BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1607
(241 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+ + IACG HCLA+T EG V SWG GQLG T+ ++ P++I+A G+ + +
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGD--TEDSLVPQKIQAFEGIRIKMV 177
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+AG H+AA T+DG LY WGW G +G+ + D +V + + E K+ VA
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE-------KMSMVA 230
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG RHT+++ +L+ GW++Y QL G
Sbjct: 231 CGWRHTISVSYSGALYTYGWSKYGQLGHG 259
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P R+ ++ +ACG+ H ++++ G ++++G GQLG+ + ++ P ++
Sbjct: 214 VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD--LEDHLIPHKLE 271
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
ALS + QIS G H+ A T DG LY WGWN GQVGV LD P + + +D
Sbjct: 272 ALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQC--SPVQVRFPDDQ- 328
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ--VSVMTRLSVP---- 192
KVV V+CG RHTLA+ + N+++ G QL +G V + ++ LSV
Sbjct: 329 ----KVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASG 384
Query: 193 EHVKNCPIVKLFAEHWNS 210
+H+++ I + W S
Sbjct: 385 QHIESSNIDPSSGKSWVS 402
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 17/185 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P+++ + + CG DH +A +Q G+ V+SWG G G+LG+ +S +D P I+
Sbjct: 58 PTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS-SDL-FTPLPIK 115
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ + QI+ G H A T +G + +WG N GQ+G+ D +V P + + F+
Sbjct: 116 ALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKI---QAFE 170
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
IK+ VA G+ HT A+ +D L+G GW Y L +G ++ VPE V +
Sbjct: 171 GIRIKM--VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL-------VPERVTST 221
Query: 199 PIVKL 203
K+
Sbjct: 222 GGEKM 226
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL IV SWG G GQLG+ + + P ++ AL G +V ++ G
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDA--EDRPSPTQLSALDGHQIVSVTCGAD 77
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A +Q G +Y+WGW + G++G DL P P+ I++ +ACG
Sbjct: 78 HTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFT--PLPIK-----ALHGIRIKQIACGDS 130
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LA+ + + G N+ QL +G
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGLG 155
Score = 34.3 bits (77), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+ ISAG HS A + +WG GQ+G D P P S D I
Sbjct: 17 VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR----PSPTQLSA-LDGHQI-- 69
Query: 145 VDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMG 177
V V CG+ HT+A ++ GW ++ +L G
Sbjct: 70 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHG 103
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
++ MP+++ + + ++CG H LAL+++G VFSWG S GQLG + +
Sbjct: 111 FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQA 169
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLVVHDPHPM 131
P+++++L G+ + Q++AGG HS A + G + WG N GQ+ + G K+ ++ PH +
Sbjct: 170 IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI 229
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L ++ ++ G N QL
Sbjct: 230 G-----ALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 267
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
Q P + DL V ++CG +H +A+ +G VF+WG GS GQLG + + P
Sbjct: 60 QSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMP 118
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+I+AL+G+ ++Q+S G +HS A ++DG +++WG N+ GQ+G+ GK P +
Sbjct: 119 TKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSL 177
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
E I + VA G H+ AL + +G G N QL++
Sbjct: 178 E-----GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLAL 214
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V+S G+ S GQLG + EP I+AL+ L V +S G H
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVSCGKEH 85
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + IK++ V+CG H+
Sbjct: 86 SVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIK-----ALAGIKIIQVSCGHYHS 139
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL +D ++ G N QL +G
Sbjct: 140 LALSEDGHVFSWGRNSEGQLGLG 162
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 27/173 (15%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAARTQDGFLYAW 107
+ FSW GSR +PR ++A SG+ ++Q ++G HS + +Y+
Sbjct: 1 MYFSWAAGSR--------------KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSC 46
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G N+ GQ+G + D P P+ D + V V+CG H++A+C ++ G
Sbjct: 47 GDNSWGQLG--QRRDQSTERPEPIQALND-----LHVDLVSCGKEHSVAVCHKGKVFAWG 99
Query: 168 WNEYNQLSMGCGVSQVSVM-TRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHA 219
QL +G ++S M T++ +K I+++ H++S LS H
Sbjct: 100 AGSEGQLGIG-EFKEISFMPTKIKALAGIK---IIQVSCGHYHSLALSEDGHV 148
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-YPSSGTD 69
K+ Q++ P + +L V I+CG++H LT+EG VF++G S GQL P SG
Sbjct: 218 KVKEQIYK-PHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQR 276
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAA 97
P+ I + G V QI +H+ A
Sbjct: 277 G---PQLIEGIGG-RVSQIECASYHTIA 300
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGT 68
++ P ++ D+ + ++CG H LAL+++ VFSWG S GQLG +PS +
Sbjct: 112 FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS 171
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V
Sbjct: 172 -----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSN 225
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P+S +N+ VV ++CG HT L D ++ G N QL
Sbjct: 226 KPLSVGA---LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P + L+V ++CG +H LA+ +G VF+WG GS GQLG + + P++I
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ + ++Q+S G +HS A ++D +++WG N+ GQ+G+ + P S
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF------PSQASPQRVR 176
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL + +G G N QL++
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL 215
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG G P I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + D IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLND-----IKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG + ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL--SGRNVPVQSNKPLS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL LGVV IS G H+A TQDG ++ +G N GQ+G + P P E
Sbjct: 230 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG---------YSPTP----EK 276
Query: 137 FDSQNIKVVD-----VACGSRHTLA 156
Q ++ +D + CGS HTLA
Sbjct: 277 RGPQLVERIDGLVSQIDCGSYHTLA 301
Score = 38.1 bits (87), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 37/181 (20%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ F WG SR ++ R G ++Q ++G HS + + + G
Sbjct: 1 MYFCWGADSR------------ELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCG 48
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VACGSRHTLALCDDNSLWGCG 167
N+ GQ+G G + P P+ E +VD V+CG H+LA+C ++ G
Sbjct: 49 DNSRGQLGRRGAQRGEL--PEPIQALETL------IVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 168 WNEYNQLSMG----CGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSS 223
QL +G + +MT + + I+++ H++S LS KDS
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKIMT-------LNDIKIIQVSCGHYHSLALS-----KDSQ 148
Query: 224 I 224
+
Sbjct: 149 V 149
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V ++ G H+ A G +YAWG ++ GQ+G++G + + + S S+
Sbjct: 81 LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG G D +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GIDCQKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V Q++ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR V + G H+ DG +Y G N+
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V VACG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVACGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + G + + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGLQ-GSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 90.9 bits (224), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G++G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL-GIECQKQTS 180
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL-- 236
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 -KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALT-QEGIVFSWGNGSRGQLGYPSS 66
P ++ + +VT IACG H A G ++S+G G GQLG S+
Sbjct: 285 PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 90.9 bits (224), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 31/176 (17%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+L V + G +H L L G VFSWG G GQLG+ + +A +EPR + AL GL + +
Sbjct: 160 ELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGT--LEAELEPRLLEALQGLRMAK 217
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK--LDLVVHDPHPMSWSEDFDSQNIKVV 145
++AGGWHS ++ G +Y WGWN GQ+ + + + +ED + + V
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVA 277
Query: 146 D---------------------------VACGSRHTLALCDDNSLWGCGWNEYNQL 174
D +CGSRHT + L+ GW +Y QL
Sbjct: 278 DAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQL 333
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 64/169 (37%), Gaps = 39/169 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIR 78
P ++ L + +A G H + L++ G ++ WG GQL P+ SGT+ E E
Sbjct: 204 PRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEAT 263
Query: 79 ALS---------------------------------GLGVVQISAGGWHSAARTQDGFLY 105
L+ G V S G H+A T+ G LY
Sbjct: 264 ELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELY 323
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
WGW GQ+G + L P E F + ++V V CG +T
Sbjct: 324 TWGWGKYGQLGHKDSTSL----DRPCC-VEYFVERQLEVRAVTCGPWNT 367
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 90.9 bits (224), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 35/179 (19%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLTMA 213
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQV------------------------GVEGKLD 122
+++AGGWHS ++ G +Y WGWN GQ+ G + K
Sbjct: 214 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRT 273
Query: 123 LVVHD--PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V D P P + F + V V+CGSRHT + L+ GW +Y QL
Sbjct: 274 GRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQL 332
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 47/174 (27%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ L + ++A G H + +++ G ++ WG GQL P+ D RE
Sbjct: 201 PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 260
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G V++S G H+A T+ G
Sbjct: 261 TGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGE 320
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS---EDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E D + W E F + ++V V CG +T
Sbjct: 321 LYTWGWGKYGQLGHE--------DTTSLDWPRRVEYFVDKQLQVKAVTCGPWNT 366
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 17 FHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4067 LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DRQRR 4124
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P ++
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4183 LEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWHSAAR 98
H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG HSAA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV--------DVACG 150
T+DG LY WG + G++G D +S+NI + +V+CG
Sbjct: 527 TEDGELYTWGEGDFGRLG-----------------HGDSNSRNIPTLVKDISNVGEVSCG 569
Query: 151 SRHTLALCDD-NSLWGCGWNEYNQLSMG 177
S HT+AL D ++W G + +L G
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHG 597
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4176 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4233
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G+G+ +++ G S A T+DG +Y +G D ++ P + + +
Sbjct: 4234 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ------------DRLIGLPEGRARNHNR 4281
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q + + DVA G+ HTLAL + ++ G N QL +G
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLIE-----ELAATRIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ +++ D+A G +H LAL G V++WG+ S GQLG T+ EP +
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL--GHTNHVREPTLVTG 4339
Query: 80 LSGLGVVQISAGGWHSAA 97
L G V QISAG HSAA
Sbjct: 4340 LQGKNVRQISAGRCHSAA 4357
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S ++ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNR-VYKPKVIEA-----LQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIV 201
GS+ +LAL + WGCG +GCG S+ + + R + E + IV
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL-RPKLIEELAATRIV 668
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + + S S+
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSD---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQ 178
Query: 74 --PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL 236
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 ---KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVGV 117
L G V +I+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVE---GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GQ+G E K + VV D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRKKPEQVVA----------LDAQNI--VAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVK---NCPIVKLFAEHWNSARLS 214
QL + V + VP ++K + IV++ +++S LS
Sbjct: 112 SDGQLGL------VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLVMA 213
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-----DLVVHD-------------- 127
+++AGGWHS ++ G +Y WGWN GQ+ + + + V +
Sbjct: 214 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRT 273
Query: 128 -------PHPMSWSEDFDS-----QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P P + F + V +CGSRHT + L+ GW +Y QL
Sbjct: 274 GGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQL 332
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 65/171 (38%), Gaps = 41/171 (23%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPREI 77
P ++ LV+ ++A G H + +++ G ++ WG GQL P+ D RE
Sbjct: 201 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 260
Query: 78 RALS----------------------------------GLGVVQISAGGWHSAARTQDGF 103
L+ G V+ S G H+A T+ G
Sbjct: 261 TELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGE 320
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
LY WGW GQ+G E L P + E F + ++V V CG +T
Sbjct: 321 LYTWGWGKYGQLGHEDTTSL--DRPRRV---EYFVDKQLQVKAVTCGPWNT 366
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ + P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF------PSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEP 74
+P + + ++CG HCLAL +G F+WG S GQLG +PS + P
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-----P 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G ++ WG NN GQ+G+ + D
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-----KDRESPCHV 236
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV ++CG HT L ++ G QL
Sbjct: 237 KLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCG 167
+ V +ACG +HTLA + L +GCG
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCG 322
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGV 117
G H+ A G +YA+G GQ+G
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I + VACG H+LAL D L WG G
Sbjct: 64 GQLGHEREGN----KPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAG 111
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4022 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4079
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4137
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +VVD+ACGS TL L DD+++W G +Y +L G
Sbjct: 4138 EA-----LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4243
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4244 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4297
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4298 -LQGKKVNRVACGSAHTLA 4315
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR 75
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR
Sbjct: 2980 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PR 3037
Query: 76 EIRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
+I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3038 QITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI-- 3093
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3094 -EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3140
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 616
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRG 640
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3199
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3252
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3253 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3297
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L + S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3026 LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3085
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3086 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3133
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3134 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193
Query: 179 GVSQ 182
+ Q
Sbjct: 3194 NIPQ 3197
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4202
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4255
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4256 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3090 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3147
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3203 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3243
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3250
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3305
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3306 LEGQ--KITRVACGSSHSVA 3323
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 758
Query: 138 DSQNIKVVDVACGSRHTLA 156
D+++I V +ACG + A
Sbjct: 759 DTKHI--VGIACGPAQSFA 775
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 610
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D VV V
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQ 687
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4139
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G VV I+ +G + T D +++WG + G++G G V PM
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4191
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4192 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ S + P+ ++
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD------------TLAPQLVQG 489
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 490 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 545
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 546 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 586
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3952 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4010 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4064
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4065 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4104
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
N E + + SG +++ A G SAA + ++ WG N+ Q+G G + P
Sbjct: 2930 NEEEEDEKGNSG-SLIRKKAAGLESAATIRTK-VFVWGLNDKDQLG--GLKGSKIKVP-- 2983
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
S+SE + N VV VA GS+ A+ + ++ CG +L +G V + +++
Sbjct: 2984 -SFSETLSALN--VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQIT 3040
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
++ P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+
Sbjct: 4024 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH--GNRSPC 4081
Query: 72 MEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
PR I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4082 DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLV 4139
Query: 132 SWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
Q +V+D+ACGS TL L DD+++W G +Y +L G
Sbjct: 4140 EAL-----QGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR++
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQV 4245
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4246 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVAA---- 4299
Query: 138 DSQNIKVVDVACGSRHTLA 156
Q KV VACGS HTLA
Sbjct: 4300 -LQGKKVNRVACGSAHTLA 4317
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+PS + L V +A G A+T EG V+S G + G+LG S + PR+
Sbjct: 2981 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQ 3039
Query: 77 IRALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I ALS V V + +GG H+ A T DG +++WG + G++G +++ P +
Sbjct: 3040 ITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLI--- 3094
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
E ++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3095 EALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSS- 66
L M S +P ++ VV +A G H ALT +G VFSWG G G+LG+ S
Sbjct: 3027 LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3086
Query: 67 GTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
D +PR I AL + I+ G HSAA T G LY WG G++G H
Sbjct: 3087 NCD---KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG---------H 3134
Query: 127 DPHPMSWSEDFDSQNI--KVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL----SMGC 178
+ + +V+ VACGSR TLAL D+ ++ G ++ +L S GC
Sbjct: 3135 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194
Query: 179 GVSQ 182
+ Q
Sbjct: 3195 NIPQ 3198
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VVQISAGGWHS 95
H LAL G V+SWG G G+LG+ T EP+ I A SG VV I+ G +S
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T +G LY WG N G++G D + PM + + +KV+DVACGS
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKVIDVACGSGDAQ 617
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLA+ ++ +W G +Y +L G
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG 641
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P + L V +ACG LALT EG+VFSWG+G G+LG G++ P+ I
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNI 3200
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+G GV QI G S A T+ G ++ WG + ++G G D+ V P +
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVVE----- 3253
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ K+V VA G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3254 GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3298
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 31 VTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4147 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4204
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D H + Q KV+ +A
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGS------DDHVRRPRQVQGLQGKKVIAIA 4257
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4258 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DIACG H ALT G +++WG G G+LG+ + T ++P+ ++
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKPKMVKV 3148
Query: 80 LSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+Q++ G + A T +G +++WG + G++G G + P + E
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERL 3203
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ Q V + CG++ +LAL +W G +Y +L G V
Sbjct: 3204 NGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPTALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLA 156
DS++I V +ACG + A
Sbjct: 760 DSKHI--VGIACGPAQSFA 776
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPRE 76
++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++ +P+
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVRKPQV 3251
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ L G +V ++ G H A T G +YAWG N+ GQ G V P + +
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKP---TLVQG 3306
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ Q K+ VACGS H++A
Sbjct: 3307 LEGQ--KITRVACGSSHSVA 3324
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS- 89
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 90 -AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+G + A T++G +++WG + G++G G P + +D D V+ V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG--CKTPKLIEKLQDLD-----VIKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQ 688
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V D+A G H +T G +++WG G G+LG+ S ++ ++P+ + A
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH--SDSEDQLKPKLVEA 4141
Query: 80 LSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ I+ +G + T D +++WG + G++G G V PM
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV----PMK----I 4193
Query: 138 DS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
DS + VV V CGS+ ++AL +++ G +Y++L G
Sbjct: 4194 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + L V +AC L L++ G V++ S + P+ ++
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD------------MLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V+I+A G H A G +Y+WG +GG++G + L P S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL----EEPKVISAFS 546
Query: 138 DSQNIK-VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
G ++ WG+ RGQLG G + P AL+ L VQ+ G A T DG LYA
Sbjct: 3954 GTIYGWGHNHRGQLGG-IEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G+ GG++G+ G V P + E IK V V G +H LAL + ++ G
Sbjct: 4012 GYGAGGRLGIGGTES--VSTP---TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4066
Query: 168 WNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
E +L G S R V E ++ +V + A +SA
Sbjct: 4067 EAEDGKLGHG----NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4106
Score = 31.2 bits (69), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
+++ G S A + ++ WG N+ Q+G G + P S+SE + N V
Sbjct: 2944 LIRKKTPGLESTATIRTK-VFVWGLNDKDQLG--GLKGSKIKVP---SFSETLSALN--V 2995
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
V VA GS+ A+ + ++ CG +L +G V + +++
Sbjct: 2996 VQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQIT 3041
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 84.3 bits (207), Expect = 6e-16, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 80/151 (52%), Gaps = 22/151 (14%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG +PS+ T P+ + L+G+ +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTT-----PQIVEHLAGVPLA 194
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDFDSQNIK 143
QISAG HS A + G +Y+WG N GQ+G+ E K DP S E D+Q K
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESK-----DDP---SLIEGLDNQ--K 244
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V VACG H+ L D L+ G ++ QL
Sbjct: 245 VEFVACGGSHSALLTQDGLLFTFGAGKHGQL 275
Score = 70.1 bits (170), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ + V +ACG H LTQ+G++F++G G GQLG+ S T + P +
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS--TQNELRPCLVAE 291
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V QI+ G WH+ A D G ++++G GQ+G G D ++ P +S SE+
Sbjct: 292 LVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEEL 350
Score = 69.7 bits (169), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG T++ +P I
Sbjct: 182 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGL--GHTESKDDPSLIEG 239
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG HSA TQDG L+ +G GQ+G + + P +E
Sbjct: 240 LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQN----ELRPCLVAELV-- 293
Query: 140 QNIKVVDVACGSRHTLALCDD 160
+V +ACG HTLA D
Sbjct: 294 -GYRVTQIACGRWHTLAYVSD 313
Score = 39.3 bits (90), Expect = 0.023, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
Q K++ + CG H+LAL L+ G N + QL +G + T + EH+ P
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG---RKFPSTTTPQIVEHLAGVP 192
Query: 200 IVKLFAEHWNSARLSV 215
+ ++ A +S LS+
Sbjct: 193 LAQISAGEAHSMALSM 208
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L V+ I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVMNI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T +G VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN V+++ACG ++A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG P +
Sbjct: 194 IPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSAHTSA 323
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG +++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG---TGNKSNQSYPTPVV 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 342
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L V+ I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVMSI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G L + P P + Q I+V VA
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLG----LGSSGNQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTL L D+ ++ G N Y QL G
Sbjct: 264 CGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T +G VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG + P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TANQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN V+ +ACG ++A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG +A+ G V+ WG GQLG SSG P +
Sbjct: 194 IPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSAHTSA 323
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG +++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG---TGNKSNQSYPTPVV 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA++Q G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQCRGQSV 342
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG LALT++G VFSWG+G G+LG G++ + P EI LSG+GVVQI
Sbjct: 3179 VVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVVQI 3236
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D V P P+ + +V+ VA
Sbjct: 3237 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIG-----GLRGRRVIHVA 3289
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H LA+ D ++ G N++ Q G
Sbjct: 3290 VGALHCLAVTDAGQVYAWGDNDHGQQGSG 3318
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L V + CG +ALT+ G V++WG G +LG+ S D P+++
Sbjct: 4284 LPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS--VDHVRRPKKVA 4341
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G +Y WG N+ GQ+G +G + + P ++
Sbjct: 4342 ALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTVT-AIQRPRLVA-----A 4394
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 4395 LQGKHIVKVTCGSAHTLAL 4413
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ D+ACG H A++ +G +++WG G G+LG+ + T ++P+ + AL+G VVQ++
Sbjct: 3127 IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTT--QLKPKLVTALAGRRVVQVAC 3184
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T+DG +++WG + G++G G PH E I VV +
Sbjct: 3185 GSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG--SDTPH-----EIERLSGIGVVQIE 3237
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG++ +LAL +W G +Y +L G
Sbjct: 3238 CGAQFSLALTRAGEVWTWGKGDYYRLGHG 3266
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P ++ VV +A G H LALT +G VFSWG G G+LG+ + T +PR
Sbjct: 3061 LPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLD--KPRL 3118
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ AL + ++ G HSAA + G LY WG G++G H +
Sbjct: 3119 VEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG---------HGDNTTQLKPK 3169
Query: 137 FDS--QNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+ +VV VACGSR TLAL +D +++ G ++ +L G
Sbjct: 3170 LVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3214
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PR 75
+P+ + + V +A G HCLALT EG V++WG G G+LG+ G + + P+
Sbjct: 4124 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH---GNRMSYDRPK 4180
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ L+G+ V I+ G HSAA T G + WG G++G D + P +
Sbjct: 4181 LVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALL 4238
Query: 136 DFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + +D+ACGS TL + DD+++W G +Y +L G
Sbjct: 4239 GY-----RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4277
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 95/239 (39%), Gaps = 63/239 (26%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS---------- 66
+ P ++H + V DIACG H A+T G V +WG G G+LG+ S
Sbjct: 4176 YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 4235
Query: 67 ------------------------------------------GTDANMEPREIRALSGLG 84
G+D P +I +L+GLG
Sbjct: 4236 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 4295
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV++ G S A T+ G +Y WG + ++G G +D H P + Q K+
Sbjct: 4296 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLG-HGSVD---HVRRPKKVAA---LQGKKI 4348
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
+ +A GS H +A D ++ G N+ QL G V+ + R + ++ IVK+
Sbjct: 4349 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGT----VTAIQRPRLVAALQGKHIVKV 4403
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V I CG LALT+ G V++WG G +LG+ G +P+ I
Sbjct: 3222 PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH--GGDQHVRKPQPIGG 3279
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEGKLDLVVHDPHPMSWS 134
L G V+ ++ G H A T G +YAWG N+ GQ G V K LV+
Sbjct: 3280 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI--------- 3330
Query: 135 EDFDSQNIKVVDVACGSRHTLA 156
D+ + V VACGS H++A
Sbjct: 3331 -GLDA--VFVNRVACGSSHSIA 3349
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 19 MPSRMDHFLDLVVTDIACGF--DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ + D +V D+A G H LALT EG+VF+WG+G G+LG + + +++P
Sbjct: 710 LPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG--NGNCNGSLQPIL 767
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN--GGQVGVEGKLDLVVHDPHPMSWS 134
+ +L V ++ AG S A + +G LY WG G Q LV S
Sbjct: 768 VESLPR--VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQ--------LVERSVQGCSVP 817
Query: 135 EDFDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
S Q+ ++VDVA H LAL ++G G N+ Q+
Sbjct: 818 RLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGV--VQISA 90
IA G ++Q+G V++ G G+ G+LG G N+ P ++ L V V + +
Sbjct: 3024 IAGGSKSLFIVSQDGKVYACGEGTNGRLGL---GVTHNVPLPHQLPVLRQYVVKKVAVHS 3080
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A T DG +++WG G++G + L P E ++ I+ DVACG
Sbjct: 3081 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL--DKPR---LVEALRAKKIR--DVACG 3133
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S H+ A+ L+ G EY +L G +Q+
Sbjct: 3134 SSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLK 3167
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+++ V + CG + A+T G + +WG G+ +LG+ +S D P +
Sbjct: 658 VPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNS--DDRSLPTLVV 715
Query: 79 ALSGLGVVQIS--AGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSW 133
ALS VV ++ +G HS A T +G ++AWG + G++G G L ++ + P
Sbjct: 716 ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--- 772
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
+V V GS+ ++AL + L+
Sbjct: 773 ---------RVQRVFAGSQFSVALSSEGQLY 794
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 20 PSRMDHFLDLVVTDIA--CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P M+ V IA C H LA+ +SWG G +LG+ T A P +I
Sbjct: 605 PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGH--GDTHARAVPTKI 662
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL V + G +SAA T G L WG ++G G D ++ S+
Sbjct: 663 AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLG-HGNSDDRSLPTLVVALSDHM 721
Query: 138 DSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
VVDVA GS H+LAL + ++ G +Y +L G
Sbjct: 722 ------VVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 757
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V WG + QLG G+ + P + +S L + I+ G +QDG +YA G
Sbjct: 2988 VMVWGLNDKEQLGG-LKGSKVKV-PTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGE 3045
Query: 110 NNGGQVGVEGKLDLVVHD---PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
G++G+ V H+ PH + + +K V V G +H LAL D ++
Sbjct: 3046 GTNGRLGLG-----VTHNVPLPHQLPVLRQY---VVKKVAVHSGGKHALALTLDGKVFSW 3097
Query: 167 GWNEYNQLSMG 177
G E +L G
Sbjct: 3098 GEGEDGKLGHG 3108
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 11/169 (6%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ RGQLG P E ALS L VQ++ G A T DG L+A G+
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCE--ALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4108
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
+GG++GV G + + +K V V G +H LAL + ++ G
Sbjct: 4109 GSGGRLGVGGSDSWAIP-----TLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEG 4163
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEH 218
E +L G +S R + EH+ + + +SA ++ H
Sbjct: 4164 EDGKLGHGNRMS----YDRPKLVEHLNGMSVADIACGSAHSAAITASGH 4208
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 317
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSTHTSA 323
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +L+G
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGK 98
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 152
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 201
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ + P P + Q I+V VA
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN----QPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
CG HTL L D+ ++ G N Y QL G +Q P V+ I+++ A H
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-----SYPTPVTVEKDRIIEIAACH 317
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 20 PSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG V+ P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS----TVNQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 308
Query: 138 DSQNIKVVDV-ACGSRHTLA 156
+++++ AC S HT A
Sbjct: 309 -----RIIEIAACHSTHTSA 323
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 304
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ +++I+A SAA+TQ G +Y WG G V
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 28 DLVVTDIACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL 83
+L + AC F + L T +F G G LG + +EPR + +L+G
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGK 98
Query: 84 GVVQISAG-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +S G G H T +G ++ WG N Q+G G + H P S + N
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NK 152
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
+V++VACGS H+L L D ++ G+N Q+ G V+Q +P V C
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-------PIPRRVTGC 201
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 19 MPSRMDHFLDLVVTDIACGF-DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +++ + ++ G H L T++G+V++WG+ QLG + T+ + P ++
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLG--NGTTNQGIAPVQV 121
Query: 78 -RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L V++++ G HS A DG L+AWG+NN GQVG + P P +
Sbjct: 122 CTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGS----TANQPTPRKVTNC 177
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
++ +VV++ACG ++A+ D ++G G+N QL +G +Q++
Sbjct: 178 LHTK--RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI-RALSGLGVVQI 88
V ++ACG H +AL +G +F+WG + GQ+G SG+ AN PR++ L VV I
Sbjct: 130 VIEVACGSHHSMALAADGELFAWGYNNCGQVG---SGSTANQPTPRKVTNCLHTKRVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G+ ++ + ++ + V +
Sbjct: 187 ACGQTSSMAVLDSGEVYGWGYNGNGQLGLG-------NNGNQLTPVRVAALHGMCVNQIV 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTLAL D+ L+ G N Y QL G
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +IACG +A+ G V+ WG GQLG ++G + P + AL G+ V QI
Sbjct: 183 VVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ--LTPVRVAALHGMCVNQIVC 240
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV-AC 149
G H+ A T +G LYAWG N GQ+G K +L+ P + ++ +V+++ AC
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLL--SPTQIMVEKE------RVIEIAAC 292
Query: 150 GSRHTLA 156
S HT A
Sbjct: 293 HSTHTSA 299
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ + V I CG+ H LALT EG++++WG + GQLG +G+ N + P +I
Sbjct: 224 PVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQI- 279
Query: 79 ALSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ V++I+A SAA+TQ G +Y WG G V
Sbjct: 280 MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 318
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 35 ACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
AC F + + +T VF +G LG + + + P+++ AL G + +S
Sbjct: 24 ACVFGTSANEAIYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSY 81
Query: 91 G-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G G H T+DG +YAWG N Q+G G + + P+ + + +V++VAC
Sbjct: 82 GSGPHVLLTTEDGVVYAWGHNGYSQLG-NGTTNQGI---APVQVCTNLLIK--QVIEVAC 135
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
GS H++AL D L+ G+N Q+ G +Q P V NC
Sbjct: 136 GSHHSMALAADGELFAWGYNNCGQVGSGSTANQ-------PTPRKVTNC 177
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 75.9 bits (185), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 28/178 (15%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
L L M S + S HF + D++ G H L LT +G+VFS+G +GQLG
Sbjct: 372 LGEQSLLMQSTPKLVQSLQGHF----IIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGI- 426
Query: 65 SSGTDANME--PREIRALSG--------LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQ 114
G +N + P++I+ + ++++SAGG+HS A + + YAWG ++ G
Sbjct: 427 --GCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGV 484
Query: 115 VG----VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGC 166
+G V+G +L V + S N+K +DV+ G +H +A+ D SL WGC
Sbjct: 485 LGTSIDVQGDRNLPV-----LINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGC 537
Score = 70.5 bits (171), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++CG + +T +G++F++G G G+LG P+ +++L G ++ +S+
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSS 399
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVE--GKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
GG HS T G ++++G N+ GQ+G+ + S+ Q I ++ V+
Sbjct: 400 GGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVS 459
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
G H++A+ D+N + G ++Y L
Sbjct: 460 AGGYHSIAISDNNDTYAWGRSDYGVL 485
Score = 46.2 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS---GLGVVQISA 90
I+ G H +T +G ++++G+G G+LG+ ++ P+ + L VV I+
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGH--GNLESYSSPKLVEFFQTKPSLRVVSIAN 250
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGV 117
GG HS A T G +Y+WG N+ Q+G+
Sbjct: 251 GGKHSLALTICGKVYSWGGNDSCQLGL 277
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
+V++S G SA T G L+ +G + G++G+ G+ L++ + S Q +
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGL-GEQSLLMQSTPKLVQS----LQGHFI 394
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
+D++ G H+L L + ++ G N+ QL +GC +Q ++
Sbjct: 395 IDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTI 435
Score = 41.6 bits (96), Expect = 0.005, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA----LSGLGVV 86
+ ++ G H +A++ ++WG G LG P I + + + +
Sbjct: 455 IIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFI 514
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+S+G H+ A + DG LY+WG N G ++G
Sbjct: 515 DVSSGFQHNVAMSIDGSLYSWGCNAGQRLG 544
Score = 40.4 bits (93), Expect = 0.010, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRAL-SGLGVVQISAGGWHSAARTQDGFLYAWGWNN 111
WGNG R + NM + + +V IS G HS+ T G LY +G
Sbjct: 164 WGNGIRNY-------KNCNMSSIGFSEMYNQQKIVLISTGAIHSSFITDQGNLYTFG--- 213
Query: 112 GGQVGVEGKLDLVVHDPHPMSWSEDFDSQ-NIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
G +G G +L + + E F ++ +++VV +A G +H+LAL ++ G N+
Sbjct: 214 DGLLGKLGHGNLESYSSPKLV--EFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGND 271
Query: 171 YNQLSMGCG 179
QL +G G
Sbjct: 272 SCQLGLGNG 280
Score = 33.5 bits (75), Expect = 1.4, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
D++ GF H +A++ +G ++SWG + +LG+ S
Sbjct: 515 DVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKS 547
Score = 33.1 bits (74), Expect = 1.6, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 19/34 (55%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
L V IA G H LALT G V+SWG QLG
Sbjct: 243 LRVVSIANGGKHSLALTICGKVYSWGGNDSCQLG 276
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI-RALSGLGVVQI 88
V ++ACG H +AL +G VF+WG + GQ+G SG+ AN PR++ L VV I
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVG---SGSTANQPTPRKVTNCLHIKRVVGI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ ++ + ++ ++ V +
Sbjct: 187 ACGQTSSMAVLDNGEVYGWGYNGNGQLGLG-------NNGNQLTPVRVAALHSVCVNQIV 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTLAL D+ L+ G N Y QL G
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 9/146 (6%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RALSGLGVVQISAGGWHSAAR 98
H L T++G+V++WG+ QLG + T+ + P ++ L VV+++ G HS A
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLG--NGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
DG ++AWG+NN GQVG + P P + + +VV +ACG ++A+
Sbjct: 144 AADGEVFAWGYNNCGQVGSGS----TANQPTPRKVTNCLHIK--RVVGIACGQTSSMAVL 197
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVS 184
D+ ++G G+N QL +G +Q++
Sbjct: 198 DNGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG +A+ G V+ WG GQLG ++G + P + AL + V QI
Sbjct: 183 VVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ--LTPVRVAALHSVCVNQIVC 240
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV-AC 149
G H+ A T +G LYAWG N GQ+G K +L + H M E +VV++ AC
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGNKNNL-LSPAHIMVEKE-------RVVEIAAC 292
Query: 150 GSRHTLA 156
S HT A
Sbjct: 293 HSAHTSA 299
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + V I CG+ H LALT EG++++WG + GQLG +G N+
Sbjct: 224 PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIM 280
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQV 115
+ VV+I+A SAA+TQ G +Y WG G V
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 318
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG-GWHSAARTQ 100
L +T VF +G LG + + + P+++ L G + +S G G H T+
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTE 92
Query: 101 DGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
DG +YAWG N Q+G G + + P+ + + +VV+VACGS H++AL D
Sbjct: 93 DGVVYAWGHNGYSQLG-NGTTNQGI---APVQVCTNLLIK--QVVEVACGSHHSMALAAD 146
Query: 161 NSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVK 202
++ G+N Q+ G +Q P V NC +K
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQ-------PTPRKVTNCLHIK 181
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 23 MDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG 82
+ HFLD + +ACG H +T EG +++WG G QLG+ + MEP ++ +G
Sbjct: 1016 VKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGH--GNKNERMEPHQVFEPNG 1073
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
V +S G H+ A T DG ++AWG N+ GQ GV K
Sbjct: 1074 AKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTK 1111
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG--LGVVQISAG 91
IACG +H L L+ G + +WG GQ G S AN+ + G + +I+ G
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLH-----QVDGDWPAIEKIACG 835
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
+HSA DG L+ +GW GQ+G G+ + P + KV +ACG
Sbjct: 836 QFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVP------TRVNGLICKVTQIACGR 889
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV-PEHVKN 197
HT+ L D + CG Y Q+ + + +V T L + P V++
Sbjct: 890 AHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRD 936
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 47/188 (25%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWG---------------------------------- 54
L V DIA + H + +T++ VF WG
Sbjct: 932 LRVRDIATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPST 991
Query: 55 NGS--RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
NGS R L P+ ++ RE++ +V ++ G HSA T +G LY WG
Sbjct: 992 NGSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLD 1051
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
Q+G K + + +PH + F+ K V+V+ G+ HT+A DD S++ G N++
Sbjct: 1052 YQLGHGNKNERM--EPHQV-----FEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFG 1104
Query: 173 QLSMGCGV 180
Q CGV
Sbjct: 1105 Q----CGV 1108
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IACG H + +G ++++G G GQLG+ + P + L V QI+
Sbjct: 829 IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI-CKVTQIAC 887
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSEDFDSQNIKVVDVAC 149
G H+ T G + G + GQ+GV+ + V P P+ ++V D+A
Sbjct: 888 GRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLG--------PLRVRDIAT 939
Query: 150 GSRHTLALCDDNSLWGCGWN 169
H++ + +DN ++ G N
Sbjct: 940 HYYHSICITEDNRVFEWGRN 959
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+R++ + VT IACG H + LT G V G+GS GQ+G + + +++
Sbjct: 871 VPTRVNGLI-CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMG-------VDDDIKKVF 922
Query: 79 A-----LSGLGVVQISAGGWHSAARTQDGFLYAWGWN 110
A L L V I+ +HS T+D ++ WG N
Sbjct: 923 AFTPLPLGPLRVRDIATHYYHSICITEDNRVFEWGRN 959
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ P ++ F + +A G DH L L +EG+VF+WGNG + QLG ME
Sbjct: 207 KIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKV------MER 260
Query: 75 REIRALS----GLGVVQ-ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD--LVVHD 127
++ L GL V+ I++G H A T+D L +WG N GQ GV ++ +V
Sbjct: 261 FRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTK 320
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
P ++ + N+ + +A G H+L L D L+ CG
Sbjct: 321 PKRLALPD-----NVVIRSIAAGEHHSLILSQDGDLYSCG 355
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 30/205 (14%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTD-IACGFDHCLALTQEGIVFSWGNG--SRG 59
+ L S P K+ + F + + L TD ++C AL G V++WG + G
Sbjct: 144 NELESTPAKIPRESFPPLAEGHKVVQLAATDNMSC------ALFSNGEVYAWGTFRCNEG 197
Query: 60 QLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--V 117
LG+ P ++ S +VQ++ G H ++G ++AWG Q+G V
Sbjct: 198 ILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKV 257
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ L DP P F +++K +A G H AL DN L G N++ Q
Sbjct: 258 MERFRLKTLDPRP------FGLRHVKY--IASGENHCFALTKDNKLVSWGLNQFGQ---- 305
Query: 178 CGVSQ-------VSVMTRLSVPEHV 195
CGVS+ V+ RL++P++V
Sbjct: 306 CGVSEDVEDGALVTKPKRLALPDNV 330
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM--EPREIRALSGLGVVQI 88
V IA G +HC ALT++ + SWG GQ G D + +P+ + + + I
Sbjct: 276 VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSI 335
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSWSEDFDSQ--NI-K 143
+AG HS +QDG LY+ G + +VG+ + + D H + + ++ N+ K
Sbjct: 336 AAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPK 395
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
VA GS H++A+ + + G+ E + +G V TR+
Sbjct: 396 FKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIK 442
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG------TDANME 73
P R+ ++V+ IA G H L L+Q+G ++S G ++G P D + +
Sbjct: 321 PKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGK 380
Query: 74 PREIRALSGLGVV----QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
R + + L V ++AG HS A Q+G Y+WG+ VG L D
Sbjct: 381 ARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVG----LGPFEDDTE 436
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLA 156
+ ++ +Q+ ++ V CG + +++
Sbjct: 437 VPTRIKNTATQDHNIILVGCGGQFSVS 463
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 38 FDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPR--EIRALSGLGVVQISAGGWH 94
+ H Q +F WG GS +LG P + PR ++ + GG H
Sbjct: 36 YKHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMH 95
Query: 95 SAARTQDGFLYAWGWNNGGQVG 116
+ A ++ +++WG N+ G +G
Sbjct: 96 TLALDEESNVWSWGCNDVGALG 117
>sp|Q920R0|ALS2_MOUSE Alsin OS=Mus musculus GN=Als2 PE=1 SV=3
Length = 1651
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 18/181 (9%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGN---GSRGQLGYPSSGTDANMEPRE 76
P R+ + V A G H + LT++G V+S+G S PSS P
Sbjct: 32 PERLPGWGGKTVLQAALGVRHGVLLTEDGEVYSFGTLPWKSESAEICPSS-------PLL 84
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
AL G V+ ++ G +HS A T+ G +Y WG N GQ V + + P +S SE
Sbjct: 85 ESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSET 144
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
S ++++ +ACG HTLAL +W G GC + ++ ++ P+ V+
Sbjct: 145 SPSLAVRILQLACGEEHTLALSLSREIWAWG--------TGCQLGLITTTFPVTKPQKVE 196
Query: 197 N 197
+
Sbjct: 197 H 197
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+V+T G L + V++WG G GQLG+ ++P ++ L G V+ +
Sbjct: 501 VVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGH--GDVLPRLQPLCVKCLDGKEVIHL 558
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE--DFDSQNIKVVD 146
AGG HS A T +Y+WG N GQ+G H P + S+N V
Sbjct: 559 EAGGSHSLALTAKSQVYSWGSNTFGQLG---------HSEFPTTVPRLSKVSSEN-GVWS 608
Query: 147 VACGSRHTLALCD 159
VA G ++L L D
Sbjct: 609 VAAGQDYSLFLVD 621
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANMEPREIRALSGLGV 85
V +A G H A+T+ G+V+ WG + GQ Y + ++ E + +
Sbjct: 93 VITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRI 152
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+Q++ G H+ A + ++AWG G Q+G+ + P++ + + +VV
Sbjct: 153 LQLACGEEHTLALSLSREIWAWG--TGCQLGL-------ITTTFPVTKPQKVEHLAGRVV 203
Query: 146 -DVACGSRHTLAL 157
VACG+ H+LAL
Sbjct: 204 LQVACGAFHSLAL 216
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L + + +ACG +H LAL+ +++WG G QLG ++ T +P+++ L+G V+
Sbjct: 148 LAVRILQLACGEEHTLALSLSREIWAWGTGC--QLGLITT-TFPVTKPQKVEHLAGRVVL 204
Query: 87 QISAGGWHSAARTQ 100
Q++ G +HS A Q
Sbjct: 205 QVACGAFHSLALVQ 218
>sp|P0C5Y8|ALS2_RAT Alsin OS=Rattus norvegicus GN=Als2 PE=2 SV=1
Length = 1651
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 22/183 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGN---GSRGQLGYPSSGTDANMEPRE 76
P R+ + V A G H + LT++G V+S+G S PSS P
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWKSEAAEICPSS-------PLL 84
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
AL G VV ++ G +HS A T+ G +Y WG N GQ V + V +P P+S S+
Sbjct: 85 ESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQ--YVSEPSPVSISDS 142
Query: 137 FDSQ--NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
S ++++ +ACG HTLAL +W G GC + ++ ++ P+
Sbjct: 143 ETSPLLAVRILQLACGEEHTLALSISREIWAWG--------TGCQLGLITTTFPVTKPQK 194
Query: 195 VKN 197
V++
Sbjct: 195 VEH 197
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+V+T G L + V++WG G GQLG+ ++P ++ L G V+ +
Sbjct: 501 VVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGH--GDVLPRLQPLCVKCLDGKEVIHL 558
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVG 116
AGG HS A T +Y+WG N GQ+G
Sbjct: 559 EAGGSHSLALTAKSQVYSWGSNTFGQLG 586
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANMEPREIRALSGLGV 85
V +A G H A+T+ G+V+ WG + GQ Y S + ++ E L + +
Sbjct: 93 VVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRI 152
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+Q++ G H+ A + ++AWG G Q+G+ + P++ + + +VV
Sbjct: 153 LQLACGEEHTLALSISREIWAWG--TGCQLGL-------ITTTFPVTKPQKVEHLAGRVV 203
Query: 146 -DVACGSRHTLAL 157
VACG+ H+LAL
Sbjct: 204 LQVACGAFHSLAL 216
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
S L + + +ACG +H LAL+ +++WG G QLG ++ T +P+++ L
Sbjct: 142 SETSPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITT-TFPVTKPQKVEHL 198
Query: 81 SGLGVVQISAGGWHSAARTQ 100
+G V+Q++ G +HS A Q
Sbjct: 199 AGRVVLQVACGAFHSLALVQ 218
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 6/132 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G H LALT + V+SWG+ + GQLG+ T PR + S GV ++A
Sbjct: 555 VIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTV---PRLSKVSSESGVWSVAA 611
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VAC 149
G +S + +G Q EG D + +P + + + V
Sbjct: 612 GHGYSLFLVDTEDFQPGLYYSGRQDRAEG--DTLPENPSGTTTPVLLSCSKLGYISRVTA 669
Query: 150 GSRHTLALCDDN 161
G LAL D N
Sbjct: 670 GKDSYLALVDKN 681
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Query: 20 PSRMDHFLD----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P + FL+ + + ++CG LT GI+ ++G+GS G LG+ + +P+
Sbjct: 385 PQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGH--GNFNDVTQPK 442
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD----PHPM 131
+ AL G +VQ+S G H A T + +++WG + G++G L D P +
Sbjct: 443 IVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLG------LATQDSHNCPQQV 496
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
S DF++Q V CG ++ + + + CG N +N+L +
Sbjct: 497 SLPADFEAQR-----VLCGVDCSMIMSTQHQILACGNNRFNKLGL 536
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 23/172 (13%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ L + ++CG H LA+T E VFSWG G G+LG + D++ P+++
Sbjct: 441 PKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQ--DSHNCPQQVSL 498
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW------ 133
+ ++ G S + + A G N ++G LD V P S+
Sbjct: 499 PADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLG----LDKVSGTEEPSSFCQVEEV 554
Query: 134 -------SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
S +++ I +D+ G+ H++A+ + + G N++ QL GC
Sbjct: 555 HLFQLVQSAPLNTEKIVYIDI--GTAHSVAVTEKGQCFTFGSNQHGQL--GC 602
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
+T ACG LA+ EG V++WG G+RG+LG
Sbjct: 620 ITMAACGDAFTLAIGAEGEVYTWGKGARGRLG 651
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG-----LGVVQI 88
+A G DH +ALT G V++WGNG + QLG +E R ++ L+ ++ +
Sbjct: 231 LATGTDHIIALTTTGKVYTWGNGQQFQLGR------RMLERRRLQGLTPQPLALKNIISV 284
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD---LVVHDPHPMSWSEDFDSQNIKVV 145
AG +HS A G +YAWG N Q G+E + + V+ P + E ++ ++I
Sbjct: 285 GAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSI--- 341
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
G HTLAL +D + G ++ +QL +
Sbjct: 342 --TGGEHHTLALLEDGRVLAWGRDDRHQLGI 370
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN---MEPREIRALSGLGVVQ 87
+ + G H A+ +G V++WG Q G + +P + AL G V
Sbjct: 281 IISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKS 340
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL--DLVVHDPHPMSW---SEDFDSQNI 142
I+ G H+ A +DG + AWG ++ Q+G+ + VV D ++ +
Sbjct: 341 ITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLT 400
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
V+ V CG+ H LA+ D ++ G E ++ G V+V T
Sbjct: 401 NVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPT 445
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM--- 72
V P+ +D V I G H LAL ++G V +WG R QLG P + +
Sbjct: 323 VITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKD 382
Query: 73 ---------EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
P I L+ V+Q+ G H+ A T DG +Y+WG +VG
Sbjct: 383 EKGNNYYLSTPTIIPGLT--NVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVG 433
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 20 PSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGYPSSGTDANMEPRE 76
PS+++ L L VT + C + A+T G F+WG S G LGY S EP +
Sbjct: 164 PSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGY-SDSQKRTAEPTQ 222
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE--GKLDLVVHDPHPMSWS 134
+R + Q++ G H A T G +Y WG Q+G + L P P++
Sbjct: 223 MRLPE---ICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALK 279
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
++ V GS H+ A+ + ++ G N ++ CG+
Sbjct: 280 --------NIISVGAGSYHSFAIDNKGRVYAWGLN----ITRQCGI 313
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPR--EIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
V+ +G+GS +LG D PR I + +GVV ++ GG HSAA + DG +Y W
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 108 GWNNGGQVG 116
G N+ +G
Sbjct: 133 GVNDDYALG 141
Score = 33.9 bits (76), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR--ALSGLGVVQI 88
V + CG H LA+T +G V+SWG+ ++G + D + P +R A+ + +
Sbjct: 402 VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAV-PTLVRSKAIKEVAIRVA 460
Query: 89 SAGGWHS 95
AGG S
Sbjct: 461 GAGGQFS 467
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 64/161 (39%), Gaps = 25/161 (15%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG-TDANME----------PREIR- 78
V D+A G H AL+ +G V++WG LG + D N + P ++
Sbjct: 110 VVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEG 169
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD--LVVHDPHPMSWSED 136
ALS L V ++ +AA T +G + WG GV G D +P M E
Sbjct: 170 ALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSD-GVLGYSDSQKRTAEPTQMRLPE- 227
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +A G+ H +AL ++ W Q +G
Sbjct: 228 -------ICQLATGTDHIIALTTTGKVY--TWGNGQQFQLG 259
>sp|Q5BIW4|ALS2_PANTR Alsin OS=Pan troglodytes GN=ALS2 PE=2 SV=1
Length = 1657
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGY-PSSGTDANMEPRE 76
P R+ + V A G H + LT++G V+S+G G + PSS N
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPILEN----- 86
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
AL G VV ++ G +HS A T +G Y WG N+ GQ V + V +P+P+S ++
Sbjct: 87 --ALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQ--YVPEPNPVSIADS 142
Query: 137 FDSQ--NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
S ++++ +ACG HTLAL +W G GC + ++ ++ P+
Sbjct: 143 EASPLLAVRILQLACGEEHTLALSISREIWAWG--------TGCQLGLITTAFPVTKPQK 194
Query: 195 VKN 197
V++
Sbjct: 195 VEH 197
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+V+T G L + V++WG G GQLG+ ++P ++ L G V+ +
Sbjct: 507 VVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGH--GDVLPRLQPLCVKCLDGKEVIHL 564
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVG 116
AGG+HS A T +Y+WG N GQ+G
Sbjct: 565 EAGGYHSLALTAKSQVYSWGSNTFGQLG 592
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANMEPREIRALSGLGV 85
V +A G H A+T G+ + WG S GQ Y ++ E L + +
Sbjct: 93 VVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRI 152
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+Q++ G H+ A + ++AWG G Q+G+ + P++ + + +VV
Sbjct: 153 LQLACGEEHTLALSISREIWAWG--TGCQLGL-------ITTAFPVTKPQKVEHLAGRVV 203
Query: 146 -DVACGSRHTLAL 157
VACG+ H+LAL
Sbjct: 204 LQVACGAFHSLAL 216
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
S L + + +ACG +H LAL+ +++WG G QLG ++ +P+++ L
Sbjct: 142 SEASPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVT-KPQKVEHL 198
Query: 81 SGLGVVQISAGGWHSAARTQ 100
+G V+Q++ G +HS A Q
Sbjct: 199 AGRVVLQVACGAFHSLALVQ 218
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G H LALT + V+SWG+ + GQLG+ T PR + S GV ++A
Sbjct: 561 VIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV---PRLAKISSENGVWSVAA 617
Query: 91 GGWHS 95
G +S
Sbjct: 618 GRDYS 622
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ V ++CG D + +T EG ++S+G+ G LG S +EP
Sbjct: 396 YRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLL 455
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ V Q+S G H A T+ +Y+WG G++G++ + D V+ P +
Sbjct: 456 VDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDD--VYSPQKVEV--- 510
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ + +V+V CGS + L + CG NE+N+L +
Sbjct: 511 --QRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGL 548
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 23/167 (13%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP--SSGTDANMEPR 75
+ P +++ L + ++ CG D LT G V + G +LG ++G + +
Sbjct: 503 YSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQ 562
Query: 76 EI---------RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVV 125
E+ + LS + IS G H+AA + G L +G N GQ+GV + + L +
Sbjct: 563 EVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGI 622
Query: 126 H-DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN 169
+ P+ + V+ V+CG T A DN + WG G N
Sbjct: 623 NLLGGPLGGKQ--------VIRVSCGDEFTTAATADNHIFAWGNGGN 661
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS----GTDANME-PREIRALSGLGV 85
V ++CG + A T + +F+WGNG G+L + G+D PR I S V
Sbjct: 634 VIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFG-SLHHV 692
Query: 86 VQISAGGWHS 95
+S GWH+
Sbjct: 693 TDLSCRGWHT 702
>sp|Q96Q42|ALS2_HUMAN Alsin OS=Homo sapiens GN=ALS2 PE=1 SV=2
Length = 1657
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGY-PSSGTDANMEPRE 76
P R+ + V A G H + LT++G V+S+G G + PSS N
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPILEN----- 86
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
AL G V+ ++ G +HS A T +G Y WG N+ GQ V + V +P+P+S ++
Sbjct: 87 --ALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQ--YVPEPNPVSIADS 142
Query: 137 FDSQ--NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
S ++++ +ACG HTLAL +W G GC + ++ ++ P+
Sbjct: 143 EASPLLAVRILQLACGEEHTLALSISREIWAWG--------TGCQLGLITTAFPVTKPQK 194
Query: 195 VKN 197
V++
Sbjct: 195 VEH 197
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+V+T G L + V++WG G GQLG+ ++P ++ L G V+ +
Sbjct: 507 VVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGH--GDVLPRLQPLCVKCLDGKEVIHL 564
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVG 116
AGG+HS A T +Y+WG N GQ+G
Sbjct: 565 EAGGYHSLALTAKSQVYSWGSNTFGQLG 592
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANMEPREIRALSGLGV 85
V +A G H A+T G+ + WG S GQ Y ++ E L + +
Sbjct: 93 VITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRI 152
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+Q++ G H+ A + ++AWG G Q+G+ + P++ + + +VV
Sbjct: 153 LQLACGEEHTLALSISREIWAWG--TGCQLGL-------ITTAFPVTKPQKVEHLAGRVV 203
Query: 146 -DVACGSRHTLAL 157
VACG+ H+LAL
Sbjct: 204 LQVACGAFHSLAL 216
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
S L + + +ACG +H LAL+ +++WG G QLG ++ +P+++ L
Sbjct: 142 SEASPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVT-KPQKVEHL 198
Query: 81 SGLGVVQISAGGWHSAARTQ 100
+G V+Q++ G +HS A Q
Sbjct: 199 AGRVVLQVACGAFHSLALVQ 218
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G H LALT + V+SWG+ + GQLG+ T PR + S GV I+A
Sbjct: 561 VIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV---PRLAKISSENGVWSIAA 617
Query: 91 GGWHS 95
G +S
Sbjct: 618 GRDYS 622
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 68.2 bits (165), Expect = 5e-11, Method: Composition-based stats.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ G + ALT++G +F WG+ S GQ+G + P+++ G V IS
Sbjct: 142 IKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVC--VPQQVTI--GKPVSWISC 197
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HSA T DG LY +G G++G+ +L P +S + KV+ VACG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE------KVIQVACG 251
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
HT+ L +N+++ G ++ QL +G + + S
Sbjct: 252 GEHTVVLT-ENAVYTFGLGQFGQLGLGTFLFETS 284
Score = 60.1 bits (144), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 28/151 (18%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL-----SGLGVVQIS 89
ACG +H L T+ G V++ G + GQLG + E R + S + Q+S
Sbjct: 93 ACGRNHTLVSTEGGNVYATGGNNEGQLGL------GDTEERNTFHVISFFTSEHKIKQLS 146
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP----HPMSWSEDFDSQNIKVV 145
AG SAA T+DG L+ WG N+ GQ+G++ ++ V P+SW
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW------------ 194
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
++CG H+ + D L+ G E +L +
Sbjct: 195 -ISCGYYHSAFVTTDGELYVFGEPENGKLGL 224
Score = 55.1 bits (131), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V+ I+CG+ H +T +G ++ +G G+LG P+ + P+ + + V+Q++
Sbjct: 192 VSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVAC 250
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ T++ +Y +G GQ+G+ G +P + E+ Q I + +CG
Sbjct: 251 GGEHTVVLTENA-VYTFGLGQFGQLGL-GTFLFETSEPKVI---ENIRDQTISYI--SCG 303
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
HT + D ++ G + +L +G
Sbjct: 304 ENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV 85
F + V ++CG +H +T ++ +G+ + GQLG S A +P ++AL V
Sbjct: 32 FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK--SAISKPTCVKALKPEKV 89
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+ G H+ T+ G +YA G NN GQ+G+ + + H +S+ F S++ K+
Sbjct: 90 KLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEER--NTFHVISF---FTSEH-KIK 143
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
++ GS + AL +D L+ G N Q+ + VS V V ++++ + V
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLK-NVSNVCVPQQVTIGKPV 192
Score = 35.8 bits (81), Expect = 0.28, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
P +++ D ++ I+CG +H +T G+++++G+G G+LG
Sbjct: 286 PKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLG 328
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 68.2 bits (165), Expect = 5e-11, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 16/171 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ G + ALT++G +F WG+ S GQ+G + T+ + P+++ G + IS
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV-TNVCV-PQQVTV--GKPISWISC 197
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD-PHPMSWSEDFDSQNIKVVDVAC 149
G +HSA T +G LY +G G++G+ +L LV H P P+ KVV VAC
Sbjct: 198 GYYHSAFVTTEGQLYTFGEPECGKLGLPNQL-LVNHRMPQPVPGIPG------KVVQVAC 250
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPI 200
G HT+ L + +++ G ++ QL +G + + SV + EH+K+ I
Sbjct: 251 GGGHTVVLT-EKAVYTFGLGQFGQLGLGTFLFETSVPKAI---EHIKDQKI 297
Score = 57.8 bits (138), Expect = 8e-08, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+CG+ H +T EG ++++G G+LG P+ + P+ + + G VVQ++ GG
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGG 253
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ T+ +Y +G GQ+G+ G P + +D K+ +ACG H
Sbjct: 254 HTVVLTEKA-VYTFGLGQFGQLGL-GTFLFETSVPKAIEHIKD-----QKISFIACGENH 306
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
T + D ++ G + +L +G
Sbjct: 307 TALITDMGLMYTFGDGRHGKLGLG 330
Score = 56.2 bits (134), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++PS+ F + V T ++CG +H +T ++ +G+ + GQLG S T + +P +
Sbjct: 25 NIPSKF-WFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS--KPTCV 81
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+AL V + G H+ T+ G +YA G NN GQ+G+ + H +S+ F
Sbjct: 82 KALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTF--HLISF---F 136
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK- 196
SQ K+ ++ GS + AL +D L+ G N Q+ G+ V T + VP+ V
Sbjct: 137 TSQR-KIKQLSAGSNTSAALTEDGELFMWGDNSEGQI----GLENV---TNVCVPQQVTV 188
Query: 197 NCPIVKLFAEHWNSA 211
PI + +++SA
Sbjct: 189 GKPISWISCGYYHSA 203
Score = 41.6 bits (96), Expect = 0.005, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++H D ++ IACG +H +T G+++++G+G G+LG + P
Sbjct: 285 VPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCS 344
Query: 79 ALSGLGVVQISAGGWHS 95
V +S GG H+
Sbjct: 345 NFLRFIVQLVSCGGCHT 361
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 24/149 (16%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV-QISAGGW 93
ACG +H L T G V++ G + GQLG TD +I + + Q+SAG
Sbjct: 93 ACGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGAN 150
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH------PMSWSEDFDSQNIKVVDV 147
SAA T+DG L+ WG N+ GQ+G+E K ++ + PH P+SW +
Sbjct: 151 TSAALTEDGKLFMWGDNSEGQIGLEDKSNVCI--PHEVTVGKPISW-------------I 195
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+CG H+ + D L+ G E +L +
Sbjct: 196 SCGYYHSAFVTMDGELYTFGEPENGKLGL 224
Score = 64.7 bits (156), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ G + ALT++G +F WG+ S GQ+G P E+ G + IS
Sbjct: 142 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVC--IPHEVTV--GKPISWISC 197
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HSA T DG LY +G G++G+ +L + P + + +V+ VACG
Sbjct: 198 GYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE------RVIQVACG 251
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
HT+ L + ++ G ++ QL +G + + S
Sbjct: 252 GGHTVVLT-EKVVYAFGLGQFGQLGLGTFLFETS 284
Score = 56.2 bits (134), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+CG+ H +T +G ++++G G+LG P+ + P+ + + V+Q++ GG
Sbjct: 195 ISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPER-VIQVACGGG 253
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ T+ +YA+G GQ+G+ G +P + +D K+ ++CG H
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGL-GTFLFETSEPKIIERIKD-----QKICHISCGENH 306
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
T + + L+ G + +L +G
Sbjct: 307 TALMTELGLLYTFGDGRHGKLGLG 330
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG H + LT E +V+++G G GQLG + + + EP+ I + + IS
Sbjct: 245 VIQVACGGGHTVVLT-EKVVYAFGLGQFGQLGLGTFLFETS-EPKIIERIKDQKICHISC 302
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGV 117
G H+A T+ G LY +G G++G+
Sbjct: 303 GENHTALMTELGLLYTFGDGRHGKLGL 329
Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++CG +H +T ++ +G+ + GQLG S A ++P I+AL V + G
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKA--AIIKPTCIKALKPEKVKLAACGRN 97
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ T G +YA G NN GQ+G+ D H + + D+ + ++ G+
Sbjct: 98 HTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF--HQIVFFTPADT----IKQLSAGANT 151
Query: 154 TLALCDDNSLWGCGWNEYNQLSM 176
+ AL +D L+ G N Q+ +
Sbjct: 152 SAALTEDGKLFMWGDNSEGQIGL 174
Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+S G H+A T + LY +G NN GQ+G+ K ++ P + + + +K+
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII----KP-TCIKALKPEKVKLA-- 92
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
ACG HTL D ++ G N QL +G
Sbjct: 93 ACGRNHTLVSTDTGGVYAAGGNNEGQLGLG 122
Score = 37.0 bits (84), Expect = 0.13, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 34/75 (45%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + I+CG +H +T+ G+++++G+G G+LG P
Sbjct: 286 PKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSN 345
Query: 80 LSGLGVVQISAGGWH 94
V I+ GG H
Sbjct: 346 FLRFAVQLIACGGCH 360
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 11 KMLSQVFHMPSRMDHFLDLVVTDIACG--FDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
+ L Q P R + V +A G H L +T EG ++SWG +GQLG+ G
Sbjct: 121 RNLGQNLWGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGH---GD 177
Query: 69 DANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
++ P+ I +L G V + G H+ A T++G +YA+G N GQ+G+ K D V
Sbjct: 178 IKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAV--- 234
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P P ++ Q I VACG+ ++ + +L+ G EY QL
Sbjct: 235 PSPAQIL--YNGQPI--TKVACGAEFSMIMDCKGNLYSFGCPEYGQL 277
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS--GLGV 85
++VV DIACG +H L L + VFSWG G G+LG+ S M PR ++ G G
Sbjct: 320 NVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGH--SEQRDEMVPRLVKLFDFPGRGA 377
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNN 111
QI AG S A ++ G L+ WG N
Sbjct: 378 AQIYAGATCSFAVSEMGGLFFWGATN 403
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 21/174 (12%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ V ACG +H LALT+ G V+++G GQLG + TDA P +I
Sbjct: 183 VPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGL-GNKTDAVPSPAQI- 240
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-------------VEGKLDLVV 125
+G + +++ G S G LY++G GQ+G +E +L+
Sbjct: 241 LYNGQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIA 300
Query: 126 HDPHPMSWSEDFDSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + D Q N+ V D+ACG H+L L ++ G+ Y +L
Sbjct: 301 RR-IAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRL 353
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 74 PREIRALSGLGVVQISAG--GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P L+G+ V +++G HS T +G L++WG N+ GQ+G D +
Sbjct: 130 PHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGH--------GDIKRI 181
Query: 132 SWSEDFDSQNIKV-VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +S +V V ACG HTLAL ++ S++ G N+ QL +G
Sbjct: 182 DVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLG 228
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 7/160 (4%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ + ++CG D + +T EG ++++G+ G +G +EP +
Sbjct: 414 YRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQ 473
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ V Q+S G H T++ +Y+WG G++G++ + D + P +
Sbjct: 474 LNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY--YTPQKVDV--- 528
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ + +V V CG T L + CG NE+N+L +
Sbjct: 529 --PKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGL 566
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS--SGTDANMEP 74
++ P ++D L++ + CG D LTQ G V + G +LG SG +
Sbjct: 520 YYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAY 579
Query: 75 REI---------RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLD 122
E+ + LS + I+ G H+AA + G L +G N GQ+GV + +L
Sbjct: 580 HEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG 639
Query: 123 LVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN 169
+ + P+ + V+ V+CG T+A DDN + WG G N
Sbjct: 640 INLLG-GPLGGKQ--------VIRVSCGDEFTIAATDDNHIFAWGNGGN 679
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR-EIRALSG-LG---V 85
+ IA G H A+ + G + ++G GQLG N + R I L G LG V
Sbjct: 599 IRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGV------GNYKKRLGINLLGGPLGGKQV 652
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHP----MSWSEDFDSQ 140
+++S G + A T D ++AWG NGG G+L + PH SW
Sbjct: 653 IRVSCGDEFTIAATDDNHIFAWG--NGGN----GRLAMTPTERPHGSDICTSWPRPIFGS 706
Query: 141 NIKVVDVACGSRHTLALCD 159
V D++C HT+ + +
Sbjct: 707 LHHVPDLSCRGWHTILIVE 725
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 20 PSRMDHFLD----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P + FL+ + + +ACG LT GI+ ++G+GS G LG+ S TD + +P
Sbjct: 378 PQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGH-GSLTDIS-QPT 435
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ AL G +VQ++ G H A + + L+AWG + G++G+ + PM +
Sbjct: 436 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQ 495
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ V CG ++ L CG N +N+L +
Sbjct: 496 EAQR-------VVCGIDSSMILTVPGQALACGSNRFNKLGL 529
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
L G L +SQ P+ ++ L + +ACG H LAL+ E +F+WG G G+LG
Sbjct: 423 LGHGSLTDISQ----PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLG 478
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV 124
+ +++ P+++ G ++ G S T G A G N ++G++ L L
Sbjct: 479 TR--ESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLD-HLSL- 534
Query: 125 VHDPHPMSWSED-----------FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
+P P E+ D + + +D+ G+ H+ A+ + G N++ Q
Sbjct: 535 GEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDL--GTAHSAAVTASGDCYTFGSNQHGQ 592
Query: 174 L 174
L
Sbjct: 593 L 593
Score = 38.5 bits (88), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 75/192 (39%), Gaps = 24/192 (12%)
Query: 2 CDHLASGPLKM-----LSQVFH------MPSRMDHFLDLVVTDIACGFDHCLALTQEGIV 50
C + GP++ LS V+ P R+ L+ V +A G +T+ G +
Sbjct: 295 CRGIPRGPVRPAIPPPLSSVYAWGGGLGTPLRLP-MLNTEVVQVAAGRTQKAGVTRSGRL 353
Query: 51 FSW-----GNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
W G G L R + SG+ + ++ G + +A T G +
Sbjct: 354 ILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIM 413
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
+G + G +G D + P + ++ +V VACG+ H LAL + L+
Sbjct: 414 TFGSGSNGCLGHGSLTD--ISQPTIVEALLGYE-----MVQVACGASHVLALSTERELFA 466
Query: 166 CGWNEYNQLSMG 177
G + +L +G
Sbjct: 467 WGRGDSGRLGLG 478
Score = 37.7 bits (86), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLG--YPSSGTDA--NMEPREIRALSGLG----- 84
+ CG D + LT G + G+ +LG + S G + + + E + + LG
Sbjct: 500 VVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLD 559
Query: 85 ---VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
++ I G HSAA T G Y +G N GQ+G + P + E
Sbjct: 560 QEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRG--SRAPCKVQGLE-----G 612
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
IK+ VACG T+A+ ++ ++ G +L
Sbjct: 613 IKMAMVACGDAFTVAIGAESEVYSWGKGARGRL 645
Score = 34.3 bits (77), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
P ++ + + +ACG +A+ E V+SWG G+RG+LG
Sbjct: 604 PCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLG 646
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 23/190 (12%)
Query: 6 ASGP-----LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNG--S 57
+SGP L+ ++ +P R++ LD ++ ACG+ L ++ + + WG G
Sbjct: 78 SSGPGPRAGLRPRRRIQPVPYRLE--LDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNK 135
Query: 58 RGQLGYPSSGTDAN------MEPREIR----ALSGLGVVQISAGGWHSAARTQDGFLYAW 107
QLG+ S D +EP + V+Q+S G HS T +++
Sbjct: 136 DSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSM 195
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G N+ GQ G + D V + H + +DFD Q VV V CG H+L L D ++ CG
Sbjct: 196 GNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQ---VVQVVCGQDHSLFLTDKGEVYSCG 252
Query: 168 WNEYNQLSMG 177
W Q +G
Sbjct: 253 WGADGQTGLG 262
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +D + V ++CG H L LT VFS GN S GQ G + E ++
Sbjct: 161 VPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVH 220
Query: 79 ALSGLG--VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ VVQ+ G HS T G +Y+ GW GQ G+ G + + P +
Sbjct: 221 RMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGL-GHYN-ITSTPSKLGG--- 275
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
D + VV VA LAL D ++G G +EY QL+ +QV+V
Sbjct: 276 -DLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNV 323
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 17/170 (10%)
Query: 16 VFHMPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+ PS++ L + V +A D CLAL+ +G VF WGN QL + T N+ P
Sbjct: 266 ITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNV-P 324
Query: 75 REIRALSGLG-VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK----LDLVVHD-- 127
R + SG+G V Q++ GG A +G ++ WG+ G+ GK L+ + +
Sbjct: 325 RCL-PFSGVGKVKQVACGGTGCAVLNAEGHVFVWGY------GILGKGPKLLETAIPEMI 377
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P + +F+ + ++V + CG H AL + L+ G N L +G
Sbjct: 378 PPTLFGLTEFNPE-VQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIG 426
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 56/131 (42%), Gaps = 13/131 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VV 86
V +ACG C L EG VF WG G G+ M P + L+ V
Sbjct: 335 VKQVACGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVS 394
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QI G H AA T G L+ WG N G +G+ G+L+ D + W + VD
Sbjct: 395 QIRCGLSHFAALTNKGELFVWGKNIRGCLGI-GRLE----DQY-FPWRVTMPGEP---VD 445
Query: 147 VACGSRHTLAL 157
VACG H + L
Sbjct: 446 VACGVDHMVTL 456
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 58/153 (37%), Gaps = 37/153 (24%)
Query: 50 VFSWGNGSRGQLGYPS-------SGTDANMEPREI---------------RALSGLGVVQ 87
VF WG G LG PS G A + PR A G G
Sbjct: 58 VFVWGFSFSGALGVPSFVVPSSGPGPRAGLRPRRRIQPVPYRLELDHKISSAACGYGFTL 117
Query: 88 ISAGGWHSAARTQD-GFLYAWGWNNGGQVGV-EGKLDLV-----VHDPHPMSWSEDFDSQ 140
+S ++T+D ++ G N Q+G + D V +P P+ D Q
Sbjct: 118 LS-------SKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLD-RPQ 169
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
KV+ V+CG H+L L D ++ G N + Q
Sbjct: 170 ETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQ 202
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 7/160 (4%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ + ++CG D + +T EG ++++G+ G +G +EP +
Sbjct: 414 YRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQ 473
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ V Q+S G H T++ +Y+WG G++G++ + D + P +
Sbjct: 474 LNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY--YTPQRVDV--- 528
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ + +V V CG T L + CG NE+N+L +
Sbjct: 529 --PKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGL 566
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS--SGTDANMEP 74
++ P R+D L++ + CG D LTQ G V + G +LG SG +
Sbjct: 520 YYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAY 579
Query: 75 REI---------RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLD 122
E+ + LS + I+ G H+AA + G L +G N GQ+GV + +L
Sbjct: 580 HEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG 639
Query: 123 LVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN 169
+ + P+ + V+ V+CG T+A DDN + WG G N
Sbjct: 640 INLLG-GPLGGKQ--------VIRVSCGDEFTIAATDDNHIFAWGNGGN 679
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR-EIRALSG-LG---V 85
+ IA G H A+ + G + ++G GQLG N + R I L G LG V
Sbjct: 599 IRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGV------GNYKKRLGINLLGGPLGGKQV 652
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHP----MSWSEDFDSQ 140
+++S G + A T D ++AWG NGG G+L + PH SW
Sbjct: 653 IRVSCGDEFTIAATDDNHIFAWG--NGGN----GRLAMTPTERPHGSDICTSWPRPIFGS 706
Query: 141 NIKVVDVACGSRHTLALCD 159
V D++C HT+ + +
Sbjct: 707 LHHVPDLSCRGWHTILIVE 725
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAAR 98
H L +T EG ++SWG +GQLG+ G +E PR I ALS +V + G H+ A
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGH---GDTKRVEAPRLIEALSHEAIVLAACGRNHTLAL 215
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T G ++A+G N GQ+G+ + D V P P ++ Q I +ACG+ ++ +
Sbjct: 216 TDTGSVFAFGENKMGQLGLGNQTDAV---PSPAQIM--YNGQPI--TKMACGAEFSMLMD 268
Query: 159 DDNSLWGCGWNEYNQL 174
+L+ G EY QL
Sbjct: 269 CKGNLYSFGCPEYGQL 284
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++ P ++ + ACG +H LALT G VF++G GQLG + TDA
Sbjct: 185 TKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGL-GNQTDAVPS 243
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKL----DLVVHD 127
P +I +G + +++ G S G LY++G GQ+G +GK + +D
Sbjct: 244 PAQI-MYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYD 302
Query: 128 ----PHPMS--WSEDFDSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P ++ + D Q N+ V DVACG+ HTL L ++ G+ Y +L
Sbjct: 303 CELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRL 360
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA--LSGLGV 85
++VV D+ACG +H L L + VFSWG G G+LG+ + M PR ++ G G
Sbjct: 327 NVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE--MVPRLVKLFDFPGRGA 384
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNN 111
QI AG S A ++ G L+ WG N
Sbjct: 385 TQIYAGYTCSFAVSEVGGLFFWGATN 410
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 74 PREIRALSGLGVVQISAG--GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P LSG+ V + +G HS T +G L++WG N GQ+G G V
Sbjct: 137 PHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLG-HGDTKRVEAPRLIE 195
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ S + +V ACG HTLAL D S++ G N+ QL +G
Sbjct: 196 ALSHE------AIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLG 235
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACG--FDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
+ L Q P R D+ V+ + G H L +T EG ++SWG +GQLG+ G
Sbjct: 102 FRNLGQNLWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGH---G 158
Query: 68 TDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
+E P+ I L +V + G H+ A T++G +Y +G N GQ+G + D V+
Sbjct: 159 DTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVL- 217
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P + ++ +V VACG+ ++ + +L+ G EY QL
Sbjct: 218 SPATIQYN------GQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQL 259
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 25/181 (13%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++ P ++ + V+ ACG +H LALT+ G V+++G GQLG + TDA +
Sbjct: 160 TKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQ-GNQTDAVLS 218
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-------------VEGK 120
P I+ +G +V+++ G S G LY++G GQ+G +E
Sbjct: 219 PATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFD 277
Query: 121 LDLVVHDPHPMS--WSEDFDSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
+L+ P ++ + D Q N+ DVACG+ HTL L ++ G+ Y +
Sbjct: 278 CELI---PRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGR 334
Query: 174 L 174
L
Sbjct: 335 L 335
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS--GLGV 85
++V D+ACG +H L L + VFSWG G G+LG+ + M PR ++ G G
Sbjct: 302 NVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE--MVPRLVKLFDFPGRGA 359
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
QI G S A ++ G L+ WG N + +P + D K+
Sbjct: 360 TQIYCGYQCSFALSEMGGLFFWGVTNTSRESTM----------YPKAVQ---DLCGWKIR 406
Query: 146 DVACGSRHTLALCDDNSL-WG 165
+ACG + DD+++ WG
Sbjct: 407 SLACGKSSIIVAADDSTISWG 427
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS T +G L++WG N+ GQ+G G + E+ +V ACG H
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLG-HGDTKRLEAPKLIEGLGEEV------IVAAACGRNH 186
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
TLAL ++ +++ G N+ QL G
Sbjct: 187 TLALTENGTVYTFGENKLGQLGQG 210
>sp|P52499|RCC1_CANAX Protein RCC1 OS=Candida albicans GN=RCC1 PE=3 SV=1
Length = 464
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-----MEPREIRALSGLGV 85
+ IA G HC A+ V++WG GQ + M+P I LS G+
Sbjct: 253 IKYIASGDFHCFAIDHSHNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKGI 312
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG----KLDLVVHDPHPMSWSEDFDSQN 141
+I+AG H+ A T+DG +YAWG + ++G+ K ++ S+S +
Sbjct: 313 KEIAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKINTGTHGSFSFLQNLFA 372
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+K+ + GS H+ A+ +D ++ G+ E +G + V TR+
Sbjct: 373 VKIKTIGVGSHHSFAVTEDGVVYAWGFAETYGPGLGPSIDDVEKPTRI 420
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 50 VFSWGNGSRGQLGY-PSSGTDANMEPR-----EIRALSGLGVVQISAGGWHSAARTQDGF 103
VF WG GS +LG PS+ PR L G +V + GG H+ A
Sbjct: 26 VFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGMHTLALDGKNR 85
Query: 104 LYAWGWNNGGQVG 116
+++WG N+ +G
Sbjct: 86 IWSWGGNDSEVLG 98
Score = 32.0 bits (71), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
D L K+ + S + + + + I G H A+T++G+V++WG G
Sbjct: 347 DKLPKSTFKINTGTHGSFSFLQNLFAVKIKTIGVGSHHSFAVTEDGVVYAWGFAETYGPG 406
Query: 63 YPSSGTDANMEPREIR-ALSGLGVVQISAGGWHSAA 97
S D R + A ++ I AGG S +
Sbjct: 407 LGPSIDDVEKPTRIVNTATKNEDILLIGAGGQFSVS 442
Score = 30.8 bits (68), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNE 170
K+VD A G HTLAL N +W G N+
Sbjct: 66 KIVDFAVGGMHTLALDGKNRIWSWGGND 93
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAAR 98
H L +T EG ++SWG +GQLG+ G +E PR I LS +V + G H+ A
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGH---GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLAL 217
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T+ G ++A+G N GQ+G+ + D V P P ++ Q I +ACG+ ++ +
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTDAV---PSPAQIM--YNGQPI--TKMACGAEFSMIMD 270
Query: 159 DDNSLWGCGWNEYNQL 174
+L+ G EY QL
Sbjct: 271 CKGNLYSFGCPEYGQL 286
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
++ P ++ V+ ACG +H LALT+ G VF++G GQLG + TDA
Sbjct: 187 TKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGL-GNQTDAVPS 245
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKL----DLVVHD 127
P +I +G + +++ G S G LY++G GQ+G +GK + +D
Sbjct: 246 PAQI-MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYD 304
Query: 128 ----PHPMS--WSEDFDSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P ++ + D Q N+ V DVACG+ HTL L ++ G+ Y +L
Sbjct: 305 CELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRL 362
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS--GLGV 85
++VV D+ACG +H L L + VFSWG G G+LG+ + M PR ++ G G
Sbjct: 329 NVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE--MVPRLVKLFDFPGRGA 386
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNN 111
QI AG S A ++ G L+ WG N
Sbjct: 387 SQIYAGYTCSFAVSEVGGLFFWGATN 412
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 74 PREIRALSGLGVVQISAG--GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P L+G+ V + +G HS T +G L++WG N GQ+G G V
Sbjct: 139 PHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLG-HGDTKRVEAPRLIE 197
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S + +V ACG HTLAL + S++ G N+ QL +G
Sbjct: 198 GLSHEV------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLG 237
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 30/178 (16%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFS-WGNG--SRGQLGYPSSGTDANM--- 72
+P R++ LD ++ ACG+ L ++ V WG G QLG+ S D
Sbjct: 99 VPYRLE--LDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYE 156
Query: 73 -------------EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG 119
P+E R V+Q+S G HS T +++ G N+ GQ G +
Sbjct: 157 YVLEPSPVSLPLDRPQETR------VLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKV 210
Query: 120 KLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + + H + +DFD Q VV VACG H+L L D ++ CGW Q +G
Sbjct: 211 VENEIYSESHRVHRMQDFDGQ---VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLG 265
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 23 MDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG 82
+D + V ++CG H L LT VFS GN S GQ G + E + +
Sbjct: 168 LDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQD 227
Query: 83 LG--VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ 140
VVQ++ G HS T G +Y+ GW GQ G+ G + + P + D
Sbjct: 228 FDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGL-GHYN-ITSSPTKLGG----DLA 281
Query: 141 NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
+ V+ VA LA+ D L+G G +EY QL+ +QV+V
Sbjct: 282 GVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNV 326
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV-QIS 89
V +A D CLA++ +G +F WGN QL + T N+ PR + SG+G V Q +
Sbjct: 285 VIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNV-PRCLH-FSGVGKVRQAA 342
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD------PHPMSWSEDFDSQNIK 143
GG A +G ++ WG+ G+ GK +V P + +F+ + I+
Sbjct: 343 CGGTGCAVLNGEGHVFVWGY------GILGKGPNLVESAVPEMIPPTLFGLTEFNPE-IQ 395
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V + CG H AL + L+ G N L +G
Sbjct: 396 VSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIG 429
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 55/131 (41%), Gaps = 13/131 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VV 86
V ACG C L EG VF WG G G+ M P + L+ V
Sbjct: 338 VRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVS 397
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
+I G H AA T G L+ WG N G +G+ G+L+ D + W + VD
Sbjct: 398 RIRCGLSHFAALTNKGELFVWGKNIRGCLGI-GRLE----DQY-FPWRVTMPGEP---VD 448
Query: 147 VACGSRHTLAL 157
VACG H + L
Sbjct: 449 VACGVDHMVTL 459
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
++ V+ I CG H ALT +G +F WG RG LG
Sbjct: 393 EIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLG 427
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 59/152 (38%), Gaps = 35/152 (23%)
Query: 50 VFSWGNGSRGQLGYPS-------------SGTDANMEPREIR---------ALSGLGVVQ 87
VF WG G LG PS + ++P R A G G
Sbjct: 61 VFVWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQKISSAACGYGFTL 120
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLV-----VHDPHPMSWSEDFDSQN 141
+S+ +A T+ ++ G N Q+G + D V +P P+S D Q
Sbjct: 121 LSS---KTADVTK---VWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLPLD-RPQE 173
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
+V+ V+CG H+L L D ++ G N Y Q
Sbjct: 174 TRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQ 205
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V G H + L+Q G V+S+G G LG +S + M P ++ VVQ+SA
Sbjct: 69 VVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSA 126
Query: 91 GGWHSAARTQDGFLYAWGW---NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
G H+AA T+DG ++ WG NN GV G L+ + P+ D VV V
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNN----GVIGLLEPMKKSMVPVQVQLD-----APVVKV 177
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQL 174
A G+ H + L +D L+ G E QL
Sbjct: 178 ASGNDHLVMLTNDGDLYTLGCGEQGQL 204
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 23/164 (14%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL--GVVQISAGGWHSAARTQDG 102
T+ G+V + G G GQLG S + R+ AL L VVQ AGG H+ +Q G
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGES-----VLERKKPALVPLLQDVVQAEAGGMHTVCLSQSG 86
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y++G N+ G +G + ++ P + E KVV V+ G HT AL +D
Sbjct: 87 QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE-------KVVQVSAGDSHTAALTEDGR 139
Query: 163 --LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-NCPIVKL 203
LWG + + N + + + M + VP V+ + P+VK+
Sbjct: 140 VFLWGS-FRDNNGV-----IGLLEPMKKSMVPVQVQLDAPVVKV 177
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY---------PSSGTDANMEPR-- 75
LD V +A G DH + LT +G +++ G G +GQLG G + PR
Sbjct: 170 LDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCV 229
Query: 76 EIRALSGLGVVQIS---AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+++ G V+ G + + A +++G +Y +G +N Q+G G + P ++
Sbjct: 230 LLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFI--PQNLT 287
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
F + V + G HT+ + + + G EY +L +G G + S+ T +S
Sbjct: 288 ---SFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS 342
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI--RALSGLGVV 86
VV+ +ACG A++++G VF+WG G+ QLG +G D + P E+ + L V+
Sbjct: 346 VVSSVACGASVGYAVSKDGRVFAWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVL 402
Query: 87 QISAGGWHSAARTQD 101
+S+GG H+ +D
Sbjct: 403 TVSSGGQHTVLLVKD 417
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G H + + EG +S G G+LG G + P I L V ++ G
Sbjct: 302 GQHHTVCMDSEGKAYSLGRAEYGRLGL-GEGAEEKSIPTLISRLPV--VSSVACGASVGY 358
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
A ++DG ++AWG Q+G D P M+ + +N V+ V+ G +HT+
Sbjct: 359 AVSKDGRVFAWGMGTNYQLGTGQDED--AWSPVEMTGKQ---LENRVVLTVSSGGQHTVL 413
Query: 157 LCDDNS 162
L D +
Sbjct: 414 LVKDQA 419
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V G H + L Q G V+S+G G LG +S + M P ++ VVQ+SA
Sbjct: 69 VVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSA 126
Query: 91 GGWHSAARTQDGFLYAWG--WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+AA T+DG ++ WG +N G +G+ L+ + P+ D + VV VA
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNNGVIGL---LEPMKKSMVPVQVQLD-----MPVVKVA 178
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
G+ H + L D L+ G E QL
Sbjct: 179 SGNDHLVMLTTDGDLYTLGCGEQGQL 204
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANME----PR-- 75
LD+ V +A G DH + LT +G +++ G G +GQLG + + G +E P+
Sbjct: 170 LDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV 229
Query: 76 EIRALSGLGVVQIS---AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+++ G V+ G + + A +++G +Y +G +N Q+G G + P ++
Sbjct: 230 LLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFI--PQNLT 287
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
F + V + G HT+ + + + G EY +L +G G + S+ T +S
Sbjct: 288 ---SFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS 342
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 23/164 (14%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL--GVVQISAGGWHSAARTQDG 102
T+ G+V + G G GQLG S + R+ AL L VVQ AGG H+ Q G
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLE-----RKKPALVPLLQDVVQAEAGGMHTVCLNQSG 86
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y++G N+ G +G + ++ P + E KVV V+ G HT AL +D
Sbjct: 87 QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE-------KVVQVSAGDSHTAALTEDGR 139
Query: 163 --LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-NCPIVKL 203
LWG + + N + + + M + VP V+ + P+VK+
Sbjct: 140 VFLWGS-FRDNNGV-----IGLLEPMKKSMVPVQVQLDMPVVKV 177
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI--RALSGLGVV 86
VV+ +ACG A++++G VF+WG G+ QLG +G D + P E+ + L V+
Sbjct: 346 VVSSVACGASVGYAVSKDGRVFAWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVL 402
Query: 87 QISAGGWHSAARTQD 101
+S+GG H+ +D
Sbjct: 403 TVSSGGQHTVLLVKD 417
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G H + + EG +S G G+LG G + P I L V ++ G
Sbjct: 302 GQHHTICMDSEGKAYSLGRAEYGRLGL-GEGAEEKSIPTLISRLPV--VSSVACGASVGY 358
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
A ++DG ++AWG Q+G D P M+ + +N V+ V+ G +HT+
Sbjct: 359 AVSKDGRVFAWGMGTNYQLGTGQDED--AWSPVEMTGKQ---LENRVVLTVSSGGQHTVL 413
Query: 157 LCDDN 161
L D
Sbjct: 414 LVKDK 418
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V G H + L++ G V+S+G G LG +S + M P ++ VVQ+SA
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSA 126
Query: 91 GGWHSAARTQDGFLYAWG--WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+AA T DG ++ WG +N G +G+ L+ + P+ D + VV VA
Sbjct: 127 GDSHTAALTDDGRVFLWGSFRDNNGVIGL---LEPMKKSMVPVQVQLD-----VPVVKVA 178
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
G+ H + L D L+ G E QL
Sbjct: 179 SGNDHLVMLTADGDLYTLGCGEQGQL 204
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 23/164 (14%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL--GVVQISAGGWHSAARTQDG 102
T+ G+V + G G GQLG N+ R+ AL + VVQ AGG H+ ++ G
Sbjct: 32 TEPGLVLTLGQGDVGQLGL-----GENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSG 86
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y++G N+ G +G + ++ P + E KVV V+ G HT AL DD
Sbjct: 87 QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE-------KVVQVSAGDSHTAALTDDGR 139
Query: 163 --LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-NCPIVKL 203
LWG + + N + + + M + VP V+ + P+VK+
Sbjct: 140 VFLWGS-FRDNNGV-----IGLLEPMKKSMVPVQVQLDVPVVKV 177
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANME----PR-- 75
LD+ V +A G DH + LT +G +++ G G +GQLG + + G +E P+
Sbjct: 170 LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV 229
Query: 76 EIRALSGLGVVQIS---AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+++ G V+ G + + A + +G +Y +G +N Q+G G + P ++
Sbjct: 230 MLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFI--PQNLT 287
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
F + V + G HT+ + + + G EY +L +G G + S+ T +S
Sbjct: 288 ---SFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS 342
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI--RALSGLGVVQ 87
V+ +ACG A+T++G VF+WG G+ QLG +G D + P E+ + L V+
Sbjct: 347 VSSVACGASVGYAVTKDGRVFAWGMGTNYQLG---TGQDEDAWSPVEMMGKQLENRVVLS 403
Query: 88 ISAGGWHSAARTQD 101
+S+GG H+ +D
Sbjct: 404 VSSGGQHTVLLVKD 417
Score = 38.1 bits (87), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 53/129 (41%), Gaps = 16/129 (12%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G H + + EG +S G G+LG G + P I L V ++ G
Sbjct: 302 GQHHTVCMDSEGKAYSLGRAEYGRLGL-GEGAEEKSIPTLISRLPA--VSSVACGASVGY 358
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS--EDFDSQ--NIKVVDVACGSR 152
A T+DG ++AWG Q+G D +WS E Q N V+ V+ G +
Sbjct: 359 AVTKDGRVFAWGMGTNYQLGTGQDED---------AWSPVEMMGKQLENRVVLSVSSGGQ 409
Query: 153 HTLALCDDN 161
HT+ L D
Sbjct: 410 HTVLLVKDK 418
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV 85
L + +ACG+D + LT+ G V S G+ S GQLG P G + P+ I L V
Sbjct: 98 LLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVP-HGPRRCVIPQAIELLR-EKV 155
Query: 86 VQISAGGWHSAARTQDGFLYAWGW---NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
V I+AG H+ A T G ++ WG ++G ++ L L + P + + +N
Sbjct: 156 VSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVT---GLENS 212
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
+ V V GS H+ +L D L+ G N++ QL+
Sbjct: 213 QAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA 245
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 8 GPLKMLSQVFHMPSRMDH--FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
G L + +P R++ F + + + G+ H +A T G VF+WG GQLG
Sbjct: 242 GQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTV 301
Query: 66 SGTDANMEPREIRALSG--------------LGVVQISAGGWHSAARTQDGFLYAWGWNN 111
+ ++ +L G G +IS G H+ A G ++WGWN
Sbjct: 302 ETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAVI-GGVCHSWGWNE 360
Query: 112 GGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
G G + D V P P+ F + V CG+ H+LALC +L
Sbjct: 361 HGMCGDGTEAD--VWAPKPVPGLRFFLG-----LHVGCGAGHSLALCQLPAL 405
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 43 ALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ-ISAGGWHSAARTQD 101
A+ +F+WG S GQLG + + +++ G ++ I+ GG HSA T +
Sbjct: 10 AVPTAAALFAWGANSYGQLGL--GHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDE 67
Query: 102 GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDN 161
G L+ G N GQ+G+ H + ++ + VACG T+ L ++
Sbjct: 68 GSLFVCGLNKDGQLGLG-------HTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENG 120
Query: 162 SLWGCGWNEYNQLSM 176
+ CG N + QL +
Sbjct: 121 QVLSCGSNSFGQLGV 135
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ I G H +T EG +F G GQLG + P ++L G + Q++
Sbjct: 51 IKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVAC 108
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G + T++G + + G N+ GQ+GV H P + + KVV +A G
Sbjct: 109 GWDFTIILTENGQVLSCGSNSFGQLGVP-------HGPRRCVIPQAIELLREKVVSIAAG 161
Query: 151 SRHTLALCDDNSL--WGCG 167
RH LA ++ WG G
Sbjct: 162 LRHALAATASGTVFQWGTG 180
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 15/162 (9%)
Query: 20 PSRMDHFLD----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P + FL+ + + +ACG LT GI+ ++G+GS G LG+ + TD + +P
Sbjct: 384 PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGH-GNLTDIS-QPT 441
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD-PHPMSWS 134
+ AL G +VQ++ G H A + DG L+AWG +GG++G+ + H+ P + +
Sbjct: 442 IVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRES---HNCPQQVPVA 498
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
++Q V CG ++ L + CG N +N+L +
Sbjct: 499 PGQEAQR-----VVCGIDSSMILTSPGRVLACGSNRFNKLGL 535
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 19/153 (12%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP----REIRALSGLG----- 84
+ CG D + LT G V + G+ +LG D P E + + LG
Sbjct: 506 VVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLD 565
Query: 85 ---VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
++ + G HSAA T G Y +G N GQ+G + V P + E
Sbjct: 566 QEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSR--RVSRAPCRVQGLE-----G 618
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
IK+V VACG T+A+ + ++ G +L
Sbjct: 619 IKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRL 651
Score = 38.9 bits (89), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
+V P R+ + + +ACG +A+ EG V+SWG G+RG+LG
Sbjct: 605 RVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLG 652
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 13/151 (8%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSW-----GNGSRGQLGYPSSGTDANMEP 74
P R+ L+ V +A G +T+ G + W G G L
Sbjct: 330 PLRLP-MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVS 388
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R + SG+ + ++ G +A T G + +G + G +G D + P +
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTD--ISQPTIVEAL 446
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
++ +V VACG+ H LAL D L+
Sbjct: 447 LGYE-----MVQVACGASHVLALSTDGELFA 472
>sp|Q54HT1|TIRA_DICDI Protein tirA OS=Dictyostelium discoideum GN=tirA PE=2 SV=1
Length = 1336
Score = 58.2 bits (139), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 13/104 (12%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR------ 78
+FL V+ ++CG D + LT EG VFSWG +GQLG +S + N E + +
Sbjct: 442 NFLKKVLM-VSCGKDFNVLLTNEGQVFSWGKNDQGQLGLGNSDSKENYEIKLVNFDDPYD 500
Query: 79 ALSGLGVVQISAGGWHSAA----RTQDG--FLYAWGWNNGGQVG 116
+ S + IS GG HS A + DG LY WG N+ GQ+G
Sbjct: 501 SNSNKFISFISCGGNHSIAIESNSSTDGNCRLYGWGSNSQGQIG 544
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 20/150 (13%)
Query: 59 GQLGYPSSGTDA---------NMEPREIRALSGLG------VVQISAGGWHSAARTQDGF 103
GQLGY + T+ +E + R++S + V+ +S G + T +G
Sbjct: 406 GQLGYKNGNTNCIGGGGNNKLMIENQIQRSISIINQNFLKKVLMVSCGKDFNVLLTNEGQ 465
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VACGSRHTLALCDDNS 162
+++WG N+ GQ+G+ ++ +++ + +DS + K + ++CG H++A+ ++S
Sbjct: 466 VFSWGKNDQGQLGLGNSDSKENYEIKLVNFDDPYDSNSNKFISFISCGGNHSIAIESNSS 525
Query: 163 LWG-C---GWNEYNQLSMGCGVSQVSVMTR 188
G C GW +Q +G S V ++ +
Sbjct: 526 TDGNCRLYGWGSNSQGQIGEKYSSVPILIK 555
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,867,416
Number of Sequences: 539616
Number of extensions: 4060662
Number of successful extensions: 9286
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 8356
Number of HSP's gapped (non-prelim): 431
length of query: 241
length of database: 191,569,459
effective HSP length: 114
effective length of query: 127
effective length of database: 130,053,235
effective search space: 16516760845
effective search space used: 16516760845
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)