPTPATRNTAMSIPGLTTVK 254
Query: 147 -VACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ G+ H LAL D ++ G N+ QL
Sbjct: 255 GITAGASHALALLADGHVYAWGLNDKGQL 283
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 41 CLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL-SGL-GVVQISAGGWHSAAR 98
LAL G V +WG +GQLG +GT + E + L +GL GV ++AGG H+ A
Sbjct: 97 ALALLGNGTVEAWGRNDKGQLG---NGTTSATEDAAVPGLVAGLTGVEAVAAGGSHALAL 153
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
+DG + AWG N+ GQ+G +G V+ P++ + D V +A G ++AL
Sbjct: 154 LKDGTVKAWGNNDKGQLG-DGT---AVNTNLPVTVAGLSD-----VKAIAAGDAFSIALL 204
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
D ++ G N+ QL GV+ + V + +VP
Sbjct: 205 KDGTVKTWGNNDKGQL----GVTPLPVSSTAAVP 234
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D+V +A G H LAL Q+ + +WG +GQ+G ++ P A
Sbjct: 294 PVPVQEVTDVVA--LAGGATHSLALLQDHTLRAWGANDKGQIGDGTTTQRNTSVPVPGVA 351
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
GV I+AG H+ A DG + AWG N+ GQ+G
Sbjct: 352 ----GVEAIAAGAAHNLAVLADGTVQAWGLNDKGQLG 384
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 61/143 (42%), Gaps = 25/143 (17%)
Query: 52 SWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA--------GGWHSAARTQDGF 103
+WGN + GQLG S+ T + P + ++G + ISA + A +G
Sbjct: 47 AWGNNANGQLGDGSAKTQ-RLTPVSVVGMAGAELNGISAGGTTSGTTVTGFALALLGNGT 105
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI-----KVVDVACGSRHTLALC 158
+ AWG N+ GQ+G G S +ED + V VA G H LAL
Sbjct: 106 VEAWGRNDKGQLG-NGT----------TSATEDAAVPGLVAGLTGVEAVAAGGSHALALL 154
Query: 159 DDNSLWGCGWNEYNQLSMGCGVS 181
D ++ G N+ QL G V+
Sbjct: 155 KDGTVKAWGNNDKGQLGDGTAVN 177
>gi|307190578|gb|EFN74560.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 1036
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-----PREI-RALSGLG 84
+ DIACG HCLALT +G V++WG GQ+ D N++ PR++ L
Sbjct: 614 ILDIACGHCHCLALTSDGKVYTWGENYCGQI------EDGNIDTFDSVPRQVHHELEKKN 667
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV I+ G + T + +Y WG N+ GQ+ +V ++ ++ + + K+
Sbjct: 668 VVHIACGSKFNVVITDENKIYGWGKNDKGQIS-------IVQSEKYYAYPQEIITISDKI 720
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
V V CG HTLAL + ++ G N Y Q+ +
Sbjct: 721 VKVTCGYDHTLALTNKGEIYAWGDNIYGQIGV 752
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 2 CDHLASGPLKMLSQVFHMPSRMDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQ 60
C + G + V P ++ H L+ V IACG + +T E ++ WG +GQ
Sbjct: 641 CGQIEDGNIDTFDSV---PRQVHHELEKKNVVHIACGSKFNVVITDENKIYGWGKNDKGQ 697
Query: 61 LGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
+ S P+EI +S +V+++ G H+ A T G +YAWG N GQ+GV K
Sbjct: 698 ISIVQS-EKYYAYPQEIITISD-KIVKVTCGYDHTLALTNKGEIYAWGDNIYGQIGVNKK 755
Query: 121 L 121
L
Sbjct: 756 L 756
>gi|162450118|ref|YP_001612485.1| BNR repeat-containing protein [Sorangium cellulosum So ce56]
gi|161160700|emb|CAN92005.1| BNR repeat domain protein [Sorangium cellulosum So ce56]
Length = 1462
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T I G +H LAL Q+G V++WGN GQLG ++ A+ P +I L+ GV I+A
Sbjct: 912 ITAIVTGEEHSLALRQDGTVWAWGNNGNGQLGVGTA--KASQVPVKIPTLN--GVTAIAA 967
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI-KVVDVAC 149
G HS A DG ++AWG N GQ+G D SE + +V+ VA
Sbjct: 968 GANHSLAVRGDGTVWAWGNNAHGQLG----------DGTTSQRSEPVQVSELGQVLRVAG 1017
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
G+ H+LAL D ++W G N + QL + SQ S+ +S H
Sbjct: 1018 GTGHSLALKADGTVWAFGSNSHGQLGVSTSTSQRSIAAPVSGISHA 1063
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
F P++ ++ ++V G D A+T +G +++WG GQLG +G EP +
Sbjct: 1302 FRSPAQFENLKNVV--RFGAGTDSSAAVTADGKIWTWGANYYGQLGI--AGASYYTEPVD 1357
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
I SG + +S G WH DG ++ WG N GGQ+G
Sbjct: 1358 IHDQSGF--IDVSVGDWHVLGIKADGTVWGWGHNGGGQLG 1395
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 12 MLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
+L Q +P+ + D ++ H L ++G + +WG G+ G G+ A
Sbjct: 1097 VLGQARFLPTGVRGAFDSQTVAMSL---HTLVARKDGTIDAWGRDHYGEAG-DFLGSGAR 1152
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
EP+ I +S V ++ G S A +DG ++ WG ++ G +G D P P+
Sbjct: 1153 TEPKRIPGISR--VRSVAVGDRWSMALRKDGSVWTWGISSWGVLGDGKGCDSDFAYPGPL 1210
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
+ ++ ++ + AL D ++WG G+N Y Q
Sbjct: 1211 NQVAALS----DIIQISASLYNGYALKKDGTVWGWGFNSYYQ 1248
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI---RALSGLGVVQISAGGWHSAAR 98
+A +G +++WG+ S+G LG +S T P EI RA+ G A A
Sbjct: 719 VATQTDGTLWAWGDNSQGTLGPEASTTAPGSLPVEIPITRAVFGTAAGGAHALALDGA-- 776
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
G +++WG N+ GQ+G D H P + +V +A G RH+LAL
Sbjct: 777 ---GVVWSWGDNSYGQLGDGTTADRATH-PQALGLQ--------GIVAIAAGKRHSLALR 824
Query: 159 DDNSLWGCGWNEYNQLSMGC 178
D + G + QLS G
Sbjct: 825 GDGRVLAWGDDSAAQLSNGA 844
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV+ AG SAA T DG ++ WG N GQ+G+ G + P+ D Q+
Sbjct: 1314 VVRFGAGTDSSAAVTADGKIWTWGANYYGQLGIAG----ASYYTEPV----DIHDQS-GF 1364
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
+DV+ G H L + D ++WG G N QL G ++ + + LS
Sbjct: 1365 IDVSVGDWHVLGIKADGTVWGWGHNGGGQLGDGTTQTRSTPVLLLS 1410
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 39/184 (21%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLG-VVQI 88
V +A G +AL ++G V++WG S G LG G D++ P + ++ L ++QI
Sbjct: 1164 VRSVAVGDRWSMALRKDGSVWTWGISSWGVLG-DGKGCDSDFAYPGPLNQVAALSDIIQI 1222
Query: 89 SAGGWHSAARTQDGFLYAWGWNN-----GGQVGVE-----GKLDLVVHDP---------- 128
SA ++ A +DG ++ WG+N+ G + G E G D+V D
Sbjct: 1223 SASLYNGYALKKDGTVWGWGFNSYYQELGDRPGCEPAPIPGLSDIVAIDAGDRFGLALKK 1282
Query: 129 ---------------HPMSWSEDFDSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYN 172
P+ + +N+K VV G+ + A+ D +W G N Y
Sbjct: 1283 DGTLWGWGLGGRGYVDPLYFRSPAQFENLKNVVRFGAGTDSSAAVTADGKIWTWGANYYG 1342
Query: 173 QLSM 176
QL +
Sbjct: 1343 QLGI 1346
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 75/182 (41%), Gaps = 48/182 (26%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G+V+SWG+ S GQLG GT A+ +AL G+V I+AG HS A DG + AW
Sbjct: 777 GVVWSWGDNSYGQLG---DGTTADRATHP-QALGLQGIVAIAAGKRHSLALRGDGRVLAW 832
Query: 108 GWNNGGQV---------GVEGKLDLVVHDPH-----------------PMSWSEDFDS-Q 140
G ++ Q+ G + + + V P P S D S Q
Sbjct: 833 GDDSAAQLSNGAARTPNGFKPRKNTVFEWPTAPPWPPARRSTGTLPCTPARKSGDLLSLQ 892
Query: 141 NI----------------KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG-VSQV 183
+ ++ + G H+LAL D ++W G N QL +G SQV
Sbjct: 893 PVRCSNSTLSPALVPMLDRITAIVTGEEHSLALRQDGTVWAWGNNGNGQLGVGTAKASQV 952
Query: 184 SV 185
V
Sbjct: 953 PV 954
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 14/147 (9%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG + L G + +WG S+GQLG G A P +R V +S
Sbjct: 1066 VACGGNSSAVLLPTGDIRTWGENSKGQLGDGVLG-QARFLPTGVRGAFDSQTVAMS---L 1121
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI-KVVDVACGSR 152
H+ +DG + AWG ++ G+ G D + +E I +V VA G R
Sbjct: 1122 HTLVARKDGTIDAWGRDHYGEAG-----DFLGSGAR----TEPKRIPGISRVRSVAVGDR 1172
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCG 179
++AL D S+W G + + L G G
Sbjct: 1173 WSMALRKDGSVWTWGISSWGVLGDGKG 1199
>gi|74183965|dbj|BAE37031.1| unnamed protein product [Mus musculus]
Length = 714
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 67 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 124
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 125 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA----- 177
Query: 139 SQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 178 LQGKKVNRVACGSAHTLA 195
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 25 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 82
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G D H + Q KV+ +A
Sbjct: 83 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGS-------DDHVRRPRQVQGLQGKKVIAIA 135
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 136 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 164
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 180 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPTPRRVTGCLQNKVVVTI 236
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 237 ACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 289
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 290 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 343
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC----GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+D L IAC H + T EG VF+WG+ + QLG + T+ + P
Sbjct: 115 PRRLD---SLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPC 169
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 170 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPTPRRVT 225
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 226 GCL--QNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLG 266
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 12/139 (8%)
Query: 20 PSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 221 PRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPT--PCRVA 278
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 279 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD-- 334
Query: 139 SQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 335 ----RIIEIAACHSTHTSA 349
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +LSG
Sbjct: 67 ELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGK 124
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 125 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 178
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q P V C
Sbjct: 179 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PTPRRVTGC 227
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 274 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 330
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 331 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 368
>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
Length = 531
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI-RALSGLGVVQI 88
V ++ACG H +AL+ +G +++WG + GQ+G SG+ AN PR + L G VV I
Sbjct: 130 VVEVACGSHHSMALSFDGDLYAWGYNNCGQVG---SGSTANQPTPRRVSNCLQGKMVVGI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ ++ + ++ + ++ +A
Sbjct: 187 ACGQTSSMAVVSNGEVYGWGYNGNGQLGLG-------NNGNQLTPCRVAALHGVCILQIA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
CG HTLAL D+ L+ G N Y QL G +Q+S + + E V
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQIMMEKERV 286
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 10/168 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +++ ++ ++ G H + T++G V++WG+ QLG + T+ + P ++
Sbjct: 64 VPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLG--NGTTNQGITPVQV 121
Query: 78 -RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L VV+++ G HS A + DG LYAWG+NN GQVG + P P S
Sbjct: 122 CTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGS----TANQPTPRRVSNC 177
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
Q VV +ACG ++A+ + ++G G+N QL +G +Q++
Sbjct: 178 L--QGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 12/139 (8%)
Query: 20 PSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ + L +V IACG +A+ G V+ WG GQLG ++G + P +
Sbjct: 171 PRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQ--LTPCRVA 228
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ ++QI+ G H+ A T +G LYAWG N GQ+G K + + P + ++
Sbjct: 229 ALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQL--SPVQIMMEKE-- 284
Query: 139 SQNIKVVDV-ACGSRHTLA 156
+VV++ AC S HT A
Sbjct: 285 ----RVVEIAACHSAHTSA 299
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ + + IACG+ H LALT EG++++WG + GQLG +G +N + P +I
Sbjct: 224 PCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPVQIM 280
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ VV+I+A SAA+TQ G +Y WG G V
Sbjct: 281 -MEKERVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSV 318
>gi|224031923|gb|ACN35037.1| unknown [Zea mays]
Length = 220
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 9/144 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG+ H + ++ G ++++G GQLG+ + ++ P ++ AL + QIS G
Sbjct: 4 VACGWRHTITVSDSGNLYTYGWSKYGQLGH--GDFEDHLVPHKVEALKDSTISQISGGWR 61
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ A T +G LY WGWN GQVGV D P +S+ ED K+ VACG RH
Sbjct: 62 HTMALTSEGKLYGWGWNKFGQVGVGNNDDH--SSPGQVSFPED-----QKISQVACGWRH 114
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLAL + +++ G QL G
Sbjct: 115 TLALSEKKNVFSWGRGTSGQLGNG 138
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ D ++ I+ G+ H +ALT EG ++ WG GQ+G ++ D + P ++
Sbjct: 41 VPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNN--DDHSSPGQVS 98
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+ Q++ G H+ A ++ +++WG GQ+G
Sbjct: 99 FPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLG 136
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
+V ++ G H+ + G LY +GW+ GQ+G D +V PH + +D +
Sbjct: 1 MVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLV--PHKVEALKDS-----TI 53
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
++ G RHT+AL + L+G GWN++ Q+ +G S ++S PE K
Sbjct: 54 SQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDH-SSPGQVSFPEDQK 104
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG LALT++G VFSWG+G G+LG G++ + P EI LSG+GV+QI
Sbjct: 3288 VIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVIQI 3345
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D V P P++ + +V+ VA
Sbjct: 3346 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIA-----GLRGRRVIHVA 3398
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H LA+ D ++ G N++ Q G
Sbjct: 3399 VGALHCLAVTDAGQVYAWGDNDHGQQGSG 3427
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L V + CG +ALT+ G V++WG G +LG+ S D P+++
Sbjct: 4471 LPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS--VDHVRRPKKVA 4528
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G +Y WG N+ GQ+G +G + + P ++
Sbjct: 4529 ALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTVT-AIQRPRLVA-----A 4581
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 4582 LQGKHIVKVTCGSAHTLAL 4600
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D+ACG H A++ +G +++WG G G+LG+ + T ++P+ + A
Sbjct: 3225 PRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNST--QLKPKLVAA 3282
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G V+Q++ G + A T+DG +++WG + G++G G PH E
Sbjct: 3283 LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG--SDTPH-----EIE 3335
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I V+ + CG++ +LAL +W G +Y +L G
Sbjct: 3336 RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3375
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ + + V +A G HCLALT EG V++WG G G+LG+ G + + P+
Sbjct: 4311 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH---GNRMSYDRPK 4367
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L+G+ V I+ G HSAA T G + WG G++G D + P +
Sbjct: 4368 LVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL--RPQLVEALL 4425
Query: 136 DFDSQNIKVVDVACGSRHTLALC--DDNSLWGCGWNEYNQLSMG 177
+ + +D+ACGS LC DD+++W G +Y +L G
Sbjct: 4426 GY-----RAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRG 4464
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P ++ VV +A G H LALT +G VFSWG G G+LG+ + T +PR
Sbjct: 3170 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLD--KPRL 3227
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPM 131
+ L + ++ G HSAA + G LY WG G++G + K LV
Sbjct: 3228 VETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKPKLVA------ 3281
Query: 132 SWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+V+ VACGSR TLAL +D +++ G ++ +L G
Sbjct: 3282 ------ALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3323
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 95/239 (39%), Gaps = 63/239 (26%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS---------- 66
+ P ++H + V DIACG H A+T G V +WG G G+LG+ S
Sbjct: 4363 YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVE 4422
Query: 67 ------------------------------------------GTDANMEPREIRALSGLG 84
G+D P +I +L+GLG
Sbjct: 4423 ALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 4482
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+++ G S A T+ G +Y WG + ++G G +D H P + Q K+
Sbjct: 4483 VIKVECGSQFSVALTKSGAVYTWGKGDFHRLG-HGSVD---HVRRPKKVAA---LQGKKI 4535
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
+ +A GS H +A D ++ G N+ QL G V+ + R + ++ IVK+
Sbjct: 4536 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGT----VTAIQRPRLVAALQGKHIVKV 4590
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V I CG LALT+ G V++WG G +LG+ G +P+ I
Sbjct: 3331 PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH--GGDQHVRKPQPIAG 3388
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWS 134
L G V+ ++ G H A T G +YAWG N+ GQ G V K LV+
Sbjct: 3389 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI--------- 3439
Query: 135 EDFDSQNIKVVDVACGSRHTLA 156
D+ + V VACGS H++A
Sbjct: 3440 -GLDA--VFVNRVACGSSHSIA 3458
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 13/154 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGV--VQISA 90
IA G + Q G V++ G G+ G+LG G N+ P ++ L V V + +
Sbjct: 3133 IAGGSKSLFIVGQNGKVYACGEGTNGRLGL---GVTHNVPLPHQLPVLHQYVVKKVAVHS 3189
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A T DG +++WG G++G + L P E S+ I+ DVACG
Sbjct: 3190 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL--DKPR---LVETLRSKKIR--DVACG 3242
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S H+ A+ L+ G EY +L G +Q+
Sbjct: 3243 SSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLK 3276
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 21/179 (11%)
Query: 19 MPSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ + + + D+A G H L LT EG V++WG+ G+LG + + +M P
Sbjct: 713 LPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLG--NGNLNGSMSPVL 770
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN--GGQVGVEGKLDLVVHDPHPMSWS 134
+ +L V ++ AG S A T DG LY+WG + G Q LV S
Sbjct: 771 VESLPK--VQRVFAGAQFSMALTTDGQLYSWGKASCLGHQ--------LVERSAQWCSVP 820
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
Q+ ++VDVA G H LAL ++G G N+ Q+ S VS L VP
Sbjct: 821 RLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQIC----PSSVSSEPLLRVP 875
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+++ LD V + CG + A+T G +++WG G+ +LG+ +S D P +
Sbjct: 662 VPTKIT-LLDRCVKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNS--DDQPLPTVVM 718
Query: 79 ALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSW 133
AL+ ++ ++ +G HS T +G +YAWG + G++G + G + V+ + P
Sbjct: 719 ALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLP--- 775
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
KV V G++ ++AL D L+ G
Sbjct: 776 ---------KVQRVFAGAQFSMALTTDGQLYSWG 800
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 20/165 (12%)
Query: 20 PSRMDHFLDLVVTDIA--CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ + IA C H +A+ +SWGNG +LG+ T A P +I
Sbjct: 609 PQLLEEIAHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGH--GDTHARAVPTKI 666
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP---MSWS 134
L V + G +SAA T G LY WG ++G G D P P M+ +
Sbjct: 667 TLLDRC-VKAVFCGCSYSAAITCSGNLYTWGRGTYARLG-HGNSD---DQPLPTVVMALT 721
Query: 135 EDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
E +++DVA GS H+L L + ++ G +Y +L G
Sbjct: 722 EH------EIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNG 760
>gi|74201803|dbj|BAE28504.1| unnamed protein product [Mus musculus]
Length = 681
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 33 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 90
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 91 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 144
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 145 -LQGKKVNRVACGSAHTLA 162
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++ G S A T
Sbjct: 3 QTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 60
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
+ G +Y WG + ++G G D H + Q KV+ +A GS H + +
Sbjct: 61 KSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE 113
Query: 160 DNSLWGCGWNEYNQLSMG 177
D ++ G N+ QL G
Sbjct: 114 DGEVYTWGDNDEGQLGDG 131
>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
Length = 355
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + +ACG H LALT +G VF+WGN G +G GT A P+EI
Sbjct: 144 IPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGCVGVSDRGTCA---PQEIE 200
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+L G ++ ISAG SAA + + +Y WG +N GQ+G+ G+ + P +
Sbjct: 201 SLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGL-GQGARYISQPTRIR-----T 254
Query: 139 SQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
+N+ +V +ACG H LAL + WG G
Sbjct: 255 LRNVPIVQIACGQYHMLALSAAGEVYAWGQG 285
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 24 DHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
D F L V + + H A+T++G V++WG G+ G+LG+ T P ++ L G+
Sbjct: 98 DAFDGLSVVNCSICDGHMAAVTEDGSVWTWGRGTFGRLGHEVHETGI---PEKVPGLDGM 154
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
V+++ G H+ A T DG ++AWG N G VGV + + + + K
Sbjct: 155 RFVKVACGHVHTLALTDDGRVFAWGNNKTGCVGVSDRGTCAPQEIESL--------RGKK 206
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
++D++ G + AL ++ ++ G + Y QL +G G +S TR+ ++N PIV++
Sbjct: 207 IIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQGARYISQPTRIRT---LRNVPIVQI 263
Query: 204 FAEHWNSARLSV 215
++ LS
Sbjct: 264 ACGQYHMLALSA 275
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G + AL+ E V++WG + GQLG G +P IR
Sbjct: 196 PQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGL-GQGARYISQPTRIRT 254
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L + +VQI+ G +H A + G +YAWG GQ E K+D + PH + +
Sbjct: 255 LRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEKKVDTNI--PHVI---DALKE 309
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
+K+ +A G H+ + D L+ G E
Sbjct: 310 SRVKM--IAAGGSHSAVVDDKGRLFTVGEEE 338
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR-ALSGLGVVQISAGGWHSAARTQDGF 103
Q G+++++G G QLG+ +G +N + PRE+ A GL VV S H AA T+DG
Sbjct: 64 QGGVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGS 123
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVACGSRHTLALCDDNS 162
++ WG G++G H+ H E ++ V VACG HTLAL DD
Sbjct: 124 VWTWGRGTFGRLG---------HEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGR 174
Query: 163 LWGCGWNEYNQLSMGC-GVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEH 218
++ G N+ GC GVS + E ++ I+ + A +SA LS EH
Sbjct: 175 VFAWGNNK-----TGCVGVSDRGTCAPQEI-ESLRGKKIIDISAGMESSAALSA-EH 224
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG LALT++G VFSWG+G G+LG G++ + P EI LSG+GVVQI
Sbjct: 2834 VVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVVQI 2891
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D V P P+ + +V+ VA
Sbjct: 2892 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIG-----GLRGRRVIHVA 2944
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H LA+ D ++ G N++ Q G
Sbjct: 2945 VGALHCLAVTDAGQVYAWGDNDHGQQGSG 2973
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ D+ACG H A++ +G +++WG G G+LG+ + T ++P+ + AL+G VVQ++
Sbjct: 2782 IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTT--QLKPKLVTALAGRRVVQVAC 2839
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T+DG +++WG + G++G G PH E I VV +
Sbjct: 2840 GSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG--SDTPH-----EIERLSGIGVVQIE 2892
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG++ +LAL +W G +Y +L G
Sbjct: 2893 CGAQFSLALTRAGEVWTWGKGDYYRLGHG 2921
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P ++ VV +A G H LALT +G VFSWG G G+LG+ G ++ PR
Sbjct: 2716 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH---GNRTTLDKPR 2772
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ AL + ++ G HSAA + G LY WG G++G H +
Sbjct: 2773 LVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG---------HGDNTTQLKP 2823
Query: 136 DFDS--QNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+ +VV VACGSR TLAL +D +++ G ++ +L G
Sbjct: 2824 KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 2869
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V I CG LALT+ G V++WG G +LG+ G +P+ I
Sbjct: 2877 PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH--GGDQHVRKPQPIGG 2934
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWS 134
L G V+ ++ G H A T G +YAWG N+ GQ G V K LV+
Sbjct: 2935 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI--------- 2985
Query: 135 EDFDSQNIKVVDVACGSRHTLA 156
D+ + V VACGS H++A
Sbjct: 2986 -GLDA--VFVNRVACGSSHSIA 3004
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ + D +V D+A G H LALT EG+VF+WG+G G+LG + + +++P
Sbjct: 364 LPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG--NGNCNGSLQPIL 421
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN--GGQVGVEGKLDLVVHDPHPMSWS 134
+ +L V ++ AG S A + +G LY WG G Q LV S
Sbjct: 422 VESLPR--VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQ--------LVERSVQGCSVP 471
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
S Q+ ++VDVA H LAL ++G G N+ Q+
Sbjct: 472 RLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 512
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGV--VQISA 90
IA G ++Q+G V++ G G+ G+LG G N+ P ++ L V V + +
Sbjct: 2679 IAGGSKSLFIVSQDGKVYACGEGTNGRLGL---GVTHNVPLPHQLPVLHQYVVKKVAVHS 2735
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A T DG +++WG G++G + L P E ++ I+ DVACG
Sbjct: 2736 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL--DKPR---LVEALRAKKIR--DVACG 2788
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
S H+ A+ L+ G EY +L G +Q+
Sbjct: 2789 SSHSAAISSQGELYTWGLGEYGRLGHGDNTTQL 2821
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+++ V + CG + A+T G + +WG G+ +LG+ +S D P +
Sbjct: 312 VPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNS--DDRSLPTLVV 369
Query: 79 ALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSW 133
ALS VV ++ +G HS A T +G ++AWG + G++G G L ++ + P
Sbjct: 370 ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--- 426
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
+V V GS+ ++AL + L+
Sbjct: 427 ---------RVQRVFAGSQFSVALSSEGQLY 448
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 20 PSRMDHFLDLVVTDIA--CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P M+ V IA C H LA+ +SWG G +LG+ T A P +I
Sbjct: 259 PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGH--GDTHARAVPTKI 316
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL V + G +SAA T G L WG ++G G D ++ S+
Sbjct: 317 AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLG-HGNSDDRSLPTLVVALSDHM 375
Query: 138 DSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
VVDVA GS H+LAL + ++ G +Y +L G
Sbjct: 376 ------VVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 411
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG LALT++G VFSWG+G G+LG G++ + P EI LSG+GV+QI
Sbjct: 3254 VIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG--RGGSEGSSTPHEIERLSGIGVIQI 3311
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D V P P++ + +V+ VA
Sbjct: 3312 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIA-----GLRGHRVIHVA 3364
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H LA+ D ++ G N++ Q G
Sbjct: 3365 VGALHCLAVTDAGQVYAWGDNDHGQQGSG 3393
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H A++ +G +++WG G G+LG+ + T ++P+ + ALSG V+Q++
Sbjct: 3202 IRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNAT--QLKPKLVAALSGRRVIQVAC 3259
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T+DG +++WG + G++G G PH E I V+ +
Sbjct: 3260 GSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG--SSTPH-----EIERLSGIGVIQIE 3312
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG++ +LAL +W G +Y +L G
Sbjct: 3313 CGAQFSLALTRAGEVWTWGKGDYYRLGHG 3341
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P ++ VV +A G H LALT +G VFSWG G G+LG+ + T +PR
Sbjct: 3136 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLD--KPRL 3193
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL + I+ G HSAA + G LY WG G++G H +
Sbjct: 3194 VEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLG---------HGDNATQLKPK 3244
Query: 137 FDS--QNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+ +V+ VACGSR TLAL +D +++ G ++ +L G
Sbjct: 3245 LVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3289
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ + + V +A G HCLALT +G V++WG G G+LG+ G + + P+
Sbjct: 4289 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH---GNRMSYDRPK 4345
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L+G+ V I+ G HSAA T G + WG G++G D + P +
Sbjct: 4346 LVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALL 4403
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + +D+ACGS TL + DD+++W G +Y +L G
Sbjct: 4404 GY-----RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4442
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L V + CG +ALT+ G V++WG G +LG+ S + P+++
Sbjct: 4449 LPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS--VEHVRRPKKVA 4506
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G ++ WG N+ GQ+G +G + + P ++
Sbjct: 4507 ALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLG-DGTVT-AIQRPRLVA-----A 4559
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 4560 LQGKHIVKVTCGSAHTLAL 4578
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++H + V DIACG H A+T G V +WG G G+LG+ S + + P+
Sbjct: 4341 YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS--EDQLRPKL 4398
Query: 77 IRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ AL G + I+ +G + T D +++WG + G++G G D + +
Sbjct: 4399 VEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS------DGCKLPYK 4452
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + V+ V CGS+ ++AL +++ G ++++L G
Sbjct: 4453 IE-SLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4494
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V I CG LALT+ G V++WG G +LG+ G +P+ I
Sbjct: 3297 PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH--GGDQHVRKPQPIAG 3354
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWS 134
L G V+ ++ G H A T G +YAWG N+ GQ G V K LV+
Sbjct: 3355 LRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI--------- 3405
Query: 135 EDFDSQNIKVVDVACGSRHTLA 156
D+ + V VACGS H++A
Sbjct: 3406 -GLDA--VIVNRVACGSSHSMA 3424
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ + D V D+A G H L LT EG+VF+WG+G G+LG + ++++ P+
Sbjct: 739 LPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLG--NGSCNSSLLPQL 796
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN--GGQVGVEGKLDLVVHDPHPMSWS 134
I L V ++ AG S A + +G LY+WG + G Q LV + S
Sbjct: 797 IDCLPR--VQRVFAGAQFSLALSCEGQLYSWGKASCLGHQ--------LVERNVQGCSVP 846
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
Q+ ++VDVA G H LAL ++G G N+ Q+
Sbjct: 847 RLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQI 887
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGV--VQISA 90
IA G ++Q+G V++ G G+ G+LG G N+ P ++ L V V + +
Sbjct: 3099 IAGGSKSLFVVSQDGKVYACGEGTNGRLGL---GVTHNVPLPHQLPVLHQYVVKKVAVHS 3155
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A T DG +++WG G++G + L P E ++ I+ D+ACG
Sbjct: 3156 GGKHALALTLDGKVFSWGEGEDGKLGHGNRSTL--DKPR---LVEALRAKKIR--DIACG 3208
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S H+ A+ L+ G EY +L G +Q+
Sbjct: 3209 SSHSAAISSQGELYTWGLGEYGRLGHGDNATQLK 3242
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P++++ + LV + + CG + A+T G +++WG G+ G+LG+ +S D P +
Sbjct: 687 ELPTKIESLVRLVKS-VYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTS--DDQCLPAMV 743
Query: 78 RALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVG 116
AL VV ++ +G H+ T +G ++AWG + G++G
Sbjct: 744 MALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLG 784
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 36 CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHS 95
C H LA+ +SWG G +LG+ A P +I +L L V + G +S
Sbjct: 653 CEGRHFLAVDSNFNAYSWGVGDSRRLGH--GDCHARELPTKIESLVRL-VKSVYCGCSYS 709
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T G LY WG G++G G D M+ + +VVDVA GS H
Sbjct: 710 AAITLGGNLYTWGRGTYGRLG-HGTSDDQCLPAMVMALKDH------QVVDVALGSGDAH 762
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TL L + ++ G +Y +L G
Sbjct: 763 TLCLTSEGLVFAWGDGDYGKLGNG 786
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 11/169 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ RGQLG P E ALS L VQ++ G A T DG L+A G+
Sbjct: 4216 IYGWGHNHRGQLGGLEGSRIKTPTPCE--ALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4273
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
+GG++GV G + + +K V V G +H LAL D ++ G
Sbjct: 4274 GSGGRLGVGGSDSWAIP-----TLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEG 4328
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEH 218
E +L G +S R + EH+ + + +SA ++ H
Sbjct: 4329 EDGKLGHGNRMS----YDRPKLVEHLNGMSVADIACGSAHSAAITASGH 4373
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG LALT++G VFSWG+G G+LG G++ + P EI LSG+GVVQI
Sbjct: 925 VVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVVQI 982
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D V P P+ + +V+ VA
Sbjct: 983 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIG-----GLRGRRVIHVA 1035
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H LA+ D ++ G N++ Q G
Sbjct: 1036 VGALHCLAVTDAGQVYAWGDNDHGQQGSG 1064
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L V + CG +ALT+ G V++WG G +LG+ S D P+++
Sbjct: 2032 LPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS--VDHVRRPKKVA 2089
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G +Y WG N+ GQ+G +G + + P ++
Sbjct: 2090 ALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTVT-AIQRPRLVA-----A 2142
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 2143 LQGKHIVKVTCGSAHTLAL 2161
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D+ACG H A++ +G +++WG G G+LG+ + T ++P+ + A
Sbjct: 862 PRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNAT--QLKPKLVTA 919
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G VVQ++ G + A T+DG +++WG + G++G G PH E
Sbjct: 920 LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG--SDTPH-----EIE 972
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I VV + CG++ +LAL +W G +Y +L G
Sbjct: 973 RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 1012
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ + + V +A G HCLALT EG V++WG G G+LG+ G + + P+
Sbjct: 1872 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH---GNRMSYDRPK 1928
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L+G+ V I+ G HSAA T G + WG G++G D + P +
Sbjct: 1929 LVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALL 1986
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + +D+ACGS TL + DD+++W G +Y +L G
Sbjct: 1987 GY-----RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 2025
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P ++ VV +A G H LALT +G VFSWG G G+LG+ + T +PR
Sbjct: 807 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLD--KPRL 864
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL + ++ G HSAA + G LY WG G++G H +
Sbjct: 865 VEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG---------HGDNATQLKPK 915
Query: 137 FDS--QNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+ +VV VACGSR TLAL +D +++ G ++ +L G
Sbjct: 916 LVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 960
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 95/239 (39%), Gaps = 63/239 (26%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS---------- 66
+ P ++H + V DIACG H A+T G V +WG G G+LG+ S
Sbjct: 1924 YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 1983
Query: 67 ------------------------------------------GTDANMEPREIRALSGLG 84
G+D P +I +L+GLG
Sbjct: 1984 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 2043
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV++ G S A T+ G +Y WG + ++G G +D H P + Q K+
Sbjct: 2044 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLG-HGSVD---HVRRPKKVAA---LQGKKI 2096
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
+ +A GS H +A D ++ G N+ QL G V+ + R + ++ IVK+
Sbjct: 2097 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGT----VTAIQRPRLVAALQGKHIVKV 2151
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V I CG LALT+ G V++WG G +LG+ G +P+ I
Sbjct: 968 PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH--GGDQHVRKPQPIGG 1025
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWS 134
L G V+ ++ G H A T G +YAWG N+ GQ G V K LV+
Sbjct: 1026 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI--------- 1076
Query: 135 EDFDSQNIKVVDVACGSRHTLA 156
D+ + V VACGS H++A
Sbjct: 1077 -GLDA--VFVNRVACGSSHSIA 1095
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGV--VQISA 90
IA G ++Q+G V++ G G+ G+LG G N+ P ++ L V V + +
Sbjct: 770 IAGGSKSLFIVSQDGKVYACGEGTNGRLGL---GVTHNVPLPHQLPVLHQYVVKKVAVHS 826
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A T DG +++WG G++G + L P + E ++ I+ DVACG
Sbjct: 827 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL--DKPRLV---EALRAKKIR--DVACG 879
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S H+ A+ L+ G EY +L G +Q+
Sbjct: 880 SSHSAAISSQGELYTWGLGEYGRLGHGDNATQLK 913
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 11/169 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ RGQLG P E ALS L VQ++ G A T DG L+A G+
Sbjct: 1799 IYGWGHNHRGQLGGLEGSRIKTPTPCE--ALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 1856
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
+GG++GV G + + +K V V G +H LAL + ++ G
Sbjct: 1857 GSGGRLGVGGSDSWAIP-----TLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEG 1911
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEH 218
E +L G +S R + EH+ + + +SA ++ H
Sbjct: 1912 EDGKLGHGNRMS----YDRPKLVEHLNGMSVADIACGSAHSAAITASGH 1956
>gi|358335048|dbj|GAA31002.2| E3 ubiquitin-protein ligase HERC4 [Clonorchis sinensis]
Length = 1185
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 2 CDHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQL 61
CD GP + SQ P + + +ACG+ H L L +G V+S G GQL
Sbjct: 15 CDDNQLGPHEQDSQQISSPQPITVPNPWTIAHVACGYKHTLFLNADGEVYSCGGNEFGQL 74
Query: 62 GYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G S +D R I AL + I+ G +H+AA + G L+ WG N+ GQ+G EG
Sbjct: 75 GRSDSPSDF----RRITALENHTITDIACGAYHNAAISYTGRLFTWGCNSNGQLGREG-- 128
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D + +VV V+ G H+L L D + L+ G N + QL +G
Sbjct: 129 -----DDSSVKMIRSLAEH--RVVQVSLGLEHSLVLTDTSRLFVFGSNIWGQLGLG 177
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 10/179 (5%)
Query: 22 RMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS 81
R+ + +TDIACG H A++ G +F+WG S GQLG G D+++ + IR+L+
Sbjct: 85 RITALENHTITDIACGAYHNAAISYTGRLFTWGCNSNGQLG--REGDDSSV--KMIRSLA 140
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
VVQ+S G HS T L+ +G N GQ+G+ + DL + P +
Sbjct: 141 EHRVVQVSLGLEHSLVLTDTSRLFVFGSNIWGQLGLGFRSDLPIVIPQQLMC-----LAG 195
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPI 200
+ + ++ G H+ L +L+ G N+Y QL + + V+ T ++N P+
Sbjct: 196 LPIRCISAGGVHSAVLTISGTLYVWGGNKYGQLGLE-PIETVAAETVSGSRSSIENAPV 253
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 47/207 (22%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ G +H L LT +F +G+ GQLG + P+++ L+GL + ISA
Sbjct: 144 VVQVSLGLEHSLVLTDTSRLFVFGSNIWGQLGLGFRSDLPIVIPQQLMCLAGLPIRCISA 203
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVG---------------------------------- 116
GG HSA T G LY WG N GQ+G
Sbjct: 204 GGVHSAVLTISGTLYVWGGNKYGQLGLEPIETVAAETVSGSRSSIENAPVWCGNKYGQLG 263
Query: 117 -----------VEGKLDLVVHDP-HPMSWSEDFDS-QNIKVVDVACGSRHTLALCDDNSL 163
V G + + P H +S S + + V V CG HT+ L ++ +
Sbjct: 264 LEPIETVAAETVSGSRSSIENAPQHSVSVPTAVRSLKGQRAVFVDCGESHTVVLTEEGGV 323
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRLS 190
+ G N++ QL G VS+ +++
Sbjct: 324 FTYGGNQFGQLGHGESSKSVSIPRKVA 350
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ CG H + LT+EG VF++G GQLG+ S ++ PR++ L Q++ G
Sbjct: 307 VDCGESHTVVLTEEGGVFTYGGNQFGQLGHGESSKSVSI-PRKVADLMDNPTTQVACGRM 365
Query: 94 HSAARTQD-GFLYAWGWNNGGQVGVEGKLD 122
H+ G +YA+G + GQ+G D
Sbjct: 366 HTLVLVPSLGCVYAFGAGSEGQLGTNTNTD 395
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 11/123 (8%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
I+F WG QLG + P+ I + + ++ G H+ DG +Y+ G
Sbjct: 8 ILFGWGACDDNQLGPHEQDSQQISSPQPITVPNPWTIAHVACGYKHTLFLNADGEVYSCG 67
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGC 166
N GQ+G P + +N + D+ACG+ H A+ L WGC
Sbjct: 68 GNEFGQLG---------RSDSPSDFRRITALENHTITDIACGAYHNAAISYTGRLFTWGC 118
Query: 167 GWN 169
N
Sbjct: 119 NSN 121
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
L+ WG + Q+G + + P P++ + + VACG +HTL L D
Sbjct: 8 ILFGWGACDDNQLGPHEQDSQQISSPQPITVPNPW-----TIAHVACGYKHTLFLNADGE 62
Query: 163 LWGCGWNEYNQLSMGCGVSQVSVMTRL 189
++ CG NE+ QL S +T L
Sbjct: 63 VYSCGGNEFGQLGRSDSPSDFRRITAL 89
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P +R+L G V + G H+ T++G ++ +G N GQ+G G+ V P ++
Sbjct: 293 PTAVRSLKGQRAVFVDCGESHTVVLTEEGGVFTYGGNQFGQLG-HGESSKSVSIPRKVA- 350
Query: 134 SEDFDSQNIKVVDVACGSRHTLAL 157
D + VACG HTL L
Sbjct: 351 ----DLMDNPTTQVACGRMHTLVL 370
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQE-GIVFSWGNGSRGQLGYPSSGTDANM 72
S+ +P ++ +D T +ACG H L L G V+++G GS GQLG ++ TD++
Sbjct: 340 SKSVSIPRKVADLMDNPTTQVACGRMHTLVLVPSLGCVYAFGAGSEGQLGT-NTNTDSSR 398
Query: 73 E-----PREIRALSG----------LGVVQISAGGWHSAARTQ 100
P R S L V ++ AGG H+ A T+
Sbjct: 399 PTLVKGPWLTRGFSSNQSTNSPDVPLEVARLYAGGDHAYALTR 441
>gi|408501212|ref|YP_006865131.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
gi|408466036|gb|AFU71565.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
Length = 1186
Score = 80.9 bits (198), Expect = 5e-13, Method: Composition-based stats.
Identities = 59/181 (32%), Positives = 85/181 (46%), Gaps = 30/181 (16%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY---------------PSSGTDANM 72
D ++ G+ H LA+ +G ++WG GQLG PSS TD N
Sbjct: 732 DFTYVQVSGGYYHSLAIGSDGYAYAWGRSDSGQLGNNTTTAYSTVPVRVRDPSSPTDKN- 790
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
GL +Q+SAGG HS A DG YAWG N GQ+G +G P+
Sbjct: 791 --------KGLKAIQVSAGGDHSLAVGSDGNAYAWGSNGSGQLG-DGTY---TTRTTPVK 838
Query: 133 WSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
S+ D+ N V V+ G +LA+ D + +GCG N Y +L G S+ +++ ++S
Sbjct: 839 VSKPADAPTNFTYVQVSGGYNDSLAIDSDGNAYGCGDNTYGKLGDGTSTSR-AMLVKVSK 897
Query: 192 P 192
P
Sbjct: 898 P 898
Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats.
Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALS----- 81
D + I+ G H LA+ +G ++WG GQLG +SG A+ P +R S
Sbjct: 904 DFIYMQISAGAGHSLAVGSDGYAYAWGRSDSGQLGNNTSGFGAHSSVPVRVRDPSSPTDE 963
Query: 82 --GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-------VEGKLDLVVHDPHPMS 132
GL Q+S GG HS A DG++YAWG NN GQ+G + + V DP +
Sbjct: 964 NKGLKATQVSGGGDHSLAVGSDGYVYAWGINNYGQLGNNTTSGSTANPVPVHVRDP---A 1020
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
S D S+ ++ V G +LA+ D + + G N QL
Sbjct: 1021 NSAD-TSKGLQATQVKVGYDFSLAMGSDGNAYAWGANGNGQL 1061
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 15/145 (10%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP----REIRALSGLGVVQISAGGWHSAA 97
LA+ +G ++WG GQLG T P + + A + VQ+S G +HS A
Sbjct: 690 LAVGSDGNAYAWGYNRYGQLG--DGTTTTRTTPVKVSKPVGAPTDFTYVQVSGGYYHSLA 747
Query: 98 RTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
DG+ YAWG ++ GQ+G + + V DP S ++ +K + V+ G
Sbjct: 748 IGSDGYAYAWGRSDSGQLGNNTTTAYSTVPVRVRDPS----SPTDKNKGLKAIQVSAGGD 803
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H+LA+ D + + G N QL G
Sbjct: 804 HSLAVGSDGNAYAWGSNGSGQLGDG 828
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-YPSSGTDANMEPREIR-------AL 80
L T ++ G DH LA+ +G V++WG + GQLG +SG+ AN P +R
Sbjct: 967 LKATQVSGGGDHSLAVGSDGYVYAWGINNYGQLGNNTTSGSTANPVPVHVRDPANSADTS 1026
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
GL Q+ G S A DG YAWG N GQ+G
Sbjct: 1027 KGLQATQVKVGYDFSLAMGSDGNAYAWGANGNGQLG 1062
>gi|298709051|emb|CBJ31000.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 529
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 94/224 (41%), Gaps = 26/224 (11%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-------PSSGTDANMEPREIRA- 79
+L+ + CG H ALT EG+V+ WG GQLG SSG PR +R
Sbjct: 202 ELLAKTVVCGGMHTAALTAEGVVYCWGRADSGQLGIGAAWVHETSSGVMGVEWPRRVRGL 261
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK--LDLVVHDPHPMSWSEDF 137
L G I+ GG+H+AA T DG Y WG + G +G L + PH ++ +
Sbjct: 262 LEGRRTESIACGGFHTAAVTTDGECYTWGKEDFGMLGCSNAALLKGGLFQPHRVTLQDMT 321
Query: 138 DSQNI-----------KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
D + K VACG HT + + +W CG EY +L +G SQ +
Sbjct: 322 DVSHAEQGNGSGGGKQKAKAVACGGWHTAVVGEKGGVWMCGRGEYGRLGLGDQKSQWHL- 380
Query: 187 TRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAG 230
P ++ PI SA +VP K V F G
Sbjct: 381 ----TPAPLERGPIPAPVPPSPRSAASAVPASDKPGGAVHGFGG 420
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRAL------S 81
L V ++CG H LA + G +SWG G+ GQLG+ G D ++ PR I AL +
Sbjct: 52 LAVLQVSCGSRHTLATVEGGEAYSWGWGACGQLGH---GDDHSVGCPRVIEALKTGEGDA 108
Query: 82 GLGVVQ-ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
LG V +SAGG HSAA + G ++ WG ++ GQ+G+ + P P
Sbjct: 109 ALGPVSWVSAGGIHSAAVLEGGRVFTWGGSSYGQLGLGPAVTTQGMQPLP 158
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 74/189 (39%), Gaps = 49/189 (25%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL-----SGLGVVQI 88
++ G H A+ + G VF+WG S GQLG + T M+P + + S LG ++
Sbjct: 116 VSAGGIHSAAVLEGGRVFTWGGSSYGQLGLGPAVTTQGMQPLPGKVMLSETESPLGSPRV 175
Query: 89 SA---------------------------------GGWHSAARTQDGFLYAWGWNNGGQV 115
SA GG H+AA T +G +Y WG + GQ+
Sbjct: 176 SATGLTRHSSMTQKAAVLAMETAPKTELLAKTVVCGGMHTAALTAEGVVYCWGRADSGQL 235
Query: 116 GVEGKLDLVVHDPHP----MSWSEDFDS--QNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
G+ VH+ + W + + +ACG HT A+ D + G
Sbjct: 236 GIGAAW---VHETSSGVMGVEWPRRVRGLLEGRRTESIACGGFHTAAVTTDGECYTWGKE 292
Query: 170 EYNQLSMGC 178
++ L GC
Sbjct: 293 DFGML--GC 299
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW--SE 135
RALSGL V+Q+S G H+ A + G Y+WGW GQ+G G D V P + +
Sbjct: 47 RALSGLAVLQVSCGSRHTLATVEGGEAYSWGWGACGQLG-HGD-DHSVGCPRVIEALKTG 104
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
+ D+ V V+ G H+ A+ + ++ G + Y QL +G V+
Sbjct: 105 EGDAALGPVSWVSAGGIHSAAVLEGGRVFTWGGSSYGQLGLGPAVT 150
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG LALT++G VFSWG+G G+LG G++ + P EI LSG+GVVQI
Sbjct: 3176 VVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVVQI 3233
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D V P P+ + +V+ VA
Sbjct: 3234 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIG-----GLRGRRVIHVA 3286
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H LA+ D ++ G N++ Q G
Sbjct: 3287 VGALHCLAVTDAGQVYAWGDNDHGQQGSG 3315
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L V + CG +ALT+ G V++WG G +LG+ S D P+++
Sbjct: 4280 LPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS--VDHVRRPKKVA 4337
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G +Y WG N+ GQ+G +G + + P ++
Sbjct: 4338 ALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTVT-AIQRPRLVA-----A 4390
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 4391 LQGKHIVKVTCGSAHTLAL 4409
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 82/168 (48%), Gaps = 23/168 (13%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P ++ VV +A G H LALT +G VFSWG G G+LG+ + T +PR
Sbjct: 3058 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLD--KPRL 3115
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPM 131
+ AL + ++ G HSAA + G LY WG G++G + K LVV
Sbjct: 3116 VEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVV------ 3169
Query: 132 SWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+VV VACGSR TLAL +D +++ G ++ +L G
Sbjct: 3170 ------ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3211
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ + + V +A G HCLALT EG V++WG G G+LG+ G + + P+
Sbjct: 4120 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH---GNRMSYDRPK 4176
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L+G+ V I+ G HSAA T G + WG G++G D + P +
Sbjct: 4177 LVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALL 4234
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + +D+ACGS TL + DD+++W G +Y +L G
Sbjct: 4235 GY-----RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4273
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ D+ACG H A++ +G +++WG G G+LG+ + T ++P+ + AL+G VVQ++
Sbjct: 3124 IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVT--QLKPKLVVALAGRRVVQVAC 3181
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T+DG +++WG + G++G G PH E I VV +
Sbjct: 3182 GSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG--SDTPH-----EIERLSGIGVVQIE 3234
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG++ +LAL +W G +Y +L G
Sbjct: 3235 CGAQFSLALTRAGEVWTWGKGDYYRLGHG 3263
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 95/239 (39%), Gaps = 63/239 (26%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS---------- 66
+ P ++H + V DIACG H A+T G V +WG G G+LG+ S
Sbjct: 4172 YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 4231
Query: 67 ------------------------------------------GTDANMEPREIRALSGLG 84
G+D P +I +L+GLG
Sbjct: 4232 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 4291
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV++ G S A T+ G +Y WG + ++G G +D H P + Q K+
Sbjct: 4292 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLG-HGSVD---HVRRPKKVAA---LQGKKI 4344
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
+ +A GS H +A D ++ G N+ QL G V+ + R + ++ IVK+
Sbjct: 4345 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGT----VTAIQRPRLVAALQGKHIVKV 4399
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V I CG LALT+ G V++WG G +LG+ G +P+ I
Sbjct: 3219 PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH--GGDQHVRKPQPIGG 3276
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWS 134
L G V+ ++ G H A T G +YAWG N+ GQ G V K LV+
Sbjct: 3277 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI--------- 3327
Query: 135 EDFDSQNIKVVDVACGSRHTLA 156
D+ + V VACGS H++A
Sbjct: 3328 -GLDA--VFVNRVACGSSHSIA 3346
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ + D +V D+A G H LALT EG+VF+WG+G G+LG + + +++P
Sbjct: 707 LPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG--NGNCNGSLQPIL 764
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN--GGQVGVEGKLDLVVHDPHPMSWS 134
+ +L V ++ AG S A + +G LY+WG G Q LV S
Sbjct: 765 VESLPR--VQRVFAGSQFSLALSSEGQLYSWGKATCLGHQ--------LVERSVQGCSVP 814
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
S Q+ ++VDVA H LAL ++G G N+ Q+
Sbjct: 815 RLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 855
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGV--VQISA 90
IA G ++Q+G V++ G G+ G+LG G N+ P ++ L V V + +
Sbjct: 3021 IAGGSKSLFIVSQDGKVYACGEGTNGRLGL---GVTHNVPLPHQLPVLHQYVVKKVAVHS 3077
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A T DG +++WG G++G + L P E ++ I+ DVACG
Sbjct: 3078 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL--DKPR---LVEALRAKKIR--DVACG 3130
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S H+ A+ L+ G EY +L G V+Q+
Sbjct: 3131 SSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLK 3164
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+++ V + CG + A+T G + +WG G+ +LG+ +S D P +
Sbjct: 655 VPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNS--DDRSLPTLVV 712
Query: 79 ALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSW 133
ALS VV ++ +G HS A T +G ++AWG + G++G G L ++ + P
Sbjct: 713 ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--- 769
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
+V V GS+ +LAL + L+ G
Sbjct: 770 ---------RVQRVFAGSQFSLALSSEGQLYSWG 794
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 20 PSRMDHFLDLVVTDIA--CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P M+ V IA C H LA+ +SWG G +LG+ T A P +I
Sbjct: 602 PLPMEEVAHEVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGH--GDTHARAVPTKI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL V + G +SAA T G L WG ++G G D ++ S+
Sbjct: 660 AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLG-HGNSDDRSLPTLVVALSDHM 718
Query: 138 DSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
VVDVA GS H+LAL + ++ G +Y +L G
Sbjct: 719 ------VVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 754
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 11/169 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ RGQLG P E ALS L VQ++ G A T DG L+A G+
Sbjct: 4047 IYGWGHNHRGQLGGLEGSRIKTPTPCE--ALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4104
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
+GG++GV G + + +K V V G +H LAL + ++ G
Sbjct: 4105 GSGGRLGVGGSDSWAIP-----TLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEG 4159
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEH 218
E +L G +S R + EH+ + + +SA ++ H
Sbjct: 4160 EDGKLGHGNRMS----YDRPKLVEHLNGMSVADIACGSAHSAAITASGH 4204
>gi|357460949|ref|XP_003600756.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489804|gb|AES71007.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 464
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IACG H +T G V ++G G GQ G S TD + P + +L G+ + ++A
Sbjct: 289 IKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGS--TDDELSPTCVSSLLGIQIEGVAA 346
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVAC 149
G WH+ + DG +YA+G N GQ+G D P + D S +N+ V ++C
Sbjct: 347 GLWHTVCTSADGDVYAFGGNQFGQLGTGS--DQAETLPRLL----DCPSLENVNVKTISC 400
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+RHT + D+ ++ GWN+Y QL +G
Sbjct: 401 GARHTALVTDNGKVFSWGWNKYGQLGLG 428
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 14/143 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPR--E 76
P+ + L + + +A G H + + +G V+++G GQLG +G+D A PR +
Sbjct: 330 PTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLG---TGSDQAETLPRLLD 386
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+L + V IS G H+A T +G +++WGWN GQ+G+ +D + +
Sbjct: 387 CPSLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNI--------PSE 438
Query: 137 FDSQNIKVVDVACGSRHTLALCD 159
+ +VACG HTL L +
Sbjct: 439 VAIEGCIAKNVACGWWHTLLLAE 461
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 15/110 (13%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM---------- 131
G+ + ++AGG H+ + G ++ WG+ GQ+G+ ++ +V PH +
Sbjct: 214 GVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMV-SSPHIIPCIDSSSLVQ 272
Query: 132 ----SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S +F + +ACG RH+ + D ++ GW Y Q G
Sbjct: 273 GSMSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQG 322
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 74/191 (38%), Gaps = 22/191 (11%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWG----NGSRG 59
++ SG + F +P+ ++ + A + HC+A T G V++WG S
Sbjct: 79 YVTSGKHGETPEPFSLPN------EVSIVKAASAWAHCVAATDCGEVYTWGWKECIPSGK 132
Query: 60 QLGYPSSGT----DANMEPREI--RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGG 113
G S G DA +P +S V S GG S+
Sbjct: 133 VFGETSQGVSPEKDAQGKPSSFLTEQVSSRSQVSKSTGGTVSSGEESSKRRKVSSAKQAA 192
Query: 114 QVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
Q G D++ P ++ + +K+ VA G RHTL L D +WG G+ Q
Sbjct: 193 QTSSSGD-DILTAMPCLVTLNP-----GVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQ 246
Query: 174 LSMGCGVSQVS 184
L +G V VS
Sbjct: 247 LGLGSRVRMVS 257
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 159 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPTPRRVTGCLQNKVVVTI 215
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 216 ACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 268
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 269 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 322
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC----GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+D L IAC H + T EG VF+WG+ + QLG + T+ + P
Sbjct: 94 PRRLD---SLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPC 148
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 149 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPTPRRVT 204
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 205 GCL--QNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLG 245
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 12/139 (8%)
Query: 20 PSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 200 PRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPT--PCRVA 257
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 258 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD-- 313
Query: 139 SQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 314 ----RIIEIAACHSTHTSA 328
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +LSG
Sbjct: 46 ELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGK 103
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 104 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 157
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q P V C
Sbjct: 158 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PTPRRVTGC 206
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 253 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 309
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 310 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 347
>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
Length = 418
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG H L LTQ G VF+ G GQLG SS T +EP E+ VV++SAG
Sbjct: 71 LACGGAHTLFLTQSGRVFATGLNDFGQLGVGSSVTH-TLEPVEVSGFHER-VVEVSAGNH 128
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A T DG L+ WG N+GGQ+G+ VV P + DF ++ VA GS H
Sbjct: 129 HSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDF-----RIKMVALGSEH 183
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG--CGVSQVSVMTRLSVPEHVKNCPIVKL 203
++A+ ++ + G +L G + S+ T P +KN +K+
Sbjct: 184 SIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTTSEYTPRLIKNFDGIKI 235
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS----- 65
K +V P+++D D + +A G +H +A+T+EG V SWG G+LG+
Sbjct: 154 KGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSIL 213
Query: 66 --SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
S T + PR I+ G+ + +I+AG HSA + G L+ +G G
Sbjct: 214 GFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKTEKGFGRS----- 268
Query: 124 VVHDPHPMSWSEDFDSQNIKVV----DVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+E F ++ + +VACG HT + D L+ G NE L +G
Sbjct: 269 ----------NEAFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLG 316
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 13/165 (7%)
Query: 8 GPLKMLSQVFHM--PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
G L + S V H P + F + VV +++ G H A+T +G +F WG S GQLG
Sbjct: 96 GQLGVGSSVTHTLEPVEVSGFHERVV-EVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGK 154
Query: 66 SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK----- 120
P ++ L+ + ++ G HS A T++G + +WG G++G G+
Sbjct: 155 GAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEEGEVLSWGAAGSGRLG-HGRQSSIL 213
Query: 121 -LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
L + P ++FD IK+ +A G H+ + + +L+
Sbjct: 214 GFSLTTSEYTP-RLIKNFD--GIKIKKIAAGMLHSACIDEKGTLF 255
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 23/140 (16%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAG 91
++ACG H +T G ++SWG+ G LG GTD P +++ L L V ++S G
Sbjct: 285 EVACGGYHTCVVTDSGDLYSWGSNENGCLGL--GGTDMVCSPEILKSSLFKLPVSKVSCG 342
Query: 92 GWHSAARTQDGFLYAWGW------------NNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
H+A + D +Y WGW ++GGQ+G +D +P + +
Sbjct: 343 WKHTAVISGDD-IYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYF--EPMMVPFG----- 394
Query: 140 QNIKVVDVACGSRHTLALCD 159
+N + V V+CG HT A+ +
Sbjct: 395 KNARAVHVSCGFNHTGAIYE 414
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 82/197 (41%), Gaps = 42/197 (21%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPR-------EIRALSGLGVVQISAGGWHSAARTQDGFLY 105
WGNG G+LG +E R A + ++ GG H+ TQ G ++
Sbjct: 35 WGNGDYGRLGL------GVLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQSGRVF 88
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
A G N+ GQ+GV V H P+ S + +VV+V+ G+ H+ A+ D L+
Sbjct: 89 ATGLNDFGQLGVGSS---VTHTLEPVEVSGFHE----RVVEVSAGNHHSCAVTADGKLFV 141
Query: 166 CGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-----NCPIVKLFAEH------------W 208
G N QL +G G +V +S P V +V L +EH W
Sbjct: 142 WGRNSGGQLGLGKGAGKV-----VSTPTKVDCLTDFRIKMVALGSEHSIAVTEEGEVLSW 196
Query: 209 NSARLSVPEHAKDSSIV 225
+A H + SSI+
Sbjct: 197 GAAGSGRLGHGRQSSIL 213
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
Length = 4706
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4058 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4115
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4116 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4169
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q K+ VACGS HTLA
Sbjct: 4170 -LQGKKINRVACGSAHTLA 4187
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 29 LVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D++CG LA+T+ G V+SWG+G G+LG G+D P+ I L L VV
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVV 661
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y+WG + ++G G + H +P Q KVVD
Sbjct: 662 KVRCGSQFSVALTKDGQVYSWGKGDNQRLG-HGTEE---HVRYPKLLE---GLQGKKVVD 714
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 715 VAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G VFSWG G G+LG+ T EP+ I ALSG VV I+ G +S
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGH--GDTVPLEEPKMISALSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DV+CGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDQTI----PMLVT---GLKGLKVIDVSCGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ + VV +A G H +ALT +G VFSWG G G+LG+ S
Sbjct: 3027 LGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRM 3086
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3087 NCD---KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG---------H 3134
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3135 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194
Query: 179 GVSQ 182
+ Q
Sbjct: 3195 NIPQ 3198
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2981 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3038
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3039 QITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3094
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
E ++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3095 -EALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLK 3142
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3200
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G D+ V P +
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG--HGTDVHVRKPQVVE----- 3253
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3254 GLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVN 3298
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4017 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4074
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4075 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4127
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4128 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4156
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++ +P+
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVRKPQV 3251
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3306
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3307 LEGQ--KITRVACGSSHSVA 3324
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H A+T G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3148
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3203
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3204 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3244
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G VV ++AG H A T+D +++WG N+ Q D L + P P +
Sbjct: 706 GLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRITKPEPTALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 760 DTKHI--VGIACGPAQSFA 776
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS + P + L GL V+ +S
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS--EDQTIPMLVTGLKGLKVIDVSC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQ 688
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L +T IAC L L++ G V+ S + P+ ++
Sbjct: 443 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSD------------TLGPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +++WG +GG++ G D V + M +
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRL---GHGDTVPLEEPKMISALSG 547
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
VV +ACGS ++ A+ + L+ G Y +L G Q M
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 36/132 (27%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L +Q+ G A T DG + A
Sbjct: 3955 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALAALRPIQLIGGEQTLFAVTADGKVEAL 4012
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWG 165
Q +V+D+ACGS TL L DD+++W
Sbjct: 4013 --------------------------------QGYRVIDIACGSGDAQTLCLTDDDTVWS 4040
Query: 166 CGWNEYNQLSMG 177
G +Y +L G
Sbjct: 4041 WGDGDYGKLGRG 4052
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG LALT++G VFSWG+G G+LG G++ + P EI LSG+GV+QI
Sbjct: 3267 VVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVIQI 3324
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D V P P+ + +V+ VA
Sbjct: 3325 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIG-----GLRGRRVIHVA 3377
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H LA+ D ++ G N++ Q G
Sbjct: 3378 VGALHCLAVTDSGQVYAWGDNDHGQQGSG 3406
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L V + CG +ALT+ G V++WG G +LG+ S D P+++
Sbjct: 4459 LPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS--VDHVRRPKKVA 4516
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G +Y WG N+ GQ+G +G + + P +S
Sbjct: 4517 ALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTVT-AIQRPRLVS-----A 4569
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 4570 LQGKHIVKVTCGSAHTLAL 4588
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ + D+ACG H A++ +G +++WG G G+LG+ + T ++P+ + A
Sbjct: 3204 PRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNAT--QLKPKLVAA 3261
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G VVQ++ G + A T+DG +++WG + G++G G PH E
Sbjct: 3262 LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG--SDTPH-----EIE 3314
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I V+ + CG++ +LAL +W G +Y +L G
Sbjct: 3315 RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3354
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P ++ VV +A G H LALT +G VFSWG G G+LG+ G ++ PR
Sbjct: 3149 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH---GNRTTLDKPR 3205
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
++ AL + ++ G HSAA + G LY WG G++G H +
Sbjct: 3206 QVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG---------HGDNATQLKP 3256
Query: 136 DFDS--QNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+ +VV VACGSR TLAL +D +++ G ++ +L G
Sbjct: 3257 KLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3302
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ + + V +A G HCLALT EG V++WG G G+LG+ G + + P+
Sbjct: 4299 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH---GNRVSYDRPK 4355
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L G+ V I+ G HSAA T G + WG G++G D + P +
Sbjct: 4356 LVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQL--RPKLVEALL 4413
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + +D+ACGS TL + DD+++W G +Y +L G
Sbjct: 4414 GY-----RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4452
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 95/239 (39%), Gaps = 63/239 (26%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS---------- 66
+ P ++H + V DIACG H A+T G V +WG G G+LG+ S
Sbjct: 4351 YDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVE 4410
Query: 67 ------------------------------------------GTDANMEPREIRALSGLG 84
G+D P +I +L+GLG
Sbjct: 4411 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 4470
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+++ G S A T+ G +Y WG + ++G G +D H P + Q K+
Sbjct: 4471 VIKVECGSQFSVALTKSGAVYTWGKGDFHRLG-HGSVD---HVRRPKKVAA---LQGKKI 4523
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
+ +A GS H +A D ++ G N+ QL G V+ + R + ++ IVK+
Sbjct: 4524 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGT----VTAIQRPRLVSALQGKHIVKV 4578
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V I CG LALT+ G V++WG G +LG+ G +P+ I
Sbjct: 3310 PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH--GGDQHVRKPQPIGG 3367
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G V+ ++ G H A T G +YAWG N+ GQ +G + V+ + D
Sbjct: 3368 LRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQ---QGSGNTFVNKKPALVIGLD--- 3421
Query: 140 QNIKVVDVACGSRHTLA 156
++ V VACGS H++A
Sbjct: 3422 -DVFVNRVACGSSHSIA 3437
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGV--VQISA 90
IA G ++QEG VF+ G G+ G+LG G N+ P ++ L V V + +
Sbjct: 3112 IAGGSKSLFIVSQEGRVFACGEGTNGRLGL---GVTYNVPLPHQLPVLHQYVVKKVAVHS 3168
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A T DG +++WG G++G + L P + E ++ I+ DVACG
Sbjct: 3169 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL--DKPRQV---EALRAKKIR--DVACG 3221
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S H+ A+ L+ G EY +L G +Q+
Sbjct: 3222 SSHSAAISSQGELYTWGLGEYGRLGHGDNATQLK 3255
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ + + V D+A G H LALT EG+VF+WG+G G+LG + + +++P
Sbjct: 725 LPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG--NGNCNGSLQPIL 782
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN--GGQVGVEGKLDLVVHDPHPMSWS 134
+ +L V +I AG +S A + +G +Y WG G Q LV S
Sbjct: 783 VESLPR--VQRIFAGSQYSVALSSEGQVYTWGKATCLGHQ--------LVERSVQGCSVP 832
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
S Q+ ++VD+A G H LAL ++G G N+ Q+
Sbjct: 833 RLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRNDCQQV 873
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+++ V + CG + +T G + +WG G+ +LG+ +S D P +
Sbjct: 673 VPTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGNS--DDRCLPTLVA 730
Query: 79 ALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSW 133
AL+ VV ++ +G HS A T +G ++AWG + G++G G L ++ + P
Sbjct: 731 ALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--- 787
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
+V + GS++++AL + ++
Sbjct: 788 ---------RVQRIFAGSQYSVALSSEGQVY 809
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 61/144 (42%), Gaps = 11/144 (7%)
Query: 36 CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHS 95
C H +A+ +SWG G +LG+ T A P +I AL V + G +S
Sbjct: 638 CEGRHFMAIDSNHNAYSWGAGEDHRLGH--GDTHARAVPTKIAALEQHCVQSVFCGCTYS 695
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
A T G L WG ++G G D + +E VVDVA GS H
Sbjct: 696 AVITCGGNLLTWGRGTYARLG-HGNSDDRCLPTLVAALAEH------TVVDVALGSGDAH 748
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
+LAL + ++ G +Y +L G
Sbjct: 749 SLALTSEGLVFAWGDGDYGKLGNG 772
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ RGQLG P E ALS L VQ++ G A T DG L+A G+
Sbjct: 4226 IYGWGHNHRGQLGGLEGSRIKTPTPCE--ALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4283
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
+GG++GV G + + +K V V G +H LAL + ++ G
Sbjct: 4284 GSGGRLGVGGSDSWAIP-----TLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEG 4338
Query: 170 EYNQLSMGCGVS 181
E +L G VS
Sbjct: 4339 EDGKLGHGNRVS 4350
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
SQ +P + + ++ACG H + +++ G+VF+WG G GQLG S T + +
Sbjct: 72 SQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVGS--THNSND 129
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P ++ +L G+ V +++ G H+A T+ G +Y WGW GQ+G PM
Sbjct: 130 PVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDAS----QSRPMYV 185
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCD-DNSLWGCGWNEYNQLSMG 177
+ I V +ACG HT+ + + D +++ GW+EY QL G
Sbjct: 186 KK---LHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHG 227
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 22/183 (12%)
Query: 20 PSRMDHFLDLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-P 74
P + L+V +ACG H A+T++G V++WG+G GQLG+ G N+ P
Sbjct: 22 PCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQLGH---GDSQNLVLP 78
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R I L +V+++ G H+ ++ G ++AWGW + GQ+GV + +DP ++
Sbjct: 79 RLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVGSTHN--SNDPVQVT-- 134
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
+KV VACGS HT + + ++ GW QL G SQ S P +
Sbjct: 135 ---SLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQ-------SRPMY 184
Query: 195 VKN 197
VK
Sbjct: 185 VKK 187
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 20/161 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P ++ + V +ACG H +T+ G V++WG G GQLG+ G DA+ P ++
Sbjct: 130 PVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGH---GDDASQSRPMYVK 186
Query: 79 ALSGLGVVQISAGGWHSAARTQ-DGFLYAWGWNNGGQVGVEGKLDLVV----HDPHPMSW 133
L G+ V ++ G H+ ++ D +++WGW+ GQ+G G D+ P P+
Sbjct: 187 KLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLG-HGGWDIFGGNKNRSPRPIK- 244
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D Q I ACGS +TLAL ++ GW + QL
Sbjct: 245 ----DLQQI-----ACGSSYTLALSSRGDVYAFGWGKDGQL 276
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 13/131 (9%)
Query: 51 FSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGG----WHSAARTQDGFLYA 106
FSWG + G LG + TDA P I AL GL VV ++ GG HSAA T+ G +Y
Sbjct: 1 FSWGFNNDGALGLGT--TDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYT 58
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
WG GQ+G +LV+ P + Q+ +V+VACGS HT+ + ++
Sbjct: 59 WGSGKSGQLGHGDSQNLVL--PRLI-----VGLQSNPIVEVACGSAHTVVVSKAGLVFAW 111
Query: 167 GWNEYNQLSMG 177
GW + QL +G
Sbjct: 112 GWGHFGQLGVG 122
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSRGQLGYPS---SGTDANMEPR 75
P + + V+ +ACG H + +++ + VFSWG GQLG+ G + N PR
Sbjct: 182 PMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNKNRSPR 241
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
I+ L QI+ G ++ A + G +YA+GW GQ+G
Sbjct: 242 PIKDLQ-----QIACGSSYTLALSSRGDVYAFGWGKDGQLG 277
>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
Length = 425
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
F + R D +ACG H L LT+ G VF+ G GQLG SS T + +EP E
Sbjct: 61 FFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHS-LEPIE 119
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ VV++SAG HS A T DG L+AWG N+ GQ+G+ + VV P + D
Sbjct: 120 VSGFD-EKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLAD 178
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV--SVMTRLSVPEH 194
+V VA GS H++A ++ + G +L G S + S+ T P
Sbjct: 179 -----ARVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRL 233
Query: 195 VKNCPIVKL 203
+KN VK+
Sbjct: 234 IKNLDGVKI 242
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS----- 65
K +V P ++D D V +A G +H +A T+EG V SWG G+LG+
Sbjct: 161 KRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSIL 220
Query: 66 --SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLD 122
S T + PR I+ L G+ + +I+AG HSA + G L+ +G G G +L
Sbjct: 221 GFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGDELR 280
Query: 123 LVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V + P S +VACG HT + D L+ G NE L +G
Sbjct: 281 PTVVEEVPFS------------EEVACGGYHTCVVTDSGDLYSWGSNENGCLGLG 323
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 8 GPLKMLSQVFHM--PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
G L + S V H P + F D V +++ G H A+T +G +F+WG S GQLG
Sbjct: 103 GQLGIGSSVTHSLEPIEVSGF-DEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGK 161
Query: 66 SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
PR++ L+ V ++ G HS A T++G + +WG G++G K ++
Sbjct: 162 RAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILG 221
Query: 126 HDPHPMSWSEDF--DSQNIKVVDVACGSRHTLALCDDNSLW 164
++ + +K+ +A G H+ + + +L+
Sbjct: 222 FSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLF 262
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 23/140 (16%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR-ALSGLGVVQISAG 91
++ACG H +T G ++SWG+ G LG GTD P ++ +L V ++S
Sbjct: 292 EVACGGYHTCVVTDSGDLYSWGSNENGCLGL--GGTDMVRSPEVLKSSLFKFPVSKVSC- 348
Query: 92 GWHSAARTQDGFLYAWGW------------NNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
GW A G +Y WGW ++GGQ+G +D +P + +
Sbjct: 349 GWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYF--EPMMVEF-----G 401
Query: 140 QNIKVVDVACGSRHTLALCD 159
+N + V V+CG HT A+ +
Sbjct: 402 KNARAVHVSCGFNHTGAIFE 421
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 53 WGNGSRGQLGYPS--SGTDANMEPREIRALSG----LGVVQISAGGWHSAARTQDGFLYA 106
WGNG G+LG + S P + G ++ GG H+ T+ G ++A
Sbjct: 37 WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
G N+ GQ+G+ V H P+ S FD KVV+V+ G+ H+ A+ D L+
Sbjct: 97 AGLNDFGQLGIGSS---VTHSLEPIEVS-GFDE---KVVEVSAGNHHSCAVTADGKLFAW 149
Query: 167 GWNEYNQLSMGCGVSQVSVMTRLSVPEHV-----KNCPIVKLFAEH 207
G N QL +G +V +S P V +V L +EH
Sbjct: 150 GRNSSGQLGLGKRAGKV-----VSTPRKVDCLADARVKMVALGSEH 190
>gi|56753337|gb|AAW24872.1| SJCHGC03307 protein [Schistosoma japonicum]
Length = 277
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+CG+ H + LT +G V+S G QLG+ SG ++ AL ++ ++ G +
Sbjct: 46 ISCGYTHTVFLTIDGEVYSCGCNEFQQLGHRQSGGRLG----KVAALEQYRIISVACGAY 101
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+AA T G L+ WG N+ GQ+G EG D V +S + +VV V+ G H
Sbjct: 102 HNAAVTYSGLLFTWGCNSNGQLGREGD-DTAVKLVRALS--------DHRVVQVSLGVEH 152
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV---KNCPIVKLFAEHWNS 210
TL L D ++ G N QL +G Q + +P+ + PI ++ A W+S
Sbjct: 153 TLVLTDTARVFAFGSNLKGQLGLGFSSEQ-----PVPIPQQILCLSGLPIRRITAGGWHS 207
Query: 211 ARLSV 215
L+V
Sbjct: 208 FVLTV 212
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ G +H L LT VF++G+ +GQLG S P++I LSGL + +
Sbjct: 140 DHRVVQVSLGVEHTLVLTDTARVFAFGSNLKGQLGLGFSSEQPVPIPQQILCLSGLPIRR 199
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
I+AGGWHS T G LYAWG N GQ+G+
Sbjct: 200 ITAGGWHSFVLTVSGSLYAWGSNKYGQLGL 229
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG H A+T G++F+WG S GQLG T + +RALS VVQ+S
Sbjct: 93 IISVACGAYHNAAVTYSGLLFTWGCNSNGQLGREGDDTAVKL----VRALSDHRVVQVSL 148
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+ T ++A+G N GQ+G L P P+ + + + + G
Sbjct: 149 GVEHTLVLTDTARVFAFGSNLKGQLG----LGFSSEQPVPIP-QQILCLSGLPIRRITAG 203
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ L SL+ G N+Y QL +
Sbjct: 204 GWHSFVLTVSGSLYAWGSNKYGQLGL 229
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI-KVVDVACGSRHTLALCDDNS 162
L+ WG GQ+ + V P + + QN+ + V ++CG HT+ L D
Sbjct: 8 LFVWGSCEDGQLTSDNTDTFNVLTPKAL------NVQNLPEFVQISCGYTHTVFLTIDGE 61
Query: 163 LWGCGWNEYNQL 174
++ CG NE+ QL
Sbjct: 62 VYSCGCNEFQQL 73
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 159 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 215
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 216 ACGQMCCMAVVDTGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIRVQRVA 268
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 269 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 322
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P +I
Sbjct: 94 PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCQIS 151
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 152 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 207
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 208 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 245
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG SSG P +
Sbjct: 199 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 256
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 257 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 313
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 314 -----RIIEIAACHSTHTSA 328
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +LSG
Sbjct: 46 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGK 103
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 104 KIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCQISTNLS--NK 157
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 158 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 206
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 253 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 309
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 310 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 347
>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
Length = 1038
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 110/247 (44%), Gaps = 45/247 (18%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P R+ + V +ACG DH +A+ + G +F WG G++ Y P+EI
Sbjct: 164 IPKRVVSLTETV--QVACGTDHTIAIVESGRIFVWGLQPDGRVLYA---------PKEIE 212
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L VVQ++AG + A T G ++ WG N GQ+G + + +E
Sbjct: 213 FFMALPVVQVNAGSDYYVALTVSGAMFVWGSNEYGQLGTS-------DNKERTTPAEVTT 265
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE----H 194
++ VV VACG HT+AL + L+ CG + QL G G S T L+V E H
Sbjct: 266 LHSLNVVHVACGHSHTVALTHEGRLFVCGSDSCGQL--GSGRKVPSQNTMLAVTEMLGTH 323
Query: 195 VK-----NCPIV-----KLFAEHWNSA--------RLSVPEHAKD--SSIVKLFAGHWNS 234
V C + K++A NS+ R V D + +V +FAG W+
Sbjct: 324 VTRVACGRCHTLALAGGKMYAFGLNSSGQLGSGNVRSQVTPRPIDALTDVVSVFAG-WDQ 382
Query: 235 GILVQSQ 241
+QS+
Sbjct: 383 SFCIQSK 389
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 9/170 (5%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+V + P ++ F+ L V + G D+ +ALT G +F WG+ GQLG +S P
Sbjct: 203 RVLYAPKEIEFFMALPVVQVNAGSDYYVALTVSGAMFVWGSNEYGQLG--TSDNKERTTP 260
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
E+ L L VV ++ G H+ A T +G L+ G ++ GQ+G K+ P +
Sbjct: 261 AEVTTLHSLNVVHVACGHSHTVALTHEGRLFVCGSDSCGQLGSGRKV------PSQNTML 314
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ V VACG HTLAL ++ G N QL G SQV+
Sbjct: 315 AVTEMLGTHVTRVACGRCHTLALA-GGKMYAFGLNSSGQLGSGNVRSQVT 363
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 9/134 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA G H L L +G V+S G+ G+LG + + + G+ +VQI+A
Sbjct: 70 VRAIATGERHTLFLADDGKVWSCGSNENGELGR-GGCQEGSFTIYPVLLSGGVNIVQIAA 128
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+ A DG L+AWG N+ GQ+ + + +S +E V VACG
Sbjct: 129 GRAHNMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKRVVSLTE--------TVQVACG 180
Query: 151 SRHTLALCDDNSLW 164
+ HT+A+ + ++
Sbjct: 181 TDHTIAIVESGRIF 194
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD----LVVHDPHPMSWSEDFD 138
+ V+ + G R Q LYA+G+ GQ+G G L+ +V P + +
Sbjct: 9 ISAVKETGIGRRRMVRRQ---LYAFGYGGDGQLGNRGFLNGDDGNIVKTPQVVVGAPT-S 64
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V +A G RHTL L DD +W CG NE +L G
Sbjct: 65 HDGVSVRAIATGERHTLFLADDGKVWSCGSNENGELGRG 103
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 317
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P +I
Sbjct: 89 PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCQIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG SSG P +
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSTHTSA 323
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +LSG
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGK 98
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 99 KIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCQISTNLS--NK 152
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 201
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
>gi|168046566|ref|XP_001775744.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672896|gb|EDQ59427.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 441
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IACG H +T G V ++G G GQ+G S T+ + P + L GL +V I+A
Sbjct: 266 IKAIACGGRHSAVITDTGAVLTFGWGLYGQIGQGS--TEDELSPSHVSTLQGLSIVGIAA 323
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G WH+ T G +Y++G N GQ+GV G + P + V VACG
Sbjct: 324 GLWHTLCITNTGDVYSFGGNQFGQLGVGGN----NAELSPRLIDAPLLGDELSVA-VACG 378
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+RH++ L ++ GWN+Y QL +G
Sbjct: 379 ARHSVVLTGSGKIFAWGWNKYGQLGLG 405
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS + L + IA G H L +T G V+S+G GQLG G +A + PR I A
Sbjct: 307 PSHVSTLQGLSIVGIAAGLWHTLCITNTGDVYSFGGNQFGQLGV--GGNNAELSPRLIDA 364
Query: 80 --LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L V ++ G HS T G ++AWGWN GQ+G+ D D PM + +
Sbjct: 365 PLLGDELSVAVACGARHSVVLTGSGKIFAWGWNKYGQLGLG---DCNNRD-LPMQVTMN- 419
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ +ACG HTLA
Sbjct: 420 --DGGRAASIACGWWHTLA 436
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 80/197 (40%), Gaps = 28/197 (14%)
Query: 9 PLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLAL--------TQEGIVFSWGNGSRGQ 60
P F P + + ++ +A G H LAL T G V+ WG G GQ
Sbjct: 169 PEASEENAFAPPCLVKLDPGIRISSVAAGGRHTLALSDNTNHMETDVGQVWGWGYGGEGQ 228
Query: 61 LG---------YPSSGTDANM----EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
LG +P NM R + G + I+ GG HSA T G + +
Sbjct: 229 LGLGSCIRIVSFPQHIPCFNMTDTGNARSGVPIPGSYIKAIACGGRHSAVITDTGAVLTF 288
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
GW GQ+G D +S S Q + +V +A G HTL + + ++ G
Sbjct: 289 GWGLYGQIGQGSTED-------ELSPSHVSTLQGLSIVGIAAGLWHTLCITNTGDVYSFG 341
Query: 168 WNEYNQLSMGCGVSQVS 184
N++ QL +G +++S
Sbjct: 342 GNQFGQLGVGGNNAELS 358
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 104/263 (39%), Gaps = 70/263 (26%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWG--------- 54
+L SG + + +++ +P+ D + A G+ HC A+T +G V++WG
Sbjct: 80 YLISGKQQEVPELYPLPT------DSPIVHAAGGWAHCAAVTGDGEVYTWGWSECTKPTG 133
Query: 55 NGSRGQLGYPSSGTDANME---------------------------PREIRALSGLGVVQ 87
+ L ++G+D E P ++ G+ +
Sbjct: 134 KQTLRNLACKTTGSDGAEEVIKRRKVITNSAEGQSPEASEENAFAPPCLVKLDPGIRISS 193
Query: 88 ISAGGWHSAA--------RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
++AGG H+ A T G ++ WG+ GQ+G+ G +V P + D+
Sbjct: 194 VAAGGRHTLALSDNTNHMETDVGQVWGWGYGGEGQLGL-GSCIRIVSFPQHIPCFNMTDT 252
Query: 140 QNIK---------VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
N + + +ACG RH+ + D ++ GW Y Q+ G ++S
Sbjct: 253 GNARSGVPIPGSYIKAIACGGRHSAVITDTGAVLTFGWGLYGQIGQGSTEDELS------ 306
Query: 191 VPEHV---KNCPIVKLFAEHWNS 210
P HV + IV + A W++
Sbjct: 307 -PSHVSTLQGLSIVGIAAGLWHT 328
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 50/206 (24%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V + CGF +A+++ G + +WG+ + Y SG E E+ L + +
Sbjct: 49 TVCNGGCGFG--IAISESGNLNTWGSTTDHGHCYLISGKQ--QEVPELYPLPTDSPIVHA 104
Query: 90 AGGW-HSAARTQDGFLYAWGWN-----NGGQ---------VGVEGKLDLV----VHDPHP 130
AGGW H AA T DG +Y WGW+ G Q G +G +++ V
Sbjct: 105 AGGWAHCAAVTGDGEVYTWGWSECTKPTGKQTLRNLACKTTGSDGAEEVIKRRKVITNSA 164
Query: 131 MSWSEDFDSQN-------------IKVVDVACGSRHTLALCDDNS--------LWGCGWN 169
S + +N I++ VA G RHTLAL D+ + +WG G+
Sbjct: 165 EGQSPEASEENAFAPPCLVKLDPGIRISSVAAGGRHTLALSDNTNHMETDVGQVWGWGYG 224
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHV 195
QL +G S + +S P+H+
Sbjct: 225 GEGQLGLG------SCIRIVSFPQHI 244
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG LALT++G VFSWG+G G+LG G++ + P EI LSG+GVVQI
Sbjct: 3179 VVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVVQI 3236
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D V P P+ + +V+ VA
Sbjct: 3237 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIG-----GLRGRRVIHVA 3289
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H LA+ D ++ G N++ Q G
Sbjct: 3290 VGALHCLAVTDAGQVYAWGDNDHGQQGSG 3318
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L V + CG +ALT+ G V++WG G +LG+ S D P+++
Sbjct: 4284 LPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS--VDHVRRPKKVA 4341
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G +Y WG N+ GQ+G +G + + P ++
Sbjct: 4342 ALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTVT-AIQRPRLVA-----A 4394
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 4395 LQGKHIVKVTCGSAHTLAL 4413
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ D+ACG H A++ +G +++WG G G+LG+ + T ++P+ + AL+G VVQ++
Sbjct: 3127 IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTT--QLKPKLVTALAGRRVVQVAC 3184
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T+DG +++WG + G++G G PH E I VV +
Sbjct: 3185 GSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG--SDTPH-----EIERLSGIGVVQIE 3237
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG++ +LAL +W G +Y +L G
Sbjct: 3238 CGAQFSLALTRAGEVWTWGKGDYYRLGHG 3266
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P ++ VV +A G H LALT +G VFSWG G G+LG+ + T +PR
Sbjct: 3061 LPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLD--KPRL 3118
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL + ++ G HSAA + G LY WG G++G H +
Sbjct: 3119 VEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG---------HGDNTTQLKPK 3169
Query: 137 FDS--QNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+ +VV VACGSR TLAL +D +++ G ++ +L G
Sbjct: 3170 LVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3214
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ + + V +A G HCLALT EG V++WG G G+LG+ G + + P+
Sbjct: 4124 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH---GNRMSYDRPK 4180
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L+G+ V I+ G HSAA T G + WG G++G D + P +
Sbjct: 4181 LVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALL 4238
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + +D+ACGS TL + DD+++W G +Y +L G
Sbjct: 4239 GY-----RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4277
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 95/239 (39%), Gaps = 63/239 (26%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS---------- 66
+ P ++H + V DIACG H A+T G V +WG G G+LG+ S
Sbjct: 4176 YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 4235
Query: 67 ------------------------------------------GTDANMEPREIRALSGLG 84
G+D P +I +L+GLG
Sbjct: 4236 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 4295
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV++ G S A T+ G +Y WG + ++G G +D H P + Q K+
Sbjct: 4296 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLG-HGSVD---HVRRPKKVAA---LQGKKI 4348
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
+ +A GS H +A D ++ G N+ QL G V+ + R + ++ IVK+
Sbjct: 4349 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGT----VTAIQRPRLVAALQGKHIVKV 4403
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V I CG LALT+ G V++WG G +LG+ G +P+ I
Sbjct: 3222 PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH--GGDQHVRKPQPIGG 3279
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWS 134
L G V+ ++ G H A T G +YAWG N+ GQ G V K LV+
Sbjct: 3280 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI--------- 3330
Query: 135 EDFDSQNIKVVDVACGSRHTLA 156
D+ + V VACGS H++A
Sbjct: 3331 -GLDA--VFVNRVACGSSHSIA 3349
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ + D +V D+A G H LALT EG+VF+WG+G G+LG + + +++P
Sbjct: 710 LPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG--NGNCNGSLQPIL 767
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN--GGQVGVEGKLDLVVHDPHPMSWS 134
+ +L V ++ AG S A + +G LY WG G Q LV S
Sbjct: 768 VESLPR--VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQ--------LVERSVQGCSVP 817
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
S Q+ ++VDVA H LAL ++G G N+ Q+
Sbjct: 818 RLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGV--VQISA 90
IA G ++Q+G V++ G G+ G+LG G N+ P ++ L V V + +
Sbjct: 3024 IAGGSKSLFIVSQDGKVYACGEGTNGRLGL---GVTHNVPLPHQLPVLRQYVVKKVAVHS 3080
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A T DG +++WG G++G + L P E ++ I+ DVACG
Sbjct: 3081 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL--DKPR---LVEALRAKKIR--DVACG 3133
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S H+ A+ L+ G EY +L G +Q+
Sbjct: 3134 SSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLK 3167
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+++ V + CG + A+T G + +WG G+ +LG+ +S D P +
Sbjct: 658 VPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNS--DDRSLPTLVV 715
Query: 79 ALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSW 133
ALS VV ++ +G HS A T +G ++AWG + G++G G L ++ + P
Sbjct: 716 ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--- 772
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
+V V GS+ ++AL + L+
Sbjct: 773 ---------RVQRVFAGSQFSVALSSEGQLY 794
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 20 PSRMDHFLDLVVTDIA--CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P M+ V IA C H LA+ +SWG G +LG+ T A P +I
Sbjct: 605 PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGH--GDTHARAVPTKI 662
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL V + G +SAA T G L WG ++G G D ++ S+
Sbjct: 663 AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLG-HGNSDDRSLPTLVVALSDHM 721
Query: 138 DSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
VVDVA GS H+LAL + ++ G +Y +L G
Sbjct: 722 ------VVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 757
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V WG + QLG G+ + P + +S L + I+ G +QDG +YA G
Sbjct: 2988 VMVWGLNDKEQLGG-LKGSKVKV-PTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGE 3045
Query: 110 NNGGQVGVEGKLDLVVHD---PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
G++G+ V H+ PH + + +K V V G +H LAL D ++
Sbjct: 3046 GTNGRLGLG-----VTHNVPLPHQLPVLRQY---VVKKVAVHSGGKHALALTLDGKVFSW 3097
Query: 167 GWNEYNQLSMG 177
G E +L G
Sbjct: 3098 GEGEDGKLGHG 3108
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P +I
Sbjct: 89 PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCQIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG SSG P +
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTMEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSTHTSA 323
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +LSG
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGK 98
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 99 KIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCQISTNLS--NK 152
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 201
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 MEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
Length = 391
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 89/183 (48%), Gaps = 32/183 (17%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G +K +S +P R+ + VT IA G H LAL Q G V++WGN GQLG +
Sbjct: 183 GDIKQIS----VPVRVQGLEN--VTMIAVGAFHNLALVQHGEVWAWGNNEYGQLG--TGD 234
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG---------VE 118
T P ++ L+GL +V I+AGGWHS A T DG +Y WG G++G +
Sbjct: 235 TQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKMLP 294
Query: 119 GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
K+ L+ +P VV V+CG H++A ++ G ++ +L G
Sbjct: 295 QKVHLLAGEP---------------VVQVSCGGTHSVAATISGRMFSFGRGDHGRLGYGG 339
Query: 179 GVS 181
V+
Sbjct: 340 AVT 342
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 49/203 (24%)
Query: 23 MDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG 82
+D D V + G + LA+ ++G +F+WG RG LG+P T P +++AL+
Sbjct: 32 VDALRDHNVVSVVAGSRNSLAICEDGRLFTWGWNQRGTLGHPPE-TKTESTPSQVKALAN 90
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-------------------- 122
+ +VQ + GGWH A ++G YAWG N GQ E +
Sbjct: 91 VKIVQAAIGGWHCLAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQR 150
Query: 123 ---------------LVVHDPHPMSWSEDFDSQNIKVVDV-------------ACGSRHT 154
++ + H +W + + +IK + V A G+ H
Sbjct: 151 CAPRLCVAAGGTHSVVLTEEGHVWTWGQPWPPGDIKQISVPVRVQGLENVTMIAVGAFHN 210
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL +W G NEY QL G
Sbjct: 211 LALVQHGEVWAWGNNEYGQLGTG 233
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P + LV+ DIA G H +ALT +G V+ WG G G+LG+ + M
Sbjct: 235 TQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGF-GDDKSSKML 293
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG----------VEGKLDL 123
P+++ L+G VVQ+S GG HS A T G ++++G + G++G VE + L
Sbjct: 294 PQKVHLLAGEPVVQVSCGGTHSVAATISGRMFSFGRGDHGRLGYGGAVTTGHPVEVPVSL 353
Query: 124 VVHDPHPMSWSEDFDSQNIKVVD-VACGSRHTLAL 157
+ H + ++ + VV VACG RH LA+
Sbjct: 354 HHYSRHNIVSEDEANGSTRWVVKLVACGGRHALAV 388
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 26/133 (19%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPRE----IRALSGLGVVQISAGGWHSAARTQDGFLY 105
V +WG G GQLG N++ ++ + AL VV + AG +S A +DG L+
Sbjct: 7 VLAWGAGEDGQLGL------GNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLF 60
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ-----NIKVVDVACGSRHTLALCDD 160
WGWN G +G H P + +E SQ N+K+V A G H LA+ ++
Sbjct: 61 TWGWNQRGTLG---------HPPE--TKTESTPSQVKALANVKIVQAAIGGWHCLAVDEE 109
Query: 161 NSLWGCGWNEYNQ 173
+ G NEY Q
Sbjct: 110 GRTYAWGGNEYGQ 122
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ L + +ACG H LAL+++G VFSWG+G G+LG P I
Sbjct: 231 PHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGYGGRLG--QGHLRDRFTPIRICG 288
Query: 80 LSGLGVVQISAGGWHSAAR---TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L L + Q++ +HSAA ++ G L+++G N+ GQ+G+ L + S SE
Sbjct: 289 LESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEH 348
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
K+ VACGS H+ AL + SLW G NE QL G
Sbjct: 349 ------KISRVACGSFHSAALAEHGSLWLWGCNESGQLGNG 383
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLAL---TQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
P R+ L +T +AC H A+ +++G +FS+G GQLG P + +
Sbjct: 283 PIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQLGIPEDKLLTSY-IQC 341
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ +LS + +++ G +HSAA + G L+ WG N GQ+G + P
Sbjct: 342 VSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGNYTSTSL----PSLLEAG 397
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ-----VSVMTRLSV 191
D ++ V++VACG +H+ + ++ CG N Y QL +Q +V R+ V
Sbjct: 398 NDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRV 457
Query: 192 PEHVK 196
P +
Sbjct: 458 PTDFR 462
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+++WG G+ G LG+ +A+ P + AL G + +++ G H+ A ++DG +++WG
Sbjct: 209 IYTWGEGTNGMLGHGEDTQEAH--PHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGS 266
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC---DDNSLWGC 166
GG++G D P + E ++ + VAC H+ A+C +L+
Sbjct: 267 GYGGRLGQGHLRDRFT--PIRICGLE-----SLNLTQVACNEFHSAAVCACSKQGALFSF 319
Query: 167 GWNEYNQLSM 176
G N+Y QL +
Sbjct: 320 GENDYGQLGI 329
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG---YPSSGTDANMEPREIRALSGLGVVQ 87
++ +ACG H AL + G ++ WG GQLG Y S+ + +E L V++
Sbjct: 350 ISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGNYTSTSLPSLLEAGN--DLRHDAVME 407
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HSA T+ G ++ G N GQ+G + H + ++ + + + V V
Sbjct: 408 VACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPT-DFRCVHV 466
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
ACG HT + D ++ G + +L G
Sbjct: 467 ACGDSHTAVVTDGGEIFTWGRGKGGRLGHG 496
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 19 MPSRMDHFLDL---VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-YPSSGTDANMEP 74
+PS ++ DL V ++ACG H +T++G +F G+ + GQLG + + D ++
Sbjct: 390 LPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQDDHVTY 449
Query: 75 R---EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
+R + V ++ G H+A T G ++ WG GG++G L+ H P +
Sbjct: 450 NVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLGHGDNLNR--HLPTEI 507
Query: 132 SWSEDFDSQNIKVVDVACGSRHT 154
+ + V V+CG HT
Sbjct: 508 ----EIGMEGKHVRGVSCGRAHT 526
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-P 74
+++ R+ D +ACG H +T G +F+WG G G+LG+ G + N P
Sbjct: 448 TYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLGH---GDNLNRHLP 504
Query: 75 REIR-ALSGLGVVQISAGGWHSA 96
EI + G V +S G H+A
Sbjct: 505 TEIEIGMEGKHVRGVSCGRAHTA 527
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
+ + P ++L +PS H + L ACG H + LT+EG+VFS G GQLG
Sbjct: 222 IGTRPNQLLPHRVELPS--PHLVRLA----ACGQYHTIFLTEEGMVFSCGKNLNGQLGLG 275
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
S + N+ P I AL I+ G H+ +DG L+ +G+N+ GQ+G+ G D V
Sbjct: 276 SR-SSTNV-PTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGL-GHTDSV 332
Query: 125 VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
PM +N+KVV ++CG+ T L + LW G N + QL +G
Sbjct: 333 ---SSPMQVE---TLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLG 379
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 15/154 (9%)
Query: 28 DLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR--EIRALSGL 83
D V ++C G +H L +T G V+S G + GQLG S+ M P + +L +
Sbjct: 133 DCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQLGLGST----KMSPSLLLVESLKHV 188
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
V+ S HS + DG +++G N+ GQ+G+ + + ++ PH + + S ++
Sbjct: 189 RVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLL--PHRV----ELPSPHL- 241
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V ACG HT+ L ++ ++ CG N QL +G
Sbjct: 242 VRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLG 275
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 15/174 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQIS 89
V +C + H + ++ +G FS+G GQLG GT N + P + S V +
Sbjct: 190 VLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGI---GTRPNQLLPHRVELPSPHLVRLAA 246
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G +H+ T++G +++ G N GQ+G+ + V P ++ ++ + I AC
Sbjct: 247 CGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNV--PTLIAALQERPASMI-----AC 299
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
G HT + +D L+ G+N QL +G SV + + V E ++N +VK+
Sbjct: 300 GYSHTCVVLEDGKLFTFGYNHQGQLGLG---HTDSVSSPMQV-ETLRNVKVVKI 349
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
VF+ G +G+LG+ S +E +++L +V+++AG S T++G +Y G
Sbjct: 42 VFACGQNRKGELGH--STFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGL 99
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFD-----SQNIKVVDVAC--GSRHTLALCDDNS 162
N+ GQ+ E +S D + + KVV V+C G+ H L +
Sbjct: 100 NSTGQLARETHQGSANRSK---EYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQ 156
Query: 163 LWGCGWNEYNQLSMG 177
++ CG N + QL +G
Sbjct: 157 VYSCGCNNHGQLGLG 171
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR---EIRALSGL---- 83
+ +A G + LT+EG V+ G S GQL + AN +I + GL
Sbjct: 75 IVKVAAGSETSYFLTEEGKVYCCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDC 134
Query: 84 GVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
VVQ+S G H T G +Y+ G NN GQ+G L P + E ++
Sbjct: 135 KVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQLG----LGSTKMSP-SLLLVESL--KH 187
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++V+ +C H++ + D S + G N+ QL +G
Sbjct: 188 VRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIG 223
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 159 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 215
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 216 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 268
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 269 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 322
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 151
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 152 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 207
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 208 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 245
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 199 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 256
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 257 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 313
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 314 -----RIIEIAACHSTHTSA 328
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +L+G
Sbjct: 46 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGK 103
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 104 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 157
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 158 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 206
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 253 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 309
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 310 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 347
>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
Length = 819
Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats.
Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 21/171 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG H +AL ++G V++WG S GQLG +G + P++I L V++++AG
Sbjct: 114 VACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERI-PKKIEGLED--VIKVAAGSR 170
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A +DG ++AWG+N GQ+G E + P+ V D+ G
Sbjct: 171 HSLALKKDGTVWAWGYNYYGQLGDESN----IRRNTPVQV-----KGLTGVKDIDAGDFF 221
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQ--------VSVMTRLSV-PEHV 195
++AL DD ++WG G+N Q+ G G++ VS +T++S EHV
Sbjct: 222 SVALRDDGTVWGWGYNYKGQIGCGTGINSNVPLQTVGVSNITQISAGDEHV 272
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRALSGL-GVVQI 88
VTD++ G +H LAL +G V+S GN GQLG S + ++ E + GL +V +
Sbjct: 566 VTDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQTHHNSYSETFNLTKAKGLTNIVAV 625
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+AG HS A DG ++ WG N G++ G D +P E+ + ++
Sbjct: 626 AAGSEHSVALKNDGTVWTWGSNQFGELA-HGN-DTFSLEPMQAEGLEN-------ICAIS 676
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ + LAL +D ++W G N Y QL G
Sbjct: 677 AGNNYNLALKEDGTVWAWGDNTYGQLGNG 705
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
G VQ++ G +H+ A +DG ++ WG+N+ GQ+G+ G+ + P + ED
Sbjct: 110 GFVQVACGEYHTIALKKDGTVWTWGYNSYGQLGL-GEAGEIERIPKKIEGLED------- 161
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V+ VA GSRH+LAL D ++W G+N Y QL
Sbjct: 162 VIKVAAGSRHSLALKKDGTVWAWGYNYYGQL 192
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
Query: 43 ALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ-ISAGGWHSAARTQD 101
AL +G V++WG G LG ++ ++ + +SG G V+ IS G H A D
Sbjct: 374 ALKNDGTVWTWGKNINGILGLGTA-----LDSQIPSVVSGTGDVEVISCGKTHMAIIKSD 428
Query: 102 GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDN 161
G L+ WG+N GQ+G G +D + +P ++ + + ++CG +H LA+ ++
Sbjct: 429 GTLWTWGYNIYGQLG-NGNVDYIT-EPVTINGISN-------ISKISCGGKHVLAIDENK 479
Query: 162 SLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWN 209
+LW G N+Y QL G+S S +P VK+ VK +N
Sbjct: 480 TLWAWGNNDYLQLIDDVGLSAESGSNDYCIPFAVKSEKDVKDIVAAFN 527
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P ++ F + V + G A+ ++G ++ WG+ + G +G + + N
Sbjct: 298 ASFLRIPEKLSSFTE--VKSVKAGTMVSAAIKEDGTLWIWGDNTYGIMG---NSRNINSS 352
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + + +SG+ V+++ + +AA DG ++ WG N G +G+ LD + P +S
Sbjct: 353 PVQRKDISGIKAVELNQ--YCAAALKNDGTVWTWGKNINGILGLGTALDSQI--PSVVSG 408
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ D + ++CG H + D +LW G+N Y QL G
Sbjct: 409 TGDVEV-------ISCGKTHMAIIKSDGTLWTWGYNIYGQLGNG 445
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 19/147 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G ++ LAL ++G V++WG+ + GQLG + T P ++ L +V+I AG
Sbjct: 675 ISAGNNYNLALKEDGTVWAWGDNTYGQLG--NGSTYKTNVPVQVDGLEN--IVKIIAGRD 730
Query: 94 HSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
S A T+DG ++AWG NN GQ+G + +L V D S + G
Sbjct: 731 SSFAITKDGDVWAWGKNNCGQLGDGTTQNRLTPVKIDAFKGCKS------------IVSG 778
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
T+ L +D ++ G G N +++G
Sbjct: 779 MDFTMVLMNDGTVIGVGSNVSGVMTLG 805
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 13/108 (12%)
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P +I L G V +S G H A DG++Y+ G + GQ+G +G H S+
Sbjct: 557 PYKIEGLEG--VTDVSVGKNHILALKDDGYVYSAGNSYWGQLG-DGS------QTHHNSY 607
Query: 134 SEDFDSQNIK----VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
SE F+ K +V VA GS H++AL +D ++W G N++ +L+ G
Sbjct: 608 SETFNLTKAKGLTNIVAVAAGSEHSVALKNDGTVWTWGSNQFGELAHG 655
Score = 40.8 bits (94), Expect = 0.47, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V VACG HT+AL D ++W G+N Y QL +G
Sbjct: 112 VQVACGEYHTIALKKDGTVWTWGYNSYGQLGLG 144
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 159 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 215
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 216 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 268
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 269 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 322
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 151
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 152 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 207
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 208 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 245
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 199 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 256
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 257 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 313
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 314 -----RIIEIAACHSTHTSA 328
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +L+G
Sbjct: 46 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGK 103
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 104 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 157
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 158 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 206
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 253 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 309
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 310 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 347
>gi|330805668|ref|XP_003290801.1| hypothetical protein DICPUDRAFT_56953 [Dictyostelium purpureum]
gi|325079048|gb|EGC32668.1| hypothetical protein DICPUDRAFT_56953 [Dictyostelium purpureum]
Length = 920
Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 74/138 (53%), Gaps = 12/138 (8%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-----DANMEPREIRALSGLGVV 86
T ++CG DH LALT G VF+WG GQ+G+ +S + D + + +LS +
Sbjct: 358 TQVSCGNDHSLALTTNGEVFAWGESKHGQIGFATSMSTLVDFDTSTPIKVRESLSNESIT 417
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL---DLVVHDPH----PMSWSEDFDS 139
QI+AG +HS A ++ +Y WG N+ QVG E + ++ P+ P+S + S
Sbjct: 418 QIAAGAYHSMALSRSNHIYCWGLNDYYQVGEEIESMGHQKIISTPYRIRAPVSENSKLKS 477
Query: 140 QNIKVVDVACGSRHTLAL 157
+ ++ +A G R ++A+
Sbjct: 478 KERPILQIAAGGRSSMAI 495
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 32/215 (14%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALS---------G 82
+ACG +H + +G V+S G+ QLGY S D ME PR I +L+
Sbjct: 222 VACGLNHTVFSLVDGCVYSMGDNKHFQLGYVSK-EDEEMEYRPRLIESLNLPKKQLEQRY 280
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG---------VEGKLDLVVHDPHPMSW 133
+ IS G S Q G +Y WG N+ GQ G KL ++ +D +S
Sbjct: 281 TNIKSISCGSNFSVCVKQ-GNIYTWGLNSVGQCGFSPKETKSITAPKLLIIYNDASTLSN 339
Query: 134 SEDFDSQNIK-------VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV--- 183
+ S K V+CG+ H+LAL + ++ G +++ Q+ +S +
Sbjct: 340 EDKNQSGTNKKKKPTFTFTQVSCGNDHSLALTTNGEVFAWGESKHGQIGFATSMSTLVDF 399
Query: 184 SVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEH 218
T + V E + N I ++ A ++S LS H
Sbjct: 400 DTSTPIKVRESLSNESITQIAAGAYHSMALSRSNH 434
Score = 63.2 bits (152), Expect = 9e-08, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 31/175 (17%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-------------DANMEPREI 77
+ I+CG + + + Q G +++WG S GQ G+ T DA+ E
Sbjct: 283 IKSISCGSNFSVCVKQ-GNIYTWGLNSVGQCGFSPKETKSITAPKLLIIYNDASTLSNED 341
Query: 78 RALSG--------LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV--HD 127
+ SG Q+S G HS A T +G ++AWG + GQ+G + +V
Sbjct: 342 KNQSGTNKKKKPTFTFTQVSCGNDHSLALTTNGEVFAWGESKHGQIGFATSMSTLVDFDT 401
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL-----SMG 177
P+ E +++I +A G+ H++AL N ++ G N+Y Q+ SMG
Sbjct: 402 STPIKVRESLSNESI--TQIAAGAYHSMALSRSNHIYCWGLNDYYQVGEEIESMG 454
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 40/193 (20%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-- 77
P+ +++ DL +A G H L + +G ++S G G+ G+ G + T N +P
Sbjct: 59 PTFLNNQDDLYSKSVAIGLAHSLLIDSKGQLYSTGKGANGRTGMGNESTIFNFKPVVFNN 118
Query: 78 ----------------------RALSG--LGVVQISAGGWHSAARTQDGFLYAWGWNNGG 113
R ++G V++IS GG HSA T++ L+ +G N+ G
Sbjct: 119 DELTEANKYRYSSSYYQPRFLNRPITGNHTKVIKISCGGAHSAFITENFELFTFGRNDRG 178
Query: 114 QVGVEGKLDLVVHDPHPMSWSE---DFDSQNIKV--------VD-VACGSRHTLALCDDN 161
Q+G G LD +V P +++ + S++IK VD VACG HT+ D
Sbjct: 179 QLG-HGLLDQLV-IPKKVNYQHYEYEESSKSIKENKLITASNVDLVACGLNHTVFSLVDG 236
Query: 162 SLWGCGWNEYNQL 174
++ G N++ QL
Sbjct: 237 CVYSMGDNKHFQL 249
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 13/165 (7%)
Query: 30 VVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
V +ACG L +T GIVFSWG+G G+LG GTD + P+ + L + VV+
Sbjct: 252 TVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLG--RGGTDGSKTPKIVDKLLDINVVK 309
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+ GG SAA T G +Y WG + ++G G + H +P D K+ D+
Sbjct: 310 VFCGGQFSAALTAHGEVYTWGKGDAYRLG-HGSEE---HVRYPKVIESLRDK---KIKDL 362
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQL--SMGCGVSQVSVMTRLS 190
+ G+ H LAL +D ++G G N+Y Q+ ++G VS+ ++ LS
Sbjct: 363 SVGTTHILALTEDQFVYGWGRNDYGQIDPTLGPVVSEPTLCPTLS 407
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+ F D +T IA D H LALTQ+G V+SWGNG G+LG+ T + EP+
Sbjct: 134 QYPLRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGH--GDTVSYDEPK 191
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I +L +V I+ G +SAA + G LY WG N G++G G D V+ +
Sbjct: 192 LIESLLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLG-HGNFDDVLTPTLVTTL-- 248
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
+ VV VACGS + LC S W + + +G G + S + + + +
Sbjct: 249 ----KGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPK--IVDKL 302
Query: 196 KNCPIVKLFAEHWNSARLS 214
+ +VK+F SA L+
Sbjct: 303 LDINVVKVFCGGQFSAALT 321
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPR 75
+P + L IA G ++QEG +++ G G+ G+LG G D N+ EP+
Sbjct: 2610 IKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGL---GDDNNVCEPK 2666
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
I LS + V + +GG H+ A TQDG +++WG G++G + L P +
Sbjct: 2667 AIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISL--DKPKLI-- 2722
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E S+ I+ D+ACGS H+ A+ + L+ G EY +L G ++Q
Sbjct: 2723 -EILKSKRIR--DIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQT 2769
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
P + V+ +A G H LALTQ+G VFSWG G G+LG+ G +++ P+
Sbjct: 2665 PKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGH---GNCISLDKPKL 2721
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I L + I+ G HSAA +G LY WG G+ G G D + + +
Sbjct: 2722 IEILKSKRIRDIACGSGHSAAIASNGELYTWGL---GEYGRLGHGDTITQTRPKL--VQA 2776
Query: 137 FDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VV VACGSR T+AL D ++ G ++ +L G
Sbjct: 2777 LVGQ--RVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRG 2817
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + + V +ACG +ALT +G V+SWG+G G+LG G+D P +
Sbjct: 2771 PKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLG--RGGSDGCYTPLAV 2828
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+GLGV+Q+ G S A T+ G ++ WG + ++G G +D H +
Sbjct: 2829 DRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLG-HG------NDHHVRKPTLVE 2881
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K++ VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 2882 GLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGATSVN 2926
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
+ P +D L V + CG LALT+ G V++WG G +LG+ G D ++ +P
Sbjct: 2823 YTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGH---GNDHHVRKPTL 2879
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPM 131
+ L G ++ ++ G H A T G +YAWG N+ GQ G V K LV
Sbjct: 2880 VEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGATSVNRKPSLV------- 2932
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLA 156
D ++ +V V+CGS H++A
Sbjct: 2933 -----HDLEDARVNRVSCGSSHSIA 2952
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P +D LD+ V + CG ALT G V++WG G +LG+ G++ ++ P+ I
Sbjct: 296 PKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGH---GSEEHVRYPKVIE 352
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+L + +S G H A T+D F+Y WG N+ GQ ++ L VV +P +
Sbjct: 353 SLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQ--IDPTLGPVVSEP---TLCPTLS 407
Query: 139 SQNIKVVDVACGSRHTLALC 158
S+ V+ +A G + A C
Sbjct: 408 SKT--VIGLASGPTQSFAWC 425
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
Q+ V+ WG + QLG G+ + P LS L + I+ G +Q+G LY
Sbjct: 2587 QQSAVYVWGLNDKDQLG-GLKGSKIKL-PIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLY 2644
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
A G G++G+ D V +P + + F IK V V G +H LAL D ++
Sbjct: 2645 ACGEGTNGRLGLGD--DNNVCEPKAIPFLSQF---VIKKVAVHSGGKHALALTQDGKVFS 2699
Query: 166 CGWNEYNQLSMGCGVS 181
G E +L G +S
Sbjct: 2700 WGEGEDGKLGHGNCIS 2715
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 317
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P +I
Sbjct: 89 PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCQIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG SSG P +
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSTHTSA 323
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +LSG
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGK 98
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 99 KIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCQISTNLS--NK 152
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 201
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
>gi|114598774|ref|XP_001175007.1| PREDICTED: E3 ISG15--protein ligase HERC5-like, partial [Pan
troglodytes]
Length = 207
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 78/148 (52%), Gaps = 16/148 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG +PS+ T P+ + L+G+ +
Sbjct: 44 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTT-----PQIVEHLAGVPLA 98
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QISAG HS A + G +Y+WG N GQ+G L +P S E D+Q KV
Sbjct: 99 QISAGEAHSMALSMSGNIYSWGKNEFGQLG----LGHTESKDYP-SLIEGLDNQ--KVEF 151
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
VACG H+ L D L+ G ++ QL
Sbjct: 152 VACGGSHSALLTQDGLLFTFGAGKHGQL 179
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG T++ P I
Sbjct: 86 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGH--TESKDYPSLIEG 143
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
L V ++ GG HSA TQDG L+ +G GQ+G
Sbjct: 144 LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLG 180
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+ + + G +H L L+ +G F + N S L + S L ++QI
Sbjct: 1 MKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFES-------------ILQEKKIIQI 47
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G +HS A ++ G L+AWG N GQ+GV K P + + + ++
Sbjct: 48 TCGDYHSLALSKGGELFAWGQNLHGQLGVGRKF------PSTTTPQIVEHLAGVPLAQIS 101
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G H++AL +++ G NE+ QL +G
Sbjct: 102 AGEAHSMALSMSGNIYSWGKNEFGQLGLG 130
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ + V +ACG H LTQ+G++F++G G GQLG+ S T + P +
Sbjct: 138 PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS--TQNELRPCLVAE 195
Query: 80 LSGLGVVQISAG 91
L V QI+ G
Sbjct: 196 LVEYRVTQIACG 207
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q K++ + CG H+LAL L+ G N + QL +G + T + EH+ P
Sbjct: 40 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG---RKFPSTTTPQIVEHLAGVP 96
Query: 200 IVKLFAEHWNSARLSV 215
+ ++ A +S LS+
Sbjct: 97 LAQISAGEAHSMALSM 112
>gi|21741206|emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
Length = 256
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S VF P + + + IACG HCLA+T G V SWG GQLG + T+ ++
Sbjct: 115 SDVF-TPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGT--TEDSLL 171
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P++I++ G+ V I+AG H+AA T+DG LY WGW G +G+ + D +V P +S
Sbjct: 172 PQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV--PEKVSS 229
Query: 134 SEDF 137
E+
Sbjct: 230 VENM 233
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 10/148 (6%)
Query: 31 VTDIACGFDHCLALTQ-EGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+T + CG DH A ++ E V+SWG G G+LG+ +S +D P+ ++AL G+ + QI+
Sbjct: 78 ITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNS-SDV-FTPQPVKALQGIKIKQIA 135
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H A T G + +WG N GQ+G+ D ++ P + + F+ +K++ A
Sbjct: 136 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKI---QSFEGVCVKMI--AA 188
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ HT A+ +D L+G GW Y L +G
Sbjct: 189 GAEHTAAVTEDGDLYGWGWGRYGNLGLG 216
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV +SAG HS A L +WG GQ+G D +V P +S FD+ +
Sbjct: 24 VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLS---GFDAAAPGI 78
Query: 145 VDVACGSRHTLALC-DDNSLWGCGWNEYNQLSMG 177
V CG+ HT A D+ ++ GW ++ +L G
Sbjct: 79 TSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHG 112
>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
Length = 2770
Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 15/153 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+ G +H +AL +G + WG S GQLG ++ T ++ P ++ LSG V ISA
Sbjct: 472 VVSISAGSNHSMALKSDGTAWIWGGNSDGQLG--NNSTAQSLVPVQVPGLSG--VSAISA 527
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HS A DG ++AWG N+ GQ+G +V P+ S V+ G
Sbjct: 528 GNYHSMALKSDGTVWAWGRNSSGQLGNNSTTVSLV----PIQVLTGTTS-------VSAG 576
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+ H++AL D ++WG G NEY ++ + Q+
Sbjct: 577 TYHSMALKSDGAVWGWGNNEYKKIISNTNLDQL 609
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+ G H LAL +G ++WG+ + G LG S+ T + P ++ L+G V + A
Sbjct: 688 VEQISAGEGHSLALRSDGTAWAWGDNAYGMLGNNSTVTSS--IPVQVSGLTG--VSSVKA 743
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A DG ++AWG+N GQ+G +V P +S ED V+ ++ G
Sbjct: 744 GRLHSMALKSDGTVWAWGYNTEGQLGDGSTTQRLV--PVQVSGLED-------VIAISAG 794
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
H++ + D ++W G N QL
Sbjct: 795 DYHSMVIKSDGTVWAWGRNSNGQL 818
Score = 70.5 bits (171), Expect = 6e-10, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V+ I+ F H +AL +G +++WG +RGQLG ++ ++ P ++ GV ISA
Sbjct: 320 VSAISAAFGHSMALKSDGTLWTWGYNNRGQLG--NNSITQSLVPVQVLT----GVASISA 373
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +S A DG ++AWG N GQ G +D +V P+ S +I +
Sbjct: 374 GYDYSLAVKSDGTVWAWGRNYYGQFGNNSTIDSLV----PIQVSGLTGVTSISATS-SNN 428
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
H+LAL D ++WG G+N QL
Sbjct: 429 YSHSLALKSDGTVWGWGYNSTGQL 452
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 66/138 (47%), Gaps = 15/138 (10%)
Query: 38 FDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAA 97
+ H LAL +G V+ WG S GQLG S A ++AL GVV ISAG HS A
Sbjct: 429 YSHSLALKSDGTVWGWGYNSTGQLGNNS----ATQSLVPVQALGLTGVVSISAGSNHSMA 484
Query: 98 RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP-MSWSEDFDSQNIKVVDVACGSRHTLA 156
DG + WG N+ GQ+G +V P +S V ++ G+ H++A
Sbjct: 485 LKSDGTAWIWGGNSDGQLGNNSTAQSLVPVQVPGLS----------GVSAISAGNYHSMA 534
Query: 157 LCDDNSLWGCGWNEYNQL 174
L D ++W G N QL
Sbjct: 535 LKSDGTVWAWGRNSSGQL 552
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 15/158 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V+ I+ G H +AL +G V++WG S GQLG ++ T ++ P I+ L+G +SA
Sbjct: 522 VSAISAGNYHSMALKSDGTVWAWGRNSSGQLG--NNSTTVSLVP--IQVLTG--TTSVSA 575
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM-SWSEDFD------SQNIK 143
G +HS A DG ++ WG N ++ LD +V M ++ DF+ SQ IK
Sbjct: 576 GTYHSMALKSDGAVWGWGNNEYKKIISNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEIK 635
Query: 144 VVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMGCG 179
+ + G ++LAL D ++W G+ L G G
Sbjct: 636 SIATSSGGSYGYSLALKSDKTVWAWGYGGSGVLGNGTG 673
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 49/198 (24%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+ G H + + +G V++WG S GQLG ++ T ++ P ++ L+G+ + ISA
Sbjct: 788 VIAISAGDYHSMVIKSDGTVWAWGRNSNGQLG--NNSTTGSLVPVQVPGLTGVAL--ISA 843
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQ------------------VGVEGKLDLVVHDPH--- 129
G SAA DG AWG N GQ VGV G L +VV + H
Sbjct: 844 GTNTSAAVKSDGTALAWGSNTYGQLCDGSNIQRLIPVQVSEPVGV-GALSMVVANSHSLI 902
Query: 130 ----------------PMSWSEDFDSQN-------IKVVDVACGSRHTLALCDDNSLWGC 166
P+ + DS+ VV ++ G H++AL D ++WG
Sbjct: 903 LKLDGTVWGCGRNDYGPIGNNSITDSKVPVQTLGLAGVVSISAGLYHSMALKSDGTIWGW 962
Query: 167 GWNEYNQLSMGCGVSQVS 184
G+N Y QL S+++
Sbjct: 963 GYNGYGQLGDNSTTSRLA 980
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 77/184 (41%), Gaps = 47/184 (25%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V+ + G H +AL +G V++WG + GQLG T + P ++ L V+ ISA
Sbjct: 738 VSSVKAGRLHSMALKSDGTVWAWGYNTEGQLG--DGSTTQRLVPVQVSGLED--VIAISA 793
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVG---VEGKL---------------------DLVVH 126
G +HS DG ++AWG N+ GQ+G G L V
Sbjct: 794 GDYHSMVIKSDGTVWAWGRNSNGQLGNNSTTGSLVPVQVPGLTGVALISAGTNTSAAVKS 853
Query: 127 DPHPMSWSEDF-----DSQNIK--------------VVDVACGSRHTLALCDDNSLWGCG 167
D ++W + D NI+ + + + H+L L D ++WGCG
Sbjct: 854 DGTALAWGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCG 913
Query: 168 WNEY 171
N+Y
Sbjct: 914 RNDY 917
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ G+ H LAL +G V++WG G+LG T + P ++ L+ V ISA
Sbjct: 273 VVAGYYHNLALKSDGTVWAWGYNYYGRLG--DGSTINRIVPVQVSGLTE--VSAISAAFG 328
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A DG L+ WG+NN GQ+G +V P+ V ++ G +
Sbjct: 329 HSMALKSDGTLWTWGYNNRGQLGNNSITQSLV----PVQVLTG-------VASISAGYDY 377
Query: 154 TLALCDDNSLWGCGWNEYNQL 174
+LA+ D ++W G N Y Q
Sbjct: 378 SLAVKSDGTVWAWGRNYYGQF 398
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/149 (33%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQI 88
+ T + + LAL + V++WG G G LG +GT M +R L+G V QI
Sbjct: 637 IATSSGGSYGYSLALKSDKTVWAWGYGGSGVLG---NGTGEQMLVGYPVRDLTG--VEQI 691
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
SAG HS A DG +AWG N G +G V P+ S V V
Sbjct: 692 SAGEGHSLALRSDGTAWAWGDNAYGMLGNNS----TVTSSIPVQV-----SGLTGVSSVK 742
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G H++AL D ++W G+N QL G
Sbjct: 743 AGRLHSMALKSDGTVWAWGYNTEGQLGDG 771
Score = 44.7 bits (104), Expect = 0.030, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
Q+ AG +H+ A DG ++AWG+N G++G ++ +V P+ S + +
Sbjct: 272 QVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIV----PVQVS---GLTEVSAIS 324
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
A G H++AL D +LW G+N QL
Sbjct: 325 AAFG--HSMALKSDGTLWTWGYNNRGQL 350
>gi|27923092|gb|AAO27483.1| HERC2 [Homo sapiens]
Length = 409
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 90 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 147
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 148 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 201
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 202 -LQGKKVNRVACGSAHTLA 219
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 49 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 106
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G D H + Q KV+ +A
Sbjct: 107 ECGSQFSVALTKSGAVYTWGKGDYHRLGHG-------SDDHVRRPRQVQGLQGKKVIAIA 159
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 160 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 188
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 13/146 (8%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS--AGG 92
A G H +T G +++WG G G+LG+ S ++ ++P+ + AL G VV I+ +G
Sbjct: 1 AAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEALQGHRVVDIACGSGD 58
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVACGS 151
+ T D +++WG + G++G G V PM DS + VV V CGS
Sbjct: 59 AQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----IDSLTGLGVVKVECGS 110
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ ++AL +++ G +Y++L G
Sbjct: 111 QFSVALTKSGAVYTWGKGDYHRLGHG 136
>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
Length = 371
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 71/129 (55%), Gaps = 8/129 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V CG D + T+ G VF++G+ GQLG A M P+E+ L+G V I+A
Sbjct: 184 VKAAECGKDFSVIATESGQVFTFGSDDYGQLGLGQFARYA-MTPKEVAVLAGKNVRSIAA 242
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +H+AA T DG LY WG+ GQ+G +D+ + P+ E QN++V VACG
Sbjct: 243 GDYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDVSL----PVLVRE---LQNLRVQSVACG 295
Query: 151 SRHTLALCD 159
HT+A+ D
Sbjct: 296 CDHTVAVID 304
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
VT ++ G H A+ G VF WG G GQLG ++ + +P + V +S
Sbjct: 81 VTCVSAGHRHAAAIVGGGDVFVWGRGFSGQLGLGTNKSHFTPQPLSFP----MPVKALSC 136
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG HS T+DG LYA G GQ+G + ++ P+ S +K + CG
Sbjct: 137 GGSHSLFITEDGRLYATGRGKEGQLGTGSQESVL----SPVEVQMPEGSGRVKAAE--CG 190
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ + ++ G ++Y QL +G
Sbjct: 191 KDFSVIATESGQVFTFGSDDYGQLGLG 217
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
GV +SAG H+AA G ++ WG GQ+G+ + P P+S+ +
Sbjct: 80 GVTCVSAGHRHAAAIVGGGDVFVWGRGFSGQLGL--GTNKSHFTPQPLSFP-------MP 130
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV--PEHVKNCPIV 201
V ++CG H+L + +D L+ G + QL G SQ SV++ + V PE
Sbjct: 131 VKALSCGGSHSLFITEDGRLYATGRGKEGQLGTG---SQESVLSPVEVQMPE-------- 179
Query: 202 KLFAEHWNSARLSVPEHAKDSSIVKLFAGH 231
S R+ E KD S++ +G
Sbjct: 180 -------GSGRVKAAECGKDFSVIATESGQ 202
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 20/138 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA G H A+T +G +++WG G GQLG ++ D ++ P +R L L V ++
Sbjct: 237 VRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNGNT-VDVSL-PVLVRELQNLRVQSVAC 294
Query: 91 GGWHSAARTQDGF-----LYAWGWNNGGQV-----GVEGKLDL--VVHDPHPMSWSEDFD 138
G H+ A G L + G+V G EG+L +V P +
Sbjct: 295 GCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMGRGREGQLGRGDIVESPAV------YR 348
Query: 139 SQNIKVVDVACGSRHTLA 156
S ++V VACG+ HTLA
Sbjct: 349 SVPLQVQQVACGTSHTLA 366
>gi|66827585|ref|XP_647147.1| hypothetical protein DDB_G0267586 [Dictyostelium discoideum AX4]
gi|60475311|gb|EAL73246.1| hypothetical protein DDB_G0267586 [Dictyostelium discoideum AX4]
Length = 462
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQIS 89
+ +++ G H L LT++G V+S+G GS QLG+ G + N EP EI LS ++++
Sbjct: 144 IKNVSGGRRHTLILTKDGKVYSYGIGSEYQLGH---GDNQNRSEPTEIEQLSKYAIIKVV 200
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
+G HS A + DG LY+WG++N Q G +D + P + + DF+ +N V
Sbjct: 201 SGWGHSIALSNDGKLYSWGFSNDSQTGHGFLIDNPIKSPKLI--ASDFNFKN-----VFS 253
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
GS + + D L G NE+ QL G ++Q
Sbjct: 254 GSDFVITITDKGELITFGSNEFGQLGNGTIINQ 286
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI------RALSGLGVVQ 87
I+CGF HCL L +G +F++G GQLG S ++ N I +G +
Sbjct: 326 ISCGFSHCLILNDDGELFTFGWNGNGQLGIGRSNSNNNNTYESIPIKLDSSLFNGEKIEM 385
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM-----SWSEDFDSQNI 142
+SAG HS A T+ G LY WG +N G++G G + +++P + S + F +
Sbjct: 386 VSAGRNHSVALTESGRLYLWGNSNHGKLG-NGTVSGNIYEPTELFDFDESVPQSFPLEFQ 444
Query: 143 KVVDVACGSRHTL 155
KV++++ G HT+
Sbjct: 445 KVLNISTGFDHTI 457
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 92/221 (41%), Gaps = 27/221 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ ++ + + G+ H +AL+ +G ++SWG + Q G+ + P+ I
Sbjct: 185 PTEIEQLSKYAIIKVVSGWGHSIALSNDGKLYSWGFSNDSQTGHGFLIDNPIKSPKLIA- 243
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG------VEGKLDLVVHDPHPMSW 133
S + +G T G L +G N GQ+G E ++++ +
Sbjct: 244 -SDFNFKNVFSGSDFVITITDKGELITFGSNEFGQLGNGTIINQEFPINIINNHFGGGGG 302
Query: 134 SEDFDSQNIKVVD----------VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+S+ K+++ ++CG H L L DD L+ GWN QL +G S
Sbjct: 303 GGGANSKFNKIIESAGKGKFDKRISCGFSHCLILNDDGELFTFGWNGNGQLGIGRSNSN- 361
Query: 184 SVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSI 224
+ T S+P +KL + +N ++ + ++ S+
Sbjct: 362 NNNTYESIP--------IKLDSSLFNGEKIEMVSAGRNHSV 394
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ--------NIKVVDVACGSRHTL 155
LY+WG N G++G +L P+ +S + ++Q NI + D+ CG HT+
Sbjct: 40 LYSWGCNKDGKLGNNNELVDCEAFPNRISSFQINNNQIIDNQSFSNIGIKDIECGHYHTM 99
Query: 156 ALCDDNSLWGCGWNEY 171
+ +++L+ CGW +
Sbjct: 100 IIDKNDNLYQCGWTSF 115
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 16/141 (11%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREI-------------RALSGLGVVQISAGGWHSA 96
++SWG G+LG + D P I ++ S +G+ I G +H+
Sbjct: 40 LYSWGCNKDGKLGNNNELVDCEAFPNRISSFQINNNQIIDNQSFSNIGIKDIECGHYHTM 99
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
++ LY GW VG+ + P + S + K+ +V+ G RHTL
Sbjct: 100 IIDKNDNLYQCGWT--SFVGINNLTKNNKNLI-PTIINPSSSSSSFKIKNVSGGRRHTLI 156
Query: 157 LCDDNSLWGCGWNEYNQLSMG 177
L D ++ G QL G
Sbjct: 157 LTKDGKVYSYGIGSEYQLGHG 177
>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
KIAA1239-like [Oreochromis niloticus]
Length = 2697
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG DHCLA++ G VFSWG G GQLG + + ++ P ++ + ++Q++
Sbjct: 1763 VVAMACGQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSH-RPSKVPIPLPIPIIQVAC 1821
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A T+ G +++WG N+ GQ+G+ GK V H P + + V +A G
Sbjct: 1822 GNSHSLALTKGGDVFSWGLNSHGQLGL-GKEVPVQHTPVIIC-----ALAGVAVTQIAAG 1875
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
H+L L + ++ CG N+ QL GV++V R ++
Sbjct: 1876 GTHSLFLTLADLVYCCGANKCGQL----GVNRVDEKGRFNI 1912
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H PS++ L + + +ACG H LALT+ G VFSWG S GQLG P I
Sbjct: 1803 HRPSKVPIPLPIPIIQVACGNSHSLALTKGGDVFSWGLNSHGQLGL-GKEVPVQHTPVII 1861
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-----EGKLDL-VVHDPHPM 131
AL+G+ V QI+AGG HS T +Y G N GQ+GV +G+ ++ +V P+
Sbjct: 1862 CALAGVAVTQIAAGGTHSLFLTLADLVYCCGANKCGQLGVNRVDEKGRFNICMVPALRPL 1921
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
S V ++CG H+ L D ++ G QL ++V
Sbjct: 1922 S-----------VSFISCGESHSAVLTKDGKVYTFGDGSQGQLGHSTSANEV 1962
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 18/152 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG-VVQI 88
V+T I CG H L L +G V S G+ S+GQL G + I + LG VV +
Sbjct: 1712 VITKICCGDRHTLFLNADGNVLSCGHNSQGQL-----GRQKKKNGKIIAQVEALGSVVAM 1766
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW---SEDFDSQNIKVV 145
+ G H A + G +++WG GQ+G+ P P S S+ I ++
Sbjct: 1767 ACGQDHCLAVSASGHVFSWGAGEDGQLGLL---------PTPSSSHRPSKVPIPLPIPII 1817
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
VACG+ H+LAL ++ G N + QL +G
Sbjct: 1818 QVACGNSHSLALTKGGDVFSWGLNSHGQLGLG 1849
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 317
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSTHTSA 323
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +L+G
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGK 98
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 152
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 201
>gi|356568831|ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Glycine max]
Length = 474
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 23 MDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRAL 80
+D +LV + ++CG H ++ +G V++WG G+ GQLG+ S D + PR + L
Sbjct: 219 LDEAPELVKIAKVSCGEYHTAVISDKGEVYTWGLGNMGQLGHSSLQYGDKELLPRRVVTL 278
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDF 137
G+ + ++ GG H+ + TQ G LYAWG GQ+G+ G V +D F
Sbjct: 279 DGIFIKDVACGGVHTCSVTQGGALYAWGGGRSGQLGLGPQTGLFSCVANDSQTF-----F 333
Query: 138 DSQNIKVVD-----VACGSRHTLALCDDNSLWGCGWNEYNQ 173
+ + VV VACG HTL D + G G+N Y Q
Sbjct: 334 RNIPVLVVPKGVQLVACGYSHTLISMSDGRIHGWGYNNYGQ 374
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSG------TDAN 71
+P R+ + + D+ACG H ++TQ G +++WG G GQLG P +G D+
Sbjct: 271 LPRRVVTLDGIFIKDVACGGVHTCSVTQGGALYAWGGGRSGQLGLGPQTGLFSCVANDSQ 330
Query: 72 MEPREIRALSGLGVVQISAGGW-HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
R I L VQ+ A G+ H+ DG ++ WG+NN GQ E K + P P
Sbjct: 331 TFFRNIPVLVVPKGVQLVACGYSHTLISMSDGRIHGWGYNNYGQAANE-KCTYAWY-PSP 388
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ W +V +A G H+ L D SL
Sbjct: 389 IDWCVG------EVRKLAAGGGHSAVLTDAYSL 415
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAG 91
D+ACG +H A+ +G +F+WG GQLG GT+ + P +++ L V +S G
Sbjct: 64 DVACGREHTAAIASDGSLFTWGANDFGQLG---DGTEERRKLPEKVKQLESEFVKSVSCG 120
Query: 92 GWHSAARTQ----DGF-----LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
SA + DG L+ WG N G + P + F I
Sbjct: 121 AHCSACIAEPHENDGTISTRRLWVWGQNQGSNL--------------PRLFWGAFKPNTI 166
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC------GVSQVSVMTRL--SVPEH 194
+ +V+CG+ H +AL ++ L G+NEY QL G G +S + PE
Sbjct: 167 -IREVSCGAVHVVALSEEGLLQAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPEL 225
Query: 195 VKNCPIVKLFAEHWNSARLS 214
VK I K+ +++A +S
Sbjct: 226 VK---IAKVSCGEYHTAVIS 242
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 23/163 (14%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-------------YPSSGTDANMEP 74
+ ++ +++CG H +AL++EG++ +WG GQLG S + P
Sbjct: 164 NTIIREVSCGAVHVVALSEEGLLQAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAP 223
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
++ + ++S G +H+A + G +Y WG N GQ+G L D +
Sbjct: 224 ELVK------IAKVSCGEYHTAVISDKGEVYTWGLGNMGQLG---HSSLQYGDKELLP-R 273
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I + DVACG HT ++ +L+ G QL +G
Sbjct: 274 RVVTLDGIFIKDVACGGVHTCSVTQGGALYAWGGGRSGQLGLG 316
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 104 LYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y WG+N GQ G +GK D L + P N + +DVACG HT A+ D S
Sbjct: 21 IYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNARWLDVACGREHTAAIASDGS 80
Query: 163 LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
L+ G N++ QL G R +PE VK
Sbjct: 81 LFTWGANDFGQLGDG-------TEERRKLPEKVKQ 108
>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
Length = 1263
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ I CG H LAL++ G +F+WG GQLG T P+ + LSG+ +VQISA
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPT-PQLVEHLSGVPLVQISA 437
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-----QNIKVV 145
G HS A + G +Y+WG N+ GQ+G+ G + EDF S N KV
Sbjct: 438 GKAHSMALSMSGNIYSWGRNDLGQLGL-GHTN-----------GEDFPSLIEALDNQKVE 485
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ACG HT L D ++ G +Y QL G +Q + RL
Sbjct: 486 FLACGGSHTALLTKDGLVFTFGAGKYGQL--GHNSTQNELRPRL 527
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
PS ++ + V +ACG H LT++G+VF++G G GQLG+ S T + PR +
Sbjct: 472 FPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNS--TQNELRPRLVT 529
Query: 79 ALSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED- 136
L+G V Q++ G WH+ A D G ++++G GQ+G G + ++ P + +E+
Sbjct: 530 ELAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEEL 589
Query: 137 -FDSQN--IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
F+S+ +++ +A G++ L LW N Y L
Sbjct: 590 KFESRTSEKELIMIAGGNQSIL-------LWMGKKNPYVNL 623
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG T+ P I A
Sbjct: 421 PQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGL--GHTNGEDFPSLIEA 478
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG H+A T+DG ++ +G GQ+G ++ P +E +
Sbjct: 479 LDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNS----TQNELRPRLVTELAGN 534
Query: 140 QNIKVVDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMGCGVSQ-VSVMTRLSVPEHVK 196
+V VACG HTLA D ++ G + QL G +Q + + +L E +K
Sbjct: 535 ---RVTQVACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELK 590
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP---EHVK 196
Q ++ + CG H+LAL L+ G N + QL +G + T + P EH+
Sbjct: 375 QEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG------RLFTSIPTPQLVEHLS 428
Query: 197 NCPIVKLFAEHWNSARLSV 215
P+V++ A +S LS+
Sbjct: 429 GVPLVQISAGKAHSMALSM 447
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 317
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSTHTSA 323
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +L+G
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGK 98
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 152
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 201
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 317
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSTHTSA 323
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +L+G
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGK 98
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 152
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 201
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
>gi|374579969|ref|ZP_09653063.1| putative repeat protein [Desulfosporosinus youngiae DSM 17734]
gi|374416051|gb|EHQ88486.1| putative repeat protein [Desulfosporosinus youngiae DSM 17734]
Length = 4202
Score = 80.1 bits (196), Expect = 7e-13, Method: Composition-based stats.
Identities = 60/164 (36%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 12 MLSQVFHMPSRMDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
+LS +PS + V + IA G H LALT G+V++WG+GSRGQLG S
Sbjct: 1549 VLSSTVTLPSWESSLGEGVYIVQIAAGNSHSLALTNTGVVYAWGSGSRGQLGNGSITLQT 1608
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
A+ GV ISAG HS A +DG +YAWG + G++G E +D P
Sbjct: 1609 TPVKVSDGAMGNRGVTAISAGKEHSLA-LKDGQVYAWGAQSDGRLGNE--VDSPTEQTTP 1665
Query: 131 MSWSEDF----DSQNIKVVDVACGSRHTLALCDDNSL-WGCGWN 169
+ S+ D N V+ ++ GS+H+LAL D WG N
Sbjct: 1666 VKVSDGVGTGQDFTNEGVMAISAGSKHSLALKDGQVYAWGAQLN 1709
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR----ALSGLGVV 86
+ IA G H +ALT G+V++WG G+ G+LG S T A+ P ++ + GV
Sbjct: 123 IVQIAGGTYHSMALTNTGVVYAWGQGTYGELGRGS--TSASYRPVKVSDNGDIFTNSGVT 180
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
ISAG + S A +DG +YAWG+ G++G
Sbjct: 181 AISAGEYTSFA-LKDGVVYAWGYGQNGRLG 209
Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VV 86
VT IA G +H LAL ++G V++WG G LG SSG D+ P ++ +G V
Sbjct: 1794 VTAIAAGANHSLAL-KDGQVYAWGYFGSGLLGNGSSGHDSTNRPVKVSG-GAMGTNENVT 1851
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
I+A HS A +DG +Y WG +GG++G G + + P+ S N V+
Sbjct: 1852 AIAAVREHSLA-LKDGRVYIWGEGSGGRLG-NGSYE---NQATPVEVSAG-AMGNTGVIA 1905
Query: 147 VACGSRHTLALCDDNSL-WGCG 167
+A G H+LAL DD WG G
Sbjct: 1906 IAAGGFHSLALKDDQVYAWGGG 1927
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
VT IA +H LAL ++G V+ WG GS G+LG S A A+ GV+ I+A
Sbjct: 1850 VTAIAAVREHSLAL-KDGRVYIWGEGSGGRLGNGSYENQATPVEVSAGAMGNTGVIAIAA 1908
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEG 119
GG+HS A +D +YAWG + GQ+G G
Sbjct: 1909 GGFHSLA-LKDDQVYAWGGGSDGQLGDGG 1936
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP-----REIRAL 80
F + V I+ G H LAL ++G V++WG G LG + + P E
Sbjct: 1678 FTNEGVMAISAGSKHSLAL-KDGQVYAWGAQLNGLLGNAVTSSTGQTTPVKVSDGEYSDF 1736
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ 140
+ GV I+AG HS A +DG +YAWG+N G+VG + ++ P + ++
Sbjct: 1737 TNTGVTTIAAGDEHSLA-IKDGQVYAWGYNGFGKVGTDYS---IISTPGKVFAGAMGTNE 1792
Query: 141 NIKVVDVACGSRHTLALCDDNSL-WG 165
N V +A G+ H+LAL D WG
Sbjct: 1793 N--VTAIAAGANHSLALKDGQVYAWG 1816
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
H LAL + G+V++WGNG G+LG S+ + A+ GV ISAG HS A
Sbjct: 379 HSLAL-KGGVVYAWGNGLLGKLGNNSTANQSIPVKVSDGAMVNSGVTAISAGILHSLA-L 436
Query: 100 QDGFLYAWGWNNGGQVGVEGKLD 122
+DG +YAWG G +G G D
Sbjct: 437 KDGAVYAWGQGLIGALGDNGSTD 459
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
VT I+ G H L L + G+V++WG+GS G+LG S+ + A+ GV I+A
Sbjct: 316 VTAISAGNSHSLVL-KGGVVYAWGDGSDGRLGNGSTVNQSTPVKVSDGAMVNSGVTAIAA 374
Query: 91 -GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G HS A + G +YAWG G++G + + P+ S D N V ++
Sbjct: 375 VVGSHSLA-LKGGVVYAWGNGLLGKLGNNSTANQSI----PVKVS-DGAMVNSGVTAISA 428
Query: 150 GSRHTLALCDDNSL-WGCG 167
G H+LAL D WG G
Sbjct: 429 GILHSLALKDGAVYAWGQG 447
Score = 40.4 bits (93), Expect = 0.64, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-Q 140
G+ +VQI+ G +HS A T G +YAWG G++G G P+ S++ D
Sbjct: 120 GVKIVQIAGGTYHSMALTNTGVVYAWGQGTYGELG-RGSTSASY---RPVKVSDNGDIFT 175
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
N V ++ G + AL D ++ G+ + +L G +Q+
Sbjct: 176 NSGVTAISAGEYTSFAL-KDGVVYAWGYGQNGRLGTGSTDNQL 217
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 130 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 187 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 240 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 293
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 122
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 123 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 178
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 179 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 216
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 170 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 228 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 284
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 285 -----RIIEIAACHSTHTSA 299
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +L+G
Sbjct: 17 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGK 74
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 75 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 128
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 129 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 177
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 224 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 280
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 281 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 318
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 159 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTINQPIPRRVTGCLQNKVVVTI 215
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 216 ACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 268
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 269 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 322
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC----GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+D L IAC H + T EG VF+WG+ + QLG + T+ + P
Sbjct: 94 PRRLD---SLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPC 148
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I LS V++++ G +HS T DG ++AWG+NN GQVG ++ P P +
Sbjct: 149 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TINQPIPRRVT 204
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 205 GCL--QNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLG 245
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 199 IPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 256
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 257 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 313
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 314 -----RIIEIAACHSTHTSA 328
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +LSG
Sbjct: 46 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGK 103
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 104 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 157
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G ++Q +P V C
Sbjct: 158 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQ-------PIPRRVTGC 206
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 253 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 309
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 310 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 347
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 80.1 bits (196), Expect = 7e-13, Method: Composition-based stats.
Identities = 56/160 (35%), Positives = 89/160 (55%), Gaps = 14/160 (8%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P R+ +L+ VV IA G+ H +AL +G V+ WG+ S G LG S+ + + P ++
Sbjct: 283 YIPVRI-RWLNKVVA-IAAGYRHSIALKDDGTVWVWGHNSYGVLG--SNVGEHSFLPVQV 338
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L VV ++AG HS A T++G ++AWG N GQ+G E ++ P+ + W ++
Sbjct: 339 KGLKN--VVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENN-SFSLNLPYKVKWLDN- 394
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
VV +A G HTLA+ D ++W G N QL G
Sbjct: 395 ------VVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNG 428
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 77/149 (51%), Gaps = 13/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ G H LAL ++G V+SWG G+LG + P ++ LS V+ ISA
Sbjct: 194 VVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD--VIAISA 251
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG+HS A +DG ++ WG GG + GK+D + P + W KVV +A G
Sbjct: 252 GGFHSIALNKDGAVWIWG---GGIIEKNGKID-NSYIPVRIRWLN-------KVVAIAAG 300
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
RH++AL DD ++W G N Y L G
Sbjct: 301 YRHSIALKDDGTVWVWGHNSYGVLGSNVG 329
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 17/147 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +A G H +ALT+ G +++WGN + GQLG ++ N+ P +++ L VV I+A
Sbjct: 344 VVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNL-PYKVKWLDN--VVAIAA 400
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A +DG +++WG NN GQ+G + + S+ K V V G
Sbjct: 401 GGSHTLAIKRDGTVWSWGANNKGQLG---------NGTYKSSYIPTCVKGLNKAVLVEAG 451
Query: 151 SRHTLALCDDNSLWGCG-----WNEYN 172
S+H+LA+ D ++W G W+E N
Sbjct: 452 SQHSLAVDKDGTVWVWGFIESVWSEKN 478
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVVQIS 89
V +A G H LAL ++G V+SWG + GQLG +GT + + P ++ L+ VV I+
Sbjct: 596 VVKVAAGKYHSLALKKDGTVWSWGYNAYGQLG---NGTRETSFVPVRVKGLNN--VVAIA 650
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG +HS A +DG ++ WG N GQ+G + P+ E D+ VV +A
Sbjct: 651 AGDYHSMALKKDGTVWVWGSNIRGQLGRRN----IEFSTVPLK-VEKLDN----VVAIAA 701
Query: 150 GSRHTLALCDDNSLWGCG 167
G H++AL D ++W G
Sbjct: 702 GDTHSVALKKDGTVWVWG 719
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 22/148 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA G+ H LA+ +G V+SWG+ + L + + +P +I+ LSG VV+++A
Sbjct: 547 VRSIAAGYFHSLAVRTDGTVWSWGDTN---LDNKEKYLNFSEKPVKIKGLSG--VVKVAA 601
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK----VVD 146
G +HS A +DG +++WG+N GQ+G + F +K VV
Sbjct: 602 GKYHSLALKKDGTVWSWGYNAYGQLGNGTR-------------ETSFVPVRVKGLNNVVA 648
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
+A G H++AL D ++W G N QL
Sbjct: 649 IAAGDYHSMALKKDGTVWVWGSNIRGQL 676
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 15/139 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVVQISAGGWHSAAR 98
H LA+ +G V++WG GQLG +GT + P ++ L VV +SAG +HS A
Sbjct: 53 HTLAIKDDGTVWAWGYNGFGQLG---NGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLAL 107
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
+DG ++ WG N GQ K D+ P+ E +NI V +A G +LA+
Sbjct: 108 KKDGSVWIWGHTNYGQ----RKSDVYRDFTTPVKVKE---LKNI--VAIAAGWDFSLAVG 158
Query: 159 DDNSLWGCGWNEYNQLSMG 177
D S+W G N + +L +G
Sbjct: 159 SDGSVWAWGINNHGELGIG 177
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP--REIRALSGLGVVQI 88
+T+IA G D+ L L ++G ++ GN Y TD+++ + IR + V I
Sbjct: 496 ITEIAGGLDYILVLRKDGNIWGCGNDF-----YFRKFTDSSVSSVTKLIRLDNIKNVRSI 550
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK----V 144
+AG +HS A DG +++WG N ++ K + P+ IK V
Sbjct: 551 AAGYFHSLAVRTDGTVWSWGDTN-----LDNKEKYLNFSEKPV---------KIKGLSGV 596
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V VA G H+LAL D ++W G+N Y QL G
Sbjct: 597 VKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNG 629
Score = 44.7 bits (104), Expect = 0.038, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 16/125 (12%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+ AG H+ A DG ++AWG+N GQ+G D + P + +D V
Sbjct: 44 VISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCI--PVRVKGLKD-------V 94
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLF 204
V V+ G+ H+LAL D S+W G Y Q + V + P VK +
Sbjct: 95 VAVSAGTFHSLALKKDGSVWIWGHTNYGQ-------RKSDVYRDFTTPVKVKELKNIVAI 147
Query: 205 AEHWN 209
A W+
Sbjct: 148 AAGWD 152
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S++ +N KV+ GS HTLA+ DD ++W G+N + QL G
Sbjct: 34 SKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNG 77
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 159 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 215
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 216 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 268
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 269 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 322
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 151
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 152 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 207
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 208 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 245
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 199 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 256
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 257 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 313
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 314 -----RIIEIAACHSTHTSA 328
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 253 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 309
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 310 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 347
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +L+G
Sbjct: 46 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGK 103
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 104 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 157
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 158 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 206
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 130 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 187 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 240 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 293
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 122
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 123 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 178
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 179 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 216
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 170 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 228 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 284
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 285 -----RIIEIAACHSTHTSA 299
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 224 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 280
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 281 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 318
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +L+G
Sbjct: 17 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVRSTIEPRRLDSLNGK 74
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 75 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 128
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 129 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 177
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 159 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 215
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 216 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 268
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 269 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 322
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 151
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 152 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 207
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 208 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 245
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 199 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 256
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 257 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 313
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 314 -----RIIEIAACHSTHTSA 328
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 253 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 309
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 310 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 347
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG-GWHSAA 97
+ L T +F G G LG + +EPR + +L+G + +S G G H
Sbjct: 61 NEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVL 118
Query: 98 RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
T +G ++ WG N Q+G G + H P S + N +V++VACGS H+L L
Sbjct: 119 ATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NKQVIEVACGSYHSLVL 172
Query: 158 CDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
D ++ G+N Q+ G V+Q +P V C
Sbjct: 173 TSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 206
>gi|408500677|ref|YP_006864596.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465501|gb|AFU71030.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1082
Score = 80.1 bits (196), Expect = 7e-13, Method: Composition-based stats.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR------EIRALS 81
D ++ G+ H LAL +G V++WG+ + QLG +SG + + R +
Sbjct: 620 DFTYVQVSAGYRHSLALGSDGYVYAWGDNTYAQLGNNTSGGYSTVPVRVCDPSTHSNVNT 679
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDP-HPMSWSE 135
GL +Q+ AGG HS A ++G ++AWG N GQ+G + V DP HP
Sbjct: 680 GLKAIQVDAGGEHSLAIDKEGNVWAWGRNRNGQLGNGTSSSYSSAPVRVCDPEHPTD--- 736
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
S+ + + VA G H+LA+ D W G+N Y QL
Sbjct: 737 --ASKGLVALKVAGGGAHSLAIDRDGDTWAWGFNSYGQL 773
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 24/183 (13%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR---------A 79
L + G +H LA+ +EG V++WG GQLG +GT ++ +R A
Sbjct: 681 LKAIQVDAGGEHSLAIDKEGNVWAWGRNRNGQLG---NGTSSSYSSAPVRVCDPEHPTDA 737
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKLD------LVVHDPHPM 131
GL ++++ GG HS A +DG +AWG+N+ GQ+G V D + V DP+
Sbjct: 738 SKGLVALKVAGGGAHSLAIDRDGDTWAWGFNSYGQLGNNVTSGFDGANPVPVRVRDPN-- 795
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
+ D S+N+K V ++ G H++A+ + W GWN + +L + R+
Sbjct: 796 --NPDDTSKNLKSVQISAGFEHSIAIDAQGNTWSWGWNYWGELGQNTTNEDILSPARVYN 853
Query: 192 PEH 194
P++
Sbjct: 854 PDN 856
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV----VQISAGGWHSAA 97
LA+ +G ++WG+ GQLG + T P +++ +G+ VQ+SAG HS A
Sbjct: 578 LAVGSDGNAYAWGDNRSGQLG--NGMTTQQNTPVQVKKPAGVSADFTYVQVSAGYRHSLA 635
Query: 98 RTQDGFLYAWGWNNGGQVG--VEGKLDLV---VHDPHPMSWSEDFDSQNIKVVDVACGSR 152
DG++YAWG N Q+G G V V DP S + +K + V G
Sbjct: 636 LGSDGYVYAWGDNTYAQLGNNTSGGYSTVPVRVCDPSTHSNV----NTGLKAIQVDAGGE 691
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
H+LA+ + ++W G N QL G S S R+ PEH
Sbjct: 692 HSLAIDKEGNVWAWGRNRNGQLGNGTSSSYSSAPVRVCDPEH 733
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRALSG-------L 83
+ ++ G+D LA+ GI +SWG + GQLGY + + + +P ++R + L
Sbjct: 864 SQVSAGYDTSLAVDINGIAWSWGRNTYGQLGYTNYDDSRGHNQPAKVRNPASPNNTDLSL 923
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+SAG WHS A +DG+ Y WG+N GQ+G
Sbjct: 924 DSTLVSAGNWHSLAIGKDGYTYGWGYNKYGQLG 956
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV-- 85
+L I+ GF+H +A+ +G +SWG G+LG ++ D + P + +
Sbjct: 803 NLKSVQISAGFEHSIAIDAQGNTWSWGWNYWGELGQNTTNEDI-LSPARVYNPDNPSIPF 861
Query: 86 --VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
Q+SAG S A +G ++WG N GQ+G D H+ P N
Sbjct: 862 KASQVSAGYDTSLAVDINGIAWSWGRNTYGQLGYTNYDDSRGHN-QPAKVRNPASPNNTD 920
Query: 144 V----VDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ V+ G+ H+LA+ D +G G+N+Y QL
Sbjct: 921 LSLDSTLVSAGNWHSLAIGKDGYTYGWGYNKYGQL 955
Score = 43.9 bits (102), Expect = 0.054, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Query: 95 SAARTQDGFLYAWGWNNGGQVG--VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
S A DG YAWG N GQ+G + + + V P S DF V V+ G R
Sbjct: 577 SLAVGSDGNAYAWGDNRSGQLGNGMTTQQNTPVQVKKPAGVSADF-----TYVQVSAGYR 631
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
H+LAL D ++ G N Y QL +V R+ P N
Sbjct: 632 HSLALGSDGYVYAWGDNTYAQLGNNTSGGYSTVPVRVCDPSTHSN 676
>gi|320163137|gb|EFW40036.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 2579
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR---EIRALSGLGVVQISA 90
IACG H + +G V++WG+ GQLG+ P E ++ + IS
Sbjct: 1478 IACGSTHA-SFVYDGDVYTWGSSHNGQLGHGDMIDGVGSLPPARCETLHMNSNRIASISC 1536
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+ A T +G +YAWG N GQ+G+ G D P +S E +++ VACG
Sbjct: 1537 GAEHTVAITNEGMVYAWGANGYGQLGL-GDTDKRT-KPTMLSRLEPVVMHESRIIQVACG 1594
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
HTL L D +W CGW QL +G + + +P HVK
Sbjct: 1595 YFHTLFLTDKGEVWACGWGAQGQLGVGSTSNAL-------LPVHVK 1633
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL-----GV 85
+ I+CG +H +A+T EG+V++WG GQLG TD +P + L + +
Sbjct: 1531 IASISCGAEHTVAITNEGMVYAWGANGYGQLGL--GDTDKRTKPTMLSRLEPVVMHESRI 1588
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD--LVVHDPHPMSWSEDFDSQNIK 143
+Q++ G +H+ T G ++A GW GQ+GV + L VH + D++ I
Sbjct: 1589 IQVACGYFHTLFLTDKGEVWACGWGAQGQLGVGSTSNALLPVH-------VKILDNKGI- 1640
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V +A G H++ L + +L+ G N Y QL
Sbjct: 1641 -VGLAAGFCHSVVLTESGTLYAFGGNSYGQL 1670
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG+ H L LT +G V++ G G++GQLG S T + P ++ L G+V ++A
Sbjct: 1588 IIQVACGYFHTLFLTDKGEVWACGWGAQGQLGVGS--TSNALLPVHVKILDNKGIVGLAA 1645
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS T+ G LYA+G N+ GQ+G G + L P P++ D + V ++CG
Sbjct: 1646 GFCHSVVLTESGTLYAFGGNSYGQLGAAGTV-LTSLTPFPVAGLAD-----VHVTWISCG 1699
Query: 151 SRHT 154
+ T
Sbjct: 1700 TFQT 1703
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL-GVVQIS 89
V + CG H L LT G V+ G GQLG S + P+ I A + ++ ++
Sbjct: 1845 VVQVVCGDWHMLMLTSRGSVYCLGANEHGQLGINSLRPRQEI-PKRIGAFDHVPPIIALA 1903
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
AG SA G + WG + GQ+G E
Sbjct: 1904 AGEDFSACVDAAGQTWIWGRADNGQLGQE 1932
>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Felis catus]
Length = 1143
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 83/164 (50%), Gaps = 20/164 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ I CG H LAL++ G +F+WG GQLG S + P+ + LSG+ +VQISA
Sbjct: 258 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAI-PQIVENLSGIPLVQISA 316
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-----QNIKVV 145
G HS A + G +Y+WG N+ GQ+G+ G D +DF S N KV
Sbjct: 317 GKAHSMALSMSGNIYSWGRNDFGQLGL-GHTD-----------GKDFPSLIEALDNQKVE 364
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ACG HT L D ++ G ++ QL G +Q + RL
Sbjct: 365 FLACGGSHTALLTKDGLVFTFGAGKHGQL--GHNSTQNELRPRL 406
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 14/161 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
PS ++ + V +ACG H LT++G+VF++G G GQLG+ S T + PR +
Sbjct: 351 FPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNS--TQNELRPRLVT 408
Query: 79 ALSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED- 136
L+G V QI+ G H+ A D G ++++G GQ+G G + ++ P + +E+
Sbjct: 409 ELAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEEL 468
Query: 137 -FDSQ--NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
F+S+ +++ +A G++ L LW N Y L
Sbjct: 469 TFESRASEKELIMIAGGNQSIL-------LWMGKKNSYVNL 502
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ + + I+ G H +AL+ G ++SWG GQLG TD P I
Sbjct: 299 IPQIVENLSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFGQLGL--GHTDGKDFPSLIE 356
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL V ++ GG H+A T+DG ++ +G GQ+G ++ P +E
Sbjct: 357 ALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNS----TQNELRPRLVTELAG 412
Query: 139 SQNIKVVDVACGSRHTLALCDD 160
+ +V +ACG +HTLA D
Sbjct: 413 N---RVTQIACGRQHTLAYVSD 431
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q ++ + CG H+LAL L+ G N + QL +G SQ + + + E++ P
Sbjct: 254 QEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIG---SQFASIAIPQIVENLSGIP 310
Query: 200 IVKLFAEHWNSARLSV 215
+V++ A +S LS+
Sbjct: 311 LVQISAGKAHSMALSM 326
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 130 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 187 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 240 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 293
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 122
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 123 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 178
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 179 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 216
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 170 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 228 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 284
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 285 -----RIIEIAACHSTHTSA 299
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 224 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 280
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 281 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 318
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +L+G
Sbjct: 17 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGK 74
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 75 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 128
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 129 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 177
>gi|342181804|emb|CCC91283.1| putative regulator of chromosome condensation [Trypanosoma
congolense IL3000]
Length = 1149
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G HCLA+T G V+SWG G+LG+ + + M R I ALS +V S
Sbjct: 553 VVALRAGPFHCLAITSSGAVYSWGMERNGRLGHGDNKNEERM--RVIDALSSHVIVDASC 610
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +H+A T+ G +Y +G N+ GQ+G++G+ ++ + P+ + + V+CG
Sbjct: 611 GCFHTAVLTKHGQVYVFGENSFGQLGLKGQQPRLLPEVVPLPK---------RAIVVSCG 661
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
HT L +D L CG + + +G G R SVP +
Sbjct: 662 REHTCILLEDGDLMACGSVRSSGVGVGFG-------ARFSVPRRI 699
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 20 PSRMDHFLDLVVTD------IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT--DAN 71
P++ + F +VV D + CGF +A+ G ++SWG + GQLG+ + ++
Sbjct: 790 PAQRNLFRRVVVPDFEDVCAVDCGFSFAIAIGSSGALYSWGWNTHGQLGHGLAVELGESV 849
Query: 72 MEPREIRALSGLG-VVQISAGGWHSAARTQDGFLYAWGWNN--GGQVGVEGKLDLVVHDP 128
P+EI + L V+Q++ GG A TQ G +Y WG G GVE K L P
Sbjct: 850 FTPKEISVVKTLSQVIQVACGGTFVVALTQCGEVYTWGEAAFCGHGNGVE-KFFLC---P 905
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
++ +D + VA G RH AL D+++ WG G
Sbjct: 906 KRLASLQDISA-------VAAGDRHAAALSYDHTIYAWGNG 939
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 24/165 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG +ALTQ G V++WG + G+ + + P+ + +L + V +A
Sbjct: 864 VIQVACGGTFVVALTQCGEVYTWGEAAF--CGHGNGVEKFFLCPKRLASLQDISAV--AA 919
Query: 91 GGWHSAARTQDGFLYAWG---WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
G H+AA + D +YAWG NGG GV + ++ HP V +
Sbjct: 920 GDRHAAALSYDHTIYAWGNGPVGNGGAAGVMVPTPVALNFVHP-------------VRQL 966
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
CG +T + D L+ G N Q CG Q ++ + P
Sbjct: 967 FCGQVNTFVITDVGDLYVWGLNTSGQ----CGALQGAINSSQLAP 1007
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 68/160 (42%), Gaps = 21/160 (13%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT---------- 68
+P+RM + + V +CG C LT + VFS GN QLG S
Sbjct: 363 IPTRMA--IPVPVLSFSCGAYSCYFLTADNKVFSCGNDDWSQLGAGKSKELRSSSVVRHG 420
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAA-RTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
+ + SG + +++AG +AA Q +Y WG N+ GQ +EG L V
Sbjct: 421 EGKYRLFRVPLRSGDHICKLTAGSAFAAAIGLQSRRMYLWGQNSFGQCLMEG--SLTVST 478
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLAL--CDDNSLWG 165
P + D Q +VVDVACGS + C WG
Sbjct: 479 PVAV----DIPGQYSEVVDVACGSFYAAIAFSCGSVGTWG 514
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
+ + F P R+ D ++ +A G H AL+ + +++WGNG G + G M
Sbjct: 898 VEKFFLCPKRLASLQD--ISAVAAGDRHAAALSYDHTIYAWGNGPVG-----NGGAAGVM 950
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-VEGKLDLVVHDPHPM 131
P + V Q+ G ++ T G LY WG N GQ G ++G ++ P
Sbjct: 951 VPTPVALNFVHPVRQLFCGQVNTFVITDVGDLYVWGLNTSGQCGALQGAINSSQLAPGRK 1010
Query: 132 SWSED 136
+ +ED
Sbjct: 1011 TINED 1015
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 57/134 (42%), Gaps = 13/134 (9%)
Query: 23 MDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG 82
+D V+ D +CG H LT+ G V+ +G S GQLG G + P E+ L
Sbjct: 597 IDALSSHVIVDASCGCFHTAVLTKHGQVYVFGENSFGQLGL--KGQQPRLLP-EVVPLPK 653
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+V +S G H+ +DG L A G VGV V P + QN
Sbjct: 654 RAIV-VSCGREHTCILLEDGDLMACGSVRSSGVGVGFGARFSV--PRRI-------LQNF 703
Query: 143 KVVDVACGSRHTLA 156
++ VA G H +A
Sbjct: 704 LIMSVASGDLHAIA 717
>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
Length = 815
Score = 80.1 bits (196), Expect = 7e-13, Method: Composition-based stats.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + LD+ + ++CG H A+T++G +++WG G GQLG+ S + + P+++ A
Sbjct: 248 PQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGH--SNVKSYLHPKKVAA 305
Query: 80 --LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK---LDLVVHDPHPMSWS 134
L+G+ V Q+S G + ++ LYA+G Q+G + LD+ D H S
Sbjct: 306 FSLNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSS 365
Query: 135 ----EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
E + + IK V CG HTLAL +DN ++ GW S GC
Sbjct: 366 PKVVEALEDKKIKY--VTCGHLHTLALTEDNEVYVWGWG-----SSGC 406
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 7/144 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V DI+ G+ A+T+ G +F+WG +GQLG N P+ ++ L + +V +S
Sbjct: 207 VIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRWF--NSSPQLVKTLLDVKIVSVSC 264
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H A T+DG LY WG GQ+G + HP + F I+V V+CG
Sbjct: 265 GRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYL----HPKKVAA-FSLNGIQVSQVSCG 319
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
S T+ L + L+ G EY QL
Sbjct: 320 SNFTMVLGRNQILYAFGHGEYAQL 343
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 10/118 (8%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V S GN GQLG + ++EP+ + +L G +V S+G H+ ++ G +Y+WG
Sbjct: 3 VISVGNNKNGQLGIEN--IKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGR 60
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WG 165
GQ+GV K+ L P+ + + +VV VACG+ H+LAL D + WG
Sbjct: 61 GKEGQLGVPEKM-LFSTKPNLIK-----TLLHERVVKVACGNFHSLALTDQGRVYEWG 112
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ V+ + G H + +++ G V+SWG G GQLG P + +P I+
Sbjct: 25 PKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGKEGQLGVPEKML-FSTKPNLIKT 83
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWG 108
L VV+++ G +HS A T G +Y WG
Sbjct: 84 LLHERVVKVACGNFHSLALTDQGRVYEWG 112
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM----------EPREIRAL 80
V+ ++CG + + L + I++++G+G QLG +M P+ + AL
Sbjct: 313 VSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKVVEAL 372
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
+ ++ G H+ A T+D +Y WGW + G +G+ K
Sbjct: 373 EDKKIKYVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNSK 412
Score = 45.4 bits (106), Expect = 0.019, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 14 SQVFHMPSRMDHFL-----------DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
+Q M SR +HF D + + CG H LALT++ V+ WG GS G LG
Sbjct: 349 TQHLDMGSRDNHFKYSSPKVVEALEDKKIKYVTCGHLHTLALTEDNEVYVWGWGSSGCLG 408
Query: 63 YPSSGTDANMEPREIRALSGLGVVQISAGGWHS 95
S + P+ + ++SG + ISAG HS
Sbjct: 409 LNSK--RFQLVPQLVTSISGEEISCISAGEKHS 439
>gi|357460951|ref|XP_003600757.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489805|gb|AES71008.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 260
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IACG H +T G V ++G G GQ G S TD + P + +L G+ + ++A
Sbjct: 85 IKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGS--TDDELSPTCVSSLLGIQIEGVAA 142
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVAC 149
G WH+ + DG +YA+G N GQ+G D P + D S +N+ V ++C
Sbjct: 143 GLWHTVCTSADGDVYAFGGNQFGQLGTGS--DQAETLPRLL----DCPSLENVNVKTISC 196
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+RHT + D+ ++ GWN+Y QL +G
Sbjct: 197 GARHTALVTDNGKVFSWGWNKYGQLGLG 224
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + L + + +A G H + + +G V+++G GQLG S + + +
Sbjct: 126 PTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPS 185
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L + V IS G H+A T +G +++WGWN GQ+G+ +D + +
Sbjct: 186 LENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNI--------PSEVAI 237
Query: 140 QNIKVVDVACGSRHTLALCD 159
+ +VACG HTL L +
Sbjct: 238 EGCIAKNVACGWWHTLLLAE 257
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 100/240 (41%), Gaps = 49/240 (20%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM--EPRE 76
MP + + +T +A G H L L+ G V+ WG G GQLG G+ M P
Sbjct: 1 MPCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGL---GSRVRMVSSPHI 57
Query: 77 IRALSGLGVVQ-------------------ISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
I + +VQ I+ GG HSA T G + A+GW GQ G
Sbjct: 58 IPCIDSSSLVQGSMSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCG- 116
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+G D + P S I++ VA G HT+ D ++ G N++ QL G
Sbjct: 117 QGSTD---DELSPTCVSSLL---GIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQL--G 168
Query: 178 CGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSIV----KLFAGHWN 233
G Q + RL +CP + E+ N +S A+ +++V K+F+ WN
Sbjct: 169 TGSDQAETLPRL------LDCPSL----ENVNVKTISC--GARHTALVTDNGKVFSWGWN 216
>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
Length = 425
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
F + R D +ACG H L LT+ G VF+ G GQLG SS T + +EP E
Sbjct: 61 FFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHS-LEPIE 119
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ VV++SAG HS A T DG L+AWG N+ GQ+G+ + VV P + D
Sbjct: 120 VSGFD-EKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLAD 178
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV--SVMTRLSVPEH 194
+V VA GS H++A ++ + G +L G S + S+ T P
Sbjct: 179 -----SRVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRL 233
Query: 195 VKNCPIVKL 203
+KN VK+
Sbjct: 234 IKNLDGVKI 242
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS----- 65
K +V P ++D D V +A G +H +A T+EG V SWG G+LG+
Sbjct: 161 KRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSIL 220
Query: 66 --SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLD 122
S T + PR I+ L G+ + +I+AG HSA + G L+ +G G G +L
Sbjct: 221 GFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGDELR 280
Query: 123 LVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V + P S +VACG HT + D L+ G NE L +G
Sbjct: 281 PTVVEEVPFS------------EEVACGGYHTCVVTDSGDLYSWGSNENGCLGLG 323
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 8 GPLKMLSQVFHM--PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
G L + S V H P + F D V +++ G H A+T +G +F+WG S GQLG
Sbjct: 103 GQLGIGSSVTHSLEPIEVSGF-DEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGK 161
Query: 66 SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
PR++ L+ V ++ G HS A T++G + +WG G++G K ++
Sbjct: 162 RAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILG 221
Query: 126 HDPHPMSWSEDF--DSQNIKVVDVACGSRHTLALCDDNSLW 164
++ + +K+ +A G H+ + + +L+
Sbjct: 222 FSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLF 262
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 23/140 (16%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR-ALSGLGVVQISAG 91
++ACG H +T G ++SWG+ G LG GTD P ++ +L V ++S
Sbjct: 292 EVACGGYHTCVVTDSGDLYSWGSNENGCLGL--GGTDMVRSPEVLKSSLFKFPVSKVSC- 348
Query: 92 GWHSAARTQDGFLYAWGW------------NNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
GW A G +Y WGW ++GGQ+G +D +P + +
Sbjct: 349 GWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYF--EPMMVEF-----G 401
Query: 140 QNIKVVDVACGSRHTLALCD 159
+N + V V+CG HT A+ +
Sbjct: 402 KNARAVHVSCGFNHTGAIFE 421
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 53 WGNGSRGQLGYPS--SGTDANMEPREIRALSG----LGVVQISAGGWHSAARTQDGFLYA 106
WGNG G+LG + S P + G ++ GG H+ T+ G ++A
Sbjct: 37 WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
G N+ GQ+G+ V H P+ S FD KVV+V+ G+ H+ A+ D L+
Sbjct: 97 AGLNDFGQLGIGSS---VTHSLEPIEVS-GFDE---KVVEVSAGNHHSCAVTADGKLFAW 149
Query: 167 GWNEYNQLSMGCGVSQVSVMTRLSVPEHV-----KNCPIVKLFAEH 207
G N QL +G +V +S P V +V L +EH
Sbjct: 150 GRNSSGQLGLGKRAGKV-----VSTPRKVDCLADSRVKMVALGSEH 190
>gi|428171592|gb|EKX40507.1| hypothetical protein GUITHDRAFT_96261, partial [Guillardia theta
CCMP2712]
Length = 424
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 92/186 (49%), Gaps = 7/186 (3%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
H LAL++ GI+F+WG GQLG + T +P + L Q+SAGG HS A T
Sbjct: 188 HTLALSRSGILFAWGINHMGQLG--TGDTADRFQPTPTKNSKDLLFFQVSAGGEHSMAVT 245
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK---VVDVACGSRHTLA 156
G +Y WG + GQ+G + LD+ + P E +K +V VA G H++A
Sbjct: 246 SLGKVYVWGSGSSGQLG-QDSLDIGPNSVEPRRSLEAILVPGLKDQFIVQVAAGWLHSIA 304
Query: 157 LCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVP 216
L D +W G N + QL +G +++ + + +L E P++ + A H +S L+
Sbjct: 305 LSKDGEIWIWGGNRHGQLGLGDKLNRFAPV-KLQGKEFQMLGPVISIAAGHGHSLFLNSS 363
Query: 217 EHAKDS 222
H S
Sbjct: 364 GHVFSS 369
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 12/183 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPRE-- 76
P+ + DL+ ++ G +H +A+T G V+ WG+GS GQLG S N +EPR
Sbjct: 220 PTPTKNSKDLLFFQVSAGGEHSMAVTSLGKVYVWGSGSSGQLGQDSLDIGPNSVEPRRSL 279
Query: 77 ----IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+ L +VQ++AG HS A ++DG ++ WG N GQ+G+ KL+ P+
Sbjct: 280 EAILVPGLKDQFIVQVAAGWLHSIALSKDGEIWIWGGNRHGQLGLGDKLNRFA----PVK 335
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
V+ +A G H+L L ++ G N+ QL +G + + S+ + + +P
Sbjct: 336 LQGKEFQMLGPVISIAAGHGHSLFLNSSGHVFSSGRNDAGQLGVGNSIDRSSI-SFVPIP 394
Query: 193 EHV 195
+
Sbjct: 395 NRI 397
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
EG V+ +G+ + GQLG S + + P + L + ++AG S + + G L+
Sbjct: 94 NEGDVYGFGSNNFGQLGTGS--LNNTVIPMIVPVLRNQNMSAVAAGEEFSVSSSLKGRLW 151
Query: 106 AWGWNNGGQVGV-EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
+WG N GQ+G+ + ++L + P + S V + HTLAL L+
Sbjct: 152 SWGRNYRGQLGLTDAGINLCTYPPCSVEKS------------VKLTNHHTLALSRSGILF 199
Query: 165 GCGWNEYNQLSMG 177
G N QL G
Sbjct: 200 AWGINHMGQLGTG 212
>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 448
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 87/162 (53%), Gaps = 5/162 (3%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
VF+ P R+ F +V+ +ACG DH + + G +++ G+ + G+LG + +P+
Sbjct: 11 VFYYP-RVCSF-QIVIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQ 68
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ ALS V+Q+S G H+ A G L++WG ++ GQ+G+ + ++P +++S
Sbjct: 69 LVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINS--NGSHYNPQLVNFS- 125
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D N V DV+CG HT+A+ + + G + QL G
Sbjct: 126 DLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTG 167
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 14/188 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + V ++CG H A+ G +FSWG+ S GQLG S+G+ N +
Sbjct: 67 PQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSD 126
Query: 80 LSGLG--VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+ V +S G +H+ A ++G + ++G GQ+G + + P ++
Sbjct: 127 LKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNK--QYKPFLLNSLS-- 182
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
+++ V CG HTL L + ++ CG N+ QL G +S + EH
Sbjct: 183 -----QIIKVKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGNISSPRLVLELEH--- 234
Query: 198 CPIVKLFA 205
I K+FA
Sbjct: 235 SFIKKIFA 242
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 65/169 (38%), Gaps = 50/169 (29%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG---------------------------- 62
+ + CGF H L L + G V+S G GQLG
Sbjct: 184 IIKVKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGNISSPRLVLELEHSFIKKIFAG 243
Query: 63 -YPSSGTDAN-------------MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ ++ TDAN + P+ +R G V +IS G A T DG +Y+WG
Sbjct: 244 SHSAAITDANEIYFFGKSQLGQFLYPQLVRICQG-DVNEISIGNHFGVAVTYDGKVYSWG 302
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
N GQ+G +G D+ + +E KV+ CG + + L
Sbjct: 303 INQQGQLG-QGDSDVRIIPSLVEPLNEK------KVISATCGENYVICL 344
>gi|428184688|gb|EKX53542.1| hypothetical protein GUITHDRAFT_100528 [Guillardia theta CCMP2712]
Length = 709
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D+ V+ +ACG D LAL++ G V SWG+ G+LG S + EP + AL +V+
Sbjct: 147 DVPVSQVACGEDFFLALSEAGRVLSWGSNKHGELGLSSKLSMRMDEPTIVPALQSQRIVK 206
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD- 146
I++G H AA +++ L+ WG N GQ GV+G L+ +P + D
Sbjct: 207 IASGMRHCAALSEEKKLFMWGSNMVGQCGVKGADSLL--EPTRVGAIAGGGGGEGSPDDL 264
Query: 147 ---VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR 188
VACG HT+ L +L+ G N QL G G +Q S + R
Sbjct: 265 VELVACGHYHTMILTTRGALYSTGLNRDGQL--GNGSTQNSDLFR 307
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 24/187 (12%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
LS P+ + + IA G HC AL++E +F WG+ GQ G G D+ +
Sbjct: 186 LSMRMDEPTIVPALQSQRIVKIASGMRHCAALSEEKKLFMWGSNMVGQCGV--KGADSLL 243
Query: 73 EPREIRALSGLG---------VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
EP + A++G G V ++ G +H+ T G LY+ G N GQ+G +
Sbjct: 244 EPTRVGAIAGGGGGEGSPDDLVELVACGHYHTMILTTRGALYSTGLNRDGQLGNGSTQNS 303
Query: 124 VVHDP-HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN-EYNQLSMGCG 179
+ P + +S D + +ACG+ H++A+ ++ + WG G +Y +L G
Sbjct: 304 DLFRPVYKISSLHD-------ISIIACGAAHSIAINKNSQVFAWGDGSKGQYGRL--GAK 354
Query: 180 VSQVSVM 186
V+ ++M
Sbjct: 355 VASTTLM 361
>gi|397609435|gb|EJK60365.1| hypothetical protein THAOC_19295 [Thalassiosira oceanica]
Length = 1106
Score = 80.1 bits (196), Expect = 7e-13, Method: Composition-based stats.
Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 23/196 (11%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-- 71
S+ + P+ +D + + D+ G HC A++ G +++WG G+RGQLG+ G +
Sbjct: 541 SRDLNYPTLVDQLKGVQIADVGGGLSHCAAVSSAGHLYTWGTGTRGQLGFGQLGAEEEEF 600
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P + + +++S G H+A Q+G LY WG +GG++G+ +D V + P +
Sbjct: 601 FCPIPTKLVFPTRALRVSCGNSHTACIGQEGQLYVWGDPDGGRLGLGEDVDNVQYSPVLV 660
Query: 132 -SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
S +++ +VVDV+CG TL L S+ E ++S+ + S R+
Sbjct: 661 DSLAKE------RVVDVSCGCHQTLVLTATTSV-----GENTRISV-----RTSAGGRVY 704
Query: 191 V--PEHV--KNCPIVK 202
V P+H+ + CP +
Sbjct: 705 VAGPKHILGQTCPTFR 720
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 31 VTDIACGFDHCLALTQEG----IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
+ I+ G +HC L + +++WG GS G+LG+ S D N P + L G+ +
Sbjct: 502 IKAISGGANHCALLLHDANSSASLYTWGVGSLGRLGHEKS-RDLNY-PTLVDQLKGVQIA 559
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH-PMSWSEDFDSQNIKVV 145
+ G H AA + G LY WG GQ+G G+L + P+ F ++ ++V
Sbjct: 560 DVGGGLSHCAAVSSAGHLYTWGTGTRGQLGF-GQLGAEEEEFFCPIPTKLVFPTRALRV- 617
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+CG+ HT + + L+ G + +L +G V V
Sbjct: 618 --SCGNSHTACIGQEGQLYVWGDPDGGRLGLGEDVDNV 653
>gi|68073201|ref|XP_678515.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499009|emb|CAH95917.1| conserved hypothetical protein [Plasmodium berghei]
Length = 426
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 20 PSRMDHFLD--LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +++ F + +I CG H LALT+ G V+ G G G+LG + G E +
Sbjct: 178 PQKIEAFNNDNSEFINICCGEQHSLALTESGKVYGCGKGEFGRLGKGNHGDQLFFEEIDY 237
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-DLVVHDPHPMSWSED 136
+ + + I+ G SAA + +G +Y WG N+ GQ+G+E + DL H+ +P +
Sbjct: 238 FTNNNIIIKDIACGNSFSAALSNNGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNK-VKY 296
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLW 164
F+ +NIK+ +ACG H +A + N ++
Sbjct: 297 FEIENIKIKLIACGDNHMIACSESNIIY 324
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG-----TDANME 73
+P ++ +F + + ++ G +H A +G ++++G +GQLG S + ++
Sbjct: 61 LPEKISNFENKQINKLSAGCNHA-AFIVDGKIYTYGLNDKGQLGRTLSNEGGKESKISLT 119
Query: 74 PREIRALS-GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P EI + + + G H+ A + LY+WGW G G ++
Sbjct: 120 PEEIELDNKNIKFKDVCCGYKHTLAVDVNNDLYSWGWGGNFFKGANGLGQGNKNNLMKPQ 179
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E F++ N + +++ CG +H+LAL + ++GCG E+ +L G
Sbjct: 180 KIEAFNNDNSEFINICCGEQHSLALTESGKVYGCGKGEFGRLGKG 224
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 74/141 (52%), Gaps = 15/141 (10%)
Query: 20 PSRMDHFL--DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P+++ +F ++ + IACG +H +A ++ I++ WG SR L P + T + P+
Sbjct: 291 PNKVKYFEIENIKIKLIACGDNHMIACSESNIIYFWG--SRAWLE-PKAIT---LNPKYQ 344
Query: 78 RALSGLGVVQISAGG--WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+L + +I AGG ++ + D LY+WG +N + ++ K + H+ + S+
Sbjct: 345 NSLIKKNIDKIQAGGSTYYYSMLLSDNKLYSWGKHNSSCLALKDKKN---HNEPTLVDSD 401
Query: 136 DFDSQNIKVVDVACGSRHTLA 156
F+++ + D++CG LA
Sbjct: 402 LFNNE--IICDISCGHGRVLA 420
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 22 RMDHFLD--LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA---NMEPRE 76
+D+F + +++ DIACG AL+ G V+ WG GQLG +S D + P +
Sbjct: 234 EIDYFTNNNIIIKDIACGNSFSAALSNNGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNK 293
Query: 77 IR--ALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
++ + + + I+ G H A ++ +Y WG
Sbjct: 294 VKYFEIENIKIKLIACGDNHMIACSESNIIYFWG 327
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 157 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 213
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 214 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 266
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 267 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 320
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 92 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 149
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 150 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 205
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 206 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 243
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 197 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 254
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 255 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 311
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 312 -----RIIEIAACHSTHTSA 326
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 251 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 307
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 308 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 345
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +L+G
Sbjct: 44 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGK 101
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 102 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 155
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 156 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 204
>gi|299116914|emb|CBN75024.1| Regulator of chromosome condensation, RCC1; Ankyrin ubiquitin
interaction motif, zinc finger protein [Ectocarpus
siliculosus]
Length = 1310
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+V +P+ +D VTD++ H ALT+EG +++WG GQLG+ S+G+ P
Sbjct: 239 EVCMLPTPVDGLAHQAVTDVSVAETHTAALTREGELYTWGRDRFGQLGHGSAGSSGRFAP 298
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG 119
+ + L + VV ++AG H+A T G Y +G NN GQ+G+ G
Sbjct: 299 KRVEGLRKVTVVAVAAGTEHTAVATSSGHCYTFGRNNHGQLGLAG 343
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R++ +L VT +A H A+T G +F+WG+G G+LG+ + M P +
Sbjct: 192 PRRVESLANLHVTRVAASKHHSAAVTVCGKLFTWGHGKSGRLGH--GNEEVCMLPTPVDG 249
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ V +S H+AA T++G LY WG + GQ+G P +
Sbjct: 250 LAHQAVTDVSVAETHTAALTREGELYTWGRDRFGQLGHGSAGSSGRFAPKRVEG-----L 304
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+ + VV VA G+ HT + G N + QL + GV +
Sbjct: 305 RKVTVVAVAAGTEHTAVATSSGHCYTFGRNNHGQLGL-AGVKET 347
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G VFS+G LGY S G + PR + +L+ L V +++A HSAA T G L+ W
Sbjct: 167 GDVFSFGKAD-FTLGYDSFGRADIIPPRRVESLANLHVTRVAASKHHSAAVTVCGKLFTW 225
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G G++G G ++ + P P+ + V DV+ HT AL + L+ G
Sbjct: 226 GHGKSGRLG-HGNEEVCML-PTPVDG-----LAHQAVTDVSVAETHTAALTREGELYTWG 278
Query: 168 WNEYNQLSMGCGVS 181
+ + QL G S
Sbjct: 279 RDRFGQLGHGSAGS 292
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 25/98 (25%)
Query: 24 DHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
D +D+V D+A H +AL + G+VF+WG G+ LG ++PRE R G
Sbjct: 431 DARVDIV--DVAAARCHNVALDRVGMVFTWGFGA-DHLG---------LDPRETRTARGP 478
Query: 84 GVV-------------QISAGGWHSAARTQDGFLYAWG 108
+V +SA HS T G L+ WG
Sbjct: 479 QLVAAMLPENCGGNPISVSASDQHSCVVTDTGDLFTWG 516
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTINQPIPRRVTGCLQNKVVVTI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 211 ACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 317
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC----GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+D L IAC H + T EG VF+WG+ + QLG + T+ + P
Sbjct: 89 PRRLD---SLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPC 143
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I LS V++++ G +HS T DG ++AWG+NN GQVG ++ P P +
Sbjct: 144 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TINQPIPRRVT 199
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 200 GCL--QNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLG 240
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSTHTSA 323
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +LSG
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGK 98
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 152
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G ++Q +P V C
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQ-------PIPRRVTGC 201
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
>gi|313768166|ref|YP_004061597.1| hypothetical protein BpV1_167 [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599773|gb|ADQ91794.1| hypothetical protein BpV1_167 [Bathycoccus sp. RCC1105 virus BpV1]
Length = 5688
Score = 79.7 bits (195), Expect = 8e-13, Method: Composition-based stats.
Identities = 56/156 (35%), Positives = 78/156 (50%), Gaps = 14/156 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V D + LALT + V+ WG +G +SGT P + AL G +V++
Sbjct: 942 VIDFHANHNIALALTSDNEVYIWGTEYNSSMG-GASGTTGT--PTHMTALDGKNIVKVRT 998
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQV--GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
GG+ A + DG LY+WG+NN Q+ G G + P M+W F +NIKVVDVA
Sbjct: 999 GGYQGYAISSDGKLYSWGYNNNYQLPKGATGN----ISTPEEMTW---FSRKNIKVVDVA 1051
Query: 149 CGSRHT--LALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
G T LAL D +++ G + + QL G G Q
Sbjct: 1052 PGHNETAHLALDDQGNMYVWGIDNHGQLGSGAGGVQ 1087
>gi|260826876|ref|XP_002608391.1| hypothetical protein BRAFLDRAFT_95399 [Branchiostoma floridae]
gi|229293742|gb|EEN64401.1| hypothetical protein BRAFLDRAFT_95399 [Branchiostoma floridae]
Length = 448
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 8/146 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG+D LA+T++G +FSWG+ + GQLG P ++ P ++ L G+ +V ++A
Sbjct: 106 VDTVACGWDFTLAVTEDGQLFSWGSNAFGQLGVPEVKGHTSV-PTPVQTLQGVRIVGVAA 164
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A G ++ WG GQ+G EG+ V + D +S +V V
Sbjct: 165 GLRHAVALDDTGSVWTWGAGKRGQLGRLEEGRCPTVSKQTGKVQL--DVES---SIVAVK 219
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
GS H+LAL +D +W G +Y QL
Sbjct: 220 AGSYHSLALTEDKRVWTWGRADYGQL 245
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT--DANMEPRE 76
+P+ + + + +A G H +AL G V++WG G RGQLG G + + +
Sbjct: 147 VPTPVQTLQGVRIVGVAAGLRHAVALDDTGSVWTWGAGKRGQLGRLEEGRCPTVSKQTGK 206
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ +V + AG +HS A T+D ++ WG + GQ+G G ++ PH S +
Sbjct: 207 VQLDVESSIVAVKAGSYHSLALTEDKRVWTWGRADYGQLGRFGDRTVM---PHSCSQPAE 263
Query: 137 FDS--------------QNIKVVDVACGSRHTLALCDDNSLWGCG 167
S +N K ++ C +L +++GCG
Sbjct: 264 LSSLYGVKQVGTIPTVLENFKNMEFECEKDSKGSLWGHCAIFGCG 308
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 41 CLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQ 100
C A+ G S GQLG D P+++ ++ V ++ GG H+A +
Sbjct: 14 CQAVQYSPTYKQKGANSYGQLGV--GHCDDRHSPQQLEGVN-FRVKAVTGGGGHTAFISA 70
Query: 101 DGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
+G L+ GWN GQ+G+ + D+ V + +E D+ VACG TLA+ +D
Sbjct: 71 EGRLFVCGWNQKGQLGLGHREDVSVLT-QVTTLTEPVDT-------VACGWDFTLAVTED 122
Query: 161 NSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
L+ G N + QL GV +V T SVP V+ V++
Sbjct: 123 GQLFSWGSNAFGQL----GVPEVKGHT--SVPTPVQTLQGVRI 159
>gi|145334859|ref|NP_001078775.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|62320260|dbj|BAD94537.1| UVB-resistance protein UVR8 - like [Arabidopsis thaliana]
gi|332010007|gb|AED97390.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 276
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +T IACG H LALT+EG V SWG+G GQLG SS P EI A
Sbjct: 136 PMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLG--SSSLRNQKVPTEIEA 193
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ +V I++GG SAA T G L+ WG Q+GV G ++ +E+ +
Sbjct: 194 LADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDEC 253
Query: 140 QNIKVVDVACGSRHTLAL 157
Q KV+ ++ G+ H L L
Sbjct: 254 QPHKVISISIGASHALCL 271
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS++ L + V ++CG +ALT+EG +++WG S +LG + EP
Sbjct: 82 LSVPSKVKA-LTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDN--LGGWEPMP 138
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ +L G+ + QI+ GG+HS A T++G + +WG GQ+G + V +E
Sbjct: 139 VPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVP-------TEI 191
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLW 164
+ K+V +A G + A+ D LW
Sbjct: 192 EALADKKIVFIASGGSSSAAITDGGELW 219
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME----- 73
+P R+D D ++ IA H A+T+ G ++ WG G E
Sbjct: 25 VPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGR-EEGDGRLGLGPGRGPNEGGGLS 83
Query: 74 -PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P +++AL+ + V +S GG+ + A T++G L+ WG N+ ++G L +P P+
Sbjct: 84 VPSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLG--GWEPMPVP 140
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +++ +ACG H+LAL ++ + G + QL
Sbjct: 141 -----SLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQL 177
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Query: 54 GNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGG 113
G G G LG+ + + PR + + I+ G H+AA T+ G LY WG G
Sbjct: 8 GYGGFGALGHKVYTRE--LVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEG- 64
Query: 114 QVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
+ ++ +S + + V V+CG T+AL + LW G N +
Sbjct: 65 DGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYE 124
Query: 174 LSMG 177
L G
Sbjct: 125 LGRG 128
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 84/163 (51%), Gaps = 15/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
P+ ++ ++VT +A G HCLALT G VFSWG G G+LG+ G+ A E P+
Sbjct: 3695 PTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGH---GSKALCERPKL 3751
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L VV ++ GG HSA T G LY WG G++G D + P + E+
Sbjct: 3752 IESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQL--KPKKV---EE 3806
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
N V+DVACGS TL + D +W G +Y +L G
Sbjct: 3807 LAGHN--VLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRG 3847
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 83/150 (55%), Gaps = 13/150 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ D+ACG H A+T G +++WG+G G+LG+ ++P+++RALS VVQ++
Sbjct: 2793 IRDVACGSSHSAAVTSSGELYTWGSGEYGRLGH--GDNVPQLKPKQVRALSHERVVQVAC 2850
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS-EDFDSQNIKVVDV 147
G + A T+ ++Y+WG + G++G G D + + E +SQ +V+ V
Sbjct: 2851 GSRDAQTLALTERHWVYSWGDGDFGKLGKGGS------DGSSLPQNVETLNSQ--QVIQV 2902
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG++ +LAL + +W G +Y +L G
Sbjct: 2903 ECGAQFSLALSKNGKVWTWGKGDYFRLGHG 2932
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +++ V D+ACG L ++++G+V+SWG+G G+LG G+D P++I
Sbjct: 3801 PKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLG--RGGSDGCKFPQKI 3858
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L GV+++ G S A T G +Y WG + ++G G D H P +
Sbjct: 3859 DSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLG-HGSED---HVRRPQAVQGAL 3914
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+ VA GS H +A D ++ G N+ QL G
Sbjct: 3915 --QGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDG 3952
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 10/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P ++D + V + CG +ALT G+V++WG G +LG+ S D P+ ++
Sbjct: 3854 FPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSE--DHVRRPQAVQ 3911
Query: 79 -ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G V+Q++ G H A T G ++ WG N+ GQ+G +G + + P ++
Sbjct: 3912 GALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLG-DGSTN-AIQRPKLVA----- 3964
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ K+ VACGS HT++
Sbjct: 3965 SLKGKKMNRVACGSAHTVS 3983
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 13/139 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P ++ V + CG LAL++ G V++WG G +LG+ G+D+++ P+ +
Sbjct: 2887 LPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGH---GSDSHVRWPQVV 2943
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ V+Q+S G H A T G +YAWG N+ GQ G V P + E
Sbjct: 2944 EELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGNGNT--TVNRKPAIVRGLE-- 2999
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ +VACGS H++A
Sbjct: 3000 -----AITNVACGSSHSVA 3013
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+L +IA G ++ +G VF+ G G+ G+LG S A +P + + V
Sbjct: 2684 NLKPMNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVA 2743
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+ +GG H+ A T DG +++WG G++G K+ +D + E + I+ DV
Sbjct: 2744 VHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKIS---YDRPKLV--ESLKCKRIR--DV 2796
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
ACGS H+ A+ L+ G EY +L G V Q+
Sbjct: 2797 ACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQLK 2833
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHS 95
G H LALT +G VFSWG G G+LG+ G + + P+ + +L + ++ G HS
Sbjct: 2747 GGRHALALTIDGRVFSWGEGEDGKLGH---GNKISYDRPKLVESLKCKRIRDVACGSSHS 2803
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR--H 153
AA T G LY WG G++G G + + S + +VV VACGSR
Sbjct: 2804 AAVTSSGELYTWGSGEYGRLG-HGDNVPQLKPKQVRALSHE------RVVQVACGSRDAQ 2856
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLAL + + ++ G ++ +L G
Sbjct: 2857 TLALTERHWVYSWGDGDFGKLGKG 2880
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Query: 47 EGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYA 106
E VF WG + QLG G+ EP+ +S L + I+ G + DG ++A
Sbjct: 2651 ECKVFVWGLNDKDQLG-GLKGSKIK-EPKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFA 2708
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
G G++G+ + V P P++ D IK V V G RH LAL D ++
Sbjct: 2709 CGEGTNGRLGLGHSHN--VAQPKPLT---DLSPYFIKKVAVHSGGRHALALTIDGRVFSW 2763
Query: 167 GWNEYNQLSMGCGVS 181
G E +L G +S
Sbjct: 2764 GEGEDGKLGHGNKIS 2778
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 11/156 (7%)
Query: 24 DHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
D L I G ALT +G V++ G GT++ P I L +
Sbjct: 3647 DALTALRPVQIVGGEQTLFALTSDGKVYA--TGYGAGGRLGIGGTESVSTPTLIETLQHV 3704
Query: 84 GVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
V Q++ +GG H A T G +++WG + G++G K + P + D
Sbjct: 3705 IVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSK--ALCERPKLIESLRD----- 3757
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
VV VACG H+ + L+ G Y +L G
Sbjct: 3758 KHVVSVACGGAHSACITASGELYTWGKGRYGRLGHG 3793
>gi|348683252|gb|EGZ23067.1| hypothetical protein PHYSODRAFT_479839 [Phytophthora sojae]
Length = 883
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 16/173 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM--EPREI 77
P R+ + +ACG H L G V++WG+ SRGQLG+ S G+ P +
Sbjct: 568 PQRVLALQHQTIVQVACGAFHTLVTDLNGHVYAWGSNSRGQLGFLSPGSSCTTVEAPSVV 627
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKLDLVVHDPHPM---- 131
L G + ++ G +HS A + DG +++WG N G++G EG LD+V P +
Sbjct: 628 ADLRGTYMSSVACGEYHSLALSSDGRVFSWGCNKYGKLGRRTEGLLDMV--QPRQLDGDW 685
Query: 132 -SWSEDFDSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
+WS D S+ + VA G H+LA+ D + + G + QL GC
Sbjct: 686 TAWSMDMKSRIGSGDRSVIRRVAAGKDHSLAITSDGAGFTWGRGDSGQLGHGC 738
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 9/151 (5%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGV 85
D V ++ G A+T++G +F+WG+ S G+LGY + D+ P+ + AL +
Sbjct: 520 DTSVVQVSGGQRFFAAVTEDGNLFTWGDCSGGRLGYDIADGDSRRVSCPQRVLALQHQTI 579
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSWSEDFDSQNIK 143
VQ++ G +H+ +G +YAWG N+ GQ+G G V P ++ D +
Sbjct: 580 VQVACGAFHTLVTDLNGHVYAWGSNSRGQLGFLSPGSSCTTVEAPSVVA-----DLRGTY 634
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ VACG H+LAL D ++ G N+Y +L
Sbjct: 635 MSSVACGEYHSLALSSDGRVFSWGCNKYGKL 665
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-- 77
PS + ++ +ACG H LAL+ +G VFSWG G+LG + G ++PR++
Sbjct: 624 PSVVADLRGTYMSSVACGEYHSLALSSDGRVFSWGCNKYGKLGRRTEGLLDMVQPRQLDG 683
Query: 78 ---------RALSGLG----VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
++ G G + +++AG HS A T DG + WG + GQ+G +D
Sbjct: 684 DWTAWSMDMKSRIGSGDRSVIRRVAAGKDHSLAITSDGAGFTWGRGDSGQLGHGCYMD-- 741
Query: 125 VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
V +P + + +VD+A G+ +L L + + + CG +
Sbjct: 742 VSEPKQVMAISAAITGTCGLVDIAGGNDLSLFLLQNGTAYICGRD 786
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
M SR+ V+ +A G DH LA+T +G F+WG G GQLG+ G ++ EP+++
Sbjct: 692 MKSRIGSGDRSVIRRVAAGKDHSLAITSDGAGFTWGRGDSGQLGH---GCYMDVSEPKQV 748
Query: 78 RALSGL-----GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
A+S G+V I+ G S Q+G Y G + D + P ++
Sbjct: 749 MAISAAITGTCGLVDIAGGNDLSLFLLQNGTAYICGRDPTLDA------DNLHLSPVLLT 802
Query: 133 WSEDFDSQNI-KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR 188
+ + + ++V V+CG H L + + ++Q S G + + R
Sbjct: 803 LPSNLEREFFGQIVSVSCGEAH-YGLLTKAGVLLLSYPSFSQPSADAGSTTTEIQER 858
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+S VVQ+S G AA T+DG L+ WG +GG++G D+ D +S + +
Sbjct: 518 VSDTSVVQVSGGQRFFAAVTEDGNLFTWGDCSGGRLG----YDIADGDSRRVSCPQRVLA 573
Query: 140 -QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
Q+ +V VACG+ HTL + ++ G N QL
Sbjct: 574 LQHQTIVQVACGAFHTLVTDLNGHVYAWGSNSRGQL 609
>gi|366166502|ref|ZP_09466257.1| regulator of chromosome condensation rcc1 [Acetivibrio
cellulolyticus CD2]
Length = 367
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 21/196 (10%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G K S+ P ++D D+V DI +H +AL + G V++WG S QLGY +
Sbjct: 192 GNGKYSSEETSKPQKIDSLKDIV--DIDASTEHSIALDKSGNVYTWGGNSEDQLGYATQI 249
Query: 68 TDANMEPREIRALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
+N EI+ +SGL + ++ AG +S A DG L+AWG N GQ+G+ G V
Sbjct: 250 EYSN----EIKKVSGLSSIKKVYAGPSNSYALDSDGTLWAWGNNIRGQIGI-GSESSEVK 304
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
P + E V D +CG H +A+ D S+W G +Y+++S+ +
Sbjct: 305 LPVKVEIEE--------VKDFSCGFEHCIAVKKDGSVWAWGDIKYSKISIDAKGREF--- 353
Query: 187 TRLSVPEHVKNCPIVK 202
+S PE V ++K
Sbjct: 354 --ISKPEKVDLDNLIK 367
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 10/163 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V CG H LAL G V+ WG GQ G ++ +P++I +L +V I A
Sbjct: 161 VKKAVCGGWHYLALLDNGDVYVWGTNPAGQFGNGKYSSEETSKPQKIDSLK--DIVDIDA 218
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
HS A + G +Y WG N+ Q+G +++ S + V G
Sbjct: 219 STEHSIALDKSGNVYTWGGNSEDQLGYATQIEYSNEIKKVSGLSS--------IKKVYAG 270
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
++ AL D +LW G N Q+ +G S+V + ++ + E
Sbjct: 271 PSNSYALDSDGTLWAWGNNIRGQIGIGSESSEVKLPVKVEIEE 313
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 85/217 (39%), Gaps = 46/217 (21%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWG---NGSRGQLGYPSSGTDANMEP---------REIR 78
+ IA LAL G VF WG NG G L S +E E +
Sbjct: 73 IKSIAASKTSVLALKGNGSVFVWGSNYNGIYGSLSIKESQKPVKIESLKDITNVSINESQ 132
Query: 79 ALS----------GLGVVQISA------------GGWHSAARTQDGFLYAWGWNNGGQVG 116
AL+ G+G+ +I+ GGWH A +G +Y WG N GQ G
Sbjct: 133 ALAVDKEGNLYNWGVGIEEITKRTELKNVKKAVCGGWHYLALLDNGDVYVWGTNPAGQFG 192
Query: 117 VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
GK + S + DS +VD+ + H++AL +++ G N +QL
Sbjct: 193 -NGK-----YSSEETSKPQKIDSLK-DIVDIDASTEHSIALDKSGNVYTWGGNSEDQLGY 245
Query: 177 GCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARL 213
+ + + ++S +K K++A NS L
Sbjct: 246 ATQIEYSNEIKKVSGLSSIK-----KVYAGPSNSYAL 277
>gi|50543738|ref|XP_500035.1| YALI0A13299p [Yarrowia lipolytica]
gi|49645900|emb|CAG83964.1| YALI0A13299p [Yarrowia lipolytica CLIB122]
Length = 498
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 88/161 (54%), Gaps = 13/161 (8%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+V + P +++ ++ IA G DH LALTQ G V +WG+ +LG+ S+ + + P
Sbjct: 235 KVQNRPVKIEELSNIAA--IAAGRDHVLALTQWGTVHTWGDSENFRLGWKSN--RSTLSP 290
Query: 75 REIRALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
RE+ GL +V + AG +HS A DG + AWG N GQ G+ G+ D D ++
Sbjct: 291 REL----GLKNIVYVGAGEFHSFAIDTDGKVLAWGLNQYGQCGILGQSDNAAVDGP--TY 344
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ D ++I V V G H+LAL D +++ G +Y+Q+
Sbjct: 345 VDALDGKDI--VAVTGGEHHSLALSKDGTVYSFGRYDYHQI 383
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGG 92
+ G H A+ +G V +WG GQ G +A ++ P + AL G +V ++ G
Sbjct: 301 VGAGEFHSFAIDTDGKVLAWGLNQYGQCGILGQSDNAAVDGPTYVDALDGKDIVAVTGGE 360
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDL---VVHD----------PHPMSW-SEDFD 138
HS A ++DG +Y++G + Q+G K DL V D P P+S ED D
Sbjct: 361 HHSLALSKDGTVYSFGRYDYHQIGFTTK-DLPEGTVRDDKGNPRFLPVPSPLSLGGEDDD 419
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
+ K+ +ACG+ H+L + D +W G++ Q
Sbjct: 420 EKLPKMRFIACGAHHSLIIDVDGRVWTWGFSSSFQ 454
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 79/197 (40%), Gaps = 34/197 (17%)
Query: 1 MCDHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQ 60
MC+ L GP K + P R+ +L + DIA G H L L +G V+SWG G
Sbjct: 98 MCE-LGLGPEK--ASTVKRP-RLSPYLSKEIVDIAVGGQHGLVLDSQGRVWSWGGNDLGA 153
Query: 61 LGYPSSGTDA---------------NMEPRE-IRAL--SGLGVVQISAGGWHSAARTQDG 102
LG +SG + + P E I AL + V+I A S A T +G
Sbjct: 154 LGRDTSGHEVLKDMDADESDDEDDPKLNPAESIPALVDTDQRFVKIEASDSLSLALTAEG 213
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
++AWG Q G G D V P+ E + + +A G H LAL
Sbjct: 214 DVWAWGSFRNSQ-GTMGFSDKVKVQNRPVKIEELSN-----IAAIAAGRDHVLALTQ--- 264
Query: 163 LWGC--GWNEYNQLSMG 177
WG W + +G
Sbjct: 265 -WGTVHTWGDSENFRLG 280
>gi|157129109|ref|XP_001661612.1| hypothetical protein AaeL_AAEL011344 [Aedes aegypti]
gi|108872360|gb|EAT36585.1| AAEL011344-PA [Aedes aegypti]
Length = 803
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 7/173 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H P+++D V +A G L T G+V S G+ S G LG+ + + P+ +
Sbjct: 460 HYPTKVDAIQRYNVVGVATGNGFTLFWTNLGVVLSCGDNSSGCLGH--GNQISLLVPKIV 517
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L+ + + Q++ G H A + G LY WG +N G +G+ GK LV +P + S+
Sbjct: 518 QKLNNIRIRQVACGSQHVVALSDGGHLYTWGSSNDGALGL-GKQMLVSTEPRRLIISQMI 576
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
QNI+ ++ CG T+ L + S + CG N +N+L G ++Q++ + +++
Sbjct: 577 --QNIR--EIYCGPDCTVILTEGGSCYCCGSNRHNRLGFGMKITQLTALQKVT 625
>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
latipes]
Length = 531
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRA-LSG 82
+ L+ V ++ACG H +ALT G V++WG + GQ+G SG+ AN PR + + L
Sbjct: 124 NMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNCGQVG---SGSTANQPTPRRVSSCLQN 180
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
V I G S A +G +Y WG+N GQ+G+ ++ + ++ Q +
Sbjct: 181 KVAVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLG-------NNGNQLTPCRLVALQGL 233
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
V+ + CG H LAL D+ L+ G N Y QL G +Q+S + +S E +
Sbjct: 234 CVLQIVCGYAHCLALSDEGVLYAWGSNTYGQLGTGNKSNQLSPVQIMSEKERI 286
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 10/173 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
SQ +P ++D + ++ G H L T++G +F+WG+ QLG + T+ +
Sbjct: 59 SQSTIVPKKLDFLNGRKIVSLSYGSGPHVLMATEDGELFAWGHNGYSQLG--NGTTNQGV 116
Query: 73 EPREIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P + A + VV+++ G HS A T G +YAWG+NN GQVG + P P
Sbjct: 117 APVLVSANMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGS----TANQPTPR 172
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S QN V + CG +LA+ D+ ++G G+N QL +G +Q++
Sbjct: 173 RVSSCL--QNKVAVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 20 PSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ L + V I CG LA+ G V+ WG GQLG ++G + P +
Sbjct: 171 PRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGN--QLTPCRLV 228
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL GL V+QI G H A + +G LYAWG N GQ+G K + + P+
Sbjct: 229 ALQGLCVLQIVCGYAHCLALSDEGVLYAWGSNTYGQLGTGNKSNQL----SPV----QIM 280
Query: 139 SQNIKVVDV-ACGSRHTLA 156
S+ ++V+V AC S HT A
Sbjct: 281 SEKERIVEVAACHSTHTSA 299
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ L V I CG+ HCLAL+ EG++++WG+ + GQLG +G +N + P +I
Sbjct: 224 PCRLVALQGLCVLQIVCGYAHCLALSDEGVLYAWGSNTYGQLG---TGNKSNQLSPVQIM 280
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +V+++A SAA+TQ G +Y WG G +
Sbjct: 281 S-EKERIVEVAACHSTHTSAAKTQSGQVYMWGQCRGQSI 318
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG LALT++G VFSWG+G G+LG G++ + P EI LSG+GV+QI
Sbjct: 2025 VIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVIQI 2082
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D V P P+ + +V+ VA
Sbjct: 2083 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIG-----GLRGRRVIHVA 2135
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H LA+ D ++ G N++ Q G
Sbjct: 2136 VGALHCLAVTDAGQVYAWGDNDHGQQGSG 2164
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ + + V +A G HCLALT EG V++WG G G+LG+ G + + P+
Sbjct: 3052 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH---GNRMSYDRPK 3108
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L+G+ V I+ G HSAA T G + WG G++G D + P +
Sbjct: 3109 LVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL--RPQLVEALL 3166
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + +D+ACGS TL + DD+++W G +Y +L G
Sbjct: 3167 GY-----RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 3205
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D+ACG H A++ +G +++WG G G+LG+ + T ++P+ + A
Sbjct: 1962 PRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNAT--QLKPKLVAA 2019
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G V+Q++ G + A T+DG +++WG + G++G G PH E
Sbjct: 2020 LAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEG--SDTPH-----EIE 2072
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I V+ + CG++ +LAL +W G +Y +L G
Sbjct: 2073 RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 2112
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L V + CG +ALT+ G V++W G +LG+ S D P+++
Sbjct: 3212 LPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGS--VDHVRRPKKVA 3269
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G +Y WG N+ GQ+G +G + + P ++
Sbjct: 3270 ALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTVT-AIQRPRLVA-----A 3322
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 3323 LQGKHIVKVTCGSAHTLAL 3341
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P ++ VV +A G H LALT +G VFSWG G G+LG+ + T +PR
Sbjct: 1907 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLD--KPRL 1964
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPM 131
+ L + ++ G HSAA + G LY WG G++G + K LV
Sbjct: 1965 VETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVA------ 2018
Query: 132 SWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+V+ VACGSR TLAL +D S++ G ++ +L G
Sbjct: 2019 ------ALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRG 2060
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V I CG LALT+ G V++WG G +LG+ G +P+ I
Sbjct: 2068 PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH--GGDQHVRKPQPIGG 2125
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWS 134
L G V+ ++ G H A T G +YAWG N+ GQ G V K LV+
Sbjct: 2126 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI--------- 2176
Query: 135 EDFDSQNIKVVDVACGSRHTLA 156
D+ + V VACGS H++A
Sbjct: 2177 -GLDA--VFVNRVACGSSHSIA 2195
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 94/239 (39%), Gaps = 63/239 (26%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS---------- 66
+ P ++H + V DIACG H A+T G V +WG G G+LG+ S
Sbjct: 3104 YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVE 3163
Query: 67 ------------------------------------------GTDANMEPREIRALSGLG 84
G+D P +I +L+GLG
Sbjct: 3164 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 3223
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+++ G S A T+ G +Y W + ++G G +D H P + Q K+
Sbjct: 3224 VIKVECGSQFSVALTKSGAVYTWSKGDFHRLG-HGSVD---HVRRPKKVAA---LQGKKI 3276
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
+ +A GS H +A D ++ G N+ QL G V+ + R + ++ IVK+
Sbjct: 3277 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGT----VTAIQRPRLVAALQGKHIVKV 3331
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 13/154 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGV--VQISA 90
IA G + Q G V++ G G+ G+LG G N+ P ++ L V V + +
Sbjct: 1870 IAGGSKSLFIVGQNGKVYACGEGTNGRLGL---GVTHNVPLPHQLPVLHQYVVKKVAVHS 1926
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A T DG +++WG G++G + L P E S+ I+ DVACG
Sbjct: 1927 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL--DKPR---LVETLRSKKIR--DVACG 1979
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S H+ A+ L+ G EY +L G +Q+
Sbjct: 1980 SSHSAAISSQGELYTWGLGEYGRLGHGDNATQLK 2013
>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
magnipapillata]
Length = 896
Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 19 MPSRMD--HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P RM+ H + V +ACG H +AL +EG V+SWG+ GQLG T P
Sbjct: 485 LPMRMENLHNQGIQVVSVACGEFHTIALCEEG-VYSWGSNEYGQLGV--GDTRTRYRPVL 541
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +S +V + G +H+ A T D +Y+WGW GQ+G++ V + +
Sbjct: 542 ITHISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKS-----VENQLTPKQIDL 596
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
DS KV+ A G H+ L ++ G + Y QL +G QV
Sbjct: 597 LDSH--KVIQAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQV 641
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P + H + + CG H LA+T + V+SWG G GQLG S + + P++I
Sbjct: 537 YRPVLITHISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKS--VENQLTPKQI 594
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L V+Q +AG HSA T ++Y +G + GQ+G+ V+ P + S
Sbjct: 595 DLLDSHKVIQAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVI--PQLVD-SLTL 651
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV------ 191
DS + ++CG T+A+ +D +++ G N Y+Q + C ++ S R
Sbjct: 652 DS----IYLISCGPFETIAISEDQTIFCWGRN-YHQFYI-CAKAESSKYGRKMASNTKDL 705
Query: 192 -----PEHVK---NCPIVKLFAEHWN 209
PE ++ PI ++F +W+
Sbjct: 706 NHRFYPETLQFQLQHPITQIFCGNWH 731
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 24/158 (15%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL--SGLGVVQISAG 91
IACG +H +T +++WG G+ P + L G+ VV ++ G
Sbjct: 450 IACGRNHIAFVTNNKELYTWGKECGGR----KDNVQNTCLPMRMENLHNQGIQVVSVACG 505
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGV-----EGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
+H+ A ++G +Y+WG N GQ+GV + L+ H + ++V
Sbjct: 506 EFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPVLITH------------ISSKQIVS 552
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
V CG+ HTLA+ D ++ GW + QL + +Q++
Sbjct: 553 VVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLT 590
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
+I+ G H A T + LY WG G G+ D V + PM E+ +Q I+VV
Sbjct: 449 RIACGRNHIAFVTNNKELYTWGKECG------GRKDNVQNTCLPMRM-ENLHNQGIQVVS 501
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
VACG HT+ALC++ ++ G NEY QL +G
Sbjct: 502 VACGEFHTIALCEE-GVYSWGSNEYGQLGVG 531
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
K L+ F+ P + L +T I CG H + LT V++WG GQLG+ + +
Sbjct: 703 KDLNHRFY-PETLQFQLQHPITQIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQS 761
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
PR ++AL ++ ++ G S A D + AWG N+ G++G+E + +L
Sbjct: 762 --APRLVKALIRRAIIGVAVGAEFSVAFDADDNIMAWGRNDEGKIGIENEGNL 812
Score = 43.5 bits (101), Expect = 0.070, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++D V A G+ H LT + V+++G GQLG S + P+ + +
Sbjct: 591 PKQIDLLDSHKVIQAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYK--QVIPQLVDS 648
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ + IS G + + A ++D ++ WG N Q + K + + S ++D +
Sbjct: 649 LTLDSIYLISCGPFETIAISEDQTIFCWG-RNYHQFYICAKAESSKYGRKMASNTKDLNH 707
Query: 140 Q----------NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + + CG+ H + L N ++ G+N+ QL
Sbjct: 708 RFYPETLQFQLQHPITQIFCGNWHYIILTSVNQVYTWGYNDCGQL 752
Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats.
Identities = 45/213 (21%), Positives = 87/213 (40%), Gaps = 34/213 (15%)
Query: 34 IACGFDHCLALTQEGIVFSWG------------NGSRGQLGYPSSGTDANME--PREIRA 79
I+CG +A++++ +F WG S+ S+ D N P ++
Sbjct: 657 ISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQF 716
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+ QI G WH T +Y WG+N+ GQ+G K+D +
Sbjct: 717 QLQHPITQIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKID---------QSAPRLVK 767
Query: 140 QNIK--VVDVACGSRHTLALCDDNSLWGCGWNE------YNQLSMGCGVSQVSVMTRLSV 191
I+ ++ VA G+ ++A D+++ G N+ N+ ++G S + +
Sbjct: 768 ALIRRAIIGVAVGAEFSVAFDADDNIMAWGRNDEGKIGIENEGNLGNSSSARQSIYCVLA 827
Query: 192 PEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSI 224
P V P + + +NS++ S+ ++ D +
Sbjct: 828 PTLVHGLPSID---DSFNSSKSSMKDYVFDEHL 857
>gi|82915023|ref|XP_728941.1| UVB-resistance protein UVR8 [Plasmodium yoelii yoelii 17XNL]
gi|23485631|gb|EAA20506.1| UVB-resistance protein UVR8 [Plasmodium yoelii yoelii]
Length = 426
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGG 92
+I CG H LALT+ G V+ G G G+LG + G E + + + + I+ G
Sbjct: 193 NICCGEQHSLALTKSGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFTNNNIIIKDIACGN 252
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKL-DLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
SAA + +G +Y WG N+ GQ+G+E + DL H+ +P + F+ +NIK+ +ACG
Sbjct: 253 SFSAALSNNGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNK-VKYFEIENIKIKLIACGD 311
Query: 152 RHTLALCDDNSLW 164
H +A + N ++
Sbjct: 312 NHMIACSESNIIY 324
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 7/165 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG-----TDANME 73
+P ++ +F + + ++ G H A +G ++++G +GQLG S + ++
Sbjct: 61 LPEKIPNFENKQINKLSAGCSHA-AFIVDGKIYTYGLNDKGQLGRTVSNGGGKESKISLT 119
Query: 74 PREIRAL-SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P EI + + G H+ A + LY+WGW G G ++
Sbjct: 120 PEEIELDDKNIKFKDVCCGYKHTLAVDVNNDLYSWGWGGNFFKGANGLGQGNKNNLMKPQ 179
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E F++ N + +++ CG +H+LAL ++GCG E+ +L G
Sbjct: 180 KIEAFNNDNSEFINICCGEQHSLALTKSGKVYGCGKGEFGRLGKG 224
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 15/141 (10%)
Query: 20 PSRMDHFL--DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P+++ +F ++ + IACG +H +A ++ I++ WG SR L P + T + P+
Sbjct: 291 PNKVKYFEIENIKIKLIACGDNHMIACSESNIIYFWG--SRAWLE-PKAIT---LNPKYQ 344
Query: 78 RALSGLGVVQISAGG--WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+L + +I AGG ++ + D LY+WG +N + ++ K + H+ + S+
Sbjct: 345 NSLIKKNIDKIQAGGSTYYYSMLISDNKLYSWGKHNSSCLALKDKKN---HNEPTLVDSD 401
Query: 136 DFDSQNIKVVDVACGSRHTLA 156
F+++ I D++CG LA
Sbjct: 402 LFNNEII--CDISCGHGRVLA 420
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 22 RMDHFLD--LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA---NMEPRE 76
+D+F + +++ DIACG AL+ G V+ WG GQLG +S D + P +
Sbjct: 234 EIDYFTNNNIIIKDIACGNSFSAALSNNGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNK 293
Query: 77 IR--ALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
++ + + + I+ G H A ++ +Y WG
Sbjct: 294 VKYFEIENIKIKLIACGDNHMIACSESNIIYFWG 327
>gi|255089166|ref|XP_002506505.1| predicted protein [Micromonas sp. RCC299]
gi|226521777|gb|ACO67763.1| predicted protein [Micromonas sp. RCC299]
Length = 401
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
VT +A G H LAL ++G VFSWGNG GQLG G + P E+ ALS GV ++A
Sbjct: 167 VTTLAAGMFHALALQEDGRVFSWGNGDYGQLGLGRPGNEDT--PTEVEALSRAGVRSVAA 224
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM---SWSEDFDSQN------ 141
GGWHSAA T G Y WG G++G+ P + SW D
Sbjct: 225 GGWHSAAVTAGGVCYVWGRGEYGRLGLGDGDCADKQRPVELTLGSWGGDNREGGGRGGSV 284
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
++V+ A G H+ L + ++ G N +L
Sbjct: 285 PRIVEAALGGTHSCLLDESGRVYSFGRNSLGRL 317
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 18/137 (13%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME----PREIRALSGLGVVQIS 89
I G + AL G +++WG S LG+ D + E PR + AL V S
Sbjct: 3 ILAGSRNSAALASSGALYTWGWNSHDTLGH-----DVDDEWIPRPRAVAALDPSDVACAS 57
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEG---------KLDLVVHDPHPMSWSEDFDSQ 140
GGWH A DG L+AWG N GQ GV+ L L V + P + ++
Sbjct: 58 LGGWHVCAADNDGRLFAWGGNEYGQAGVDTGTAGQGVHVSLHLSVPELVPFPAPDGLNAN 117
Query: 141 NIKVVDVACGSRHTLAL 157
+++ VACG + A+
Sbjct: 118 RLQITQVACGGMCSFAV 134
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 19/154 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI- 77
P+ ++ V +A G H A+T G+ + WG G G+LG P E+
Sbjct: 207 TPTEVEALSRAGVRSVAAGGWHSAAVTAGGVCYVWGRGEYGRLGLGDGDCADKQRPVELT 266
Query: 78 --------RALSGLG-----VVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKLD 122
R G G +V+ + GG HS + G +Y++G N+ G++G V GK
Sbjct: 267 LGSWGGDNREGGGRGGSVPRIVEAALGGTHSCLLDESGRVYSFGRNSLGRLGRAVSGKWS 326
Query: 123 LVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
DP P+ + +V V G RHT+A
Sbjct: 327 ---GDPAPVHFPPAPGGGAWRVTSVCAGGRHTMA 357
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 29 LVVTDIACGFDHCLALT-QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
L +T +ACG A+ + G V++WG + G++ +R GV
Sbjct: 119 LQITQVACGGMCSFAVVGRTGEVYTWGQ---------TVGSEKEPARSPVRVPGIKGVTT 169
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++AG +H+ A +DG +++WG + GQ+G L ++ P +E V V
Sbjct: 170 LAAGMFHALALQEDGRVFSWGNGDYGQLG----LGRPGNEDTP---TEVEALSRAGVRSV 222
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
A G H+ A+ + G EY +L +G G
Sbjct: 223 AAGGWHSAAVTAGGVCYVWGRGEYGRLGLGDG 254
>gi|301098611|ref|XP_002898398.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105169|gb|EEY63221.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 884
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGV 85
D + ++CG ++T++G + +WG+ S G+LGY + D+ P+ + AL G +
Sbjct: 521 DTNIVHVSCGQRFFASVTEDGHLLTWGDSSGGRLGYTIADGDSRRVSIPQRVLALQGHTI 580
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSWSEDFDSQNIK 143
+Q+S G +H+ +G ++AWG N+ GQ+G G V P + D + +
Sbjct: 581 IQVSCGAFHTLVTDLNGHVFAWGSNSKGQLGFLSPGTPSTAVETPTVVG-----DLRGVY 635
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ VACG H+LAL D ++ G N+Y +L
Sbjct: 636 MSSVACGEYHSLALSSDGRVFSWGCNKYGKL 666
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 16/179 (8%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
S+ +P R+ + ++CG H L G VF+WG+ S+GQLG+ S GT +
Sbjct: 563 SRRVSIPQRVLALQGHTIIQVSCGAFHTLVTDLNGHVFAWGSNSKGQLGFLSPGTPSTAV 622
Query: 73 -EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKLDLVVHDPH 129
P + L G+ + ++ G +HS A + DG +++WG N G++G EG LD+V P
Sbjct: 623 ETPTVVGDLRGVYMSSVACGEYHSLALSSDGRVFSWGCNKYGKLGRVAEGLLDMV--QPR 680
Query: 130 PMS-----WSEDFDSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
++ W+ + S+ V +A G H+LA+ D + + G + QL GC
Sbjct: 681 HINADWTGWAMETKSRIGSGDRYAVRRIAAGKDHSLAINSDGAGFTWGRGDSGQLGHGC 739
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S P+ + + ++ +ACG H LAL+ +G VFSWG G+LG + G ++
Sbjct: 619 STAVETPTVVGDLRGVYMSSVACGEYHSLALSSDGRVFSWGCNKYGKLGRVAEGLLDMVQ 678
Query: 74 PREIRA---------LSGLG------VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
PR I A S +G V +I+AG HS A DG + WG + GQ+G
Sbjct: 679 PRHINADWTGWAMETKSRIGSGDRYAVRRIAAGKDHSLAINSDGAGFTWGRGDSGQLGHG 738
Query: 119 GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
+D V +P + S+ ++D+A G+ ++ L + + + CG +
Sbjct: 739 CYMD--VSEPKQVMAISATISKECGLIDIAGGNDFSIFLFSNGTAYICGRD 787
>gi|213513384|ref|NP_001134670.1| probable E3 ubiquitin-protein ligase HERC4 [Salmo salar]
gi|209735122|gb|ACI68430.1| Probable E3 ubiquitin-protein ligase HERC4 [Salmo salar]
Length = 358
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR--EIRALSGLGVVQI 88
V I+CG H + L G V++ G+ S+GQLG G P ++ L ++
Sbjct: 176 VVQISCGRSHAIVLDDSGTVYTVGDNSKGQLGV---GMSVKNSPTFVQVTELGWTKCKKV 232
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDV 147
+AGGWH+ + G +Y+WGWN GQ+GV+ +D+ P S D ++ + +VD+
Sbjct: 233 AAGGWHNLVVNESGHVYSWGWNLNGQLGVQS-IDI---SEFPTSIERDENNSVFENIVDI 288
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLS 175
+CG H+ AL + + G N++N+++
Sbjct: 289 SCGCSHSAALSANGQAYLWGSNQFNEIA 316
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 40 HCLALTQEGIVFS-----------WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
HCL + Q G+ S + R L +P+ +DA + E + + VVQI
Sbjct: 122 HCLPILQLGVFGSQLLYVDNNYDAYLKPFRPALTHPTYKSDALLVANE--KGNRIKVVQI 179
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
S G H+ G +Y G N+ GQ+GV K + W+ K
Sbjct: 180 SCGRSHAIVLDDSGTVYTVGDNSKGQLGVGMSVKNSPTFVQVTELGWT--------KCKK 231
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
VA G H L + + ++ GWN QL
Sbjct: 232 VAAGGWHNLVVNESGHVYSWGWNLNGQL 259
>gi|70949528|ref|XP_744165.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524006|emb|CAH74665.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 426
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 20 PSRMDHFLD--LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +++ F + +I CG H LALT+ G V+ G G G+LG + G E +
Sbjct: 178 PKKIEAFNNDNSEFINICCGEQHSLALTKSGKVYGCGKGEFGRLGKGNHGDQLFFEEIDY 237
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-DLVVHDPHPMSWSED 136
+ + + I+ G SAA + +G +Y WG N+ GQ+G+E + DL H+ +P +
Sbjct: 238 FVNNNIIIKDIACGNSFSAALSNNGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNK-VKY 296
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLW 164
F+ +NIK+ +ACG H +A + N ++
Sbjct: 297 FEIENIKIKLIACGDNHMIACSESNIIY 324
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG-----TD 69
+ + P ++ +F + + ++ G +H A +G ++++G +GQLG S +
Sbjct: 57 EKYPFPEKIRNFENKQINKLSAGCNHA-AFIVDGKIYTYGLNDKGQLGRTLSNEGGKESK 115
Query: 70 ANMEPREIRAL-SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
++ P EI + + G H+ A ++ LY+WGW G G ++
Sbjct: 116 ISLTPEEIELDDKSIKFKDVCCGYKHTLAVDENNDLYSWGWGGNFFKGASGLGQGNKNNL 175
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E F++ N + +++ CG +H+LAL ++GCG E+ +L G
Sbjct: 176 MKPKKIEAFNNDNSEFINICCGEQHSLALTKSGKVYGCGKGEFGRLGKG 224
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 18/193 (9%)
Query: 22 RMDHFLD--LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA---NMEPRE 76
+D+F++ +++ DIACG AL+ G V+ WG GQLG +S D + P +
Sbjct: 234 EIDYFVNNNIIIKDIACGNSFSAALSNNGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNK 293
Query: 77 IR--ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
++ + + + I+ G H A ++ +Y W G + +E K + +P +
Sbjct: 294 VKYFEIENIKIKLIACGDNHMIACSESNIIYFW----GSRAWLEPK--AITLNP---KYQ 344
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
+NI V S + L DN L+ W +YN + G + L PE
Sbjct: 345 NSLIKKNIDKVQAGGNSYYYSMLLSDNKLY--SWGKYNSSCLALGDKKNHNEPTLVDPEL 402
Query: 195 VKNCPIVKLFAEH 207
N I + H
Sbjct: 403 FDNEIICDISCGH 415
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 15/141 (10%)
Query: 20 PSRMDHFL--DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P+++ +F ++ + IACG +H +A ++ I++ WG SR L P + T + P+
Sbjct: 291 PNKVKYFEIENIKIKLIACGDNHMIACSESNIIYFWG--SRAWLE-PKAIT---LNPKYQ 344
Query: 78 RALSGLGVVQISAGG--WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+L + ++ AGG ++ + D LY+WG N + + K + H+ + E
Sbjct: 345 NSLIKKNIDKVQAGGNSYYYSMLLSDNKLYSWGKYNSSCLALGDKKN---HNEPTLVDPE 401
Query: 136 DFDSQNIKVVDVACGSRHTLA 156
FD++ I D++CG LA
Sbjct: 402 LFDNEII--CDISCGHGRVLA 420
>gi|328709531|ref|XP_003243987.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Acyrthosiphon pisum]
Length = 505
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG H + T+ IV+ +G+ S GQLG + + P E+ + ++Q+SA
Sbjct: 88 VKHIACGRSHTIVSTENNIVYGFGDNSDGQLGQSVADVTHSDVPIEVTRFNDKNIIQLSA 147
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +H+AA ++G +Y WG N+ Q+G+ D V+ P + V+ V+CG
Sbjct: 148 GSYHTAALLENGDVYVWGSNSDRQLGLNSMDDDSVNVSVPT-----IVPIALPVLYVSCG 202
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
HT + L+ CG EY +L G
Sbjct: 203 HTHTAFVTRIGDLYTCGDREYGKLGHG 229
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +I+CG +H + + G VF +G S GQLG T+ +P +++L V I+
Sbjct: 36 VIEISCGEEHSGIVCKNGRVFCFGKNSFGQLGL--GHTENVYKPNCVKSLKPDKVKHIAC 93
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+ T++ +Y +G N+ GQ+G + V H P+ + F+ +NI + ++ G
Sbjct: 94 GRSHTIVSTENNIVYGFGDNSDGQLG--QSVADVTHSDVPIEVTR-FNDKNI--IQLSAG 148
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
S HT AL ++ ++ G N QL +
Sbjct: 149 SYHTAALLENGDVYVWGSNSDRQLGL 174
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
SR+D +V ++CG +H +AL G VF GN GQ+G + + ++ P I
Sbjct: 234 SRVDTTEKIV--KVSCGANHTIALNDAGKVFVCGNNDCGQIGLRNVTSQGHLYPCPI--- 288
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ 140
+ +VQI G HSA T G L+ G G++G++ V+ + F +
Sbjct: 289 TNEPIVQIVCGQSHSAFITASGKLFMCGDGKYGKLGID------VNQITTPTLVLAFVDK 342
Query: 141 NIKVVDVACGSRHTL 155
N+ V V+CG HTL
Sbjct: 343 NLNVQMVSCGGNHTL 357
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 24/164 (14%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY---PSSGTDANMEPREIRALSGL 83
+ L V ++CG H +T+ G +++ G+ G+LG+ S D +
Sbjct: 192 IALPVLYVSCGHTHTAFVTRIGDLYTCGDREYGKLGHGLWSLSRVDTTEK---------- 241
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
+V++S G H+ A G ++ G N+ GQ+G+ P P++ N
Sbjct: 242 -IVKVSCGANHTIALNDAGKVFVCGNNDCGQIGLRNVTSQGHLYPCPIT--------NEP 292
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
+V + CG H+ + L+ CG +Y +L G V+Q++ T
Sbjct: 293 IVQIVCGQSHSAFITASGKLFMCGDGKYGKL--GIDVNQITTPT 334
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG +H LA T+ G VFSWG G G LG S P + L G+ +V
Sbjct: 172 VRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGES--QDRYLPTRVVGLEGIRMVSAEC 229
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HSA ++DG ++ +GW+ GQ+G D V P ++ ++ ++ VA G
Sbjct: 230 GWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTV--PCQVA-----ALRHTRISSVAGG 282
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
RHT+A +L+G GWN++ QL +G
Sbjct: 283 WRHTMAADSSGNLYGWGWNKFGQLGLG 309
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ F V +ACG H L + EG +F++G GQLG T+ + P+ +
Sbjct: 108 VPRPIEFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGH--TNDCLSPQLVV 165
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G V ++ G HS A T+ G +++WGW G +G D + +
Sbjct: 166 ALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLP-------TRVVG 218
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ I++V CG RH+ + +D ++ GW++Y QL G
Sbjct: 219 LEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHG 257
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
VT ++CG H +A+ GIV SWG G GQLG+ + D + P+ I L+ G+ +
Sbjct: 15 VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQA--DECLAPKAISTLTDAGIESVVC 72
Query: 91 GGWHS-AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G ++ A G +Y+WGW + G++G D+ V P P+ E F + + VAC
Sbjct: 73 GAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFV--PRPI---EFFSGRPVH--RVAC 125
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G HTL + + L+ G N+ QL +G
Sbjct: 126 GDTHTLVVAGEGELFTFGRNQNGQLGLG 153
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
SQ ++P+R+ + + CG+ H ++++G VF++G GQLG+ TD +
Sbjct: 207 SQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDH-TDRTV- 264
Query: 74 PREIRALSGLGVVQISAGGW-HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P ++ AL + + AGGW H+ A G LY WGWN GQ+G+ D P P+
Sbjct: 265 PCQVAALRHTRISSV-AGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSD----RPSPVL 319
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + V CG RHT+A+ + ++ G QL G
Sbjct: 320 VGGALAGQRVSL--VTCGWRHTVAVTEGGRVYSWGRGVNGQLGHG 362
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI- 77
+P ++ ++ +A G+ H +A G ++ WG GQLG D++ P +
Sbjct: 264 VPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGL----GDSSDRPSPVL 319
Query: 78 --RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
AL+G V ++ G H+ A T+ G +Y+WG GQ+G + DL
Sbjct: 320 VGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQDL 367
>gi|356523185|ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Glycine max]
Length = 528
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 85/153 (55%), Gaps = 9/153 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQIS 89
V DIACG H + +T G + ++G G GQ G G +A+ + P + +L G V +I+
Sbjct: 353 VMDIACGGRHSVVITDAGALLTFGWGLYGQCG---QGNNADQLRPTLVPSLLGTRVEKIA 409
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG WH+ + +G +YA+G N GQ+G D P + S F++++ +V +C
Sbjct: 410 AGLWHTLCVSVNGQIYAFGGNQFGQLGTGS--DQPETSPRQLDASR-FENKHSSIV--SC 464
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
G+RH+ L DD L+ GWN+Y QL +G V +
Sbjct: 465 GARHSALLTDDGHLFTWGWNKYGQLGLGDSVDR 497
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIR 78
P+ + L V IA G H L ++ G ++++G GQLG +G+D PR++
Sbjct: 394 PTLVPSLLGTRVEKIAAGLWHTLCVSVNGQIYAFGGNQFGQLG---TGSDQPETSPRQLD 450
Query: 79 A--LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
A +S G HSA T DG L+ WGWN GQ+G+ +D + P +S +
Sbjct: 451 ASRFENKHSSIVSCGARHSALLTDDGHLFTWGWNKYGQLGLGDSVDRNI--PGQVSIA-- 506
Query: 137 FDSQNIKVVDVACGSRHTLALCDDN 161
+ +VACG HTL + D
Sbjct: 507 ----GCRPRNVACGWWHTLLMGDKT 527
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH- 129
+ P + SG+ + ++ GG H+ A + G ++ WG+ GQ+G+ ++ +V PH
Sbjct: 262 TVSPSLVTLASGVKITSVAVGGRHTLALSDVGQVWGWGYGGEGQLGLGSRVKMV-SSPHL 320
Query: 130 -PMSWSEDFDSQNI-----------------KVVDVACGSRHTLALCDDNSLWGCGWNEY 171
P S D + V+D+ACG RH++ + D +L GW Y
Sbjct: 321 IPCIESSGKDKSSAFHQGSGAGAQGSNVTGSYVMDIACGGRHSVVITDAGALLTFGWGLY 380
Query: 172 NQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSV 215
Q G Q+ R ++ + + K+ A W++ +SV
Sbjct: 381 GQCGQGNNADQL----RPTLVPSLLGTRVEKIAAGLWHTLCVSV 420
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 36 CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHS 95
CGF +A++++G + +WG+ Y SG + P + + VV+ +AG H
Sbjct: 106 CGF--AMAISEKGKLITWGSADDEGQSYLISGKHGEI-PGLYQLPTEASVVKAAAGWAHC 162
Query: 96 AARTQDGFLYAWGWNN 111
A+ ++G +YAWGW
Sbjct: 163 ASVNEEGEVYAWGWKE 178
>gi|336116892|ref|YP_004571659.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
gi|334684671|dbj|BAK34256.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
Length = 508
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+ H P + H V IA G LAL ++G V+SWG QLG +G +A+ P
Sbjct: 216 ETRHAPVDVMHLARFGVKAIAAGGWTSLALLKDGTVWSWGANDWRQLGAGDTGFNAHTIP 275
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
++ LSG+ V I GGWHS A +DG +++WG + GQ+G D D + +
Sbjct: 276 VKVEGLSGVTAVDI--GGWHSLALREDGTVWSWGHGHQGQLG-----DGTNSDHNAAAVV 328
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
V V+ G RH+LAL D ++W G+N QL G ++ + + S+
Sbjct: 329 PGLSG----VKAVSAGYRHSLALLRDGTVWSWGYNAQGQLGDGTNTNRNTPVKVASLGGR 384
Query: 195 VK 196
VK
Sbjct: 385 VK 386
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 98/225 (43%), Gaps = 60/225 (26%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL-GVVQIS 89
VT + G H LAL ++G V+SWG+G +GQLG GT+++ + + GL GV +S
Sbjct: 284 VTAVDIGGWHSLALREDGTVWSWGHGHQGQLG---DGTNSDHNAAAV--VPGLSGVKAVS 338
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVG----------------------VEGKLDLVVHD 127
AG HS A +DG +++WG+N GQ+G + V HD
Sbjct: 339 AGYRHSLALLRDGTVWSWGYNAQGQLGDGTNTNRNTPVKVASLGGRVKAIAASSSNVFHD 398
Query: 128 PH---------------PMSWSEDFDSQN------IKVVD------VACGSRHTLALCDD 160
P W + D N +KV D +A G RH+LAL D
Sbjct: 399 PSFSLALLEDGTVWSWGTNDWHQLGDGTNTSRNTPVKVSDLSGVKAIAPGGRHSLALLKD 458
Query: 161 NSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
++WG G N++ Q+ G G R + P ++ VK A
Sbjct: 459 GTVWGWGANDHGQVGTGDGTPD-----RYAAPVKIEGISHVKAIA 498
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 53 WGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN 111
WG G+LG GT+ P + L +GV I GGW S A DG +++WG N+
Sbjct: 150 WGQNDHGELG---DGTNKRRFAPSPMPYLDQVGVSAIDGGGWFSLALLNDGSVWSWGRND 206
Query: 112 GGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEY 171
Q+G K H P + V +A G +LAL D ++W G N++
Sbjct: 207 WAQLGDGTK--ETRHAPVDV-----MHLARFGVKAIAAGGWTSLALLKDGTVWSWGANDW 259
Query: 172 NQLSMG 177
QL G
Sbjct: 260 RQLGAG 265
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA G H LAL ++G V+ WG GQ+G D P +I +S V I+A
Sbjct: 442 VKAIAPGGRHSLALLKDGTVWGWGANDHGQVGTGDGTPDRYAAPVKIEGISH--VKAIAA 499
Query: 91 GGWHSAA 97
GGWHS A
Sbjct: 500 GGWHSIA 506
>gi|330845272|ref|XP_003294517.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
gi|325075008|gb|EGC28958.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
Length = 594
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 7/178 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P+R++H IACG H + ++ G ++++G G+ G+LG +P +
Sbjct: 148 NQPTRINHSDRATFVAIACGSQHSMIVSNFGELYTFGCGTTGRLGLGDE--SPRFKPTVV 205
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L G +V AG HS+ G +Y++GWN GQ+G V P E
Sbjct: 206 SSLVGKQIVSCGAGVMHSSCVDSTGKIYSFGWNRYGQLGTGS----VKSHTLPAKMKETQ 261
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
+ + V V CG HTLAL ++ + G+N QL +G + Q++ T++ E V
Sbjct: 262 ITSKMHFVKVVCGKNHTLALSNNGEMVSFGFNACGQLGVGSHLDQIN-PTKIEFSEKV 318
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 36/242 (14%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA-NMEPREIR 78
P+ + + + G H + G ++S+G GQLG S + + +E +
Sbjct: 202 PTVVSSLVGKQIVSCGAGVMHSSCVDSTGKIYSFGWNRYGQLGTGSVKSHTLPAKMKETQ 261
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
S + V++ G H+ A + +G + ++G+N GQ+GV LD + +P + +SE
Sbjct: 262 ITSKMHFVKVVCGKNHTLALSNNGEMVSFGFNACGQLGVGSHLDQI--NPTKIEFSE--- 316
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
KV+D+A G H+L + D+ + G+ G G+S+ V T + P+ +
Sbjct: 317 ----KVLDIATGYYHSLCVTDNGEAYSWGY----MSDGGLGLSE--VYTHQTKPKLIPLV 366
Query: 199 PIVKLFAE------------HWNSARLSVPEHAK--------DSSIVKLFAGHWNSGILV 238
I F++ N+ ++ H K + K+ AG WNS I+
Sbjct: 367 HIRHTFSDSNDAFDEIYGKGDENTTEETIENHKKYIQDKYSTGDFVEKVGAGAWNSAIIT 426
Query: 239 QS 240
S
Sbjct: 427 SS 428
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S+ +DG +Y+WG+N GQ G G ++V P P+ +S D I + +ACG HT
Sbjct: 64 SSNSNEDGLVYSWGYNYFGQCGNGGNQTIIV--PSPVQFSIDI---KISIKTIACGDSHT 118
Query: 155 LALCDD-NSLWGCGWNEYNQLSMG 177
LA+ ++ L+ G N + QL +G
Sbjct: 119 LAIAENPYGLYSWGCNRWGQLGLG 142
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGF-L 104
++G+V+SWG GQ G + T P + + + I+ G H+ A ++ + L
Sbjct: 69 EDGLVYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIAENPYGL 128
Query: 105 YAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
Y+WG N GQ+G+ +++ + P ++ S+ V +ACGS+H++ + + L+
Sbjct: 129 YSWGCNRWGQLGLGDQINR--NQPTRINHSD-----RATFVAIACGSQHSMIVSNFGELY 181
Query: 165 GCGWNEYNQLSMG 177
G +L +G
Sbjct: 182 TFGCGTTGRLGLG 194
>gi|118375248|ref|XP_001020809.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila]
gi|89302576|gb|EAS00564.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila
SB210]
Length = 4058
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 12/145 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQISAG 91
I+CG +HC A++ G +++WG G +GQLG+ + N+ P +++ L VV +S G
Sbjct: 320 ISCGANHCAAVSLSGKLYTWGQGIQGQLGHQNV---MNLSIPTAVKSELQEKKVVYVSCG 376
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
G H+ T +G+ Y++G N GQ+G+ + V P+ + QN +V+V CG
Sbjct: 377 GAHTVCLTNEGYAYSFGNNKNGQLGLGDQEQRNV----PVKIQK---LQNYFIVNVVCGM 429
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSM 176
+T L ++ CG N++N+L +
Sbjct: 430 NNTFILTQVGKIFACGSNQHNKLGL 454
Score = 77.0 bits (188), Expect = 6e-12, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I C H A+ +G +++WG G GQLG ++ ++ + R L + Q+S G +
Sbjct: 2390 IDCQAQHSAAIQLDGKLYTWGQGLNGQLGI-NAQSNMLLPQRVGGILEQKNITQVSCGVF 2448
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H A T DGF Y WG N GQ+G++ L + +P Q+ ++ V CG +
Sbjct: 2449 HMACITNDGFCYTWGSNTNGQLGLDKDLPQI---NYPCVVER---LQSYFIIQVTCGYNN 2502
Query: 154 TLALCDDNSLWGCGWNEYNQLSM 176
T + L+GCG N++N++ +
Sbjct: 2503 TFFFSQNGRLYGCGSNQHNKIGL 2525
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
+S V +P + VV I CG + CL LT V +WG+ S G +G + D
Sbjct: 244 ISDVVQLPKGIGGRKTFVV-QICCGLNFCLILTYNFQVLAWGDNSYGNIG--TGDLDYQE 300
Query: 73 EPREIRALSGLG----VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
+P+ I+ G + IS G H AA + G LY WG GQ+G + ++L +
Sbjct: 301 KPKIIQFDENKGDDSRIQFISCGANHCAAVSLSGKLYTWGQGIQGQLGHQNVMNLSI--- 357
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P + + Q KVV V+CG HT+ L ++ + G N+ QL +G
Sbjct: 358 -PTAVKSEL--QEKKVVYVSCGGAHTVCLTNEGYAYSFGNNKNGQLGLG 403
Score = 70.5 bits (171), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V+ IACG ++C+A+ V+ WG +GQLG + T + +P E++ L GL + Q++
Sbjct: 2729 VSFIACGAEYCMAIENRRKVYGWGKNDQGQLGIGAISTIVH-KPTEVQGLEGLLMKQVAC 2787
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VAC 149
G H+ +++G +Y+ G G++G+ GK D + P + Q++ +D VAC
Sbjct: 2788 GQVHTLFLSEEGCVYSCGSPTDGKLGL-GKRDAIQLFPMKI--------QSLAKIDKVAC 2838
Query: 150 GSRHTLALCDD 160
G H+LAL +D
Sbjct: 2839 GYTHSLALGED 2849
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 31/195 (15%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY----------PSSGTDANMEPR 75
F+ + DI G H +ALT G ++ WG+ Q G S+ + N+
Sbjct: 578 FISNDIVDIELGVFHTMALTNAGEIYVWGSNQMCQHGCISNIIRQEYDESNEKNINIIQN 637
Query: 76 EIRALSGLGVVQ------------ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
+I + VV I+AG + A +YAWG N GQ+G+ GK
Sbjct: 638 DISKETLPSVVSFFNIKENRRITYIAAGYEYCMAIENKRLVYAWGRNTDGQLGI-GKTQY 696
Query: 124 VVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS-- 181
V P + E N+ + +ACG HTL L D ++ CG ++ +L +G +
Sbjct: 697 YVESPQMVLGLEG----NL-MKAIACGENHTLFLTDTGQVYSCGSSKDGKLGLGNRTNTQ 751
Query: 182 -QVSVMTRLSVPEHV 195
Q ++T LS E +
Sbjct: 752 LQPQLITNLSKVEQI 766
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
+T IA G+++C+A+ + +V++WG + GQLG T +E P+ + L G + I+
Sbjct: 659 ITYIAAGYEYCMAIENKRLVYAWGRNTDGQLGI--GKTQYYVESPQMVLGLEGNLMKAIA 716
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H+ T G +Y+ G + G++G+ + + + + S KV ++C
Sbjct: 717 CGENHTLFLTDTGQVYSCGSSKDGKLGLGNRTNTQLQPQLITNLS--------KVEQISC 768
Query: 150 GSRHTLAL 157
G H++AL
Sbjct: 769 GQSHSMAL 776
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 19 MPSRMDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L+ +T ++CG H +T +G ++WG+ + GQLG N P +
Sbjct: 2427 LPQRVGGILEQKNITQVSCGVFHMACITNDGFCYTWGSNTNGQLGLDKDLPQINY-PCVV 2485
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
L ++Q++ G ++ +Q+G LY G N ++G++
Sbjct: 2486 ERLQSYFIIQVTCGYNNTFFFSQNGRLYGCGSNQHNKIGLD 2526
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 28/174 (16%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQ------------LGYPSSGTDANME 73
F+ D+ G H +ALT G ++ WG+ Q + S N++
Sbjct: 2648 FISSEFVDVQLGTFHSMALTNAGELYIWGSNESSQHAVDDLQIEQAYVDQAISKIKINVQ 2707
Query: 74 PREIRALSGL----------GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
+L L V I+ G + A +Y WG N+ GQ+G+ G +
Sbjct: 2708 TLVTSSLPSLVNFFDIKENRRVSFIACGAEYCMAIENRRKVYGWGKNDQGQLGI-GAIST 2766
Query: 124 VVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+VH P +E + + + VACG HTL L ++ ++ CG +L +G
Sbjct: 2767 IVHKP-----TEVQGLEGLLMKQVACGQVHTLFLSEEGCVYSCGSPTDGKLGLG 2815
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 35/175 (20%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA-N 71
+S + H P+ + L++ +ACG H L L++EG V+S G+ + G+LG DA
Sbjct: 2764 ISTIVHKPTEVQGLEGLLMKQVACGQVHTLFLSEEGCVYSCGSPTDGKLGL--GKRDAIQ 2821
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGF-------------------LYAWGWNNG 112
+ P +I++L+ + +++ G HS A +D + +Y+WG
Sbjct: 2822 LFPMKIQSLAKID--KVACGYTHSLALGEDVYVDEDFDDFNLLQNEFNKKVVYSWGSAYE 2879
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WG 165
++G K +L +P+ + N D+ G H+ A+ +++L WG
Sbjct: 2880 SKLGHGEKENLF--EPNRI-------QANFSFRDIFAGGHHSAAIDKEHNLIVWG 2925
Score = 46.2 bits (108), Expect = 0.011, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++CG H + LT EG +S+GN GQLG + P +I+ L +V +
Sbjct: 370 VVYVSCGGAHTVCLTNEGYAYSFGNNKNGQLGL--GDQEQRNVPVKIQKLQNYFIVNVVC 427
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVE 118
G ++ TQ G ++A G N ++G++
Sbjct: 428 GMNNTFILTQVGKIFACGSNQHNKLGLD 455
Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 24/97 (24%)
Query: 31 VTDIACGFDHCLALTQ------------------EGIVFSWGNGSRGQLGYPSSGTDANM 72
V I+CG H +AL Q + +V++WGN +LG+ G N+
Sbjct: 763 VEQISCGQSHSMALAQDDFFKQDDDEEHARQINVKMVVYTWGNAWESKLGH---GDRENL 819
Query: 73 -EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
EP +I+ S ISAG HSAA T D L WG
Sbjct: 820 YEPTKIQ--SNYLFKYISAGSHHSAALTTDDNLVVWG 854
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P +I
Sbjct: 89 PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCQIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG SSG P +
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTMEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSTHTSA 323
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +LSG
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGK 98
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 99 KIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCQISTNLS--NK 152
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 201
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 MEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
>gi|241121413|ref|XP_002403206.1| regulator of chromosome condensation, putative [Ixodes scapularis]
gi|215493385|gb|EEC03026.1| regulator of chromosome condensation, putative [Ixodes scapularis]
Length = 309
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D V +ACG H L T + V+ +G + QLG S + EP IR+
Sbjct: 49 PKCIKGLKDHRVVLVACGRAHTLVATDDLKVYGFGMNTEHQLGLDSQEFQ-HTEPALIRS 107
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+GL + Q++AG HS A T G + WG GQ+G+ + + P P+ D
Sbjct: 108 LTGLQIKQLAAGAEHSIALTDKGVAFVWGCGKEGQLGLGTRPSV----PEPLELKVD--- 160
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
I+++ V+ G HT + + ++ G QL +G +Q S + PE +K
Sbjct: 161 --IRIMSVSAGYYHTAIVSAEGKVYAFGDGRNGQLGLGNKTTQSSKPQPIPFPEGIKIAR 218
Query: 200 IV 201
+V
Sbjct: 219 VV 220
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 26/171 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P+ + L + +A G +H +ALT +G+ F WG G GQLG GT ++ EP E++
Sbjct: 102 PALIRSLTGLQIKQLAAGAEHSIALTDKGVAFVWGCGKEGQLGL---GTRPSVPEPLELK 158
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+ ++ +SAG +H+A + +G +YA+G GQ+G+ G P P+ + E
Sbjct: 159 V--DIRIMSVSAGYYHTAIVSAEGKVYAFGDGRNGQLGL-GNKTTQSSKPQPIPFPE--- 212
Query: 139 SQNIKVVDVACGSRHTLAL--------------CDDNSLWGCGWNEYNQLS 175
IK+ V CG HT L + L CG + + +L+
Sbjct: 213 --GIKIARVVCGESHTAFLSGKLLVIDGFRSMVVEKRQLLTCGDSRHGKLA 261
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 24/173 (13%)
Query: 47 EGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYA 106
EG FS+G+ GQLG + P+ I+ L VV ++ G H+ T D +Y
Sbjct: 24 EGRAFSFGSNGYGQLGL--GHKNPVTRPKCIKGLKDHRVVLVACGRAHTLVATDDLKVYG 81
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS--LW 164
+G N Q+G++ + + +P + +++ +A G+ H++AL D +W
Sbjct: 82 FGMNTEHQLGLDSQ-EFQHTEPALIR-----SLTGLQIKQLAAGAEHSIALTDKGVAFVW 135
Query: 165 GCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
GCG + QL +G TR SVPE ++ + I+ + A ++++A +S
Sbjct: 136 GCG--KEGQLGLG---------TRPSVPEPLELKVDIRIMSVSAGYYHTAIVS 177
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ +D+ + ++ G+ H ++ EG V+++G+G GQLG + T ++ +P+ I
Sbjct: 151 VPEPLELKVDIRIMSVSAGYYHTAIVSAEGKVYAFGDGRNGQLGLGNKTTQSS-KPQPIP 209
Query: 79 ALSGLGVVQISAGGWHSA 96
G+ + ++ G H+A
Sbjct: 210 FPEGIKIARVVCGESHTA 227
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G+ + IS + +G +++G N GQ+G+ K V P + +D
Sbjct: 5 GVQMASISGKVQQKTRQITEGRAFSFGSNGYGQLGLGHKNP--VTRPKCIKGLKDH---- 58
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+VV VACG HTL DD ++G G N +QL +
Sbjct: 59 -RVVLVACGRAHTLVATDDLKVYGFGMNTEHQLGL 92
>gi|168002036|ref|XP_001753720.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695127|gb|EDQ81472.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 478
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQ-LGYPSSGTDANMEPREIRALSGLGVVQIS 89
VT IACG H +T G + ++G G GQ +G S T+ + P + A+ GL VV I+
Sbjct: 302 VTRIACGGRHSAVITDAGALLTFGWGLYGQQVGQGS--TEDELSPCLVSAMRGLRVVGIA 359
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG WH+ T G +YA+G N GQ+GV G ED S V VAC
Sbjct: 360 AGLWHTLCITDIGDVYAFGGNQFGQLGVGGNTAETSPRLVDAPLLEDETS-----VAVAC 414
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+RH++ L ++ GWN+Y QL +G
Sbjct: 415 GARHSVVLTGSGKIFAWGWNKYGQLGLG 442
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L V IA G H L +T G V+++G GQLG G A PR + A
Sbjct: 344 PCLVSAMRGLRVVGIAAGLWHTLCITDIGDVYAFGGNQFGQLGV--GGNTAETSPRLVDA 401
Query: 80 --LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSWSE 135
L V ++ G HS T G ++AWGWN GQ+G+ DL V +
Sbjct: 402 PLLEDETSVAVACGARHSVVLTGSGKIFAWGWNKYGQLGLGDSNNRDLPV---------Q 452
Query: 136 DFDSQNIKVVDVACGSRHTLA 156
+ + +ACG HTLA
Sbjct: 453 VTMNDGGRAASIACGWWHTLA 473
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 80/206 (38%), Gaps = 37/206 (17%)
Query: 9 PLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQ----------------EGIVFS 52
P VF P + + ++ +A G H LAL+ V+
Sbjct: 197 PTAAEENVFAPPCLVILDPGIRISTVAAGGRHTLALSGMYSFSYDLIFPHFGNIYSHVYG 256
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLG--------------VVQISAGGWHSAAR 98
WG G GQLG S T P+ + S L V +I+ GG HSA
Sbjct: 257 WGYGGEGQLGL-GSRTRIVSTPQRVPCFSSLENGVTIGEASIPGSCVTRIACGGRHSAVI 315
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T G L +GW GQ +G + +S + ++VV +A G HTL +
Sbjct: 316 TDAGALLTFGWGLYGQQVGQGSTE------DELSPCLVSAMRGLRVVGIAAGLWHTLCIT 369
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVS 184
D ++ G N++ QL +G ++ S
Sbjct: 370 DIGDVYAFGGNQFGQLGVGGNTAETS 395
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 9 PLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
P + S + P +M V + CGF +A+++ G + +WG S +LG +
Sbjct: 36 PTPVPSTPLNDPLKM-------VCNGGCGFG--IAISESGKLNTWG--STTELGQCYLIS 84
Query: 69 DANMEPREIRALSGLGVVQISAGGW-HSAARTQDGFLYAWGWN 110
E E +L + +AGGW H AA T DG +Y WGW+
Sbjct: 85 GKQQEVPEPYSLPTESPIIQAAGGWAHCAAVTGDGEVYTWGWS 127
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 77/149 (51%), Gaps = 13/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ G H LAL ++G V+SWG G+LG + P ++ LS V+ ISA
Sbjct: 194 VVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD--VIAISA 251
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG+HS A +DG ++ WG GG + GK+D + P + W KVV +A G
Sbjct: 252 GGFHSIALNKDGAVWIWG---GGIIEKNGKID-NSYIPVRIRWLN-------KVVAIAAG 300
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
RH++AL DD ++W G N Y L G
Sbjct: 301 YRHSIALKDDGTVWVWGHNSYGVLGSNVG 329
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 17/147 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +A G H +ALT+ G +++WGN + GQLG ++ N+ P +++ L VV I+
Sbjct: 344 VVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNL-PYKVKWLD--NVVAIAT 400
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A +DG +++WG NN GQ+G + + S+ V V G
Sbjct: 401 GGSHTLAIKRDGTVWSWGANNKGQLG---------NGTYKSSYIPTCVKGLNNAVLVEAG 451
Query: 151 SRHTLALCDDNSLWGCG-----WNEYN 172
S+H+LA+ D ++W G W+E N
Sbjct: 452 SQHSLAVDKDGTVWVWGFIESVWSEKN 478
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVVQIS 89
V +A G H LAL ++G V+SWG + GQLG +GT + + P ++ L+ VV I+
Sbjct: 596 VVKVAAGKYHSLALKKDGTVWSWGYNAYGQLG---NGTRETSFVPVRVKGLNN--VVAIA 650
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG +HS A +DG ++ WG N GQ+G + P+ E D+ VV +A
Sbjct: 651 AGDYHSMALKKDGTVWVWGSNIRGQLGRRN----IEFSTVPLK-VEKLDN----VVAIAA 701
Query: 150 GSRHTLALCDDNSLWGCG 167
G H++AL D ++W G
Sbjct: 702 GDTHSVALKKDGTVWVWG 719
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 22/148 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA G+ H LA+ +G V+SWG+ + L + + +P +I+ LSG VV+++A
Sbjct: 547 VRSIAAGYFHSLAVRTDGTVWSWGDTN---LDNKKKYLNFSEKPVKIKGLSG--VVKVAA 601
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK----VVD 146
G +HS A +DG +++WG+N GQ+G + F +K VV
Sbjct: 602 GKYHSLALKKDGTVWSWGYNAYGQLGNGTR-------------ETSFVPVRVKGLNNVVA 648
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
+A G H++AL D ++W G N QL
Sbjct: 649 IAAGDYHSMALKKDGTVWVWGSNIRGQL 676
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 15/139 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVVQISAGGWHSAAR 98
H LA+ +G V++WG GQLG +GT + P ++ L VV +SAG +HS A
Sbjct: 53 HTLAIKDDGTVWAWGYNGFGQLG---NGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLAL 107
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
+DG ++ WG N GQ K D+ P+ E +NI V +A G +LA+
Sbjct: 108 KKDGSVWIWGHTNYGQ----RKSDVYRDFTTPVKVKE---LKNI--VAIAAGWDFSLAVG 158
Query: 159 DDNSLWGCGWNEYNQLSMG 177
D S+W G N + +L +G
Sbjct: 159 SDGSVWAWGINNHGELGIG 177
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP--REIRALSGLGVVQI 88
+T+IA G D+ L L ++G ++ GN Y TD+++ + IR + V I
Sbjct: 496 ITEIAGGLDYILVLRKDGNIWGCGNDF-----YFRKFTDSSVSSVTKLIRLDNIKNVRSI 550
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK----V 144
+AG +HS A DG +++WG N ++ K + P+ IK V
Sbjct: 551 AAGYFHSLAVRTDGTVWSWGDTN-----LDNKKKYLNFSEKPV---------KIKGLSGV 596
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V VA G H+LAL D ++W G+N Y QL G
Sbjct: 597 VKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNG 629
Score = 44.7 bits (104), Expect = 0.038, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 16/125 (12%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+ AG H+ A DG ++AWG+N GQ+G D + P + +D V
Sbjct: 44 VISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCI--PVRVKGLKD-------V 94
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLF 204
V V+ G+ H+LAL D S+W G Y Q + V + P VK +
Sbjct: 95 VAVSAGTFHSLALKKDGSVWIWGHTNYGQ-------RKSDVYRDFTTPVKVKELKNIVAI 147
Query: 205 AEHWN 209
A W+
Sbjct: 148 AAGWD 152
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S++ +N KV+ GS HTLA+ DD ++W G+N + QL G
Sbjct: 34 SKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNG 77
>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
Kuenenia stuttgartiensis]
Length = 620
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 14/155 (9%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G ++ +AL+ +G V +WG S GQLG + TD N P +I +L + ISAG
Sbjct: 265 ISAGGEYSIALSSDGSVLTWGANSDGQLG--NGNTDQNSVPTKISSLPLM--KGISAGEA 320
Query: 94 HSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC-GS 151
HS A T+DGF+YAWG N+ GQ+G E D V +P Q + +D C G+
Sbjct: 321 HSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNP--------VQVQGLTDIDAVCAGA 372
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
+LAL D +W G N+ QL G + + +
Sbjct: 373 TFSLALGIDGRVWAWGLNDEGQLGDGTNTNSTTPV 407
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
++ +ACG DH LA+ + G V SWG GQLG S T ++ P ++ LS +V ++A
Sbjct: 415 ISAVACGSDHSLAI-RNGKVKSWGLNDEGQLGDGS--TRSSSAPLDVTGLSD--IVYVAA 469
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVG 116
G HS A T G +Y WG N GQ+G
Sbjct: 470 GESHSLAITSKGNIYVWGLNGDGQLG 495
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVVQ 87
+V I+ G+ H LAL EG +++WG GQLG GT D+ P ++ + +
Sbjct: 155 VVTPQISGGWSHSLALDSEGKLWAWGLNEDGQLG---DGTNDSQTTPVAVQINALTTITA 211
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+ GG HS A G ++AWG+N G++G G + + P P+ D ++ +
Sbjct: 212 VDCGGDHSMALDSLGRVWAWGYNGDGELG-GGTTENNSNVPVPVPVPNLTD-----IIAI 265
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVK 202
+ G +++AL D S+ G N QL G + SVP + + P++K
Sbjct: 266 SAGGEYSIALSSDGSVLTWGANSDGQLGNGN-------TDQNSVPTKISSLPLMK 313
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Query: 56 GSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
G++ Q G+ +P+ G+ QIS G HS A +G L+AWG N GQ+
Sbjct: 129 GTQPQPGFSPRPRPTGTQPQPA-PTPGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQL 187
Query: 116 GVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
G +G +D + ++ I VD CG H++AL +W G+N +L
Sbjct: 188 G-DG-----TNDSQTTPVAVQINALTTITAVD--CGGDHSMALDSLGRVWAWGYNGDGEL 239
Query: 175 SMGC 178
G
Sbjct: 240 GGGT 243
>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
Length = 376
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T IACG H LALT+EG V SWG+G GQLG SS P EI AL+ +V I++
Sbjct: 247 ITQIACGGYHSLALTEEGKVLSWGHGGHGQLG--SSSLRNQKVPTEIEALADKKIVFIAS 304
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG SAA T G L+ WG Q+GV G ++ +E+ + Q KV+ ++ G
Sbjct: 305 GGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIG 364
Query: 151 SRHTLAL 157
+ H L L
Sbjct: 365 ASHALCL 371
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 10/146 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+PS++ L + V ++CG +ALT+EG +++WG S +LG + EP +
Sbjct: 184 VPSKVKA-LTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDN--LGGWEPMPVP 240
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+L G+ + QI+ GG+HS A T++G + +WG GQ+G + V +E
Sbjct: 241 SLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVP-------TEIEA 293
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLW 164
+ K+V +A G + A+ D LW
Sbjct: 294 LADKKIVFIASGGSSSAAITDGGELW 319
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 3/159 (1%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ F + + IA G H +ALT +G VF+WG G G LG+ + + PR +
Sbjct: 73 VPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRE--LVPRRVD 130
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+ I+ G H+AA T+ G LY WG G + ++ +S
Sbjct: 131 DSWDCKISAIATSGTHTAAITESGELYMWGREE-GDGRLGLGPGRGPNEGGGLSVPSKVK 189
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + V V+CG T+AL + LW G N +L G
Sbjct: 190 ALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG 228
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME----- 73
+P R+D D ++ IA H A+T+ G ++ WG G N
Sbjct: 125 VPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSV 184
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P +++AL+ + V +S GG+ + A T++G L+ WG N+ ++G L +P P+
Sbjct: 185 PSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLG--GWEPMPVP- 240
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +++ +ACG H+LAL ++ + G + QL
Sbjct: 241 ----SLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQL 277
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 22/185 (11%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT------DAN 71
P R+D I+CG H LT +G ++ WG G G+LG+ + +
Sbjct: 21 QTPGRIDADSSSFRIGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPL 79
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
E IR I+ GG HS A T G ++ WG+ G +G + +V P +
Sbjct: 80 FEEHSIRC--------IALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELV--PRRV 129
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
DS + K+ +A HT A+ + L+ G E + + LSV
Sbjct: 130 D-----DSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSV 184
Query: 192 PEHVK 196
P VK
Sbjct: 185 PSKVK 189
>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
Length = 1009
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/148 (36%), Positives = 76/148 (51%), Gaps = 16/148 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG + S+ T P + LSG+ +V
Sbjct: 124 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTST-----PEIVENLSGVPLV 178
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QISAG HS A + G +Y+WG N+ GQ+G+ ++ S E D Q KV
Sbjct: 179 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGH-----TYNKDSPSCIETLDDQ--KVEF 231
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ACG HT L ++ G +Y QL
Sbjct: 232 LACGGCHTALLTKSGLVFTFGDGKYGQL 259
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ D V +ACG H LT+ G+VF++G+G GQLG+ S T + PR +
Sbjct: 218 PSCIETLDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNS--TQNELRPRLVTG 275
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
L G V QI+ G H+ A D G ++++G GQ+G G + ++ P PM
Sbjct: 276 LVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLI--PRPM 326
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P +++ + + I+ G H +AL+ G V+SWG GQLG G N + P I
Sbjct: 166 PEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGL---GHTYNKDSPSCIE 222
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L V ++ GG H+A T+ G ++ +G GQ+G H+
Sbjct: 223 TLDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLG---------HNSTQNELRPRLV 273
Query: 139 SQNI--KVVDVACGSRHTLA-LCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+ + +V +ACG +HTLA + D ++ G + QL G +Q+
Sbjct: 274 TGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQL 321
>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 445
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T IACG H LALT+EG V SWG+G GQLG SS P EI AL+ +V I++
Sbjct: 316 ITQIACGGYHSLALTEEGKVLSWGHGGHGQLG--SSSLRNQKVPTEIEALADKKIVFIAS 373
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG SAA T G L+ WG Q+GV G ++ +E+ + Q KV+ ++ G
Sbjct: 374 GGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIG 433
Query: 151 SRHTLAL 157
+ H L L
Sbjct: 434 ASHALCL 440
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS++ L + V ++CG +ALT+EG +++WG S +LG + EP
Sbjct: 251 LSVPSKVKA-LTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDN--LGGWEPMP 307
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ +L G+ + QI+ GG+HS A T++G + +WG GQ+G + V +E
Sbjct: 308 VPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVP-------TEI 360
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLW 164
+ K+V +A G + A+ D LW
Sbjct: 361 EALADKKIVFIASGGSSSAAITDGGELW 388
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 3/159 (1%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ F + + IA G H +ALT +G VF+WG G G LG+ + + PR +
Sbjct: 142 VPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRE--LVPRRVD 199
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+ I+ G H+AA T+ G LY WG G + ++ +S
Sbjct: 200 DSWDCKISAIATSGTHTAAITESGELYMWGREE-GDGRLGLGPGRGPNEGGGLSVPSKVK 258
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + V V+CG T+AL + LW G N +L G
Sbjct: 259 ALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG 297
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME----- 73
+P R+D D ++ IA H A+T+ G ++ WG G E
Sbjct: 194 VPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGR-EEGDGRLGLGPGRGPNEGGGLS 252
Query: 74 -PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P +++AL+ + V +S GG+ + A T++G L+ WG N+ ++G L +P P+
Sbjct: 253 VPSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLG--GWEPMPVP 309
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
E +++ +ACG H+LAL ++ + G + QL
Sbjct: 310 SLE-----GVRITQIACGGYHSLALTEEGKVLSWGHGGHGQL 346
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 75/189 (39%), Gaps = 22/189 (11%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT------DAN 71
P R+D I+CG H LT +G ++ WG G G+LG+ + +
Sbjct: 90 QTPGRIDADSSSFRIGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPL 148
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
E IR I+ GG HS A T G ++ WG+ G +G + +V P +
Sbjct: 149 FEEHSIRC--------IALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELV--PRRV 198
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
DS + K+ +A HT A+ + L+ G E + + LSV
Sbjct: 199 D-----DSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSV 253
Query: 192 PEHVKNCPI 200
P VK +
Sbjct: 254 PSKVKALTV 262
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 37/168 (22%)
Query: 50 VFSWGNGSRGQLG--------YPSSGTDANM------------EPREIRALSGLGVVQIS 89
+FSWG G+ GQLG YPS AN+ P I A S + IS
Sbjct: 50 LFSWGRGASGQLGGGIEEIRMYPSP--VANLLFRSDQSFSLAQTPGRIDADSSSFRIGIS 107
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G +HS T DG L+ WG +GG++G + + V + +P+ F+ +I+ +A
Sbjct: 108 CGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPL-----FEEHSIRC--IAL 159
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
G H++AL ++ G+ + L V TR VP V +
Sbjct: 160 GGLHSVALTHQGDVFTWGYGGFGALGH-------KVYTRELVPRRVDD 200
>gi|356551654|ref|XP_003544189.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 477
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
LA G + Q F +P + IACG H +T G + ++G G GQ G
Sbjct: 283 LARGNMDSEGQTFRVPGSY-------IKRIACGGRHSAVITDAGALLTFGWGLYGQCG-- 333
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
TD + P + ++ G+ + +++AG WH+ + DG +YA+G N GQ+G D
Sbjct: 334 QGITDDELSPTCVSSILGIHIERVAAGLWHTVCTSADGDVYAFGENQFGQLGT--GADQA 391
Query: 125 VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P + S D N++ +++CG+RHT + + ++ GWN+Y QL +G
Sbjct: 392 ETLPRLLD-SPSLD--NLRAKNISCGARHTALVTEGGKVFCWGWNKYGQLGLG 441
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPR--E 76
P+ + L + + +A G H + + +G V+++G GQLG +G D A PR +
Sbjct: 343 PTCVSSILGIHIERVAAGLWHTVCTSADGDVYAFGENQFGQLG---TGADQAETLPRLLD 399
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+L L IS G H+A T+ G ++ WGWN GQ+G+ +D + +
Sbjct: 400 SPSLDNLRAKNISCGARHTALVTEGGKVFCWGWNKYGQLGLGDVIDRNI--------PSE 451
Query: 137 FDSQNIKVVDVACGSRHTLALCD 159
+ +VACG HTL L +
Sbjct: 452 VIIEGCVPKNVACGWWHTLLLAE 474
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 23/118 (19%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS------WSE 135
G+ + ++AGG H+ A + G ++AWG+ GQ+G+ ++ + V PH + +S+
Sbjct: 219 GIRIASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSRIRM-VSTPHLVPCIDSSYYSK 277
Query: 136 D----------------FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D F + +ACG RH+ + D +L GW Y Q G
Sbjct: 278 DRSATLARGNMDSEGQTFRVPGSYIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 75/200 (37%), Gaps = 36/200 (18%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWG----NGSRG 59
++ SG + F +P+ + A G+ HC+A+T+ G V++WG S
Sbjct: 82 YVTSGKHGETPEPFPLPTEAS------IVKAAAGWAHCVAVTEHGAVYTWGWKECIPSGR 135
Query: 60 QLGYPSSG--------------TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
G PS+G + + PR + S G ++G + R
Sbjct: 136 VFGEPSTGVSLEKDVPGRHSQVSTEQVSPRSQGSRSTGGTASSNSGEESTKRRRVSSAKQ 195
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
++ + LV +P I++ VA G RHTLAL D +W
Sbjct: 196 TAESSSSSDDSLTAFPCLVTLNP------------GIRIASVAAGGRHTLALSDTGLVWA 243
Query: 166 CGWNEYNQLSMGCGVSQVSV 185
G+ QL +G + VS
Sbjct: 244 WGYGGEGQLGLGSRIRMVST 263
>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 388
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 18/205 (8%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H P + F ++ +ACG H +ALT G SWG G+ GQLG+ ++ + P+ +
Sbjct: 40 HFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSGQLGHGEVVSN-TLYPKAV 98
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH-DPHPMSWSED 136
+L G + +SAG HS + GF++ G + GQ+ G D H P +S D
Sbjct: 99 TSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQL---GHGDNASHCSPVKVSCFVD 155
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV- 195
+ V VACG RH+L L N ++G G + QL GVS V + ++VP+ V
Sbjct: 156 -----LHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQL----GVSNDRVKS-VNVPKVVS 205
Query: 196 --KNCPIVKLFAEHWNSARLSVPEH 218
+ IV A +SA +SV H
Sbjct: 206 GFEGVEIVGTAANGDHSAAVSVDGH 230
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 47/243 (19%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ F+DL V +ACG H L L + V+ +G+G RGQLG + + P+ +
Sbjct: 147 PVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSG 206
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAW---------------------------GWNNG 112
G+ +V +A G HSAA + DG +Y W GWN+
Sbjct: 207 FEGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKGFEDAHVPQCLNSSLNFTKVALGWNHA 266
Query: 113 GQVGVEGKLDLV----------VHDPHPMSWSEDFDSQNI---------KVVDVACGSRH 153
+ EG++ ++ + + P D N+ K+ D+A G+ H
Sbjct: 267 LAMSGEGEVYMLGGNHLGVLSDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEH 326
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARL 213
++ + + + GW E+ QL +G Q S +T +S+ + +++F + +
Sbjct: 327 SVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVT-VSLDYDLNEAASIRVFCGSGFTFAV 385
Query: 214 SVP 216
++P
Sbjct: 386 TMP 388
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP--- 74
H+P ++ L+ T +A G++H LA++ EG V+ G G L + A P
Sbjct: 245 HVPQCLNSSLNF--TKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAKHFPDLR 302
Query: 75 ----REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
++ L G + I+AG HS T+ G + WGW GQ+G+ D P
Sbjct: 303 EFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRD----QTSP 358
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALC 158
++ S D+D + V CGS T A+
Sbjct: 359 VTVSLDYDLNEAASIRVFCGSGFTFAVT 386
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 28/182 (15%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
++ MPS +T IACG H LA+ Q+G +++WG GQLG+ T + PR
Sbjct: 48 IYSMPS---------ITTIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKT--HKLPR 96
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ AL ++ +AGG HS T+ +YA+G N GQ+G+E K+ S +
Sbjct: 97 RVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQLGLESKVK--------YSAAP 148
Query: 136 DFDSQNIK--VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
D S+ + V + CG H++AL L+ G N+ QL +G S VPE
Sbjct: 149 DIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYRSS-------PVPE 201
Query: 194 HV 195
H+
Sbjct: 202 HL 203
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 15/146 (10%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RAL--SGLGVVQISAG 91
ACG H +ALT+EG V+SWG + G LG+ +S + + P+ + R L S + I+ G
Sbjct: 4 ACGKLHTVALTEEGRVYSWGC-ANGALGHGNS--KSQLLPKALDRPLIYSMPSITTIACG 60
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV-VDVACG 150
+H+ A QDG L+ WG N GQ+ G D H ++ K+ + A G
Sbjct: 61 EFHTLAVGQDGTLWTWGRNQYGQL---GHGDCKTHK-----LPRRVEALEKKICIKAAAG 112
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
+H+L L + N ++ G N + QL +
Sbjct: 113 GQHSLVLTEANKVYAFGSNVFGQLGL 138
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQE----GI-----VFSWGNGSRGQLGYPSSGTD 69
+P + F V I+CG+DH +A E G+ V++WG G GQLG+
Sbjct: 199 VPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHDE--LY 256
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+ P+ ++ L G+ ++AGG+ SAA + LY WG + GQ+G
Sbjct: 257 SRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCSREGQLG 303
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
V + G H+ A T++G +Y+WG NG K L+ P + +
Sbjct: 1 VGAACGKLHTVALTEEGRVYSWGCANGALGHGNSKSQLL-----PKALDRPLIYSMPSIT 55
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ACG HTLA+ D +LW G N+Y QL G
Sbjct: 56 TIACGEFHTLAVGQDGTLWTWGRNQYGQLGHG 87
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 18/148 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA G DH LALT++G V+SWG SRGQLG + D P+ + +S + I+A
Sbjct: 1188 VAAIAAGEDHSLALTRDGSVWSWGRNSRGQLGLDDN--DDRNTPQPVTTIS--NIKAIAA 1243
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK----VVD 146
G HS A +++G +AWG+N GQ+G+ G + ++ P Q +K VV
Sbjct: 1244 GNSHSFAISEEGLAWAWGYNYDGQLGI-GTSGSLANENTP---------QKVKVISNVVG 1293
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
++ G+ H+LAL +D +LW G N+ Q+
Sbjct: 1294 LSGGNYHSLALTEDGALWAWGDNDDGQI 1321
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 18/161 (11%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P +++ ++V IA G+ H LALT++G V+SWGN +RGQLG + D P+ +
Sbjct: 688 NTPRKVNAISNVVA--IAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDN--DDRNTPQPV 743
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+S + + + G +S A +++G ++AWG+N GQ+G+ H E+
Sbjct: 744 TTISNIKAIAV--GNNYSIAISEEGLVWAWGYNCSGQLGIG---------THGSLADENT 792
Query: 138 DSQNI---KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
+ I VV ++ GS H++AL +D +LW G NE Q++
Sbjct: 793 PQKVIVISNVVGLSAGSSHSIALTEDGALWAWGNNEAGQIA 833
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 14/160 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREI 77
P+++D IA G +H LAL +G V+SWG S GQLG SSGT P++I
Sbjct: 1025 TPTKVDALP--PAAKIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKI 1082
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
A+S V I+ GG HS A +DG L++WG+N GQ+G + D + + +
Sbjct: 1083 NAIS--NVAAIACGGSHSLAVARDGSLWSWGYNYYGQLG--------LGDNYSKTTPQKV 1132
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ + V +A G ++LAL D S+W G N QL +G
Sbjct: 1133 NAIS-NVAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLG 1171
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 17/166 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA G + LALT++G V+SWG+ S GQLG + D N P+++ LS V I+A
Sbjct: 1138 VAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDN-EDRNT-PQKVEVLS--NVAAIAA 1193
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A T+DG +++WG N+ GQ+G++ D + P P++ NIK +A G
Sbjct: 1194 GEDHSLALTRDGSVWSWGRNSRGQLGLDDNDDR--NTPQPVT-----TISNIKA--IAAG 1244
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
+ H+ A+ ++ W G+N QL +G S + + P+ VK
Sbjct: 1245 NSHSFAISEEGLAWAWGYNYDGQLGIGTSGS----LANENTPQKVK 1286
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG H LAL ++G +SWG GQLG + + PR++ ALS VV ++A
Sbjct: 599 VAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVS--KTTPRKVNALSN--VVAMAA 654
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A T DG L++WG N GQ+G+ G D H P + VV +A G
Sbjct: 655 GDRHSLALTLDGSLWSWGDNTYGQLGL-GDND---HRNTPRKVN-----AISNVVAIAAG 705
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
RH+LAL D S+W G N QL +G
Sbjct: 706 YRHSLALTRDGSVWSWGNNTRGQLGLG 732
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 14/170 (8%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G L + V R + L VV +A G H LALT +G ++SWG+ + GQLG +
Sbjct: 627 GQLGLGDNVSKTTPRKVNALSNVVA-MAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDN- 684
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
D PR++ A+S VV I+AG HS A T+DG +++WG N GQ+G+ D +
Sbjct: 685 -DHRNTPRKVNAISN--VVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDR--NT 739
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P P++ NIK + A G+ +++A+ ++ +W G+N QL +G
Sbjct: 740 PQPVT-----TISNIKAI--AVGNNYSIAISEEGLVWAWGYNCSGQLGIG 782
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T IA G H +AL ++G V++WG GQLG+ T P+ +S L V A
Sbjct: 269 ITAIAAGRRHAMALAEDGSVWAWGANGSGQLGFGDFET-----PKAPGRVSSLADVTAIA 323
Query: 91 GGW-HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GW HS A T DG L+AWG N G++G + D + P + S V A
Sbjct: 324 SGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQSL--PAQV-------SSISNAVSFAG 374
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
G RH+LA+ D S+W G N Y QL + ++ SV+T +
Sbjct: 375 GQRHSLAIAADGSVWSWGGNAYGQLGVES-LTPASVLTPV 413
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 13/146 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG H LA+ ++G ++SWG GQLG + + P+++ A+S V I+A
Sbjct: 1088 VAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYS--KTTPQKVNAIS--NVAAIAA 1143
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G ++S A T+DG +++WG N+ GQ+G+ D + P + + V +A G
Sbjct: 1144 GEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDR--NTPQKVEVLSN-------VAAIAAG 1194
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+LAL D S+W G N QL +
Sbjct: 1195 EDHSLALTRDGSVWSWGRNSRGQLGL 1220
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
PS+ D+ IA G H LA TQ G V++ G GQLG+ DA P ++
Sbjct: 159 TPSKTPGLSDVAA--IAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDHADA---PVQVA 213
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
LS V ++AG + S A DG ++AWG N Q+G G V P P++ +
Sbjct: 214 GLS--NVKSVAAGEFFSLALKNDGTVWAWGNNESAQLGT-GIAGEAVATPAPIAVLSN-- 268
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +A G RH +AL +D S+W G N QL G
Sbjct: 269 -----ITAIAAGRRHAMALAEDGSVWAWGANGSGQLGFG 302
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGS-RGQLGYPSSGTDANMEPREI 77
P+ +D + IA G H LAL +G V+SWG S P++I
Sbjct: 536 TPTNVDALP--LAASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKI 593
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
A+S V I+ GG HS A +DG ++WG+N GQ+G+ + P ++ +
Sbjct: 594 NAIS--NVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTT--PRKVNALSN- 648
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
VV +A G RH+LAL D SLW G N Y QL +G
Sbjct: 649 ------VVAMAAGDRHSLALTLDGSLWSWGDNTYGQLGLG 682
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
+ IA G H A+++EG+ ++WG GQLG +SG+ AN P++++ +S VV +S
Sbjct: 1238 IKAIAAGNSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKVISN--VVGLS 1295
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEG 119
G +HS A T+DG L+AWG N+ GQ+G G
Sbjct: 1296 GGNYHSLALTEDGALWAWGDNDDGQIGSTG 1325
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+A G + LAL +G ++SWG+ GQLG + P ++ AL +I+AG
Sbjct: 986 VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP--AAKIAAGDN 1043
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD----VAC 149
H+ A DG +++WG+N+ GQ+G+ ++S Q I + +AC
Sbjct: 1044 HALALAPDGSVWSWGYNSDGQLGLGSS----------GTYSTKNRPQKINAISNVAAIAC 1093
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G H+LA+ D SLW G+N Y QL +G S+ +
Sbjct: 1094 GGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTT 1128
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 13/127 (10%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME- 73
+ P R+ D VT IA G+ H LALT +G++++WGN G+L GTDA +
Sbjct: 305 ETPKAPGRVSSLAD--VTAIASGWFHSLALTSDGVLWAWGNNGDGRL-----GTDATSDQ 357
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP-HP 130
P ++ ++S V + G HS A DG +++WG N GQ+GVE V P H
Sbjct: 358 SLPAQVSSIS--NAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLGVESLTPASVLTPVHT 415
Query: 131 MSWSEDF 137
+ EDF
Sbjct: 416 LYSGEDF 422
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
+ IA G ++ +A+++EG+V++WG GQLG + G+ A+ P+++ +S VV +S
Sbjct: 749 IKAIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKVIVISN--VVGLS 806
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
AG HS A T+DG L+AWG N GQ+ E ++ +
Sbjct: 807 AGSSHSIALTEDGALWAWGNNEAGQIAAEEAIEYI 841
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+A G LAL +G V+SWGN GQLG D P + AL I+AGG
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPL--AASIAAGGG 554
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD----VAC 149
H+ A DG +++WG N+ GQ+G+ ++S + Q I + +AC
Sbjct: 555 HALALASDGSVWSWGRNSVGQLGLGTG----------GTYSTENRPQKINAISNVAAIAC 604
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G H+LAL D S W G+N Y QL +G VS+ +
Sbjct: 605 GGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTT 639
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +A G LAL +G +++WG GQLG + D + P + LS V I+
Sbjct: 119 IVSVAAGRLFSLALASDGSLWAWGGNYYGQLGMGDN--DNRLTPSKTPGLSD--VAAIAG 174
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +H+ A TQ G ++A G N+ GQ+G G H P+ + N+K V A G
Sbjct: 175 GDYHALAATQSGEVWAMGRNDHGQLGFTGD-----HADAPVQVAG---LSNVKSV--AAG 224
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
+LAL +D ++W G NE QL G V+ ++V ++
Sbjct: 225 EFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLSNI 269
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQISAGG 92
+A DH LAL +G V+ WG QLG G D N + P + +S +V ++AG
Sbjct: 72 VASRLDHSLALKGDGTVWVWGRNDYNQLGL---GDDINRLAPEQAPVVSN--IVSVAAGR 126
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
S A DG L+AWG N GQ+G+ + + P V +A G
Sbjct: 127 LFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGL---------SDVAAIAGGDY 177
Query: 153 HTLALCDDNSLWGCGWNEYNQLSM 176
H LA +W G N++ QL
Sbjct: 178 HALAATQSGEVWAMGRNDHGQLGF 201
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A DG ++ WG N+ Q+G+ ++ + + P+ +V VA G
Sbjct: 78 HSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVV---------SNIVSVAAGRLF 128
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
+LAL D SLW G N Y QL MG
Sbjct: 129 SLALASDGSLWAWGGNYYGQLGMG 152
>gi|70919024|ref|XP_733311.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56504990|emb|CAH83572.1| hypothetical protein PC300577.00.0 [Plasmodium chabaudi chabaudi]
Length = 205
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 20 PSRMDHFLD--LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P +++ F + +I CG H LALT+ G V+ G G G+LG + G E +
Sbjct: 43 PKKIEAFNNDNSEFINICCGEQHSLALTKSGKVYGCGKGEFGRLGKGNHGDQLFFEEIDY 102
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-DLVVHDPHPMSWSED 136
+ + + I+ G SAA + +G +Y WG N+ GQ+G+E + DL H+ +P +
Sbjct: 103 FVNNNIIIKDIACGNSFSAALSNNGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNK-VKY 161
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLW 164
F+ +NIK+ +ACG H +A + N ++
Sbjct: 162 FEIENIKIKLIACGDNHMIACSESNIIY 189
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 36 CGFDHCLALTQEGIVFSW---GNGSRGQLGYPSSGTDANMEPREIRALSGLG--VVQISA 90
CG+ H LA+ + ++SW GN +G G + M+P++I A + + I
Sbjct: 2 CGYKHTLAVDENNDLYSWGWGGNFFKGASGLGQGNKNNLMKPKKIEAFNNDNSEFINICC 61
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A T+ G +Y G G++G D + + + F + NI + D+ACG
Sbjct: 62 GEQHSLALTKSGKVYGCGKGEFGRLGKGNHGDQLFFEE-----IDYFVNNNIIIKDIACG 116
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
+ + AL ++ ++ G N+Y QL +
Sbjct: 117 NSFSAALSNNGEVYVWGRNDYGQLGI 142
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ A ++ LY+WGW G G ++ E F++ N + +++ CG +H
Sbjct: 6 HTLAVDENNDLYSWGWGGNFFKGASGLGQGNKNNLMKPKKIEAFNNDNSEFINICCGEQH 65
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
+LAL ++GCG E+ +L G
Sbjct: 66 SLALTKSGKVYGCGKGEFGRLGKG 89
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 21 SRMDHFLD--LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA---NMEPR 75
+D+F++ +++ DIACG AL+ G V+ WG GQLG +S D + P
Sbjct: 98 EEIDYFVNNNIIIKDIACGNSFSAALSNNGEVYVWGRNDYGQLGIENSIGDLYSHEVYPN 157
Query: 76 EIR--ALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+++ + + + I+ G H A ++ +Y WG
Sbjct: 158 KVKYFEIENIKIKLIACGDNHMIACSESNIIYFWG 192
>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Homo sapiens]
Length = 310
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLG----LGNSGNQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD 308
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +L+G
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGK 98
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 152
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 201
>gi|170067991|ref|XP_001868696.1| NIMA-family kinase NERCC1 [Culex quinquefasciatus]
gi|167864123|gb|EDS27506.1| NIMA-family kinase NERCC1 [Culex quinquefasciatus]
Length = 738
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 10/217 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H P++++ V A G L T G+V S G+ + G LG+ T + + P+ +
Sbjct: 451 HYPTKIESIRRYNVVGAATGNGFTLLWTDLGVVLSCGDNTEGCLGH--GNTISLLIPKIV 508
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ + +VQI+ G H A + +G L+ WG +N G +G+ GK L ++P + S+
Sbjct: 509 HKLTNMRIVQIACGEHHVVALSDEGDLFTWGTSNEGALGL-GKHMLSSNEPRRLIVSQMI 567
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS-VPEHVK 196
QNI+ ++CG T+ L D + CG N +N+L G +SQ+ + ++S + + V
Sbjct: 568 --QNIR--QISCGPDCTVVLTDGGFCYCCGSNGFNKLGFGAKLSQLHGLQKVSFITQKVL 623
Query: 197 NCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHWN 233
+ + FA V A D+S +L GH N
Sbjct: 624 AVSVAETFAAFLIEGGYVVT--AGDNSSGQLGLGHTN 658
>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
Length = 1345
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
H LALT G VFSWG+G G+LG+ +S D PR+I AL G VV ++ G HSA T
Sbjct: 584 HSLALTDSGEVFSWGDGDYGKLGHGNS--DRQRRPRQIEALRGEEVVNMACGFKHSAVVT 641
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLAL-C 158
DG L+ +G + G++G + P ++ E + VACG HTL L
Sbjct: 642 VDGKLFTFGNGDYGRLGHGNSAN--KKTPERVTALEKH-----AIGQVACGLNHTLVLSA 694
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVS 184
D N++W G +Y +L +G ++ S
Sbjct: 695 DGNTVWAFGDGDYGKLGLGSCTAKTS 720
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ + +ACG +H L L+ +G V+++G+G G+LG S A P+ I
Sbjct: 668 PERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSC--TAKTSPQAID 725
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L+G+G +I G S T DG ++++G Q + G+ + + P +
Sbjct: 726 VLAGIGCKKICCGTQFSVVLTNDGRVFSFG-----QERLTGQPEGRLRGPQKPQQIQALA 780
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S I DV G+ H LAL +WG G N QL +G
Sbjct: 781 SHFID--DVCVGAEHVLALTSTGEVWGWGNNVDGQLGLG 817
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG 84
HF+D D+ G +H LALT G V+ WGN GQLG S +A EP I L G
Sbjct: 782 HFID----DVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGHS--NAQREPCVIPDLKGKN 835
Query: 85 VVQISAGGWHSAA 97
+ QISAG HSAA
Sbjct: 836 IRQISAGRNHSAA 848
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA--- 90
+ CG + + G + + G GS G+LG +S + P I AL G V+QI+
Sbjct: 523 VVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSP--ISALQGYVVIQIATSRG 580
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
HS A T G +++WG + G++G G D P + +VV++ACG
Sbjct: 581 SDGHSLALTDSGEVFSWGDGDYGKLG-HGNSD---RQRRPRQIEA---LRGEEVVNMACG 633
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+H+ + D L+ G +Y +L G
Sbjct: 634 FKHSAVVTVDGKLFTFGNGDYGRLGHG 660
>gi|374993251|ref|YP_004968750.1| cell wall binding protein [Desulfosporosinus orientis DSM 765]
gi|357211617|gb|AET66235.1| putative cell wall binding protein [Desulfosporosinus orientis DSM
765]
Length = 731
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 13/143 (9%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++ G + LA+ +G V++WG+ S GQLG T+ + P +++ L+ V+ +SAGG
Sbjct: 50 LSAGLNFSLAVDADGNVWAWGDNSEGQLGQGDVDTNPVVSPVKVKGLTD--VISVSAGGV 107
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVACGSR 152
H+ A DG ++AWG N Q+GVE P++ DS QNI V +A G
Sbjct: 108 HALALKADGTVWAWGNNEYDQLGVE--------QSSPITLPRQIDSLQNI--VGIAAGLE 157
Query: 153 HTLALCDDNSLWGCGWNEYNQLS 175
LAL + +W G NEY Q++
Sbjct: 158 SNLALDNQGQVWAWGGNEYQQVN 180
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ G H LAL +G V++WGN QLG S PR+I +L +V I+A
Sbjct: 99 VISVSAGGVHALALKADGTVWAWGNNEYDQLGVEQSSPIT--LPRQIDSLQ--NIVGIAA 154
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVAC 149
G + A G ++AWG N Q V DL + DP ++ N+ VV +A
Sbjct: 155 GLESNLALDNQGQVWAWGGNEYQQ--VNNTDDLKISDPQIVN--------NLSGVVKIAL 204
Query: 150 GSRHTLALCDDNSLWGCG 167
GS +LAL +D ++W G
Sbjct: 205 GSAWSLALKNDGTVWTWG 222
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 13/102 (12%)
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL-VVHDPHPMSWSEDFDSQNIKVV 145
Q+SAG S A DG ++AWG N+ GQ+G +G +D V P + D V+
Sbjct: 49 QLSAGLNFSLAVDADGNVWAWGDNSEGQLG-QGDVDTNPVVSPVKVKGLTD-------VI 100
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
V+ G H LAL D ++W G NEY+QL GV Q S +T
Sbjct: 101 SVSAGGVHALALKADGTVWAWGNNEYDQL----GVEQSSPIT 138
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 12/148 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+ GF H LAL +G V+ WG+ QLG ++ P +I +++ V +SA
Sbjct: 251 VVSISAGFSHSLALKNDGTVWGWGSNEVLQLG--NTEQPWFDSPVQISSIN--NAVSVSA 306
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI-KVVDVAC 149
G + S A +DG ++ G N GGQ+G + P+ + NI KV ++
Sbjct: 307 GAYLSMALGKDGSVWTLGANGGGQLGSGSSSSNLPASAAPLK------AANISKVSAISA 360
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G LA S+WG G N QL G
Sbjct: 361 GYGFALA-GTAGSVWGWGDNTKGQLGSG 387
>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
gallopavo]
Length = 537
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI-RALSGLGVVQI 88
V ++ACG H +AL+ +G +++WG + GQ+G SG+ AN PR + L VV I
Sbjct: 136 VIEVACGSHHSMALSFDGDLYAWGYNNCGQVG---SGSTANQPTPRRVSNCLQDKMVVGI 192
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ ++ + ++ + ++ +A
Sbjct: 193 ACGQTSSMAVVNNGEVYGWGYNGNGQLGLG-------NNGNQLTPCRVAALHGVCILQIA 245
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
CG HTLAL D+ L+ G N Y QL G +Q+S + + E V
Sbjct: 246 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERV 292
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
SQ +P +++ ++ ++ G H L T++G V++WG+ QLG + T+ +
Sbjct: 65 SQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLG--NGATNQGV 122
Query: 73 EPREI-RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P ++ L V++++ G HS A + DG LYAWG+NN GQVG + P P
Sbjct: 123 TPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGS----TANQPTPR 178
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S Q+ VV +ACG ++A+ ++ ++G G+N QL +G +Q++
Sbjct: 179 RVSNCL--QDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLT 229
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
Query: 20 PSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ + L D +V IACG +A+ G V+ WG GQLG ++G + P +
Sbjct: 177 PRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQ--LTPCRVA 234
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ ++QI+ G H+ A T +G LYAWG N GQ+G K + + P + ++
Sbjct: 235 ALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQL--SPLQIMMEKE-- 290
Query: 139 SQNIKVVDV-ACGSRHTLA 156
+VV++ AC S HT A
Sbjct: 291 ----RVVEIAACHSAHTSA 305
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ + + IACG+ H LALT EG++++WG + GQLG +G +N + P +I
Sbjct: 230 PCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPLQIM 286
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ VV+I+A SAA+TQ G +Y WG G V
Sbjct: 287 -MEKERVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSV 324
>gi|449447434|ref|XP_004141473.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Cucumis sativus]
Length = 485
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 86/164 (52%), Gaps = 23/164 (14%)
Query: 26 FLD-----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRA 79
FLD + +T ++CG H A+++ G V++WG GS GQLG+ S D + PR + A
Sbjct: 218 FLDEAPELVTITKVSCGEYHSAAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVA 277
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSED 136
L G+ V I+ GG H+ A TQ+G LYAWG GQ+GV G + D SE
Sbjct: 278 LDGICVKDIACGGVHTCAITQNGSLYAWGGGQVGQLGVGPQTGFFSCIAGD------SET 331
Query: 137 FDSQNIKVV-------DVACGSRHTLALCDDNSLWGCGWNEYNQ 173
F +N+ VV VACG HTL D + G G+N Y Q
Sbjct: 332 F-LRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIHGWGYNSYGQ 374
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 105/248 (42%), Gaps = 51/248 (20%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
DH P ++ +F P ++ DIACG +H A+ +G +F+WG GQLG
Sbjct: 38 DHQLRVPRQLHPDLFGCPGEINSRW----LDIACGREHTAAVASDGSLFTWGANDFGQLG 93
Query: 63 YPSSGTDANME-PREIRALSGLGVVQISAGGWHSAA----RTQDGF-----LYAWGWNNG 112
GT+ + P+++ L G V +S G +AA R DG L+ WG N G
Sbjct: 94 ---DGTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTCRLWIWGQNQG 150
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
P + F Q I + V+CG+ H +AL DD L G+NEY
Sbjct: 151 SNF--------------PRLFWGAFTPQTI-IRQVSCGAVHVVALSDDGQLQAWGYNEYG 195
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHW 232
QL G E ++ I+ FA+ + A PE +I K+ G +
Sbjct: 196 QLGRGV------------TSEGLQGARIINAFAKFLDEA----PELV---TITKVSCGEY 236
Query: 233 NSGILVQS 240
+S + ++
Sbjct: 237 HSAAISEN 244
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG------- 82
++ ++CG H +AL+ +G + +WG GQLG + ++ R I A +
Sbjct: 166 IIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVT-SEGLQGARIINAFAKFLDEAPE 224
Query: 83 -LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
+ + ++S G +HSAA +++G +Y WG + GQ+G L D +
Sbjct: 225 LVTITKVSCGEYHSAAISENGEVYTWGLGSMGQLG---HCSLQSADKELIP-RRVVALDG 280
Query: 142 IKVVDVACGSRHTLALCDDNSLW 164
I V D+ACG HT A+ + SL+
Sbjct: 281 ICVKDIACGGVHTCAITQNGSLY 303
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSW-GNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + V DIACG H A+TQ G +++W G P +G + +
Sbjct: 271 IPRRVVALDGICVKDIACGGVHTCAITQNGSLYAWGGGQVGQLGVGPQTGFFSCIAGDSE 330
Query: 78 RALSGLGVVQISAGGWHSA-------ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
L L VV +S G H A T+DG ++ WG+N+ GQ E P P
Sbjct: 331 TFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIHGWGYNSYGQAANEKS--TYAWYPSP 388
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ W +V +A G H+ L D SL
Sbjct: 389 VDWCVG------EVRKLAAGGGHSAVLTDACSL 415
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDP---HPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
+Y WG+N GQ G +GK D + P HP + + N + +D+ACG HT A+ D
Sbjct: 21 IYVWGYNQSGQTGRKGK-DHQLRVPRQLHPDLFGCPGEI-NSRWLDIACGREHTAAVASD 78
Query: 161 NSLWGCGWNEYNQLSMG 177
SL+ G N++ QL G
Sbjct: 79 GSLFTWGANDFGQLGDG 95
>gi|330796023|ref|XP_003286069.1| hypothetical protein DICPUDRAFT_86979 [Dictyostelium purpureum]
gi|325083977|gb|EGC37416.1| hypothetical protein DICPUDRAFT_86979 [Dictyostelium purpureum]
Length = 1029
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG------YPSSGTDANM 72
+P ++ F ++ V+ I+CG +H L L ++G V+SWGN G+LG + SS
Sbjct: 278 LPLKIHSFQNICVSQISCGSNHVLCLNKQGQVYSWGNTEHGKLGHGDDFTFVSSNAKFIN 337
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P+ I++L ++ IS G H T+D + WG + GQ+G + D + P+ +
Sbjct: 338 YPKRIKSLEATPIISISCGYSHCMVLTKDSGIMTWGKGSDGQLGTGHRHD--IWSPYEIK 395
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALC-DDNSLWGCGW 168
FD K+V ++CG ++ + + L+ GW
Sbjct: 396 RVIGFDE---KIVQISCGYFNSFFITLEKRELYSFGW 429
Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 25/179 (13%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
++ + P R+ + I+CG+ HC+ LT++ + +WG GS GQLG +G ++
Sbjct: 333 AKFINYPKRIKSLEATPIISISCGYSHCMVLTKDSGIMTWGKGSDGQLG---TGHRHDIW 389
Query: 73 EPREIRALSGLG--VVQISAGGWHSAART-QDGFLYAWGWNNGGQVGVE-GKLD------ 122
P EI+ + G +VQIS G ++S T + LY++GW G+ GKLD
Sbjct: 390 SPYEIKRVIGFDEKIVQISCGYFNSFFITLEKRELYSFGW------GITLGKLDDQLLPT 443
Query: 123 -LVVHDPHPMSWSEDFDSQN----IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ +P + + D+D N K+ V+ G HTL L ++ + G E+ QL +
Sbjct: 444 KFIFQEPLESTNNSDYDEINGNPKYKIKQVSSGYSHTLILNENGECFSLGQGEFGQLGI 502
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGS-RGQLGYPSSGTDANMEPRE------IRALSGL 83
+ ++CG +H LAL+ G ++SWG+ + GQLG+ S + +P+ I+AL+G
Sbjct: 38 IVQLSCGSNHSLALSDGGDLYSWGSTNLNGQLGHGDSKS-LYEKPKNIKKFSLIKALNGD 96
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
+Q+S G S T G +YAWG N GQ+ +
Sbjct: 97 SPIQVSTGLDFSFILTDQGSIYAWGSNIEGQLAL 130
Score = 45.4 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 12/129 (9%)
Query: 51 FSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWN 110
+ WG S G Y EP I L+ +VQ+S G HS A + G LY+WG
Sbjct: 13 YCWGRDSHGNKTY---------EPEIIPELNNKFIVQLSCGSNHSLALSDGGDLYSWGST 63
Query: 111 N-GGQVGVEGKLDLVVHDPHPMSWSEDFDSQN-IKVVDVACGSRHTLALCDDNSLWGCGW 168
N GQ+G G + P + + N + V+ G + L D S++ G
Sbjct: 64 NLNGQLG-HGDSKSLYEKPKNIKKFSLIKALNGDSPIQVSTGLDFSFILTDQGSIYAWGS 122
Query: 169 NEYNQLSMG 177
N QL++G
Sbjct: 123 NIEGQLALG 131
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANME-PREIRALSGLGV 85
+ ++ G+ H L L + G FS G G GQLG +PS D+ ++ P I L V
Sbjct: 470 IKQVSSGYSHTLILNENGECFSLGQGEFGQLGIPQDHPSISNDSFLKSPVLIEKLLPYYV 529
Query: 86 VQISAGGWHSAA 97
+ G WHS A
Sbjct: 530 ESVQCGRWHSLA 541
>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
Length = 537
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI-RALSGLGVVQI 88
V ++ACG H +AL+ +G +++WG + GQ+G SG+ AN PR + L VV I
Sbjct: 136 VIEVACGSHHSMALSFDGDLYAWGYNNCGQVG---SGSTANQPTPRRVSNCLQDKMVVGI 192
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ ++ + ++ + ++ +A
Sbjct: 193 ACGQTSSMAVVNNGEVYGWGYNGNGQLGLG-------NNGNQLTPCRVAALHGVCILQIA 245
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
CG HTLAL D+ L+ G N Y QL G +Q+S + + E V
Sbjct: 246 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERV 292
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
SQ +P +++ ++ ++ G H L T++G V++WG+ QLG + T+ +
Sbjct: 65 SQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLG--NGATNQGV 122
Query: 73 EPREI-RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P ++ L V++++ G HS A + DG LYAWG+NN GQVG + P P
Sbjct: 123 TPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGS----TANQPTPR 178
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S Q+ VV +ACG ++A+ ++ ++G G+N QL +G +Q++
Sbjct: 179 RVSNCL--QDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLT 229
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
Query: 20 PSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ + L D +V IACG +A+ G V+ WG GQLG ++G + P +
Sbjct: 177 PRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGN--QLTPCRVA 234
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ ++QI+ G H+ A T +G LYAWG N GQ+G K + + P + ++
Sbjct: 235 ALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQL--SPLQIMMEKE-- 290
Query: 139 SQNIKVVDV-ACGSRHTLA 156
+VV++ AC S HT A
Sbjct: 291 ----RVVEIAACHSAHTSA 305
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ + + IACG+ H LALT EG++++WG + GQLG +G +N + P +I
Sbjct: 230 PCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPLQIM 286
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ VV+I+A SAA+TQ G +Y WG G V
Sbjct: 287 -MEKERVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSV 324
>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
Length = 1874
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
H LALT+ G VFSWG+G G+LG+ +S D PR+I AL G V+QI+ G HSA T
Sbjct: 1087 HSLALTESGEVFSWGDGDYGKLGHGNS--DRQRRPRQIEALQGEEVIQIACGFKHSAVVT 1144
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
DG L +G + G++G L V + P +N + VACG HT+ +
Sbjct: 1145 VDGKLLTFGNGDYGRLG----LGTVCNRKTPERVKA---LENYHIGHVACGLNHTVCVSA 1197
Query: 160 DNS-LWGCGWNEYNQLSMG 177
D S W G +Y +L +G
Sbjct: 1198 DGSTTWAFGDGDYGKLGLG 1216
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ + + +ACG +H + ++ +G +++G+G G+LG T A P +I
Sbjct: 1171 PERVKALENYHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGL--GNTSAKSTPVKIE 1228
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN-GGQVGVEGKLDLVVHDPHPMSWSEDF 137
ALSGL V +++ G S A T+DGF+ WG + GQ E ++ + + F
Sbjct: 1229 ALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRLIGQ--TEAQMRGHCTPQKVTTLAGHF 1286
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG--CGVSQVSVMTRLSVPEHV 195
+ +V GS HTLAL D ++WG G N QL +G V + ++ L E +
Sbjct: 1287 ------IEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVREPQLLGGLGSSEPI 1340
Query: 196 KNCPIVKLFAEHWNSAR 212
K + + W+ A+
Sbjct: 1341 KQISAGRTHSAAWSGAK 1357
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI--SAG 91
I CG + + G V + G GS G+LG +S D + AL G V Q+ S G
Sbjct: 1026 IICGQNCTFVIQANGTVLACGEGSYGRLGQGNS--DDLHSLTIVSALQGFVVTQLVTSVG 1083
Query: 92 G-WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
HS A T+ G +++WG + G++G G D P Q +V+ +ACG
Sbjct: 1084 SDGHSLALTESGEVFSWGDGDYGKLG-HGNSD---RQRRPRQIEA---LQGEEVIQIACG 1136
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
+H+ + D L G +Y +L +G +V R PE VK
Sbjct: 1137 FKHSAVVTVDGKLLTFGNGDYGRLGLG------TVCNR-KTPERVK 1175
>gi|449481389|ref|XP_004156168.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Cucumis sativus]
Length = 485
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 86/164 (52%), Gaps = 23/164 (14%)
Query: 26 FLD-----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRA 79
FLD + +T ++CG H A+++ G V++WG GS GQLG+ S D + PR + A
Sbjct: 218 FLDEAPELVTITKVSCGEYHSAAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVA 277
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSED 136
L G+ V I+ GG H+ A TQ+G LYAWG GQ+GV G + D SE
Sbjct: 278 LDGICVKDIACGGVHTCAITQNGSLYAWGGGQVGQLGVGPQTGFFSCIAGD------SET 331
Query: 137 FDSQNIKVV-------DVACGSRHTLALCDDNSLWGCGWNEYNQ 173
F +N+ VV VACG HTL D + G G+N Y Q
Sbjct: 332 F-LRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIHGWGYNSYGQ 374
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 105/248 (42%), Gaps = 51/248 (20%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
DH P ++ +F P ++ DIACG +H A+ +G +F+WG GQLG
Sbjct: 38 DHQLRVPRQLHPDLFGCPGEINSRW----LDIACGREHTAAVASDGSLFTWGANDFGQLG 93
Query: 63 YPSSGTDANME-PREIRALSGLGVVQISAGGWHSAA----RTQDGF-----LYAWGWNNG 112
GT+ + P+++ L G V +S G +AA R DG L+ WG N G
Sbjct: 94 ---DGTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTRRLWIWGQNQG 150
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
P + F Q I + V+CG+ H +AL DD L G+NEY
Sbjct: 151 SNF--------------PRLFWGAFTPQTI-IRQVSCGAVHVVALSDDGQLQAWGYNEYG 195
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHW 232
QL G E ++ I+ FA+ + A PE +I K+ G +
Sbjct: 196 QLGRGV------------TSEGLQGARIINAFAKFLDEA----PELV---TITKVSCGEY 236
Query: 233 NSGILVQS 240
+S + ++
Sbjct: 237 HSAAISEN 244
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG------- 82
++ ++CG H +AL+ +G + +WG GQLG + ++ R I A +
Sbjct: 166 IIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVT-SEGLQGARIINAFAKFLDEAPE 224
Query: 83 -LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
+ + ++S G +HSAA +++G +Y WG + GQ+G L D +
Sbjct: 225 LVTITKVSCGEYHSAAISENGEVYTWGLGSMGQLG---HCSLQSADKELIP-RRVVALDG 280
Query: 142 IKVVDVACGSRHTLALCDDNSLW 164
I V D+ACG HT A+ + SL+
Sbjct: 281 ICVKDIACGGVHTCAITQNGSLY 303
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSW-GNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + V DIACG H A+TQ G +++W G P +G + +
Sbjct: 271 IPRRVVALDGICVKDIACGGVHTCAITQNGSLYAWGGGQVGQLGVGPQTGFFSCIAGDSE 330
Query: 78 RALSGLGVVQISAGGWHSA-------ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
L L VV +S G H A T+DG ++ WG+N+ GQ E P P
Sbjct: 331 TFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIHGWGYNSYGQAANEKS--TYAWYPSP 388
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ W +V +A G H+ L D SL
Sbjct: 389 VDWCVG------EVRKLAAGGGHSAVLTDACSL 415
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDP---HPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
+Y WG+N GQ G +GK D + P HP + + N + +D+ACG HT A+ D
Sbjct: 21 IYVWGYNQSGQTGRKGK-DHQLRVPRQLHPDLFGCPGEI-NSRWLDIACGREHTAAVASD 78
Query: 161 NSLWGCGWNEYNQLSMG 177
SL+ G N++ QL G
Sbjct: 79 GSLFTWGANDFGQLGDG 95
>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
Length = 390
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G +K +S P R+ ++ + IA G H LAL +EG V++WGN GQLG +
Sbjct: 184 GDIKQIS----TPVRVQGLENVQL--IAVGAFHNLALLEEGEVWAWGNNEYGQLG--TGD 235
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVV 125
T +P ++ LSGL + I+AGGWHS A T D +YAWG G++G + +V
Sbjct: 236 TQPRSQPVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLGFGDDKSSKMVP 295
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ--- 182
H ++ + V+CG H++A D ++ G ++ +L G V+
Sbjct: 296 QKVHLLA--------GETIAQVSCGGTHSVARTADGRIFSYGRADHGRLGYGRKVTTGHP 347
Query: 183 VSVMTRLSVPEHVKN---CPIVKLFA 205
+ V + P++ C VKL A
Sbjct: 348 MEVPIGIRPPKNAAENSGCWFVKLVA 373
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P + L++ DIA G H ALT + V++WG G G+LG+ + M
Sbjct: 236 TQPRSQPVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLGF-GDDKSSKMV 294
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHD 127
P+++ L+G + Q+S GG HS ART DG ++++G + G++G K +++ +
Sbjct: 295 PQKVHLLAGETIAQVSCGGTHSVARTADGRIFSYGRADHGRLGYGRKVTTGHPMEVPIGI 354
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
P + +E+ +K+ VACG RHTLA
Sbjct: 355 RPPKNAAENSGCWFVKL--VACGGRHTLA 381
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 48/194 (24%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G + LA+ ++G +F+WG RG LG+P + P +++AL + +VQ +
Sbjct: 42 VVSVVAGSRNSLAICEDGQLFTWGWNQRGTLGHPPE-SKTESTPTQVKALENVKIVQAAI 100
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD---------------------------- 122
GGWH A G YAWG N GQ G E +
Sbjct: 101 GGWHCLAVDDQGQAYAWGGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAA 160
Query: 123 ------LVVHDPHPMSWSEDFDSQNIKVVD-------------VACGSRHTLALCDDNSL 163
++ H+ H +W + + +IK + +A G+ H LAL ++ +
Sbjct: 161 GGTHSVVLTHNGHVWTWGQPWPPGDIKQISTPVRVQGLENVQLIAVGAFHNLALLEEGEV 220
Query: 164 WGCGWNEYNQLSMG 177
W G NEY QL G
Sbjct: 221 WAWGNNEYGQLGTG 234
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPRE----IRALSGLG--VVQISAGGWHSAARTQDGF 103
V +WG+G GQLG NME ++ I+AL+ G VV + AG +S A +DG
Sbjct: 7 VLAWGSGEDGQLGV------GNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQ 60
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS---QNIKVVDVACGSRHTLALCDD 160
L+ WGWN G +G H P + S +N+K+V A G H LA+ D
Sbjct: 61 LFTWGWNQRGTLG---------HPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQ 111
Query: 161 NSLWGCGWNEYNQ 173
+ G NEY Q
Sbjct: 112 GQAYAWGGNEYGQ 124
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 19/168 (11%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
K+L + +P R L V +A G H + LT G V++WG +P
Sbjct: 137 KVLRRDIAIPQRC--APQLRVRQVAAGGTHSVVLTHNGHVWTWGQP------WPPGDIKQ 188
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
P ++ L + + I+ G +H+ A ++G ++AWG N GQ+G D P
Sbjct: 189 ISTPVRVQGLENVQL--IAVGAFHNLALLEEGEVWAWGNNEYGQLG--------TGDTQP 238
Query: 131 MSWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S + + D+A G H+ AL D ++ G E+ +L G
Sbjct: 239 RSQPVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLGFG 286
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 101 DGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
D + AWG GQ+GV G ++ D + + S +VV V GSR++LA+C+D
Sbjct: 4 DHAVLAWGSGEDGQLGV-GNME----DKDWVCSIQALASHGKRVVSVVAGSRNSLAICED 58
Query: 161 NSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
L+ GWN+ L S T++ E+VK
Sbjct: 59 GQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVK 94
>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
magnipapillata]
Length = 2284
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 80/153 (52%), Gaps = 15/153 (9%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G HCLAL+ +G VFSWG G G+LG+ + T + +P+ I G + I AGG HSA
Sbjct: 1537 GGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSS--QPKRIEFFCGKIITNICAGGSHSA 1594
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RHT 154
A +G LY WG G++G D + P + + F V+DVACGS T
Sbjct: 1595 AIGLNGELYTWGKGRYGRLGHGDSDDQL--KPKQVEALQFF-----FVLDVACGSGDAQT 1647
Query: 155 LALCDDNSLWGCGWNEYNQL----SMGCGVSQV 183
L + +D+++W G +Y +L S GC V +
Sbjct: 1648 LCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMI 1680
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 13/153 (8%)
Query: 29 LVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L+VT ++ G +H +ALT +G+ FSWG+G GQLG+ + + + +P I A G V
Sbjct: 644 LIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCS--KPHLIEAFVGKIVT 701
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
IS G HSAA ++ +LY WG + G++G G + ++ + F N VV
Sbjct: 702 DISCGSAHSAAIVENKYLYTWGLGDFGRLG-HGDEETILQP----KFVTHFLGYN--VVQ 754
Query: 147 VACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
V+CGSR T+ + DD+ +W G ++ +L G
Sbjct: 755 VSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRG 787
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P ++ L + I CG +ALT+ G V++WG G +LG+ GTD ++ +P+ +
Sbjct: 794 IPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGH---GTDIHVRQPKLV 850
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ G H A TQDG +++WG N+ GQ+G G+ D V P+ ++
Sbjct: 851 EGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGT-GETD-VKKVPNLIT----- 903
Query: 138 DSQNIKVVDVACGSRHTLA 156
N ++ VACGS H++A
Sbjct: 904 GLHNHRIKYVACGSSHSIA 922
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 83/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ F+ +VTDI+CG H A+ + +++WG G G+LG+ T ++P+ +
Sbjct: 689 PHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEETI--LQPKFVTH 746
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
G VVQ+S G + T D +++WG + G++G G ++ P+ +
Sbjct: 747 FLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCLI----PVEVEQ-- 800
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ +++ + CG++ T+AL ++W G ++ +L G +
Sbjct: 801 -LRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTDI 842
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + HFL V ++CG + +T + V+SWG+G G+LG G++ + P E+
Sbjct: 741 PKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLG--RGGSERCLIPVEV 798
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L GL + +I G + A T+ G ++ WG + ++G D+ V P + E
Sbjct: 799 EQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLG--HGTDIHVRQPKLV---EGL 853
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ V+D+A G+ H LA+ D ++ G N++ QL G
Sbjct: 854 RGKH--VIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTG 891
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 19/169 (11%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q P R++ F ++T+I G H A+ G +++WG G G+LG+ S D ++P
Sbjct: 1567 QTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDS--DDQLKP 1624
Query: 75 REIRALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEG----KLDLVVHDP 128
+++ AL V+ ++ +G + T D +++WG + G++G G K+ +++
Sbjct: 1625 KQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMII--- 1681
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
ED + I V V CGS+ ++AL L+ G +Y +L G
Sbjct: 1682 ------EDLSGKGI--VKVECGSQFSMALTKYGVLYTWGKGDYYRLGHG 1722
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ DH L IA G +T +G ++S G S G+LG T PR +
Sbjct: 582 PTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESSFGKLGI-GDITGNVTSPRLVTG 640
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ L V ++S +GG H A T DG ++WG GQ+G G L + PH + E F
Sbjct: 641 LNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLG-HGNL-MSCSKPHLI---EAF 695
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V D++CGS H+ A+ ++ L+ G ++ +L G
Sbjct: 696 VGK--IVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHG 733
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
+ + CG +ALT+ G++++WG G +LG+ GT+ ++ P + AL V IS
Sbjct: 1689 IVKVECGSQFSMALTKYGVLYTWGKGDYYRLGH---GTEEHVRRPMMVTALFNKIVTSIS 1745
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H T +G +Y WG N+ GQ+G +G + + P ++ N K+ ++C
Sbjct: 1746 CGSLHCVVCTDEGEVYCWGDNDEGQLG-DGTI-IARQTPTLNTF-----LLNKKIDRISC 1798
Query: 150 GSRHTLA 156
GS HT+A
Sbjct: 1799 GSAHTIA 1805
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V DIA G HCLA+TQ+G VFSWG+ GQLG + TD P I L + ++
Sbjct: 858 VIDIAVGALHCLAVTQDGEVFSWGDNDHGQLG--TGETDVKKVPNLITGLHNHRIKYVAC 915
Query: 91 GGWHSAARTQ 100
G HS A T+
Sbjct: 916 GSSHSIAWTE 925
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +VT I+CG HC+ T EG V+ WG+ GQLG A P
Sbjct: 1730 PMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLG--DGTIIARQTPTLNTF 1787
Query: 80 LSGLGVVQISAGGWHSAA 97
L + +IS G H+ A
Sbjct: 1788 LLNKKIDRISCGSAHTIA 1805
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 23 MDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG 82
+D+ L I C D T +VF+ G G+ GQLG S T + PR + ++
Sbjct: 1471 IDNLLKEHNVKIDC--DTVCITTDGALVFATGYGNNGQLGLGYSETVTS--PRLLESIKH 1526
Query: 83 LGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVG 116
+ + +IS +GG H A + DG +++WG G++G
Sbjct: 1527 INIKKISVHSGGRHCLALSSDGEVFSWGEGEDGKLG 1562
>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P + L L V + CG H LT G +F+WG G G+LG+ G +E PR I
Sbjct: 262 PVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGH---GNREGLESPRRIE 318
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ VQ++ G ++AA T G LY WG G++G+ V D H S E
Sbjct: 319 ALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGD-----VADRHTPSRVEGLH 373
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
S KV +V GS H+ L + +++ G +EY
Sbjct: 374 S---KVKEVYAGSVHSCVLTREGTVYAFGKHEYT 404
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 13/153 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANME-------PREIRALSGLGV 85
+ G H +ALT +G V++WG+ QLG +S T NME P+ + +L G+ +
Sbjct: 434 VGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNI 493
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF----DSQN 141
V++ AG HSAA T DG LY G N GQ+G+ G + + DF Q+
Sbjct: 494 VKVVAGWGHSAALTVDGQLYVCGRNYQGQLGL-GSPQGFPQNERGHPFQADFCLIDRLQH 552
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+K+ +ACG H++A+ ++ +W G + QL
Sbjct: 553 LKIKQIACGGEHSVAVAENGEVWSFGAGQKGQL 585
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 23/173 (13%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPRE 76
H PSR++ L V ++ G H LT+EG V+++G Y G + ++PR
Sbjct: 364 HTPSRVEG-LHSKVKEVYAGSVHSCVLTREGTVYAFGKHE-----YTGHGDHEDVLDPRL 417
Query: 77 IRALSG-----LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
I SG + + + GG+H+ A T G +YAWG N Q+G+ + P M
Sbjct: 418 IPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTV----PRNM 473
Query: 132 SWSEDFDSQNI-------KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ S + +V V G H+ AL D L+ CG N QL +G
Sbjct: 474 EGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLG 526
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 27/154 (17%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIR 78
P ++ + + + + G+ H ALT +G ++ G +GQLG S G N +
Sbjct: 482 PQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQ 541
Query: 79 A-------LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
A L L + QI+ GG HS A ++G ++++G GQ+G H
Sbjct: 542 ADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLG------------HES 589
Query: 132 SWSEDF-------DSQNIKVVDVACGSRHTLALC 158
+ EDF S +++ VACG+ TL L
Sbjct: 590 TTREDFPRLVQALKSTRREIMHVACGNNCTLVLA 623
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+++ P ++ L GL V Q+ GG H+A T G ++ WG G++G + L P
Sbjct: 258 SDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGL--ESPR 315
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ E I V VACG +T A+ L+ G E +L +G
Sbjct: 316 RIEALE-----GIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLG 358
>gi|326436402|gb|EGD81972.1| hypothetical protein PTSG_02656 [Salpingoeca sp. ATCC 50818]
Length = 5125
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 72/139 (51%), Gaps = 12/139 (8%)
Query: 36 CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RALSGLGVVQISAGGWH 94
DH LALT G V+SWG+ S QLG D + P +I R +V ++ GG H
Sbjct: 137 AAIDHVLALTTRGEVYSWGSNSYAQLGR----NDDPIVPTKITRGFGRSSIVYVAVGGQH 192
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC--GSR 152
SAA ++DG LY WG + G++G G D V P P+ S++I + VAC G
Sbjct: 193 SAAVSEDGVLYTWGRGSYGRLG-HGTSDDVAF-PQPVLA---LKSKDILIATVACGIGDA 247
Query: 153 HTLALCDDNSLWGCGWNEY 171
HTLAL D ++ G +Y
Sbjct: 248 HTLALSRDGVIYAFGDGDY 266
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 7 SGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS 66
SGPLK L + H P V D+A G H L +T++ + G G G+LG +
Sbjct: 3135 SGPLKRL--LPHGPK---------VVDVAYGGYHTLVVTEDHRLLVCGTGKNGKLGLRDT 3183
Query: 67 GTDANMEPREIRALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
+++ P + GL V++++ G HSAA T G LY WG N+ G++G+ + D
Sbjct: 3184 RDQSSLVP-----VPGLRDVLRVACGRRHSAAVTATGQLYMWGCNHHGRLGLGDQND--- 3235
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLW--GCG 167
+ V VACG RHTL L ++ GCG
Sbjct: 3236 ------RYEPTLVPNLPPVQMVACGDRHTLVLTQRGGVYSFGCG 3273
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG----LGVVQIS 89
+A G H A++++G++++WG GS G+LG+ +S D P+ + AL + V
Sbjct: 186 VAVGGQHSAAVSEDGVLYTWGRGSYGRLGHGTS--DDVAFPQPVLALKSKDILIATVACG 243
Query: 90 AGGWHSAARTQDGFLYA-----WGWNNGGQV-GVEGKLDL--VVHDPHPMSWSEDFDSQN 141
G H+ A ++DG +YA +GW G GKL L P++ DFD
Sbjct: 244 IGDAHTLALSRDGVIYAFGDGDYGWGPAPATGGASGKLGLGSTERTRVPVAIPCDFDGTK 303
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
+K V CG + + L + +L+ W + ++G G S
Sbjct: 304 VK--QVWCGRQISACLTEGGALY--TWGNASGGALGNGES 339
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG H L LTQ G V+S+G G +G+LG P + + P ++ + ++ G
Sbjct: 3251 VACGDRHTLVLTQRGGVYSFGCGDQGRLGIPEAPHKL-LRPAKL-DFGRARMTRVICGCN 3308
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
SAA T G LY WG ++G ++ P+ + D + K+VD + G H
Sbjct: 3309 SSAALTDTGQLYVWGTGRSYRLGTGSMTSHML----PIRVT---DLASHKIVDASLGHEH 3361
Query: 154 TLALCDDNSLWGCGWNEYNQL 174
+A+ + ++ G N+ +QL
Sbjct: 3362 GVAVSETGDVFVWGSNDSSQL 3382
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG H A+T G ++ WG G+LG + EP + L V ++
Sbjct: 3198 VLRVACGRRHSAAVTATGQLYMWGCNHHGRLGL--GDQNDRYEPTLVPNLPP--VQMVAC 3253
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+ TQ G +Y++G + G++G+ PH + D ++ V CG
Sbjct: 3254 GDRHTLVLTQRGGVYSFGCGDQGRLGIP-------EAPHKLLRPAKLDFGRARMTRVICG 3306
Query: 151 SRHTLALCDDNSL--WGCG 167
+ AL D L WG G
Sbjct: 3307 CNSSAALTDTGQLYVWGTG 3325
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
+ P K+L P+++D F +T + CG + ALT G ++ WG G +LG
Sbjct: 3280 IPEAPHKLLR-----PAKLD-FGRARMTRVICGCNSSAALTDTGQLYVWGTGRSYRLG-- 3331
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+ ++M P + L+ +V S G H A ++ G ++ WG N+ Q+G
Sbjct: 3332 TGSMTSHMLPIRVTDLASHKIVDASLGHEHGVAVSETGDVFVWGSNDSSQLG 3383
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 16/124 (12%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G VV ++ GG+H+ T+D L G G++G+ D P P
Sbjct: 3145 GPKVVDVAYGGYHTLVVTEDHRLLVCGTGKNGKLGLRDTRDQSSLVPVPGLRD------- 3197
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
V+ VACG RH+ A+ L+ G N + +L +G + P V N P V
Sbjct: 3198 --VLRVACGRRHSAAVTATGQLYMWGCNHHGRLGLGDQNDRYE-------PTLVPNLPPV 3248
Query: 202 KLFA 205
++ A
Sbjct: 3249 QMVA 3252
>gi|356566559|ref|XP_003551498.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 525
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 9/153 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQIS 89
V DI+CG H + +T G + ++G G GQ G G + + + P + +L G V +I+
Sbjct: 350 VMDISCGGRHSVVITDAGALLTFGWGLYGQCG---QGNNVDQLRPTLVPSLLGTRVEKIA 406
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG WH+ T +G +YA+G N GQ+G D P + S F++++ +V +C
Sbjct: 407 AGLWHTLCVTVNGQIYAFGGNQFGQLGT--GTDQPETSPRQLDASR-FENKHSSIV--SC 461
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
G+RH+ L DD L+ GWN+Y QL +G V +
Sbjct: 462 GARHSALLTDDGHLFTWGWNKYGQLGLGDSVDR 494
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIR 78
P+ + L V IA G H L +T G ++++G GQLG +GTD PR++
Sbjct: 391 PTLVPSLLGTRVEKIAAGLWHTLCVTVNGQIYAFGGNQFGQLG---TGTDQPETSPRQLD 447
Query: 79 A--LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
A +S G HSA T DG L+ WGWN GQ+G+ +D + P +S +
Sbjct: 448 ASRFENKHSSIVSCGARHSALLTDDGHLFTWGWNKYGQLGLGDSVDRNI--PGQVSIA-- 503
Query: 137 FDSQNIKVVDVACGSRHTLALCDDN 161
+ +VACG HTL L D
Sbjct: 504 ----GCRPRNVACGWWHTLLLGDKT 524
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
+ P + +G+ + +S GG H+ A + G ++ WG+ GQ+G+ ++ +V PH
Sbjct: 259 TVSPSLVTLGNGVKITSVSLGGRHTLALSDVGQVWGWGYGGEGQLGLGSRVKMV-SSPHL 317
Query: 131 M----SWSEDFDS------------QNIK---VVDVACGSRHTLALCDDNSLWGCGWNEY 171
+ S +D S N+ V+D++CG RH++ + D +L GW Y
Sbjct: 318 IPCIESAGKDKSSAFHQGSGAGAQGSNVTGSYVMDISCGGRHSVVITDAGALLTFGWGLY 377
Query: 172 NQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSV 215
Q G V Q+ R ++ + + K+ A W++ ++V
Sbjct: 378 GQCGQGNNVDQL----RPTLVPSLLGTRVEKIAAGLWHTLCVTV 417
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
CGF + ++++G + +WG+ Y SG + P + + VV+ +AG H
Sbjct: 105 GCGF--AMVISEKGKLITWGSADDEGQSYLISGKHGEI-PGLYQLPTEASVVKAAAGWAH 161
Query: 95 SAARTQDGFLYAWGWNN 111
A+ T++G +YAWGW
Sbjct: 162 CASVTEEGEVYAWGWKE 178
>gi|281209605|gb|EFA83773.1| RhoGAP domain-containing protein [Polysphondylium pallidum PN500]
Length = 1039
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG-----LG 84
VV ++CGF+H L LT++ VFS G GQLG + + P I AL G +
Sbjct: 75 VVISVSCGFNHTLLLTEDRRVFSMGLNGAGQLG---TDIGDSAVPLPIVALPGNIAKVVA 131
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
Q+ G H+ A T +G +YAWG N+ GQ+G+ D V P P+ +
Sbjct: 132 GNQLVFGDQHTLALTNEGAIYAWGSNSRGQLGLGHNNDKVA--PVPLEQLSTVVGYKMPA 189
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
+D+ G +H+ AL +D ++ G N Y QL G GV ++ R+ V
Sbjct: 190 IDIDAGQQHSAALTNDGVVFMWGSNSYGQLGNG-GVEDSNMPVRIQV 235
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS-----GLGVVQI 88
+ G H LALT EG +++WG+ SRGQLG + + P + LS + + I
Sbjct: 135 LVFGDQHTLALTNEGAIYAWGSNSRGQLGL--GHNNDKVAPVPLEQLSTVVGYKMPAIDI 192
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
AG HSAA T DG ++ WG N+ GQ+G G V D + M D ++ ++ +A
Sbjct: 193 DAGQQHSAALTNDGVVFMWGSNSYGQLGNGG-----VEDSN-MPVRIQVDVEDKRIHSIA 246
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G HT+ L ++ G E +QL G
Sbjct: 247 LGLNHTILLTASGEVYTFGSGESHQLGHG 275
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 3 DHLASGPLKMLSQV--FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQ 60
D +A PL+ LS V + MP+ DI G H ALT +G+VF WG+ S GQ
Sbjct: 169 DKVAPVPLEQLSTVVGYKMPA----------IDIDAGQQHSAALTNDGVVFMWGSNSYGQ 218
Query: 61 LGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
LG D+NM R + + I+ G H+ T G +Y +G Q+G
Sbjct: 219 LGN-GGVEDSNMPVRIQVDVEDKRIHSIALGLNHTILLTASGEVYTFGSGESHQLG 273
>gi|156365555|ref|XP_001626710.1| predicted protein [Nematostella vectensis]
gi|156213597|gb|EDO34610.1| predicted protein [Nematostella vectensis]
Length = 262
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D VT IACG H L +T +G +FSWGNG+ GQLG S+ T + G +
Sbjct: 37 DGQVTHIACGSSHTLVITGDGRLFSWGNGNSGQLGIGSTNTTLQPHLVPLGVTPGTRIEG 96
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G HS T++G +++G N Q+G + K D + P+ F N KV+
Sbjct: 97 VACGTRHSFVWTEEGECFSFGNNYSAQLGYDFRKPDFKDNQLKPIYVDTLF---NRKVLQ 153
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
VACGSRH+L L + + G N Q+ +G
Sbjct: 154 VACGSRHSLFLFSNGHVAAVGCNNRGQIGIG 184
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY---PSSGTDANMEPREIRALSGLGVVQ 87
+ +ACG H T+EG FS+GN QLGY D ++P + L V+Q
Sbjct: 94 IEGVACGTRHSFVWTEEGECFSFGNNYSAQLGYDFRKPDFKDNQLKPIYVDTLFNRKVLQ 153
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS +G + A G NN GQ+G+ K D P D + V V
Sbjct: 154 VACGSRHSLFLFSNGHVAAVGCNNRGQIGIGNKTDTFCIQNVP-------DLTGVTV--V 204
Query: 148 ACGSRHTLALCDDNSLWGCGWNE 170
ACG+ H LA +W G+++
Sbjct: 205 ACGNSHCLAADVQGQVWAWGYSK 227
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +D + V +ACG H L L G V + G +RGQ+G + TD + +
Sbjct: 140 PIYVDTLFNRKVLQVACGSRHSLFLFSNGHVAAVGCNNRGQIGIGNK-TDT-FCIQNVPD 197
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWN 110
L+G+ VV + G H A G ++AWG++
Sbjct: 198 LTGVTVV--ACGNSHCLAADVQGQVWAWGYS 226
>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
[Ornithorhynchus anatinus]
Length = 531
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI-RALSGLGVVQI 88
VT++ACG H +AL +G V++WG + GQ+G SG+ AN PR++ L VV I
Sbjct: 130 VTEVACGSHHSMALADDGEVYAWGYNNCGQVG---SGSTANQPTPRKVTNCLHIKRVVSI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ ++ + ++ ++ V+ +
Sbjct: 187 ACGQTSSMAVLDNGEVYGWGYNGNGQLGLG-------NNGNQLTPCRVAALHSVCVLQIV 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTLAL D+ L+ G N Y QL G
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RALSGLGVVQISAGGWHSAAR 98
H L T++GIV++WG+ QLG + T+ + P +I L V +++ G HS A
Sbjct: 86 HVLLSTEDGIVYAWGHNGYSQLG--NGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMAL 143
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
DG +YAWG+NN GQVG + P P + + +VV +ACG ++A+
Sbjct: 144 ADDGEVYAWGYNNCGQVGSGS----TANQPTPRKVTNCLHIK--RVVSIACGQTSSMAVL 197
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVS 184
D+ ++G G+N QL +G +Q++
Sbjct: 198 DNGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG +A+ G V+ WG GQLG ++G + P + AL + V+QI
Sbjct: 183 VVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--QLTPCRVAALHSVCVLQIVC 240
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV-AC 149
G H+ A T +G LYAWG N GQ+G K +L+ P + ++ +VV++ AC
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLL--SPAQIMVEKE------RVVEIAAC 292
Query: 150 GSRHTLA 156
S HT A
Sbjct: 293 HSAHTSA 299
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 35 ACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
AC F + + +T VF +G LG + + + P+++ LSG + +S
Sbjct: 24 ACVFGTSANEAIYVTHSDEVFVFGVNCSNCLG--TGDNQSTIVPKKLELLSGKKIKSLSY 81
Query: 91 G-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G G H T+DG +YAWG N Q+G G + + P+ + + +V +VAC
Sbjct: 82 GSGPHVLLSTEDGIVYAWGHNGYSQLG-NGTTNQGI---APIQICTNLMIK--QVTEVAC 135
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVK 202
GS H++AL DD ++ G+N Q+ G +Q P V NC +K
Sbjct: 136 GSHHSMALADDGEVYAWGYNNCGQVGSGSTANQ-------PTPRKVTNCLHIK 181
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ + V I CG+ H LALT EG++++WG + GQLG +G +N + P +I
Sbjct: 224 PCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNLLSPAQIM 280
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ VV+I+A SAA+TQ G +Y WG G V
Sbjct: 281 -VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 318
>gi|307188168|gb|EFN73000.1| Williams-Beuren syndrome chromosomal region 16 protein-like protein
[Camponotus floridanus]
Length = 444
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR---EIRALSGLGVVQ 87
V +A G H L LT EG+ F+ GN + GQ G P + + R I + G +
Sbjct: 155 VIGMAAGRAHLLILTMEGL-FTLGNNAYGQCGRPIIANENYEKSRVVHHIPNIKGSKITA 213
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++AG HS T+ G +YA+GW GQ G L ++ P D Q+I + V
Sbjct: 214 VAAGQDHSILLTEVGEVYAFGWGADGQTG----LAHYRNEHRPSLVKGDLAGQHI--IKV 267
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
AC + LAL D ++G G +EY QLS+ QV + T L++PE +
Sbjct: 268 ACIADCVLALSDKGKVYGWGNSEYGQLSVKGDSCQVYIATELNLPEEI 315
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS------GTDANMEPREIRALSGLG 84
+ +AC D LAL+ +G V+ WGN GQL T+ N+ P EI ++
Sbjct: 264 IIKVACIADCVLALSDKGKVYGWGNSEYGQLSVKGDSCQVYIATELNL-PEEIGHIT--- 319
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH--PMSWSEDFDSQNI 142
I+ GG G +Y WG+ G +G+ ++ ++ P + + +++I
Sbjct: 320 --DIATGGCFCMILNSAGNIYVWGY---GILGLGPQVQKILKPTMIPPTLFGNNVYNRDI 374
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
KV + CG AL + L+ G N++ L +G Q + R++V VK
Sbjct: 375 KVTKIYCGISQLAALTNSGDLYMWGGNKFGSLGLGHRNDQFFPL-RVAVGAQVKK 428
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 32/157 (20%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG---------- 62
++ ++P + H +TDIA G C+ L G ++ WG G G LG
Sbjct: 305 IATELNLPEEIGH-----ITDIATGGCFCMILNSAGNIYVWGYGILG-LGPQVQKILKPT 358
Query: 63 -YPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
P + N+ R+I+ V +I G AA T G LY WG N G +G+ +
Sbjct: 359 MIPPTLFGNNVYNRDIK------VTKIYCGISQLAALTNSGDLYMWGGNKFGSLGLGHRN 412
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
D P+ + +V VACG HT+ LC
Sbjct: 413 DQFF----PLRV-----AVGAQVKKVACGVDHTVTLC 440
>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
Length = 833
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR-ALSGLGVVQISAGGWHSAAR 98
H LALT +G VFSWG+G G+LG+ +S T P++I+ AL G V ISAG HSAA
Sbjct: 474 HTLALTADGEVFSWGDGDYGKLGHGNSSTQKY--PKQIQGALQGKVVKSISAGYRHSAAV 531
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVH-DPHPMSWSEDFDSQ-NIKVVDVACGSRHTLA 156
T+DG L+ WG + G++G + H D + + + ++ + + V CGS+ +LA
Sbjct: 532 TEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLA 591
Query: 157 LCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
L L WGCG +GCG S S R + E + N IV
Sbjct: 592 LTSTGQLFAWGCG------ACLGCG-SPESTALRPKLVEELANTRIV 631
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG-------TDANMEPREIRALSG 82
VV I+ G+ H A+T++G +F+WG G G+LG+ S T+ +P+ I AL G
Sbjct: 517 VVKSISAGYRHSAAVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVG 576
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
L + ++ G S A T G L+AWG G +G G + P + + N
Sbjct: 577 LYIRKVCCGSQSSLALTSTGQLFAWGC--GACLGC-GSPESTALRPKLVE-----ELANT 628
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
++VDVACG H LAL DN ++ G N Q G S ++
Sbjct: 629 RIVDVACGDSHCLALTHDNEVYAWGNNAMGQCGQGHSQSPIT 670
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + + D+ACG HCLALT + V++WGN + GQ G S + +P+++
Sbjct: 619 PKLVEELANTRIVDVACGDSHCLALTHDNEVYAWGNNAMGQCGQGHSQSPIT-KPKKVVG 677
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ V QISAG HS A T D + AW
Sbjct: 678 LDGVTVHQISAGTSHSLAWTALPTDRQVVAW 708
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + L + + CG LALT G +F+WG G+ G P S + P+ +
Sbjct: 566 YKPKVIEALVGLYIRKVCCGSQSSLALTSTGQLFAWGCGACLGCGSPES---TALRPKLV 622
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V ++ G H A T D +YAWG N GQ G +G H P++ +
Sbjct: 623 EELANTRIVDVACGDSHCLALTHDNEVYAWGNNAMGQCG-QG------HSQSPITKPKKV 675
Query: 138 DSQN-IKVVDVACGSRHTLA 156
+ + V ++ G+ H+LA
Sbjct: 676 VGLDGVTVHQISAGTSHSLA 695
>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
purpuratus]
Length = 1139
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRAL--SGLGVVQISA 90
+ACG DH A+ G V++WG G+LG D P + L G+ V ++
Sbjct: 777 LACGQDHA-AIVANGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVRAVAC 835
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+ A TQ+G LY+WG ++ GQ+GV D VH P++ E Q + + VACG
Sbjct: 836 GKEHTMAVTQEGKLYSWGSSSYGQLGVG---DRNVHS-RPVAV-EALSGQ--RCLSVACG 888
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNS 210
HTL L D LW GW + QL G G + ++ +L + C IV + A + +S
Sbjct: 889 QLHTLVLTQDQRLWSFGWGVHGQL--GHGDVEDQILPKLV--NQLSKCAIVGISAGYAHS 944
Query: 211 ARLS 214
L+
Sbjct: 945 GALT 948
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
Query: 20 PSRMD--HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P R++ H + V +ACG +H +A+TQEG ++SWG+ S GQLG + + P +
Sbjct: 817 PLRVETLHMHGIHVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGV--GDRNVHSRPVAV 874
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
ALSG + ++ G H+ TQD L+++GW GQ+G D ++ P ++
Sbjct: 875 EALSGQRCLSVACGQLHTLVLTQDQRLWSFGWGVHGQLGHGDVEDQIL--PKLVN----- 927
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG-CGVSQVSVMTRLSVPEHV 195
+V ++ G H+ AL +D +W G + + QL G G S V V + HV
Sbjct: 928 QLSKCAIVGISAGYAHSGALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHV 986
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 31/190 (16%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + I+ G+ H ALT +G V+ +G+ S GQLG S G + P ++
Sbjct: 922 LPKLVNQLSKCAIVGISAGYAHSGALTNDGQVWMFGSSSFGQLGTGSIG--KSTVPVRLK 979
Query: 79 ALSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVH----------D 127
ALS V ++ G + + A T + +Y WG + + + L L D
Sbjct: 980 ALSSHHVSILTCGYYSNIAITSNPQKVYTWGKS---PLELRQALQLARKRHQSSRYSNPD 1036
Query: 128 PHPMSWSE----DFDSQNI-----------KVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
PH + + ++Q++ + + H L L L+ G NE
Sbjct: 1037 PHHQTVTRLPSLPLENQHLLPSLVPTNIQAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAG 1096
Query: 173 QLSMGCGVSQ 182
QL MG VSQ
Sbjct: 1097 QLGMGNRVSQ 1106
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+ A G AA +G +Y WG + G++G + L P P+ E I V V
Sbjct: 776 VLACGQDHAAIVANGDVYTWGRAHEGRLGQGDIMSLDGRAP-PLRV-ETLHMHGIHVRAV 833
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
ACG HT+A+ + L+ G + Y QL +G
Sbjct: 834 ACGKEHTMAVTQEGKLYSWGSSSYGQLGVG 863
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLG 84
F+ VV + G HCLAL+ EG V+SWG G G+LG+ G ++ E PR I +L G
Sbjct: 667 FIKKVV--VNSGGKHCLALSAEGEVYSWGEGDDGKLGH---GNKSSCERPRVIESLRGKE 721
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV ++ GG HSA T G LY WG G++G G D D E ++
Sbjct: 722 VVDVACGGAHSACITASGELYTWGKGRYGRLG-HGDSD----DQLRPKKVEALSGWRVRC 776
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V G TL + DD+ +W G +Y +L G
Sbjct: 777 VACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRG 809
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 13/152 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P R+D + V + CG +ALT G V++WG G +LG+ GTD ++ P+ +
Sbjct: 816 VPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGH---GTDDHVRRPKRV 872
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G V+ I+ G H A T G +Y WG N+ GQ+G +G ++ +H P ++
Sbjct: 873 AALQGKKVICIAVGSLHCVACTDTGEVYTWGDNDEGQLG-DGTVN-AIHKPRLVA----- 925
Query: 138 DSQNIKVVDVACGSRHTLA--LCDDNSLWGCG 167
Q K+ V+CGS HT+A C+ ++ CG
Sbjct: 926 ALQGKKINRVSCGSAHTVAWSTCNPSTAGACG 957
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 27/168 (16%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ V D+ACG H +T G +++WG G G+LG+ S D + P+++ A
Sbjct: 711 PRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGDS--DDQLRPKKVEA 768
Query: 80 LSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG--------KLDLVVHDPH 129
LSG V V +G + T D +++WG + G++G G ++DL+
Sbjct: 769 LSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLL----- 823
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + V+ V CGS+ ++AL S++ G +Y++L G
Sbjct: 824 ----------QGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHG 861
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G + WG+ RGQLG G + P ALS L +Q+ G A T DG +YA
Sbjct: 581 GTILGWGHNHRGQLGG-VEGAKVKL-PMPCEALSALRPIQVVGGEQTLFAVTADGKVYAT 638
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G + + E IK V V G +H LAL + ++ G
Sbjct: 639 GYGAGGRLGIGGTDSVSCP-----TLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWG 693
Query: 168 WNEYNQLSMG 177
+ +L G
Sbjct: 694 EGDDGKLGHG 703
>gi|393202066|ref|YP_006463908.1| alpha-tubulin suppressor [Solibacillus silvestris StLB046]
gi|327441397|dbj|BAK17762.1| alpha-tubulin suppressor [Solibacillus silvestris StLB046]
Length = 797
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L + IA G +H +AL + G V++WG ++GQLGY ++ + +N+ P ++ ++ ++ I
Sbjct: 89 LNIKAIAAGSNHTVALDRNGEVWTWGRNNQGQLGYTTANSFSNL-PAKVTGITS-KIIAI 146
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
SAG +H+ A ++G ++AWG N+ GQ+G + L +S ++ VA
Sbjct: 147 SAGEYHTLAVDENGQVWAWGRNDYGQIGTDCNPALAHVQVCGVS----------GIIAVA 196
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G H++AL D ++W G N QL G
Sbjct: 197 AGDNHSVALKSDGTVWAWGRNTVGQLGNG 225
Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 19/141 (13%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +A G +H +AL +G V++WG + GQLG + TD N P + LS +V ISA
Sbjct: 192 IIAVAAGDNHSVALKSDGTVWAWGRNTVGQLGNGET-TDINTNPTAVPGLSN--IVDISA 248
Query: 91 GGWHSAARTQDGF-LYAWGWNNGGQV---GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
G H+ A QD +YAWG+N+ GQ+ G+E KL + + N KV
Sbjct: 249 GANHTLALKQDSTSIYAWGFNSSGQLGDGGLESKLRPI-----------QVEGMN-KVKT 296
Query: 147 VACGSRHTLALCDDNSLWGCG 167
+A G+ H++A+ +D ++W G
Sbjct: 297 IAAGNNHSIAIKEDGTVWTWG 317
Score = 70.5 bits (171), Expect = 5e-10, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+++ ++ I+ G H LA+ + G V++WG GQ+G TD N +
Sbjct: 131 NLPAKVTGITSKIIA-ISAGEYHTLAVDENGQVWAWGRNDYGQIG-----TDCNPALAHV 184
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ G++ ++AG HS A DG ++AWG N GQ+G G+ + +P + +
Sbjct: 185 QVCGVSGIIAVAAGDNHSVALKSDGTVWAWGRNTVGQLG-NGETTDINTNPTAVPGLSN- 242
Query: 138 DSQNIKVVDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMG 177
+VD++ G+ HTLAL D+ S++ G+N QL G
Sbjct: 243 ------IVDISAGANHTLALKQDSTSIYAWGFNSSGQLGDG 277
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G +H + L ++G V+ WG+ S GQLG S T + + ++ L + I+AG H+
Sbjct: 43 GKNHFIVLKEDGSVWGWGDHSYGQLGANGSNTSSPIPIQKADGNRLLNIKAIAAGSNHTV 102
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
A ++G ++ WG NN GQ+G + K++ ++ G HTLA
Sbjct: 103 ALDRNGEVWTWGRNNQGQLGYTTANSF-------SNLPAKVTGITSKIIAISAGEYHTLA 155
Query: 157 LCDDNSLWGCGWNEYNQLSMGC 178
+ ++ +W G N+Y Q+ C
Sbjct: 156 VDENGQVWAWGRNDYGQIGTDC 177
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 31 VTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+ DI+ G +H LAL Q+ +++WG S GQLG G ++ + P ++ ++ V I+
Sbjct: 243 IVDISAGANHTLALKQDSTSIYAWGFNSSGQLG--DGGLESKLRPIQVEGMNK--VKTIA 298
Query: 90 AGGWHSAARTQDGFLYAWGWNNGG 113
AG HS A +DG ++ WG + G
Sbjct: 299 AGNNHSIAIKEDGTVWTWGRHTSG 322
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+ G H +DG ++ WG ++ GQ+G G P P+ ++ NIK +
Sbjct: 40 VDVGKNHFIVLKEDGSVWGWGDHSYGQLGANGS---NTSSPIPIQKADGNRLLNIKA--I 94
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQL 174
A GS HT+AL + +W G N QL
Sbjct: 95 AAGSNHTVALDRNGEVWTWGRNNQGQL 121
>gi|431895049|gb|ELK04842.1| Alsin [Pteropus alecto]
Length = 1500
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 22/184 (11%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGN---GSRGQLGYPSSGTDANMEPR 75
+P R+ + V A G H + LT++G+V+S+G S PSS N
Sbjct: 31 IPERLSGWGGKTVLQAALGAKHGVLLTEDGVVYSFGTLPWRSEPAEICPSSPILEN---- 86
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
AL G VV ++AG +HS A T+ G +Y WG N+ GQ V + V +P+P+S S+
Sbjct: 87 ---ALVGQYVVTVAAGSFHSGAVTESGIVYMWGENSAGQCAVANQQ--YVPEPNPVSISD 141
Query: 136 DFDSQ--NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
S ++++ +ACG HTLAL +W G GC + ++ ++ P+
Sbjct: 142 SETSPLLAVRILQLACGEEHTLALSISREIWAWG--------TGCQLGLITTTFPVTKPQ 193
Query: 194 HVKN 197
+++
Sbjct: 194 KIEH 197
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+V+T G L + V++WG G GQLG+ ++P ++ L G V+ +
Sbjct: 505 VVLTPTYSGEADALLPSLRTEVWTWGKGKDGQLGH--GDVLPRLQPLCVKCLDGKEVIHL 562
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE--DFDSQNIKVVD 146
AGG HS A T +Y+WG N GQ+G H P + D++N V
Sbjct: 563 EAGGVHSLALTAKSQVYSWGSNTFGQLG---------HSDFPTTIPRLAKVDNEN-GVWS 612
Query: 147 VACGSRHTLALCD 159
VA G ++L L D
Sbjct: 613 VAAGQDYSLFLVD 625
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
S L + + +ACG +H LAL+ +++WG G QLG ++ T +P++I L
Sbjct: 142 SETSPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITT-TFPVTKPQKIEHL 198
Query: 81 SGLGVVQISAGGWHSAARTQ 100
+G V+Q++ G +HS A Q
Sbjct: 199 AGRVVLQVACGAFHSLALVQ 218
>gi|356501083|ref|XP_003519358.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 477
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 22/177 (12%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
LA G + Q F +P + IACG H +T G + ++G G GQ G
Sbjct: 283 LARGNMGSEGQTFRIPGSY-------IKRIACGGRHSAVITDAGALLTFGWGLYGQCG-- 333
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG----K 120
TD + P + +L G+ + I+AG WH+ + DG +YA+G N GQ+G
Sbjct: 334 QGITDDELSPTCVSSLLGIHIEGIAAGLWHTVCTSADGDVYAFGGNQFGQLGTGADQAET 393
Query: 121 LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
L +V P +N+ +++CG+RHT + + ++ GWN+Y QL +G
Sbjct: 394 LPRLVDSP---------SLKNLHAKNISCGARHTALVTEGGKVFCWGWNKYGQLGLG 441
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREI- 77
P+ + L + + IA G H + + +G V+++G GQLG +G D A PR +
Sbjct: 343 PTCVSSLLGIHIEGIAAGLWHTVCTSADGDVYAFGGNQFGQLG---TGADQAETLPRLVD 399
Query: 78 -RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+L L IS G H+A T+ G ++ WGWN GQ+G+ +D + +
Sbjct: 400 SPSLKNLHAKNISCGARHTALVTEGGKVFCWGWNKYGQLGLGDVIDRNI--------PSE 451
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNS 162
+ +VACG HTL L + ++
Sbjct: 452 VTIEGCVPKNVACGWWHTLLLAESHT 477
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS----------------------- 65
+ + +A G H LAL+ G+V++WG G GQLG S
Sbjct: 220 IRIASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSRIRMVSTPHLVPCIDSSYYVKDR 279
Query: 66 SGTDA--NM--EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
S T A NM E + R + G + +I+ GG HSA T G L +GW GQ G +G
Sbjct: 280 SATLARGNMGSEGQTFR-IPGSYIKRIACGGRHSAVITDAGALLTFGWGLYGQCG-QGIT 337
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
D + P S I + +A G HT+ D ++ G N++ QL G G
Sbjct: 338 D---DELSPTCVSSLL---GIHIEGIAAGLWHTVCTSADGDVYAFGGNQFGQL--GTGAD 389
Query: 182 QVSVMTRLSVPEHVKN 197
Q + RL +KN
Sbjct: 390 QAETLPRLVDSPSLKN 405
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 23/118 (19%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM---------- 131
G+ + ++AGG H+ A + G ++AWG+ GQ+G+ ++ + V PH +
Sbjct: 219 GIRIASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSRIRM-VSTPHLVPCIDSSYYVK 277
Query: 132 ------------SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S + F + +ACG RH+ + D +L GW Y Q G
Sbjct: 278 DRSATLARGNMGSEGQTFRIPGSYIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 73/200 (36%), Gaps = 36/200 (18%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWG----NGSRG 59
++ SG + F +P+ + A G+ HC+A+T+ G V++WG S
Sbjct: 82 YVTSGKHGETPEPFPLPTETS------IVKAAAGWAHCVAVTEHGEVYTWGWKECIPSGK 135
Query: 60 QLGYPSSGTD--------------ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
G S+G + PR + S G ++G + R
Sbjct: 136 VFGESSTGVSLEKDVPGRHTPLFTEQVSPRSQGSRSTGGTASSNSGEESTKRRRVSSAKQ 195
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
++ + LV +P I++ VA G RHTLAL D +W
Sbjct: 196 TAESSSSSDDSLTAFPCLVTLNP------------GIRIASVAAGGRHTLALSDTGLVWA 243
Query: 166 CGWNEYNQLSMGCGVSQVSV 185
G+ QL +G + VS
Sbjct: 244 WGYGGEGQLGLGSRIRMVST 263
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 9/130 (6%)
Query: 36 CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHS 95
CGF +A+++ G + +WG+ Y +SG P + +V+ +AG H
Sbjct: 57 CGF--AIAISESGKLITWGSTDDLGQSYVTSGKHGET-PEPFPLPTETSIVKAAAGWAHC 113
Query: 96 AARTQDGFLYAWGWNN---GGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
A T+ G +Y WGW G+V E + + P + F Q V + GSR
Sbjct: 114 VAVTEHGEVYTWGWKECIPSGKVFGESSTGVSLEKDVPGRHTPLFTEQ---VSPRSQGSR 170
Query: 153 HTLALCDDNS 162
T NS
Sbjct: 171 STGGTASSNS 180
>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
Length = 557
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 15/213 (7%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRA-LSG 82
+ L+ VT++ACG H +ALT G V++WG + GQ+G SG+ AN PR + + L
Sbjct: 139 NLLNKKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVG---SGSTANQPTPRRVSSCLQN 195
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
V I G S A +G +Y WG+N GQ+G+ ++ + ++ Q +
Sbjct: 196 RVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLG-------NNGNQLTPCRLVALQGL 248
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS---VMTRLSVPEHVKNCP 199
V + G H+LAL D+ L+ G N Y QL G +Q+S +MT + C
Sbjct: 249 CVQQIVSGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQIMTEKERIVEIAACH 308
Query: 200 IVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHW 232
A S ++ + + SIV + H+
Sbjct: 309 STHTSAAKTQSGQVYMWGQCRGQSIVLPYLTHF 341
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L AC F + + +T + V++ G LG + + +++ P+++ LSG
Sbjct: 32 ELSTIRKACVFGTSANEAIYITADDEVYALGLNCSNCLG--TGDSQSSIVPKKVDILSGR 89
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
VV +S G G H T+DG L+AWG N Q+G G + V P+ S + N
Sbjct: 90 KVVSLSYGSGPHILLATEDGELFAWGHNGYSQLG-NGTTNQGV---APVLVSANL--LNK 143
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
KV +VACGS H++AL D ++ G+N Q+ G +Q P V +C
Sbjct: 144 KVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQ-------PTPRRVSSC 192
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ L V I G+ H LALT EG++++WG + GQLG +G +N + P +I
Sbjct: 239 PCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPVQIM 295
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+V+I+A SAA+TQ G +Y WG G +
Sbjct: 296 T-EKERIVEIAACHSTHTSAAKTQSGQVYMWGQCRGQSI 333
>gi|413924969|gb|AFW64901.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 263
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 9/173 (5%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGG 92
+ACG H L LTQ G VF+ G GQLG +S T +EP EI VV++SAG
Sbjct: 68 SLACGGAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHM-LEPVEISGFHER-VVEVSAGN 125
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
HS A T DG L+ WG N+GGQ+G+ VV P + D ++V VA GS
Sbjct: 126 HHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTD-----LRVKTVALGSE 180
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG--CGVSQVSVMTRLSVPEHVKNCPIVKL 203
H++A+ ++ + G +L G + S+ + P +KN +K+
Sbjct: 181 HSIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKI 233
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 8 GPLKMLSQVFHM--PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
G L + + V HM P + F + VV +++ G H A+T +G +F WG S GQLG
Sbjct: 94 GQLGIGTSVTHMLEPVEISGFHERVV-EVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGK 152
Query: 66 SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
P ++ L+ L V ++ G HS A T++G + +WG G++G + ++
Sbjct: 153 GAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILG 212
Query: 126 HDPHPMSWS----EDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
++ ++FD IK+ +A G H+ A D +W
Sbjct: 213 FSLTSTEYTPRLIKNFD--GIKIKKIAAGMLHS-ACIDGKGIW 252
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 34/193 (17%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPRE---IRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
WGNG G+LG S ++ P A + ++ GG H+ TQ+G ++A G
Sbjct: 33 WGNGDYGRLGLGS--LESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQNGRVFATGL 90
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ GQ+G+ V H P+ + + +VV+V+ G+ H+ A+ D L+ G N
Sbjct: 91 NDFGQLGIGTS---VTHMLEPV----EISGFHERVVEVSAGNHHSCAVTADGKLFVWGRN 143
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK-----NCPIVKLFAEH------------WNSAR 212
QL +G G +V +S P V V L +EH W +A
Sbjct: 144 SGGQLGLGKGAGKV-----VSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAAG 198
Query: 213 LSVPEHAKDSSIV 225
H + SSI+
Sbjct: 199 SGRLGHGRQSSIL 211
>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
griseus]
gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
Length = 531
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRA-LSGLGVVQI 88
V ++ACG H +AL +G VF+WG + GQ+G SG+ AN PR++ + L VV I
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVG---SGSTANQPTPRKVTSCLHTKRVVSI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G+ ++ + ++ Q++ V +
Sbjct: 187 ACGQTSSMAVLDSGEVYGWGYNGNGQLGLG-------NNGNQLTPVRVAALQSVCVNQIV 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTLAL D+ L+ G N Y QL G
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +++ + ++ G H L T++G+V++WG+ QLG + T+ + P ++
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG--NGTTNQGIAPVQV 121
Query: 78 -RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L VV+++ G HS A DG ++AWG+NN GQVG + P P +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGS----TANQPTPRKVTSC 177
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
++ +VV +ACG ++A+ D ++G G+N QL +G +Q++
Sbjct: 178 LHTK--RVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG +A+ G V+ WG GQLG ++G + P + AL + V QI
Sbjct: 183 VVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--QLTPVRVAALQSVCVNQIVC 240
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV-AC 149
G H+ A T +G LYAWG N GQ+G K +L+ P P+ ++ +VV++ AC
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLL--SPTPIMVEKE------RVVEIAAC 292
Query: 150 GSRHTLA 156
S HT A
Sbjct: 293 HSTHTSA 299
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V I CG+ H LALT EG++++WG + GQLG +G+ N+
Sbjct: 224 PVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTPIM 280
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ VV+I+A SAA+TQ G +Y WG G V
Sbjct: 281 VEKERVVEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 318
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 35 ACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
AC F + + +T VF +G LG + + + P+++ AL G + +S
Sbjct: 24 ACVFGASANEAIYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSY 81
Query: 91 G-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G G H T+DG +YAWG N Q+G G + + P+ + + +VV+VAC
Sbjct: 82 GSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTTNQGI---APVQVCTNLLIK--QVVEVAC 135
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
GS H++AL D ++ G+N Q+ G +Q P V +C
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ-------PTPRKVTSC 177
>gi|413924972|gb|AFW64904.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 263
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 9/173 (5%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGG 92
+ACG H L LTQ G VF+ G GQLG +S T +EP EI VV++SAG
Sbjct: 68 SLACGGAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHM-LEPVEISGFHER-VVEVSAGN 125
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
HS A T DG L+ WG N+GGQ+G+ VV P + D ++V VA GS
Sbjct: 126 HHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTD-----LRVKTVALGSE 180
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG--CGVSQVSVMTRLSVPEHVKNCPIVKL 203
H++A+ ++ + G +L G + S+ + P +KN +K+
Sbjct: 181 HSIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKI 233
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 8 GPLKMLSQVFHM--PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
G L + + V HM P + F + VV +++ G H A+T +G +F WG S GQLG
Sbjct: 94 GQLGIGTSVTHMLEPVEISGFHERVV-EVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGK 152
Query: 66 SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
P ++ L+ L V ++ G HS A T++G + +WG G++G + ++
Sbjct: 153 GAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILG 212
Query: 126 HDPHPMSWS----EDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
++ ++FD IK+ +A G H+ A D+ +W
Sbjct: 213 FSLTSTEYTPRLIKNFD--GIKIKKIAAGMLHS-ACIDEKGIW 252
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 34/193 (17%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPRE---IRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
WGNG G+LG S ++ P A + ++ GG H+ TQ+G ++A G
Sbjct: 33 WGNGDYGRLGLGS--LESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQNGRVFATGL 90
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ GQ+G+ V H P+ + + +VV+V+ G+ H+ A+ D L+ G N
Sbjct: 91 NDFGQLGIGTS---VTHMLEPV----EISGFHERVVEVSAGNHHSCAVTADGKLFVWGRN 143
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK-----NCPIVKLFAEH------------WNSAR 212
QL +G G +V +S P V V L +EH W +A
Sbjct: 144 SGGQLGLGKGAGKV-----VSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAAG 198
Query: 213 LSVPEHAKDSSIV 225
H + SSI+
Sbjct: 199 SGRLGHGRQSSIL 211
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Nomascus leucogenys]
Length = 4855
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 18/172 (10%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S
Sbjct: 4066 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSD------ 4119
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
R+ R G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4120 -RQRRPXQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4176
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4177 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4223
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4170 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4227
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4228 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4275
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4276 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4320
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4276 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4333
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4334 LQGKNVRQISAGRCHSAA 4351
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 17/147 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI--SAG 91
+ CG + + G V + G GS G+LG +S D I AL G V Q+ S G
Sbjct: 4031 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNS--DDLHVLTVISALQGFVVTQLVTSCG 4088
Query: 92 G-WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
HS A T+ G +++WG + G++G H S + Q +VV ++CG
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLG------------HGNSDRQRRPXQGEEVVQMSCG 4136
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+H+ + D L+ G +Y +L +G
Sbjct: 4137 FKHSAVVTSDGKLFTFGNGDYGRLGLG 4163
>gi|307214730|gb|EFN89650.1| RCC1 and BTB domain-containing protein 1 [Harpegnathos saltator]
Length = 225
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 10/167 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P +++ D + A G H LALT +G VFSWG+ +LG S T+ + P +
Sbjct: 43 PKKIEALCDKGIKTFAYGSGPHVLALTDKGEVFSWGHNGYCELGNGS--TNQGLIPTMVN 100
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G +V I+ G HS A T DG +YAWG NN GQVG + + P + +
Sbjct: 101 INLNGKHIVDIACGNHHSLALTDDGEVYAWGQNNCGQVGS----GISTNQGAPRLVNSNL 156
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ KV+ + CG ++A+ + ++G G+N QL +G V+QV+
Sbjct: 157 AGK--KVICITCGQASSMAVTETGEVYGWGYNGVGQLGIGNYVNQVN 201
>gi|168037867|ref|XP_001771424.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677342|gb|EDQ63814.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 465
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IACG H +T G + ++G G GQ+G S T+ + P + + GL +V I+A
Sbjct: 271 IKAIACGGRHSAVVTDAGALLTFGWGLHGQVGQGS--TEDELSPCCVSTIGGLRIVGIAA 328
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G WH+ T G +YA+G N GQ+GV G + ED V+VACG
Sbjct: 329 GLWHTLCITDVGDVYAFGGNQFGQLGVGGNAAELSPRMIDAPLLEDE-----SCVEVACG 383
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+RH+ L ++ GWN+Y QL +G
Sbjct: 384 ARHSAVLTGSGKIFAWGWNKYGQLGLG 410
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 9 PLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
P VF P ++ + + +A G H LAL+ G V++WG G GQLG S
Sbjct: 182 PTAADENVFSPPFLVNLDAGIRIASVAAGGRHTLALSDVGHVWAWGYGGDGQLGL-GSRM 240
Query: 69 DANMEPREIRALS--------------GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQ 114
P++I L+ G + I+ GG HSA T G L +GW GQ
Sbjct: 241 RIVSSPQQIPCLNLTEKAVARSGVPIPGKCIKAIACGGRHSAVVTDAGALLTFGWGLHGQ 300
Query: 115 VGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
VG D + P +S +++V +A G HTL + D ++ G N++ QL
Sbjct: 301 VGQGSTEDEL--SPCCVS-----TIGGLRIVGIAAGLWHTLCITDVGDVYAFGGNQFGQL 353
Query: 175 SMGCGVSQVS 184
+G +++S
Sbjct: 354 GVGGNAAELS 363
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA--LSGLGVV 86
L + IA G H L +T G V+++G GQLG G A + PR I A L V
Sbjct: 321 LRIVGIAAGLWHTLCITDVGDVYAFGGNQFGQLGV--GGNAAELSPRMIDAPLLEDESCV 378
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVE--GKLDLVVHDPHPMSWSEDFDSQNIKV 144
+++ G HSA T G ++AWGWN GQ+G+ DL V + + +
Sbjct: 379 EVACGARHSAVLTGSGKIFAWGWNKYGQLGLGDCNNRDLPV---------QVTMNDGGRA 429
Query: 145 VDVACGSRHTLA 156
+ACG HTLA
Sbjct: 430 ASIACGWWHTLA 441
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 62 GYPSSGTDANME----PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
G P S T A+ P + +G+ + ++AGG H+ A + G ++AWG+ GQ+G+
Sbjct: 177 GSPESPTAADENVFSPPFLVNLDAGIRIASVAAGGRHTLALSDVGHVWAWGYGGDGQLGL 236
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIK---------VVDVACGSRHTLALCDDNSLWGCGW 168
++ +V P + + + + +ACG RH+ + D +L GW
Sbjct: 237 GSRMR-IVSSPQQIPCLNLTEKAVARSGVPIPGKCIKAIACGGRHSAVVTDAGALLTFGW 295
Query: 169 NEYNQLSMGCGVSQVS 184
+ Q+ G ++S
Sbjct: 296 GLHGQVGQGSTEDELS 311
>gi|365760753|gb|EHN02449.1| Srm1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 482
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 92/207 (44%), Gaps = 29/207 (14%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ P ++ F + +A G DH L L +EG+VF+WGNG + QLG ME
Sbjct: 207 KIQTTPWKLPTFSKFNIVQLAPGKDHVLFLDEEGMVFAWGNGQQNQLGRKV------MER 260
Query: 75 REIRALS----GLGVVQ-ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD--LVVHD 127
++ L GL V+ I++G H A T+D L +WG N GQ GV ++ +V
Sbjct: 261 FRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSENVEDGALVTK 320
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
P + ED + V +A G H+L L D L+ CG + G S + T
Sbjct: 321 PKKLPLPED-----VIVRSIAAGEHHSLILSQDGDLYSCG--RLDMFEAGIPKSDLPEYT 373
Query: 188 R---------LSVPEHVKNCPIVKLFA 205
+ +P +KN P K A
Sbjct: 374 YNDVHGKARAIPLPTKLKNVPKFKAVA 400
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 30/205 (14%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTD-IACGFDHCLALTQEGIVFSWGNG--SRG 59
+ L S P K+ F ++ + L TD ++C AL G V++WG + G
Sbjct: 144 NELESTPAKIPRDCFPPLTKGHKIVQLGATDNMSC------ALFSNGEVYAWGTFRCNEG 197
Query: 60 QLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--V 117
LG+ P ++ S +VQ++ G H ++G ++AWG Q+G V
Sbjct: 198 ILGFYQEKIKIQTTPWKLPTFSKFNIVQLAPGKDHVLFLDEEGMVFAWGNGQQNQLGRKV 257
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ L DP P F +++K +A G H AL DN L G N++ Q
Sbjct: 258 MERFRLKTLDPRP------FGLRHVKY--IASGENHCFALTKDNKLVSWGLNQFGQ---- 305
Query: 178 CGVSQ-------VSVMTRLSVPEHV 195
CGVS+ V+ +L +PE V
Sbjct: 306 CGVSENVEDGALVTKPKKLPLPEDV 330
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM--EPREIRALSGLGVVQI 88
V IA G +HC ALT++ + SWG GQ G + D + +P+++ + V I
Sbjct: 276 VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSENVEDGALVTKPKKLPLPEDVIVRSI 335
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL---VVHDPHPMSWSEDFDSQ--NI- 142
+AG HS +QDG LY+ G + + G+ K DL +D H + + ++ N+
Sbjct: 336 AAGEHHSLILSQDGDLYSCGRLDMFEAGIP-KSDLPEYTYNDVHGKARAIPLPTKLKNVP 394
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
K VA GS H++A+ + + G+ E + +G V TR+
Sbjct: 395 KFKAVAAGSHHSIAVAQNGIAYSWGFGETYAVGLGPSEDDTEVPTRIK 442
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG------TDANME 73
P ++ D++V IA G H L L+Q+G ++S G + G P S D + +
Sbjct: 321 PKKLPLPEDVIVRSIAAGEHHSLILSQDGDLYSCGRLDMFEAGIPKSDLPEYTYNDVHGK 380
Query: 74 PREIRALSGLGVV----QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
R I + L V ++AG HS A Q+G Y+WG+ VG+ D D
Sbjct: 381 ARAIPLPTKLKNVPKFKAVAAGSHHSIAVAQNGIAYSWGFGETYAVGLGPSED----DTE 436
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLA 156
+ ++ +Q+ +V + CG + +++
Sbjct: 437 VPTRIKNTATQDHNIVLIGCGGQFSVS 463
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 82/206 (39%), Gaps = 40/206 (19%)
Query: 1 MCDHLASGPLKMLSQVFHMPSRMDHFL---DLVVTDIACGFDHCLALTQEGIVFSWGNGS 57
MC+ L GPL +V R++ FL ++ + A G H LAL ++ V+SWG
Sbjct: 56 MCE-LGLGPLAKNKEVKR--PRLNPFLPRDEVKIISFAVGGMHTLALDEDSNVWSWGCND 112
Query: 58 RGQLGYPSSGTDANMEPREIRALS---------------------------GLGVVQISA 90
G LG +S ++ + LS G +VQ+ A
Sbjct: 113 VGALGRDTSNAKEQLKDMDASDLSDDEDGDLNELESTPAKIPRDCFPPLTKGHKIVQLGA 172
Query: 91 GGWHSAARTQDGFLYAWGWN--NGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
S A +G +YAWG N G +G + + P + F+ +V +A
Sbjct: 173 TDNMSCALFSNGEVYAWGTFRCNEGILGFYQEKIKIQTTPWKLPTFSKFN-----IVQLA 227
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
G H L L ++ ++ G + NQL
Sbjct: 228 PGKDHVLFLDEEGMVFAWGNGQQNQL 253
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 38 FDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR--EIRALSGLGVVQISAGGWH 94
+ H Q +F WG GS +LG P + PR + ++ + GG H
Sbjct: 36 YRHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEVKIISFAVGGMH 95
Query: 95 SAARTQDGFLYAWGWNNGGQVGVE---GKLDLVVHDPHPMSWSEDFD 138
+ A +D +++WG N+ G +G + K L D +S ED D
Sbjct: 96 TLALDEDSNVWSWGCNDVGALGRDTSNAKEQLKDMDASDLSDDEDGD 142
>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
gi|194695574|gb|ACF81871.1| unknown [Zea mays]
gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 418
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG H L LTQ G VF+ G GQLG +S T +EP EI VV++SAG
Sbjct: 69 LACGGAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHM-LEPVEISGFHER-VVEVSAGNH 126
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A T DG L+ WG N+GGQ+G+ VV P + D ++V VA GS H
Sbjct: 127 HSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTD-----LRVKTVALGSEH 181
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG--CGVSQVSVMTRLSVPEHVKNCPIVKL 203
++A+ ++ + G +L G + S+ + P +KN +K+
Sbjct: 182 SIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKI 233
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 24/177 (13%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS----- 65
K +V P+++D DL V +A G +H +A+T+EG V SWG G+LG+
Sbjct: 152 KGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSIL 211
Query: 66 --SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG---GQVGVEGK 120
S T PR I+ G+ + +I+AG HSA + G L+ +G G+ E +
Sbjct: 212 GFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKTEKGFGRPNEEFR 271
Query: 121 LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++V P +SE+ VACG HT + D L+ G NE L +G
Sbjct: 272 PNIVEEIP----FSEE----------VACGGYHTCVVTDSGDLYSWGSNENGCLGLG 314
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 8 GPLKMLSQVFHM--PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
G L + + V HM P + F + VV +++ G H A+T +G +F WG S GQLG
Sbjct: 94 GQLGIGTSVTHMLEPVEISGFHERVV-EVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGK 152
Query: 66 SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
P ++ L+ L V ++ G HS A T++G + +WG G++G + ++
Sbjct: 153 GAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILG 212
Query: 126 HDPHPMSWS----EDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
++ ++FD IK+ +A G H+ + + +L+
Sbjct: 213 FSLTSTEYTPRLIKNFD--GIKIKKIAAGMLHSACIDEKGTLF 253
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 23/140 (16%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAG 91
++ACG H +T G ++SWG+ G LG GTD P +++ L L V ++S G
Sbjct: 283 EVACGGYHTCVVTDSGDLYSWGSNENGCLGL--GGTDMVRSPEILKSSLFKLPVSKVSCG 340
Query: 92 GWHSAARTQDGFLYAWGW------------NNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
H+A + D +Y WGW ++GGQ+G +D +P + +
Sbjct: 341 WKHTAVVSGDD-IYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYF--EPMMVPFG----- 392
Query: 140 QNIKVVDVACGSRHTLALCD 159
N + V V+CG HT A+ +
Sbjct: 393 TNARAVHVSCGFNHTGAIYE 412
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 26/189 (13%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPRE---IRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
WGNG G+LG S ++ P A + ++ GG H+ TQ+G ++A G
Sbjct: 33 WGNGDYGRLGLGS--LESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQNGRVFATGL 90
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ GQ+G+ V H P+ + + +VV+V+ G+ H+ A+ D L+ G N
Sbjct: 91 NDFGQLGIGTS---VTHMLEPV----EISGFHERVVEVSAGNHHSCAVTADGKLFVWGRN 143
Query: 170 EYNQLSMGCGVSQ-VSVMTRLSVPEHVKNCPIVKLFAEH------------WNSARLSVP 216
QL +G G + VS T++ ++ V L +EH W +A
Sbjct: 144 SGGQLGLGKGAGKVVSTPTKVDCLTDLR-VKTVALGSEHSIAVTEEGEVLSWGAAGSGRL 202
Query: 217 EHAKDSSIV 225
H + SSI+
Sbjct: 203 GHGRQSSIL 211
>gi|26381161|dbj|BAB29750.2| unnamed protein product [Mus musculus]
Length = 115
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP+++ + + ++CG H LAL+++G VFSWG S GQLG + + P++++
Sbjct: 1 MPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVK 59
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG 119
+L G+ + Q++AGG HS A + G + WG N GQ+ + G
Sbjct: 60 SLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALRG 100
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P +I+AL+G+ ++Q+S G +HS A ++DG +++WG N+ GQ+G+ GK P +
Sbjct: 2 PTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKS 60
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
E I + VA G H+ AL + +G G N QL++
Sbjct: 61 LE-----GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLAL 98
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN---C 198
IK++ V+CG H+LAL +D ++ G N QL +G ++P+ VK+
Sbjct: 11 IKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQ------AIPQKVKSLEGI 64
Query: 199 PIVKLFAEHWNSARLSV 215
P+ ++ A +S LS+
Sbjct: 65 PLAQVAAGGTHSFALSL 81
>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
Length = 1348
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISA 90
T +ACG H LALT G VFS+G G+ G LG+ G N + PR + AL G+GV QI+A
Sbjct: 337 TSVACGAGHTLALTANGRVFSFGRGAFGALGH---GDRLNCDVPRLVDALWGVGVAQIAA 393
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD-PHPMSWSEDFDSQNIKVVDVAC 149
G HSA+ + G +Y WG G+ G G D+ P P+ + D ++ +AC
Sbjct: 394 GDNHSASLSASGRVYTWGR---GKYGALGHRDVDNRSRPTPV---QALDDAGVRCEQIAC 447
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
G HTLA+ S W + G G +
Sbjct: 448 GGDHTLAIAGGGSGVLLAWGRGSSGPAGTGAT 479
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 13/177 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGN--GSRGQLGYPSSGTDAN 71
++ + P + VT +A G H +A+T G V+++G+ G L P+ +A
Sbjct: 193 AEAYPTPRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAV 252
Query: 72 MEPREIRALSGL--GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD------- 122
++P E+ A + V ++ G H AA T G L +WG GQ+G D
Sbjct: 253 IDPPEVTATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDA 312
Query: 123 --LVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
L+ S ++K VACG+ HTLAL + ++ G + L G
Sbjct: 313 KSLIRRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHG 369
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +D + V IA G +H +L+ G V++WG G G LG+ D P ++
Sbjct: 376 VPRLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGH--RDVDNRSRPTPVQ 433
Query: 79 ALSGLGVV--QISAGGWHSAART--QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
AL GV QI+ GG H+ A G L AWG + G G D++ P + +
Sbjct: 434 ALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLT--PTIIDRA 491
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D KV ++ GS+H++A+ + ++ G QL
Sbjct: 492 LLGDE---KVFQISAGSKHSVAVTEGGCVYTWGARTQGQL 528
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 32/188 (17%)
Query: 7 SGPLKMLSQVFHMP--SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY- 63
S P ++ V P + + + V T +ACG HC A+T G++ SWGN GQLG
Sbjct: 243 SAPTRLREAVIDPPEVTATTNAMPRVAT-VACGQRHCAAVTTSGVLLSWGNEEFGQLGQG 301
Query: 64 -----PSSG---------TDANMEPREIRALSGLGVVQ---ISAGGWHSAARTQDGFLYA 106
S G DA+M PR L G G V+ ++ G H+ A T +G +++
Sbjct: 302 PPRDSSSKGDAKSLIRRRADASMMPR----LVGSGHVKFTSVACGAGHTLALTANGRVFS 357
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
+G G +G +L+ V W + V +A G H+ +L ++
Sbjct: 358 FGRGAFGALGHGDRLNCDVPRLVDALW-------GVGVAQIAAGDNHSASLSASGRVYTW 410
Query: 167 GWNEYNQL 174
G +Y L
Sbjct: 411 GRGKYGAL 418
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 50 VFSWGNGSRGQLGY------------PSSGTDANMEPREIRALSGLGVVQISAGGWHSAA 97
+++WG GQLG+ S +A PR + +L G V ++ G HS A
Sbjct: 163 LYAWGRCDAGQLGFGAGGFGAPTSRDSSEAAEAYPTPRSVSSLDGRDVTHVAGGARHSVA 222
Query: 98 RTQDGFLYAWG--WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTL 155
T G +YA+G G + +L V DP ++ + + +V VACG RH
Sbjct: 223 VTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTN---AMPRVATVACGQRHCA 279
Query: 156 ALCDDNSLWGCGWNEYNQLSMG 177
A+ L G E+ QL G
Sbjct: 280 AVTTSGVLLSWGNEEFGQLGQG 301
>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
rubripes]
Length = 531
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRA-LSGL 83
L+ VT++ACG H +ALT G V++WG + GQ+G SG+ AN PR + + L
Sbjct: 125 LLNRKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVG---SGSTANQPTPRRVSSCLQNR 181
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
V I G S A +G +Y WG+N GQ+G+ ++ + ++ Q +
Sbjct: 182 VAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLG-------NNGNQLTPCRLVALQGLC 234
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS---VMTRLSVPEHVKNCPI 200
V V G H+LAL D+ L+ G N Y QL G +Q+S +MT + C
Sbjct: 235 VQQVVSGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQIMTEKERIVEIAACHS 294
Query: 201 VKLFAEHWNSARLSVPEHAKDSSIVKLFAGHW 232
A S ++ + + SI+ + H+
Sbjct: 295 THTSAAKTQSGQVYMWGQCRGQSIILPYLTHF 326
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG-GWHSAA 97
+ + +T + V+++G LG + + + P+++ LSG VV +S G G H
Sbjct: 32 NEAIYITSDDEVYAFGLNCSNCLG--TGDSQCTIVPKKVDILSGRKVVSLSYGSGPHILL 89
Query: 98 RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
T+DG L+AWG N Q+G G + V P+ S N KV +VACGS H++AL
Sbjct: 90 ATEDGELFAWGHNGYSQLG-NGTTNQGV---APVLVSATL--LNRKVTEVACGSHHSMAL 143
Query: 158 CDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
D ++ G+N Q+ G +Q P V +C
Sbjct: 144 TDSGEVYAWGYNNCGQVGSGSTANQ-------PTPRRVSSC 177
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ L V + G+ H LALT EG++++WG + GQLG +G +N + P +I
Sbjct: 224 PCRLVALQGLCVQQVVSGYAHSLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPVQIM 280
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+V+I+A SAA+TQ G +Y WG G +
Sbjct: 281 T-EKERIVEIAACHSTHTSAAKTQSGQVYMWGQCRGQSI 318
>gi|389742775|gb|EIM83961.1| RCC1/BLIP-II [Stereum hirsutum FP-91666 SS1]
Length = 463
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + F + +ACG DH LALT G V++WGNG QLG ME R+
Sbjct: 136 PTALPAFSKSQICSVACGEDHVLALTTFGTVYTWGNGVNFQLGRKI------MERRKANG 189
Query: 80 LSG-----LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPM 131
L +V ++AG HS A + G +YAWG N Q GV +G V P +
Sbjct: 190 LRPEPLPLKDIVLVAAGHHHSFAVDKKGVVYAWGLNQMRQCGVSNAKGGNQSHVTAPTEV 249
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+V+ + G HT+ L D+ +WGCG + +L +
Sbjct: 250 EALNPAKHDGARVIQIGRGEHHTIFLLDNGEVWGCGRADAGRLGL 294
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 22/166 (13%)
Query: 27 LDLVVTDIACGFDHC-LALTQEGIVFSWGN-GSRGQLGYPSSGTDAN--MEPREIRALSG 82
LD T D C +AL+ +G + +WG+ S G LG+ A +EP + A S
Sbjct: 85 LDGFRTTFIAASDSCSIALSDKGELRAWGSFSSDGILGFDGIREHAMKVLEPTALPAFSK 144
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWG----WNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+ ++ G H A T G +Y WG + G ++ K + + +P P+
Sbjct: 145 SQICSVACGEDHVLALTTFGTVYTWGNGVNFQLGRKIMERRKANGLRPEPLPLK------ 198
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+V VA G H+ A+ ++ G N+ Q CGVS
Sbjct: 199 ----DIVLVAAGHHHSFAVDKKGVVYAWGLNQMRQ----CGVSNAK 236
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR-EI 77
+PS + F + I+ G + LA + GI++SWG G QLG +A++ R
Sbjct: 374 LPSYKEGFSSTKIVGISSGSRYNLAWDESGILYSWGEGVSNQLGLGPKTEEAHLPTRVHN 433
Query: 78 RALSGLGVVQISAGGWH 94
AL VV SAGG H
Sbjct: 434 TALKTWKVVGASAGGQH 450
>gi|402571800|ref|YP_006621143.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Desulfosporosinus meridiei DSM 13257]
gi|402252997|gb|AFQ43272.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Desulfosporosinus meridiei DSM 13257]
Length = 740
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
++ I+ GF H LAL +G V++WG+ S GQLG S + P ++ L+ V+ ++A
Sbjct: 49 LSTISAGFVHSLALDSDGSVWAWGDNSEGQLGNNRSDLHNSATPVKVNDLT--NVIAVAA 106
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH---PMSWSEDFDSQNIK---- 143
GG HS A +DG ++ WG N GQ G GK++L+ P P + + ++
Sbjct: 107 GGAHSLALKKDGTVWGWGNNEYGQGGY-GKIELIAGGPSYYMPDEFLRSYTPLQVQGLTD 165
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEY-NQLSMGCG 179
++ +A G ++LAL D ++W G Y NQL+ G
Sbjct: 166 IIAIAAGMDYSLALKSDGTVWAWGSEPYGNQLTNTSG 202
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 21/177 (11%)
Query: 5 LASGPLKMLSQVF---HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQL 61
+A GP + F + P ++ D++ IA G D+ LAL +G V++WG+ G
Sbjct: 139 IAGGPSYYMPDEFLRSYTPLQVQGLTDIIA--IAAGMDYSLALKSDGTVWAWGSEPYGNQ 196
Query: 62 GYPSSGTDANMEPREIRALSG----LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
+SG +N+ P +I+ S + +ISAG + A +DG ++ WG G V
Sbjct: 197 LTNTSGGFSNI-PAQIQIDSYGNKLTDITKISAGSAFALALKKDGTVWTWG---GLLVDD 252
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+G + V H +S S+ VV ++ G H+LAL D ++WG G N+ QL
Sbjct: 253 QGVHNSVAHAQQVLSLSD--------VVSISAGYSHSLALKSDGTVWGWGSNDLFQL 301
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ-IS 89
V I+ G+ H LAL +G V+ WG+ QLG +S + + P +I SGL V I
Sbjct: 271 VVSISAGYSHSLALKSDGTVWGWGSNDLFQLGDRNSAENWST-PLQI---SGLNHVHGIV 326
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG + S A DG +++WG N GQ+G + +P+ E + V +A
Sbjct: 327 AGTYLSMALKTDGTVWSWGANIWGQLGNAADFETEPLVKNPVQVKELKN-----VTAIAS 381
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQ 173
G +A + S+W G N Q
Sbjct: 382 GFGFNIARQNGGSIWAWGVNSDGQ 405
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+D + L V DIACG H +T G +++WG+ G G+ + P+ +
Sbjct: 102 PKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDT-EGHQYTPKLLER 160
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LSG VVQ+SA G+H+ T G +Y WG G++G + + H P +
Sbjct: 161 LSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERN--CHSPRLVE-----TL 213
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ V ++CG H+ + D ++ G E+ QL G V++V
Sbjct: 214 LGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVK 258
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 19/169 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQI 88
VV ACGF H LT G V++WG G G+LG+ G + N PR + L G VQI
Sbjct: 166 VVQLSACGF-HTGCLTDAGEVYTWGEGKFGRLGH---GAERNCHSPRLVETLLGKRPVQI 221
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
S GG+HSA T DG +Y +G GQ+G K++ V + +D D + + +
Sbjct: 222 SCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKV-----KPTLVKDLD--GVFLTQIT 274
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
CG H++AL + ++ G ++ +L GCG ++S P+ V+
Sbjct: 275 CGWSHSVALTSSHEVYTWGNGDHGKLGHGCG-------KKVSTPQLVEK 316
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 22 RMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
R+ H L V+T + CG H A++ +G +F+WG G G+LG+ + + P+ + +L
Sbjct: 51 RLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGGGMYGKLGHGNE--SGHSTPKRVDSL 108
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ 140
GL VV I+ G H+A T G LY WG + GV G D H P E +
Sbjct: 109 VGLAVVDIACGSRHTAIVTSRGCLYTWGDK---ENGVAGHGDTEGHQYTP-KLLERLSGK 164
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+VV ++ HT L D ++ G ++ +L G
Sbjct: 165 --RVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHG 199
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFL 104
T G V++WG G G+LG+ +G PR +L+G + ++ G +H+AA + G L
Sbjct: 23 THGGGVYTWGRGDDGRLGHGDNG--WKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNL 80
Query: 105 YAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ-NIKVVDVACGSRHTLALCDDNSL 163
+ WG GG G G + H S + DS + VVD+ACGSRHT + L
Sbjct: 81 FTWG---GGMYGKLGHGNESGH-----STPKRVDSLVGLAVVDIACGSRHTAIVTSRGCL 132
Query: 164 WGCGWNE 170
+ G E
Sbjct: 133 YTWGDKE 139
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPRE 76
H P ++ L I+CG H +T +G ++++G G GQLG+ G N ++P
Sbjct: 205 HSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGH---GDKVNKVKPTL 261
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
++ L G+ + QI+ G HS A T +Y WG + G++G
Sbjct: 262 VKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLG 301
>gi|449447436|ref|XP_004141474.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 87/163 (53%), Gaps = 19/163 (11%)
Query: 23 MDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRAL 80
+D +LV +T ++CG H A+++ G V++WG GS GQLG+ S D + PR + AL
Sbjct: 219 LDEAPELVTITKVSCGEYHSAAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVAL 278
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDF 137
G+ V I+ GG H+ A TQ+G LYAWG GQ+GV G + D SE F
Sbjct: 279 DGICVKDIACGGVHTCAITQNGSLYAWGGGQVGQLGVGPQTGFFSCIAGD------SETF 332
Query: 138 DSQNIKVV-------DVACGSRHTLALCDDNSLWGCGWNEYNQ 173
+N+ VV VACG HTL D + G G+N Y Q
Sbjct: 333 -LRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIHGWGYNSYGQ 374
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 105/248 (42%), Gaps = 51/248 (20%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
DH P ++ +F P ++ DIACG +H A+ +G +F+WG GQLG
Sbjct: 38 DHQLRVPRQLHPDLFGCPGEINSRW----LDIACGREHTAAVASDGSLFTWGANDFGQLG 93
Query: 63 YPSSGTDANME-PREIRALSGLGVVQISAGGWHSAA----RTQDGF-----LYAWGWNNG 112
GT+ + P+++ L G V +S G +AA R DG L+ WG N G
Sbjct: 94 ---DGTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTCRLWIWGQNQG 150
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
P + F Q I + V+CG+ H +AL DD L G+NEY
Sbjct: 151 SNF--------------PRLFWGAFTPQTI-IRQVSCGAVHVVALSDDGQLQAWGYNEYG 195
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHW 232
QL G E ++ I+ FA+ + A PE +I K+ G +
Sbjct: 196 QLGRGV------------TSEGLQGARIINAFAKFLDEA----PELV---TITKVSCGEY 236
Query: 233 NSGILVQS 240
+S + ++
Sbjct: 237 HSAAISEN 244
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG------- 82
++ ++CG H +AL+ +G + +WG GQLG + ++ R I A +
Sbjct: 166 IIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVT-SEGLQGARIINAFAKFLDEAPE 224
Query: 83 -LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
+ + ++S G +HSAA +++G +Y WG + GQ+G L D +
Sbjct: 225 LVTITKVSCGEYHSAAISENGEVYTWGLGSMGQLG---HCSLQSADKELIP-RRVVALDG 280
Query: 142 IKVVDVACGSRHTLALCDDNSLW 164
I V D+ACG HT A+ + SL+
Sbjct: 281 ICVKDIACGGVHTCAITQNGSLY 303
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSW-GNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + V DIACG H A+TQ G +++W G P +G + +
Sbjct: 271 IPRRVVALDGICVKDIACGGVHTCAITQNGSLYAWGGGQVGQLGVGPQTGFFSCIAGDSE 330
Query: 78 RALSGLGVVQISAGGWHSA-------ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
L L VV +S G H A T+DG ++ WG+N+ GQ E P P
Sbjct: 331 TFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIHGWGYNSYGQAANEKS--TYAWYPSP 388
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ W +V +A G H+ L D SL
Sbjct: 389 VDWCVG------EVRKLAAGGGHSAVLTDACSL 415
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDP---HPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
+Y WG+N GQ G +GK D + P HP + + N + +D+ACG HT A+ D
Sbjct: 21 IYVWGYNQSGQTGRKGK-DHQLRVPRQLHPDLFGCPGEI-NSRWLDIACGREHTAAVASD 78
Query: 161 NSLWGCGWNEYNQLSMG 177
SL+ G N++ QL G
Sbjct: 79 GSLFTWGANDFGQLGDG 95
>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 823
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIRALSGLGVVQIS 89
V + G H LAL +G V++WG+ GQLG GT M P ++ LSG VV ++
Sbjct: 670 VVSVVAGLYHSLALRSDGTVWAWGDNGSGQLG---DGTYFGQMLPVQVPGLSG--VVAVA 724
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AGG HS A DG ++AWG+N+ GQ+G +G +++ P P+ F SQ++ V+ VA
Sbjct: 725 AGGRHSLALRADGTVWAWGYNSNGQIG-DGSDASIIYRPSPV--KVLFSSQDV-VMGVAA 780
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
G H++A+ + G N+ QL + S +++P
Sbjct: 781 GDTHSVAVLSGGRVRTWGQNDSGQLGYATNNTDRSTPGEVTLP 823
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 11/147 (7%)
Query: 23 MDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG 82
+D +VV +A G H LA+ + +++WG GQLG S T ++ P ++ +G
Sbjct: 83 VDFSNGMVVKRVAAGGSHALAVLSDKTLWAWGRNGDGQLGVGS--TTSSFSPVKVPGRTG 140
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ VV ++A ++SAA DG + WG+N GQ+G D P+ S D + +
Sbjct: 141 VEVVAMAASTFNSAAVLSDGKVLTWGYNAYGQLGNGSTTD----QSSPVEVSALSDIKGV 196
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWN 169
V G H LAL ++W G+N
Sbjct: 197 SV-----GKYHMLALRSGGTVWAWGFN 218
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ G H LAL G V++WG GQLG S P++ L G V +SA
Sbjct: 193 IKGVSVGKYHMLALRSGGTVWAWGFNGSGQLGLGSGSNTQYNTPQQAAVLKG--VASVSA 250
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A DG ++AWG NN GQ+G+ D P P+ + VV+VA G
Sbjct: 251 GDSHSLALRWDGTVWAWGQNNQGQLGIGSFTD----RPSPVQ-----VPRLTGVVEVAAG 301
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
H LAL D ++W G+N QL G +S+ S
Sbjct: 302 QFHALALRLDGTVWAWGFNGSGQLGDGTTLSRSS 335
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++A G H LAL +G V++WG GQLG + T + P ++ L+G VV ++A
Sbjct: 295 VVEVAAGQFHALALRLDGTVWAWGFNGSGQLGDGT--TLSRSSPVQVPGLTG--VVSVAA 350
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
G HS A DG +Y WG N+ GQ+G +G D + PHP
Sbjct: 351 GDGHSVAVLSDGRVYTWGRNSAGQLG-DGSQDAL---PHPT 387
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 10/168 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G + L +G V++WG S GQLG ++ P + +G+ V +++AGG H
Sbjct: 43 AAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAPVDFS--NGMVVKRVAAGGSH 100
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
+ A D L+AWG N GQ+GV P ++VV +A + ++
Sbjct: 101 ALAVLSDKTLWAWGRNGDGQLGVGSTTSSFSPVKVP-------GRTGVEVVAMAASTFNS 153
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVK 202
A+ D + G+N Y QL G Q S + +S +K + K
Sbjct: 154 AAVLSDGKVLTWGYNAYGQLGNGSTTDQSSPV-EVSALSDIKGVSVGK 200
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
H L + G V +WG GQ+G P+ + EP + ++ G ++AG H
Sbjct: 575 HSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLFSILG-----VAAGQNH 629
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A DG ++AWG NN GQ+G +G L V P+ + + +VV V G H+
Sbjct: 630 SLALRSDGTVWAWGRNNSGQLG-DGSL---VDRTRPVQVA-----RLNRVVSVVAGLYHS 680
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
LAL D ++W G N QL G Q M + VP
Sbjct: 681 LALRSDGTVWAWGDNGSGQLGDGTYFGQ---MLPVQVP 715
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++A G H LAL +G ++SWG+ S QLG + P + +SG+ V
Sbjct: 514 VKNVAAGGFHSLALGSDGKLWSWGSNSLSQLGVSRDTLGSRASPALVSGVSGVVAVAAGE 573
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
HS +G + AWG+N GQ+G D P S + ++ VA G
Sbjct: 574 T--HSLVVLSNGKVSAWGYNGYGQIG-----DGCSPVPTFYCSSPTEPTNLFSILGVAAG 626
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
H+LAL D ++W G N QL G
Sbjct: 627 QNHSLALRSDGTVWAWGRNNSGQLGDG 653
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L + G L +G +++WG+ GQLG S T + P + S V +
Sbjct: 460 LETPRLVAGAKFTLFQKNDGKLWAWGHNFSGQLGDDS--TVNRLTPVSVSTASLTDVKNV 517
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+AGG+HS A DG L++WG N+ Q+GV D S S VV VA
Sbjct: 518 AAGGFHSLALGSDGKLWSWGSNSLSQLGVS-------RDTLGSRASPALVSGVSGVVAVA 570
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
G H+L + + + G+N Y Q+ GC
Sbjct: 571 AGETHSLVVLSNGKVSAWGYNGYGQIGDGC 600
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ AG + + DG L+AWG N GQ+G D V+ P+S S + V +
Sbjct: 464 RLVAGAKFTLFQKNDGKLWAWGHNFSGQLGD----DSTVNRLTPVSVST---ASLTDVKN 516
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
VA G H+LAL D LW G N +QL GVS+ ++ +R S
Sbjct: 517 VAAGGFHSLALGSDGKLWSWGSNSLSQL----GVSRDTLGSRAS 556
>gi|413924970|gb|AFW64902.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 261
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 9/173 (5%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGG 92
+ACG H L LTQ G VF+ G GQLG +S T +EP EI VV++SAG
Sbjct: 68 SLACGGAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHM-LEPVEISGFHER-VVEVSAGN 125
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
HS A T DG L+ WG N+GGQ+G+ VV P + D ++V VA GS
Sbjct: 126 HHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTD-----LRVKTVALGSE 180
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG--CGVSQVSVMTRLSVPEHVKNCPIVKL 203
H++A+ ++ + G +L G + S+ + P +KN +K+
Sbjct: 181 HSIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKI 233
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 8 GPLKMLSQVFHM--PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
G L + + V HM P + F + VV +++ G H A+T +G +F WG S GQLG
Sbjct: 94 GQLGIGTSVTHMLEPVEISGFHERVV-EVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGK 152
Query: 66 SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
P ++ L+ L V ++ G HS A T++G + +WG G++G + ++
Sbjct: 153 GAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILG 212
Query: 126 HDPHPMSWS----EDFDSQNIKVVDVACGSRHT 154
++ ++FD IK+ +A G H+
Sbjct: 213 FSLTSTEYTPRLIKNFD--GIKIKKIAAGMLHS 243
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 34/193 (17%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPRE---IRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
WGNG G+LG S ++ P A + ++ GG H+ TQ+G ++A G
Sbjct: 33 WGNGDYGRLGLGS--LESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQNGRVFATGL 90
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ GQ+G+ V H P+ + + +VV+V+ G+ H+ A+ D L+ G N
Sbjct: 91 NDFGQLGIGTS---VTHMLEPV----EISGFHERVVEVSAGNHHSCAVTADGKLFVWGRN 143
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK-----NCPIVKLFAEH------------WNSAR 212
QL +G G +V +S P V V L +EH W +A
Sbjct: 144 SGGQLGLGKGAGKV-----VSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAAG 198
Query: 213 LSVPEHAKDSSIV 225
H + SSI+
Sbjct: 199 SGRLGHGRQSSIL 211
>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 422
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG H L LTQ G VF+ G GQLG SS T ++P E+ G VVQISAG
Sbjct: 75 LACGGAHTLFLTQSGRVFATGLNDFGQLGIGSSTTHI-VDPIEVTGF-GEKVVQISAGNH 132
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A T DG L+ WG N+ GQ+G+ + VV P + + D ++V VA GS H
Sbjct: 133 HSCAVTADGELFVWGKNSSGQLGLGKGVGKVVSTPRKVDYLAD-----VRVRMVALGSEH 187
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG--CGVSQVSVMTRLSVPEHVKNCPIVKL 203
++A+ + G +L G + +++ P +KN VK+
Sbjct: 188 SIAVTEGGEALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKI 239
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-- 68
K + +V P ++D+ D+ V +A G +H +A+T+ G SWG G+LG+ +
Sbjct: 158 KGVGKVVSTPRKVDYLADVRVRMVALGSEHSIAVTEGGEALSWGAAGAGRLGHGHKSSIL 217
Query: 69 -----DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
+ PR I+ L G+ + +I+AG HSA + G L+ +G E
Sbjct: 218 GFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK------TEKVFGR 271
Query: 124 VVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P P E S+ +VACG HT AL D L+ G NE L +G
Sbjct: 272 SNDAPRPTVVEEIQFSE-----EVACGGYHTCALTDGGDLYSWGSNENGCLGLG 320
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 9/194 (4%)
Query: 8 GPLKMLSQVFHM--PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
G L + S H+ P + F + VV I+ G H A+T +G +F WG S GQLG
Sbjct: 100 GQLGIGSSTTHIVDPIEVTGFGEKVV-QISAGNHHSCAVTADGELFVWGKNSSGQLGLGK 158
Query: 66 SGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV- 124
PR++ L+ + V ++ G HS A T+ G +WG G++G K ++
Sbjct: 159 GVGKVVSTPRKVDYLADVRVRMVALGSEHSIAVTEGGEALSWGAAGAGRLGHGHKSSILG 218
Query: 125 ---VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
V + ++ D +K+ +A G H+ + + +L+ G
Sbjct: 219 FGMVSSEYTPRLIKNLD--GVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKVFGRSNDAP 276
Query: 182 QVSVMTRLSVPEHV 195
+ +V+ + E V
Sbjct: 277 RPTVVEEIQFSEEV 290
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 17/154 (11%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPRE---IRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
WGNG G+LG + ++ P A +G ++ GG H+ TQ G ++A G
Sbjct: 39 WGNGDYGRLGLGA--LESRWNPTACPFFLARAGDPPASLACGGAHTLFLTQSGRVFATGL 96
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ GQ+G+ +V + E KVV ++ G+ H+ A+ D L+ G N
Sbjct: 97 NDFGQLGIGSSTTHIVDPIEVTGFGE-------KVVQISAGNHHSCAVTADGELFVWGKN 149
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
QL +G GV +V +S P V V++
Sbjct: 150 SSGQLGLGKGVGKV-----VSTPRKVDYLADVRV 178
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 23/140 (16%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAG 91
++ACG H ALT G ++SWG+ G LG +G + P +R+ L L V ++S G
Sbjct: 289 EVACGGYHTCALTDGGDLYSWGSNENGCLGLGVTGMVRS--PEVLRSTLFKLPVSKVSCG 346
Query: 92 GWHSAARTQDGFLYAWGW------------NNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
H+A + + +Y WGW ++GGQ+G +D PM
Sbjct: 347 WKHTAVISGED-IYTWGWGGANGTFFEEGQSSGGQLGHGNDVDYF----EPMMVEL---G 398
Query: 140 QNIKVVDVACGSRHTLALCD 159
+N + V V+CG HT A+ +
Sbjct: 399 RNARAVHVSCGFNHTGAIFE 418
>gi|449481391|ref|XP_004156169.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 87/163 (53%), Gaps = 19/163 (11%)
Query: 23 MDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRAL 80
+D +LV +T ++CG H A+++ G V++WG GS GQLG+ S D + PR + AL
Sbjct: 219 LDEAPELVTITKVSCGEYHSAAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVAL 278
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDF 137
G+ V I+ GG H+ A TQ+G LYAWG GQ+GV G + D SE F
Sbjct: 279 DGICVKDIACGGVHTCAITQNGSLYAWGGGQVGQLGVGPQTGFFSCIAGD------SETF 332
Query: 138 DSQNIKVV-------DVACGSRHTLALCDDNSLWGCGWNEYNQ 173
+N+ VV VACG HTL D + G G+N Y Q
Sbjct: 333 -LRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIHGWGYNSYGQ 374
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 105/248 (42%), Gaps = 51/248 (20%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
DH P ++ +F P ++ DIACG +H A+ +G +F+WG GQLG
Sbjct: 38 DHQLRVPRQLHPDLFGCPGEINSRW----LDIACGREHTAAVASDGSLFTWGANDFGQLG 93
Query: 63 YPSSGTDANME-PREIRALSGLGVVQISAGGWHSAA----RTQDGF-----LYAWGWNNG 112
GT+ + P+++ L G V +S G +AA R DG L+ WG N G
Sbjct: 94 ---DGTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTRRLWIWGQNQG 150
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
P + F Q I + V+CG+ H +AL DD L G+NEY
Sbjct: 151 SNF--------------PRLFWGAFTPQTI-IRQVSCGAVHVVALSDDGQLQAWGYNEYG 195
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHW 232
QL G E ++ I+ FA+ + A PE +I K+ G +
Sbjct: 196 QLGRGV------------TSEGLQGARIINAFAKFLDEA----PELV---TITKVSCGEY 236
Query: 233 NSGILVQS 240
+S + ++
Sbjct: 237 HSAAISEN 244
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG------- 82
++ ++CG H +AL+ +G + +WG GQLG + ++ R I A +
Sbjct: 166 IIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVT-SEGLQGARIINAFAKFLDEAPE 224
Query: 83 -LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
+ + ++S G +HSAA +++G +Y WG + GQ+G L D +
Sbjct: 225 LVTITKVSCGEYHSAAISENGEVYTWGLGSMGQLG---HCSLQSADKELIP-RRVVALDG 280
Query: 142 IKVVDVACGSRHTLALCDDNSLW 164
I V D+ACG HT A+ + SL+
Sbjct: 281 ICVKDIACGGVHTCAITQNGSLY 303
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSW-GNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + V DIACG H A+TQ G +++W G P +G + +
Sbjct: 271 IPRRVVALDGICVKDIACGGVHTCAITQNGSLYAWGGGQVGQLGVGPQTGFFSCIAGDSE 330
Query: 78 RALSGLGVVQISAGGWHSA-------ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
L L VV +S G H A T+DG ++ WG+N+ GQ E P P
Sbjct: 331 TFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIHGWGYNSYGQAANEKS--TYAWYPSP 388
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ W +V +A G H+ L D SL
Sbjct: 389 VDWCVG------EVRKLAAGGGHSAVLTDACSL 415
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDP---HPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
+Y WG+N GQ G +GK D + P HP + + N + +D+ACG HT A+ D
Sbjct: 21 IYVWGYNQSGQTGRKGK-DHQLRVPRQLHPDLFGCPGEI-NSRWLDIACGREHTAAVASD 78
Query: 161 NSLWGCGWNEYNQLSMG 177
SL+ G N++ QL G
Sbjct: 79 GSLFTWGANDFGQLGDG 95
>gi|341881694|gb|EGT37629.1| CBN-GLO-4 protein [Caenorhabditis brenneri]
Length = 1384
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 23 MDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG 82
+ HFLD + DIACG H +T EG +++WG G QLG+ + MEP ++ +G
Sbjct: 1011 VKHFLDGAIVDIACGLSHSALITSEGSLYTWGKGLDYQLGH--GNKNERMEPHQVFEPTG 1068
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
+S G H+ T+DG +YAWG N+ GQ GV K
Sbjct: 1069 ATWTNVSLGNNHTIGATEDGTVYAWGKNDFGQCGVVTK 1106
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG--LGVVQISAG 91
IACG +H L L+ G + +WG GQ G S AN++ + G + +I+ G
Sbjct: 774 IACGAEHILVLSSSGQLSAWGGNRYGQCGVGHSFRLANLQ-----QVDGDWPAIEKIACG 828
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
+HSA DG L+ +GW GQ+G G+ + + P + + K+ VACG
Sbjct: 829 QFHSAFVCADGSLWTFGWGIWGQLGQGGRFNSNLLIP------KKVNGLISKITHVACGR 882
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
HT+AL D+ + CG Y Q+ + + + T L + VK A H+
Sbjct: 883 AHTVALTDNGRVLICGSGSYGQMGVDEDIKKTFSFTTLPL-----GTLRVKFIATHY 934
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 75/190 (39%), Gaps = 49/190 (25%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWG---------------------------------N 55
L V IA + H L +T + +F WG N
Sbjct: 925 LRVKFIATHYYHSLCVTDDDRIFEWGRNPQELKMRMFVMKKIRSAQIKNSEDPSSPLPTN 984
Query: 56 GSRG-----QLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWN 110
G+ G L P+ ++ RE++ +V I+ G HSA T +G LY WG
Sbjct: 985 GTNGVTPRINLNLPAEIPRDDLGLREVKHFLDGAIVDIACGLSHSALITSEGSLYTWGKG 1044
Query: 111 NGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
Q+G K + + +PH + F+ +V+ G+ HT+ +D +++ G N+
Sbjct: 1045 LDYQLGHGNKNERM--EPHQV-----FEPTGATWTNVSLGNNHTIGATEDGTVYAWGKND 1097
Query: 171 YNQLSMGCGV 180
+ Q CGV
Sbjct: 1098 FGQ----CGV 1103
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 71/180 (39%), Gaps = 49/180 (27%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR---EIRALSGLGVVQ 87
+T +ACG H +ALT G V G+GS GQ+ G D +++ L L V
Sbjct: 875 ITHVACGRAHTVALTDNGRVLICGSGSYGQM-----GVDEDIKKTFSFTTLPLGTLRVKF 929
Query: 88 ISAGGWHSAARTQDGFLYAWGWN------------------------------NGGQVGV 117
I+ +HS T D ++ WG N G GV
Sbjct: 930 IATHYYHSLCVTDDDRIFEWGRNPQELKMRMFVMKKIRSAQIKNSEDPSSPLPTNGTNGV 989
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIK------VVDVACGSRHTLALCDDNSL--WGCGWN 169
+++L + P +D + +K +VD+ACG H+ + + SL WG G +
Sbjct: 990 TPRINLNLPAEIP---RDDLGLREVKHFLDGAIVDIACGLSHSALITSEGSLYTWGKGLD 1046
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 57/155 (36%), Gaps = 29/155 (18%)
Query: 43 ALTQEGIVFSWGNGSRGQL------------------GYPSSGTDANME--PREIRALSG 82
A+T++ + WGN + Q G P+ T + PR + G
Sbjct: 710 AITEDDRIMIWGNFTNAQQRMEIPQNAKSKRADSVTNGAPAMPTPKPEQQLPRVLEYPGG 769
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
V I+ G H + G L AWG N GQ GV L W
Sbjct: 770 RPRV-IACGAEHILVLSSSGQLSAWGGNRYGQCGVGHSFRLANLQQVDGDWP-------- 820
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +ACG H+ +C D SLW GW + QL G
Sbjct: 821 AIEKIACGQFHSAFVCADGSLWTFGWGIWGQLGQG 855
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IACG H + +G ++++G G GQLG + P+++ L + ++
Sbjct: 822 IEKIACGQFHSAFVCADGSLWTFGWGIWGQLGQGGRFNSNLLIPKKVNGLIS-KITHVAC 880
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+ A T +G + G + GQ+GV+ + S++ ++V +A
Sbjct: 881 GRAHTVALTDNGRVLICGSGSYGQMGVDEDIK------KTFSFTT-LPLGTLRVKFIATH 933
Query: 151 SRHTLALCDDNSLWGCGWN 169
H+L + DD+ ++ G N
Sbjct: 934 YYHSLCVTDDDRIFEWGRN 952
>gi|157112353|ref|XP_001651804.1| hypothetical protein AaeL_AAEL006116 [Aedes aegypti]
gi|108878111|gb|EAT42336.1| AAEL006116-PA [Aedes aegypti]
Length = 1973
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
LDL V + CG H L LT G V+S G + GQLG + +A ++P +++L G+ +
Sbjct: 1152 LDLEVLAVQCGRLHTLLLTNNG-VYSMGANNLGQLGIGNHVLNA-LQPMYVQSLDGMNIT 1209
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
I AG +H+A +G LY WGW GQ+G G + D + E F +NI+
Sbjct: 1210 HICAGQYHNAV-VANGLLYTWGWGIFGQLG-HGS----IADCSKPTIVEFFRKKNIQ--Q 1261
Query: 147 VACGSRHTLALC-----DDNSLWGCGWNEYNQLSMG 177
+A G HTL LC N L+ G N Y QL +G
Sbjct: 1262 IALGHAHTLVLCRQECNTKNVLYVFGSNHYGQLGLG 1297
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ I+ G H +T +++WG QLG G + + P ++ A++G+ V+
Sbjct: 1499 IVRISSGLYHFALVTSRSQIYTWGKNIERQLGR-EGGRNEVLIPTKLDAVTGVEYVE--C 1555
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVE 118
G + T+DG + +WG NN GQ E
Sbjct: 1556 GADFTLIMTEDGVVKSWGNNNMGQCAKE 1583
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L VV I
Sbjct: 224 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVVNI 280
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G L + P + Q I V VA
Sbjct: 281 ACGQMCSVAVVDNGEVYVWGYNGNGQLG----LGSSGNQSTPCRIAA---LQGICVQRVA 333
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 334 CGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQ-----SYPTPVAVEKDRIIEIAACH 387
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 16/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC----GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P R+D L IAC H + T EG +F+WG+ + QLG + T+ + P
Sbjct: 159 PRRLD---SLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLG--NGTTNHGLVPC 213
Query: 76 EIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 214 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVT 269
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV++ACG ++A+ D+ ++ G+N QL +G
Sbjct: 270 GCL--QNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLG 310
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG + P I
Sbjct: 264 IPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQST--PCRI 321
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +Y WG N+ GQ+G K + P P++ +D
Sbjct: 322 AALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQSY--PTPVAVEKD- 378
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 379 -----RIIEIAACHSTHTSA 393
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V+ WG S GQLG +G +N A
Sbjct: 318 PCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLG---TGNKSNQSYPTPVA 374
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 375 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 412
>gi|224120790|ref|XP_002330952.1| predicted protein [Populus trichocarpa]
gi|222873146|gb|EEF10277.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 86/160 (53%), Gaps = 13/160 (8%)
Query: 23 MDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRAL 80
+D +LV +T ++CG H A++++G V++WG G+ GQLG+ S D + PR + AL
Sbjct: 219 LDEAPELVKITQVSCGEYHTAAISEKGEVYTWGLGNMGQLGHTSLQSGDKELLPRRVVAL 278
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ 140
G+ + ++ GG H+ A TQ G LYAWG GQ+G+ + P S SE F +
Sbjct: 279 DGIFIKDVACGGVHTCAATQKGALYAWGGGQAGQLGLGPQTGSFSFIP---SESESF-LR 334
Query: 141 NIK-------VVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
NI V VACG HTL D + G G+N Y Q
Sbjct: 335 NIPALVVPTDVQHVACGHSHTLVSMRDGRIHGWGYNSYGQ 374
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 73/154 (47%), Gaps = 27/154 (17%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVVQISAG 91
DIACG +H A+ +G +F+WG GQLG GT D+ P++++ L V +S G
Sbjct: 65 DIACGREHTAAVASDGSLFTWGANEFGQLG---DGTEDSRKYPKKVKQLETEFVKSVSCG 121
Query: 92 GWHSAA----RTQDGF----LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
+AA R DG L+ WG N G +P + F S N
Sbjct: 122 AHCTAAIAEPRQNDGTILSRLWVWGQNQGSN--------------YPRLFCGAF-SPNTI 166
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ V+CG+ H +AL +D L G+NEY QL G
Sbjct: 167 ICQVSCGAVHVVALSEDGLLQAWGYNEYGQLGRG 200
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 21/149 (14%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG----- 82
+ ++ ++CG H +AL+++G++ +WG GQLG + + R I A +
Sbjct: 164 NTIICQVSCGAVHVVALSEDGLLQAWGYNEYGQLGRGFT-CEGLQGARVINAYAKFLDEA 222
Query: 83 ---LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG----VEGKLDLVVHDPHPMSWSE 135
+ + Q+S G +H+AA ++ G +Y WG N GQ+G G +L+ +
Sbjct: 223 PELVKITQVSCGEYHTAAISEKGEVYTWGLGNMGQLGHTSLQSGDKELLPRRVVAL---- 278
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLW 164
I + DVACG HT A +L+
Sbjct: 279 ----DGIFIKDVACGGVHTCAATQKGALY 303
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD---SQNIKVVDVACGSRHTLALCDD 160
+Y WG+N GQ G +GK D + P + E F N + +D+ACG HT A+ D
Sbjct: 22 IYVWGYNQSGQTGRKGK-DGQLRIPKQLP-PELFGCPAGANARWLDIACGREHTAAVASD 79
Query: 161 NSLWGCGWNEYNQLSMG 177
SL+ G NE+ QL G
Sbjct: 80 GSLFTWGANEFGQLGDG 96
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 20/155 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG---------SRGQLGYPSSGTD 69
+P R+ + + D+ACG H A TQ+G +++WG G G + S ++
Sbjct: 271 LPRRVVALDGIFIKDVACGGVHTCAATQKGALYAWGGGQAGQLGLGPQTGSFSFIPSESE 330
Query: 70 ANMEPREIRALSGLGVVQ-ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
+ + R I AL VQ ++ G H+ +DG ++ WG+N+ GQ E P
Sbjct: 331 SFL--RNIPALVVPTDVQHVACGHSHTLVSMRDGRIHGWGYNSYGQAANEK--STYAWYP 386
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
P+ W +V +A G H+ L D SL
Sbjct: 387 SPVDWCVG------EVRKLAAGGGHSAVLTDACSL 415
>gi|66825689|ref|XP_646199.1| hypothetical protein DDB_G0269700 [Dictyostelium discoideum AX4]
gi|60474263|gb|EAL72200.1| hypothetical protein DDB_G0269700 [Dictyostelium discoideum AX4]
Length = 873
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT----DANMEPREIRALSGLGVVQ 87
T ++CG DHCLALT G VF WG+ GQ+G + + D R +L+ + Q
Sbjct: 397 TQVSCGVDHCLALTNNGQVFGWGDNKYGQIGQLTFSSVIKIDTTTPIRIGESLTNEFITQ 456
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
IS+G +HS A T+ +YAWG N+ Q+G GK
Sbjct: 457 ISSGAYHSMALTKSSIIYAWGLNDKCQIGEIGK 489
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 105 YAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDN 161
Y WGWN G Q+G+ + ++ +V +P+ + S +FD+++I + G H+LA+
Sbjct: 24 YVWGWNEGRQLGIGHYQNGME-IVKEPYSLGGSHNFDTKSISI-----GMAHSLAIDSRG 77
Query: 162 SLWGCGWNEYNQLSMGCGVSQ 182
L+ CG Y +L +G +SQ
Sbjct: 78 QLYSCGKTAYGRLGLGDYLSQ 98
Score = 37.7 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 16/105 (15%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD------LVVH-----DPHPMSW 133
V +IS G HSA T++ L+ +G N+ GQ+G +G ++ V++ +P+ +
Sbjct: 150 VNKISCGSAHSAFITENFQLFTFGKNDQGQLG-QGLINELHSPKRVIYIQYSFNPNEIDQ 208
Query: 134 SEDFDSQNIKVVD----VACGSRHTLALCDDNSLWGCGWNEYNQL 174
S+ ++ D VACG HT+ D ++ G N+++QL
Sbjct: 209 SKAITEKSTNYHDNVDLVACGLNHTVFSLKDGCVYSMGSNKFSQL 253
>gi|348518257|ref|XP_003446648.1| PREDICTED: alsin-like [Oreochromis niloticus]
Length = 1863
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L V +A G H + L + G V+S+G +L + S +P A
Sbjct: 216 PERL--LLPRPVLQVALGSQHGVLLVEGGQVYSFG-----ELPWKQSQVPEPTKPTLESA 268
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LSG VV ++AG +HS A T+DG ++ WG N+ GQ G+ G V +P P++ +D D+
Sbjct: 269 LSGQRVVTVAAGSFHSGAVTEDGGIHMWGENSAGQCGLSGL--STVPNPTPVAL-QDLDT 325
Query: 140 -----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
Q V+++ACG +HTLAL +W W QL + V V
Sbjct: 326 VTVPPQMAPVLELACGEKHTLALSVQREVW--AWGSGCQLGLNAAVFPV 372
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
DH + T + V+SWG+G GQLG+ A ++P I++L+ VV+++AG HS A
Sbjct: 703 DHQVLPTLQTEVWSWGHGEHGQLGH--GDNLARLQPLCIKSLNNKEVVRVAAGAHHSLAL 760
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD-SQNIKVVDVACGSRHTLAL 157
T +++WG N+ GQ+G H P + S+ I+V DV+ G RHTL L
Sbjct: 761 TAQSQVFSWGSNSSGQLG---------HMESPSTVPRLAKLSEGIRVWDVSAGERHTLLL 811
Query: 158 CD 159
D
Sbjct: 812 AD 813
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +A G H LALT + VFSWG+ S GQLG+ S + PR + G+ V +SA
Sbjct: 747 VVRVAAGAHHSLALTAQSQVFSWGSNSSGQLGHMESPSTV---PRLAKLSEGIRVWDVSA 803
Query: 91 GGWHS 95
G H+
Sbjct: 804 GERHT 808
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ACG H LAL+ + V++WG+G QLG ++ +P+++ L+G V+Q++
Sbjct: 335 VLELACGEKHTLALSVQREVWAWGSGC--QLGL-NAAVFPVWKPQKVEHLAGRYVLQVAC 391
Query: 91 GGWHSAA 97
G HS A
Sbjct: 392 GASHSLA 398
>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
Length = 624
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 9/144 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+A G H L++ G +FS+G G+ G+LG+ + N PR I L G +V ++AG
Sbjct: 196 VAAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFN--PRPISTLVGKHIVSVAAGLM 253
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HSAA G LY WGWN GQ+G L V P +++ + + +V V CG H
Sbjct: 254 HSAAVDSQGALYTWGWNRYGQLG----LGTVKKHTLP---NKNKELERFNIVKVVCGKNH 306
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TL L + ++ G+N QL +G
Sbjct: 307 TLVLDVNGHVYSFGFNVCGQLGIG 330
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +A G H A+ +G +++WG GQLG + + P + + L +V++
Sbjct: 245 IVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGT--VKKHTLPNKNKELERFNIVKVVC 302
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD-SQNIKVVDVAC 149
G H+ +G +Y++G+N GQ+G+ D + P+ + D D QN +++D+A
Sbjct: 303 GKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSI--KPNRI----DLDLKQNDEIIDIAA 356
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G H L L ++ G+ L +G
Sbjct: 357 GYYHVLLLTKKGCVYSFGYISDGALGLG 384
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 50/145 (34%)
Query: 20 PSRMDHFLDLV----VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG------------- 62
P+R+D LDL + DIA G+ H L LT++G V+S+G S G LG
Sbjct: 338 PNRID--LDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKL 395
Query: 63 -----------------------YPS------SGTDANMEPREIRALSGLG--VVQISAG 91
Y S + +A + P+ + + +G V+I+AG
Sbjct: 396 MPFSHFNHEFNDSIDSYKEIYGEYNSDSENDINNNNAKLPPKVVELHNEIGDVAVKIAAG 455
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVG 116
GWHSA T G LY +G + ++G
Sbjct: 456 GWHSAIITSSGRLYTFGLGDNFRLG 480
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P++ + + CG +H L L G V+S+G GQLG S ++
Sbjct: 285 LPNKNKELERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLD 344
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
++ I+AG +H T+ G +Y++G+ + G +G+ D+V H P
Sbjct: 345 LKQNDEIIDIAAGYYHVLLLTKKGCVYSFGYISDGALGLG---DVVGHQSRP 393
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 18/97 (18%)
Query: 102 GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-------------VA 148
G LY+WG+N GQ ++ + ++ + + ED D N ++ +A
Sbjct: 85 GQLYSWGYNFYGQCALDNNHNHNNNNNNKQTVDEDDDDSNFNIIKLPTLIKQGLIVSMIA 144
Query: 149 CGSRHTLALCDDNSL---WGCGWNEYNQLSMGCGVSQ 182
CG H LA+ +++ WGC N + QL +G V++
Sbjct: 145 CGDSHALAVLPNDATVLSWGC--NRWGQLGLGDQVNR 179
>gi|348686412|gb|EGZ26227.1| hypothetical protein PHYSODRAFT_486876 [Phytophthora sojae]
Length = 289
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG +H LALT G V +WG + Q S+G D P + + + +VQ++AGG
Sbjct: 83 VACGSNHVLALTDSGRVVAWGWNASAQAAV-SAGEDVVRVPTVVEFPTPVQIVQVAAGGM 141
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A G ++AWG N GQ+G+ +++ H P ++ S + I+V D+A G H
Sbjct: 142 HSLALDSSGGVWAWGCNEFGQLGINSEVE-TQHSPRRVALSAE-----IRVRDIAAGWAH 195
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+ + ++ GW YNQL G ++V
Sbjct: 196 SALVSTSGEVFTFGWGLYNQLGHGSTQNEV 225
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 2 CDHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQL 61
C+ + + H P R+ ++ V DIA G+ H ++ G VF++G G QL
Sbjct: 157 CNEFGQLGINSEVETQHSPRRVALSAEIRVRDIAAGWAHSALVSTSGEVFTFGWGLYNQL 216
Query: 62 GYPSSGTDANMEPREIRALSGLG--VVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
G+ S T +EP + AL G+ VQ++ G WH+AA T G LY WGW GQ+
Sbjct: 217 GHGS--TQNEVEPVVVDALQGVDSEAVQVACGNWHTAALTASGDLYTWGWGKDGQL 270
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
V +P+ ++ + + +A G H LAL G V++WG GQLG +S + PR
Sbjct: 118 VVRVPTVVEFPTPVQIVQVAAGGMHSLALDSSGGVWAWGCNEFGQLGI-NSEVETQHSPR 176
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMS 132
+ + + V I+AG HSA + G ++ +GW Q+G + +++ VV D
Sbjct: 177 RVALSAEIRVRDIAAGWAHSALVSTSGEVFTFGWGLYNQLGHGSTQNEVEPVVVDAL--- 233
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ DS+ ++ VACG+ HT AL L+ GW + QL
Sbjct: 234 --QGVDSEAVQ---VACGNWHTAALTASGDLYTWGWGKDGQL 270
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 20/131 (15%)
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-----VHDPHPMSWSEDFDSQNI 142
++ G H A T G + AWGWN Q V D+V V P P +
Sbjct: 83 VACGSNHVLALTDSGRVVAWGWNASAQAAVSAGEDVVRVPTVVEFPTP-----------V 131
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVK 202
++V VA G H+LAL +W G NE+ QL + V R+++ ++ V+
Sbjct: 132 QIVQVAAGGMHSLALDSSGGVWAWGCNEFGQLGINSEVETQHSPRRVALSAEIR----VR 187
Query: 203 LFAEHWNSARL 213
A W + L
Sbjct: 188 DIAAGWAHSAL 198
>gi|302808359|ref|XP_002985874.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
gi|300146381|gb|EFJ13051.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
Length = 394
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 32/183 (17%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G +K +S +P R+ + VT IA G H LAL Q G V++WGN GQLG +
Sbjct: 186 GDIKQIS----VPVRVQGLEN--VTMIAVGAFHNLALVQHGEVWAWGNNEYGQLG--TGD 237
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG---------VE 118
T P ++ L+GL +V I+AGGWHS A T DG +Y WG G++G +
Sbjct: 238 TQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKMLP 297
Query: 119 GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
K+ L+ +P VV V+CG H++A ++ G ++ +L
Sbjct: 298 QKVHLLAGEP---------------VVQVSCGGTHSVAATISGRMFSFGRGDHGRLGYSG 342
Query: 179 GVS 181
V+
Sbjct: 343 AVT 345
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 83/206 (40%), Gaps = 52/206 (25%)
Query: 23 MDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG 82
+D D V + G + LA+ ++G +F+WG RG LG+P T P +++AL+
Sbjct: 32 VDALRDHNVVSVVAGSRNSLAICEDGRLFTWGWNQRGTLGHPPE-TKTESTPSQVKALAN 90
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-------------------- 122
+ +VQ + GGWH A ++G YAWG N GQ E +
Sbjct: 91 VKIVQAAIGGWHCLAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQR 150
Query: 123 ------------------LVVHDPHPMSWSEDFDSQNIKVVDV-------------ACGS 151
++ + H +W + + +IK + V A G+
Sbjct: 151 CAPRLCVRQLTAGGTHSVVLTEEGHVWTWGQPWPPGDIKQISVPVRVQGLENVTMIAVGA 210
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMG 177
H LAL +W G NEY QL G
Sbjct: 211 FHNLALVQHGEVWAWGNNEYGQLGTG 236
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P + LV+ DIA G H +ALT +G V+ WG G G+LG+ + M
Sbjct: 238 TQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGF-GDDKSSKML 296
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+++ L+G VVQ+S GG HS A T G ++++G + G++G G V HP+
Sbjct: 297 PQKVHLLAGEPVVQVSCGGTHSVAATISGRMFSFGRGDHGRLGYSG----AVTTGHPVEV 352
Query: 134 S---EDFDSQNIKVVD------------VACGSRHTLAL 157
+ NI D VACG RH LA+
Sbjct: 353 PVSLHHYSRHNIVSEDEANGSTGWVVKLVACGGRHALAV 391
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 22/131 (16%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPRE----IRALSGLGVVQISAGGWHSAARTQDGFLY 105
V +WG G GQLG N++ ++ + AL VV + AG +S A +DG L+
Sbjct: 7 VLAWGAGEDGQLGL------GNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLF 60
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ---NIKVVDVACGSRHTLALCDDNS 162
WGWN G +G H P + S + N+K+V A G H LA+ ++
Sbjct: 61 TWGWNQRGTLG---------HPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGR 111
Query: 163 LWGCGWNEYNQ 173
+ G NEY Q
Sbjct: 112 TYAWGGNEYGQ 122
>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
Length = 1229
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
L GP M P + + L V +ACG +H ALT G V++WG GQLG
Sbjct: 854 LGQGP-TMSRHSLPSPISLLNCFKLEVLYVACGKNHTTALTNNG-VYAWGCSKYGQLGL- 910
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
+ PR I +L+ V+ +S G +H+ A T+ G ++AWGW GQ+G+ G +D
Sbjct: 911 -GDVYESPYPRLITSLANENVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGL-GNID-- 966
Query: 125 VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D Q IK D+A G H+L L D ++ G + QL G
Sbjct: 967 --DQRLPVCVNHLKDQVIK--DIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTG 1015
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++H D V+ DIA G H L L+ +G +FS+G+G GQLG + T + P I+
Sbjct: 970 LPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLG--TGNTTKSSVPVLIQ 1027
Query: 79 ALSGLGVV-------QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
+S ++ IS G HSA T G +Y WG + GQ+G G ++ P
Sbjct: 1028 GISEKIILIATGYFHSISCGCHHSALLTVSGGVYTWGRSLDGQLGNGGHKEVTA----PT 1083
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLA 156
+E+ K ++CG T A
Sbjct: 1084 QINEN----TFKADCISCGCEFTAA 1104
Score = 43.5 bits (101), Expect = 0.070, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+CG H LT G V++WG GQLG + G P +I + IS G
Sbjct: 1044 ISCGCHHSALLTVSGGVYTWGRSLDGQLG--NGGHKEVTAPTQINE-NTFKADCISCGCE 1100
Query: 94 HSAAR-TQDGFLYAWGWNNGGQVGV 117
+AA+ Q G ++ WG N+ GQV V
Sbjct: 1101 FTAAQEKQTGKIFCWGSNSVGQVRV 1125
>gi|345857538|ref|ZP_08809972.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
gi|344329366|gb|EGW40710.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
Length = 732
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
L GP +L+ P+ + +A G + LA+ +G V++WG+ S GQLG
Sbjct: 27 LLGGPTPVLASTDARPAAAS-------SQLAAGANFGLAVDAQGNVWAWGDNSEGQLGQG 79
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
+ T+ P +++ L+ V+ +SAGG H+ A DG ++AWG N Q+GV+
Sbjct: 80 VADTNPVATPIQVKDLTN--VISVSAGGVHALALKADGTVWAWGNNETDQLGVD------ 131
Query: 125 VHDPHPMSWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
P++ + QNI V +A G +LAL D +W G NEY Q ++
Sbjct: 132 --QASPIAIPRQVEGLQNI--VAIAAGLEFSLALSSDGKVWAWGANEYKQ------INYF 181
Query: 184 SVMTRLSVPEHVKNCP-IVKLFA 205
S +++ P+ V N +VK+ A
Sbjct: 182 SDAIKIATPQIVNNLSGVVKIAA 204
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 15/158 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ ++V IA G + LAL+ +G V++WG Q+ Y S P+ +
Sbjct: 138 IPRQVEGLQNIVA--IAAGLEFSLALSSDGKVWAWGANEYKQINYFSDAIKI-ATPQIVN 194
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN--GGQVGVEGKLDLVVHDPHPMSWSED 136
LSG VV+I+AG A DG ++ WG G +G++ + + S+
Sbjct: 195 NLSG--VVKIAAGSAWCLALKNDGTVWTWGAQKVPMGNDDQDGEVTNITNLTQINGISD- 251
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V+ V+ G H+LAL D ++WG G NE QL
Sbjct: 252 -------VISVSAGYSHSLALKGDGTVWGWGSNELLQL 282
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ G+ H LAL +G V+ WG+ QLG S P +I L V +SA
Sbjct: 252 VISVSAGYSHSLALKGDGTVWGWGSNELLQLG--SHDQQWFDSPVQISPLK--NVTTVSA 307
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G + + A T DG ++ G N GQ+G K D + +P+ S + +I G
Sbjct: 308 GAYLTMALTNDGTVWTLGGNIYGQLGNGIKADSLPITAYPVKASNITQATSIS---AGYG 364
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
AL S+WG G N QL G
Sbjct: 365 FALGRAL---GSVWGWGDNSKGQLGAG 388
>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 445
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T IACG H LALT+EG V SWG+G GQLG +S P EI AL+ +V I+
Sbjct: 316 ITQIACGGYHSLALTKEGKVLSWGHGGHGQLG--NSSLRNQKIPTEIEALADKKIVFIAC 373
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG SAA T G L+ WG Q+GV G ++ +E+ + Q KV+ V+ G
Sbjct: 374 GGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDERQPHKVISVSIG 433
Query: 151 SRHTLAL 157
+ H L L
Sbjct: 434 ASHALCL 440
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS++ L + V ++CG +ALT+EG +++WG S +LG + EP
Sbjct: 251 LSVPSKVKA-LTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDN--LGGWEPLP 307
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ +L + + QI+ GG+HS A T++G + +WG GQ+G + + +E
Sbjct: 308 VPSLDSVRITQIACGGYHSLALTKEGKVLSWGHGGHGQLGNSSLRNQKIP-------TEI 360
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLW 164
+ K+V +ACG + A+ D LW
Sbjct: 361 EALADKKIVFIACGGSSSAAITDGGELW 388
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 3/159 (1%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ F + + IA G H +ALT +G VF+WG G G LG+ + + PR +
Sbjct: 142 VPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRE--LVPRCVD 199
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+ I+ G H+AA T+ G LY WG G + ++ +S
Sbjct: 200 GSWDCKISAIATSGTHTAAITESGELYMWGREE-GDGRLGLGPGRGPNEGGGLSVPSKVK 258
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + V V+CG T+AL + LW G N +L G
Sbjct: 259 ALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG 297
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 15/162 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME----- 73
+P +D D ++ IA H A+T+ G ++ WG G E
Sbjct: 194 VPRCVDGSWDCKISAIATSGTHTAAITESGELYMWGR-EEGDGRLGLGPGRGPNEGGGLS 252
Query: 74 -PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P +++AL+ + V +S GG+ + A T++G L+ WG N+ ++G L P P
Sbjct: 253 VPSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPLPVP-- 309
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
DS +++ +ACG H+LAL + + G + QL
Sbjct: 310 ---SLDS--VRITQIACGGYHSLALTKEGKVLSWGHGGHGQL 346
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 72/185 (38%), Gaps = 22/185 (11%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT------DAN 71
P R+D I+CG H LT +G ++ WG G G+LG+ + +
Sbjct: 90 QTPGRIDAESSSFPIGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPL 148
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
E IR I+ GG HS A T G ++ WG+ G +G + +V
Sbjct: 149 FEEHSIRC--------IALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRCVDG 200
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
SW + K+ +A HT A+ + L+ G E + + LSV
Sbjct: 201 SW-------DCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSV 253
Query: 192 PEHVK 196
P VK
Sbjct: 254 PSKVK 258
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 36/186 (19%)
Query: 50 VFSWGNGSRGQLG--------YPSSGTDANME----------PREIRALSGLGVVQISAG 91
+FSWG G+ GQLG YPS + + P I A S + IS G
Sbjct: 50 LFSWGRGASGQLGGGIEEIRMYPSPVANLLLRSDQSFSLAQTPGRIDAESSSFPIGISCG 109
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
+HS T DG L+ WG +GG++G + + V + +P+ F+ +I+ +A G
Sbjct: 110 LFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPL-----FEEHSIRC--IALGG 161
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHW 208
H++AL ++ G+ + L V TR VP V +C I +
Sbjct: 162 LHSVALTHQGDVFTWGYGGFGALGH-------KVYTRELVPRCVDGSWDCKISAIATSGT 214
Query: 209 NSARLS 214
++A ++
Sbjct: 215 HTAAIT 220
>gi|402581334|gb|EJW75282.1| hypothetical protein WUBG_13810 [Wuchereria bancrofti]
Length = 294
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 24/161 (14%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG H ++L G VF WG S G++ + P E+
Sbjct: 32 PKRVPSLPETV--QVACGASHTVSLNGGGRVFIWGQQSDGRIRH---------SPAEVEI 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+ ++QISAG + A T G L+AWG N GQ+G D++ P P
Sbjct: 81 FVSIPIIQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTNKDVINPCPVP--------- 131
Query: 140 QNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
NI VV V CG H++AL + ++ CG + + QL GCG
Sbjct: 132 -NINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQL--GCG 169
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 11/170 (6%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ H P+ ++ F+ + + I+ G +ALT G +F+WG GQLG ++ N P
Sbjct: 70 RIRHSPAEVEIFVSIPIIQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTNKDVIN--P 127
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ ++ VV + G HS A T +G +++ G ++ GQ+G G+ + + + +
Sbjct: 128 CPVPNIN--SVVAVECGDSHSIALTHEGRVFSCGSDSFGQLGC-GQPNRSQNCMRGI--T 182
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
E S V +ACG HT+ + + + G N QL G +Q++
Sbjct: 183 EMLGSH---VTRIACGRCHTIVVA-NGKMHTFGLNSNGQLGHGNTRNQIT 228
>gi|402217324|gb|EJT97405.1| RCC1/BLIP-II [Dacryopinax sp. DJM-731 SS1]
Length = 470
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+Q P+ ++ F +ACG DH LALT +G V+ WGNG + QLG +E
Sbjct: 174 AQQQFTPAPIEDFRKEKFISLACGTDHVLALTTDGRVWVWGNGQQAQLGR------KIIE 227
Query: 74 PREIRALSG-----LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVV 125
R+ AL VV + +G +HS A G ++AWG N+ Q GV +G + ++
Sbjct: 228 RRKTNALRPEKLALKKVVAVGSGSYHSFAIDVKGRVFAWGLNSMKQTGVAAEDGGSEDII 287
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P + KV+ ++ G HTL L D ++ CG ++ +L +G
Sbjct: 288 TAPTEVRALHPDQLNGEKVIQISGGEHHTLFLVSDGRVYACGRSDGFELGIG 339
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 40 HCLALTQEGIVFSWG---NGSRGQLGYPSSGTDA----------NMEPREIRAL--SGLG 84
H L + + G ++SWG N S G+L DA +P +++L G
Sbjct: 73 HTLVIDEMGRIWSWGVNDNASLGRLTANVPIPDAPGEFFQTEVLETQPMLVQSLVDEGFR 132
Query: 85 VVQISAGGWHSAARTQDGFLYAWG--WNNGGQVGVEGKLDLVVHD--PHPMSWSEDFDSQ 140
V ++AG S A DG L WG ++ G +G +G+L P P+ EDF +
Sbjct: 133 AVTVAAGDSISVALDVDGQLRCWGSFRSSDGLLGFDGRLGSAQQQFTPAPI---EDFRKE 189
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
K + +ACG+ H LAL D +W G + QL
Sbjct: 190 --KFISLACGTDHVLALTTDGRVWVWGNGQQAQL 221
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 7/158 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ +D + V + G H LT G VF+WG+ QLG + + PR +R
Sbjct: 85 PALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRG 144
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ VVQ++ G H+ T G +Y WG NN GQ+G+ K ++P +S
Sbjct: 145 LADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTP--QNEPQWVSCIS---- 198
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +V VA G+ H L L +L+ G N + QL +G
Sbjct: 199 -GLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVG 235
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + F ++ V IACG H L + ++G V S GN GQLG+ P I
Sbjct: 34 LPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPCK----RPALID 89
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSEDF 137
+L V+Q S+G HS T G ++ WG N Q+G G++D P + D
Sbjct: 90 SLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLG-RGQVDSASTSIPRMVRGLADH 148
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
KVV VACGS HT+ L ++ G N + QL + Q
Sbjct: 149 -----KVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQ 188
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 25/207 (12%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQ 87
L + +A G DH L LT G +F+WG S GQLG G D + P ++ L G+
Sbjct: 200 LPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGV---GDDQDRGAPTLVKTLRNQGICA 256
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A T+DG ++ +G GQ+G + ++ P + F+ V +
Sbjct: 257 LACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELL--PRKV-----FELMGSSVTQI 309
Query: 148 ACGSRHTLALCDDNS---LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLF 204
ACG +H++A + ++G G N QL G V+++S P VK P V
Sbjct: 310 ACGRKHSIAYVPSSGRVYVFGLGGN--GQLGTGSTVNRMS-------PAMVKG-PFVAFG 359
Query: 205 AEHWNSARLSVPEHAKDSSIVK-LFAG 230
AE + + +H + +V+ L+AG
Sbjct: 360 AEVVDKGAIHFSQHGQPHMVVRHLYAG 386
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V WG+ + GQLG + PREIR+ + VV I+ G H+ +DG + + G
Sbjct: 11 VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGN 70
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSRHTLALCDDNSLWGCGW 168
N+ GQ+G E P DS + V+ + G++H+ L D ++ G
Sbjct: 71 NDYGQLGHE----------KPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGS 120
Query: 169 NEYNQLSMGCGVSQVSVMTRL 189
NE NQL G S + + R+
Sbjct: 121 NEDNQLGRGQVDSASTSIPRM 141
>gi|408500687|ref|YP_006864606.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465511|gb|AFU71040.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 497
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 95/232 (40%), Gaps = 33/232 (14%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALS----GL 83
T +A G H LA+ +GIV+SWG GQLG GT + PR++ +L+ GL
Sbjct: 232 FTYTQVAAGGYHVLAVGSDGIVYSWGYNDHGQLG---DGTKTSRPSPRQVTSLTGSSQGL 288
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS---- 139
ISAG HS A Q+G AWGWN GQ+G D P P S
Sbjct: 289 QAAWISAGVHHSLAVDQNGAACAWGWNTDGQLGDGNTSD----QPMPTRVSPPVGQGKAG 344
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
+ G H+LA+ D + + G N Y+QL G T+ S P V P
Sbjct: 345 SGFAAAHASAGRNHSLAIGQDGNAYAWGDNTYSQLGNGG-------TTQSSTPALVAFNP 397
Query: 200 IVKLFAEHWNSARLSVPEHAKDSSIVKLFAGH----------WNSGILVQSQ 241
++ + ++ + + D S+ H W G +VQ Q
Sbjct: 398 VLLITGVSFDQTTVDTLQQNSDGSVTLTTPAHNPGQADVNVDWTLGGIVQPQ 449
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 41 CLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR----ALSGLGVVQISAGGWHSA 96
+ + +G ++WG+ GQL ++ + P ++ +G Q++AGG+H
Sbjct: 186 SMGVASDGNAYAWGSNQHGQLSQGTADSTTQKTPIKVPLPDGVAAGFTYTQVAAGGYHVL 245
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS-WSEDFDSQNIKVVDVACGSRHTL 155
A DG +Y+WG+N+ GQ+G K P P S SQ ++ ++ G H+L
Sbjct: 246 AVGSDGIVYSWGYNDHGQLGDGTK----TSRPSPRQVTSLTGSSQGLQAAWISAGVHHSL 301
Query: 156 ALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
A+ + + GWN QL G S + TR+S P
Sbjct: 302 AVDQNGAACAWGWNTDGQLGDGN-TSDQPMPTRVSPP 337
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++CG++H +T +G +F+WGN + GQLG+ + P + +L ++ +S GG
Sbjct: 1199 VSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGE 1258
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS-EDFDSQNIKVVDVACGSR 152
H+ + +Y+WG GQ+G G V PH + E+F Q K+ +A G
Sbjct: 1259 HTVVIDRSFHIYSWGNGKYGQLG-HG-----VSTPHNLPKRIEEFAGQ--KISSIATGYW 1310
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
HTL L L+ G NE+ QL + + + TR++ +
Sbjct: 1311 HTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTAD 1351
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R++ + ++ G +H + + + ++SWGNG GQLG+ S T N+ P+ I
Sbjct: 1239 PMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVS-TPHNL-PKRIEE 1296
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE---D 136
+G + I+ G WH+ G L+A+G N GQ+G+ DL H P P +
Sbjct: 1297 FAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLN---DLKHHLPIPTRVNTADIH 1353
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V + CG H++ ++ G N QL G
Sbjct: 1354 HAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHG 1394
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--------- 63
+S ++P R++ F ++ IA G+ H L L G +F++G+ GQLG
Sbjct: 1284 VSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPI 1343
Query: 64 PSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
P+ A++ A V I G HS RT G +Y++G N GQ+G G +
Sbjct: 1344 PTRVNTADIH----HAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQLG-HGSTES 1398
Query: 124 VVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+ P + + +NIK + CG HT+ D +S++ C W + + +G G ++
Sbjct: 1399 CRY-PKLI---QGLKGKNIK--RITCGPYHTVVTTDLDSVY-C-WGQGEHMCLGTGSNKN 1450
Query: 184 SVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVP 216
++ +L E N + ++ +++A L+ P
Sbjct: 1451 ELVPKLV--ELFVNKRVERVVCGLYHTATLTQP 1481
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQE-------GIVFSWGNGSRGQLGY---PSSGT 68
+P ++ F++ V + CG H LTQ G V+ G+ G+LG P S +
Sbjct: 1453 VPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPS 1512
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P I +++ VV +++G +A T +G LY WG GQ+G D + P
Sbjct: 1513 LDKAYPAIIPSINSANVVDLASGAEFNALITSNGALYMWGAGTHGQIGNGKNQDTWI--P 1570
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLA 156
+S S + +QN +VD + GS TL+
Sbjct: 1571 TRVSLSSE-KNQNQFIVDES-GSTITLS 1596
>gi|328783019|ref|XP_395630.4| PREDICTED: hypothetical protein LOC412167, partial [Apis mellifera]
Length = 854
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ I G H LALT +G VF+WG+ GQLG P N +P ++ V +I+
Sbjct: 210 IVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVN-KPTKVHIPEP--VKRINT 266
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HS T++G +Y G + G++G++ + P M V+ VACG
Sbjct: 267 GYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIM-PKQMQLPN-------PVIYVACG 318
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
HT+ L ++N+L+ G N QL +G V+++ LS
Sbjct: 319 GHHTMFLTENNNLYCTGSNSSGQLGLGTNVTELHTPKLLS 358
Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I G+ H + LT+ G+V+ G G+LG + + M P++++ + V+ ++
Sbjct: 261 VKRINTGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIM-PKQMQLPNP--VIYVAC 317
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ T++ LY G N+ GQ+G+ G +H P +S +N ++ ++CG
Sbjct: 318 GGHHTMFLTENNNLYCTGSNSSGQLGL-GTNVTELHTPKLLSQGA---LKNERISRISCG 373
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
HT L + L+ CG + +L +
Sbjct: 374 ESHTAILTESGKLYTCGDGRHGKLGL 399
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H + Q G +F +G+ GQLG + +P ++ L V ++
Sbjct: 101 VISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHIS--KPSCVKVLKPEKVTHVAC 158
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQ-------VGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
G H+ T ++A G + GQ +G ++++D P K
Sbjct: 159 GRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSTSTPVLIYDSGPTG---------SK 209
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
+V + GS H+LAL D +++ G N QL + V+ T++ +PE VK
Sbjct: 210 IVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVK 262
Score = 36.6 bits (83), Expect = 9.9, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
++ I+CG H LT+ G +++ G+G G+LG + + + E ++ L + IS
Sbjct: 367 ISRISCGESHTAILTESGKLYTCGDGRHGKLGLEENENNVH-ELTFVQRYKQLFISNISC 425
Query: 91 GGWHS 95
GG H+
Sbjct: 426 GGCHT 430
>gi|196008365|ref|XP_002114048.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
gi|190583067|gb|EDV23138.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
Length = 429
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIR 78
P+ + L++ +ACG H +ALT+ G +++WG LG +S T +A P +
Sbjct: 62 PTAVKKLLEVEFIQVACGGVHTVALTKAGEIYTWGCNDECALGRDTSDTSEAEYLPGLVD 121
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWG--WNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L + ++Q+SAG H+AA DG ++ WG W+N G +G L+L P P+ D
Sbjct: 122 GLDNVKIIQVSAGDNHTAALADDGRVFCWGNFWDNRGSIG----LNLAGKQPRPIVMLGD 177
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWNEYNQL 174
N V+ + G+ H AL + + WGCG E QL
Sbjct: 178 ---PNDPVIKIGSGNNHVAALTANGLIFTWGCG--EQGQL 212
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 16/176 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGN--GSRGQLGYPSSGTDAN 71
S+ ++P +D ++ + ++ G +H AL +G VF WGN +RG +G +G
Sbjct: 111 SEAEYLPGLVDGLDNVKIIQVSAGDNHTAALADDGRVFCWGNFWDNRGSIGLNLAGK--- 167
Query: 72 MEPREIRALSGLG--VVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--------VEGKL 121
+PR I L V++I +G H AA T +G ++ WG GQ+G + +
Sbjct: 168 -QPRPIVMLGDPNDPVIKIGSGNNHVAALTANGLIFTWGCGEQGQLGRVAERFCSRDTRQ 226
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
L ++ ++I+ D+ G + A+ ++ CG N Y Q+ G
Sbjct: 227 GLKRFLQPAVARVTQRSKKDIRFSDIFVGPYNLFAVNAAGEVFACGLNNYGQIGNG 282
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 21/169 (12%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQD 101
LA + GIV G G GQLG + + P ++ L + +Q++ GG H+ A T+
Sbjct: 31 LASDEAGIVLVLGQGELGQLGLGEEILERS-RPTAVKKLLEVEFIQVACGGVHTVALTKA 89
Query: 102 GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-----QNIKVVDVACGSRHTLA 156
G +Y WG N+ +G D S +E N+K++ V+ G HT A
Sbjct: 90 GEIYTWGCNDECALG---------RDTSDTSEAEYLPGLVDGLDNVKIIQVSAGDNHTAA 140
Query: 157 LCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
L DD + WG W+ + + Q + L P N P++K+
Sbjct: 141 LADDGRVFCWGNFWDNRGSIGLNLAGKQPRPIVMLGDP----NDPVIKI 185
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS---------GTDANMEPR----EI 77
V I G +H ALT G++F+WG G +GQLG + G ++P
Sbjct: 182 VIKIGSGNNHVAALTANGLIFTWGCGEQGQLGRVAERFCSRDTRQGLKRFLQPAVARVTQ 241
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
R+ + I G ++ A G ++A G NN GQ+G G + + + S S
Sbjct: 242 RSKKDIRFSDIFVGPYNLFAVNAAGEVFACGLNNYGQIG-NGNITSLYYLAKIDSLSALN 300
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
D + + + +A G HTL L + ++ G +Y +L +G V + S T +
Sbjct: 301 DGNDERQILIASGEHHTLILARNGRVYSIGRGDYGRLGLGPDVKECSHPTEIET 354
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ ++ + + + CG A++ G V+SWG G+ QLG SS D + P ++
Sbjct: 349 PTEIETLANSDIKAVTCGLAVSFAVSNSGDVYSWGMGTNLQLG--SSTDDDILTPTLVKT 406
Query: 80 LSGLGVVQISAGGWHSA 96
SAGG H+A
Sbjct: 407 KESYNFFAASAGGQHTA 423
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 12/126 (9%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN--MEPREIRALSGLGVVQISAG 91
IA G H L L + G V+S G G G+LG G D P EI L+ + ++ G
Sbjct: 310 IASGEHHTLILARNGRVYSIGRGDYGRLGL---GPDVKECSHPTEIETLANSDIKAVTCG 366
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
S A + G +Y+WG Q+G D++ P + E ++ + G
Sbjct: 367 LAVSFAVSNSGDVYSWGMGTNLQLGSSTDDDILT--PTLVKTKESYN-----FFAASAGG 419
Query: 152 RHTLAL 157
+HT L
Sbjct: 420 QHTAIL 425
>gi|348688712|gb|EGZ28526.1| hypothetical protein PHYSODRAFT_260366 [Phytophthora sojae]
Length = 409
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ +D D +V DIA G+ H LA+T+ G VF+WG G RGQLG+ + DA P+E+ A
Sbjct: 181 PTHVDIDGDEIV-DIAAGYQHGLAVTKNGTVFTWGKGERGQLGFGTGNADA---PQELIA 236
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G + + AG HS A ++DG LY WG + +E D + P + S+
Sbjct: 237 LKGKKIAHVGAGFNHSCAVSEDGELYLWGKLLNPKGKMESNGDQIT--PRLVRTSD---- 290
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCG 167
V C HT + D+ +W G
Sbjct: 291 ---AVKLFKCSQFHTTFITADDEIWLAG 315
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 71/177 (40%), Gaps = 23/177 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I C LT+ G +F+ G GQ G +++P + G +V I+A
Sbjct: 139 VKKIVCSTALTFLLTESGKLFTLGANGYGQCGVGEE--SVSVQPPTHVDIDGDEIVDIAA 196
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H A T++G ++ WG GQ+G G D + E + K+ V
Sbjct: 197 GYQHGLAVTKNGTVFTWGKGERGQLGFGTGNAD---------APQELIALKGKKIAHVGA 247
Query: 150 GSRHTLALCDDNS--LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLF 204
G H+ A+ +D LWG N + M Q++ P V+ VKLF
Sbjct: 248 GFNHSCAVSEDGELYLWGKLLNPKGK--MESNGDQIT-------PRLVRTSDAVKLF 295
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 26/163 (15%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
IV S+G+G G LG +G+ N + P + + +GL V +IS G H+ T DG Y +
Sbjct: 32 IVLSYGDGFLGALG---TGSYENVLTPTPLPSTTGLPVKEISVGWAHAGFVTNDGDAYIY 88
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS---------------QNIKVVDVACGSR 152
G + + V ++ P + W +F + KV + C +
Sbjct: 89 GRTHSFR-DVIRSTNMQRVLPKLVWWMNNFTRARGVDTLVPALLELPEGEKVKKIVCSTA 147
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
T L + L+ G N Y Q CGV + SV + P HV
Sbjct: 148 LTFLLTESGKLFTLGANGYGQ----CGVGEESV--SVQPPTHV 184
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ +D + V IACG H + LT +G VF+WG G G+LG+ +G PR ++
Sbjct: 24 PTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNG--WKYVPRMTQS 81
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G V+Q++ G +H+AA T +G LY WG GG G G D H P +
Sbjct: 82 LAGQIVLQVTCGSYHTAAVTGNGDLYTWG---GGMYGKLGHGDEAGHAT-PKRVEALVGA 137
Query: 140 QNIKVVDVACGSRHTLALCDDNSLW 164
V +ACGSRHT + +L+
Sbjct: 138 ---TVAQIACGSRHTAIVTASGALY 159
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R++ + V IACG H +T G +++WG+ G G+ + + PR + +
Sbjct: 128 PKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYL-PRLLES 186
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
++ V QISA G+H+A T G L+ WG G++G + + H P + +
Sbjct: 187 MAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERN--CHSPTIVDY-----M 239
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
K V+CG HT + +D L+ G E+ QL
Sbjct: 240 VGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQL 274
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P +V + CG H A+T G +++WG G G+LG+ A P+ +
Sbjct: 74 YVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHAT--PKRV 131
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G V QI+ G H+A T G LY WG G G G+ + + P + E
Sbjct: 132 EALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAG-HGETEGHQYLPRLL---ESM 187
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
++ + + ACG HT + D L+ G ++ +L
Sbjct: 188 AAKRVAQIS-ACGF-HTAIVTDAGELFTWGEGKFGRL 222
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
VF+WG G GQLG T EP + AL G+GV QI+ G H+ T DG ++ WG
Sbjct: 2 VFTWGRGEDGQLGLGD--TSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGR 59
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK---VVDVACGSRHTLALCDDNSLWGC 166
+ G++G H + + +Q++ V+ V CGS HT A+ + L+
Sbjct: 60 GDDGRLG---------HGDNGWKYVPRM-TQSLAGQIVLQVTCGSYHTAAVTGNGDLYTW 109
Query: 167 GWNEYNQLSMG 177
G Y +L G
Sbjct: 110 GGGMYGKLGHG 120
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 18 HMPSRMDHFLDLVVTDI-ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
++P ++ V I ACGF H +T G +F+WG G G+LG+ S P
Sbjct: 179 YLPRLLESMAAKRVAQISACGF-HTAIVTDAGELFTWGEGKFGRLGHMSE--RNCHSPTI 235
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ + G Q+S GG+H+A ++DG LY +G GQ+G +++ + ++ E
Sbjct: 236 VDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMT-----PTFVEA 290
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
D + V + CG H++AL ++ G ++ +L G G +++VP+ V+
Sbjct: 291 LD--GMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNG-------RKVAVPQAVE 341
>gi|383851572|ref|XP_003701306.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Megachile rotundata]
Length = 864
Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +A G H LAL +G VF+WG+ GQLG P N +P ++ V QISA
Sbjct: 218 ILQLAAGSHHSLALISDGGVFAWGSNLEGQLGLPDVSGLVN-KPTKVHIPEP--VKQISA 274
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HSA T+ G +Y G + G++G++ + P M V VACG
Sbjct: 275 GYYHSAFLTESGLVYICGESESGKLGIDVNFSTQI-TPKQMQLPS-------PAVHVACG 326
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
HT+ L ++ +++ G N QL +G V+++ LS
Sbjct: 327 GHHTVVLAENGNIYCTGSNSNGQLGLGTNVTELHTPKLLS 366
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+ G+ H LT+ G+V+ G G+LG + + + P++++ S V ++
Sbjct: 269 VKQISAGYYHSAFLTESGLVYICGESESGKLGIDVNFS-TQITPKQMQLPSP--AVHVAC 325
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ ++G +Y G N+ GQ+G+ G +H P +S QN + ++CG
Sbjct: 326 GGHHTVVLAENGNIYCTGSNSNGQLGL-GTNVTELHTPKLLSRGM---LQNETISRISCG 381
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
HT + + L+ CG + +L +
Sbjct: 382 ESHTAIVTESGKLFTCGDGRHGKLGL 407
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I CG +H + Q G +F +G+ GQLG + +P ++ L V ++
Sbjct: 109 VVSITCGDEHSAVICQSGRLFVFGSNDWGQLGLGHRNHIS--KPSCVKVLKPEKVTHVAC 166
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+ T ++A G + GQ+G G + P+ D K++ +A G
Sbjct: 167 GRAHTLISTGAQKIFACGSDQEGQLG-RGTSAIGDSSSSPV-LVYDAGLAGSKILQLAAG 224
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNS 210
S H+LAL D ++ G N QL + V+ T++ +PE P+ ++ A +++S
Sbjct: 225 SHHSLALISDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPE-----PVKQISAGYYHS 279
Query: 211 ARLS 214
A L+
Sbjct: 280 AFLT 283
>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 684
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 17/143 (11%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQISAGG 92
+A G+ H LA+ +G V++WG+ + GQLG GT +N EP +++ LSG VV +SAG
Sbjct: 339 VAAGYAHSLAVRSDGTVWAWGSNASGQLG---EGTTSNRSEPVQVQGLSG--VVAVSAGA 393
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGS 151
S A DG ++AWG N GQ+G D +V Q + VV V G+
Sbjct: 394 SSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLV----------PVQVQGLSGVVAVVAGT 443
Query: 152 RHTLALCDDNSLWGCGWNEYNQL 174
+LA+ +D ++WG G+N Y QL
Sbjct: 444 SFSLAVRNDGTVWGWGYNGYGQL 466
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V A G H LAL +G V++WG GQLG S G+ A EP +++ LSG V + A
Sbjct: 38 VVAAAAGSIHSLALRNDGTVWAWGYNGYGQLGNGSLGSRA--EPVQVQGLSGG--VSVDA 93
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HS A DG ++AWG N GQ+G EG + SE VV V G
Sbjct: 94 GHYHSLAVRDDGTVWAWGDNPNGQLG-EGTTTRRLVPVQVQGLSE--------VVAVTAG 144
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
S H+LAL D ++W G N QL G +++ + L + E V
Sbjct: 145 SSHSLALRSDGTVWAWGANASGQLGEGTTTNRLVPVPVLGLSEVVA 190
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ G H LA+ +G V++WG+ GQLG + T + P +++ LS VV ++AG
Sbjct: 91 VDAGHYHSLAVRDDGTVWAWGDNPNGQLGEGT--TTRRLVPVQVQGLSE--VVAVTAGSS 146
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A DG ++AWG N GQ+G + +V P + SE VV V GS H
Sbjct: 147 HSLALRSDGTVWAWGANASGQLGEGTTTNRLVPVP-VLGLSE--------VVAVEAGSSH 197
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGC 178
+LAL D ++W G N QL G
Sbjct: 198 SLALRSDGTVWAWGANASGQLGDGT 222
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G H LAL +G V++WG + GQLG + T + P ++ + GVV + A
Sbjct: 188 VVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGT--TTKRLVPVQVLS----GVVAMEA 241
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP---MSWSEDFDSQNIKVVDV 147
G +S A DG ++AWG+N GQ+G D V P + SE VV V
Sbjct: 242 GSGYSLAVRNDGTVWAWGYNFSGQLG----DDTVTSRSTPVQVLGLSE--------VVAV 289
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
A GS +LAL D ++W G N+Y Q G
Sbjct: 290 AAGSSLSLALRSDGTVWAWGSNDYGQRGEGT 320
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ G LA+ +G V++WG+ + GQLG + T + P +++ LSG VV + A
Sbjct: 386 VVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGT--TTDRLVPVQVQGLSG--VVAVVA 441
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G S A DG ++ WG+N GQ+G L ++V P ++ VV VA G
Sbjct: 442 GTSFSLAVRNDGTVWGWGYNGYGQLGTFTSLFVLV--PVQVTGLS-------GVVAVAAG 492
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGC 178
+ H+LA+ D ++W G N+ QL G
Sbjct: 493 NLHSLAVRSDGTVWALGRNDNGQLGDGS 520
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 73/147 (49%), Gaps = 12/147 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +A G H LA+ +G V++WG S GQLG S P ++ LSG G V S+
Sbjct: 536 VVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGS--WFQRSAPVQVTGLSGRGSVAASS 593
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
+S A DG ++AWG+N GQ+G +G P + Q VV V G
Sbjct: 594 D--YSMAVRYDGTVWAWGFNLYGQLG-DGTTSSNQLVPVQVQ-------QLRGVVAVEVG 643
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
S H+LAL D ++W G+N + QL G
Sbjct: 644 SSHSLALRSDGTVWTWGYNSFGQLGNG 670
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 74/150 (49%), Gaps = 17/150 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
V +A G LAL +G V++WG+ GQ G GT +N P + R LSG V ++
Sbjct: 286 VVAVAAGSSLSLALRSDGTVWAWGSNDYGQRG---EGTTSNRAFPVQARGLSGG--VAVA 340
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVA 148
AG HS A DG ++AWG N GQ+G EG + SE Q + VV V+
Sbjct: 341 AGYAHSLAVRSDGTVWAWGSNASGQLG-EGTTS---------NRSEPVQVQGLSGVVAVS 390
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
G+ +LA+ D ++W G N QL G
Sbjct: 391 AGASSSLAIRSDGTVWAWGSNASGQLGDGT 420
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 72/145 (49%), Gaps = 17/145 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQIS 89
V + G H LAL +G V++WG + GQLG GT N + P + LS VV +
Sbjct: 138 VVAVTAGSSHSLALRSDGTVWAWGANASGQLG---EGTTTNRLVPVPVLGLSE--VVAVE 192
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG HS A DG ++AWG N GQ+G +G + +S VV +
Sbjct: 193 AGSSHSLALRSDGTVWAWGANASGQLG-DGTTTKRLVPVQVLS----------GVVAMEA 241
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQL 174
GS ++LA+ +D ++W G+N QL
Sbjct: 242 GSGYSLAVRNDGTVWAWGYNFSGQL 266
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 71/152 (46%), Gaps = 21/152 (13%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G LA+ +G V+ WG GQLG +S + P ++ LSG VV ++A
Sbjct: 436 VVAVVAGTSFSLAVRNDGTVWGWGYNGYGQLGTFTS--LFVLVPVQVTGLSG--VVAVAA 491
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK----VVD 146
G HS A DG ++A G N+ GQ+G SW+ + VV
Sbjct: 492 GNLHSLAVRSDGTVWALGRNDNGQLG-------------DGSWTNRSAPVQVTGLSGVVS 538
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
VA G H+LA+ D S+W G+N + QL G
Sbjct: 539 VAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGS 570
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 71/156 (45%), Gaps = 22/156 (14%)
Query: 47 EGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYA 106
+G V++ GN GQLG + D P ++ LS VV +AG HS A DG ++A
Sbjct: 4 DGTVWAAGNNGSGQLGDGTR--DNRSTPVQVLGLSE--VVAAAAGSIHSLALRNDGTVWA 59
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSRHTLALCDDNSLWG 165
WG+N GQ+G G L S +E Q + V V G H+LA+ DD ++W
Sbjct: 60 WGYNGYGQLG-NGSLG---------SRAEPVQVQGLSGGVSVDAGHYHSLAVRDDGTVWA 109
Query: 166 CGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
G N QL G TR VP V+ V
Sbjct: 110 WGDNPNGQLGEGT-------TTRRLVPVQVQGLSEV 138
>gi|299116182|emb|CBN74531.1| similar to retinitis pigmentosa GTPase regulator [Ectocarpus
siliculosus]
Length = 983
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 9/166 (5%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-P 74
V P+ + + L ++ CG H +AL + G V SWG G GQLG+ G +A+ P
Sbjct: 81 VHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGH---GDNASYRHP 137
Query: 75 REIRALS----GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
R +R L G VVQ++ GG+HSA T G ++ WG+N GQ G G D V +P
Sbjct: 138 RLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCG-NGSKDNTVPEPSL 196
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ S +V V CG H+ + +L+ G + +L +
Sbjct: 197 VDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGL 242
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L+ + +P + F D + A G H +AL+++ VFSWG G+ GQ G+ G+
Sbjct: 242 LQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGH---GSL 298
Query: 70 ANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
+M PR + +L + V Q+ G W S A T DG+ YAWG +GG G+ L V DP
Sbjct: 299 LHMRMPRRVSSLQEVPVAQVVCGPWWSMAITVDGYCYAWGSADGGWTGLTRPPGLRVVDP 358
Query: 129 HPMS----WSEDFDSQN-------------IKVVDVACGSRHTLALCDDNS 162
P + ++ FDS + KV+ V CG HTL + +
Sbjct: 359 GPSADRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVAKRRA 409
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 22 RMD-HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI--- 77
R+D L V +ACG H T G VF+WG GQ G +G+ N P
Sbjct: 142 RLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCG---NGSKDNTVPEPSLVD 198
Query: 78 --RALSGL--GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
R G V ++ G HSA T+ G LY WG + G++G++ + V P +++
Sbjct: 199 LSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQ-DAEKTVCIPQEVTF 257
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
D +V A G H +AL ++ G+ Q
Sbjct: 258 FSD-----KPLVQAAAGDFHMVALSRKREVFSWGYGAEGQ 292
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 17/145 (11%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G +H + T EG +F WG D + P + L +++ G H
Sbjct: 56 AAGANHSILRTSEGKLFRWG----------VEDGDVHPFPTGVCTQIPLPCIEVCCGRKH 105
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI--KVVDVACGSR 152
+ A + GF+ +WG GQ+G HP D Q + +VV VACG
Sbjct: 106 TVALMKGGFVMSWGTGYFGQLGHGDNASYR----HPRLLRR-LDPQRLGERVVQVACGGY 160
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H+ D ++ G+N Y Q G
Sbjct: 161 HSAVATDAGRVFTWGFNRYGQCGNG 185
>gi|428182233|gb|EKX51094.1| hypothetical protein GUITHDRAFT_150990 [Guillardia theta CCMP2712]
Length = 402
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 24/222 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + V D+A G HC AL++EG V++WG G G+LG+ G +PR+++A
Sbjct: 63 PFMLKSMQSIFVFDVAVGVSHCAALSREGHVYTWGCGDYGKLGH--GGLWDVAQPRQVQA 120
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG----VEGKLDLVVHDPHPMSWSE 135
L+ +QI+ G H+ A T + L+ WG GQ+G + L V +P E
Sbjct: 121 LNKRRCIQIACGANHTLALTDNSMLWTWGDGRYGQLGHGTWQDCGLPCKVLNP------E 174
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN---EYNQLSMGCGVSQVSVMTRLS 190
+++KV V CG T A+ +N + WG GW+ + ++ MG + + R
Sbjct: 175 SARQEHLKVRWVGCGDDFTAAITSENRMLTWGNGWHGQLGHERMVMG---GEAARRKRSD 231
Query: 191 VPEHVKNCPIVKLFAE-HWNSARLSVPE---HAKDSSIVKLF 228
V + P + L + ++AR S +A+DS + ++
Sbjct: 232 VDQFFSRVPSLSLLTQTKQDNARGSAARTRSNAEDSKMQEIL 273
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQE-GIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++ D+ V+ IACG H LA + + V+SWG G +LG+ + EP+ +
Sbjct: 306 LPQQVHLLRDVEVSKIACGSRHVLAYSADPPRVWSWGEGEGNKLGHGTCFD--QYEPKLV 363
Query: 78 RALSGLGVVQISAGGWHSAA--RTQDGFLY 105
+ L G V ++ G SA T++ +Y
Sbjct: 364 QELEGKTVSSMTCGSMWSAVFLETEEAKVY 393
>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
Length = 4191
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 96/201 (47%), Gaps = 20/201 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
+P R+ LD VV ++ G D H LAL + G+V+SWG+G G+LG+ + T E R
Sbjct: 421 LPKRI--LLDCVVKKLSSSKGSDGHTLALAETGVVYSWGDGDYGKLGHGNCATHKQPE-R 477
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
G + I AG HSAA T DG LY WG + G++G H +
Sbjct: 478 ITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHGRLG---------HGDSNARYVP 528
Query: 136 DFDSQNIKVVDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
+ +V VACGS HTL + D ++W G E+ +L G ++ + R V E
Sbjct: 529 TQVAGLAEVGSVACGSSHTLVVSKDGKTVWSFGSGEHGKL----GTGELGKVYRPQVVEA 584
Query: 195 VKNCPIVKLFAEHWNSARLSV 215
++ I K+ A W S L+
Sbjct: 585 LQGLTIQKVCAGTWFSMALTT 605
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIAC--GFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H S + V+TD+A G D H LAL + G VFSWG+G G+LG+ D
Sbjct: 3397 LHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKLGH--GNPDRQRR 3454
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL VVQ++ G HSA T DG L+ +G + G++G L V + P
Sbjct: 3455 PRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLG----LGSVANKKLP--- 3507
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMG 177
+ ++ VACG HT + D ++W G +Y +L +G
Sbjct: 3508 ERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLG 3552
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +ACG H L ++++G V+S+G+G G+LG G P+ + AL GL + ++
Sbjct: 537 VGSVACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGELG--KVYRPQVVEALQGLTIQKVC 594
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG W S A T G +Y WG G + +G D +V+ P + ED ++VD++
Sbjct: 595 AGTWFSMALTTAGEVYTWG---SGAILGKGSADAIVNLPM---YVEDL--AQYRIVDISA 646
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G H LAL D++ ++ G N Q G S ++
Sbjct: 647 GDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSPIT 681
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 16/176 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P +++ V +ACGF H +T +G +F++GNG G+LG G+ AN + P +
Sbjct: 3455 PRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGL---GSVANKKLPERVM 3511
Query: 79 ALSGLGVVQISAGGWHSAARTQDGF-LYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSED 136
AL G + Q++ G H+A + DG ++ +G + G++G+ + L+ +
Sbjct: 3512 ALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQKVETVC---- 3567
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNE--YNQLSMGCGVSQVSVMTRLS 190
N+ + V CG+ TL L D ++ CG + ++ L V + +MT LS
Sbjct: 3568 ----NLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRERAVFKPQIMTSLS 3619
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
+ ++P ++ + DI+ G +HCLALT E VF+WG S GQ G + + P
Sbjct: 626 IVNLPMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSPIT-RPL 684
Query: 76 EIRALSGLGVVQISAGGWHSAA 97
++ L G+ + QISAG HS A
Sbjct: 685 KVIGLEGVSIRQISAGTSHSMA 706
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P M D + D+A G +H L LT G V WG GQLG P P I
Sbjct: 3612 PQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPH--VSLVRHPEIITE 3669
Query: 80 LSGLGVVQISAGGWHSAA 97
LS G+ QIS G HSAA
Sbjct: 3670 LSDKGIRQISTGRTHSAA 3687
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ L + + G +ALT G V++WG+G+ LG S+ N+ P +
Sbjct: 577 YRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAI--LGKGSADAIVNL-PMYV 633
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
L+ +V ISAG H A T + ++AWG N+ GQ G
Sbjct: 634 EDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCG 672
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G L L +P +++ F + I CG + + +G V + G GS G+LG +S
Sbjct: 3338 GQLAELGYSASVPVQVESFS--IARKIICGQNCTFVIQSDGTVLACGEGSYGRLGQGNSD 3395
Query: 68 TDANMEPREIRALSGLGVVQISA---GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
++ I +L G + ++ HS A + G +++WG + G++G
Sbjct: 3396 DLHSLSV--ISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKLG-------- 3445
Query: 125 VH-DPHPMSWSEDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
H +P ++ Q +VV VACG +H+ + D L+ G ++ +L +G
Sbjct: 3446 -HGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLG 3499
>gi|322699843|gb|EFY91602.1| Ran exchange factor Prp20/Pim1, putative [Metarhizium acridum CQMa
102]
Length = 539
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 23/192 (11%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
+ L P Q +P R + IA G H A+ ++ V++WG S G+ G
Sbjct: 311 NQLGRQPFGRYQQETLLP-RQVRVCTRPIKYIASGEYHSFAVDRKDNVWAWGLNSFGEAG 369
Query: 63 YP--SSGTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-- 117
Y + G +A + P +IR L G GVV ++ G HS A T+DG +Y WG +GGQ+G+
Sbjct: 370 YAKEAGGDEAILPYPMKIRDLCGKGVVSMAGGTHHSGAVTEDGKVYMWGRLDGGQLGIDF 429
Query: 118 -EGKLDLVVHDPHPMSWSEDFDSQNI-----------KVVDVACGSRHTLALCDDNSLWG 165
+ +LD D H + ++++ I VVDVACG+ HT+ + D+ +
Sbjct: 430 SQSQLD----DEH-LVRRDEYNKPRICLRPTVVPEIGNVVDVACGTDHTIFINDEGVGYA 484
Query: 166 CGWNEYNQLSMG 177
G+ QL +G
Sbjct: 485 TGFGSVGQLGLG 496
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT--DANMEPREIRALSGLGVVQI 88
V IACG +H LAL + G V+ WG+ + QLG G + PR++R + + I
Sbjct: 283 VIQIACGANHALALDKSGQVWGWGSYEQNQLGRQPFGRYQQETLLPRQVRVCT-RPIKYI 341
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++G +HS A + ++AWG N+ G+ G E D + P+PM D VV
Sbjct: 342 ASGEYHSFAVDRKDNVWAWGLNSFGEAGYAKEAGGDEAIL-PYPMKIR---DLCGKGVVS 397
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+A G+ H+ A+ +D ++ G + QL + SQ+
Sbjct: 398 MAGGTHHSGAVTEDGKVYMWGRLDGGQLGIDFSQSQL 434
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 93/243 (38%), Gaps = 45/243 (18%)
Query: 2 CDHLASGPLKMLSQVFHMPSRMD--HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRG 59
C L GP + + V +D + +ACG H +ALT + + +WG G
Sbjct: 117 CGELGLGPKRTAALVPKFNPALDPNDASKYHIVQLACGGMHTIALTADNKILTWGVNDEG 176
Query: 60 QLGY---------------PSSGTDANMEPREIRAL--------SGLGVVQISAGGWHSA 96
LG S D + P E G Q++AG S
Sbjct: 177 ALGRDTAWEGGLKDMDAESDSGDEDGELNPYECTPTEVPAKNFPKGTVFTQVAAGDSCSF 236
Query: 97 ARTQDGFLYAWGW---NNGGQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
TQ G +Y WG N G + + GK+ + DP + E+ V+ +ACG
Sbjct: 237 VLTQTGTVYGWGSFRDNKGDRRFTKSQNGKVVEIQKDPILIPELEN-------VIQIACG 289
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL-SMGCGVSQVSVMTRLSVPEHVKNC--PIVKLFAEH 207
+ H LAL +WG G E NQL G Q + +P V+ C PI + +
Sbjct: 290 ANHALALDKSGQVWGWGSYEQNQLGRQPFGRYQQETL----LPRQVRVCTRPIKYIASGE 345
Query: 208 WNS 210
++S
Sbjct: 346 YHS 348
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA--LSGLGVVQI 88
V D+ACG DH + + EG+ ++ G GS GQLG + DAN R IR + G +V
Sbjct: 463 VVDVACGTDHTIFINDEGVGYATGFGSVGQLGL-GNEDDANTAQR-IRGKDIKGRKLVGA 520
Query: 89 SAGGWHS 95
+AGG S
Sbjct: 521 AAGGQFS 527
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 18/153 (11%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGN--GSRGQLGYPSS--GTDANMEPREIRALSGLGV 85
V T +A G LTQ G V+ WG+ ++G + S G ++ I V
Sbjct: 224 VFTQVAAGDSCSFVLTQTGTVYGWGSFRDNKGDRRFTKSQNGKVVEIQKDPILIPELENV 283
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+QI+ G H+ A + G ++ WG Q+G P E + ++V
Sbjct: 284 IQIACGANHALALDKSGQVWGWGSYEQNQLG---------RQPFGRYQQETLLPRQVRVC 334
Query: 146 D-----VACGSRHTLALCDDNSLWGCGWNEYNQ 173
+A G H+ A+ +++W G N + +
Sbjct: 335 TRPIKYIASGEYHSFAVDRKDNVWAWGLNSFGE 367
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 43 ALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL-----SGLGVVQISAGGWHSAA 97
A T+ VF++G+G G+LG T A + P+ AL S +VQ++ GG H+ A
Sbjct: 102 APTEPIAVFAFGSGECGELGLGPKRT-AALVPKFNPALDPNDASKYHIVQLACGGMHTIA 160
Query: 98 RTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ 140
T D + WG N+ G +G + + + D S S D D +
Sbjct: 161 LTADNKILTWGVNDEGALGRDTAWEGGLKDMDAESDSGDEDGE 203
>gi|357631307|gb|EHJ78885.1| hypothetical protein KGM_12126 [Danaus plexippus]
Length = 1418
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 81/156 (51%), Gaps = 17/156 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALS---GL 83
V DIACG H L LT+ GI ++ G+ S GQLG + + DA + E+ +S
Sbjct: 731 VVDIACGRHHTLLLTENGI-YAAGDNSYGQLGVGCRWGGAVGDAAIASGELLHVSYHWTA 789
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL-VVHDPHPMSWSEDFDSQNI 142
+V +SAG +HSAA G LY WGW GV G+L L V D + Q
Sbjct: 790 PLVVVSAGHYHSAAVDVGGRLYTWGW------GVHGQLCLGSVDDQYSPRLVTKL--QGR 841
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
KV++V CGS HT+ L + +W CG + QL+ GC
Sbjct: 842 KVLNVGCGSCHTVVLMKNGEVWSCGAGVFGQLAAGC 877
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC------GVSQVSVMTRLSVPEHVK 196
KVVD+ACG HTL L +N ++ G N Y QL +GC G + ++ L V H
Sbjct: 730 KVVDIACGRHHTLLLT-ENGIYAAGDNSYGQLGVGCRWGGAVGDAAIASGELLHVSYHW- 787
Query: 197 NCPIVKLFAEHWNSARLSV 215
P+V + A H++SA + V
Sbjct: 788 TAPLVVVSAGHYHSAAVDV 806
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 20/144 (13%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGT--------DANMEPREIRALSGLG-VVQISAGG 92
LALT + ++ WG+ S QL S+ D ++ R + G +V+I+AG
Sbjct: 972 LALTNKNQLWCWGS-SPQQLRAASAKRNEEDNDDGDRHLALRLVDTSHVRGRIVRIAAGW 1030
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGV----EGKLDLVVHDPH-----PMSWSEDFDSQNIK 143
HS G LY WG N GQ+G + K+ + V P+ P S + +N K
Sbjct: 1031 HHSCIIDNTGTLYTWGLNFDGQLGTGDRKQVKIPVEVKIPNESQTEPRSPDKIDPKENTK 1090
Query: 144 VVDVACGSRHTLALCDDNSLWGCG 167
+ VACG T+ + D+ ++ G
Sbjct: 1091 CL-VACGGDFTIFIDDNGKIYSTG 1113
>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 76/148 (51%), Gaps = 16/148 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG +PS+ T P+ + L+G+ +
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTT-----PQIVEHLAGVPLA 193
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QISAG HS A + G +Y+WG N GQ+G+ S E D+Q KV
Sbjct: 194 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGH-----TESKDSPSLIEALDNQ--KVEF 246
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ACG H+ L D L+ G ++ QL
Sbjct: 247 LACGGSHSALLTQDGLLFTFGAGKHGQL 274
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 14/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ + V +ACG H LTQ+G++F++G G GQLG+ S T + P +
Sbjct: 233 PSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNS--TQNELRPCLVAE 290
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V QI+ G WH+ A D G ++++G GQ+G G LD ++ P +S SE+
Sbjct: 291 LVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELK 350
Query: 139 ----SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
+ +++ +A G++ L LW N Y L
Sbjct: 351 LESHTSEKELIMIAGGNQSIL-------LWIKKENSYVNLK 384
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG T++ P I A
Sbjct: 181 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGL--GHTESKDSPSLIEA 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG HSA TQDG L+ +G GQ+G ++ P +E +
Sbjct: 239 LDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNS----TQNELRPCLVAELVGN 294
Query: 140 QNIKVVDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMGCGVSQ-VSVMTRLSVPEHVK 196
+V +ACG HTLA D ++ G + QL G + Q + + ++S E +K
Sbjct: 295 ---RVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELK 350
>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 76/148 (51%), Gaps = 16/148 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG +PS+ T P+ + L+G+ +
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTT-----PQIVEHLAGVPLA 193
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QISAG HS A + G +Y+WG N GQ+G+ S E D+Q KV
Sbjct: 194 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGH-----TESKDSPSLIEALDNQ--KVEF 246
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ACG H+ L D L+ G ++ QL
Sbjct: 247 LACGGSHSALLTQDGLLFTFGAGKHGQL 274
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 14/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ + V +ACG H LTQ+G++F++G G GQLG+ S T + P +
Sbjct: 233 PSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNS--TQNELRPCLVAE 290
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V QI+ G WH+ A D G ++++G GQ+G G LD ++ P +S SE+
Sbjct: 291 LVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELK 350
Query: 139 ----SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
+ +++ +A G++ L LW N Y L
Sbjct: 351 LESHTSEKELIMIAGGNQSIL-------LWIKKENSYVNLK 384
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG T++ P I A
Sbjct: 181 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGL--GHTESKDSPSLIEA 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG HSA TQDG L+ +G GQ+G ++ P +E +
Sbjct: 239 LDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNS----TQNELRPCLVAELVGN 294
Query: 140 QNIKVVDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMGCGVSQ-VSVMTRLSVPEHVK 196
+V +ACG HTLA D ++ G + QL G + Q + + ++S E +K
Sbjct: 295 ---RVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELK 350
>gi|380029875|ref|XP_003698590.1| PREDICTED: uncharacterized protein LOC100869963 [Apis florea]
Length = 1858
Score = 77.4 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 52/148 (35%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + V+ D G H +ALT +G VF+WG G GQLG+ TD M P + +
Sbjct: 913 PELITSLAQEVIIDAVAGQYHSVALTSDGRVFTWGWGVHGQLGH--GNTDKKMTPTLVTS 970
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G+ + I+AG H+ A + +G +YA+G N GQ+GV + V P +S SE
Sbjct: 971 LLGIVIRFITAGHAHTLALSTEGIIYAFGCNIFGQLGVGNNIKSSV--PIKVSLSE---- 1024
Query: 140 QNIKVVDVACGSRHTLALCDDNSL--WG 165
+++ +A G H LA+ N L WG
Sbjct: 1025 ---RIILIATGYFHNLAVSCTNKLYIWG 1049
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
+++ V ++CG H LA+T G V++WG+ GQLG + P I +L+ ++
Sbjct: 869 MEIEVLSVSCGHCHTLAVTNNG-VYAWGSSQFGQLGLGKILQCST--PELITSLAQEVII 925
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
AG +HS A T DG ++ WGW GQ+G G D M+ + I +
Sbjct: 926 DAVAGQYHSVALTSDGRVFTWGWGVHGQLG-HGNTD------KKMTPTLVTSLLGIVIRF 978
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
+ G HTLAL + ++ G N + QL +G + SV ++S+ E +
Sbjct: 979 ITAGHAHTLALSTEGIIYAFGCNIFGQLGVGNNIKS-SVPIKVSLSERI 1026
Score = 41.6 bits (96), Expect = 0.31, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
++QIS G H+A T+DG LY WG N GQ+G + ++ + P P+ ++
Sbjct: 1157 IIQISTGCHHNALVTKDGSLYTWGRNLDGQIGNGSRREVPI--PTPLCYN 1204
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLG 62
+ CG+D+ +A+ G V +WGN SR QLG
Sbjct: 1267 VYCGYDYTIAIQPGGTVLAWGNNSRAQLG 1295
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V+ +ACG +H LA T+ G VFSWG G G LG S P + L G+ V +
Sbjct: 170 VSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDS--QDRYTPTRVVGLDGVTVTSVVC 227
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HSA T +G ++ +GW+ GQ+ G D V H + Q+ +V VA G
Sbjct: 228 GWRHSAVVTDEGRVFTFGWSKYGQL---GHGDHVDHTRPCLV----AGLQHCRVSTVAGG 280
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
RHT+A + +L+ GWN++ QL +G
Sbjct: 281 WRHTMAADSEGNLYAWGWNKFGQLGLG 307
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + F V +ACG H L +TQ +G ++++G GQLG T+ + P+ +
Sbjct: 105 VPRPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGH--TNDCLSPQLV 162
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G V ++ G HS A T+ G +++WGW G +G D D + +
Sbjct: 163 TALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLG-----DGDSQDRYTPTRVVGL 217
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D + V V CG RH+ + D+ ++ GW++Y QL G
Sbjct: 218 D--GVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHG 255
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 24 DHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
DH + V ++CG H +AL G+V SWG G GQLG+ + D P I AL+
Sbjct: 5 DHQEEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQA--DQCTSPTCIAALTDA 62
Query: 84 GVVQISAGGWHS-AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
GV + G ++ A + G +Y+WGW + G++G D+ V P P+++ F +
Sbjct: 63 GVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFV--PRPIAF---FSGR-- 115
Query: 143 KVVDVACGSRHTLALCD-DNSLWGCGWNEYNQLSMG 177
V VACG HTL + D +L+ G N+ QL +G
Sbjct: 116 PVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLG 151
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 17/174 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
SQ + P+R+ + VT + CG+ H +T EG VF++G GQLG+ +++
Sbjct: 205 SQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGD-----HVD 259
Query: 74 PREIRALSGLGVVQIS--AGGW-HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
++GL ++S AGGW H+ A +G LYAWGWN GQ+G+ D P P
Sbjct: 260 HTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAA--PTP 317
Query: 131 MS-------WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ E + +V +ACG RHT+A+ + ++ G QL G
Sbjct: 318 VAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHG 371
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY----------PSSGTDANMEPREIRAL 80
V+ +A G+ H +A EG +++WG GQLG P +G E A
Sbjct: 274 VSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAA 333
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
+ V ++ G H+ A T+ G +Y+WG GQ+G + DL
Sbjct: 334 TPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQDL 376
>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 2154
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 25/164 (15%)
Query: 29 LVVTDIAC--GFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV 85
VVT +A G D H LA+T+ G VFSWG+G G+LG+ +S D PR+I AL G V
Sbjct: 1883 FVVTQLATSVGSDGHTLAVTESGEVFSWGDGDYGKLGHGNS--DRQRRPRQIEALQGEEV 1940
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD------LVVHDPHPMSWSEDFDS 139
+Q+S G HSA T DG L+ +G + G++G+ + +V + H + +
Sbjct: 1941 IQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGY------ 1994
Query: 140 QNIKVVDVACGSRHTLAL-CDDNSLWGCGWNEYNQLSMGCGVSQ 182
VACG HTL + D ++W G ++ +L G V +
Sbjct: 1995 -------VACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGK 2031
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H+P+++ V+ +ACG +AL++ G VF+WG +G P + +N +P+E+
Sbjct: 2032 HLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTWGQ--ERLIGQPDTRGGSNCQPQEV 2089
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+LSG + + G H+ T DG ++ WG N+ GQ+G+ G + V +P
Sbjct: 2090 ASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGL-GHTNSPVREPQ 2140
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+R+ + +ACG +H L ++ +G V+++G+G G+LG T P +
Sbjct: 1979 KVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLG--QGNTVGKHLPTK 2036
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN-GGQVGVEGKLDLVVHDPHPMSWSE 135
I+AL G + +++ G S A ++ G ++ WG GQ G + + +S
Sbjct: 2037 IKALQGHVIKKVACGTQFSVALSKYGKVFTWGQERLIGQPDTRGGSNCQPQEVASLS--- 2093
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ DV CG+ HTL L D +WG G N QL +G
Sbjct: 2094 -----GYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLG 2130
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA--- 90
I CG + + G V + G GS G+LG +S D I ++ G V Q++
Sbjct: 1836 IVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNS--DDLHSLTAISSIQGFVVTQLATSVG 1893
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
H+ A T+ G +++WG + G++G G D P Q +V+ ++CG
Sbjct: 1894 SDGHTLAVTESGEVFSWGDGDYGKLG-HGNSD---RQRRPRQIEA---LQGEEVIQLSCG 1946
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+H+ + D L+ G +Y +L +G ++ V TR+
Sbjct: 1947 FKHSAVVTADGKLFTFGNGDYGRLGLGTTTNK-KVPTRV 1984
>gi|449448608|ref|XP_004142058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
Length = 485
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 11 KMLSQVFHMPSRM--DHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
K S V + S+ L V IACG H + +T G + ++G G GQ G T
Sbjct: 286 KDRSSVIYQASKAAAGKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQCG--QGNT 343
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
+ + P + +LS V ISAG WH+ T +G +YA+G N GQ+G D P
Sbjct: 344 NDLLRPTCVSSLSSTQVESISAGLWHTVCITAEGLVYAFGGNQFGQLGT--GTDQGETIP 401
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR 188
+ + + + K V+CG+RH + L DD L+ GWN+Y QL +G + + ++ ++
Sbjct: 402 RLLD-APILEGKCAK--RVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDR-NIPSK 457
Query: 189 LSVPEHVKNCPIVKLFAEHWNSARLSVPEHAK 220
+S + C + W++ L+ E +K
Sbjct: 458 VS----IDGCLPRNIVCGWWHTLMLAEAEPSK 485
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG---------------- 62
+P ++ + + +A G H LAL+ G V+ WG+G GQLG
Sbjct: 219 LPCLVNFGPGVKIAAVAAGGRHTLALSDMGQVWGWGHGGEGQLGLGTRVKMVSSPHIIPC 278
Query: 63 --YPSSGTD-ANMEPREIRALSG--LG--VVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
P+S D +++ + +A +G LG V I+ GG HS T G L +GW GQ
Sbjct: 279 IELPASAKDRSSVIYQASKAAAGKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQC 338
Query: 116 GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
G DL+ P S +Q V ++ G HT+ + + ++ G N++ QL
Sbjct: 339 GQGNTNDLL----RPTCVSSLSSTQ---VESISAGLWHTVCITAEGLVYAFGGNQFGQL- 390
Query: 176 MGCGVSQVSVMTRL 189
G G Q + RL
Sbjct: 391 -GTGTDQGETIPRL 403
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 24/148 (16%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G+ + ++AGG H+ A + G ++ WG GQ+G+ ++ + V PH + E S
Sbjct: 228 GVKIAAVAAGGRHTLALSDMGQVWGWGHGGEGQLGLGTRVKM-VSSPHIIPCIELPASAK 286
Query: 142 IK-------------------VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
+ V +ACG RH++ + D +L GW Y Q CG
Sbjct: 287 DRSSVIYQASKAAAGKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQ----CGQGN 342
Query: 183 VSVMTRLSVPEHVKNCPIVKLFAEHWNS 210
+ + R + + + + + A W++
Sbjct: 343 TNDLLRPTCVSSLSSTQVESISAGLWHT 370
>gi|367021210|ref|XP_003659890.1| hypothetical protein MYCTH_2297426 [Myceliophthora thermophila ATCC
42464]
gi|347007157|gb|AEO54645.1| hypothetical protein MYCTH_2297426 [Myceliophthora thermophila ATCC
42464]
Length = 520
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG--YPSSGTDANMEPREIRALSGLG-VVQ 87
+ I CG +H +ALT +G V++WG G+ GQLG + S D N + + ++GL +V+
Sbjct: 263 IIKICCGSNHVMALTADGFVYTWGRGTDGQLGRRFSSRVVDWNKQGLIPQKVAGLKDIVE 322
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGV-------EGKLDLVVHDPHPMSWSEDFDSQ 140
I +G HS A + G L+ WG+NN GQ+GV E + D + P P S + +
Sbjct: 323 IGSGSNHSFAVDRAGRLFGWGFNNAGQIGVVDDAGEYESEYDFAITVPVP-SLVQSLEGL 381
Query: 141 NIKVVDVACGSRHTLALCDDNS--LWGCGWNEYNQLSMGCGVSQVSVM------TRLSVP 192
++ + G+ H++A+ +D WG ++ L + Q V+ + LSVP
Sbjct: 382 P-RIKQITGGNFHSIAVTEDGRCLTWGRLYSFATGLKIDALPPQFVVLDSRGKPSFLSVP 440
Query: 193 EHVKNCPIVKLFAEHWNSARLSVPEH 218
V P + A +S ++V E
Sbjct: 441 TAVPGFPASFVAAASEHSLAVTVDEK 466
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + T +A + ALT G V+ WG R + G S ++ + +++
Sbjct: 207 DTIFTQVAATDNATFALTSTGRVYGWGT-FRSEDGKLSFTPTVRVQSLPVLIHQVENIIK 265
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD-----PHPMSWSEDFDSQNI 142
I G H A T DGF+Y WG GQ+G +V + P ++ +D
Sbjct: 266 ICCGSNHVMALTADGFVYTWGRGTDGQLGRRFSSRVVDWNKQGLIPQKVAGLKD------ 319
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+V++ GS H+ A+ L+G G+N Q+ +
Sbjct: 320 -IVEIGSGSNHSFAVDRAGRLFGWGFNNAGQIGV 352
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 50 VFSWGNGSRGQLGY-PSSGTDANMEPREIRALSG-LGVVQISAGGWHSAARTQDGFLYAW 107
++ G S G+LG PS + +PR LSG +GVVQ+S G H A T D + W
Sbjct: 92 IYVLGANSGGELGLGPSVKSGNATKPRLNPYLSGPVGVVQVSLGAMHGVALTLDNKILTW 151
Query: 108 GWNNGGQVG 116
G N+ G +G
Sbjct: 152 GVNDHGALG 160
>gi|449519078|ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 472
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 11 KMLSQVFHMPSRM--DHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
K S V + S+ L V IACG H + +T G + ++G G GQ G T
Sbjct: 273 KDRSSVIYQASKAAAGKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQCG--QGNT 330
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
+ + P + +LS V ISAG WH+ T +G +YA+G N GQ+G D P
Sbjct: 331 NDLLRPTCVSSLSSTQVESISAGLWHTVCITAEGLVYAFGGNQFGQLGT--GTDQGETIP 388
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR 188
+ + + + K V+CG+RH + L DD L+ GWN+Y QL +G + + ++ ++
Sbjct: 389 RLLD-APILEGKCAK--RVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDR-NIPSK 444
Query: 189 LSVPEHVKNCPIVKLFAEHWNSARLSVPEHAK 220
+S + C + W++ L+ E +K
Sbjct: 445 VS----IDGCLPRNIVCGWWHTLMLAEAEPSK 472
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG---------------- 62
+P ++ + + +A G H LAL+ G V+ WG+G GQLG
Sbjct: 206 LPCLVNFGPGVKIAAVAAGGRHTLALSDMGQVWGWGHGGEGQLGLGTRVKMVSSPHIIPC 265
Query: 63 --YPSSGTD-ANMEPREIRALSG--LG--VVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
P+S D +++ + +A +G LG V I+ GG HS T G L +GW GQ
Sbjct: 266 IELPASAKDRSSVIYQASKAAAGKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQC 325
Query: 116 GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
G DL+ P S +Q V ++ G HT+ + + ++ G N++ QL
Sbjct: 326 GQGNTNDLL----RPTCVSSLSSTQ---VESISAGLWHTVCITAEGLVYAFGGNQFGQL- 377
Query: 176 MGCGVSQVSVMTRL 189
G G Q + RL
Sbjct: 378 -GTGTDQGETIPRL 390
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 24/148 (16%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G+ + ++AGG H+ A + G ++ WG GQ+G+ ++ + V PH + E S
Sbjct: 215 GVKIAAVAAGGRHTLALSDMGQVWGWGHGGEGQLGLGTRVKM-VSSPHIIPCIELPASAK 273
Query: 142 IK-------------------VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
+ V +ACG RH++ + D +L GW Y Q CG
Sbjct: 274 DRSSVIYQASKAAAGKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQ----CGQGN 329
Query: 183 VSVMTRLSVPEHVKNCPIVKLFAEHWNS 210
+ + R + + + + + A W++
Sbjct: 330 TNDLLRPTCVSSLSSTQVESISAGLWHT 357
>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
Length = 228
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 2 CDHLASGPLKMLSQVFHMPSRMDHFL----DLVVTDIACGFDHCLALTQEGIVFSWGNGS 57
C LK + VF+ P + FL +L+ +ACG H LALT G V+S+G G+
Sbjct: 6 CGEFGQLGLKDAAGVFNSP--LPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGT 63
Query: 58 RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG- 116
G LG+ + T++ P + +L GLG+VQI+ G HS A T +G L++WG GQ+G
Sbjct: 64 FGALGHGT--TESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGC 121
Query: 117 --VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
VE L P P++ D + V CG+ +T+A+ D L+ G + Q
Sbjct: 122 GSVENHL-----QPVPVTALSDR-----LLTQVVCGADYTMAIDSDGQLFSWGHGHWGQT 171
Query: 175 SMG 177
G
Sbjct: 172 GHG 174
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +D L + IACG +H ALT EG +FSWG G GQLG S + +++P + A
Sbjct: 78 PVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGS--VENHLQPVPVTA 135
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LS + Q+ G ++ A DG L++WG + GQ G + +++V P + E
Sbjct: 136 LSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILV--PKLVCSLE---- 189
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
N +V + G+RH +AL ++ G NE Q+
Sbjct: 190 -NDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 26/158 (16%)
Query: 50 VFSWGNGSRGQLGYP-SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ SWG G GQLG ++G + PR +R L V+++ G H+ A T G +Y++G
Sbjct: 1 LVSWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFG 60
Query: 109 WNNGGQVG---VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
G +G E V+ D W + +V +ACG H+ AL + L+
Sbjct: 61 QGTFGALGHGTTESCSSPVIVDS---LW-------GLGIVQIACGDNHSCALTVEGQLFS 110
Query: 166 CGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
G +Y QL GCG SV H++ P+ L
Sbjct: 111 WGRGKYGQL--GCG----------SVENHLQPVPVTAL 136
>gi|408501214|ref|YP_006865133.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
gi|408466038|gb|AFU71567.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
Length = 1086
Score = 77.4 bits (189), Expect = 5e-12, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
S D L ++ G+ H LAL+ +G ++WG GQLG +SG+ + P I
Sbjct: 671 SPTDESRGLKAIQVSAGYWHSLALSNDGYAYAWGYDWYGQLGNNTSGS-SEYSPFPILVR 729
Query: 81 S---------GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH-- 129
+ GL +Q+SAG HS A +G++YAWGWN+ GQ+G + + D H
Sbjct: 730 NPDSPTDESMGLKTIQVSAGNLHSLALDSNGYVYAWGWNSYGQLG--DNTNDISEDSHSA 787
Query: 130 -------PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P + SE + +K + ++ G H++A+ D + GWN QL
Sbjct: 788 FPVRVRDPANPSE--TNMGLKAIQISAGYDHSMAVGSDGYAYAWGWNVKGQL 837
Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP--SSGTDANMEPREIR------ 78
+ L I+ G+DH +A+ +G ++WG +GQLG S N P +R
Sbjct: 803 MGLKAIQISAGYDHSMAVGSDGYAYAWGWNVKGQLGNNTISDSYSGNPVPVHVRDPANPT 862
Query: 79 -ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
GL Q+SAG WHS A DG+ Y WG+N GQ+G K D V P +
Sbjct: 863 DTSKGLKATQVSAGYWHSLAVGSDGYAYGWGYNWYGQLGNNTKTDSYVPVPVRDPANPTD 922
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ +K ++ G H++A+ + ++ G N +L G
Sbjct: 923 TNKGLKATQISSGYWHSMAVGSEGYVYAWGNNGNGRLGDG 962
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 36/191 (18%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRG--------------QLGYPSSGTDANME 73
D ++ G H LA+ +G ++WGN + G ++ P S TD +
Sbjct: 619 DFTYVQVSAGGRHSLAVGSDGYAYAWGNNNNGQLGNNTKTNSYVPVRIRDPGSPTDES-- 676
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-------GKLDLVVH 126
GL +Q+SAG WHS A + DG+ YAWG++ GQ+G ++V
Sbjct: 677 -------RGLKAIQVSAGYWHSLALSNDGYAYAWGYDWYGQLGNNTSGSSEYSPFPILVR 729
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
+P S +S +K + V+ G+ H+LAL + ++ GWN Y QL G + +S
Sbjct: 730 NPD----SPTDESMGLKTIQVSAGNLHSLALDSNGYVYAWGWNSYGQL--GDNTNDISED 783
Query: 187 TRLSVPEHVKN 197
+ + P V++
Sbjct: 784 SHSAFPVRVRD 794
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 22/148 (14%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS-----------GLGVVQISA 90
LA+ +G ++WG+ + GQLG GT N IR + VQ+SA
Sbjct: 571 LAVGSDGNAYAWGDNTYGQLG---DGTANNSRYTPIRVKTPDRKTYPDLPADFTYVQVSA 627
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD----LVVHDPHPMSWSEDFDSQNIKVVD 146
GG HS A DG+ YAWG NN GQ+G K + + + DP S +S+ +K +
Sbjct: 628 GGRHSLAVGSDGYAYAWGNNNNGQLGNNTKTNSYVPVRIRDPG----SPTDESRGLKAIQ 683
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
V+ G H+LAL +D + G++ Y QL
Sbjct: 684 VSAGYWHSLALSNDGYAYAWGYDWYGQL 711
>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
pisum]
Length = 4404
Score = 77.4 bits (189), Expect = 5e-12, Method: Composition-based stats.
Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 11/172 (6%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
L GP + P + +++ + G HCLAL+ G V++WG+G G+LG
Sbjct: 3609 LGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLG 3668
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
+ T + +P+ +++LS ++ I+ GG+HSAA ++ G LY WG G++G D +
Sbjct: 3669 NRVTHS--KPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYL 3726
Query: 125 VHDPHPMSWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL 174
P + N VV VACGS T+ + D+++W G +Y +L
Sbjct: 3727 Y--PKLVQ-----GLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKL 3771
Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 11/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + ++ V +ACG + +T + V+SWG+G G+LG+ S ++ P +I
Sbjct: 3728 PKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHNIS--ESCKLPCKI 3785
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+LSG G++QI G S A + +G LY WG + ++G G + V P P+S
Sbjct: 3786 ESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLG-HGSSEHV-RKPKPVS----- 3838
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K+V + GS H LAL DD ++ G N+ QL G
Sbjct: 3839 GLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGDG 3878
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
+S+ +P +++ + I CG +AL+ G +++WG G +LG+ SS +
Sbjct: 3775 ISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSS--EHVR 3832
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P+ + L G +VQ S G H A T DG +YAWG N+ GQ+G +G + P P++
Sbjct: 3833 KPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLG-DGTAHPIAR-PRPIA 3890
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+ ++ V+CGS H+ A + +
Sbjct: 3891 -----ALKGKRIQQVSCGSAHSFAWASEEA 3915
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 57/163 (34%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
P ++ V+ +A G H +AL+ +G V SWG+G G+LG+ G ++ P+
Sbjct: 2669 PRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGH---GDILTLDTPKL 2725
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L V I+ G HSAA T DG LY WG GQ G G D V H ++
Sbjct: 2726 IDSLLAKRVFYIACGSAHSAAITSDGELYTWG---QGQYGRLGHSDEVSQ--HTPKLVKE 2780
Query: 137 FDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
F +NI VACGSR TLAL + +++ G ++ +L G
Sbjct: 2781 FVGKNI--TQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRG 2821
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 29/171 (16%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +D L V IACG H A+T +G +++WG G G+LG+ S + P+ ++
Sbjct: 2723 PKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQYGRLGH--SDEVSQHTPKLVKE 2780
Query: 80 LSGLGVVQISAGG--WHSAARTQDGFLYAWGWNNGGQVGVEG--------KLD-LVVHDP 128
G + Q++ G + A +G +Y+WG + G++G G K++ LV H
Sbjct: 2781 FVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCTPQKVERLVGH-- 2838
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
+VV + CG++ ++AL +W G EY +L +G G
Sbjct: 2839 --------------RVVQIECGAQFSVALTATGQVWTWGKGEYYRLGLGRG 2875
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 13/174 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
H P + F+ +T +ACG LAL EG V+SWG+G G+LG G+D P+
Sbjct: 2773 HTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLG--RGGSDGCCTPQ 2830
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
++ L G VVQI G S A T G ++ WG ++G+ G+ + H P ++
Sbjct: 2831 KVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGL-GRGE---HVRRPTLVNQ 2886
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ + + +A G+ H +A+ ++ G N++ Q G G + + RL
Sbjct: 2887 ---LKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQ--QGNGTTNANQEPRL 2935
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG--LGVVQISA 90
+I G ++ EG VF G+ S G+LG P G ++ PR+I LS + V + +
Sbjct: 2630 EIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFCGKVSS--PRQIPGLSQFVIKTVAVHS 2687
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVAC 149
GG H+ A + DG + +WG G+ G G D++ D + DS K V +AC
Sbjct: 2688 GGKHAMALSLDGKVLSWG---DGEDGKLGHGDILTLDTPKL-----IDSLLAKRVFYIAC 2739
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
GS H+ A+ D L+ G +Y +L VSQ
Sbjct: 2740 GSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQ 2772
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 12 MLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDA 70
M S P D L T + G A+T G V++ G G+LG P + +
Sbjct: 3560 MDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNP 3619
Query: 71 NM-EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ P+ ++ L+ + V +++GG H A + G +YAWG + G++G+ + V H
Sbjct: 3620 YVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNR---VTHSKP 3676
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ S + ++D+ACG H+ A+ L+ G Y +L G
Sbjct: 3677 QLVQS----LSDKCIIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHG 3720
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 48/153 (31%), Positives = 67/153 (43%), Gaps = 21/153 (13%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQD 101
LA+TQ+G V+SWG G LG+ + P I A S L VV +S G AA T+D
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGH-GQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTED 563
Query: 102 GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVVDVACGS--RHTLALC 158
G LY WG ++H + E S V V+CGS +TLAL
Sbjct: 564 GKLYMWG--------------KILHSSNCCYTPELVKSISEWHVSKVSCGSSINNTLALS 609
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
+ ++ EY GC ++V+ + V
Sbjct: 610 REGYVFSF---EYRNSDRGCDDKSLNVIPSMIV 639
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 27 LDLVVTD-IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV 85
L LV D IA G HC+A++ +G V+ WG+ GQ G + T+AN EPR + + + +
Sbjct: 2887 LKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQG--NGTTNANQEPRLVTNFNNIKI 2944
Query: 86 VQISAGGWHSAA 97
++ G S A
Sbjct: 2945 NRVGCGSSQSIA 2956
Score = 42.0 bits (97), Expect = 0.24, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+V+ WG+ RGQL S +P +LS L Q+ G A T G +YA G
Sbjct: 3545 VVYVWGHNHRGQLACMDSSQVK--KPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASG 3602
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
+ G++G+ G + +P+ ++ NI V V G RH LAL ++ G
Sbjct: 3603 YTESGRLGI-GPYN--PKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGD 3659
Query: 169 NEYNQLSMGCGVSQ 182
+ +L +G V+
Sbjct: 3660 GDDGKLGLGNRVTH 3673
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
F P + F L+V ++CG D C A+T++G ++ WG ++ P
Sbjct: 533 FPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDGKLYMWGK--------ILHSSNCCYTPEL 584
Query: 77 IRALSGLGVVQISAGGW--HSAARTQDGFLYAWGWNN 111
++++S V ++S G ++ A +++G+++++ + N
Sbjct: 585 VKSISEWHVSKVSCGSSINNTLALSREGYVFSFEYRN 621
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
D + I C D + VF+WG G+ LG+ +S N P+E++ LSG V
Sbjct: 640 FDYEIVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNS-FRVN-RPKEVKFLSGKQVT 697
Query: 87 QISAGGWHSAARTQDGFLYAWG 108
+S + A T G +Y WG
Sbjct: 698 SLSLADDYILALTDTGQVYCWG 719
>gi|308812700|ref|XP_003083657.1| OJ1124_B05.9 gene product (ISS) [Ostreococcus tauri]
gi|116055538|emb|CAL58206.1| OJ1124_B05.9 gene product (ISS), partial [Ostreococcus tauri]
Length = 197
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +IA G H L T+ G V S+GNGS GQLG ++G A R I LGVV+I+A
Sbjct: 5 VVEIAAGSFHLLMRTRNGEVMSYGNGSYGQLGLGATG--AADVCRVIETFGRLGVVKIAA 62
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GGWHSAA T G LY WG G+ G G D V P D +++ + D+A G
Sbjct: 63 GGWHSAAVTAGGVLYTWGR---GEYGRLGHGDDVKDKVVPKLVELD---ESVFIADIALG 116
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNS 210
H+ A+ + ++ G +L V + + VP V P+ + W +
Sbjct: 117 GSHSCAITAEGNVLSWGRTTLGRLGR---VIRDPSSSTCGVPSRVAFPPLPN--GKRWKA 171
Query: 211 ARLS 214
++S
Sbjct: 172 LKIS 175
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 23 MDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG 82
++ F L V IA G H A+T G++++WG G G+LG+ D + P+ +
Sbjct: 49 IETFGRLGVVKIAAGGWHSAAVTAGGVLYTWGRGEYGRLGHGDDVKD-KVVPKLVELDES 107
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP--------MSWS 134
+ + I+ GG HS A T +G + +WG G+L V+ DP +++
Sbjct: 108 VFIADIALGGSHSCAITAEGNVLSWGRTT------LGRLGRVIRDPSSSTCGVPSRVAFP 161
Query: 135 EDFDSQNIKVVDVACGSRHTLALC 158
+ + K + ++CG RHTLA+C
Sbjct: 162 PLPNGKRWKALKISCGGRHTLAVC 185
>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Papio anubis]
Length = 1023
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 76/148 (51%), Gaps = 16/148 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG +PS+ T P+ + L+G+ +
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTT-----PQIVEHLAGVPLA 193
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QISAG HS A + G +Y+WG N GQ+G+ S E D+Q KV
Sbjct: 194 QISAGEAHSMALSMSGNVYSWGKNEFGQLGLGH-----TESKDSPSLIEALDNQ--KVEF 246
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ACG H+ L D L+ G ++ QL
Sbjct: 247 LACGGSHSALLTQDGLLFTFGAGKHGQL 274
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 14/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ + V +ACG H LTQ+G++F++G G GQLG+ S T + P +
Sbjct: 233 PSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNS--TQNELRPCLVAE 290
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V QI+ G WH+ A D G ++++G GQ+G G LD ++ P +S SE+
Sbjct: 291 LVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELK 350
Query: 139 ----SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
+ +++ +A G++ L LW N Y L
Sbjct: 351 LESHTSEKELIMIAGGNQSIL-------LWIKKENSYVNLK 384
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G V+SWG GQLG T++ P I A
Sbjct: 181 PQIVEHLAGVPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGL--GHTESKDSPSLIEA 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG HSA TQDG L+ +G GQ+G ++ P +E +
Sbjct: 239 LDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNS----TQNELRPCLVAELVGN 294
Query: 140 QNIKVVDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMGCGVSQ-VSVMTRLSVPEHVK 196
+V +ACG HTLA D ++ G + QL G + Q + + ++S E +K
Sbjct: 295 ---RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELK 350
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q K++ + CG H+LAL L+ G N + QL +G + T + EH+ P
Sbjct: 135 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG---RKFPSTTTPQIVEHLAGVP 191
Query: 200 IVKLFAEHWNSARLSV 215
+ ++ A +S LS+
Sbjct: 192 LAQISAGEAHSMALSM 207
>gi|359482088|ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like isoform
1 [Vitis vinifera]
Length = 514
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 7/147 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG H +T G + ++G G GQ G T + P + ALSG+ V I+A
Sbjct: 326 VKGIACGGRHSAVITDAGQLLTFGWGLHGQCGL--GNTHDQLRPACVSALSGVKVAGIAA 383
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G WH+ + +G +YA+G N GQ+G D P + S + +N + V+CG
Sbjct: 384 GLWHTLCFSAEGQVYAFGGNQFGQLGT--GADQAETLPKLLDAS---NLENKRAKIVSCG 438
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+RH++ L + ++ GWN+Y QL +G
Sbjct: 439 ARHSVVLTEGGEIFSWGWNKYGQLGLG 465
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 84/205 (40%), Gaps = 37/205 (18%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-----------------PSS-GTD--- 69
++ IA G H LAL+ G V+ WG G GQLG PS+ G D
Sbjct: 246 ISTIAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRTKLVSSPHLIPCFNPSAYGKDRPS 305
Query: 70 -----ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
+ +I + G V I+ GG HSA T G L +GW GQ G+ D +
Sbjct: 306 LVHQGSLSSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNTHDQL 365
Query: 125 VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
P S +KV +A G HTL + ++ G N++ QL G G Q
Sbjct: 366 ----RPACVSA---LSGVKVAGIAAGLWHTLCFSAEGQVYAFGGNQFGQL--GTGADQAE 416
Query: 185 VMTRLSVPEHVKN--CPIVKLFAEH 207
+ +L +++N IV A H
Sbjct: 417 TLPKLLDASNLENKRAKIVSCGARH 441
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 23/118 (19%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH------PMSWSE 135
G+ + I+AGG H+ A + G ++ WG+ GQ+G+ + L V PH P ++ +
Sbjct: 243 GVRISTIAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRTKL-VSSPHLIPCFNPSAYGK 301
Query: 136 DFDS----------QNI------KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D S ++I +V +ACG RH+ + D L GW + Q +G
Sbjct: 302 DRPSLVHQGSLSSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLG 359
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 78/196 (39%), Gaps = 26/196 (13%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGS---RGQ 60
+L SG + F +P+ + + A G+ HC++LT +G ++WG G+
Sbjct: 102 YLTSGQHGETPEPFPLPT------EAPIVKAAAGWAHCVSLTDKGEAYTWGWKECVPSGK 155
Query: 61 LGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV--E 118
+ S+G + ++L +Q G + G + + N + G +
Sbjct: 156 VLLDSTGVRFEKDSFGKQSL-----LQTEQEGPKPQSSNSTGGMLSRVDNRKAREGSIKK 210
Query: 119 GKLDLVVHDPHPMSWSEDFD----------SQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
+ +P S S+D +++ +A G RHTLAL D +WG G+
Sbjct: 211 RRTSSAKQEPESSSMSDDETFLASPCLVTLGPGVRISTIAAGGRHTLALSDMGQVWGWGY 270
Query: 169 NEYNQLSMGCGVSQVS 184
QL +G VS
Sbjct: 271 GGEGQLGLGSRTKLVS 286
>gi|348506950|ref|XP_003441020.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like
[Oreochromis niloticus]
Length = 651
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 10/168 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
MP ++D V ++ G H L T +G +F+WG+ QLG S T+ + P I
Sbjct: 184 MPKKLDFLRGKKVASLSYGSGPHVLLATDDGQLFAWGHNGYSQLGNGS--TNPGLSPVLI 241
Query: 78 RA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
A L V ++S G HS A T DG ++AWG+NN GQ+G + P+P +
Sbjct: 242 TANLQNKKVKEVSCGSHHSMALTLDGEVFAWGYNNCGQIGSGS----TANQPYPRKVTGC 297
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+N + CG ++AL D+ ++G G+N QL +G +Q++
Sbjct: 298 LQGKNAS--GITCGQTSSMALVDNGEVYGWGYNGNGQLGIGNNGNQLT 343
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V +++CG H +ALT +G VF+WG + GQ+G SG+ AN PR++ L G I
Sbjct: 250 VKEVSCGSHHSMALTLDGEVFAWGYNNCGQIG---SGSTANQPYPRKVTGCLQGKNASGI 306
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ ++ + ++ Q + + +
Sbjct: 307 TCGQTSSMALVDNGEVYGWGYNGNGQLGIG-------NNGNQLTPCRVAALQGMCIQQIV 359
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
G H LAL D L+ G N Y QL G + +S + ++ E V
Sbjct: 360 SGYGHCLALTDKGLLYAWGANTYGQLGTGTKSNHLSPVHIMADKERV 406
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I CG +AL G V+ WG GQLG ++G + P + AL G+ + QI +G
Sbjct: 306 ITCGQTSSMALVDNGEVYGWGYNGNGQLGIGNNGN--QLTPCRVAALQGMCIQQIVSGYG 363
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV-ACGSR 152
H A T G LYAWG N GQ+G K + + H M+ E +VV+V AC S
Sbjct: 364 HCLALTDKGLLYAWGANTYGQLGTGTKSNH-LSPVHIMADKE-------RVVEVAACHST 415
Query: 153 HTLA 156
HT A
Sbjct: 416 HTSA 419
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ + + I G+ HCLALT +G++++WG + GQLG +GT +N + P I
Sbjct: 344 PCRVAALQGMCIQQIVSGYGHCLALTDKGLLYAWGANTYGQLG---TGTKSNHLSPVHIM 400
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
A VV+++A SAA+TQ G ++ WG G +
Sbjct: 401 A-DKERVVEVAACHSTHTSAAKTQSGQVFMWGQCRGQSI 438
>gi|357508731|ref|XP_003624654.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
gi|124359292|gb|ABD28429.2| Regulator of chromosome condensation/beta-lactamase-inhibitor
protein II [Medicago truncatula]
gi|355499669|gb|AES80872.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
Length = 1099
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS----SGTDAN 71
+ +P ++D ++ I+ H +ALT G V++WG G G+LG+P SG A
Sbjct: 188 IQKLPCKVDSLNGSIIKLISAAKFHSVALTDRGEVYTWGFGRGGRLGHPDFDIHSGQAAV 247
Query: 72 MEPREIRALSGLG---VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
+ PR++ +SGLG V+ I+A H+ TQ G ++ WG N GQ+G V P
Sbjct: 248 ITPRQV--ISGLGSRRVMAIAAAKHHTVVATQGGEVFTWGSNREGQLGYTS----VDTQP 301
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
P S + ++V VA ++HT + D ++ G N QL G S
Sbjct: 302 TPRRVS----TLRSRIVAVAAANKHTAVISDLGEVFTWGCNREGQLGYGTSNS 350
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ +V +A H ++ G VF+WG GQLGY +S + +N P + +
Sbjct: 303 PRRVSTLRSRIVA-VAAANKHTAVISDLGEVFTWGCNREGQLGYGTSNSASNYTPHVVES 361
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G + ++SA +H+ DG ++ WG V +L P+ +
Sbjct: 362 LKGKILTRVSAAKYHTIVLGSDGEVFTWGHRLVTPKRVVITRNLKKSGSIPLKFHR---K 418
Query: 140 QNIKVVDVACGSRHTLALCDDNSLW 164
+ + VV +A G H++AL +D +L+
Sbjct: 419 ERLHVVSIAAGMAHSMALTEDGALF 443
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 31/166 (18%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
SQ+ P D L LV T++ FSWG+G+ QLG +
Sbjct: 153 SQIVRRP---DFGLSLVATEL----------------FSWGSGANYQLG--TGNAHIQKL 191
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH---- 129
P ++ +L+G + ISA +HS A T G +Y WG+ GG++ G D +H
Sbjct: 192 PCKVDSLNGSIIKLISAAKFHSVALTDRGEVYTWGFGRGGRL---GHPDFDIHSGQAAVI 248
Query: 130 -PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P S+ +V+ +A HT+ ++ G N QL
Sbjct: 249 TPRQVISGLGSR--RVMAIAAAKHHTVVATQGGEVFTWGSNREGQL 292
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 23/104 (22%)
Query: 9 PLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
PLK FH R L V IA G H +ALT++G +F W +
Sbjct: 412 PLK-----FHRKER------LHVVSIAAGMAHSMALTEDGALFYW------------ISS 448
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
D ++ +++ A+ G +V ISAG + +AA T G +Y W G
Sbjct: 449 DPDLRCQQLYAMCGRNMVNISAGKYWTAAVTATGDVYMWDGKKG 492
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGYPSSGTDANMEPR 75
+ P ++ ++T ++ H + L +G VF+WG+ + ++ + + P
Sbjct: 354 YTPHVVESLKGKILTRVSAAKYHTIVLGSDGEVFTWGHRLVTPKRVVITRNLKKSGSIPL 413
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
+ L VV I+AG HS A T+DG L+ W
Sbjct: 414 KFHRKERLHVVSIAAGMAHSMALTEDGALFYW 445
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 19/126 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + ++ACG H L LTQ V++WG+G G+LG + + EP I A
Sbjct: 188 PKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDE--EKHAEPIMITA 245
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G+GV+ IS GG+HSAA T +G LY WG + GQ+G D +S
Sbjct: 246 LQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLG-----------------HGDENS 288
Query: 140 QNIKVV 145
QNI VV
Sbjct: 289 QNIPVV 294
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG+ H AL G +++WG+G G+LG+ A+ P+ + +L G V ++A
Sbjct: 95 VKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQAS--PKLVESLQGKEVTFVAA 152
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG+HS+ + G L WG GQ+G + D P + Q +VACG
Sbjct: 153 GGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDR--KTPKMVK-----GVQQCIAHEVACG 205
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ HTL L +W G E+ +L +G
Sbjct: 206 THHTLMLTQSQEVWTWGSGEFGKLGIG 232
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V+SWG G GQLG+ T +PR + A G V Q+S G H+A ++G ++ +G
Sbjct: 8 VYSWGQGVLGQLGHGDEKT--QRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGR 65
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N GQ+G + V P +S Q V VACG HT AL D+ L+ G
Sbjct: 66 GNFGQLGQGASVTANVSTPALVS-----ALQGKHVKQVACGWHHTCALIDNGQLYTWGSG 120
Query: 170 EYNQLSMGCGVSQVS 184
EY +L G V Q S
Sbjct: 121 EYGRLGHGDEVRQAS 135
>gi|356560879|ref|XP_003548714.1| PREDICTED: uncharacterized protein LOC100814063 [Glycine max]
Length = 1080
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS----SGTD 69
+ + +P ++D + I+ G H +ALT G V++WG G G+LG+P SG
Sbjct: 172 AHIQKLPCKVDSLGGSFIKLISAGKFHSVALTARGEVYTWGFGRGGRLGHPDFDIHSGQA 231
Query: 70 ANMEPREIRALSGLG---VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
A + PR++ SGLG V+ I+A H+ TQ G ++ WG N GQ+G V
Sbjct: 232 AVITPRQV--TSGLGSRRVMAIAAAKHHTVISTQGGEVFTWGSNREGQLGYPS----VDT 285
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
P P S S ++V VA ++HT + D ++ G N QL G G S +
Sbjct: 286 QPTPRRVS----SLRSRIVAVAAANKHTAVVSDLGEVFTWGCNREGQL--GYGTSNSASN 339
Query: 187 TRLSVPEHVKNCPIVKLFAEHWNS 210
V E +K + ++ A +++
Sbjct: 340 YTPHVVESLKGKTLTRVSAAKYHT 363
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ +V +A H ++ G VF+WG GQLGY +S + +N P + +
Sbjct: 289 PRRVSSLRSRIVA-VAAANKHTAVVSDLGEVFTWGCNREGQLGYGTSNSASNYTPHVVES 347
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G + ++SA +H+ DG ++ WG V +L P+ +
Sbjct: 348 LKGKTLTRVSAAKYHTIVLGSDGEVFTWGHRLVTPKRVVVSRNLKKSGSTPLKFHR---K 404
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN----QLSMGCGVSQVSV 185
+ + VV +A G H++AL DD +L+ ++ + QL CG + VS+
Sbjct: 405 ERLNVVSIAAGMVHSMALTDDGALFYWVSSDPDLRCQQLYAMCGRNMVSI 454
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA H + TQ G VF+WG+ GQLGYPS D PR + +L +V ++A
Sbjct: 248 VMAIAAAKHHTVISTQGGEVFTWGSNREGQLGYPS--VDTQPTPRRVSSLRSR-IVAVAA 304
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
H+A + G ++ WG N GQ+G + PH + E + + V+
Sbjct: 305 ANKHTAVVSDLGEVFTWGCNREGQLGYGTSNSASNYTPHVV---ESLKGKTL--TRVSAA 359
Query: 151 SRHTLALCDDNSLWGCG 167
HT+ L D ++ G
Sbjct: 360 KYHTIVLGSDGEVFTWG 376
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
VFSWG+G+ QLG + P ++ +L G + ISAG +HS A T G +Y WG+
Sbjct: 156 VFSWGSGANYQLG--TGNAHIQKLPCKVDSLGGSFIKLISAGKFHSVALTARGEVYTWGF 213
Query: 110 NNGGQVGVEGKLDLVVHDPH-----PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
GG++ G D +H P + S+ +V+ +A HT+ ++
Sbjct: 214 GRGGRL---GHPDFDIHSGQAAVITPRQVTSGLGSR--RVMAIAAAKHHTVISTQGGEVF 268
Query: 165 GCGWNEYNQL 174
G N QL
Sbjct: 269 TWGSNREGQL 278
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 23/106 (21%)
Query: 7 SGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS 66
S PLK FH R++ V IA G H +ALT +G +F W
Sbjct: 396 STPLK-----FHRKERLN------VVSIAAGMVHSMALTDDGALFYW------------V 432
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
+D ++ +++ A+ G +V ISAG + +AA T G +Y W G
Sbjct: 433 SSDPDLRCQQLYAMCGRNMVSISAGKYWTAAVTATGDVYMWDGKKG 478
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGYPSSGTDANMEPR 75
+ P ++ +T ++ H + L +G VF+WG+ + ++ + + P
Sbjct: 340 YTPHVVESLKGKTLTRVSAAKYHTIVLGSDGEVFTWGHRLVTPKRVVVSRNLKKSGSTPL 399
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
+ L VV I+AG HS A T DG L+ W
Sbjct: 400 KFHRKERLNVVSIAAGMVHSMALTDDGALFYW 431
>gi|255074853|ref|XP_002501101.1| predicted protein [Micromonas sp. RCC299]
gi|226516364|gb|ACO62359.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 402
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 81/168 (48%), Gaps = 21/168 (12%)
Query: 20 PSRMDHFLDLVVTDIACG--FDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P+R+ + + + G HC+A+ +G VF+WG GQLG D P E+
Sbjct: 38 PTRIATLKGVSIAKVCGGSAATHCMAIAADGRVFTWGRNETGQLGL--GDVDNRAAPTEV 95
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+AL+G+ VV S G H+ T DG YAWG N GQ+GV + P ED
Sbjct: 96 KALAGIKVVDGSCGKSHTVVVTADGNAYAWGSNKHGQLGVG---SIARTKP-----KED- 146
Query: 138 DSQNIKV-------VDVACGSRHTLALC-DDNSLWGCGWNEYNQLSMG 177
D++ + V V VACG+ ++ +C DD L G +Y QL G
Sbjct: 147 DNRLVPVQCSVSACVAVACGAEFSMWICGDDGKLLSAGLPQYGQLGHG 194
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR- 78
P+ + + V D +CG H + +T +G ++WG+ GQLG G+ A +P+E
Sbjct: 92 PTEVKALAGIKVVDGSCGKSHTVVVTADGNAYAWGSNKHGQLGV---GSIARTKPKEDDN 148
Query: 79 -----ALSGLGVVQISAGGWHSA-ARTQDGFLYAWGWNNGGQV--GVEGKLDLVVH---- 126
S V ++ G S DG L + G GQ+ G +G+ ++
Sbjct: 149 RLVPVQCSVSACVAVACGAEFSMWICGDDGKLLSAGLPQYGQLGHGTDGEYNMATSSVKL 208
Query: 127 ----DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P P+ + K+ VA G HT+A+ D G+ Y +L
Sbjct: 209 AYEAQPQPLPIAA---LAGRKITKVASGHNHTIAVDDQGKFHTWGFGGYGRL 257
>gi|297740323|emb|CBI30505.3| unnamed protein product [Vitis vinifera]
Length = 478
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 7/147 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG H +T G + ++G G GQ G T + P + ALSG+ V I+A
Sbjct: 290 VKGIACGGRHSAVITDAGQLLTFGWGLHGQCGL--GNTHDQLRPACVSALSGVKVAGIAA 347
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G WH+ + +G +YA+G N GQ+G D P + S + +N + V+CG
Sbjct: 348 GLWHTLCFSAEGQVYAFGGNQFGQLGT--GADQAETLPKLLDAS---NLENKRAKIVSCG 402
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+RH++ L + ++ GWN+Y QL +G
Sbjct: 403 ARHSVVLTEGGEIFSWGWNKYGQLGLG 429
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 84/205 (40%), Gaps = 37/205 (18%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-----------------PSS-GTD--- 69
++ IA G H LAL+ G V+ WG G GQLG PS+ G D
Sbjct: 210 ISTIAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRTKLVSSPHLIPCFNPSAYGKDRPS 269
Query: 70 -----ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
+ +I + G V I+ GG HSA T G L +GW GQ G+ D +
Sbjct: 270 LVHQGSLSSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNTHDQL 329
Query: 125 VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
P S +KV +A G HTL + ++ G N++ QL G G Q
Sbjct: 330 ----RPACVSA---LSGVKVAGIAAGLWHTLCFSAEGQVYAFGGNQFGQL--GTGADQAE 380
Query: 185 VMTRLSVPEHVKN--CPIVKLFAEH 207
+ +L +++N IV A H
Sbjct: 381 TLPKLLDASNLENKRAKIVSCGARH 405
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 23/118 (19%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH------PMSWSE 135
G+ + I+AGG H+ A + G ++ WG+ GQ+G+ + L V PH P ++ +
Sbjct: 207 GVRISTIAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRTKL-VSSPHLIPCFNPSAYGK 265
Query: 136 DFDS----------QNI------KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D S ++I +V +ACG RH+ + D L GW + Q +G
Sbjct: 266 DRPSLVHQGSLSSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLG 323
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 78/196 (39%), Gaps = 26/196 (13%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGS---RGQ 60
+L SG + F +P+ + + A G+ HC++LT +G ++WG G+
Sbjct: 66 YLTSGQHGETPEPFPLPT------EAPIVKAAAGWAHCVSLTDKGEAYTWGWKECVPSGK 119
Query: 61 LGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV--E 118
+ S+G + ++L +Q G + G + + N + G +
Sbjct: 120 VLLDSTGVRFEKDSFGKQSL-----LQTEQEGPKPQSSNSTGGMLSRVDNRKAREGSIKK 174
Query: 119 GKLDLVVHDPHPMSWSEDFD----------SQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
+ +P S S+D +++ +A G RHTLAL D +WG G+
Sbjct: 175 RRTSSAKQEPESSSMSDDETFLASPCLVTLGPGVRISTIAAGGRHTLALSDMGQVWGWGY 234
Query: 169 NEYNQLSMGCGVSQVS 184
QL +G VS
Sbjct: 235 GGEGQLGLGSRTKLVS 250
>gi|374582676|ref|ZP_09655770.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Desulfosporosinus youngiae DSM 17734]
gi|374418758|gb|EHQ91193.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Desulfosporosinus youngiae DSM 17734]
Length = 747
Score = 77.0 bits (188), Expect = 6e-12, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
++ ++ G H L L+ +G V++WG+ S GQLG S + P + L+ VV ++A
Sbjct: 48 LSTVSAGMFHSLTLSSDGTVWAWGDNSEGQLGNNQSELPDSSTPVQASDLT--NVVAVAA 105
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH---PMSWSEDFDSQNIK---- 143
GG HS A DG ++ WG N GQ G GK++L+ P P + + + ++
Sbjct: 106 GGAHSLALKNDGTVWGWGNNEFGQAGF-GKIELIAGGPDFYMPEQYLKSYTPLQVQGLTD 164
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
V+ +A G ++LAL D ++W G ++ QL G
Sbjct: 165 VIAIAAGMDYSLALKADGTIWSWGSSQNGQLGNPSG 200
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 20/177 (11%)
Query: 5 LASGPLKMLSQVF---HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQL 61
+A GP + + + + P ++ D++ IA G D+ LAL +G ++SWG+ GQL
Sbjct: 138 IAGGPDFYMPEQYLKSYTPLQVQGLTDVIA--IAAGMDYSLALKADGTIWSWGSSQNGQL 195
Query: 62 GYPS-SGTDANMEPREIRALSG---LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
G PS G N+ + + +G G+ +ISAG + A DG ++ WG G V
Sbjct: 196 GNPSGKGLFTNIPAKVVVDTNGQALTGITKISAGSAFALALKDDGTVWTWG---GLLVDE 252
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
EG ++ S ++ V++++ G H+LAL D ++WG G N+ QL
Sbjct: 253 EGVHNVTSAAIQVHSLTD--------VINISAGYNHSLALKSDGTVWGWGKNDLFQL 301
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 64 PSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
P+ DA ++ R G + +SAG +HS + DG ++AWG N+ GQ+G
Sbjct: 33 PAFAADAPVQTR------GASLSTVSAGMFHSLTLSSDGTVWAWGDNSEGQLGNN----- 81
Query: 124 VVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P S + S VV VA G H+LAL +D ++WG G NE+ Q G
Sbjct: 82 --QSELPDSSTPVQASDLTNVVAVAAGGAHSLALKNDGTVWGWGNNEFGQAGFG 133
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 8/144 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +I+ G++H LAL +G V+ WG QLG + N P +I ++ V I A
Sbjct: 271 VINISAGYNHSLALKSDGTVWGWGKNDLFQLGDRDTQQSWNT-PLQISGIN--NVHSIVA 327
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G + S DG +++WG N GQ+G D V + P+S + ++ +A G
Sbjct: 328 GSYLSLVLKTDGTVWSWGGNLWGQLG-----DAVPFEQEPLSMNPVQVNELTNATALASG 382
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
+A ++W G N QL
Sbjct: 383 LGFVIARQSGGTIWAWGANSEGQL 406
Score = 43.1 bits (100), Expect = 0.093, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG--YPSSGTDANMEPREIRALSGLGVVQI 88
V I G L L +G V+SWG GQLG P +M P ++ L+ +
Sbjct: 322 VHSIVAGSYLSLVLKTDGTVWSWGGNLWGQLGDAVPFEQEPLSMNPVQVNELTN--ATAL 379
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVG 116
++G AR G ++AWG N+ GQ+G
Sbjct: 380 ASGLGFVIARQSGGTIWAWGANSEGQLG 407
>gi|383319251|ref|YP_005380092.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320621|gb|AFC99573.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 447
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
L PL + + P +++ +V I+CG HC AL + G++++WG S G LG
Sbjct: 151 QLGKNPLSFMGSL--TPIQVEGLEGVV--SISCGGSHCFALQENGVLWAWGENSHGILGD 206
Query: 64 PSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
++ + +I+ + ++S H+ A +DG ++AWG+N GQ+G G +
Sbjct: 207 GTNESQFKPVKPKIKDVKAFDAGELS----HALAVKEDGSVWAWGFNYKGQLGTGG---V 259
Query: 124 VVHDPHPMSWSEDFDSQNIKVVD-------VACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ D +S + D+ N +V VA G H++AL D S+W G N QL +
Sbjct: 260 SLSDQGRISLGREADNYNPDIVRGVSDAKAVAAGGSHSVALASDGSVWAWGSNSDGQLGL 319
Query: 177 G-CGVSQVSVMTRLSVPEHV 195
G G S V+ TR+ E V
Sbjct: 320 GHAGGSDVTSPTRVQGIEGV 339
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 79/157 (50%), Gaps = 21/157 (13%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQIS 89
V IA G H LAL +G V++WG+ S G+LG GT+ N +EP ++ L+ GV IS
Sbjct: 72 VRQIAAGSGHVLALKGDGTVWAWGSNSYGELG---DGTNENSIEPVQVAGLT--GVKAIS 126
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK----VV 145
AG S A DG ++AWG N GQ+G +P+S+ ++ VV
Sbjct: 127 AGKGFSLALKGDGSVWAWGSNTYGQLG-----------KNPLSFMGSLTPIQVEGLEGVV 175
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
++CG H AL ++ LW G N + L G SQ
Sbjct: 176 SISCGGSHCFALQENGVLWAWGENSHGILGDGTNESQ 212
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 38 FDHCLALTQEGIVFSWGNGSRGQLGYP----------SSGTDA-NMEPREIRALSGLGVV 86
H LA+ ++G V++WG +GQLG S G +A N P +R +S V
Sbjct: 231 LSHALAVKEDGSVWAWGFNYKGQLGTGGVSLSDQGRISLGREADNYNPDIVRGVSDAKAV 290
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VV 145
+AGG HS A DG ++AWG N+ GQ+G+ V P + Q I+ V
Sbjct: 291 --AAGGSHSVALASDGSVWAWGSNSDGQLGLGHAGGSDVTSPTRV--------QGIEGVT 340
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQL---SMGCGVSQVSVMTRLSVPEHVKNCPIVK 202
+A G HTLAL D S+W G N QL S S V ++ +P I
Sbjct: 341 AIAAGMYHTLALKGDGSVWAWGSNSDGQLGNASFSAASSPVPILIGPQIPTAASPTSITT 400
Query: 203 LF 204
Sbjct: 401 TI 402
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+ G LAL +G V++WG+ + GQLG ++ P ++ L G VV IS
Sbjct: 122 VKAISAGKGFSLALKGDGSVWAWGSNTYGQLGKNPLSFMGSLTPIQVEGLEG--VVSISC 179
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H A ++G L+AWG N+ G +G +G + P +++K D A
Sbjct: 180 GGSHCFALQENGVLWAWGENSHGILG-DGTNESQFKPVKP-------KIKDVKAFD-AGE 230
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
H LA+ +D S+W G+N QL G GVS +S R+S+ N
Sbjct: 231 LSHALAVKEDGSVWAWGFNYKGQLGTG-GVS-LSDQGRISLGREADN 275
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+A G H +AL +G V++WG+ S GQLG +G P ++ + GV I+AG +
Sbjct: 290 VAAGGSHSVALASDGSVWAWGSNSDGQLGLGHAGGSDVTSPTRVQGIE--GVTAIAAGMY 347
Query: 94 HSAARTQDGFLYAWGWNNGGQVG 116
H+ A DG ++AWG N+ GQ+G
Sbjct: 348 HTLALKGDGSVWAWGSNSDGQLG 370
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
GV QI+AG H A DG ++AWG N+ G++G +G + + +
Sbjct: 71 GVRQIAAGSGHVLALKGDGTVWAWGSNSYGELG-DGTNENSIEPVQVAGLT--------G 121
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
V ++ G +LAL D S+W G N Y QL G + +S M L+
Sbjct: 122 VKAISAGKGFSLALKGDGSVWAWGSNTYGQL----GKNPLSFMGSLT 164
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
VT IA G H LAL +G V++WG+ S GQLG S
Sbjct: 339 VTAIAAGMYHTLALKGDGSVWAWGSNSDGQLGNAS 373
>gi|355694495|gb|AER99688.1| hect domain and RLD 4 [Mustela putorius furo]
Length = 181
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 10/142 (7%)
Query: 36 CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHS 95
CG H + + +G V++ G GQLG+ S +P ++ AL +V +S G H+
Sbjct: 2 CGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVALDAQNIVAVSCGEAHT 57
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTL 155
A G +YAWG ++ GQ+G+ G + + + S S+ I+VV VACG H+L
Sbjct: 58 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSD------IQVVQVACGYYHSL 111
Query: 156 ALCDDNSLWGCGWNEYNQLSMG 177
AL + ++ G N+Y QL +G
Sbjct: 112 ALSKASEVFSWGQNKYGQLGLG 133
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 6 ASGPLKML--SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ V +ACG+ H LAL++ VFSWG GQLG
Sbjct: 73 SDGQLGLLGSEECIRVPRNIKSLSDIQVVQVACGYYHSLALSKASEVFSWGQNKYGQLGL 132
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGG 113
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N G
Sbjct: 133 ---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 181
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++CG H LAL +G V++WG S GQLG S + PR I++LS + VVQ++
Sbjct: 47 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS-EECIRVPRNIKSLSDIQVVQVAC 105
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HS A ++ +++WG N GQ+G L + S I + VA G
Sbjct: 106 GYYHSLALSKASEVFSWGQNKYGQLG------LGIDCKKQASPQLIKSLLGIPFMQVAAG 159
Query: 151 SRHTLALCDDNSLWGCGWNEY 171
H+ L +++G G N++
Sbjct: 160 GAHSFVLTLSGAIFGWGRNKF 180
>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
Length = 794
Score = 77.0 bits (188), Expect = 6e-12, Method: Composition-based stats.
Identities = 52/155 (33%), Positives = 73/155 (47%), Gaps = 19/155 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG H L L Q+G VF+WG ++G ++ N EPR + L G +V I
Sbjct: 262 VKQVACGDYHTLCLMQDGQVFAWGGTLHKKVGEKNAQAQNN-EPRIVSGLQGKQIVHIDC 320
Query: 91 GGWHSAARTQDGFLYAWGWN----NGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI---K 143
G +HS A G +Y+WG N GQ G D+ + Q I K
Sbjct: 321 GDFHSVALDIQGRVYSWGGGGASYNKGQCGHGNNEDI----------EQPIQVQGIAHRK 370
Query: 144 VVDVACGSRHTLALC-DDNSLWGCGWNEYNQLSMG 177
+V ++ G HTLALC +DN L+ G Y + +G
Sbjct: 371 IVQISAGGFHTLALCEEDNELYAWGSGTYGECGLG 405
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 26/165 (15%)
Query: 31 VTDIACGFDHCLALTQE-GIVFSWGNGSRGQLGY----PSSGTDANMEPREIRALSGLG- 84
+ I+ G H LAL +E +++WG+G+ G+ G SS P++ + +
Sbjct: 371 IVQISAGGFHTLALCEEDNELYAWGSGTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQ 430
Query: 85 -------------VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
+ QISAGG H+ T G +Y++G+ + GQ+G+ + P +
Sbjct: 431 MQNEFAFSSQKPLITQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFC--SPQLV 488
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+D S+NIK + A G H+L L D L+ CG+ + QL +
Sbjct: 489 ---KDLLSKNIKAI--AAGWNHSLILSDKGDLFACGYGNHGQLGL 528
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
++T I+ G H L LT G V+S+G GS GQLG S T P+ ++ L + I+
Sbjct: 443 LITQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRS--TKNFCSPQLVKDLLSKNIKAIA 500
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
AG HS + G L+A G+ N GQ+G+ K
Sbjct: 501 AGWNHSLILSDKGDLFACGYGNHGQLGLNDK 531
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ-ISAGGWHSAARTQDGF 103
T++ ++S+G S G+LG S +P I+ L + IS+G HSA T+ G
Sbjct: 163 TKKAYIWSFGKNSDGELGISSQKDQFLPKPISIQNLKLSHTAKYISSGSHHSAIVTKAGE 222
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE----DFDSQNIKVVDVACGSRHTLALCD 159
LY G G++G++ V+ H +++ D N KV VACG HTL L
Sbjct: 223 LYVSGSQLHGKLGIQS-----VNGMHVSKFTQVTMFDGIKVNQKVKQVACGDYHTLCLMQ 277
Query: 160 DNSLWGCG 167
D ++ G
Sbjct: 278 DGQVFAWG 285
Score = 45.4 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV----VQIS 89
I+ G H +T+ G ++ G+ G+LG S + ++ G+ V Q++
Sbjct: 207 ISSGSHHSAIVTKAGELYVSGSQLHGKLGIQSVNGMHVSKFTQVTMFDGIKVNQKVKQVA 266
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G +H+ QDG ++AWG +VG E ++P +S Q ++V + C
Sbjct: 267 CGDYHTLCLMQDGQVFAWGGTLHKKVG-EKNAQAQNNEPRIVS-----GLQGKQIVHIDC 320
Query: 150 GSRHTLALCDDNSL--WGCGWNEYNQLSMGCG 179
G H++AL + WG G YN+ G G
Sbjct: 321 GDFHSVALDIQGRVYSWGGGGASYNKGQCGHG 352
Score = 40.4 bits (93), Expect = 0.61, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR- 75
F P + L + IA G++H L L+ +G +F+ G G+ GQLG + EPR
Sbjct: 482 FCSPQLVKDLLSKNIKAIAAGWNHSLILSDKGDLFACGYGNHGQLGL------NDKEPRT 535
Query: 76 ---EIRALSGLGVVQISAGGWHS 95
+ L G I AGG HS
Sbjct: 536 QFTHVANLGGKNAYNIYAGGNHS 558
>gi|195449389|ref|XP_002072053.1| GK22640 [Drosophila willistoni]
gi|194168138|gb|EDW83039.1| GK22640 [Drosophila willistoni]
Length = 1261
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQI 88
+ IACG +H LALT +G ++SWG+ GQLG +N P + ++ G+ + I
Sbjct: 128 LFVQIACGNEHSLALTNDGTIYSWGSNRYGQLGMSEPENMSNCHFPMHLTSIHGIPIATI 187
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ GG H ++ +Y WG NN GQ+G+ D P+P +E + V VA
Sbjct: 188 ACGGNHCFLISKSSAVYGWGRNNRGQLGLNDLSD----RPYP---TELTTLRPCGVRYVA 240
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG ++ L +L+ CG + QL G
Sbjct: 241 CGDEFSVFLTHKGALFTCGDGTHGQLGHG 269
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVV 86
D+ V+ IACG H L LT+ G+V SWG GQLG ++ M + + + L V
Sbjct: 75 DIEVSAIACGSSHSLVLTKSGVVMSWGVNDCGQLGQTTNSRVPTMVKVPDKKPL----FV 130
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSEDFDSQNIKVV 145
QI+ G HS A T DG +Y+WG N GQ+G+ ++ H P ++ I +
Sbjct: 131 QIACGNEHSLALTNDGTIYSWGSNRYGQLGMSEPENMSNCHFPMHLT-----SIHGIPIA 185
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ACG H + ++++G G N QL +
Sbjct: 186 TIACGGNHCFLISKSSAVYGWGRNNRGQLGL 216
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 30/171 (17%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP-REIRALSGLGVVQIS 89
+ DIA G + L LT +G V+ + GQ+ ++ + + P R + L + V I+
Sbjct: 27 LRDIAFGDRYTLFLTAKGKVYECE--THGQVH--NTRKRSRLSPFRLVAGLQDIEVSAIA 82
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
G HS T+ G + +WG N+ GQ+G ++ +V P D + + V +
Sbjct: 83 CGSSHSLVLTKSGVVMSWGVNDCGQLGQTTNSRVPTMVKVP---------DKKPL-FVQI 132
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
ACG+ H+LAL +D +++ G N Y QL M S PE++ NC
Sbjct: 133 ACGNEHSLALTNDGTIYSWGSNRYGQLGM-------------SEPENMSNC 170
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 10/151 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H P + + + IACG +HC +++ V+ WG +RGQLG + P E+
Sbjct: 171 HFPMHLTSIHGIPIATIACGGNHCFLISKSSAVYGWGRNNRGQLGL--NDLSDRPYPTEL 228
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L GV ++ G S T G L+ G GQ+G G L + ++ +
Sbjct: 229 TTLRPCGVRYVACGDEFSVFLTHKGALFTCGDGTHGQLG-HGNLS------NALAPFKVM 281
Query: 138 DSQNIKVVDVACGSRHTLALCDD-NSLWGCG 167
++ V VAC +TLA L+G G
Sbjct: 282 KLRDKPVTQVACAKHYTLAFVPSIGQLYGFG 312
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ ++ F D + D++CG+ H A+T G+ + WG+ + Q G PSS PR I
Sbjct: 394 PTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELSSPRGIVL 453
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
SG+ QI+ G + T G L+ WG N GQ+G G+ P P+ E
Sbjct: 454 PSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLG-NGEAKKTFSQPMPV---ESLSE 509
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGW--NEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
+ +K+ VACG H L G GW +E + M C S ++ R H +
Sbjct: 510 KRVKM--VACGEDHI------GCLVGHGWVPDEEVKSCMACKKSFTAIRRR----HHCRQ 557
Query: 198 C 198
C
Sbjct: 558 C 558
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ ++ L VT IACG H +AL +G VFSWG G +G LG+ P I
Sbjct: 185 LPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGH--GNLRDRYSPLMID 242
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L + VV ++ HSA ++DG LY WG G +G D V P +
Sbjct: 243 GPLRDVNVVHVACYENHSAVISEDGNLYTWG-KAGPFLGYMD--DSVTKQTKPRLVDALY 299
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
+ ++V VACG HTL + ++ ++ G N++ +L G ++ VP V
Sbjct: 300 GT---RIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQG---HDKAITKPTMVPNLVSI 353
Query: 198 CPI 200
C +
Sbjct: 354 CKV 356
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG--YPSSGTDANMEPREI 77
P +D + +ACG H L + +EG V+S+G G+LG + + T M P +
Sbjct: 292 PRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMVPNLV 351
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ ++S G HSAA +DG L+ WGW GQ+G L P P++ F
Sbjct: 352 ------SICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPKSLF--SPTPVN---GF 400
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
+ Q ++ DV+CG HT A+ + + G N +Q CGV SV LS P +
Sbjct: 401 NDQPLE--DVSCGYGHTAAITANGVAYCWGDNASSQ----CGVPS-SVYGELSSPRGI 451
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++CG H A+ ++G++F WG G+RGQLG + P + + + +S
Sbjct: 353 ICKVSCGRHHSAAIDEDGVLFMWGWGARGQLG--QGEPKSLFSPTPVNGFNDQPLEDVSC 410
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+AA T +G Y WG N Q GV + + P + I+ + CG
Sbjct: 411 GYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELSSPRGIVLPS-----GIRPTQINCG 465
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ T+ + L+ G N QL G
Sbjct: 466 ANFTVLVTSIGQLFTWGCNMSGQLGNG 492
>gi|449685230|ref|XP_004210847.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Hydra
magnipapillata]
Length = 1020
Score = 77.0 bits (188), Expect = 6e-12, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
++ P R+D F + + CG D + LT+ G V+S G+ G LG + P
Sbjct: 527 MYRTPKRVDFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYYGCLGCEGIYGSNVLTPI 586
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+I ALS L VV I+ G H A T G +Y WG G++G+ + D + P ++ E
Sbjct: 587 KIDALSKLKVVSIACGDCHVVALTNIGSVYTWGNGEHGRLGLGNQNDFNL--PQLVTLPE 644
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
++ +V + CG +T L + L G NE N+L++ +S
Sbjct: 645 KYNY----IVKITCGRDNTFILTSNGHLLAFGNNECNKLALNQTIS 686
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 18 HMPSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGN--GSRGQLGYPSSGTDANME- 73
H+P ++D F +++ GF H +T E +++W N G +G G A
Sbjct: 471 HIPQKLDVFTGGSTAIEVSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRAMYRT 530
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ + +G+ + Q G + T+ G +Y+ G + G +G EG V P +
Sbjct: 531 PKRVDFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYYGCLGCEGIYGSNVLTPIKID- 589
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+KVV +ACG H +AL + S++ G E+ +L +G
Sbjct: 590 ----ALSKLKVVSIACGDCHVVALTNIGSVYTWGNGEHGRLGLG 629
Score = 43.5 bits (101), Expect = 0.069, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 96/241 (39%), Gaps = 55/241 (22%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS-----G 67
L Q+ +P + ++ + I CG D+ LT G + ++GN +L +
Sbjct: 636 LPQLVTLPEKYNY-----IVKITCGRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGN 690
Query: 68 TDANME---------PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
TD + P +R L +V +++G HSA + G L +G N G++G+
Sbjct: 691 TDKSSTQQKVSYVTLPTPVRPLRSYRIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGLG 750
Query: 119 GKLDLVVHDPHPMSWSEDFDSQNI-----------KVVDVACGSRHTLALCDDNSLWGCG 167
D+ S+N +V CG T+ DN ++ G
Sbjct: 751 -----------------DYQSRNFPSLVSGLLNGKEVTICNCGDNFTVVATADNQIFSWG 793
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC--PIVKLFAEHWNSARLSVPEHAKDSSIV 225
E +L G++ + +T+ P+ + +V + A W++ L+ E +S ++
Sbjct: 794 CGENGRL----GLNLSNGITKCCSPKPIFGSLHKVVSMAARSWSTIILA--ERVLNSKLI 847
Query: 226 K 226
+
Sbjct: 848 Q 848
>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
Length = 534
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +++ + ++ G H L T++G+V++WG+ QLG + T+ + P ++
Sbjct: 71 IPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG--NGTTNQGIAPIQV 128
Query: 78 -RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L VV+++ G HS A DG ++AWG+NN GQVG + P P +
Sbjct: 129 CTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGS----TANQPTPRKVTNC 184
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ +VV +ACG ++A+ D+ ++G G+N QL +G V+Q++
Sbjct: 185 LHIK--RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNVNQLT 230
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI-RALSGLGVVQI 88
V ++ACG H +AL +G VF+WG + GQ+G SG+ AN PR++ L VV I
Sbjct: 137 VVEVACGSHHSVALAADGEVFAWGYNNCGQVG---SGSTANQPTPRKVTNCLHIKRVVGI 193
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ ++ + P+ + ++ V +
Sbjct: 194 ACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNVNQLT----PVRVAA---LHSVCVNQIV 246
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTLAL D+ L+ G N Y QL G
Sbjct: 247 CGYAHTLALTDEGLLYAWGANTYGQLGTG 275
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQIS 89
V IACG +A+ G V+ WG GQLG G + N + P + AL + V QI
Sbjct: 190 VVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL---GNNVNQLTPVRVAALHSVCVNQIV 246
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV-A 148
G H+ A T +G LYAWG N GQ+G K +L + H M E +VV++ A
Sbjct: 247 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNL-LSPAHIMVEKE-------RVVEIAA 298
Query: 149 CGSRHTLA 156
C S HT A
Sbjct: 299 CHSAHTSA 306
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 35 ACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
AC F + L +T VF +G LG + + + P+++ AL G + +S
Sbjct: 31 ACVFGTSANEALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLIPKKLEALCGKKIKSLSY 88
Query: 91 G-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G G H T+DG +YAWG N Q+G G + + P+ + + +VV+VAC
Sbjct: 89 GSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTTNQGI---APIQVCTNLLIK--QVVEVAC 142
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVK 202
GS H++AL D ++ G+N Q+ G +Q P V NC +K
Sbjct: 143 GSHHSVALAADGEVFAWGYNNCGQVGSGSTANQ-------PTPRKVTNCLHIK 188
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V I CG+ H LALT EG++++WG + GQLG +G N+
Sbjct: 231 PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIM 287
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ VV+I+A SAA+TQ G +Y WG G V
Sbjct: 288 VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 325
>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
Length = 903
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 107/262 (40%), Gaps = 62/262 (23%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S+V +P + HF D +T IACG + LAL+ G VFSWG G G LGY S +
Sbjct: 297 SEVVSIPKIIPHFEDEKITSIACGQEFSLALSDSGKVFSWGKGLHGNLGYDVSTMLSQST 356
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWN---------NGG----------- 113
P+ I L QIS G WHS ++ G +Y +G N NG
Sbjct: 357 PKVIPMLPPAS--QISCGNWHSMVLSKSGDVYTFGSNIDCRLGHSGNGSTPTMVQIGSKI 414
Query: 114 -QVGVEGKLDLVVHDPHPM-SWSEDF----------------DSQNIKVV------DVAC 149
++G + V+ + + + +W + + Q +K + +
Sbjct: 415 KKIGAGANFNAVLSESNAIYTWGSNIHCQLGVLLPDHRNYTGEPQVVKTLLPYPISTIEV 474
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWN 209
G H + L D ++ G N Q +G + +V TR+ +P+ N + K+ A
Sbjct: 475 GYEHVVVLTDTGEVFTFGDNSMMQCGVGEAIKEVCNFTRVKIPD---NSTVFKIAA---- 527
Query: 210 SARLSVPEHAKDSSIVKLFAGH 231
+SS++ L +GH
Sbjct: 528 ---------GGNSSLISLSSGH 540
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG 91
T I G + + LT G V+SWG S G+LG+P+ D ++ P I A + QI+ G
Sbjct: 211 TTIKFGQNFAVMLTDTGGVYSWGLCSYGKLGHPTKN-DISI-PSMISAFKNKQITQIACG 268
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
HS A + G +YAWG +GG++G+ VV P + ED K+ +ACG
Sbjct: 269 KDHSLALDEIGVVYAWGNGSGGRLGLGN--SEVVSIPKIIPHFEDE-----KITSIACGQ 321
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
+LAL D ++ G + L VS M S P+ + P
Sbjct: 322 EFSLALSDSGKVFSWGKGLHGNLGY-----DVSTMLSQSTPKVIPMLP 364
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+PS + F + +T IACG DH LAL + G+V++WGNGS G+LG +S + P+ I
Sbjct: 250 IPSMISAFKNKQITQIACGKDHSLALDEIGVVYAWGNGSGGRLGLGNS--EVVSIPKIIP 307
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH--PMSWSED 136
+ I+ G S A + G +++WG G +G + L P PM
Sbjct: 308 HFEDEKITSIACGQEFSLALSDSGKVFSWGKGLHGNLGYDVSTMLSQSTPKVIPMLPPAS 367
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
++CG+ H++ L ++ G N
Sbjct: 368 ---------QISCGNWHSMVLSKSGDVYTFGSN 391
>gi|147790448|emb|CAN69973.1| hypothetical protein VITISV_001453 [Vitis vinifera]
Length = 498
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG H +T G + ++G G GQ G T + P + ALSG+ V I+A
Sbjct: 291 VKGIACGGRHSAVITDAGQLLTFGWGLHGQCGL--GNTHDQLRPACVSALSGVKVXGIAA 348
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDFDSQNIKVVD- 146
G WH+ + +G +YA+G N GQ+G + + D + P + + K++D
Sbjct: 349 GLWHTLCFSAEGQVYAFGGNQFGQLGTGADQAEFDSRIXIPSLGEFRKRLTETLPKLLDA 408
Query: 147 ----------VACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V+CG+RH++ L + ++ GWN+Y QL +G
Sbjct: 409 SNLENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLG 449
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 80/190 (42%), Gaps = 39/190 (20%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-----------------PSS------- 66
++ +A G H LAL+ G V+ WG G GQLG PS+
Sbjct: 211 ISTVAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRTKLVSSPHLIPCFNPSAYGKDRPS 270
Query: 67 ----GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD 122
G+ ++ E +I + G V I+ GG HSA T G L +GW GQ G+ D
Sbjct: 271 LVHQGSLSSTE--DISKVPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNTHD 328
Query: 123 LVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
+ P S +KV +A G HTL + ++ G N++ QL G G Q
Sbjct: 329 QL----RPACVSA---LSGVKVXGIAAGLWHTLCFSAEGQVYAFGGNQFGQL--GTGADQ 379
Query: 183 VSVMTRLSVP 192
+R+ +P
Sbjct: 380 AEFDSRIXIP 389
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 23/118 (19%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH------PMSWSE 135
G+ + ++AGG H+ A + G ++ WG+ GQ+G+ + L V PH P ++ +
Sbjct: 208 GVRISTVAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRTKL-VSSPHLIPCFNPSAYGK 266
Query: 136 DFDS----------QNI------KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D S ++I +V +ACG RH+ + D L GW + Q +G
Sbjct: 267 DRPSLVHQGSLSSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLG 324
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 36/197 (18%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGS---RGQ 60
+L SG + F +P+ + + A G+ HC++LT +G ++WG G+
Sbjct: 75 YLTSGQHGETPEPFPLPT------EAPIVKAAAGWAHCVSLTDKGEAYTWGWKECVPSGK 128
Query: 61 LGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAA---RTQDGFLYAWGWNNGGQVGV 117
+ S+GT N+ E+ S GG S + ++G +
Sbjct: 129 VLLDSTGT--NVAKPELDTEGPKPQXSNSTGGMLSRVDNRKAREGSIK------------ 174
Query: 118 EGKLDLVVHDPHPMSWSEDFD----------SQNIKVVDVACGSRHTLALCDDNSLWGCG 167
+ + +P S S+D +++ VA G RHTLAL D +WG G
Sbjct: 175 KRRTSSAKQEPESSSMSDDETFLASPCLVTLGPGVRISTVAAGGRHTLALSDMGQVWGWG 234
Query: 168 WNEYNQLSMGCGVSQVS 184
+ QL +G VS
Sbjct: 235 YGGEGQLGLGSRTKLVS 251
>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 708
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 96/205 (46%), Gaps = 49/205 (23%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +A G H LA+ +G V++WGN S GQLG S D EP +R LS GVV ++A
Sbjct: 62 VVTVAAGGGHSLAVHSDGTVWAWGNNSSGQLGDGS--FDNRAEPVRVRGLS--GVVAVAA 117
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-------------------------LVV 125
GG+HS A + DG ++AWG N+ GQ+G +G D V
Sbjct: 118 GGYHSLAVSADGTVWAWGNNSSGQLG-DGSFDNRAEPVRVRGSSGVVAVAAGGAHSLAVR 176
Query: 126 HDPHPMSWSEDF-----------DSQNIKV------VDVACGSRHTLALCDDNSLWGCGW 168
D +W ++ S+ ++V V V+ G+ H+LA+ D ++W G
Sbjct: 177 SDGILWAWGDNLYGQLGNRGEFNSSEPVQVLRVTGGVTVSAGANHSLAVSADGTVWAWGD 236
Query: 169 NEYNQLSMGCGVSQVSVMTRLSVPE 193
N + QL + +S+ R VPE
Sbjct: 237 NSHGQLGIARTTPLLSIPGR--VPE 259
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P R+D ++V +A G H LAL +G V +WG+ + GQLG GT A+ P ++R
Sbjct: 404 PVRVDGLKEVVA--VAAGSSHSLALLADGTVLAWGDNTFGQLG---DGTRASHSVPAQVR 458
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G VV ++AG HS A DG ++ WG+N GQ+G +G ++P + E
Sbjct: 459 GLRG--VVAVAAGSSHSLALLADGTVWTWGYNLNGQLG-DGTTTY-RYEPVAVKGLE--- 511
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
VV VA G H+LA+ D + W G N QL G
Sbjct: 512 ----GVVAVAAGGNHSLAVRSDGTAWAWGENVKGQLGDGT 547
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G H L++ Q+G V++ G S GQLG ++ ++ +R L GVV ++AGG
Sbjct: 15 IATGGSHSLSVHQDGTVWAVGGNSVGQLGDGTT----SLRRVPVRVLGLSGVVTVAAGGG 70
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSR 152
HS A DG ++AWG N+ GQ+G +G D + +E + + VV VA G
Sbjct: 71 HSLAVHSDGTVWAWGNNSSGQLG-DGSFD---------NRAEPVRVRGLSGVVAVAAGGY 120
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGC 178
H+LA+ D ++W G N QL G
Sbjct: 121 HSLAVSADGTVWAWGNNSSGQLGDGS 146
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 77/187 (41%), Gaps = 43/187 (22%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +A G H LAL +G V++WG GQLG + T EP ++ L G VV ++A
Sbjct: 463 VVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDGT--TTYRYEPVAVKGLEG--VVAVAA 518
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVG----------------------VEGKLDLVVHDP 128
GG HS A DG +AWG N GQ+G +G V D
Sbjct: 519 GGNHSLAVRSDGTAWAWGENVKGQLGDGTLTSRPAPVEVKAAAKAVAAAQGLSLAVGSDG 578
Query: 129 HPMSWSEDFDSQ-----------------NIKVVDVACGSRHTLALCDDNSLWGCGWNEY 171
P +W + Q +VV VA G+ H+LAL + +W G N
Sbjct: 579 FPWAWGNNSSGQLGDGSTTSRPMPMRVQGAGEVVAVAAGNGHSLALSPEGGVWAWGQNAR 638
Query: 172 NQLSMGC 178
QL G
Sbjct: 639 GQLGEGT 645
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR--EIRALSGLGVVQISAG 91
++ G +H LA++ +G V++WG+ S GQLG + ++ R E+R G V ++AG
Sbjct: 215 VSAGANHSLAVSADGTVWAWGDNSHGQLGIARTTPLLSIPGRVPEVR-----GSVAMAAG 269
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
HS A DG ++AWG N GQ+G +D +P + E + VA GS
Sbjct: 270 DNHSLAVRDDGTVWAWGSNGHGQLGNGFMVD--NSEPGRVPGLEGVGA-------VAAGS 320
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR 188
H+LA+ DD ++W G N Q G Q+S TR
Sbjct: 321 NHSLAVRDDGTVWAWGSNVEGQRGDGT-TGQLSAPTR 356
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
H LA++ +G ++WG+ S G+LG S+ P +R VV ++AG HS A
Sbjct: 372 HSLAVSADGSAWAWGHNSHGELGDGST----RNSPAPVRVDGLKEVVAVAAGSSHSLALL 427
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSRHTLALC 158
DG + AWG N GQ+G D S S + ++ VV VA GS H+LAL
Sbjct: 428 ADGTVLAWGDNTFGQLG----------DGTRASHSVPAQVRGLRGVVAVAAGSSHSLALL 477
Query: 159 DDNSLWGCGWNEYNQLSMGC 178
D ++W G+N QL G
Sbjct: 478 ADGTVWTWGYNLNGQLGDGT 497
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 83/175 (47%), Gaps = 20/175 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +A G +H LA+ +G V++WG+ GQ G GT + R GVV ++A
Sbjct: 313 VGAVAAGSNHSLAVRDDGTVWAWGSNVEGQRG---DGTTGQLSA-PTRVPGVSGVVGVAA 368
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
+HS A + DG +AWG N+ G++G +G + P P+ D +VV VA G
Sbjct: 369 NVFHSLAVSADGSAWAWGHNSHGELG-DGSTR---NSPAPVR----VDGLK-EVVAVAAG 419
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
S H+LAL D ++ G N + QL G S SVP V+ V A
Sbjct: 420 SSHSLALLADGTVLAWGDNTFGQLGDGTRASH-------SVPAQVRGLRGVVAVA 467
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 41 CLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQ 100
LA+ +G ++WGN S GQLG S+ P +R VV ++AG HS A +
Sbjct: 571 SLAVGSDGFPWAWGNNSSGQLGDGST----TSRPMPMRVQGAGEVVAVAAGNGHSLALSP 626
Query: 101 DGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
+G ++AWG N GQ+G EG LD + S +LA+ DD
Sbjct: 627 EGGVWAWGQNARGQLG-EGTLDRRLAPTRVQGLSGVVAVAAGGAF--------SLAVRDD 677
Query: 161 NSLWGCGWNEYNQL 174
S+W G N + QL
Sbjct: 678 GSVWSWGDNAFGQL 691
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP R+ ++V +A G H LAL+ EG V++WG +RGQLG + D + P ++
Sbjct: 601 MPMRVQGAGEVVA--VAAGNGHSLALSPEGGVWAWGQNARGQLGEGT--LDRRLAPTRVQ 656
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
LSG+ V S A DG +++WG N GQ+G
Sbjct: 657 GLSGVVAVAAGGA--FSLAVRDDGSVWSWGDNAFGQLG 692
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+I+ GG HS + QDG ++A G N+ GQ+G +G L + S VV
Sbjct: 13 ARIATGGSHSLSVHQDGTVWAVGGNSVGQLG-DGTTSLRRVPVRVLGLS--------GVV 63
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
VA G H+LA+ D ++W G N QL G
Sbjct: 64 TVAAGGGHSLAVHSDGTVWAWGNNSSGQLGDGS 96
>gi|148922863|ref|NP_001092233.1| uncharacterized protein LOC100073325 [Danio rerio]
gi|146218416|gb|AAI39898.1| Zgc:163136 protein [Danio rerio]
Length = 994
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 90/194 (46%), Gaps = 12/194 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + ++ V I+ G +H L+ G+VF WG+ S GQLG T P +++
Sbjct: 160 PQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGL--GDTTDRFIPTIVKS 217
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LSG V IS GG H+A ++ G ++ +G GQ+G D + HP +E + S
Sbjct: 218 LSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKD----EHHPRLVAELWGS 273
Query: 140 QNIKVVDVACGSRHTLALCD-DNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
KV V CG HTL D N ++ G QL G V Q SV + +P
Sbjct: 274 ---KVSQVTCGRHHTLVFEDSSNRIYSFGCGMQGQLGNGEQVKQ-SVPLPVLLPTECTEF 329
Query: 199 PIVKLFA-EHWNSA 211
+ KL A EH + A
Sbjct: 330 TMEKLIAGEHHSFA 343
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANMEPREIRALSGLGVVQI 88
V IACG H +AL+ +G++F WG + GQLG +GT + P+ +++L + V QI
Sbjct: 118 VIQIACGDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQS---PQHLQSLCEIPVAQI 174
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
SAGG HS + G ++ WG N+ GQ+G+ D + P + K V ++
Sbjct: 175 SAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFI--PTIVK-----SLSGKKTVSIS 227
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
CG HT L +++ G + QL
Sbjct: 228 CGGEHTATLSKGGTVFTFGSGGFGQL 253
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R ++ L V+QI+ G HS A + DG L+ WG N GQ+G+ + H S
Sbjct: 108 RPLKGLDNRQVIQIACGDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQSPQHLQSLC 167
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E I V ++ G H+ L ++G G N QL +G
Sbjct: 168 E------IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLG 204
>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Rattus norvegicus]
Length = 531
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +++ + ++ G H L T++G+V++WG+ QLG + T+ + P ++
Sbjct: 64 VPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG--NGTTNQGIAPIQV 121
Query: 78 -RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L VV+++ G HS A DG L+AWG+NN GQVG + P P +
Sbjct: 122 CTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGS----TANQPTPRKVTNC 177
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
++ KVV++ACG ++A+ D ++G G+N QL +G +Q++
Sbjct: 178 LHTK--KVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI-RALSGLGVVQI 88
V ++ACG H +AL +G +F+WG + GQ+G SG+ AN PR++ L VV I
Sbjct: 130 VVEVACGSHHSMALAADGELFAWGYNNCGQVG---SGSTANQPTPRKVTNCLHTKKVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G+ ++ + ++ + V +
Sbjct: 187 ACGQTSSMAVLDSGEVYGWGYNGNGQLGLG-------NNGNQLTPVRVAALHGVCVNQIV 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTLAL D+ L+ G N Y QL G
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +IACG +A+ G V+ WG GQLG ++G + P + AL G+ V QI
Sbjct: 183 VVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--QLTPVRVAALHGVCVNQIVC 240
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV-AC 149
G H+ A T +G LYAWG N GQ+G K +L+ P + ++ +V+++ AC
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLL--SPTQIMVEKE------RVIEIAAC 292
Query: 150 GSRHTLA 156
S HT A
Sbjct: 293 HSTHTSA 299
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ + V I CG+ H LALT EG++++WG + GQLG +G+ N + P +I
Sbjct: 224 PVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQI- 279
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ V++I+A SAA+TQ G +Y WG G V
Sbjct: 280 MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 318
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 16/158 (10%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG-GWHSAARTQ 100
+ +T VF +G LG + + + P+++ AL G + +S G G H T+
Sbjct: 35 IYVTDSDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTE 92
Query: 101 DGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
DG +YAWG N Q+G G + + P+ + + +VV+VACGS H++AL D
Sbjct: 93 DGVVYAWGHNGYSQLG-NGTTNQGI---APIQVCTNLLVK--QVVEVACGSHHSMALAAD 146
Query: 161 NSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
L+ G+N Q+ G +Q P V NC
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQ-------PTPRKVTNC 177
>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1173
Score = 77.0 bits (188), Expect = 6e-12, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS+ + + ++ G+ +AL +G ++SWG+ SRGQLG + + P ++ A
Sbjct: 752 PSKAEAPAGVTFVHVSAGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEA 811
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+G+ VQ SAGG H A + DG +Y WG N+ GQ+G V +P D+
Sbjct: 812 PAGITFVQASAGGSHVVALSSDGNIYTWGDNSAGQLG------RTVTSNNPADKPGKADT 865
Query: 140 -QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
++ V+ G HT+A+ ++ G N + +L
Sbjct: 866 PADVTFTSVSAGQGHTVAVDTQGDVYTWGDNTHGEL 901
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLG------YPSSGTDANMEPREIRALSGLGV 85
T ++ G+ H LA+ +G ++SWGN + G+LG P + +P+ + +G+
Sbjct: 221 TQVSTGYTHFLAIGSDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKLVTPPAGVHF 280
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
Q AG WHS A DG LY+WG N G++G + + P ++ + K+
Sbjct: 281 TQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGI----TKIT 336
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
++ G+ +++AL D L+ G N Y++L G
Sbjct: 337 QISAGTFYSMALDSDGDLYSWGDNTYDELGRYAG 370
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIRALSGLG-VVQI 88
+T I+ G + +AL +G ++SWG+ + +LG + G + PR++ +G+ I
Sbjct: 335 ITQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKKFTWI 394
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
AG W S A + DG LY+WGWN GQ+G P ++ + K V+
Sbjct: 395 KAGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVT----MPAGVTKFTKVS 450
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
RH+LAL D +L+ G N+ QL G ++ V
Sbjct: 451 AEHRHSLALGSDGNLYSWGLNDCKQLGRDTGSAKYDV 487
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D + T + G H +A++ +G +++WG+ + G+LG ++ T A+ +P +
Sbjct: 913 PGKADTPAGITFTQASAGESHSVAVSDDGSIYTWGDTANGRLGRDTNITPAD-KPGKADT 971
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+G+ Q SAGG HS A DG LY WG + G K+D
Sbjct: 972 PAGVTFTQASAGGKHSIALGSDGSLYTWGDSGKTSAGRPNKVD---------------TP 1016
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
I + G+ + LAL D +L+ G N QL G + + + + PE
Sbjct: 1017 AGITFTQASAGASYCLALGSDGNLYSWGDNAKGQLGRDTGDTWSASPAKDNFPE 1070
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
H A+ +G +++WG+ S GQLG + + P + A +G+ V +SAG S A
Sbjct: 719 HSAAVGSDGSLYTWGDNSHGQLGR-DTADKPDSHPSKAEAPAGVTFVHVSAGYGFSVALA 777
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
DG LY+WG N+ GQ+G + + PH + I V + G H +AL
Sbjct: 778 SDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVE-----APAGITFVQASAGGSHVVALSS 832
Query: 160 DNSLWGCGWNEYNQL 174
D +++ G N QL
Sbjct: 833 DGNIYTWGDNSAGQL 847
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP+ + F T I G LA + +G ++SWG GQLG ++ + PR++
Sbjct: 384 MPAGVKKF-----TWIKAGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVT 438
Query: 79 ALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE---GKLDLVVHD-PHPMSW 133
+G+ ++SA HS A DG LY+WG N+ Q+G + K D+ P P
Sbjct: 439 MPAGVTKFTKVSAEHRHSLALGSDGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVPTPAGV 498
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
++ +V+ G H+LA+ D +L+ G N+Y +L
Sbjct: 499 AQ--------FTEVSAGYSHSLAIGSDGNLYSWGQNKYGEL 531
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ + + G H +AL+ +G +++WG+ S GQLG + + +P +
Sbjct: 806 PHKVEAPAGITFVQASAGGSHVVALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADT 865
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
+ + +SAG H+ A G +Y WG N G++G P D +
Sbjct: 866 PADVTFTSVSAGQGHTVAVDTQGDVYTWGDNTHGELGRS-----TTSTPADKPGKADTPA 920
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCG 167
I + G H++A+ DD S++ G
Sbjct: 921 -GITFTQASAGESHSVAVSDDGSIYTWG 947
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP+ + F T ++ H LAL +G ++SWG QLG + +++P ++
Sbjct: 439 MPAGVTKF-----TKVSAEHRHSLALGSDGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVP 493
Query: 79 ALSGLG-VVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKLDLVVHDPHPMSWSE 135
+G+ ++SAG HS A DG LY+WG N G++G GK D P +++ E
Sbjct: 494 TPAGVAQFTEVSAGYSHSLAIGSDGNLYSWGQNKYGELGRPTSGKYD---SSPGMVAFPE 550
Query: 136 D 136
D
Sbjct: 551 D 551
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Query: 43 ALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDG 102
A+ +G ++ WG+ + +LG P D P + +G+ Q+S G H A DG
Sbjct: 182 AIASDGNLYRWGDNNY-KLGTPE---DEKRTPSLVNPPTGVHFTQVSTGYTHFLAIGSDG 237
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ--------NIKVVDVACGSRHT 154
LY+WG N G++G E +P D+Q + G H+
Sbjct: 238 NLYSWGNNADGELGRETVSTTPKDNPQ-------IDNQPKLVTPPAGVHFTQACAGKWHS 290
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCG 179
LAL D +L+ G N+Y +L G
Sbjct: 291 LALGSDGNLYSWGENKYGELGRDTG 315
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 62 GYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G S G + P R G+ + Q G HSAA DG LY WG N+ GQ+G +
Sbjct: 690 GPESGGQTVTLTPPPAR---GIRISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDTAD 746
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D HP S+ + V V+ G ++AL D SL+ G N QL
Sbjct: 747 K---PDSHP---SKAEAPAGVTFVHVSAGYGFSVALASDGSLYSWGDNSRGQL 793
>gi|294868608|ref|XP_002765605.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
gi|239865684|gb|EEQ98322.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
Length = 1287
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI-S 89
+ I+ G H A++ G++F+WG+ +GQLG ++G + P + L VQ+ S
Sbjct: 238 IRQISAGDAHACAISISGVLFTWGSNRKGQLGRENAGHREVL-PGPVSCLPPTKAVQMAS 296
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H+AA Q G +Y WG N GQ GV+ + ++ P + E + + VAC
Sbjct: 297 CGAQHTAAVVQGGQVYLWGDNAFGQCGVDAVEEPILPIPINLQSKEVWRT-------VAC 349
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G HTL L + L+GCG NE QL G
Sbjct: 350 GGHHTLFLDVNGQLFGCGSNEDGQLGTG 377
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
MP RM V +ACG D L L + G V+ GN S GQLG + T+ P+ +
Sbjct: 172 MPPRM-MVTPQEVCQVACGGDFTLLLLETGEVYGTGNNSVGQLG--TGNTEEITTPKPVL 228
Query: 79 ---ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE--GKLDLVVHDPHPMSW 133
G+ + QISAG H+ A + G L+ WG N GQ+G E G +++ P P+S
Sbjct: 229 NCGQTYGVPIRQISAGDAHACAISISGVLFTWGSNRKGQLGRENAGHREVL---PGPVSC 285
Query: 134 SEDFDSQNIKVVDVA-CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
K V +A CG++HT A+ ++ G N + Q CGV V
Sbjct: 286 LPP-----TKAVQMASCGAQHTAAVVQGGQVYLWGDNAFGQ----CGVDAV 327
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 19/187 (10%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEP 74
V P R+ + G + L +++ G ++ G +G + P +++ +P
Sbjct: 59 VVERPQRVCELDRRHPKSLCVGPESTLVVSESGRIYGGGLNEKGYITGPDGDDSESLFKP 118
Query: 75 REI--RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG-GQVGVEGKLDLVVHDPHPM 131
R + + L V ++ G H+ A T + WG +N GQVG G+ + P M
Sbjct: 119 RLVAYQELEQSFVTAVNCGDHHTVALTSNNLAIGWGRDNEFGQVG-HGQPSIKPMPPRMM 177
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
++ V VACG TL L + ++G G N QL G ++
Sbjct: 178 VTPQE-------VCQVACGGDFTLLLLETGEVYGTGNNSVGQLGTGN-------TEEITT 223
Query: 192 PEHVKNC 198
P+ V NC
Sbjct: 224 PKPVLNC 230
>gi|408501717|ref|YP_006865636.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
gi|408466541|gb|AFU72070.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
Length = 1828
Score = 77.0 bits (188), Expect = 6e-12, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 12/174 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV-- 85
D T ++ G+ LAL +G ++WG+ RGQLG ++G N P +++ SG G
Sbjct: 1381 DFAYTQVSAGYGFSLALGSDGNAYAWGDNGRGQLGKGAAG-GTNTTPVQVKKPSGAGTDF 1439
Query: 86 --VQISAGGWHSAARTQDGFLYAWG-WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
Q+SAGG+HS A +D YAWG +NGGQVG +G + + P P++ + S
Sbjct: 1440 AYTQVSAGGYHSLAVGKDHQAYAWGDRSNGGQVG-DG--NTTGNAPAPVAVNASATSPGF 1496
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
+V V+ G +H+L + + G+ + +L SQ T +SV VK
Sbjct: 1497 QVRQVSAGYQHSLIIGISGQTYAWGYGDSGRLGNNAKSSQA---TPVSVSSPVK 1547
Score = 69.7 bits (169), Expect = 9e-10, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L+ +T I+ G+ H +AL+ G +++WG+ GQLG +G + N P + + SG+
Sbjct: 321 LNATITAISAGYWHAMALSSSGTIYTWGDNEYGQLGNGHTGVNVNASPAAVSS-SGVTFT 379
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-----VHDPHPMSWSEDFDSQN 141
ISAG A G YAWG N GGQ+ + G +D V+ P + + +
Sbjct: 380 TISAGYDFQTALDSQGHAYAWGRNQGGQLSI-GTMDGTSSGSNVYTPSRIYGDSTGNPDS 438
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGW 168
D+ G H LAL + ++ G+
Sbjct: 439 TVYTDIDAGYLHVLALSNSGKVYYWGY 465
Score = 66.6 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 12/146 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR--EIRALSGLGVVQISAG 91
++ G DH LA+ +G V++WG+ S+G+LG S+ + N R E A+ G + +SAG
Sbjct: 223 VSAGHDHTLAVGSDGHVYAWGDNSKGELG-DSTTINKNTPVRITENEAIKGKTFISVSAG 281
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
S A DG +Y WG N+ G++G + V P+ + N + ++ G
Sbjct: 282 TTFSMALASDGTVYTWGDNSRGELGNGSTTNSSV----PVK-----ANLNATITAISAGY 332
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMG 177
H +AL +++ G NEY QL G
Sbjct: 333 WHAMALSSSGTIYTWGDNEYGQLGNG 358
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR--EIRALSGLGVVQISAGG 92
+ G H LA+ +G V++WGN + G LG + A R E A+ G + +SAG
Sbjct: 784 SAGRYHTLAVGSDGHVYAWGNQASGGLGNSKNSGTATTPVRITENDAIKGKIFIAVSAGD 843
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
+S A DG +Y WG N GQ+G G +P + N K+ ++ G
Sbjct: 844 AYSMALASDGTVYTWGNNGKGQLG-NGTTGSYSSEPVKAQ------TDNAKITAISAGRA 896
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
+ +AL D +++ G N QL +G
Sbjct: 897 YAMALASDGTVYTWGDNTQGQLGIG 921
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T I+ G + +AL +G V++WG+ ++GQLG D++ P ++ ALS + ISA
Sbjct: 888 ITAISAGRAYAMALASDGTVYTWGDNTQGQLGI--GNYDSHSTPTKVTALS--NITAISA 943
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV---VDV 147
G A G + WG N+ GQ+G G + P P + +D D+ + +
Sbjct: 944 GFTSGTALDSQGHAWTWGQNDKGQLG-NGAPN---RSPTP-TRVQDLDTGQPDTRFYIAI 998
Query: 148 ACGSRHTLALCDDNSLWGCG 167
+ G +H LAL D+ L+G G
Sbjct: 999 SAGYQHVLALDTDHDLYGWG 1018
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++ G +AL +G V++WG+ SRG+LG S+ T++++ ++A + ISAG W
Sbjct: 278 VSAGTTFSMALASDGTVYTWGDNSRGELGNGST-TNSSVP---VKANLNATITAISAGYW 333
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ A + G +Y WG N GQ+G V P +S S + ++ G
Sbjct: 334 HAMALSSSGTIYTWGDNEYGQLGNGHTGVNVNASPAAVS------SSGVTFTTISAGYDF 387
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
AL + G N+ QLS+G
Sbjct: 388 QTALDSQGHAYAWGRNQGGQLSIG 411
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV----VQIS 89
++ G +H LA+ +G ++WG+ S GQLG S D++ P +++ S G Q+S
Sbjct: 1331 VSTGKNHSLAVGSDGNAYAWGDNSTGQLGNGSK--DSSKTPVQVKKPSDAGTDFAYTQVS 1388
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
AG S A DG YAWG N GQ+G G V P DF
Sbjct: 1389 AGYGFSLALGSDGNAYAWGDNGRGQLGKGAAGGTNTTPVQVKKPSGAGTDF-----AYTQ 1443
Query: 147 VACGSRHTLALCDDNSLWGCG 167
V+ G H+LA+ D+ + G
Sbjct: 1444 VSAGGYHSLAVGKDHQAYAWG 1464
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS----GLGVVQIS 89
I+ G+ H LAL + ++ WG+G+ S TD N+ R A+S + + IS
Sbjct: 998 ISAGYQHVLALDTDHDLYGWGSGTA-----IGSTTDTNVSKRGSTAISFGDEPVNITAIS 1052
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A G +Y WG GQ+G G D +P + + +Q++K V+
Sbjct: 1053 AGDDGSEAIDDSGKIYTWGKEAYGQLG-NGVYDNTAWQINPKTITL---AQSVKACTVST 1108
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
S H A+ D L+ G++ YNQL +S
Sbjct: 1109 SSHHQTAIGSDGLLYTWGYSYYNQLGRTGAIS 1140
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN----MEPREIRALS-GLGV 85
V ++ G+ H L + G ++WG G G+LG + + A P + S G
Sbjct: 1498 VRQVSAGYQHSLIIGISGQTYAWGYGDSGRLGNNAKSSQATPVSVSSPVKYEDGSIGFFA 1557
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
Q+SAGG HS A +DG YAWG N G++G D + + + D S K
Sbjct: 1558 TQVSAGGSHSLAIGRDGKAYAWGANTDGRLGTGDTNDAAIPT---LVANPDGGSDGFKPT 1614
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+++ G + D ++ G N +N L
Sbjct: 1615 EISAGGWFCAGIDDKGKIYTWGSNGHNAL 1643
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++ G + +AL +G V++WGN +GQLG ++G+ ++ EP + + + ISAG
Sbjct: 839 VSAGDAYSMALASDGTVYTWGNNGKGQLGNGTTGSYSS-EPVKAQT-DNAKITAISAGRA 896
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
++ A DG +Y WG N GQ+G+ +D H S + ++ G
Sbjct: 897 YAMALASDGTVYTWGDNTQGQLGIGN------YDSHSTPTKVTALSN---ITAISAGFTS 947
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
AL W G N+ QL G
Sbjct: 948 GTALDSQGHAWTWGQNDKGQLGNG 971
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 15/175 (8%)
Query: 24 DHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA--NMEPREIRALS 81
D + T ++ G H LA+ ++G ++WG + G+LG + A +
Sbjct: 1550 DGSIGFFATQVSAGGSHSLAIGRDGKAYAWGANTDGRLGTGDTNDAAIPTLVANPDGGSD 1609
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNG---GQVGVEGKLDLVVHDPHPMSWSEDFD 138
G +ISAGGW A G +Y WG N G V + G + S S
Sbjct: 1610 GFKPTEISAGGWFCAGIDDKGKIYTWGSNGHNALGNVSISGSI----------SESPVLV 1659
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
S++ ++ G R L + ++ +G G N QL + V T + P+
Sbjct: 1660 SKDGSTTQISAGERQVLVIDSNDMAYGWGDNSSRQLGTNLDSTSVKAATLVCPPQ 1714
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 62 GYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G + G+ + P + R G+ Q+SAG H+ A DG +YAWG N+ G++G
Sbjct: 200 GDDTGGSAITLTPPKPR---GVRFAQVSAGHDHTLAVGSDGHVYAWGDNSKGELGDS--- 253
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS 181
++ P+ +E+ + + V+ G+ ++AL D +++ G N +L G
Sbjct: 254 -TTINKNTPVRITENEAIKGKTFISVSAGTTFSMALASDGTVYTWGDNSRGELGNGS--- 309
Query: 182 QVSVMTRLSVPEHVK-NCPIVKLFAEHWNSARLS 214
T SVP N I + A +W++ LS
Sbjct: 310 ----TTNSSVPVKANLNATITAISAGYWHAMALS 339
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 91/237 (38%), Gaps = 48/237 (20%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANME------PREIRALSG 82
V TDI G+ H LAL+ G V+ WG YP + G D N + P + +G
Sbjct: 440 VYTDIDAGYLHVLALSNSGKVYYWG--------YPLTKGDDPNADSVHSFYPSLVSLPTG 491
Query: 83 LGV-VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
V SAG + SA G LY +G N+ GQ+G +G P
Sbjct: 492 AATPVSASAGDYSSAVVDSAGSLYMFGSNSSGQLG-DG-----TTKPKSTMTEVSLTGVT 545
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT-------------- 187
+ DV RH+LA+ D + G + +L G Q T
Sbjct: 546 VAAFDVC---RHSLAIGSDGLPYSWGEAKSGKLGQGSKGPQSGSQTKPAAVGPPQIDLAK 602
Query: 188 ----RLSVPEHVKNCPIVKLFA--EHWNSA---RLSVPEHAKDSSIVKLFAGHWNSG 235
R V + N PI + A + W+S ++ P H ++ +++ G W+ G
Sbjct: 603 VTFGRTDVAKTDTNSPISRTSAGDDTWSSNTPWTVTTPHHTYGTTKIRINDGQWSIG 659
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA-NMEPREIRALSGLGVVQIS 89
+T I+ G D A+ G +++WG + GQLG A + P+ I + +S
Sbjct: 1048 ITAISAGDDGSEAIDDSGKIYTWGKEAYGQLGNGVYDNTAWQINPKTITLAQSVKACTVS 1107
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
H A DG LY WG++ Q+G G + +
Sbjct: 1108 TSSHHQTAIGSDGLLYTWGYSYYNQLGRTGAISV 1141
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 62 GYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G + G+ + P + RA+ Q SAG +H+ A DG +YAWG G +G
Sbjct: 760 GDDTGGSKITLTPPKPRAVR---FAQASAGRYHTLAVGSDGHVYAWGNQASGGLGNSKNS 816
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P+ +E+ + + V+ G +++AL D +++ G N QL G
Sbjct: 817 GTAT---TPVRITENDAIKGKIFIAVSAGDAYSMALASDGTVYTWGNNGKGQLGNG 869
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK--LDLVVHDPHPMSWSEDFDS 139
G+ Q+S G HS A DG YAWG N+ GQ+G K V P DF
Sbjct: 1325 GIRFAQVSTGKNHSLAVGSDGNAYAWGDNSTGQLGNGSKDSSKTPVQVKKPSDAGTDF-- 1382
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V+ G +LAL D + + G N QL G
Sbjct: 1383 ---AYTQVSAGYGFSLALGSDGNAYAWGDNGRGQLGKG 1417
>gi|313221384|emb|CBY32137.1| unnamed protein product [Oikopleura dioica]
Length = 1586
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 23/167 (13%)
Query: 19 MPSRMDHFLDLVVTDIA--CGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
+PS + +VT ++ G D H LA+T+ G +F+WG+G G+LG+ +S + PR
Sbjct: 805 VPSLVSALQGFIVTHLSSSVGSDGHTLAITESGELFTWGDGDYGKLGHGNS--ERQRRPR 862
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG----VEGKLDLVVHDPHPM 131
+ L G VV G H+A T G+LY +G+ + G++G K +VH
Sbjct: 863 LVETLVGETVVDGCCGYKHTAVVTATGYLYTFGYGDYGRLGHGNTTSKKTPTLVH----- 917
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMG 177
D QNI V V+CG HTLAL D ++W G ++ +L +G
Sbjct: 918 ------DCQNI--VSVSCGLNHTLALSRDGMTVWAFGDGDFGKLGLG 956
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 31 VTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+ ++CG +H LAL+++G+ V+++G+G G+LG T A P +I AL +G+ +
Sbjct: 922 IVSVSCGLNHTLALSRDGMTVWAFGDGDFGKLGL--GNTLAVQSPNKIAALENVGIKSVH 979
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G S +G +Y G + +G G+ + ++ +V ++C
Sbjct: 980 CGHQWSVFLAINGDVYVSGQDAFNGIGGPGQTVI----------PTKLETIKKRVFQISC 1029
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
G+ +TLAL +D ++W G N Q +GCG
Sbjct: 1030 GAEYTLALDEDGNVWSWGNNSDGQ--VGCG 1057
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 14/167 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P R++ F ++ I G + + G V S G GS G+LG+ +S D P +
Sbjct: 755 LPRRLEAFDNM--QTIELGLNCTFLCSASGAVTSTGEGSYGRLGHGNS--DDLSVPSLVS 810
Query: 79 ALSGLGVVQISA---GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
AL G V +S+ H+ A T+ G L+ WG + G++G G + P E
Sbjct: 811 ALQGFIVTHLSSSVGSDGHTLAITESGELFTWGDGDYGKLG-HGNSE---RQRRP-RLVE 865
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
+ VVD CG +HT + L+ G+ +Y +L G S+
Sbjct: 866 TLVGET--VVDGCCGYKHTAVVTATGYLYTFGYGDYGRLGHGNTTSK 910
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P++++ V I+CG ++ LAL ++G V+SWGN S GQ+G + EP +
Sbjct: 1013 IPTKLETIKKRVF-QISCGAEYTLALDEDGNVWSWGNNSDGQVG--CGHFNKVHEP--LL 1067
Query: 79 ALSGLGVVQISAGGWHSAA 97
L+G + Q+ AG HS A
Sbjct: 1068 TLTGHRIKQVRAGKTHSIA 1086
>gi|167518173|ref|XP_001743427.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778526|gb|EDQ92141.1| predicted protein [Monosiga brevicollis MX1]
Length = 1024
Score = 77.0 bits (188), Expect = 6e-12, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPREIRALSGLGVVQIS 89
+ +A G D L L G V++ G G RGQLG + + + P+ IR+L + +V +S
Sbjct: 84 IRQVAAGEDFSLMLDDRGKVYAVGAGERGQLGCGRQTSEEGHRVPKIIRSLHDVPIVALS 143
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GG H+ A + ++AWG N GQ+G G + + P P+ + VV +A
Sbjct: 144 VGGRHALALSASSIVFAWGENANGQLG-NGHF-VPSYQPTPIP-----ELNGRGVVGLAA 196
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G +H+LAL + L+ G NE+ QL +G
Sbjct: 197 GRQHSLALTAASELYAFGANEHGQLGVG 224
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +A G H LALT ++++G GQLG T + P +RA G+V++SA
Sbjct: 191 VVGLAAGRQHSLALTAASELYAFGANEHGQLGV--GDTKPRLRPELVRAALRKGLVKVSA 248
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HS AR+ G +AWG N GQ GV D ++ + D ++ + D+A G
Sbjct: 249 GDFHSLARSATGHAFAWGGNQWGQCGVGDDADAIL-----LPREIDSVQEHGHIADIATG 303
Query: 151 SRHTLAL 157
RH++ L
Sbjct: 304 KRHSVLL 310
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + D+ + ++ G H LAL+ IVF+WG + GQLG + + +P I
Sbjct: 127 VPKIIRSLHDVPIVALSVGGRHALALSASSIVFAWGENANGQLG--NGHFVPSYQPTPIP 184
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L+G GVV ++AG HS A T LYA+G N GQ+G V D P E
Sbjct: 185 ELNGRGVVGLAAGRQHSLALTAASELYAFGANEHGQLG--------VGDTKPRLRPELVR 236
Query: 139 SQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL-SVPEH 194
+ K +V V+ G H+LA + G N++ Q +G + + + SV EH
Sbjct: 237 AALRKGLVKVSAGDFHSLARSATGHAFAWGGNQWGQCGVGDDADAILLPREIDSVQEH 294
Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
G+ +AG +HS T DG +Y+ G N+ Q+G G + E + +I+
Sbjct: 33 GLRAAAAGAYHSLLVTTDGLVYSAGKNDHRQLGRSGPAGI-------FKRIEAIEVASIR 85
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPI 200
VA G +L L D ++ G E QL GCG R VP+ ++ + PI
Sbjct: 86 --QVAAGEDFSLMLDDRGKVYAVGAGERGQL--GCGRQTSEEGHR--VPKIIRSLHDVPI 139
Query: 201 VKL 203
V L
Sbjct: 140 VAL 142
>gi|307186651|gb|EFN72134.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 815
Score = 77.0 bits (188), Expect = 6e-12, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+TDIAC CLALT G +++WGN + Y SS D P ++ ++ I+
Sbjct: 42 ITDIACNNYICLALTDSGKIYTWGN-----IKYSSSYYDIVSTPYQV----NFDIIHIAC 92
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS------QNIKV 144
G + A +DG LY+WG NN GQ+G+ S E++D ++ +
Sbjct: 93 GSSFAMALNKDGKLYSWGLNNYGQLGIN-------------STKENYDPCLITSLIHVTI 139
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V V CG H+LAL + ++ G N QL G
Sbjct: 140 VKVVCGLEHSLALNSEGKIYSWGSNSKGQLGHG 172
Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 7/134 (5%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IACG +ALT +G ++SWG + GQLG S + ++ P I +L + + +I G
Sbjct: 474 IACGMSFVMALTNDGKLYSWGTNTYGQLGISS---ENDLYPCLITSLENVHIDKIVCGSE 530
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A T G +Y+WG N+ GQ+G + + V +P + W+ + + I + D+A +
Sbjct: 531 HSLALTSKGHIYSWGSNHEGQLGYDRECS-VKKEPTKLKWTANGKTMGI-ISDIAAQHKV 588
Query: 154 TLALCDDNS--LWG 165
+ A+ S +WG
Sbjct: 589 SAAVNKLGSVYVWG 602
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 23/172 (13%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
D+ G L L+ + +P++MD + DIA + LALT G ++ WG+
Sbjct: 404 DNCRLGKLDSLATTY-LPAKMDSLRGKRIIDIASNNYNSLALTDSGKIYVWGS------- 455
Query: 63 YPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD 122
N + + + QI+ G A T DG LY+WG N GQ+G+ + D
Sbjct: 456 -------VNFTKKSLPDQCQVNPCQIACGMSFVMALTNDGKLYSWGTNTYGQLGISSEND 508
Query: 123 LVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
L +P + +N+ + + CGS H+LAL ++ G N QL
Sbjct: 509 L-----YPCLITS---LENVHIDKIVCGSEHSLALTSKGHIYSWGSNHEGQL 552
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + + + + CG +H LAL EG ++SWG+ S+GQLG+ T+ ++P + A
Sbjct: 128 PCLITSLIHVTIVKVVCGLEHSLALNSEGKIYSWGSNSKGQLGH-GKKTEREIKPVMLCA 186
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ I+A S A + G +Y WG
Sbjct: 187 PIMGKISDIAAQDDKSVAINKIGHVYVWG 215
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G L + S+ P + ++ + I CG +H LALT +G ++SWG+ GQLGY
Sbjct: 499 GQLGISSENDLYPCLITSLENVHIDKIVCGSEHSLALTSKGHIYSWGSNHEGQLGYDREC 558
Query: 68 TDANMEPREIRALSG---LGVVQ-ISAGGWHSAARTQDGFLYAWG 108
+ EP +++ + +G++ I+A SAA + G +Y WG
Sbjct: 559 S-VKKEPTKLKWTANGKTMGIISDIAAQHKVSAAVNKLGSVYVWG 602
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 19/132 (14%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANM-EPREIRALS----GLGVVQISAGGWHSAARTQDGFL 104
V+SWG+ +LG P + P +I +LS G + I+ + A T G +
Sbjct: 2 VYSWGSNENCRLGRPELEVKTKIYMPAQINSLSTRLTGEHITDIACNNYICLALTDSGKI 61
Query: 105 YAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
Y W G + +V P+ + N ++ +ACGS +AL D L+
Sbjct: 62 YTW-----GNIKYSSSYYDIVSTPYQV---------NFDIIHIACGSSFAMALNKDGKLY 107
Query: 165 GCGWNEYNQLSM 176
G N Y QL +
Sbjct: 108 SWGLNNYGQLGI 119
>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
niloticus]
Length = 531
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRA-LSG 82
+ L+ VT++ACG H +ALT G V++WG + GQ+G SG+ AN PR + + L
Sbjct: 124 NLLNKKVTEVACGSHHSMALTDTGEVYAWGYNNCGQVG---SGSTANQPTPRRVSSCLQN 180
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
V I G S A +G +Y WG+N GQ+G+ ++ + ++ Q +
Sbjct: 181 KVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLG-------NNGNQVTPCRLVGLQGL 233
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
V + G H++AL D+ L+ G N Y QL G +Q+S + L+ E +
Sbjct: 234 CVQQIVSGYAHSMALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQILTEKERI 286
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Query: 20 PSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ L + V I CG LA+ G V+ WG GQLG ++G + P +
Sbjct: 171 PRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQ--VTPCRLV 228
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L GL V QI +G HS A T +G LYAWG N GQ+G K + +S +
Sbjct: 229 GLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLGTGNK-------SNQLSPVQILT 281
Query: 139 SQNIKVVDVACGSRHTLA 156
+ V AC S HT A
Sbjct: 282 EKERIVEIAACHSTHTSA 299
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L AC F + + +T + VF +G LG + + + + P+++ LSG
Sbjct: 17 ELASIRKACVFGSSANEAIYITNDDEVFVFGLNCSNCLG--TGDSLSTIVPKKLDFLSGR 74
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
VV +S G G H T+DG L+AWG N Q+G G + V P+ S + N
Sbjct: 75 KVVSLSYGSGPHILLATEDGELFAWGHNGYSQLG-NGTTNQGV---APVLVSANL--LNK 128
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
KV +VACGS H++AL D ++ G+N Q+ G +Q P V +C
Sbjct: 129 KVTEVACGSHHSMALTDTGEVYAWGYNNCGQVGSGSTANQ-------PTPRRVSSC 177
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ L V I G+ H +ALT EG++++WG + GQLG +G +N + P +I
Sbjct: 224 PCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLG---TGNKSNQLSPVQIL 280
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+V+I+A SAA+TQ G +Y WG G +
Sbjct: 281 T-EKERIVEIAACHSTHTSAAKTQSGQVYMWGQCRGQSI 318
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++ G DH ALT +G ++ WG+GS GQLG + TD+ P+E++ S V +S G +
Sbjct: 144 LSAGTDHSAALTTDGTLYMWGSGSEGQLGLGN--TDSVETPKELKFHS--SVSWVSCGYY 199
Query: 94 HSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+A T DG LY +G G++G+ E +L+ H S +E K+ VACG
Sbjct: 200 HTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITE-------KIKLVACGGA 252
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS-VPEH 194
HT + D +L+ G + QL G + Q+S+ +++ + EH
Sbjct: 253 HTAVISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEH 295
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 83/173 (47%), Gaps = 18/173 (10%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG H + T+ G ++S+G GS GQLG + P+ I L +SAG
Sbjct: 93 VACGRSHTIVCTKAGRLYSFGAGSDGQLG--TGDAQCATSPQLIN-LPEQKYKLLSAGTD 149
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HSAA T DG LY WG + GQ+G+ G D V P + + + V V+CG H
Sbjct: 150 HSAALTTDGTLYMWGSGSEGQLGL-GNTD-SVETPKELKF-------HSSVSWVSCGYYH 200
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN-CPIVKLFA 205
T + DD L+ G E+ +L + + + P+HV++ +KL A
Sbjct: 201 TAIVTDDGKLYTFGEKEFGKLGL-----TEDQLEDTTTPKHVESITEKIKLVA 248
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+CG +H +T+ G ++++G+ GQLG +P +++L GV ++ G
Sbjct: 41 ISCGDEHSAIITESGRLYTFGSNDWGQLGLGH--MKPTTKPGCVKSLKQEGVNLVACGRS 98
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ T+ G LY++G + GQ+G G P ++ E Q K+ ++ G+ H
Sbjct: 99 HTIVCTKAGRLYSFGAGSDGQLGT-GDAQCAT-SPQLINLPE----QKYKL--LSAGTDH 150
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
+ AL D +L+ G QL +G
Sbjct: 151 SAALTTDGTLYMWGSGSEGQLGLG 174
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++CG+ H +T +G ++++G G+LG + P+ + +++ + ++ GG
Sbjct: 194 VSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESIT-EKIKLVACGGA 252
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+A + G LY +G GQ+G G L + P ++ + K V+CG H
Sbjct: 253 HTAVISDVGNLYTFGDGMHGQLG-NGPSLLQLSLPQKVARLSEH-----KCKYVSCGDNH 306
Query: 154 TLALCDDNSLWGCGWNEYNQLSM 176
T + + +++ G + +L +
Sbjct: 307 TAVITEKGAMYTFGDGRHGKLGI 329
Score = 36.6 bits (83), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
+ IS G HSA T+ G LY +G N+ GQ+G+ G + S ++ V
Sbjct: 38 AMHISCGDEHSAIITESGRLYTFGSNDWGQLGL-GHMKPTTKPGCVKSLKQE------GV 90
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL-SVPEH 194
VACG HT+ L+ G QL G G +Q + +L ++PE
Sbjct: 91 NLVACGRSHTIVCTKAGRLYSFGAGSDGQL--GTGDAQCATSPQLINLPEQ 139
>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 388
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 44/210 (20%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
P+++ +F + V +ACG H L L V +G+G RGQLG+ S GT + P
Sbjct: 140 LRTPAKVSYFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRGQLGFTSDGTKSVNLPCV 199
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAW---------------------------GW 109
+ L + V +ISA G HSAA + DG ++W GW
Sbjct: 200 VSGLKDVEVTRISANGDHSAAISADGQFFSWGRGFCAGPDVQTPQCLPSSLSFRKVAVGW 259
Query: 110 NNGGQVGVEGKL----DLVVHDPHP-----------MSWSEDFDSQNIKVVDVACGSRHT 154
N+ + V+G++ + + P ++ DFD +KV+ +A G+ H+
Sbjct: 260 NHALLLTVDGEVFKLGNTLNKQPEKQQLQIDSSEALLAKVSDFD--GVKVLQIAAGAEHS 317
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
A+ ++ + GW E+ QL +G Q S
Sbjct: 318 AAVTENGKVKTWGWGEHGQLGLGNTNDQTS 347
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 15/187 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
++ +ACG H +ALT +G VF+WG GS GQLG+ G N+ P+ + G + Q +
Sbjct: 50 ISMLACGGAHVIALTSDGKVFTWGRGSSGQLGH---GDILNITLPKLVSFFDGYVITQAA 106
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG HS + G L+ G + GQ+G + L P +S+ F ++++K+ VAC
Sbjct: 107 AGWSHSGFVSDSGCLFTCGNGSFGQLGHGDNMSL--RTPAKVSY---FSNESVKM--VAC 159
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGC-GVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
G RH+L L N + G G + QL G V++ +S +K+ + ++ A
Sbjct: 160 GMRHSLVLLAGNQVCGFGSGKRGQLGFTSDGTKSVNLPCVVS---GLKDVEVTRISANGD 216
Query: 209 NSARLSV 215
+SA +S
Sbjct: 217 HSAAISA 223
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP-REIRALSGLGVVQ 87
L +A G++H L LT +G VF GN Q D++ ++ G+ V+Q
Sbjct: 250 LSFRKVAVGWNHALLLTVDGEVFKLGNTLNKQPEKQQLQIDSSEALLAKVSDFDGVKVLQ 309
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS-WSEDFDSQNIKVVD 146
I+AG HSAA T++G + WGW GQ+G+ D P +S S D ++ IKV
Sbjct: 310 IAAGAEHSAAVTENGKVKTWGWGEHGQLGLGNTNDQT--SPQLVSVGSIDLRTKEIKVY- 366
Query: 147 VACGSRHTLAL 157
CGS T A+
Sbjct: 367 --CGSGFTYAV 375
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
+E V+SWG G+ GQLG ++ + P+ + S + ++ GG H A T DG ++
Sbjct: 13 EEQQVWSWGAGTDGQLG--TAKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSDGKVF 70
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
WG + GQ+G L++ + P +S+ + + + A G H+ + D L+
Sbjct: 71 TWGRGSSGQLGHGDILNITL--PKLVSFFDGY-----VITQAAAGWSHSGFVSDSGCLFT 123
Query: 166 CGWNEYNQLSMG 177
CG + QL G
Sbjct: 124 CGNGSFGQLGHG 135
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAA--TRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGA------CLGCGSSEATAL-RPKLIEELAATRIV 668
>gi|301118074|ref|XP_002906765.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108114|gb|EEY66166.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 330
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIA G+ H LA+T+ G VF+WG G RGQLG+ + DA P+E+ AL G + ++ A
Sbjct: 112 IVDIAAGYQHGLAVTKNGTVFTWGKGERGQLGFGTGNADA---PQELIALKGKKIAKVGA 168
Query: 91 GGWHSAARTQDGFLYAWG--WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G HS A + DG L+ WG N G+ G D + P + S+ V +
Sbjct: 169 GFNHSCAVSDDGELFLWGKLLNPKGKTETNG--DQIT--PRLVRTSD-------AVKLLK 217
Query: 149 CGSRHTLALCDDNSLWGCG 167
C HT + D +W G
Sbjct: 218 CSQFHTTFITADEKIWLAG 236
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 12/135 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I C LT+ G +F+ G S GQ G G + P + + G +V I+A
Sbjct: 60 VKKIVCSTALTFLLTESGKLFTLGANSYGQCGIGEEGVSVQL-PTHVN-IDGDEIVDIAA 117
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H A T++G ++ WG GQ+G G D + E + K+ V
Sbjct: 118 GYQHGLAVTKNGTVFTWGKGERGQLGFGTGNAD---------APQELIALKGKKIAKVGA 168
Query: 150 GSRHTLALCDDNSLW 164
G H+ A+ DD L+
Sbjct: 169 GFNHSCAVSDDGELF 183
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
+EP + G V +I + T+ G L+ G N+ GQ G+ G+ + V P
Sbjct: 46 TLEPALVELPEGECVKKIVCSTALTFLLTESGKLFTLGANSYGQCGI-GEEGVSVQLPTH 104
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
++ D ++VD+A G +H LA+ + +++ G E QL G G
Sbjct: 105 VNIDGD------EIVDIAAGYQHGLAVTKNGTVFTWGKGERGQLGFGTG 147
>gi|440803366|gb|ELR24272.1| BTB/POZ domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 908
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 21/137 (15%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG H +ALT G V++WGNG GQLG+ + P+ ++A G+ V+ I+
Sbjct: 269 VVQIACGESHSVALTDAGTVYTWGNGLSGQLGH--CNESSVNRPQLVQACLGMKVLYIAC 326
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +H+ A G + WG N Q+G+EG+ ++ VACG
Sbjct: 327 GSYHTVALIDTGDVVVWGSNEESQLGIEGE-------------------SGQGIIAVACG 367
Query: 151 SRHTLALCDDNSLWGCG 167
+ T+AL D ++ CG
Sbjct: 368 TGLTVALSADGRVFACG 384
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 81/188 (43%), Gaps = 25/188 (13%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G L ++ P ++ L V +A G H L NG GQLG S
Sbjct: 206 GQLFFNARCVEQPRLVESLQGLDVVQVATGDRHSL------------NGD-GQLGLGDSV 252
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
P + L G VVQI+ G HS A T G +Y WG GQ+G + V+
Sbjct: 253 LHGP-GPHPVIGLDGFKVVQIACGESHSVALTDAGTVYTWGNGLSGQLGHCNESS--VNR 309
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM----GCGVSQV 183
P + +KV+ +ACGS HT+AL D + G NE +QL + G G+ V
Sbjct: 310 PQLVQA-----CLGMKVLYIACGSYHTVALIDTGDVVVWGSNEESQLGIEGESGQGIIAV 364
Query: 184 SVMTRLSV 191
+ T L+V
Sbjct: 365 ACGTGLTV 372
>gi|294935296|ref|XP_002781372.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
gi|239891953|gb|EER13167.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
Length = 1285
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI-S 89
+ I+ G H A++ G++F+WG+ +GQLG ++G + P + L VQ+ S
Sbjct: 238 IRQISAGDAHACAISISGVLFTWGSNRKGQLGRENAGHREVL-PGPVSCLPPTKAVQMAS 296
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H+AA Q G +Y WG N GQ GV+ + ++ P + E + + VAC
Sbjct: 297 CGAQHTAAVVQGGQVYLWGDNASGQCGVDVVEEPILPIPINLQSKEVWRT-------VAC 349
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G HTL L + L+GCG NE QL G
Sbjct: 350 GGHHTLFLDVNGQLFGCGSNEDGQLGTG 377
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 19/187 (10%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEP 74
V P R+ + G + L +++ G ++ G +G + P +++ +P
Sbjct: 59 VVERPQRVCELDRRHPKSLCVGPESTLVVSESGRIYGGGLNEKGYITGPDGDDSESLFKP 118
Query: 75 REI--RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG-GQVGVEGKLDLVVHDPHPM 131
R + + L V ++ G H+ A T + WG +N GQVG G+ + P M
Sbjct: 119 RLVAYQELEQSFVTAVNCGDHHTVALTSNNLAIGWGRDNEFGQVG-HGQPSIKPMPPRMM 177
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
++ V VACG TL L + ++G G N QL G ++
Sbjct: 178 VTPQE-------VCQVACGGDFTLLLLETGEVYGTGNNSVGQLGTGN-------TEEITT 223
Query: 192 PEHVKNC 198
P+ V NC
Sbjct: 224 PKAVLNC 230
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 8/145 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSR-GQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VT + CG H +ALT + WG + GQ+G+ M PR + ++ V Q++
Sbjct: 131 VTAVNCGDHHTVALTSNNLAIGWGRDNEFGQVGHGQPSIKP-MPPRMM--VTPQEVCQVA 187
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GG + + G +Y G N+ GQ+G ++ P + + + + ++
Sbjct: 188 CGGDFTLLLLETGEVYGTGNNSVGQLGTGNTEEITT----PKAVLNCGQTYGVPIRQISA 243
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQL 174
G H A+ L+ G N QL
Sbjct: 244 GDAHACAISISGVLFTWGSNRKGQL 268
>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
Length = 228
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 91/183 (49%), Gaps = 21/183 (11%)
Query: 2 CDHLASGPLKMLSQVFHMPSRMDHFL----DLVVTDIACGFDHCLALTQEGIVFSWGNGS 57
C LK + VF P + FL +L+ +ACG H LALT G V+S+G G+
Sbjct: 6 CGEFGQLGLKDAAGVFTSP--LPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGT 63
Query: 58 RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG- 116
G LG+ + T++ P + +L GLG+VQI+ G HS A T +G L++WG GQ+G
Sbjct: 64 FGALGHGT--TESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGC 121
Query: 117 --VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
VE L P P++ D + V CG+ +T+A+ D L+ G + Q
Sbjct: 122 GSVENHL-----QPVPVTALSDR-----LLTQVVCGADYTMAIDSDGQLFSWGHGHWGQT 171
Query: 175 SMG 177
G
Sbjct: 172 GHG 174
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +D L + IACG +H ALT EG +FSWG G GQLG S + +++P + A
Sbjct: 78 PVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGS--VENHLQPVPVTA 135
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LS + Q+ G ++ A DG L++WG + GQ G + +++V P + E
Sbjct: 136 LSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILV--PKLVCSLE---- 189
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
N +V + G+RH +AL ++ G NE Q+
Sbjct: 190 -NDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 26/158 (16%)
Query: 50 VFSWGNGSRGQLGYP-SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ SWG G GQLG ++G + PR +R L V+++ G H+ A T G +Y++G
Sbjct: 1 LVSWGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFG 60
Query: 109 WNNGGQVG---VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
G +G E V+ D W + +V +ACG H+ AL + L+
Sbjct: 61 QGTFGALGHGTTESCSSPVIVDS---LW-------GLGIVQIACGDNHSCALTVEGQLFS 110
Query: 166 CGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
G +Y QL GCG SV H++ P+ L
Sbjct: 111 WGRGKYGQL--GCG----------SVENHLQPVPVTAL 136
>gi|125972780|ref|YP_001036690.1| dockerin type I cellulosome protein [Clostridium thermocellum ATCC
27405]
gi|256004969|ref|ZP_05429941.1| cellulosome protein dockerin type I [Clostridium thermocellum DSM
2360]
gi|281416977|ref|ZP_06247997.1| Dockerin type 1 [Clostridium thermocellum JW20]
gi|385779304|ref|YP_005688469.1| Dockerin type 1 [Clostridium thermocellum DSM 1313]
gi|419721626|ref|ZP_14248784.1| Dockerin type 1 protein [Clostridium thermocellum AD2]
gi|419725441|ref|ZP_14252484.1| Dockerin type 1 protein [Clostridium thermocellum YS]
gi|125713005|gb|ABN51497.1| Dockerin type 1 [Clostridium thermocellum ATCC 27405]
gi|255991038|gb|EEU01148.1| cellulosome protein dockerin type I [Clostridium thermocellum DSM
2360]
gi|281408379|gb|EFB38637.1| Dockerin type 1 [Clostridium thermocellum JW20]
gi|316940984|gb|ADU75018.1| Dockerin type 1 [Clostridium thermocellum DSM 1313]
gi|380771190|gb|EIC05067.1| Dockerin type 1 protein [Clostridium thermocellum YS]
gi|380782322|gb|EIC11962.1| Dockerin type 1 protein [Clostridium thermocellum AD2]
Length = 469
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 92/193 (47%), Gaps = 25/193 (12%)
Query: 9 PLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----Y 63
P+ S +MP + F D+ + DI G H +AL ++G V++WG GQLG +
Sbjct: 244 PINTSSDAEYMPWEIKGFGDIKMADIGTG--HIVALREDGTVWTWGENVWGQLGNGWQQH 301
Query: 64 PSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
+ T EP + + LS +V I+AG HS A DG ++ WG N G++G G
Sbjct: 302 HNIHTYIYFEPNQAKNLSD--IVSIAAGDAHSVALKSDGTVWTWGSNFNGELG-NGTTTY 358
Query: 124 VVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++ +P + ED +V + G HT+AL D ++W G N Y QL G
Sbjct: 359 IL-EPKKVEGLED-------IVAIDAGIGHTVALKADGTVWVWGKNSYGQLGNGT----- 405
Query: 184 SVMTRLSVPEHVK 196
R +VP V+
Sbjct: 406 --TMRSTVPIQVE 416
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ ++ P++ + D+V IA G H +AL +G V++WG+ G+LG + T +E
Sbjct: 306 TYIYFEPNQAKNLSDIV--SIAAGDAHSVALKSDGTVWTWGSNFNGELG--NGTTTYILE 361
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+++ L +V I AG H+ A DG ++ WG N+ GQ+G + V P +
Sbjct: 362 PKKVEGLED--IVAIDAGIGHTVALKADGTVWVWGKNSYGQLGNGTTMRSTV--PIQVEG 417
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
E +V + G T+A +D ++W G N++ QL G
Sbjct: 418 LEG-------IVAIQAGMECTIAYKNDGTVWAWGKNDFGQLGDGT 455
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 12 MLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
ML V P + D V+ GF H + L ++G V+ GN +GQLG P A
Sbjct: 93 MLKAVEKFPGEASNNPDAVI-QFESGFAHSVLLKKDGTVWVLGNNGKGQLGLPE--VSAV 149
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
EP I LS G+ ++AG H+ A +DG L+AWG N Q+ ++ + DP
Sbjct: 150 NEPVMINGLS--GIKSVAAGREHTLALQEDGTLWAWGNNYSLQL-----IEYMERDPDT- 201
Query: 132 SWSEDFDSQNIKVVD------VACGSRHTLALCDDNSLW 164
E F S IKV VA TL + +D ++W
Sbjct: 202 --KERFTSIPIKVETHSDIKYVAAKFSRTLIVKNDGTVW 238
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK- 143
V+Q +G HS +DG ++ G N GQ+G+ P + +E +
Sbjct: 111 VIQFESGFAHSVLLKKDGTVWVLGNNGKGQLGL----------PEVSAVNEPVMINGLSG 160
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ VA G HTLAL +D +LW G N QL
Sbjct: 161 IKSVAAGREHTLALQEDGTLWAWGNNYSLQL 191
>gi|323452281|gb|EGB08155.1| hypothetical protein AURANDRAFT_26269, partial [Aureococcus
anophagefferens]
Length = 369
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 19 MPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGY------PSSGTDA 70
P +D F V +I+ G H +AL V++WG+ GQLGY P +G A
Sbjct: 101 TPRPLDAFGGRAVREISVGPGGYHTVALVSPADVYTWGHNRVGQLGYTNNDVVPRNGEGA 160
Query: 71 NM--EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
+ PR + ++SGL V ++ AG H+A T +G Y G N GQ+G+ G + H+
Sbjct: 161 HFVPRPRRVDSVSGLRVRRVVAGWGHTALLTAEGAAYVCGRNFQGQLGL-GDPESFPHNE 219
Query: 129 HPMSWSEDF---DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ DF D K V +ACG H++AL +D + CG QL G
Sbjct: 220 RGHPYQPDFRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHG 272
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG---YPSSGTDAN-MEPREIRALS 81
+ +V +ACGF + A++ +G +++WG G G+LG Y G A+ + PR + A
Sbjct: 50 LVGVVCAQVACGFAYTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFG 109
Query: 82 GLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD---PHPMSWSED 136
G V +IS GG+H+ A +Y WG N GQ+G D+V + H +
Sbjct: 110 GRAVREISVGPGGYHTVALVSPADVYTWGHNRVGQLGYTNN-DVVPRNGEGAHFVPRPRR 168
Query: 137 FDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS ++V V G HT L + + + CG N QL +G
Sbjct: 169 VDSVSGLRVRRVVAGWGHTALLTAEGAAYVCGRNFQGQLGLG 210
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG------YPSSGTDANME 73
P R+D L V + G+ H LT EG + G +GQLG +P + +
Sbjct: 166 PRRVDSVSGLRVRRVVAGWGHTALLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQ 225
Query: 74 PREIRALSGLG---VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
P + R L LG V QI+ GG HS A T+DG +++ G N GQ+G G +D ++ P
Sbjct: 226 P-DFRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLG-HGNVD---NEQFP 280
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALC---DDNSLWGC 166
S + V++VACG+ TL LC + SL+ C
Sbjct: 281 RVVSR-LKASRRDVLEVACGNNGTLVLCGYFNPPSLFDC 318
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN--MEPREIR-ALSGLGVVQ 87
V + CG H LT G V++WG G G+LG+ DA+ PR +R AL G+ Q
Sbjct: 2 VAAVCCGGQHAAVLTAAGEVYTWGRGGFGRLGH----GDAHSLKAPRLVRGALVGVVCAQ 57
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH-------DPHPMSWSEDFDSQ 140
++ G ++AA + G LY WG G++G+ D H P P+ + F +
Sbjct: 58 VACGFAYTAAVSAQGALYTWGAGENGRLGLG---DYTGHGAAADVLTPRPL---DAFGGR 111
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
++ + V G HT+AL ++ G N QL
Sbjct: 112 AVREISVGPGGYHTVALVSPADVYTWGHNRVGQL 145
>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 806
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
VT IA G H L + Q+G +WG+ GQLG +S P +++ L+G +SA
Sbjct: 443 VTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGTSVDRFLPGPVQVQGLTG--ATALSA 500
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
+H+ A QDG ++ WG+N+ GQ+G +D+V P P+ V +A G
Sbjct: 501 TAYHTLALAQDGTVWGWGYNDSGQLG--DTVDMVRVTPAPL-------PGLTGVTALASG 551
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
+ H+LAL D ++W G N QL G VS+ M
Sbjct: 552 TYHSLALKQDGTVWAWGLNNLGQLGDGTTVSRTEQM 587
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 77/146 (52%), Gaps = 17/146 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQIS 89
VT +A H LAL Q+G V++WG S GQLG GT A+ + P ++ L+G V I+
Sbjct: 595 VTALAASTYHSLALKQDGTVWTWGYNSSGQLG---DGTTASRLTPAQVPGLTG--VSAIA 649
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVA 148
AG HS A QDG ++AWG N GQ+G V+ P P+ Q + V +A
Sbjct: 650 AGLVHSLALKQDGTVWAWGRNTDGQLGN----GAAVNSPVPV------QVQGLTGVSAIA 699
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
GS H+LAL D + W G N QL
Sbjct: 700 AGSYHSLALKQDGTAWSWGRNGTGQL 725
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 17/150 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQIS 89
V+ IA G H LAL Q+G V++WG + GQLG +G N P +++ L+G V I+
Sbjct: 645 VSAIAAGLVHSLALKQDGTVWAWGRNTDGQLG---NGAAVNSPVPVQVQGLTG--VSAIA 699
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VA 148
AG +HS A QDG ++WG N GQ+G E + P+ Q + V +A
Sbjct: 700 AGSYHSLALKQDGTAWSWGRNGTGQLGNE----TITGSLTPV------QVQGLTAVTALA 749
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
G H++AL D ++W G+N +L G
Sbjct: 750 GGDAHSMALLRDGTVWTWGYNAEGELGDGT 779
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 73/147 (49%), Gaps = 17/147 (11%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL-GVVQISAGGWHSAAR 98
H LAL Q+G V+ WG GQLG +M L GL GV +++G +HS A
Sbjct: 504 HTLALAQDGTVWGWGYNDSGQLG-----DTVDMVRVTPAPLPGLTGVTALASGTYHSLAL 558
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK-VVDVACGSRHTLAL 157
QDG ++AWG NN GQ+G D +S +E + V +A + H+LAL
Sbjct: 559 KQDGTVWAWGLNNLGQLG----------DGTTVSRTEQMPVPGLTDVTALAASTYHSLAL 608
Query: 158 CDDNSLWGCGWNEYNQLSMGCGVSQVS 184
D ++W G+N QL G S+++
Sbjct: 609 KQDGTVWTWGYNSSGQLGDGTTASRLT 635
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
VT +A G H LAL Q+G V++WG + GQLG + T + E + L+ V ++A
Sbjct: 545 VTALASGTYHSLALKQDGTVWAWGLNNLGQLGDGT--TVSRTEQMPVPGLTD--VTALAA 600
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
+HS A QDG ++ WG+N+ GQ+G + P V +A G
Sbjct: 601 STYHSLALKQDGTVWTWGYNSSGQLGDGTTASRLTPAQVP---------GLTGVSAIAAG 651
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
H+LAL D ++W G N QL G V
Sbjct: 652 LVHSLALKQDGTVWAWGRNTDGQLGNGAAV 681
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V+ IA G H LAL Q+G +SWG GQLG + ++ P +++ L+ V ++
Sbjct: 695 VSAIAAGSYHSLALKQDGTAWSWGRNGTGQLGNET--ITGSLTPVQVQGLTA--VTALAG 750
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD 122
G HS A +DG ++ WG+N G++G LD
Sbjct: 751 GDAHSMALLRDGTVWTWGYNAEGELGDGTTLD 782
>gi|356571739|ref|XP_003554031.1| PREDICTED: uncharacterized protein LOC100800604 [Glycine max]
Length = 1061
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS----SGTD 69
+ + +P ++D + I+ G H +ALT G V++WG G G+LG+P SG
Sbjct: 172 AHIQKLPCKVDSLGGSFIKLISAGKFHSVALTARGEVYTWGFGRGGRLGHPDFDIHSGQA 231
Query: 70 ANMEPREIRALSGLG---VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
A + PR++ SGLG V+ I A H TQ G ++ WG N GQ+G V
Sbjct: 232 AVITPRQV--TSGLGSRRVMAIGAAKHHMVIATQGGEVFTWGSNREGQLGYPS----VDT 285
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
P P S S ++V VA ++HT + D ++ G N QL G S +
Sbjct: 286 QPTPRRVS----SLRSRIVAVAAANKHTAVVSDLGEVFTWGCNREGQLGYGTSNSASNYT 341
Query: 187 TRLSVPEHVKNCPIVKLFAEHWNS 210
R V E +K + ++ A +++
Sbjct: 342 PR--VVESLKGKTLTRVSAAKYHT 363
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ +V +A H ++ G VF+WG GQLGY +S + +N PR + +
Sbjct: 289 PRRVSSLRSRIVA-VAAANKHTAVVSDLGEVFTWGCNREGQLGYGTSNSASNYTPRVVES 347
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G + ++SA +H+ DG ++ WG V +L + +
Sbjct: 348 LKGKTLTRVSAAKYHTIVLGSDGEVFTWGHRLVTPKRVVVSRNLKRSGSTLLKFHR---K 404
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN----QLSMGCGVSQVSV 185
+ + VV +A G H++AL DD +L+ ++ + QL CG + VS+
Sbjct: 405 ERLSVVSIAAGMVHSMALTDDGALFYWVSSDPDLRCQQLYAMCGRNMVSI 454
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G DH T+ VFSWG+G+ QLG + P ++ +L G + ISAG +HS
Sbjct: 146 GNDHSSVATE---VFSWGSGTNYQLG--TGNAHIQKLPCKVDSLGGSFIKLISAGKFHSV 200
Query: 97 ARTQDGFLYAWGWNNGGQVG 116
A T G +Y WG+ GG++G
Sbjct: 201 ALTARGEVYTWGFGRGGRLG 220
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 18/96 (18%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
FH R L V IA G H +ALT +G +F W + +D ++ ++
Sbjct: 401 FHRKER------LSVVSIAAGMVHSMALTDDGALFYWVS------------SDPDLRCQQ 442
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
+ A+ G +V ISAG + +AA T G +Y W G
Sbjct: 443 LYAMCGRNMVSISAGKYWTAAVTATGDVYMWDGKKG 478
>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
Length = 963
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 76/148 (51%), Gaps = 16/148 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG + S+ T P + LSG+ +V
Sbjct: 154 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTST-----PEIVENLSGVPLV 208
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QISAG HS A + G +Y+WG N+ GQ+G+ ++ S E D Q KV
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGH-----TYNKDSPSCIEALDDQ--KVEF 261
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ACG HT L ++ G +Y QL
Sbjct: 262 LACGGSHTALLTKSGLVFTFGDGKYGQL 289
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ D V +ACG H LT+ G+VF++G+G GQLG+ S T + P +
Sbjct: 248 PSCIEALDDQKVEFLACGGSHTALLTKSGLVFTFGDGKYGQLGHNS--TQNELRPCLVAG 305
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
L G V QI+ G H+ A D G ++++G GQ+G G + ++ P PM
Sbjct: 306 LVGNRVTQIACGRQHTLAYVSDMGKVFSFGSGKEGQLGNGGTCNQLM--PRPMK 357
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P +++ + + I+ G H +AL+ G V+SWG GQLG G N + P I
Sbjct: 196 PEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGL---GHTYNKDSPSCIE 252
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL V ++ GG H+A T+ G ++ +G GQ+G H+
Sbjct: 253 ALDDQKVEFLACGGSHTALLTKSGLVFTFGDGKYGQLG---------HNSTQNELRPCLV 303
Query: 139 SQNI--KVVDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMGCGVSQV 183
+ + +V +ACG +HTLA D ++ G + QL G +Q+
Sbjct: 304 AGLVGNRVTQIACGRQHTLAYVSDMGKVFSFGSGKEGQLGNGGTCNQL 351
>gi|330796442|ref|XP_003286276.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
gi|325083781|gb|EGC37225.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
Length = 423
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA------NME 73
P R++ + + ++ G++H + T +G+ FSWG +GQL ++ + +
Sbjct: 121 PKRIETLKNRNIISLSSGYEHSIVTTDKGL-FSWGRSDKGQLANGELKSEIKDQINYSSK 179
Query: 74 PREIRALSGL--GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ I+ + ++ +G HS +DG +Y+WG G G+ GK D V P +
Sbjct: 180 PQFIKNSDSTFRNIKKVCSGSDHSLVLNKDGTVYSWGHGYFGATGL-GKKDNVAT-PTKI 237
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
++++ +N V+D+ACG H+L L DN ++ GW EY QL
Sbjct: 238 QFNKEL--ENKLVLDIACGGYHSLILTSDNEIYSFGWGEYGQL 278
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+V DIACG H L LT + ++S+G G GQLG+ + T P++I +++ ++
Sbjct: 247 LVLDIACGGYHSLILTSDNEIYSFGWGEYGQLGHSENDTKNYYSPKKIESINSSTKIKSV 306
Query: 90 AGGWHSAARTQD--GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
G H+ + D G +Y+WGW GG +G ++ V P + NIK +
Sbjct: 307 FAGSHATSFYVDEKGDVYSWGWGEGGTLGFGDNQNVYV--PTQVK-----SLSNIK--KI 357
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQL 174
A G +HTLAL +DN ++ G N + QL
Sbjct: 358 AAGFKHTLALTNDNQVYVFGDNTFGQL 384
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
+ G + L LT + ++S G GS G LG D +EP+ I L ++ +S+G H
Sbjct: 82 SLGGNFILMLTIDNDLYSMGKGSYGVLGLDKEMKDLEVEPKRIETLKNRNIISLSSGYEH 141
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF----DSQNIKVVDVACG 150
S T G L++WG ++ GQ+ G+L + D S F DS + V G
Sbjct: 142 SIVTTDKG-LFSWGRSDKGQL-ANGELKSEIKDQINYSSKPQFIKNSDSTFRNIKKVCSG 199
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
S H+L L D +++ G + +G V+ T++ + ++N ++ +
Sbjct: 200 SDHSLVLNKDGTVYSWGHGYFGATGLGKK-DNVATPTKIQFNKELENKLVLDI 251
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 41 CLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAART 99
+ ++G V+SWG G G LG+ G + N+ P ++++LS + +I+AG H+ A T
Sbjct: 314 SFYVDEKGDVYSWGWGEGGTLGF---GDNQNVYVPTQVKSLSN--IKKIAAGFKHTLALT 368
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
D +Y +G N GQ+G K + V DP + DS NI
Sbjct: 369 NDNQVYVFGDNTFGQLG--SKQNNVFEDPQNDNQD---DSNNI 406
>gi|330840971|ref|XP_003292480.1| hypothetical protein DICPUDRAFT_157197 [Dictyostelium purpureum]
gi|325077287|gb|EGC31010.1| hypothetical protein DICPUDRAFT_157197 [Dictyostelium purpureum]
Length = 877
Score = 76.6 bits (187), Expect = 8e-12, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + F D +T IACG D +++ +G V+SWG+ +LG+ G PR+I
Sbjct: 252 PTLISSFGDKCMTTIACGTDSSFSISSDGHVYSWGSNINSKLGF--QGAILQSTPRKIEN 309
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKLDLVVHDPHPMSWSEDF 137
L + + ++ WH+ + G++Y +G N G++G + GK S+
Sbjct: 310 L--VKMKDVACSNWHTVLLDEKGYVYTFGSNIDGRLGRSINGK----------ESYQAGI 357
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
+ + KV + CG+ T L + N+L+ G N + QL GV +S ++ S
Sbjct: 358 VNLDFKVRKIHCGTNFTTVLTESNTLYSWGSNNHGQL----GVPSISAVSEFS 406
Score = 43.9 bits (102), Expect = 0.059, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 17/147 (11%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA---LSGLG- 84
L +TD + L G V+S+GN S G+LG TD P I +S G
Sbjct: 203 LTLTDTGHVYSAGLCSYDIGCVYSFGNSSMGRLGLDY--TDLAEPPIFISKPTLISSFGD 260
Query: 85 --VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ I+ G S + + DG +Y+WG N ++G +G ++ P + +
Sbjct: 261 KCMTTIACGTDSSFSISSDGHVYSWGSNINSKLGFQGA--ILQSTPRKI-------ENLV 311
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWN 169
K+ DVAC + HT+ L + ++ G N
Sbjct: 312 KMKDVACSNWHTVLLDEKGYVYTFGSN 338
>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
Length = 531
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +++ + ++ G H L T++G+V++WG+ QLG + T+ + P ++
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLG--NGTTNQGIAPVQV 121
Query: 78 -RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L V++++ G HS A DG L+AWG+NN GQVG + P P +
Sbjct: 122 CTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGS----TANQPTPRKITNC 177
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
++ +VV++ACG ++A+ D ++G G+N QL +G +Q++
Sbjct: 178 LHTK--RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI-RALSGLGVVQI 88
V ++ACG H +AL +G +F+WG + GQ+G SG+ AN PR+I L VV I
Sbjct: 130 VIEVACGSHHSMALAADGELFAWGYNNCGQVG---SGSTANQPTPRKITNCLHTKRVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G+ ++ + ++ + V +
Sbjct: 187 ACGQTSSMAVLDSGEVYGWGYNGNGQLGLG-------NNGNQLTPVRVAALHGMCVNQIV 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTLAL D+ L+ G N Y QL G
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +IACG +A+ G V+ WG GQLG ++G + P + AL G+ V QI
Sbjct: 183 VVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ--LTPVRVAALHGMCVNQIVC 240
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV-AC 149
G H+ A T +G LYAWG N GQ+G K +L+ P + ++ +V+++ AC
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLL--SPTQIMVEKE------RVIEIAAC 292
Query: 150 GSRHTLA 156
S HT A
Sbjct: 293 HSTHTSA 299
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ + V I CG+ H LALT EG++++WG + GQLG +G+ N + P +I
Sbjct: 224 PVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQI- 279
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ V++I+A SAA+TQ G +Y WG G V
Sbjct: 280 MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 318
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 35 ACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
AC F + + +T VF +G LG + + + P+++ AL G + +S
Sbjct: 24 ACVFGTSANEAIYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSY 81
Query: 91 G-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G G H T+DG +YAWG N Q+G G + + P+ + + +V++VAC
Sbjct: 82 GSGPHVLLTTEDGVVYAWGHNGYSQLG-NGTTNQGI---APVQVCTNLLIK--QVIEVAC 135
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
GS H++AL D L+ G+N Q+ G +Q P + NC
Sbjct: 136 GSHHSMALAADGELFAWGYNNCGQVGSGSTANQ-------PTPRKITNC 177
>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
Length = 985
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG H +AL+ +G +F WG + GQLG P+ +++L G+ V QISA
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQ-SPQHLQSLCGIPVAQISA 178
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG HS + G ++ WG N+ GQ+G+ D V P + K V ++CG
Sbjct: 179 GGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFV--PTIVK-----SLSGKKTVSISCG 231
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
HT L +++ G + QL
Sbjct: 232 GEHTATLSKGGTVFTFGSGGFGQL 255
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L+ + P + + V I+ G +H L+ G+VF WG+ S GQLG T
Sbjct: 152 LRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGL--GDTT 209
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
P +++LSG V IS GG H+A ++ G ++ +G GQ+G D + H
Sbjct: 210 DRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKD----EHH 265
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCD-DNSLWGCGWNEYNQLSMGCGVSQ 182
P +E + S KV V CG HTL L N ++ G QL G V Q
Sbjct: 266 PRLVAELWGS---KVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQ 316
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R ++ L V+QI+ G HS A + DG L+ WG N GQ+G+ + L+ H S
Sbjct: 110 RPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC 169
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I V ++ G H+ L ++G G N QL +G
Sbjct: 170 ------GIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLG 206
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,118,595,389
Number of Sequences: 23463169
Number of extensions: 176804405
Number of successful extensions: 433347
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4078
Number of HSP's successfully gapped in prelim test: 1537
Number of HSP's that attempted gapping in prelim test: 369953
Number of HSP's gapped (non-prelim): 30683
length of query: 241
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 103
effective length of database: 9,121,278,045
effective search space: 939491638635
effective search space used: 939491638635
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)