Your job contains 1 sequence.
>psy1607
MCDHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQ
LGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK
LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV
SQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGILVQS
Q
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1607
(241 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E2R5W9 - symbol:RCCD1 "Uncharacterized protein"... 216 1.9e-24 2
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 277 6.3e-24 1
UNIPROTKB|E1B8U7 - symbol:RCCD1 "Uncharacterized protein"... 209 2.9e-23 2
UNIPROTKB|G3V2I3 - symbol:RCCD1 "RCC1 domain-containing p... 213 8.1e-23 2
UNIPROTKB|A6NED2 - symbol:RCCD1 "RCC1 domain-containing p... 213 8.5e-23 2
UNIPROTKB|F1RMH6 - symbol:RCCD1 "Uncharacterized protein"... 212 1.3e-22 2
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 255 1.1e-21 2
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 243 2.6e-20 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 249 6.2e-20 1
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 243 2.7e-19 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 242 3.5e-19 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 240 5.9e-19 1
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 239 7.4e-19 1
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 234 7.5e-19 1
TAIR|locus:2099986 - symbol:AT3G55580 species:3702 "Arabi... 233 7.8e-19 1
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 238 9.5e-19 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 241 2.4e-18 1
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 241 2.9e-18 1
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 241 2.9e-18 1
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 241 2.9e-18 1
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 241 2.9e-18 1
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 233 3.3e-18 1
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 232 3.4e-18 1
RGD|1309901 - symbol:Rccd1 "RCC1 domain containing 1" spe... 223 3.9e-18 1
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 232 4.2e-18 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 227 4.7e-18 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 231 5.5e-18 1
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 238 6.0e-18 1
MGI|MGI:2444156 - symbol:Rccd1 "RCC1 domain containing 1"... 220 8.4e-18 1
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 236 9.8e-18 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 228 1.1e-17 1
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 228 1.1e-17 1
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 228 1.1e-17 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 228 1.1e-17 1
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 228 1.1e-17 1
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 228 1.1e-17 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 228 1.1e-17 1
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 234 1.2e-17 1
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 234 1.2e-17 1
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 235 1.3e-17 1
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 227 1.4e-17 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 227 1.5e-17 1
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 234 1.6e-17 1
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 234 1.6e-17 1
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 222 1.7e-17 1
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 218 1.7e-17 1
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 226 1.7e-17 1
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 233 2.0e-17 1
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 233 2.0e-17 1
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 225 2.4e-17 1
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 232 2.6e-17 1
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 232 2.6e-17 1
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 224 3.1e-17 1
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 231 3.3e-17 1
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 217 3.9e-17 1
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 216 4.3e-17 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 215 8.7e-17 1
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 215 8.7e-17 1
DICTYBASE|DDB_G0284187 - symbol:Dd5P2 "inositol 5-phospha... 221 1.3e-16 1
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 212 1.8e-16 1
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 216 2.0e-16 1
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 212 5.3e-16 1
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 208 5.6e-16 1
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 219 6.3e-16 1
UNIPROTKB|F1NDJ4 - symbol:RCCD1 "Uncharacterized protein"... 152 8.0e-16 2
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 206 8.2e-16 1
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 206 8.2e-16 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 205 1.1e-15 1
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 203 1.1e-15 1
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 209 1.1e-15 1
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 209 1.2e-15 1
UNIPROTKB|E1BX75 - symbol:ALS2 "Uncharacterized protein" ... 192 1.2e-15 2
ZFIN|ZDB-GENE-070402-2 - symbol:als2a "amyotrophic latera... 192 1.4e-15 2
UNIPROTKB|Q74DR4 - symbol:GSU1251 "ATS1 domain repeat pro... 202 2.1e-15 2
TIGR_CMR|GSU_1251 - symbol:GSU_1251 "BNR repeat domain pr... 202 2.1e-15 2
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 204 4.0e-15 1
UNIPROTKB|F1SI31 - symbol:ALS2 "Uncharacterized protein" ... 192 4.0e-15 2
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 204 4.3e-15 1
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 195 5.8e-15 1
DICTYBASE|DDB_G0276527 - symbol:DDB_G0276527 "putative bi... 205 6.7e-15 1
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 202 8.1e-15 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 198 1.6e-14 1
RGD|1310372 - symbol:Als2 "amyotrophic lateral sclerosis ... 188 1.7e-14 2
MGI|MGI:1921268 - symbol:Als2 "amyotrophic lateral sclero... 187 1.7e-14 2
UNIPROTKB|E2RSG1 - symbol:ALS2 "Uncharacterized protein" ... 183 4.5e-14 2
UNIPROTKB|Q5BIW4 - symbol:ALS2 "Alsin" species:9598 "Pan ... 182 5.8e-14 2
RGD|1306897 - symbol:Nek8 "NIMA-related kinase 8" species... 190 7.2e-14 1
UNIPROTKB|Q96Q42 - symbol:ALS2 "Alsin" species:9606 "Homo... 181 7.4e-14 2
WB|WBGene00021685 - symbol:herc-1 species:6239 "Caenorhab... 192 7.6e-14 1
UNIPROTKB|Q9BL11 - symbol:herc-1 "Protein HERC-1" species... 192 7.6e-14 1
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 193 9.0e-14 1
UNIPROTKB|Q74AS9 - symbol:GSU2272 "ATS1 domain repeat lip... 182 1.8e-13 1
TIGR_CMR|GSU_2272 - symbol:GSU_2272 "lipoprotein, putativ... 182 1.8e-13 1
WB|WBGene00017195 - symbol:glo-4 species:6239 "Caenorhabd... 190 1.8e-13 1
ASPGD|ASPL0000064315 - symbol:rcc1 species:162425 "Emeric... 184 2.0e-13 1
SGD|S000003065 - symbol:SRM1 "Nucleotide exchange factor ... 182 2.7e-13 1
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 190 2.9e-13 1
ZFIN|ZDB-GENE-061220-11 - symbol:sergef "secretion regula... 180 3.3e-13 1
FB|FBgn0000247 - symbol:ca "claret" species:7227 "Drosoph... 189 3.5e-13 1
MGI|MGI:1890646 - symbol:Nek8 "NIMA (never in mitosis gen... 182 5.2e-13 1
WARNING: Descriptions of 120 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 216 (81.1 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 39/84 (46%), Positives = 53/84 (63%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G +H L L + G VFSWG G GQLG+ S +A EPR + AL GL V +++AGGWHS
Sbjct: 103 GAEHALLLDEAGQVFSWGQGRHGQLGHGS--LEAEPEPRLLEALQGLPVAEVAAGGWHSV 160
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGK 120
++ G +Y WGWN GQ+ + +
Sbjct: 161 CVSETGDIYIWGWNESGQLALPSR 184
Score = 82 (33.9 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT--DANMEPREI 77
P ++ L V ++A G H + +++ G ++ WG GQL PS D PRE
Sbjct: 138 PRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREA 197
Query: 78 RALSGLGV-VQISAGG 92
L+ G V+ +A G
Sbjct: 198 SGLNEDGFEVRRTAKG 213
Score = 78 (32.5 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
VV +CGSRHT + L+ GW +Y QL
Sbjct: 239 VVKASCGSRHTAVVTGTGELYTWGWGKYGQL 269
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 277 (102.6 bits), Expect = 6.3e-24, P = 6.3e-24
Identities = 57/147 (38%), Positives = 85/147 (57%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IACG HCLA+T EG V SWG GQLG T+ ++ P++I+A G+ + ++A
Sbjct: 122 IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL--GDTEDSLVPQKIQAFEGIRIKMVAA 179
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+AA T+DG LY WGW G +G+ + D +V + + E K+ VACG
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE-------KMSMVACG 232
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
RHT+++ +L+ GW++Y QL G
Sbjct: 233 WRHTISVSYSGALYTYGWSKYGQLGHG 259
Score = 255 (94.8 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 68/186 (36%), Positives = 103/186 (55%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG+ H ++++ G ++++G GQLG+ + ++ P ++ ALS + QIS GGW
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGH--GDLEDHLIPHKLEALSNSFISQIS-GGW 285
Query: 94 -HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A T DG LY WGWN GQVGV LD P + + +D Q KVV V+CG R
Sbjct: 286 RHTMALTSDGKLYGWGWNKFGQVGVGNNLDQC--SPVQVRFPDD---Q--KVVQVSCGWR 338
Query: 153 HTLALCDDNSL--WGCGWNEYNQLSMGCGVSQ--VSVMTRLSVP----EHVKNCPIVKLF 204
HTLA+ + N++ WG G N QL +G V + ++ LSV +H+++ I
Sbjct: 339 HTLAVTERNNVFAWGRGTN--GQLGIGESVDRNFPKIIEALSVDGASGQHIESSNIDPSS 396
Query: 205 AEHWNS 210
+ W S
Sbjct: 397 GKSWVS 402
Score = 243 (90.6 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 55/148 (37%), Positives = 84/148 (56%)
Query: 31 VTDIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+ + CG DH +A +Q G+ V+SWG G G+LG+ +S +D P I+AL G+ + QI+
Sbjct: 69 IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS-SDL-FTPLPIKALHGIRIKQIA 126
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G H A T +G + +WG N GQ+G+ D +V P + + F+ IK+V A
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKI---QAFEGIRIKMV--AA 179
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ HT A+ +D L+G GW Y L +G
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLG 207
Score = 225 (84.3 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 55/180 (30%), Positives = 96/180 (53%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ F + + +A G +H A+T++G ++ WG G G LG TD + P +
Sbjct: 162 VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL-GDRTD-RLVPERVT 219
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-DLVVHDPHPM-SWSED 136
+ G + ++ G H+ + + G LY +GW+ GQ+G G L D ++ PH + + S
Sbjct: 220 STGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLG-HGDLEDHLI--PHKLEALSNS 276
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
F SQ ++ G RHT+AL D L+G GWN++ Q+ +G + Q S + ++ P+ K
Sbjct: 277 FISQ------ISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQK 329
Score = 203 (76.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 53/175 (30%), Positives = 84/175 (48%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+ G H +AL IV SWG G GQLG+ + + P ++ AL G +V ++ G
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDA--EDRPSPTQLSALDGHQIVSVTCGAD 77
Query: 94 HSAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ A +Q G +Y+WGW + G++G DL P P+ I++ +ACG
Sbjct: 78 HTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFT--PLPIK-----ALHGIRIKQIACGDS 130
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
H LA+ + + G N+ QL +G V ++ E ++ +V AEH
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIR-IKMVAAGAEH 183
Score = 116 (45.9 bits), Expect = 0.00026, P = 0.00026
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS 81
D V ++CG+ H LA+T+ VF+WG G+ GQLG S D N P+ I ALS
Sbjct: 327 DQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGES-VDRNF-PKIIEALS 378
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 209 (78.6 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 40/85 (47%), Positives = 53/85 (62%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVVQISAGGWHS 95
G +H L L G VFSWG G GQLG+ GT +A EPR + AL GL + +++AGGWHS
Sbjct: 167 GAEHALLLDAAGQVFSWGAGRHGQLGH---GTLEAEPEPRLLEALQGLRMAEVAAGGWHS 223
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGK 120
++ G +Y WGWN GQ+ + K
Sbjct: 224 VCLSETGDIYIWGWNESGQLALPTK 248
Score = 111 (44.1 bits), Expect = 0.00078, P = 0.00078
Identities = 32/99 (32%), Positives = 46/99 (46%)
Query: 56 GSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
GS G+ G P+ P + G V++S G H+A T+ G LY WGW GQ+
Sbjct: 274 GSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQL 333
Query: 116 GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
G + D D P E F + ++V V+CG +T
Sbjct: 334 GHK---DTTTLD-RPCR-VEYFVDKQLQVRTVSCGPWNT 367
Score = 82 (33.9 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
S + V V+CGSRHT L L+ GW +Y QL
Sbjct: 298 SPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQL 333
Score = 69 (29.3 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 22/76 (28%), Positives = 33/76 (43%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP--SSGTDANMEPREI 77
P ++ L + ++A G H + L++ G ++ WG GQL P S D E
Sbjct: 202 PRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAGEA 261
Query: 78 RALS--GLGVVQISAG 91
L G V + SAG
Sbjct: 262 SGLEEDGSEVKRGSAG 277
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 213 (80.0 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 40/91 (43%), Positives = 56/91 (61%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLVMA 213
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
+++AGGWHS ++ G +Y WGWN GQ+ +
Sbjct: 214 EVAAGGWHSVCVSETGDIYIWGWNESGQLAL 244
Score = 98 (39.6 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 25/73 (34%), Positives = 35/73 (47%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G V+ S G H+A T+ G LY WGW GQ+G E L P + + F +
Sbjct: 297 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSL--DRPRRVEY---FVDKQ 351
Query: 142 IKVVDVACGSRHT 154
++V V CG +T
Sbjct: 352 LQVKAVTCGPWNT 364
Score = 73 (30.8 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V +CGSRHT + L+ GW +Y QL
Sbjct: 301 VKASCGSRHTAVVTRTGELYTWGWGKYGQL 330
Score = 72 (30.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
P ++ LV+ ++A G H + +++ G ++ WG GQL P+
Sbjct: 201 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPT 246
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 213 (80.0 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 40/91 (43%), Positives = 56/91 (61%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPRLLEALQGLVMA 213
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
+++AGGWHS ++ G +Y WGWN GQ+ +
Sbjct: 214 EVAAGGWHSVCVSETGDIYIWGWNESGQLAL 244
Score = 73 (30.8 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V +CGSRHT + L+ GW +Y QL
Sbjct: 303 VKASCGSRHTAVVTRTGELYTWGWGKYGQL 332
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 212 (79.7 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 47/125 (37%), Positives = 68/125 (54%)
Query: 3 DHLASGPLKML--SQVFHMPSRMDHFLDLVVT----DIACGFDHCLALTQEGIVFSWGNG 56
D +GPL +L + + P + + L T + G +H L L G VFSWG G
Sbjct: 133 DETQAGPLPLLPCASAYVSP-QPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGGG 191
Query: 57 SRGQLGYPSSGT-DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
GQLG+ GT +A EPR + AL GL + +++AGGWHS ++ G +Y WGWN GQ+
Sbjct: 192 RHGQLGH---GTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWNESGQL 248
Query: 116 GVEGK 120
+ +
Sbjct: 249 ALPAR 253
Score = 73 (30.8 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V +CGSRHT + L+ GW +Y QL
Sbjct: 309 VKASCGSRHTAVVTRTGELYTWGWGKYGQL 338
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 255 (94.8 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 50/161 (31%), Positives = 90/161 (55%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ MP+++ + + ++CG H LAL+++G VFSWG S GQLG + + P
Sbjct: 113 EISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAI-P 171
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLVVHDPHPMSW 133
+++++L G+ + Q++AGG HS A + G + WG N GQ+ + G K+ ++ PH +
Sbjct: 172 QKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIG- 230
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT L ++ ++ G N QL
Sbjct: 231 ----ALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 267
Score = 237 (88.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 59/195 (30%), Positives = 103/195 (52%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + DL V ++CG +H +A+ +G VF+WG GS GQLG + + P +I+A
Sbjct: 65 PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKA 123
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G+ ++Q+S G +HS A ++DG +++WG N+ GQ+G+ GK P + E
Sbjct: 124 LAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSLE---- 178
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
I + VA G H+ AL + +G G N QL++ + + S+ +KN
Sbjct: 179 -GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGA-LKNLS 236
Query: 200 IVKLFAEHWNSARLS 214
++ + + ++A L+
Sbjct: 237 VIYISCGYEHTAVLT 251
Score = 179 (68.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 55/181 (30%), Positives = 87/181 (48%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V+S G+ S GQLG + EP I+AL+ L V +S G H
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVSCGKEH 85
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + IK++ V+CG H+
Sbjct: 86 SVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIK-----ALAGIKIIQVSCGHYHS 139
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
LAL +D ++ G N QL +G ++ ++ E + P+ ++ A +S LS
Sbjct: 140 LALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI---PLAQVAAGGTHSFALS 196
Query: 215 V 215
+
Sbjct: 197 L 197
Score = 145 (56.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 51/191 (26%), Positives = 80/191 (41%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
+P ++ + + +A G H AL+ G F WG+ GQL + + +P I
Sbjct: 170 IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI 229
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED- 136
AL L V+ IS G H+A T++G ++ +G N+ GQ+ P P S
Sbjct: 230 GALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL-----------QPSPRSGQRGP 278
Query: 137 --FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
+ +V + C S HT+A ++ G +S+G G S S T P
Sbjct: 279 QLIEGIGGRVSQIECASYHTIAY-----VYTTG----QVVSLGRGPSHTSNPTHQEAP-- 327
Query: 195 VKNCPIVKLFA 205
+N I L A
Sbjct: 328 AENSDITCLLA 338
Score = 127 (49.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 41/149 (27%), Positives = 73/149 (48%)
Query: 73 EPREIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
+PR ++A SG+ ++Q ++G HS + +Y+ G N+ GQ+G + D P P+
Sbjct: 11 KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQ--RRDQSTERPEPI 68
Query: 132 SWSEDFDSQNIKVVD-VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM-TRL 189
D VD V+CG H++A+C ++ G QL +G ++S M T++
Sbjct: 69 QALNDLH------VDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIG-EFKEISFMPTKI 121
Query: 190 SVPEHVKNCPIVKLFAEHWNSARLSVPEH 218
+K I+++ H++S LS H
Sbjct: 122 KALAGIK---IIQVSCGHYHSLALSEDGH 147
Score = 37 (18.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 192 PEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAG-HWN 233
P H N + AE+ + L E D + +FAG H N
Sbjct: 315 PSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAGAHAN 357
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 243 (90.6 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 52/141 (36%), Positives = 81/141 (57%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
DL + DIA G H ALT EG V+ WG G G+LG+ + + M P+++ L+G ++Q
Sbjct: 247 DLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQ 306
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHDPHP---MSWSEDFD 138
+S GG HS A T+DG ++++G + G++G K L+L +H P P + +++ D
Sbjct: 307 VSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEED 366
Query: 139 SQNIKVVDVACGSRHTLALCD 159
VACG RHTLA+ +
Sbjct: 367 DGKWIAKHVACGGRHTLAIVE 387
Score = 213 (80.0 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 52/164 (31%), Positives = 83/164 (50%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G H LAL ++G +++WGN GQLG + T P ++ L L +V I+AGGW
Sbjct: 201 IAVGAFHNLALKEDGTLWAWGNNEYGQLG--TGDTQPRSYPIPVQGLDDLTLVDIAAGGW 258
Query: 94 HSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
HS A T +G +Y WG G++G K ++ + ED ++ V+CG
Sbjct: 259 HSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGED-------IIQVSCGG 311
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
H++AL D ++ G ++ +L G +V+ L +P H+
Sbjct: 312 THSVALTRDGRIFSFGRGDHGRLGYG---RKVTTGQPLELPIHI 352
Score = 191 (72.3 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 62/201 (30%), Positives = 94/201 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPREI- 77
PS + ++ + A G HCLA+ +G ++WG GQ G PS R+I
Sbjct: 82 PSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIV 141
Query: 78 ---RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R L V Q++AGG HS T++G Y W W GQ G + + P +
Sbjct: 142 IPKRCAQQLTVRQVAAGGTHSVVLTREG--YVWTW---GQPWPPGDIKQI-SVPVRVQGL 195
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP-E 193
E N++++ A G+ H LAL +D +LW G NEY QL G G +Q +P +
Sbjct: 196 E-----NVRLI--AVGAFHNLALKEDGTLWAWGNNEYGQL--GTGDTQPR---SYPIPVQ 243
Query: 194 HVKNCPIVKLFAEHWNSARLS 214
+ + +V + A W+S L+
Sbjct: 244 GLDDLTLVDIAAGGWHSTALT 264
Score = 189 (71.6 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 50/166 (30%), Positives = 76/166 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V + G + LA+ +G +F+WG RG LG+P T P +++L+ + +VQ +
Sbjct: 40 VRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPE-TKTESTPSLVKSLANVKIVQAAI 98
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GGWH A G YAWG N GQ G E D +Q + V VA G
Sbjct: 99 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAG 158
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
H++ L + +W W + G + Q+SV R+ E+V+
Sbjct: 159 GTHSVVLTREGYVWT--WGQ--PWPPG-DIKQISVPVRVQGLENVR 199
Score = 157 (60.3 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 44/128 (34%), Positives = 56/128 (43%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREI-RALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
V +WG+G GQLG GTD E + AL V + G +S A DG L+ WG
Sbjct: 7 VIAWGSGEDGQLGL---GTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG 63
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDF---DSQNIKVVDVACGSRHTLALCDDNSLWG 165
WN G +G H P + S N+K+V A G H LA+ D +
Sbjct: 64 WNQRGTLG---------HPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYA 114
Query: 166 CGWNEYNQ 173
G NEY Q
Sbjct: 115 WGGNEYGQ 122
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 249 (92.7 bits), Expect = 6.2e-20, P = 6.2e-20
Identities = 52/156 (33%), Positives = 84/156 (53%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + + +ACG H +AL+++G VFSWG S GQLG + P+ +R
Sbjct: 118 IPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKE-FPSQASPQRVR 176
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G + V P+S
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGN-NAPVQRYKPVSIGA--- 232
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + VV ++CG +HT L D ++ G N Y QL
Sbjct: 233 LKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQL 268
Score = 233 (87.1 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 58/195 (29%), Positives = 101/195 (51%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L V ++CG +H LA+ +G VF+WG S GQLG + P++I+
Sbjct: 66 PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIKT 124
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+G+ ++Q++ G +HS A ++DG +++WG N+ GQ+G+ GK P S
Sbjct: 125 LAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGL-GK-----EFPSQASPQRVRSL 178
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
+ I + VA G H+ AL + +G G N QL++ + V +S+ +K
Sbjct: 179 EGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGA-LKTLG 237
Query: 200 IVKLFAEHWNSARLS 214
+V + + ++A L+
Sbjct: 238 VVSISCGYKHTAVLT 252
Score = 208 (78.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 52/143 (36%), Positives = 72/143 (50%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L +G V S G+ SRGQLG GT +P I AL L V +S G H
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ P + IK++ VACG H+
Sbjct: 87 SLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIK-----TLAGIKIIQVACGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
+AL +D ++ G N + QL +G
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLG 163
Score = 177 (67.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 52/140 (37%), Positives = 71/140 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME---PRE 76
P R+ + + +A G H AL+ G F WG+ S GQL SG +A ++ P
Sbjct: 172 PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL--SGNNAPVQRYKPVS 229
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I AL LGVV IS G H+A TQDG ++ +G N+ GQ+G + + P + E
Sbjct: 230 IGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEK--RGPQLVERIEG 287
Query: 137 FDSQNIKVVDVACGSRHTLA 156
SQ +D CGS HTLA
Sbjct: 288 LVSQ----ID--CGSDHTLA 301
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 243 (90.6 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 53/156 (33%), Positives = 86/156 (55%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ D+ + ++CG H LAL++ G VFSWG+ S GQLG + P+ +R
Sbjct: 119 IPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKK-FPSQASPQRVR 177
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+L G+ + Q++AGG HS A + G + WG NN GQ+ + K ++ P S S
Sbjct: 178 SLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALH-KNNVSGQSYKPYSISA--- 233
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ V+ ++CG HT+ L + ++ G N Y QL
Sbjct: 234 LKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQL 269
Score = 215 (80.7 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 48/143 (33%), Positives = 77/143 (53%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++CG +H LA+ +G VF+WG GS GQLG + N+ P +I+ L+ + + Q+S G +
Sbjct: 81 VSCGKEHSLAVCHKGRVFAWGAGSEGQLG-TGEFKETNLIPMKIKTLNDIKIKQVSCGHY 139
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A ++ G +++WG N+ GQ+G+ K P S I + VA G H
Sbjct: 140 HSLALSEGGQVFSWGSNSDGQLGLGKKF------PSQASPQRVRSLDGIPLAQVAAGGAH 193
Query: 154 TLALCDDNSLWGCGWNEYNQLSM 176
+ AL + +G G N QL++
Sbjct: 194 SFALSLSGTSFGWGRNNAGQLAL 216
Score = 177 (67.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 51/143 (35%), Positives = 69/143 (48%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L G V S G+ RGQLG + A ++ R IRAL L V +S G H
Sbjct: 29 ASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKER-IRALETLHVDLVSCGKEH 87
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G G+ P + D IK+ V+CG H+
Sbjct: 88 SLAVCHKGRVFAWGAGSEGQLGT-GEFKETNLIPMKIKTLND-----IKIKQVSCGHYHS 141
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL + ++ G N QL +G
Sbjct: 142 LALSEGGQVFSWGSNSDGQLGLG 164
Score = 159 (61.0 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 44/139 (31%), Positives = 67/139 (48%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-YPSSGTDANMEPREIR 78
P R+ + + +A G H AL+ G F WG + GQL + ++ + + +P I
Sbjct: 173 PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSIS 232
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP-MSWSEDF 137
AL LGV+ IS G H+ TQ+G ++ +G N GQ+G H P S +
Sbjct: 233 ALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLG---------HSPTAEKSGPQLV 283
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + V + CGS HTLA
Sbjct: 284 EGIDGLVSQIDCGSYHTLA 302
Score = 127 (49.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P + +L V I+CG++H + LTQ G VF++G+ + GQLG+ S T P+ +
Sbjct: 226 YKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGH--SPTAEKSGPQLV 283
Query: 78 RALSGLGVVQISAGGWHSAA 97
+ GL V QI G +H+ A
Sbjct: 284 EGIDGL-VSQIDCGSYHTLA 302
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 242 (90.2 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 52/160 (32%), Positives = 86/160 (53%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ P ++ D+ + ++CG H LAL+++ VFSWG S GQLG + P
Sbjct: 114 EISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKE-FPSQASP 172
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ +R+L G+ + Q++AGG HS A + G + WG N+ GQ+ + G+ ++ V P+S
Sbjct: 173 QRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR-NVPVQSNKPLSVG 231
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+N+ VV ++CG HT L D ++ G N QL
Sbjct: 232 A---LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Score = 223 (83.6 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 62/201 (30%), Positives = 101/201 (50%)
Query: 2 CDHLASGPL-KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQ 60
C + G L + +Q +P + L+V ++CG +H LA+ +G VF+WG GS GQ
Sbjct: 47 CGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQ 106
Query: 61 LGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
LG + + P++I L+ + ++Q+S G +HS A ++D +++WG N+ GQ+G+ GK
Sbjct: 107 LGI-GEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL-GK 164
Query: 121 LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
P S + I + VA G H+ AL + +G G N QL++
Sbjct: 165 -----EFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN 219
Query: 181 SQVSVMTRLSVPEHVKNCPIV 201
V LSV +KN +V
Sbjct: 220 VPVQSNKPLSVGA-LKNLGVV 239
Score = 189 (71.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 51/143 (35%), Positives = 71/143 (49%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
A G H L L V S G+ SRGQLG G P I+AL L V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
S A G ++AWG + GQ+G+ G+ + P + D IK++ V+CG H+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLND-----IKIIQVSCGHYHS 140
Query: 155 LALCDDNSLWGCGWNEYNQLSMG 177
LAL D+ ++ G N + QL +G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLG 163
Score = 168 (64.2 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 47/138 (34%), Positives = 64/138 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P R+ + + +A G H AL+ G F WG+ S GQL +P +
Sbjct: 172 PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG 231
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL LGVV IS G H+A TQDG ++ +G N GQ+G + P + +
Sbjct: 232 ALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGLV 289
Query: 139 SQNIKVVDVACGSRHTLA 156
SQ +D CGS HTLA
Sbjct: 290 SQ----ID--CGSYHTLA 301
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 240 (89.5 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 53/144 (36%), Positives = 82/144 (56%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
++ + CG HC+AL+++G +F WG S GQLG G + + P+ +++L G+ + QISA
Sbjct: 139 ISQVMCGNHHCIALSKDGQLFVWGENSSGQLGL-GKGEPSTLSPQPLKSLCGIPLTQISA 197
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG HS A + G ++ WG N+ GQ+G+ + D V P + + SQ KVV ++CG
Sbjct: 198 GGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAV--PCHIKFLR---SQ--KVVYISCG 250
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
HT AL + L+ G QL
Sbjct: 251 EEHTAALTKEGGLFTFGNGSKGQL 274
Score = 205 (77.2 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 47/146 (32%), Positives = 76/146 (52%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
++ ++CG H LA+ ++G VF+WG G GQLG + +A PR I+ L + Q+
Sbjct: 86 ISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGL-GTAEEAVRVPRLIKKLCEHRISQVMC 144
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H A ++DG L+ WG N+ GQ+G+ GK + P P+ I + ++ G
Sbjct: 145 GNHHCIALSKDGQLFVWGENSSGQLGL-GKGEPSTLSPQPLK-----SLCGIPLTQISAG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ AL +++G G N QL +
Sbjct: 199 GDHSFALSFSGAVFGWGKNSAGQLGL 224
Score = 193 (73.0 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 48/147 (32%), Positives = 74/147 (50%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGG 92
++ACG H L L +G V++ G+ S GQLG+ G+ P + AL + +S G
Sbjct: 38 EVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGS----RPELVGALDAQKISGVSCGQ 93
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
HS A + G ++AWG +GGQ+G+ G + V P + + ++ V CG+
Sbjct: 94 AHSLAVNEQGQVFAWGAGDGGQLGL-GTAEEAVRVPRLIKKLCEH-----RISQVMCGNH 147
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCG 179
H +AL D L+ G N QL +G G
Sbjct: 148 HCIALSKDGQLFVWGENSSGQLGLGKG 174
Score = 191 (72.3 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 55/159 (34%), Positives = 74/159 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +T I+ G DH AL+ G VF WG S GQLG A P I+
Sbjct: 181 PQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRA--VPCHIKF 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+AA T++G L+ +G + GQ+G D ++P P E +
Sbjct: 239 LRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGH----DSTRNEPLPRRVMELMGT 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMG 177
+ V +ACG HTLA L + G N QL G
Sbjct: 295 E---VSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG 330
Score = 172 (65.6 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 45/133 (33%), Positives = 71/133 (53%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H ALT+EG +F++GNGS+GQLG+ S+ + PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPL--PRRVMELMGTEVSQIAC 301
Query: 91 GGWHSAARTQD-GFLYAWGWNNGGQVG--VEG--KLDLVVHDPHPMSWSEDFD-SQNIKV 144
G H+ A G +YA+G N GQ+G + G K + V + P+ + +++ +
Sbjct: 302 GRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPLCIGNAYTRTEHCTI 361
Query: 145 VDVACGSRHTLAL 157
+ G H L
Sbjct: 362 AKIHSGGDHNFLL 374
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/137 (29%), Positives = 62/137 (45%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
++ WG+ GQLG +S EPR G G+ +++ G HS DG +Y G
Sbjct: 1 MMLCWGSSGAGQLGIGASEASV-FEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCG 59
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N+ GQ+G D P + D+Q K+ V+CG H+LA+ + ++ G
Sbjct: 60 SNSCGQLGH----DKGGSRPELVG---ALDAQ--KISGVSCGQAHSLAVNEQGQVFAWGA 110
Query: 169 NEYNQLSMGCGVSQVSV 185
+ QL +G V V
Sbjct: 111 GDGGQLGLGTAEEAVRV 127
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 239 (89.2 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 48/161 (29%), Positives = 89/161 (55%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ MP++++ + + ++CG H LAL+++G VFSWG+ +GQLG + + P
Sbjct: 119 EISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGL-GNNLCSQASP 177
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK-LDLVVHDPHPMSW 133
+++++L G+ + Q++AGG HS A + G + WG N GQ+ + G ++ PH +
Sbjct: 178 QKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIG- 236
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + VV ++CG HT L +D ++ G + QL
Sbjct: 237 ----ALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL 273
Score = 221 (82.9 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 49/143 (34%), Positives = 80/143 (55%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++CG +H +A+ +G VF+WG GS GQLG S + + P +I +L+G+ ++Q+S G +
Sbjct: 85 VSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGES-KEISFMPTKINSLAGIKIIQVSCGHY 143
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HS A ++DG +++WG N GQ+G+ L P + E I + VA G H
Sbjct: 144 HSLALSEDGQVFSWGSNRQGQLGLGNNLCSQA-SPQKVKSLE-----GIPLAQVAAGGTH 197
Query: 154 TLALCDDNSLWGCGWNEYNQLSM 176
+ AL + +G G N QL++
Sbjct: 198 SFALSLMGTSFGWGNNRSGQLAL 220
Score = 198 (74.8 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 63/200 (31%), Positives = 98/200 (49%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R++ L + A G H L L V+S G+ SRGQLG S + EP I+A
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEP--IQA 76
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LS + + +S G HS A G ++ WG + GQ+G+ G+ + P ++
Sbjct: 77 LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEISFMPTKIN-----SL 130
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV-SQVSVMTRLSVPEHVKNC 198
IK++ V+CG H+LAL +D ++ G N QL +G + SQ S P+ VK+
Sbjct: 131 AGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQAS-------PQKVKSL 183
Query: 199 ---PIVKLFAEHWNSARLSV 215
P+ ++ A +S LS+
Sbjct: 184 EGIPLAQVAAGGTHSFALSL 203
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 40/139 (28%), Positives = 62/139 (44%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPREIR 78
P ++ + + +A G H AL+ G F WGN GQL +S + +P I
Sbjct: 177 PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIG 236
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP-MSWSEDF 137
AL L VV IS G H++ T+DG ++ +G ++ Q+ H P +
Sbjct: 237 ALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQ---------HSPRSGRGGPQLI 287
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ V + CGS HT+A
Sbjct: 288 EGIGGHVSQIECGSYHTIA 306
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 234 (87.4 bits), Expect = 7.5e-19, P = 7.5e-19
Identities = 62/184 (33%), Positives = 98/184 (53%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI-RALSGLGVVQI 88
VT+++CG H LALT EG VF+WG + GQ+G SG+ AN PR++ L +V I
Sbjct: 130 VTEVSCGSHHSLALTHEGEVFAWGYNNCGQVG---SGSTANQPTPRKVSNCLQNKVIVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A T +G +Y WG+N GQ+G+ G ++ + ++ Q V+ +A
Sbjct: 187 ACGQTSSMAVTDNGEVYGWGYNGNGQLGL-G------NNGNQLTPCRLIALQGFCVLQIA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
G H+LAL D+ L+ G N Y QL G +Q+S + ++ E + I + H
Sbjct: 240 SGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQVMTEKERIVE--IAACHSTHT 297
Query: 209 NSAR 212
++A+
Sbjct: 298 SAAK 301
Score = 220 (82.5 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 54/173 (31%), Positives = 91/173 (52%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
SQ P ++D + ++ G H L +T++G +++WG+ QLG + T+ +
Sbjct: 59 SQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLG--NGTTNQGV 116
Query: 73 EPREIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P + L G V ++S G HS A T +G ++AWG+NN GQVG G + P P
Sbjct: 117 SPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVG-SGS---TANQPTPR 172
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S QN +V++ACG ++A+ D+ ++G G+N QL +G +Q++
Sbjct: 173 KVSNCL--QNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 197 (74.4 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 51/151 (33%), Positives = 80/151 (52%)
Query: 20 PSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P ++ + L + V+ +IACG +A+T G V+ WG GQLG ++G + P +
Sbjct: 171 PRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQ--LTPCRLI 228
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G V+QI++G HS A T +G LYAWG N GQ+G K + + P + ++
Sbjct: 229 ALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQL--SPVQVMTEKE-- 284
Query: 139 SQNIKVVDVA-CGSRHTLALCDDNS---LWG 165
++V++A C S HT A + +WG
Sbjct: 285 ----RIVEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 139 (54.0 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 36/96 (37%), Positives = 53/96 (55%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ V IA G+ H LALT EG++++WG + GQLG +G +N + P ++
Sbjct: 224 PCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPVQVM 280
Query: 79 ALSGLGVVQISA-GGWH-SAARTQDGFLYAWGWNNG 112
+V+I+A H SAA+TQ G +Y WG G
Sbjct: 281 TEKER-IVEIAACHSTHTSAAKTQSGQVYMWGQCRG 315
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 233 (87.1 bits), Expect = 7.8e-19, P = 7.8e-19
Identities = 59/187 (31%), Positives = 96/187 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG H +T G + ++G G GQ G S TD + P + +L G+ + +++A
Sbjct: 313 VKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGS--TDDELSPTCVSSLLGIRIEEVAA 370
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G WH+ + DG +YA+G N GQ+G G D P + E + +N+ V ++CG
Sbjct: 371 GLWHTTCASSDGDVYAFGGNQFGQLGT-G-CDQAETLPKLL---EAPNLENVNVKTISCG 425
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE-HVKNCPIVKLFAEHWN 209
+RHT + D+ ++ GWN+Y QL +G V+ R + E +K+C + W+
Sbjct: 426 ARHTAVITDEGRVFCWGWNKYGQLGIG------DVIDRNAPAEVRIKDCFPKNIACGWWH 479
Query: 210 SARLSVP 216
+ L P
Sbjct: 480 TLLLGQP 486
Score = 160 (61.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 43/141 (30%), Positives = 70/141 (49%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIR 78
P+ + L + + ++A G H + +G V+++G GQLG +G D A P+ +
Sbjct: 354 PTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLG---TGCDQAETLPKLLE 410
Query: 79 A--LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
A L + V IS G H+A T +G ++ WGWN GQ+G+ +D + P + +
Sbjct: 411 APNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDR--NAPAEVRIKDC 468
Query: 137 FDSQNIKVVDVACGSRHTLAL 157
F ++ACG HTL L
Sbjct: 469 FPK------NIACGWWHTLLL 483
Score = 115 (45.5 bits), Expect = 0.00041, P = 0.00041
Identities = 41/167 (24%), Positives = 67/167 (40%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
++ V G+ HC+A+T+ V++WG G D + R I Q
Sbjct: 116 EVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPTGRVFGQVDGDSCERNI----SFSTEQ 171
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD--------- 138
+S+ ++ G GG+ + ++ S S++ D
Sbjct: 172 VSSSS--QGKKSSGGTSSQVEGRGGGEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVS 229
Query: 139 -SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ +++V VA G RHTLAL D +WG G+ QL +G V VS
Sbjct: 230 LAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVS 276
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 238 (88.8 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 48/162 (29%), Positives = 89/162 (54%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
++ MP++++ + + ++CG H LAL+++G VFSWG+ +GQLG + + P
Sbjct: 120 EISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGL-GNNLCSQASP 178
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV--VHDPHPMS 132
+++++L G+ + Q++AGG HS A + G + WG N GQ+ + G ++ PH +
Sbjct: 179 QKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIG 238
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ + VV ++CG HT L +D ++ G + QL
Sbjct: 239 -----ALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL 275
Score = 224 (83.9 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 58/177 (32%), Positives = 90/177 (50%)
Query: 2 CDHLASGPLKMLS-QVFHMPSRMDHFLDLVVTD-IACGFDHCLALTQEGIVFSWGNGSRG 59
C + G L S Q P L V D ++CG +H +A+ +G VF+WG GS G
Sbjct: 52 CGDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEG 111
Query: 60 QLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG 119
QLG S + + P +I +L+G+ ++Q+S G +HS A ++DG +++WG N GQ+G+
Sbjct: 112 QLGIGES-KEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGN 170
Query: 120 KLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
L P + E I + VA G H+ AL + +G G N QL++
Sbjct: 171 NLCSQA-SPQKVKSLE-----GIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLAL 221
Score = 194 (73.4 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 63/201 (31%), Positives = 98/201 (48%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE-IR 78
P R++ L + A G H L L V+S G+ SRGQLG S + P E I+
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSP--QSTKRPEEPIQ 76
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
ALS + + +S G HS A G ++ WG + GQ+G+ G+ + P ++
Sbjct: 77 ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEISFMPTKIN-----S 130
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV-SQVSVMTRLSVPEHVKN 197
IK++ V+CG H+LAL +D ++ G N QL +G + SQ S P+ VK+
Sbjct: 131 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQAS-------PQKVKS 183
Query: 198 C---PIVKLFAEHWNSARLSV 215
P+ ++ A +S LS+
Sbjct: 184 LEGIPLAQVAAGGTHSFALSL 204
Score = 142 (55.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 40/140 (28%), Positives = 61/140 (43%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM--EPREI 77
P ++ + + +A G H AL+ G F WGN GQL + A +P I
Sbjct: 178 PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSI 237
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP-MSWSED 136
AL L VV IS G H++ T+DG ++ +G ++ Q+ H P +
Sbjct: 238 GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQ---------HSPRSGRGGPQL 288
Query: 137 FDSQNIKVVDVACGSRHTLA 156
+ V + CGS HT+A
Sbjct: 289 IEGIGGHVSQIECGSYHTIA 308
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 241 (89.9 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 63/175 (36%), Positives = 96/175 (54%)
Query: 14 SQVFHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
S H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 3321 SDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DR 3378
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P
Sbjct: 3379 QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PER 3436
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
++ E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 3437 VTALEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 3486
Score = 186 (70.5 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 58/200 (29%), Positives = 103/200 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 3433 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 3490
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSED 136
L G+G+ +++ G S A T+DG +Y +G + +G+ EG+ H+ P
Sbjct: 3491 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARN--HN-RPQQIPV- 3544
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
+ + DVA G+ HTLAL ++ G N QL +G + V T ++V + K
Sbjct: 3545 --LAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQG-K 3600
Query: 197 NCPIVKLFAEHWNSARLSVP 216
N I ++ A +SA + P
Sbjct: 3601 N--IRQISAGRCHSAAWTAP 3618
Score = 140 (54.3 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 44/147 (29%), Positives = 70/147 (47%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI--SAG 91
+ CG + + G V + G GS G+LG +S D ++ I AL G V Q+ S G
Sbjct: 3289 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLT-VISALQGFVVTQLVTSCG 3346
Query: 92 G-WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
HS A T+ G +++WG + G++G G D P Q +VV ++CG
Sbjct: 3347 SDGHSMALTESGEVFSWGDGDYGKLG-HGNSD---RQRRPRQIEA---LQGEEVVQMSCG 3399
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+H+ + D L+ G +Y +L +G
Sbjct: 3400 FKHSAVVTSDGKLFTFGNGDYGRLGLG 3426
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 241 (89.9 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 63/175 (36%), Positives = 96/175 (54%)
Query: 14 SQVFHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
S H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4059 SDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DR 4116
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P
Sbjct: 4117 QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PER 4174
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
++ E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4175 VTALEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4224
Score = 202 (76.2 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 58/144 (40%), Positives = 80/144 (55%)
Query: 37 GFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWH 94
G D H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRH 522
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
SAA T+DG LY WG + G++G G + + P + D N+ +V+CGS HT
Sbjct: 523 SAAVTEDGELYTWGEGDFGRLG-HGDSNSR-NIPTLVK-----DISNVG--EVSCGSSHT 573
Query: 155 LALCDDN-SLWGCGWNEYNQLSMG 177
+AL D ++W G + +L G
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHG 597
Score = 188 (71.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 49/161 (30%), Positives = 83/161 (51%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAAT--RIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 185 (70.2 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 57/200 (28%), Positives = 103/200 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4171 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4228
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSED 136
L G+G+ +++ G S A T+DG +Y +G + +G+ EG+ H+ P
Sbjct: 4229 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARN--HN-RPQQIPV- 4282
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
+ + DVA G+ HTLAL ++ G N QL +G + V T ++V + K
Sbjct: 4283 --LAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQG-K 4338
Query: 197 NCPIVKLFAEHWNSARLSVP 216
N + ++ A +SA + P
Sbjct: 4339 N--VRQISAGRCHSAAWTAP 4356
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 45/160 (28%), Positives = 86/160 (53%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S + N+ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS-RNI-PTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V + P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRV-YKPKVIE-----ALQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVM 186
GS+ +LAL + WGCG +GCG S+ + +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL 654
Score = 153 (58.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 34/91 (37%), Positives = 51/91 (56%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 148 (57.2 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 42/139 (30%), Positives = 67/139 (48%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 140 (54.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 44/147 (29%), Positives = 70/147 (47%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI--SAG 91
+ CG + + G V + G GS G+LG +S D ++ I AL G V Q+ S G
Sbjct: 4027 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLT-VISALQGFVVTQLVTSCG 4084
Query: 92 G-WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
HS A T+ G +++WG + G++G G D P Q +VV ++CG
Sbjct: 4085 SDGHSMALTESGEVFSWGDGDYGKLG-HGNSD---RQRRPRQIEA---LQGEEVVQMSCG 4137
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+H+ + D L+ G +Y +L +G
Sbjct: 4138 FKHSAVVTSDGKLFTFGNGDYGRLGLG 4164
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 241 (89.9 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 63/175 (36%), Positives = 96/175 (54%)
Query: 14 SQVFHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
S H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4062 SDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DR 4119
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P
Sbjct: 4120 QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PER 4177
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
++ E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4178 VTALEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4227
Score = 202 (76.2 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 58/144 (40%), Positives = 80/144 (55%)
Query: 37 GFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWH 94
G D H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRH 522
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
SAA T+DG LY WG + G++G G + + P + D N+ +V+CGS HT
Sbjct: 523 SAAVTEDGELYTWGEGDFGRLG-HGDSNSR-NIPTLVK-----DISNVG--EVSCGSSHT 573
Query: 155 LALCDDN-SLWGCGWNEYNQLSMG 177
+AL D ++W G + +L G
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHG 597
Score = 188 (71.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 49/161 (30%), Positives = 83/161 (51%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAAT--RIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 185 (70.2 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 57/200 (28%), Positives = 103/200 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4174 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4231
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSED 136
L G+G+ +++ G S A T+DG +Y +G + +G+ EG+ H+ P
Sbjct: 4232 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARN--HN-RPQQIPV- 4285
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
+ + DVA G+ HTLAL ++ G N QL +G + V T ++V + K
Sbjct: 4286 --LAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQG-K 4341
Query: 197 NCPIVKLFAEHWNSARLSVP 216
N + ++ A +SA + P
Sbjct: 4342 N--VRQISAGRCHSAAWTAP 4359
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 45/160 (28%), Positives = 86/160 (53%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S + N+ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS-RNI-PTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V + P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRV-YKPKVIE-----ALQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVM 186
GS+ +LAL + WGCG +GCG S+ + +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL 654
Score = 153 (58.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 34/91 (37%), Positives = 51/91 (56%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 148 (57.2 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 42/139 (30%), Positives = 67/139 (48%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 140 (54.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 44/147 (29%), Positives = 70/147 (47%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI--SAG 91
+ CG + + G V + G GS G+LG +S D ++ I AL G V Q+ S G
Sbjct: 4030 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLT-VISALQGFVVTQLVTSCG 4087
Query: 92 G-WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
HS A T+ G +++WG + G++G G D P Q +VV ++CG
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLG-HGNSD---RQRRPRQIEA---LQGEEVVQMSCG 4140
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+H+ + D L+ G +Y +L +G
Sbjct: 4141 FKHSAVVTSDGKLFTFGNGDYGRLGLG 4167
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 241 (89.9 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 63/175 (36%), Positives = 96/175 (54%)
Query: 14 SQVFHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
S H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4064 SDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DR 4121
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P
Sbjct: 4122 QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PER 4179
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
++ E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4180 VTALEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Score = 202 (76.2 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 58/144 (40%), Positives = 80/144 (55%)
Query: 37 GFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWH 94
G D H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRH 522
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
SAA T+DG LY WG + G++G G + + P + D N+ +V+CGS HT
Sbjct: 523 SAAVTEDGELYTWGEGDFGRLG-HGDSNSR-NIPTLVK-----DISNVG--EVSCGSSHT 573
Query: 155 LALCDDN-SLWGCGWNEYNQLSMG 177
+AL D ++W G + +L G
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHG 597
Score = 189 (71.6 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 50/161 (31%), Positives = 83/161 (51%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VDV+
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAAT--RIVDVSI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 188 (71.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 58/210 (27%), Positives = 106/210 (50%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P++I
Sbjct: 4176 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKI 4233
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSED 136
L G+G+ +++ G S A T+DG +Y +G + +G+ EG+ H+ P
Sbjct: 4234 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARN--HN-RPQQIPV- 4287
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG--VSQVSVMTRLSVPEH 194
+ + DVA G+ HTLAL + ++ G N QL +G V + +++T L ++
Sbjct: 4288 --LAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ-GKN 4344
Query: 195 VKNCPIVKLFAEHWNSARLSVPEHAKDSSI 224
V+ + + W + VP A S+
Sbjct: 4345 VRQISAGRCHSAAWTAP--PVPPRAPGVSV 4372
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 45/160 (28%), Positives = 86/160 (53%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S + N+ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS-RNI-PTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V + P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRV-YKPKVIE-----ALQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVM 186
GS+ +LAL + WGCG +GCG S+ + +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL 654
Score = 152 (58.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + D++ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/139 (29%), Positives = 67/139 (48%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V +S G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
Score = 140 (54.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 44/147 (29%), Positives = 70/147 (47%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI--SAG 91
+ CG + + G V + G GS G+LG +S D ++ I AL G V Q+ S G
Sbjct: 4032 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLT-VISALQGFVVTQLVTSCG 4089
Query: 92 G-WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
HS A T+ G +++WG + G++G G D P Q +VV ++CG
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLG-HGNSD---RQRRPRQIEA---LQGEEVVQMSCG 4142
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+H+ + D L+ G +Y +L +G
Sbjct: 4143 FKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 241 (89.9 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 63/175 (36%), Positives = 96/175 (54%)
Query: 14 SQVFHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
S H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4065 SDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DR 4122
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P
Sbjct: 4123 QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PER 4180
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
++ E + ++ VACG HTLA+ D S+ W G +Y +L +G ++ S
Sbjct: 4181 VTALEGY-----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4230
Score = 197 (74.4 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 59/146 (40%), Positives = 81/146 (55%)
Query: 37 GFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWH 94
G D H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRH 522
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
SAA T+DG LY WG + G++G G + + P + D N+ +V+CGS HT
Sbjct: 523 SAAVTEDGELYTWGEGDFGRLG-HGDSNSR-NIPTLVK-----DISNVG--EVSCGSSHT 573
Query: 155 LALCDDN-SLWGCGWNEYNQLSMGCG 179
+AL D ++W G + N +G G
Sbjct: 574 IALSKDGRTVWSFGGGD-NVGKLGHG 598
Score = 186 (70.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 58/200 (29%), Positives = 103/200 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H LA++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4177 LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4234
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSED 136
L G+G+ +++ G S A T+DG +Y +G + +G+ EG+ H+ P
Sbjct: 4235 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARN--HN-RPQQIPV- 4288
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
+ + DVA G+ HTLAL ++ G N QL +G + V T ++V + K
Sbjct: 4289 --LAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQG-K 4344
Query: 197 NCPIVKLFAEHWNSARLSVP 216
N I ++ A +SA + P
Sbjct: 4345 N--IRQISAGRCHSAAWTAP 4362
Score = 168 (64.2 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 47/160 (29%), Positives = 81/160 (50%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S + N+ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS-RNI-PTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG W + G VG G D V+ P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRT-VWSFGGGDNVGKLGHGDTNRVYKPKVVE-----ALQGMFIRKVC 621
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVM 186
GS+ +LAL + WGCG +GCG S+ + +
Sbjct: 622 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL 655
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 45/162 (27%), Positives = 80/162 (49%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSR-GQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ + AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGH--GDTNRVYKPKVVEALQGMFIRKV 620
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 CAGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAAT--RIVDIS 672
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H DN ++ G N Q G ++ ++S
Sbjct: 673 IGDSHVWLFVMDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 714
Score = 140 (54.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 44/147 (29%), Positives = 70/147 (47%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI--SAG 91
+ CG + + G V + G GS G+LG +S D ++ I AL G V Q+ S G
Sbjct: 4033 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLT-VISALQGFVVTQLVTSCG 4090
Query: 92 G-WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
HS A T+ G +++WG + G++G G D P Q +VV ++CG
Sbjct: 4091 SDGHSMALTESGEVFSWGDGDYGKLG-HGNSD---RQRRPRQIEA---LQGEEVVQMSCG 4143
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+H+ + D L+ G +Y +L +G
Sbjct: 4144 FKHSAVVTSDGKLFTFGNGDYGRLGLG 4170
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 41/139 (29%), Positives = 65/139 (46%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 604 YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATA-LRPKLI 660
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H D +YAWG N+ GQ G +G + P +S +
Sbjct: 661 EELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 717
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 718 ---GIAIQQISAGTSHSLA 733
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G H + V++WGN S GQ G +S T +P+++
Sbjct: 657 PKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 715
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 716 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 746
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 233 (87.1 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 55/157 (35%), Positives = 80/157 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ GK P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL-GK-----EYPSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 220 (82.5 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 52/148 (35%), Positives = 77/148 (52%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ ++CG HCLAL +G F+WG S GQLG YPS + P+ +R+L G+ +
Sbjct: 139 ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQAS-----PQRVRSLEGIPLA 193
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
Q++AGG HS A + G ++ WG NN GQ+G+ + D P + +Q KVV
Sbjct: 194 QVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDR--ESPCHVKLLR---TQ--KVVY 246
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
++CG HT L ++ G QL
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 198 (74.8 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 49/150 (32%), Positives = 81/150 (54%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAV-PRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 175 (66.7 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 54/166 (32%), Positives = 77/166 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S + P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCGWNEYNQLSMG--CGV 180
+ V +ACG +HTLA + L +GCG QL G C V
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCGAK--GQLGTGHTCNV 335
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 52/176 (29%), Positives = 76/176 (43%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-------SEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P W S D
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKY 361
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSVMT-RLSVPEH 194
+V + G T LC +NS + NQ ++ ++ R + EH
Sbjct: 362 HIVKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEH 417
Score = 135 (52.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 48/162 (29%), Positives = 74/162 (45%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + + P + D Q+I V VACG H+LAL D L+ G
Sbjct: 64 GQLGHERE----GNKPEQIGALAD---QHI--VHVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
QL + V+V RL + + I+++ +W+ L+
Sbjct: 115 QLGLMTTEDSVAV-PRLI--QKLNQQTILQVSCGNWHCLALA 153
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 232 (86.7 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 55/157 (35%), Positives = 80/157 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ GK P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL-GK-----EFPSQTSPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 219 (82.2 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 49/144 (34%), Positives = 74/144 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++CG HCLAL +G F+WG S GQLG + P+ +R+L G+ + Q++A
Sbjct: 139 ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE-FPSQTSPQRVRSLEGIPLAQVAA 197
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG HS A + G ++ WG NN GQ+G+ + D P + +Q KVV ++CG
Sbjct: 198 GGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKLLR---TQ--KVVYISCG 250
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
HT L ++ G QL
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 196 (74.1 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 47/150 (31%), Positives = 81/150 (54%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D + ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAV-PRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 177 (67.4 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 56/166 (33%), Positives = 78/166 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S D P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL-SDEKDRE-SPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCGWNEYNQLSMG--CGV 180
+ V +ACG +HTLAL + L +GCG QL G C V
Sbjct: 295 E---VTQIACGRQHTLALVPSSGLIYAFGCGAK--GQLGTGHTCNV 335
Score = 159 (61.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 50/154 (32%), Positives = 69/154 (44%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-------SEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P W S D
Sbjct: 302 GRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKY 361
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQ 173
+VV + G T LC +NS + NQ
Sbjct: 362 RVVKQIFSGGDQTFVLCSTYENSSPAVDFRTVNQ 395
Score = 141 (54.7 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 48/162 (29%), Positives = 75/162 (46%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G S+ EP+ R +S + +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + + P + D Q+I + VACG H+LAL D L+ G
Sbjct: 64 GQLGHERE----GNKPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
QL + V+V RL + + I+++ +W+ L+
Sbjct: 115 QLGLMTTEDSVAV-PRLI--QKLNQQTILQVSCGNWHCLALA 153
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 223 (83.6 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 52/164 (31%), Positives = 81/164 (49%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+L V + G +H L L + G VFSWG G GQLG+ S +A +EPR + AL GL + +
Sbjct: 160 ELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGS--LEAELEPRLLEALQGLRMAE 217
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDFDSQNIKV 144
++AGGWHS ++ G +Y WGWN GQ+ + G V + + + +
Sbjct: 218 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELNDDGLRGEEAAL 277
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR 188
DV + H +A+ +L + + CG +V+TR
Sbjct: 278 ADVGAPA-HFIAIQPFPALLDLPLGS-DAVKASCGSRHTAVVTR 319
Score = 92 (37.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/73 (35%), Positives = 35/73 (47%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G V+ S G H+A T+ G LY WGW GQ+G + D D P E F +
Sbjct: 301 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHK---DSTSSD-QPCR-VEYFVERQ 355
Query: 142 IKVVDVACGSRHT 154
++V V CG +T
Sbjct: 356 LEVRAVTCGPWNT 368
Score = 76 (31.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIR 78
P ++ L + ++A G H + +++ G ++ WG GQL P+ SGT+ E
Sbjct: 204 PRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEAT 263
Query: 79 ALSGLGV 85
L+ G+
Sbjct: 264 ELNDDGL 270
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 232 (86.7 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 55/157 (35%), Positives = 80/157 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ D+ PR I+
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTT-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ GK P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL-GK-----EFPSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 219 (82.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 49/144 (34%), Positives = 74/144 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++CG HCLAL +G F+WG S GQLG + P+ +R+L G+ + Q++A
Sbjct: 139 ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGIPLAQVAA 197
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG HS A + G ++ WG NN GQ+G+ + D P + +Q KVV ++CG
Sbjct: 198 GGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKLLR---TQ--KVVYISCG 250
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
HT L ++ G QL
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 197 (74.4 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 48/150 (32%), Positives = 81/150 (54%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ ++
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIIH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAV-PRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 174 (66.3 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 55/166 (33%), Positives = 77/166 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S D P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL-SDEKDRE-SPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCGWNEYNQLSMG--CGV 180
+ V +ACG +HTLA + L +GCG QL G C V
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCGAR--GQLGTGHTCNV 335
Score = 154 (59.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 38/105 (36%), Positives = 54/105 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
G H+ A G +YA+G GQ+G ++ P W+
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWA 346
Score = 134 (52.2 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 47/162 (29%), Positives = 74/162 (45%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + + P + D Q+I + VACG H+LAL D L+ G
Sbjct: 64 GQLGHERE----GNKPEQIGALAD---QHI--IHVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
QL + V+V RL + + I+++ +W+ L+
Sbjct: 115 QLGLMTTEDSVAV-PRLI--QKLNQQTILQVSCGNWHCLALA 153
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 227 (85.0 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 65/184 (35%), Positives = 91/184 (49%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ AN PR + L V+ I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTANQPIPRRVTGCLQNKVVMNI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G+ G + P P + Q I+V VA
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGL-GSSG---NQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
CG HTL L D+ ++ G N Y QL G S S T + V E + I + H
Sbjct: 264 CGYAHTLVLTDEGQIYAWGANSYGQLGTG-NKSNQSYPTPVVV-EKDRIIEIAACHSAHT 321
Query: 209 NSAR 212
++A+
Sbjct: 322 SAAK 325
Score = 211 (79.3 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 52/165 (31%), Positives = 85/165 (51%)
Query: 20 PSRMDHFLDLVVTDIACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T +G VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG G + P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG-SGS---TANQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
QN V+++ACG ++A+ D ++ G+N QL +G +Q
Sbjct: 203 --QNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ 245
Score = 180 (68.4 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 50/152 (32%), Positives = 76/152 (50%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV +IACG +A+ G V+ WG GQLG SSG P +
Sbjct: 194 IPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P+ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY--PTPVVVEKD- 308
Query: 138 DSQNIKVVDVA-CGSRHTLALCDDNS---LWG 165
+++++A C S HT A +WG
Sbjct: 309 -----RIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 156 (60.0 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 47/153 (30%), Positives = 70/153 (45%)
Query: 35 ACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
AC F + L T +F G G LG + +EPR + +L+G + +S
Sbjct: 48 ACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGV--GDIQSTIEPRRLDSLTGKKIASLSY 105
Query: 91 G-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G G H T DG ++ WG N Q+G G + H P S + N +V++VAC
Sbjct: 106 GSGPHIVLATTDGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NKQVIEVAC 159
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
GS H+L L D ++ G+N Q+ G +Q
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ 192
Score = 141 (54.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P R+ + V +ACG+ H L LT EG +++WG S GQLG +G +N P +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG---TGNKSNQSYPTPV- 303
Query: 79 ALSGLGVVQISA-GGWH-SAARTQDGFLYAWGWNNGGQV 115
+ +++I+A H SAA+TQ G +Y WG G V
Sbjct: 304 VVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 342
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 231 (86.4 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 54/162 (33%), Positives = 85/162 (52%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME- 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG GTD +
Sbjct: 123 ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GTDCKKQT 179
Query: 74 -PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P+ +++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL- 236
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 --KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 224 (83.9 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 51/158 (32%), Positives = 83/158 (52%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + P + D
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECI-RVPRNIKSLSD--- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 158 (60.7 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 36/100 (36%), Positives = 57/100 (57%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V +I+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 158 (60.7 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 46/169 (27%), Positives = 75/169 (44%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + +A G H LT G +F WG GQLG + D + P +++
Sbjct: 181 PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-NDENDRYV-PNLLKS 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V I G H+AA T++G ++ +G GQ+G H+ +P + F+
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS----TSHEINPR---KVFEL 291
Query: 140 QNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVSVMT 187
V ++ACG +HT A + ++ G QL G ++ S T
Sbjct: 292 MGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/165 (30%), Positives = 75/165 (45%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E P + D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRK----KPEQVV---ALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCP---IVKLFAEHWNSARLS 214
QL + G + + VP ++K+ IV++ +++S LS
Sbjct: 115 QLGL-VGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 238 (88.8 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 62/175 (35%), Positives = 96/175 (54%)
Query: 14 SQVFHMPSRMDHFLDLVVTDI--ACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
S H+ + + VVT + +CG D H +ALT+ G VFSWG+G G+LG+ +S D
Sbjct: 4064 SDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNS--DR 4121
Query: 71 NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
PR+I AL G VVQ+S G HSA T DG L+ +G + G++G+ + + P
Sbjct: 4122 QRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL--PER 4179
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVS 184
++ E + ++ VACG HT+A+ D S+ W G +Y +L +G ++ S
Sbjct: 4180 VTALEGY-----QIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Score = 202 (76.2 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 58/144 (40%), Positives = 80/144 (55%)
Query: 37 GFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWH 94
G D H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRH 522
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
SAA T+DG LY WG + G++G G + + P + D N+ +V+CGS HT
Sbjct: 523 SAAVTEDGELYTWGEGDFGRLG-HGDSNSR-NIPTLVK-----DISNVG--EVSCGSSHT 573
Query: 155 LALCDDN-SLWGCGWNEYNQLSMG 177
+AL D ++W G + +L G
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHG 597
Score = 188 (71.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 49/161 (30%), Positives = 83/161 (51%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAAT--RIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H LAL DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 186 (70.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 56/200 (28%), Positives = 103/200 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ + +ACG +H +A++ +G +V+++G+G G+LG +S A P+++
Sbjct: 4176 LPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS--TAKSSPQKV 4233
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSED 136
L G+G+ +++ G S A T+DG +Y +G + +G+ EG+ H+ P
Sbjct: 4234 DILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARN--HN-RPQQVPV- 4289
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
+ + D+A G+ HTLAL ++ G N QL +G + V T ++V + K
Sbjct: 4290 --LSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG-HTNHVREPTLITVLQG-K 4345
Query: 197 NCPIVKLFAEHWNSARLSVP 216
N I ++ A +SA + P
Sbjct: 4346 N--IRQISAGRCHSAAWTAP 4363
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 45/160 (28%), Positives = 86/160 (53%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S + N+ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS-RNI-PTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V + P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRV-YKPKVIE-----ALQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVM 186
GS+ +LAL + WGCG +GCG S+ + +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL 654
Score = 152 (58.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 34/91 (37%), Positives = 51/91 (56%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCLAL+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 148 (57.2 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 41/139 (29%), Positives = 67/139 (48%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H A + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
+ + ++ G+ H+LA
Sbjct: 717 ---GVSIQQISAGTSHSLA 732
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 44/147 (29%), Positives = 70/147 (47%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI--SAG 91
+ CG + + G V + G GS G+LG +S D ++ I AL G V Q+ S G
Sbjct: 4032 VVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLT-VISALQGFVVTQLVTSCG 4089
Query: 92 G-WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
HS A T+ G +++WG + G++G G D P Q +VV ++CG
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLG-HGNSD---RQRRPRQIEA---LQGEEVVQMSCG 4142
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
+H+ + D L+ G +Y +L +G
Sbjct: 4143 FKHSAVVTADGKLFTFGNGDYGRLGLG 4169
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 220 (82.5 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 53/164 (32%), Positives = 82/164 (50%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIRALSGLGVV 86
+L V + G +H L L G VFSWG G GQLG+ GT +A +EPR + AL GL +
Sbjct: 160 ELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGH---GTLEAELEPRLLEALQGLRMA 216
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK--LDLVVHDPHPMSWSEDFDSQNIKV 144
+++AGGWHS ++ G +Y WGWN GQ+ + + + +ED + + V
Sbjct: 217 KVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAV 276
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR 188
D + H +A+ +L + + CG +V+TR
Sbjct: 277 ADAGAPA-HFIAIQPFPALLDLPLGS-DAVMASCGSRHTAVVTR 318
Score = 92 (37.4 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 25/73 (34%), Positives = 33/73 (45%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
G V S G H+A T+ G LY WGW GQ+G + L P E F +
Sbjct: 300 GSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSL----DRPCC-VEYFVERQ 354
Query: 142 IKVVDVACGSRHT 154
++V V CG +T
Sbjct: 355 LEVRAVTCGPWNT 367
Score = 81 (33.6 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIR 78
P ++ L + +A G H + L++ G ++ WG GQL P+ SGT+ E E
Sbjct: 204 PRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEAT 263
Query: 79 ALSGLGV 85
L+ G+
Sbjct: 264 ELNEDGL 270
Score = 71 (30.1 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V +CGSRHT + L+ GW +Y QL
Sbjct: 304 VMASCGSRHTAVVTRTGELYTWGWGKYGQL 333
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 236 (88.1 bits), Expect = 9.8e-18, P = 9.8e-18
Identities = 67/182 (36%), Positives = 95/182 (52%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ + S D PR
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD---RPRV 4087
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4088 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVE---- 4141
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVSVMTRL 189
Q +VVDVACGS TL L DD+++W G +Y +L S GC V ++ +T L
Sbjct: 4142 -ALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 4200
Query: 190 SV 191
V
Sbjct: 4201 GV 4202
Score = 219 (82.2 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 61/194 (31%), Positives = 93/194 (47%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 4190 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 4247
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4248 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVA-----A 4300
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGW------NEYNQLSMGCGVSQVSVMTRLSVP 192
Q KV VACGS HTLA G EYN L + +++ RL +
Sbjct: 4301 LQGKKVNRVACGSAHTLAWSTSKPA-SAGKLPAQVPMEYNHLQE---IPIIALRNRLLLL 4356
Query: 193 EHVKN--CPIVKLF 204
H+ CP + +F
Sbjct: 4357 HHISELFCPCIPMF 4370
Score = 207 (77.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 56/147 (38%), Positives = 79/147 (53%)
Query: 29 LVVTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ I L L VV
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVV 661
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y+WG + ++G G + H +P E Q KV+D
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLG-HGTEE---HVRYP-KLLEGL--QGKKVID 714
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 715 VAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 201 (75.8 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 59/155 (38%), Positives = 80/155 (51%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG--LG-- 84
+ IA D H LAL G V+SWG G G+LG+ T EP+ I A SG G
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKH 553
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV I+ G +SAA T +G LY WG N G++G D + PM + + +KV
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKV 606
Query: 145 VDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+DVACGS TLA+ ++ +W G +Y +L G
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 201 (75.8 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 57/156 (36%), Positives = 83/156 (53%)
Query: 31 VTDIACGF-D-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG D LALT EG+VFSWG+G G+LG G++ P+ I L+G GV QI
Sbjct: 3154 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQI 3211
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D+ V P + E + K+V VA
Sbjct: 3212 ECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVV---EGLRGK--KIVHVA 3264
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3265 VGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 3298
Score = 196 (74.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 52/149 (34%), Positives = 76/149 (51%)
Query: 31 VTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4205
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D V P + Q KV+ +A
Sbjct: 4206 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGSDDHV-RRPRQVQ-----GLQGKKVIAIA 4258
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4259 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4287
Score = 191 (72.3 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 56/168 (33%), Positives = 87/168 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPREI 77
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR+I
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQI 3040
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
ALS V V + +GG H+ A T DG +++WG + G++G +++ P + E
Sbjct: 3041 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC--DKPRLI---E 3095
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3096 ALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 46/152 (30%), Positives = 79/152 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H ALT G +++WG G G+LG+ + T ++P+ ++ L G V+Q++
Sbjct: 3102 IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ--LKPKMVKVLLGHRVIQVAC 3159
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T +G +++WG + G++G G + P + E + Q V +
Sbjct: 3160 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERLNGQG--VCQIE 3212
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
CG++ +LAL +W G +Y +L G V
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Score = 187 (70.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 64/191 (33%), Positives = 91/191 (47%)
Query: 2 CDHLASGPLKM-LSQ-VFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGS 57
C +G L + LS +P ++ VV +A G H ALT +G VFSWG G
Sbjct: 3017 CGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3076
Query: 58 RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
G+LG+ S + + +PR I AL + I+ G HSAA T G LY WG G++G
Sbjct: 3077 DGKLGH-FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG- 3133
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL- 174
G + P + +V+ VACGSR TLAL D+ ++ G ++ +L
Sbjct: 3134 HGD-NTTQLKPKMVKVLLGH-----RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3187
Query: 175 ---SMGCGVSQ 182
S GC + Q
Sbjct: 3188 RGGSEGCNIPQ 3198
Score = 185 (70.2 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 48/144 (33%), Positives = 76/144 (52%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
S+ ++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++
Sbjct: 3191 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVR 3247
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P+ + L G +V ++ G H A T G +YAWG N+ GQ G G V P +
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG-NGTTT-VNRKP---T 3302
Query: 133 WSEDFDSQNIKVVDVACGSRHTLA 156
+ + Q K+ VACGS H++A
Sbjct: 3303 LVQGLEGQ--KITRVACGSSHSVA 3324
Score = 182 (69.1 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 49/144 (34%), Positives = 78/144 (54%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T++G +++WG + G++G G D P + +D D VV V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSD-GCKTPKLIEKLQDLD-----VVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQ 688
Score = 177 (67.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 48/150 (32%), Positives = 76/150 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
D+++I V +ACG + A S W G
Sbjct: 760 DTKHI--VGIACGPAQSFAW-SSCSEWSIG 786
Score = 149 (57.5 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 54/173 (31%), Positives = 76/173 (43%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
D L+ G ++ WG+ RGQLG G + P AL+ L VQ+ G A
Sbjct: 3946 DWTLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAV 4003
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG LYA G+ GG++G+ G V P + E IK V V G +H LAL
Sbjct: 4004 TADGKLYATGYGAGGRLGIGGTES--VSTPTLL---ESIQHVFIKKVAVNSGGKHCLALS 4058
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
+ ++ W E +G G S R V E ++ +V + A +SA
Sbjct: 4059 SEGEVYS--WGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4107
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 45/161 (27%), Positives = 76/161 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ Y S + P+ ++
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQA--------YNSD----TLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSED 136
L+ +V+I+A G H A G +Y+WG +GG++G G D V + +P +S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG-HG--DTVPLEEPKVISAFSG 547
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 548 KQAGK-HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
Score = 126 (49.4 bits), Expect = 0.00032, P = 0.00032
Identities = 40/159 (25%), Positives = 74/159 (46%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + L + G A+T +G +++ G G+ G+LG GT++ P +
Sbjct: 3978 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGI--GGTESVSTPTLLE 4035
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + V +++GG H A + +G +Y+WG G++G G P
Sbjct: 4036 SIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRS-------PCDRPRV 4087
Query: 137 FDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+S + I+VVDVA G H+ + L+ G Y +L
Sbjct: 4088 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 228 (85.3 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 55/146 (37%), Positives = 75/146 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG H +AL+ +G VFSWG GS GQLG + DA PR I+ L+ ++QIS
Sbjct: 86 IVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTI-EDAVTVPRLIKKLNQQTILQISC 144
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G WH A DG + WG N+ GQ+G+ GK P S I + VA G
Sbjct: 145 GNWHCLALAADGQFFTWGQNSYGQLGL-GK-----ECPSQASPQRVKSLDGIPLAQVAAG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ AL +++G G N QL +
Sbjct: 199 GAHSFALSLSGAVFGWGKNSSGQLGL 224
Score = 212 (79.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 49/144 (34%), Positives = 74/144 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ I+CG HCLAL +G F+WG S GQLG + P+ +++L G+ + Q++A
Sbjct: 139 ILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKE-CPSQASPQRVKSLDGIPLAQVAA 197
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG HS A + G ++ WG N+ GQ+G+ + D P + SQ KVV ++CG
Sbjct: 198 GGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR--ESPCHVKLLR---SQ--KVVYISCG 250
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
HT L ++ G QL
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 212 (79.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 62/193 (32%), Positives = 102/193 (52%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ S G+ +P I AL+G +V
Sbjct: 33 DRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS----KPEPIGALAGQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G +++WG + GQ+G+ D V P + + + Q I + +
Sbjct: 89 VACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTV-PRLI---KKLNQQTI--LQI 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG--CGVSQVSVMTRLSVPEHVKNC---PIVK 202
+CG+ H LAL D + G N Y QL +G C SQ S P+ VK+ P+ +
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP-SQAS-------PQRVKSLDGIPLAQ 194
Query: 203 LFAEHWNSARLSV 215
+ A +S LS+
Sbjct: 195 VAAGGAHSFALSL 207
Score = 177 (67.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 55/166 (33%), Positives = 76/166 (45%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG S GQLG S D P ++
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL-SDERDRE-SPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCGWNEYNQLSMG--CGV 180
+ V +ACG HTLA + + +GCG QL G C V
Sbjct: 295 E---VSQIACGRHHTLAFVPSSGMIYAFGCGTR--GQLGTGHTCNV 335
Score = 161 (61.7 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 50/166 (30%), Positives = 75/166 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVSQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-------SEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P W S D+
Sbjct: 302 GRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKY 361
Query: 143 KVVD-VACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSV 185
+V + G T LC +NSL + N+ C ++ ++
Sbjct: 362 HIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETI 407
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 45/165 (27%), Positives = 73/165 (44%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G S+ EP+ + V +++ GG HS +DG +Y G N
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + P P+ Q+I V VACG H++AL D ++ G
Sbjct: 64 GQLGHESEGS----KPEPIG---ALAGQHI--VHVACGESHSVALSDQGQVFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNC---PIVKLFAEHWNSARLS 214
QL + ++ ++VP +K I+++ +W+ L+
Sbjct: 115 QLGL------TTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA 153
Score = 116 (45.9 bits), Expect = 0.00084, P = 0.00084
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ WG+++ GQ G+ L +++ +P + D +N+K +VACG H++ L +D +
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHD---RNVK--EVACGGNHSVFLLEDGEV 55
Query: 164 WGCGWNEYNQL 174
+ CG N QL
Sbjct: 56 YTCGLNTKGQL 66
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 228 (85.3 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 55/146 (37%), Positives = 75/146 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG H +AL+ +G VFSWG GS GQLG + DA PR I+ L+ ++QIS
Sbjct: 86 IVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTI-EDAVTVPRLIKKLNQQTILQISC 144
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G WH A DG + WG N+ GQ+G+ GK P S I + VA G
Sbjct: 145 GNWHCLALAADGQFFTWGQNSYGQLGL-GK-----ECPSQASPQRVKSLDGIPLAQVAAG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSM 176
H+ AL +++G G N QL +
Sbjct: 199 GAHSFALSLSGAVFGWGKNSSGQLGL 224
Score = 212 (79.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 49/144 (34%), Positives = 74/144 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ I+CG HCLAL +G F+WG S GQLG + P+ +++L G+ + Q++A
Sbjct: 139 ILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKE-CPSQASPQRVKSLDGIPLAQVAA 197
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG HS A + G ++ WG N+ GQ+G+ + D P + SQ KVV ++CG
Sbjct: 198 GGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR--ESPCHVKLLR---SQ--KVVYISCG 250
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
HT L ++ G QL
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 204 (76.9 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 60/193 (31%), Positives = 101/193 (52%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ S G+ +P + L+G +V
Sbjct: 33 DRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS----KPAWVGTLAGQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G +++WG + GQ+G+ D V P + + + Q I + +
Sbjct: 89 VACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTV-PRLI---KKLNQQTI--LQI 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG--CGVSQVSVMTRLSVPEHVKNC---PIVK 202
+CG+ H LAL D + G N Y QL +G C SQ S P+ VK+ P+ +
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP-SQAS-------PQRVKSLDGIPLAQ 194
Query: 203 LFAEHWNSARLSV 215
+ A +S LS+
Sbjct: 195 VAAGGAHSFALSL 207
Score = 177 (67.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 55/166 (33%), Positives = 76/166 (45%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG S GQLG S D P ++
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL-SDERDRE-SPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCGWNEYNQLSMG--CGV 180
+ V +ACG HTLA + + +GCG QL G C V
Sbjct: 295 E---VSQIACGRHHTLAFVPSSGMIYAFGCGTR--GQLGTGHTCNV 335
Score = 161 (61.7 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 50/166 (30%), Positives = 75/166 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVSQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-------SEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P W S D+
Sbjct: 302 GRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKY 361
Query: 143 KVVD-VACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSV 185
+V + G T LC +NSL + N+ C ++ ++
Sbjct: 362 HIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETI 407
Score = 133 (51.9 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 45/165 (27%), Positives = 73/165 (44%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G S+ EP+ + V +++ GG HS +DG +Y G N
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + P +W Q+I V VACG H++AL D ++ G
Sbjct: 64 GQLGHESE------GSKP-AWVGTLAGQHI--VHVACGESHSVALSDQGQVFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNC---PIVKLFAEHWNSARLS 214
QL + ++ ++VP +K I+++ +W+ L+
Sbjct: 115 QLGL------TTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA 153
Score = 116 (45.9 bits), Expect = 0.00084, P = 0.00084
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ WG+++ GQ G+ L +++ +P + D +N+K +VACG H++ L +D +
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHD---RNVK--EVACGGNHSVFLLEDGEV 55
Query: 164 WGCGWNEYNQL 174
+ CG N QL
Sbjct: 56 YTCGLNTKGQL 66
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 228 (85.3 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 54/157 (34%), Positives = 79/157 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ G +FSWG GS GQLG ++ + PR I+
Sbjct: 75 PEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAV-PRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ GK P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL-GK-----EFPSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + VA G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 218 (81.8 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 49/144 (34%), Positives = 74/144 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++CG HCLAL +G F+WG S GQLG + P+ +R+L G+ + Q++A
Sbjct: 139 ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGIPLAQVAA 197
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG HS A + G ++ WG NN GQ+G+ + D P + +Q KVV ++CG
Sbjct: 198 GGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDR--ESPCHVKLLR---AQ--KVVYISCG 250
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
HT L ++ G QL
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 198 (74.8 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 49/150 (32%), Positives = 81/150 (54%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG DH + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 33 DRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADEHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ + V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAV-PRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 177 (67.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 54/166 (32%), Positives = 77/166 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + +A G H AL+ G VF WG + GQLG S + P ++
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCGWNEYNQLSMG--CGV 180
+ V +ACG +HTLA + L +GCG QL G C V
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCGAR--GQLGTGHTCNV 335
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 52/176 (29%), Positives = 76/176 (43%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-------SEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P W S D
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKY 361
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSVMT-RLSVPEH 194
+V + G T LC +NS + NQ ++ ++ R + EH
Sbjct: 362 HIVKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEH 417
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/162 (29%), Positives = 74/162 (45%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G ++ EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E + + P + D ++I V VACG H+LAL D L+ G
Sbjct: 64 GQLGHERE----GNKPEQIGALAD---EHI--VHVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLS 214
QL + V+V RL + + I+++ +W+ L+
Sbjct: 115 QLGLMTTEESVAV-PRLI--QKLNQQTILQVSCGNWHCLALA 153
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 228 (85.3 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 54/157 (34%), Positives = 79/157 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ D + +ACG H LAL+ +G +FSWG GS GQLG + D+ PR I+
Sbjct: 75 PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTI-EDSVAVPRLIQK 133
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ ++Q+S G WH A DG + WG N+ GQ+G+ GK P S
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGL-GK-----EFPSQASPQRVRSL 187
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ I + V G H+ AL +++G G N QL +
Sbjct: 188 EGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 216 (81.1 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 49/144 (34%), Positives = 73/144 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++CG HCLAL +G F+WG S GQLG + P+ +R+L G+ + Q+ A
Sbjct: 139 ILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKE-FPSQASPQRVRSLEGIPLAQVVA 197
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG HS A + G ++ WG NN GQ+G+ + D P + +Q KVV ++CG
Sbjct: 198 GGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR--ESPCHVKLLR---TQ--KVVYISCG 250
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
HT L ++ G QL
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQL 274
Score = 198 (74.8 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 49/150 (32%), Positives = 81/150 (54%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D V ++ACG +H + L ++G V++ G ++GQLG+ G +P +I AL+ +V
Sbjct: 33 DRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQHIVH 88
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS A + G L++WG + GQ+G+ D V P + + + Q I + V
Sbjct: 89 VACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAV-PRLI---QKLNQQTI--LQV 142
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+CG+ H LAL D + G N + QL +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGRNSHGQLGLG 172
Score = 170 (64.9 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 54/166 (32%), Positives = 76/166 (45%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ + + + G H AL+ G VF WG + GQLG S D P ++
Sbjct: 181 PQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGL-SDEKDRE-SPCHVKL 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV IS G H+A T+ G ++ +G + GQ+G + D V +P E S
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV----NPRRVLELMGS 294
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCGWNEYNQLSMG--CGV 180
+ V +ACG +HTLA + L +GCG QL G C V
Sbjct: 295 E---VTQIACGRQHTLAFVPSSGLIYAFGCGAR--GQLGTGHTCNV 335
Score = 155 (59.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 52/176 (29%), Positives = 76/176 (43%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 301
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-------SEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P W S D
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKY 361
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSVMT-RLSVPEH 194
+V + G T LC +NS + NQ ++ ++ R + EH
Sbjct: 362 HIVKQIFSGGDQTFVLCSKYENSSPAVDFRMMNQAHYTSLINDETIAVWRQKLSEH 417
Score = 133 (51.9 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 41/117 (35%), Positives = 55/117 (47%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG S GQ G + EP+ +S V +++ GG HS +DG +Y G N
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
GQ+G E + + P + D Q+I V VACG H+LAL D L WG G
Sbjct: 64 GQLGHERE----GNKPEQIGALAD---QHI--VHVACGESHSLALSDQGQLFSWGAG 111
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 228 (85.3 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 51/158 (32%), Positives = 84/158 (53%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V ++ G H+ A G +YAWG ++ GQ+G++G + + P + D
Sbjct: 81 LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECI-RVPRNIKSLSD--- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 227 (85.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 54/162 (33%), Positives = 84/162 (51%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME- 73
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG G D +
Sbjct: 123 ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL---GIDCQKQT 179
Query: 74 -PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL- 236
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 --KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 160 (61.4 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 36/100 (36%), Positives = 57/100 (57%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V Q++ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 47/169 (27%), Positives = 74/169 (43%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + +A G H LT G +F WG GQLG + D + P +++
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-NDENDRYV-PNLLKS 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V I G H+AA T++G ++ +G GQ+G H+ +P + F+
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS----TSHEINPR---KVFEL 291
Query: 140 QNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVSVMT 187
V VACG +HT A + ++ G QL G ++ S T
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Score = 143 (55.4 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 51/165 (30%), Positives = 74/165 (44%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR V + G H+ DG +Y G N+
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E P + D+QNI V VACG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRK----KPEQVV---ALDAQNI--VAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCP---IVKLFAEHWNSARLS 214
QL + G + + VP ++K+ IV++ +++S LS
Sbjct: 115 QLGLQ-GSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 228 (85.3 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 51/158 (32%), Positives = 84/158 (53%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G++G + + P + D
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECI-RVPRNIKSLSD--- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 223 (83.6 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 52/160 (32%), Positives = 81/160 (50%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+ +P + D+ + +ACG+ H LAL++ VF WG GQLG P
Sbjct: 123 ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIE-CQKQTSP 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ + D V P+ +
Sbjct: 182 QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLL--- 236
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ SQ K+V + CG HT AL + ++ G Y QL
Sbjct: 237 KSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 161 (61.7 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 37/100 (37%), Positives = 57/100 (57%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 155 (59.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 46/169 (27%), Positives = 74/169 (43%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + +A G H LT G +F WG GQLG + D + P +++
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-NDENDRYV-PNLLKS 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V I G H+AA T++G ++ +G GQ+G H+ +P + F+
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS----TSHEINPR---KVFEL 291
Query: 140 QNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVSVMT 187
V +ACG +HT A + ++ G QL G ++ S T
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/165 (30%), Positives = 75/165 (45%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E P + D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRK----KPEQVV---ALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCP---IVKLFAEHWNSARLS 214
QL + G + + VP ++K+ IV++ +++S LS
Sbjct: 115 QLGLQ-GSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 228 (85.3 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 57/173 (32%), Positives = 89/173 (51%)
Query: 6 ASGPLKMLS--QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +QI+AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + +Q K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRTQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 224 (83.9 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 51/158 (32%), Positives = 83/158 (52%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + P + D
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECI-RVPRNIKSLSD--- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 160 (61.4 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 37/100 (37%), Positives = 57/100 (57%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 154 (59.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 47/169 (27%), Positives = 74/169 (43%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + IA G H LT G +F WG GQLG + D + P +++
Sbjct: 181 PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-NDENDRYV-PNLLKS 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V I G H+AA T++G ++ +G GQ+G H+ +P + F+
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS----TSHEINPR---KVFEL 291
Query: 140 QNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVSVMT 187
V +ACG +HT A + ++ G QL G ++ S T
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/165 (30%), Positives = 75/165 (45%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E P + D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRK----KPEQVV---ALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCP---IVKLFAEHWNSARLS 214
QL + G + + VP ++K+ IV++ +++S LS
Sbjct: 115 QLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 234 (87.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 65/182 (35%), Positives = 95/182 (52%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ + S D PR
Sbjct: 2802 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD---RPRV 2858
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 2859 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVE---- 2912
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVSVMTRL 189
Q +V+D+ACGS TL L DD+++W G +Y +L S GC V ++ +T L
Sbjct: 2913 -ALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 2971
Query: 190 SV 191
V
Sbjct: 2972 GV 2973
Score = 219 (82.2 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 61/194 (31%), Positives = 93/194 (47%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 2961 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 3018
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 3019 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVA-----A 3071
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGW------NEYNQLSMGCGVSQVSVMTRLSVP 192
Q KV VACGS HTLA G EYN L + +++ RL +
Sbjct: 3072 LQGKKVNRVACGSAHTLAWSTSKPA-SAGKLPAQVPMEYNHLQE---IPIIALRNRLLLL 3127
Query: 193 EHVKN--CPIVKLF 204
H+ CP + +F
Sbjct: 3128 HHISELFCPCIPMF 3141
Score = 203 (76.5 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 57/156 (36%), Positives = 83/156 (53%)
Query: 31 VTDIACGF-D-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG D LALT EG+VFSWG+G G+LG G++ P+ I L+G GV QI
Sbjct: 1962 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQI 2019
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D+ V P + E + K+V VA
Sbjct: 2020 ECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVV---EGLRGK--KIVHVA 2072
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 2073 VGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 2106
Score = 196 (74.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 53/149 (35%), Positives = 76/149 (51%)
Query: 31 VTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 2919 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 2976
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D V P + Q KV+ +A
Sbjct: 2977 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGSDDHV-RRPRQVQ-----GLQGKKVIAIA 3029
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 3030 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3058
Score = 194 (73.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 57/168 (33%), Positives = 87/168 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPREI 77
+PS + L V +A G A+T EG V+S G + G+LG SSGT PR+I
Sbjct: 1791 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQI 1848
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
ALS V V + +GG H+ A T DG +++WG + G++G +++ P + E
Sbjct: 1849 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC--DKPRLI---E 1903
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 1904 ALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 1949
Score = 189 (71.6 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 46/152 (30%), Positives = 79/152 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H ALT G +++WG G G+LG+ + T ++P+ ++ L G V+Q++
Sbjct: 1910 IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ--LKPKMVKVLLGHRVIQVAC 1967
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T +G +++WG + G++G G + P + E + Q V +
Sbjct: 1968 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERLNGQG--VCQIE 2020
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
CG++ +LAL +W G +Y +L G V
Sbjct: 2021 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2052
Score = 189 (71.6 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 64/191 (33%), Positives = 90/191 (47%)
Query: 2 CDHLASGPLK--MLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGS 57
C +G L M S +P ++ VV +A G H ALT +G VFSWG G
Sbjct: 1825 CGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 1884
Query: 58 RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
G+LG+ S + + +PR I AL + I+ G HSAA T G LY WG G++G
Sbjct: 1885 DGKLGH-FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG- 1941
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL- 174
G + P + +V+ VACGSR TLAL D+ ++ G ++ +L
Sbjct: 1942 HGD-NTTQLKPKMVKVLLGH-----RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 1995
Query: 175 ---SMGCGVSQ 182
S GC + Q
Sbjct: 1996 RGGSEGCNIPQ 2006
Score = 187 (70.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 48/144 (33%), Positives = 76/144 (52%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
S+ ++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++
Sbjct: 1999 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVR 2055
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P+ + L G +V ++ G H A T G +YAWG N+ GQ G G V P +
Sbjct: 2056 KPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG-NGTTT-VNRKP---T 2110
Query: 133 WSEDFDSQNIKVVDVACGSRHTLA 156
+ + Q K+ VACGS H++A
Sbjct: 2111 LVQGLEGQ--KITRVACGSSHSVA 2132
Score = 149 (57.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 54/173 (31%), Positives = 76/173 (43%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
D L+ G ++ WG+ RGQLG G + P AL+ L VQ+ G A
Sbjct: 2717 DWTLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAV 2774
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG LYA G+ GG++G+ G V P + E IK V V G +H LAL
Sbjct: 2775 TADGKLYATGYGAGGRLGIGGTES--VSTPTLL---ESIQHVFIKKVAVNSGGKHCLALS 2829
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
+ ++ W E +G G S R V E ++ +V + A +SA
Sbjct: 2830 SEGEVYS--WGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 2878
Score = 126 (49.4 bits), Expect = 0.00024, P = 0.00024
Identities = 40/159 (25%), Positives = 74/159 (46%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + L + G A+T +G +++ G G+ G+LG GT++ P +
Sbjct: 2749 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGI--GGTESVSTPTLLE 2806
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + V +++GG H A + +G +Y+WG G++G G P
Sbjct: 2807 SIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRS-------PCDRPRV 2858
Query: 137 FDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+S + I+VVDVA G H+ + L+ G Y +L
Sbjct: 2859 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 2897
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 234 (87.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 65/182 (35%), Positives = 95/182 (52%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ + S D PR
Sbjct: 2838 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD---RPRV 2894
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 2895 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVE---- 2948
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVSVMTRL 189
Q +V+D+ACGS TL L DD+++W G +Y +L S GC V ++ +T L
Sbjct: 2949 -ALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 3007
Query: 190 SV 191
V
Sbjct: 3008 GV 3009
Score = 219 (82.2 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 61/194 (31%), Positives = 93/194 (47%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 2997 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 3054
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 3055 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVA-----A 3107
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGW------NEYNQLSMGCGVSQVSVMTRLSVP 192
Q KV VACGS HTLA G EYN L + +++ RL +
Sbjct: 3108 LQGKKVNRVACGSAHTLAWSTSKPA-SAGKLPAQVPMEYNHLQE---IPIIALRNRLLLL 3163
Query: 193 EHVKN--CPIVKLF 204
H+ CP + +F
Sbjct: 3164 HHISELFCPCIPMF 3177
Score = 203 (76.5 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 57/156 (36%), Positives = 83/156 (53%)
Query: 31 VTDIACGF-D-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG D LALT EG+VFSWG+G G+LG G++ P+ I L+G GV QI
Sbjct: 1962 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQI 2019
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D+ V P + E + K+V VA
Sbjct: 2020 ECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVV---EGLRGK--KIVHVA 2072
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 2073 VGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 2106
Score = 196 (74.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 53/149 (35%), Positives = 76/149 (51%)
Query: 31 VTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 2955 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 3012
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D V P + Q KV+ +A
Sbjct: 3013 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGSDDHV-RRPRQVQ-----GLQGKKVIAIA 3065
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 3066 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3094
Score = 194 (73.4 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 57/168 (33%), Positives = 87/168 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPREI 77
+PS + L V +A G A+T EG V+S G + G+LG SSGT PR+I
Sbjct: 1791 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQI 1848
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
ALS V V + +GG H+ A T DG +++WG + G++G +++ P + E
Sbjct: 1849 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC--DKPRLI---E 1903
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 1904 ALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 1949
Score = 189 (71.6 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 46/152 (30%), Positives = 79/152 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H ALT G +++WG G G+LG+ + T ++P+ ++ L G V+Q++
Sbjct: 1910 IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ--LKPKMVKVLLGHRVIQVAC 1967
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T +G +++WG + G++G G + P + E + Q V +
Sbjct: 1968 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERLNGQG--VCQIE 2020
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
CG++ +LAL +W G +Y +L G V
Sbjct: 2021 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2052
Score = 189 (71.6 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 64/191 (33%), Positives = 90/191 (47%)
Query: 2 CDHLASGPLK--MLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGS 57
C +G L M S +P ++ VV +A G H ALT +G VFSWG G
Sbjct: 1825 CGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 1884
Query: 58 RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
G+LG+ S + + +PR I AL + I+ G HSAA T G LY WG G++G
Sbjct: 1885 DGKLGH-FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG- 1941
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL- 174
G + P + +V+ VACGSR TLAL D+ ++ G ++ +L
Sbjct: 1942 HGD-NTTQLKPKMVKVLLGH-----RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 1995
Query: 175 ---SMGCGVSQ 182
S GC + Q
Sbjct: 1996 RGGSEGCNIPQ 2006
Score = 187 (70.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 48/144 (33%), Positives = 76/144 (52%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
S+ ++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++
Sbjct: 1999 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVR 2055
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P+ + L G +V ++ G H A T G +YAWG N+ GQ G G V P +
Sbjct: 2056 KPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG-NGTTT-VNRKP---T 2110
Query: 133 WSEDFDSQNIKVVDVACGSRHTLA 156
+ + Q K+ VACGS H++A
Sbjct: 2111 LVQGLEGQ--KITRVACGSSHSVA 2132
Score = 149 (57.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 54/173 (31%), Positives = 76/173 (43%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
D L+ G ++ WG+ RGQLG G + P AL+ L VQ+ G A
Sbjct: 2753 DWTLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAV 2810
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG LYA G+ GG++G+ G V P + E IK V V G +H LAL
Sbjct: 2811 TADGKLYATGYGAGGRLGIGGTES--VSTPTLL---ESIQHVFIKKVAVNSGGKHCLALS 2865
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
+ ++ W E +G G S R V E ++ +V + A +SA
Sbjct: 2866 SEGEVYS--WGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 2914
Score = 126 (49.4 bits), Expect = 0.00024, P = 0.00024
Identities = 40/159 (25%), Positives = 74/159 (46%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + L + G A+T +G +++ G G+ G+LG GT++ P +
Sbjct: 2785 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGI--GGTESVSTPTLLE 2842
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + V +++GG H A + +G +Y+WG G++G G P
Sbjct: 2843 SIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRS-------PCDRPRV 2894
Query: 137 FDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+S + I+VVDVA G H+ + L+ G Y +L
Sbjct: 2895 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 2933
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 235 (87.8 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 66/182 (36%), Positives = 95/182 (52%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ + S D PR
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD---RPRV 4084
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4085 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVE---- 4138
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVSVMTRL 189
Q +VVD+ACGS TL L DD+++W G +Y +L S GC V ++ +T L
Sbjct: 4139 -ALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 4197
Query: 190 SV 191
V
Sbjct: 4198 GV 4199
Score = 217 (81.4 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 61/194 (31%), Positives = 93/194 (47%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 4187 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 4244
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4245 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVA-----A 4297
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGW------NEYNQLSMGCGVSQVSVMTRLSVP 192
Q KV VACGS HTLA G EYN L + +++ RL +
Sbjct: 4298 LQGKKVNRVACGSAHTLAWSTSKPA-SAGKLPAQVPMEYNHLQE---IPIIALRNRLLLL 4353
Query: 193 EHVKN--CPIVKLF 204
H+ CP + +F
Sbjct: 4354 HHLSELFCPCIPMF 4367
Score = 207 (77.9 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 56/147 (38%), Positives = 79/147 (53%)
Query: 29 LVVTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ I L L VV
Sbjct: 603 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVV 660
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y+WG + ++G G + H +P E Q KV+D
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLG-HGTEE---HVRYP-KLLEGL--QGKKVID 713
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 714 VAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 203 (76.5 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 57/156 (36%), Positives = 83/156 (53%)
Query: 31 VTDIACGF-D-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG D LALT EG+VFSWG+G G+LG G++ P+ I L+G GV QI
Sbjct: 3153 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQI 3210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D+ V P + E + K+V VA
Sbjct: 3211 ECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVV---EGLRGK--KIVHVA 3263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3264 VGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3297
Score = 201 (75.8 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 59/155 (38%), Positives = 80/155 (51%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG--LG-- 84
+ IA D H LAL G V+SWG G G+LG+ T EP+ I A SG G
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKH 552
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV I+ G +SAA T +G LY WG N G++G D + PM + + +KV
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKV 605
Query: 145 VDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+DVACGS TLA+ ++ +W G +Y +L G
Sbjct: 606 IDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 197 (74.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 53/149 (35%), Positives = 76/149 (51%)
Query: 31 VTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4202
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D V P + Q KV+ +A
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGSDDHV-RRPRQVQ-----GLQGKKVIAIA 4255
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4256 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 191 (72.3 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 56/168 (33%), Positives = 87/168 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPREI 77
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR+I
Sbjct: 2982 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQI 3039
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
ALS V V + +GG H+ A T DG +++WG + G++G +++ P + E
Sbjct: 3040 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC--DKPRLI---E 3094
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3095 ALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3140
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 46/152 (30%), Positives = 79/152 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H ALT G +++WG G G+LG+ + T ++P+ ++ L G V+Q++
Sbjct: 3101 IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ--LKPKMVKVLLGHRVIQVAC 3158
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T +G +++WG + G++G G + P + E + Q V +
Sbjct: 3159 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERLNGQG--VCQIE 3211
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
CG++ +LAL +W G +Y +L G V
Sbjct: 3212 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3243
Score = 187 (70.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 48/144 (33%), Positives = 76/144 (52%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
S+ ++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++
Sbjct: 3190 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVR 3246
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P+ + L G +V ++ G H A T G +YAWG N+ GQ G G V P +
Sbjct: 3247 KPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG-NGTTT-VNRKP---T 3301
Query: 133 WSEDFDSQNIKVVDVACGSRHTLA 156
+ + Q K+ VACGS H++A
Sbjct: 3302 LVQGLEGQ--KITRVACGSSHSVA 3323
Score = 186 (70.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 63/191 (32%), Positives = 90/191 (47%)
Query: 2 CDHLASGPLKM--LSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGS 57
C +G L + S +P ++ VV +A G H ALT +G VFSWG G
Sbjct: 3016 CGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3075
Query: 58 RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
G+LG+ S + + +PR I AL + I+ G HSAA T G LY WG G++G
Sbjct: 3076 DGKLGH-FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG- 3132
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL- 174
G + P + +V+ VACGSR TLAL D+ ++ G ++ +L
Sbjct: 3133 HGD-NTTQLKPKMVKVLLGH-----RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3186
Query: 175 ---SMGCGVSQ 182
S GC + Q
Sbjct: 3187 RGGSEGCNIPQ 3197
Score = 182 (69.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 49/144 (34%), Positives = 78/144 (54%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 610
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T++G +++WG + G++G G D P + +D D VV V
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSD-GCKTPKLIEKLQDLD-----VVKVR 663
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQ 687
Score = 177 (67.4 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 48/150 (32%), Positives = 76/150 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 704
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPAALP-GL 758
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
D+++I V +ACG + A S W G
Sbjct: 759 DTKHI--VGIACGPAQSFAW-SSCSEWSIG 785
Score = 149 (57.5 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 54/173 (31%), Positives = 76/173 (43%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
D L+ G ++ WG+ RGQLG G + P AL+ L VQ+ G A
Sbjct: 3943 DWTLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAV 4000
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG LYA G+ GG++G+ G V P + E IK V V G +H LAL
Sbjct: 4001 TADGKLYATGYGAGGRLGIGGTES--VSTPTLL---ESIQHVFIKKVAVNSGGKHCLALS 4055
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
+ ++ W E +G G S R V E ++ +V + A +SA
Sbjct: 4056 SEGEVYS--WGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4104
Score = 126 (49.4 bits), Expect = 0.00032, P = 0.00032
Identities = 40/159 (25%), Positives = 74/159 (46%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + L + G A+T +G +++ G G+ G+LG GT++ P +
Sbjct: 3975 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGI--GGTESVSTPTLLE 4032
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + V +++GG H A + +G +Y+WG G++G G P
Sbjct: 4033 SIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRS-------PCDRPRV 4084
Query: 137 FDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+S + I+VVDVA G H+ + L+ G Y +L
Sbjct: 4085 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123
Score = 37 (18.1 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 199 PIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGIL 237
P++ ++A+ N A + +H S + FAG + +L
Sbjct: 2278 PMLSVWAQLVNLAGSKLEKHKIKKSTKQAFAGQVDLDLL 2316
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 227 (85.0 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 56/173 (32%), Positives = 89/173 (51%)
Query: 6 ASGPLKMLS--QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + +Q K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRTQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 224 (83.9 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 51/158 (32%), Positives = 83/158 (52%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + P + D
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECI-RVPRNIKSLSD--- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 160 (61.4 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 37/100 (37%), Positives = 57/100 (57%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 46/169 (27%), Positives = 74/169 (43%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + +A G H LT G +F WG GQLG + D + P +++
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-NDENDRYV-PNLLKS 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V I G H+AA T++G ++ +G GQ+G H+ +P + F+
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS----TSHEINPR---KVFEL 291
Query: 140 QNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVSVMT 187
V +ACG +HT A + ++ G QL G ++ S T
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/165 (30%), Positives = 75/165 (45%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E P + D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRK----KPEQVV---ALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCP---IVKLFAEHWNSARLS 214
QL + G + + VP ++K+ IV++ +++S LS
Sbjct: 115 QLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 227 (85.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 56/173 (32%), Positives = 89/173 (51%)
Query: 6 ASGPLKMLS--QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
+ G L +L + +P + D+ + +ACG+ H LAL++ VF WG GQLG
Sbjct: 112 SDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 64 PSSGTDANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL 121
G D + P+ I++L G+ +Q++AGG HS T G ++ WG N GQ+G+ +
Sbjct: 172 ---GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D V P+ + + +Q K+V + CG HT AL + ++ G Y QL
Sbjct: 229 DRYV--PNLL---KSLRTQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 224 (83.9 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 51/158 (32%), Positives = 83/158 (52%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D F++ V D+ CG H + + +G V++ G GQLG+ S +P ++ A
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS----RKKPEQVVA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG ++ GQ+G+ G + + P + D
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECI-RVPRNIKSLSD--- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 160 (61.4 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 37/100 (37%), Positives = 57/100 (57%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + + I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V QI+ G H++A G +Y++G GQ+G
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 46/169 (27%), Positives = 74/169 (43%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + +A G H LT G +F WG GQLG + D + P +++
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-NDENDRYV-PNLLKS 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V I G H+AA T++G ++ +G GQ+G H+ +P + F+
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS----TSHEINPR---KVFEL 291
Query: 140 QNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVSVMT 187
V +ACG +HT A + ++ G QL G ++ S T
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/165 (30%), Positives = 75/165 (45%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ V + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E P + D+QNI V V+CG HTLAL D ++ G +
Sbjct: 64 GQLGHEKSRK----KPEQVV---ALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCP---IVKLFAEHWNSARLS 214
QL + G + + VP ++K+ IV++ +++S LS
Sbjct: 115 QLGL-LGSEEC-----IRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 234 (87.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 65/182 (35%), Positives = 95/182 (52%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ + S D PR
Sbjct: 3973 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD---RPRV 4029
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4030 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVE---- 4083
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVSVMTRL 189
Q +V+D+ACGS TL L DD+++W G +Y +L S GC V ++ +T L
Sbjct: 4084 -ALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 4142
Query: 190 SV 191
V
Sbjct: 4143 GV 4144
Score = 219 (82.2 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 61/194 (31%), Positives = 93/194 (47%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 4132 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 4189
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4190 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVA-----A 4242
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGW------NEYNQLSMGCGVSQVSVMTRLSVP 192
Q KV VACGS HTLA G EYN L + +++ RL +
Sbjct: 4243 LQGKKVNRVACGSAHTLAWSTSKPA-SAGKLPAQVPMEYNHLQE---IPIIALRNRLLLL 4298
Query: 193 EHVKN--CPIVKLF 204
H+ CP + +F
Sbjct: 4299 HHISELFCPCIPMF 4312
Score = 206 (77.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 55/147 (37%), Positives = 79/147 (53%)
Query: 29 LVVTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ I L L V+
Sbjct: 549 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVI 606
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y+WG + ++G G + H +P E Q KV+D
Sbjct: 607 KVRCGSQFSIALTKDGQVYSWGKGDNQRLG-HGTEE---HVRYP-KLLEGL--QGKKVID 659
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 660 VAAGSTHCLALTEDSEVHSWGSNDQCQ 686
Score = 203 (76.5 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 57/156 (36%), Positives = 83/156 (53%)
Query: 31 VTDIACGF-D-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG D LALT EG+VFSWG+G G+LG G++ P+ I L+G GV QI
Sbjct: 3097 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQI 3154
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D+ V P + E + K+V VA
Sbjct: 3155 ECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVV---EGLRGK--KIVHVA 3207
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3208 VGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3241
Score = 201 (75.8 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 59/155 (38%), Positives = 80/155 (51%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG--LG-- 84
+ IA D H LAL G V+SWG G G+LG+ T EP+ I A SG G
Sbjct: 441 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKH 498
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV I+ G +SAA T +G LY WG N G++G D + PM + + +KV
Sbjct: 499 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKV 551
Query: 145 VDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+DVACGS TLA+ ++ +W G +Y +L G
Sbjct: 552 IDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 586
Score = 196 (74.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 53/149 (35%), Positives = 76/149 (51%)
Query: 31 VTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4090 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4147
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D V P + Q KV+ +A
Sbjct: 4148 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGSDDHV-RRPRQVQ-----GLQGKKVIAIA 4200
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4201 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4229
Score = 194 (73.4 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 57/168 (33%), Positives = 87/168 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPREI 77
+PS + L V +A G A+T EG V+S G + G+LG SSGT PR+I
Sbjct: 2926 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQI 2983
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
ALS V V + +GG H+ A T DG +++WG + G++G +++ P + E
Sbjct: 2984 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC--DKPRLI---E 3038
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3039 ALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3084
Score = 189 (71.6 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 46/152 (30%), Positives = 79/152 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H ALT G +++WG G G+LG+ + T ++P+ ++ L G V+Q++
Sbjct: 3045 IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ--LKPKMVKVLLGHRVIQVAC 3102
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T +G +++WG + G++G G + P + E + Q V +
Sbjct: 3103 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERLNGQG--VCQIE 3155
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
CG++ +LAL +W G +Y +L G V
Sbjct: 3156 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3187
Score = 189 (71.6 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 64/191 (33%), Positives = 90/191 (47%)
Query: 2 CDHLASGPLK--MLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGS 57
C +G L M S +P ++ VV +A G H ALT +G VFSWG G
Sbjct: 2960 CGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3019
Query: 58 RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
G+LG+ S + + +PR I AL + I+ G HSAA T G LY WG G++G
Sbjct: 3020 DGKLGH-FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG- 3076
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL- 174
G + P + +V+ VACGSR TLAL D+ ++ G ++ +L
Sbjct: 3077 HGD-NTTQLKPKMVKVLLGH-----RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3130
Query: 175 ---SMGCGVSQ 182
S GC + Q
Sbjct: 3131 RGGSEGCNIPQ 3141
Score = 187 (70.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 48/144 (33%), Positives = 76/144 (52%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
S+ ++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++
Sbjct: 3134 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVR 3190
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P+ + L G +V ++ G H A T G +YAWG N+ GQ G G V P +
Sbjct: 3191 KPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG-NGTTT-VNRKP---T 3245
Query: 133 WSEDFDSQNIKVVDVACGSRHTLA 156
+ + Q K+ VACGS H++A
Sbjct: 3246 LVQGLEGQ--KITRVACGSSHSVA 3267
Score = 181 (68.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 48/144 (33%), Positives = 78/144 (54%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 499 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 556
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T++G +++WG + G++G G D P + +D D V+ V
Sbjct: 557 GSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSD-GCKTPKLIEKLQDLD-----VIKVR 609
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 610 CGSQFSIALTKDGQVYSWGKGDNQ 633
Score = 176 (67.0 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 48/150 (32%), Positives = 76/150 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 594 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 650
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 651 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPTALP-GL 704
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
D+++I V +ACG + A S W G
Sbjct: 705 DTKHI--VGIACGPAQSFAW-SSCSEWSIG 731
Score = 149 (57.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 54/173 (31%), Positives = 76/173 (43%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
D L+ G ++ WG+ RGQLG G + P AL+ L VQ+ G A
Sbjct: 3888 DWTLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAV 3945
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG LYA G+ GG++G+ G V P + E IK V V G +H LAL
Sbjct: 3946 TADGKLYATGYGAGGRLGIGGTES--VSTPTLL---ESIQHVFIKKVAVNSGGKHCLALS 4000
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
+ ++ W E +G G S R V E ++ +V + A +SA
Sbjct: 4001 SEGEVYS--WGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4049
Score = 126 (49.4 bits), Expect = 0.00032, P = 0.00032
Identities = 40/159 (25%), Positives = 74/159 (46%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + L + G A+T +G +++ G G+ G+LG GT++ P +
Sbjct: 3920 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGI--GGTESVSTPTLLE 3977
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + V +++GG H A + +G +Y+WG G++G G P
Sbjct: 3978 SIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRS-------PCDRPRV 4029
Query: 137 FDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+S + I+VVDVA G H+ + L+ G Y +L
Sbjct: 4030 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4068
Score = 44 (20.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 199 PIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGILVQSQ 241
P++ ++AE N A + +H S + FAG + +L Q
Sbjct: 2222 PMLSVWAELVNLAGSKLEKHKTKKSAKQAFAGQVDLDLLRSQQ 2264
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 234 (87.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 65/182 (35%), Positives = 95/182 (52%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ + S D PR
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD---RPRV 4086
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L G+ VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4087 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVE---- 4140
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVSVMTRL 189
Q +V+D+ACGS TL L DD+++W G +Y +L S GC V ++ +T L
Sbjct: 4141 -ALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 4199
Query: 190 SV 191
V
Sbjct: 4200 GV 4201
Score = 219 (82.2 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 61/194 (31%), Positives = 93/194 (47%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 4189 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 4246
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4247 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVA-----A 4299
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGW------NEYNQLSMGCGVSQVSVMTRLSVP 192
Q KV VACGS HTLA G EYN L + +++ RL +
Sbjct: 4300 LQGKKVNRVACGSAHTLAWSTSKPA-SAGKLPAQVPMEYNHLQE---IPIIALRNRLLLL 4355
Query: 193 EHVKN--CPIVKLF 204
H+ CP + +F
Sbjct: 4356 HHISELFCPCIPMF 4369
Score = 206 (77.6 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 55/147 (37%), Positives = 79/147 (53%)
Query: 29 LVVTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ I L L V+
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVI 661
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y+WG + ++G G + H +P E Q KV+D
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLG-HGTEE---HVRYP-KLLEGL--QGKKVID 714
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 715 VAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 203 (76.5 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 57/156 (36%), Positives = 83/156 (53%)
Query: 31 VTDIACGF-D-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG D LALT EG+VFSWG+G G+LG G++ P+ I L+G GV QI
Sbjct: 3154 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQI 3211
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D+ V P + E + K+V VA
Sbjct: 3212 ECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVV---EGLRGK--KIVHVA 3264
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3265 VGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVN 3298
Score = 201 (75.8 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 59/155 (38%), Positives = 80/155 (51%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG--LG-- 84
+ IA D H LAL G V+SWG G G+LG+ T EP+ I A SG G
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKH 553
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV I+ G +SAA T +G LY WG N G++G D + PM + + +KV
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKV 606
Query: 145 VDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+DVACGS TLA+ ++ +W G +Y +L G
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 196 (74.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 53/149 (35%), Positives = 76/149 (51%)
Query: 31 VTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4147 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4204
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D V P + Q KV+ +A
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGSDDHV-RRPRQVQ-----GLQGKKVIAIA 4257
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4258 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286
Score = 194 (73.4 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 57/168 (33%), Positives = 87/168 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPREI 77
+PS + L V +A G A+T EG V+S G + G+LG SSGT PR+I
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQI 3040
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
ALS V V + +GG H+ A T DG +++WG + G++G +++ P + E
Sbjct: 3041 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC--DKPRLI---E 3095
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3096 ALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 46/152 (30%), Positives = 79/152 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H ALT G +++WG G G+LG+ + T ++P+ ++ L G V+Q++
Sbjct: 3102 IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ--LKPKMVKVLLGHRVIQVAC 3159
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T +G +++WG + G++G G + P + E + Q V +
Sbjct: 3160 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERLNGQG--VCQIE 3212
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
CG++ +LAL +W G +Y +L G V
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 64/191 (33%), Positives = 90/191 (47%)
Query: 2 CDHLASGPLK--MLSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGS 57
C +G L M S +P ++ VV +A G H ALT +G VFSWG G
Sbjct: 3017 CGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3076
Query: 58 RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
G+LG+ S + + +PR I AL + I+ G HSAA T G LY WG G++G
Sbjct: 3077 DGKLGH-FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG- 3133
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL- 174
G + P + +V+ VACGSR TLAL D+ ++ G ++ +L
Sbjct: 3134 HGD-NTTQLKPKMVKVLLGH-----RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3187
Query: 175 ---SMGCGVSQ 182
S GC + Q
Sbjct: 3188 RGGSEGCNIPQ 3198
Score = 187 (70.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 48/144 (33%), Positives = 76/144 (52%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
S+ ++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++
Sbjct: 3191 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVR 3247
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P+ + L G +V ++ G H A T G +YAWG N+ GQ G G V P +
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG-NGTTT-VNRKP---T 3302
Query: 133 WSEDFDSQNIKVVDVACGSRHTLA 156
+ + Q K+ VACGS H++A
Sbjct: 3303 LVQGLEGQ--KITRVACGSSHSVA 3324
Score = 181 (68.8 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 48/144 (33%), Positives = 78/144 (54%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T++G +++WG + G++G G D P + +D D V+ V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSD-GCKTPKLIEKLQDLD-----VIKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQ 688
Score = 179 (68.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 49/150 (32%), Positives = 76/150 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P +
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEPTALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
DS++I V +ACG + A S W G
Sbjct: 760 DSKHI--VGIACGPAQSFAW-SSCSEWSIG 786
Score = 149 (57.5 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 54/173 (31%), Positives = 76/173 (43%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
D L+ G ++ WG+ RGQLG G + P AL+ L VQ+ G A
Sbjct: 3945 DWTLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAV 4002
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG LYA G+ GG++G+ G V P + E IK V V G +H LAL
Sbjct: 4003 TADGKLYATGYGAGGRLGIGGTES--VSTPTLL---ESIQHVFIKKVAVNSGGKHCLALS 4057
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
+ ++ W E +G G S R V E ++ +V + A +SA
Sbjct: 4058 SEGEVYS--WGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSA 4106
Score = 126 (49.4 bits), Expect = 0.00032, P = 0.00032
Identities = 40/159 (25%), Positives = 74/159 (46%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + L + G A+T +G +++ G G+ G+LG GT++ P +
Sbjct: 3977 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGI--GGTESVSTPTLLE 4034
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + V +++GG H A + +G +Y+WG G++G G P
Sbjct: 4035 SIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRS-------PCDRPRV 4086
Query: 137 FDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+S + I+VVDVA G H+ + L+ G Y +L
Sbjct: 4087 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125
Score = 42 (19.8 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 199 PIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGILVQSQ 241
P++ ++AE N A + +H S FAG + +L Q
Sbjct: 2279 PMLSVWAELVNLAGSKLEKHKTKKSAKPAFAGQVDLDLLRSQQ 2321
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 222 (83.2 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 64/184 (34%), Positives = 90/184 (48%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRA-LSGLGVVQI 88
V ++ACG H L LT +G VF+WG + GQ+G SG+ N PR + L VV I
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G A G +Y WG+N GQ+G+ G + P P + Q I+V VA
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGL-GNSG---NQPTPCRVAA---LQGIRVQRVA 263
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
CG HTL L D+ ++ G N Y QL G S S T ++V E + I + H
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTG-NKSNQSYPTPVTV-EKDRIIEIAACHSTHT 321
Query: 209 NSAR 212
++A+
Sbjct: 322 SAAK 325
Score = 210 (79.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 54/160 (33%), Positives = 82/160 (51%)
Query: 20 PSRMDHFLDLVVTDIACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+D + ++ G H + T EG VF+WG+ + QLG + T+ + P I
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG--NGTTNHGLVPCHIS 146
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
LS V++++ G +HS T DG ++AWG+NN GQVG G V+ P P +
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG-SGS---TVNQPIPRRVTGCL 202
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
QN VV +ACG +A+ D ++ G+N QL +G
Sbjct: 203 --QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 240
Score = 188 (71.2 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 50/152 (32%), Positives = 77/152 (50%)
Query: 19 MPSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P R+ L + VV IACG C+A+ G V+ WG GQLG +SG P +
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT--PCRV 251
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL G+ V +++ G H+ T +G +YAWG N+ GQ+G K + P P++ +D
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY--PTPVTVEKD- 308
Query: 138 DSQNIKVVDVA-CGSRHTLALCDDNS---LWG 165
+++++A C S HT A +WG
Sbjct: 309 -----RIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 152 (58.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 47/153 (30%), Positives = 71/153 (46%)
Query: 35 ACGF----DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
AC F + L T +F G G LG + +EPR + +L+G + +S
Sbjct: 48 ACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKIACLSY 105
Query: 91 G-GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
G G H T +G ++ WG N Q+G G + H P S + N +V++VAC
Sbjct: 106 GSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTN---HGLVPCHISTNLS--NKQVIEVAC 159
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
GS H+L L D ++ G+N Q+ G V+Q
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ 192
Score = 143 (55.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 37/99 (37%), Positives = 52/99 (52%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P R+ + V +ACG+ H L LT EG V++WG S GQLG +G +N P +
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG---TGNKSNQSYPTPVT 304
Query: 79 ALSGLGVVQISA-GGWH-SAARTQDGFLYAWGWNNGGQV 115
+++I+A H SAA+TQ G +Y WG G V
Sbjct: 305 VEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 218 (81.8 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 49/141 (34%), Positives = 79/141 (56%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
DL + DIA G H ALT +G V+ WG G G+LG + + M P+++ L+ ++Q
Sbjct: 247 DLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQ 306
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK------LDLVVHDPHPM-SWSEDFDSQ 140
+S GG HS A T+DG ++++G + G++G K L+L + P P S++ + +
Sbjct: 307 VSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEE 366
Query: 141 NIK--VVDVACGSRHTLALCD 159
K +ACG RHTLA+ +
Sbjct: 367 EGKWSAKSIACGGRHTLAIVE 387
Score = 209 (78.6 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 49/146 (33%), Positives = 76/146 (52%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G H LAL ++G + +WGN GQLG + T P ++ L L +V I+AGGW
Sbjct: 201 IAVGAFHNLALEEDGRLLAWGNNEYGQLG--TGDTQPTSHPVPVQGLDDLTLVDIAAGGW 258
Query: 94 HSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
HS A T G +Y WG G++G+ K +V P ++ + D ++ V+CG
Sbjct: 259 HSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMV--PQKVNLLAEED-----IIQVSCGG 311
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMG 177
H++AL D ++ G ++ +L G
Sbjct: 312 THSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 183 (69.5 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 50/167 (29%), Positives = 79/167 (47%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPREIRALSGLGVVQIS 89
V + G + LA+ +G +F+WG RG LG+ P + T+ N+ P ++AL+ + + Q +
Sbjct: 40 VRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTE-NI-PSRVKALANVKITQAA 97
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GGWH A G YAWG N GQ G E D + + + V VA
Sbjct: 98 IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAA 157
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
G H++ L + +W W + G + Q+SV R+ E+V+
Sbjct: 158 GGTHSVVLTREGHVWT--WGQ--PWPPG-DIKQISVPVRVQGLENVR 199
Score = 179 (68.1 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 63/203 (31%), Positives = 96/203 (47%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANMEPRE 76
++PSR+ ++ +T A G HCLA+ +G ++WG GQ G P R+
Sbjct: 80 NIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRD 139
Query: 77 I----RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
I R L V Q++AGG HS T++G + W W GQ G + + P +
Sbjct: 140 IVIPKRCAPKLTVRQVAAGGTHSVVLTREG--HVWTW---GQPWPPGDIKQI-SVPVRVQ 193
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
E N++++ A G+ H LAL +D L G NEY QL G G +Q T VP
Sbjct: 194 GLE-----NVRLI--AVGAFHNLALEEDGRLLAWGNNEYGQL--GTGDTQP---TSHPVP 241
Query: 193 -EHVKNCPIVKLFAEHWNSARLS 214
+ + + +V + A W+S L+
Sbjct: 242 VQGLDDLTLVDIAAGGWHSTALT 264
Score = 148 (57.2 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 41/130 (31%), Positives = 59/130 (45%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG 108
+ +WG+G GQLG GT+ E + AL V + +G +S A DG ++ WG
Sbjct: 7 IIAWGSGEDGQLGI---GTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG 63
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQ-----NIKVVDVACGSRHTLALCDDNSL 163
WN G +G H P + E+ S+ N+K+ A G H LA+ D
Sbjct: 64 WNQRGTLG---------HQPETKT--ENIPSRVKALANVKITQAAIGGWHCLAVDDQGRA 112
Query: 164 WGCGWNEYNQ 173
+ G NEY Q
Sbjct: 113 YAWGGNEYGQ 122
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 226 (84.6 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 53/146 (36%), Positives = 79/146 (54%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANMEPREIRALSGLGVVQI 88
V IACG H +ALT +G +F WG + GQLG +GT + PR +++L G+ V QI
Sbjct: 120 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQS---PRHLQSLCGIPVAQI 176
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
SAGG HS + G ++ WG N+ GQ+G+ D V P ++ + K+V ++
Sbjct: 177 SAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFV--PTVVN-----SLKRKKIVSIS 229
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
CG HT AL +++ G + QL
Sbjct: 230 CGGEHTAALAKGGTVFTFGSGGFGQL 255
Score = 193 (73.0 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 66/208 (31%), Positives = 92/208 (44%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + V I+ G +H L+ G+VF WG S GQLG + TD P + +
Sbjct: 162 PRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDT-TD-RFVPTVVNS 219
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V IS GG H+AA + G ++ +G GQ+G D + HP +E + S
Sbjct: 220 LKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKD----EHHPRLVAELWGS 275
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCGWNEYNQLSMGCGVSQVSVMTRLSVP-EHV 195
KV V CG HTL L +GCG QL G V Q SV + P E+
Sbjct: 276 ---KVSQVTCGRNHTLVSTASPKLIYSFGCGMQ--GQLGNGEQVKQ-SVPLPVDQPTEYN 329
Query: 196 KNCPIVKLFAEHWNSARLSVPEHAKDSS 223
I KL A +S L E +++
Sbjct: 330 DEYTIQKLVAGENHSFALYFKELGNEAN 357
Score = 124 (48.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 33/109 (30%), Positives = 48/109 (44%)
Query: 69 DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
D + E ++ L V+QI+ G HS A T DG L+ WG N GQ+G+ K P
Sbjct: 104 DKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLR-KEQAGTQSP 162
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ I V ++ G H+ L ++G G N QL +G
Sbjct: 163 RHLQ-----SLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLG 206
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 233 (87.1 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 67/182 (36%), Positives = 94/182 (51%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ + S D PR
Sbjct: 3951 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD---RPRV 4007
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L G VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4008 IESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVE---- 4061
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVSVMTRL 189
Q +VVDVACGS TL L DD+++W G +Y +L S GC V ++ +T L
Sbjct: 4062 -ALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 4120
Query: 190 SV 191
V
Sbjct: 4121 GV 4122
Score = 215 (80.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 60/194 (30%), Positives = 93/194 (47%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 4110 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 4167
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H ++DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4168 GLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVA-----A 4220
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGW------NEYNQLSMGCGVSQVSVMTRLSVP 192
Q KV VACGS HTLA G EYN L + +++ RL +
Sbjct: 4221 LQGKKVNRVACGSAHTLAWSTSKPA-SAGKLPVQVPMEYNHLQE---IPIIALRNRLLLL 4276
Query: 193 EHVKN--CPIVKLF 204
H+ CP + +F
Sbjct: 4277 HHISELFCPCIPMF 4290
Score = 208 (78.3 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 56/147 (38%), Positives = 79/147 (53%)
Query: 29 LVVTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ I L L VV
Sbjct: 514 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVV 571
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y+WG + ++G G + H +P E Q KV+D
Sbjct: 572 KVRCGSQFSVALTKDGQVYSWGKGDNQRLG-HGTEE---HVRYP-KLLEGL--QGKKVID 624
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 625 VAAGSTHCLALTEDSEVHSWGSNDQCQ 651
Score = 201 (75.8 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 59/155 (38%), Positives = 80/155 (51%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG--LG-- 84
+ IA D H LAL G V+SWG G G+LG+ T EP+ I A SG G
Sbjct: 406 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKH 463
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV I+ G +SAA T +G LY WG N G++G D + PM + + +KV
Sbjct: 464 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKV 516
Query: 145 VDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+DVACGS TLA+ ++ +W G +Y +L G
Sbjct: 517 IDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 551
Score = 201 (75.8 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 57/156 (36%), Positives = 83/156 (53%)
Query: 31 VTDIACGF-D-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG D LALT EG+VFSWG+G G+LG G++ P+ I L+G GV QI
Sbjct: 3074 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQI 3131
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D+ V P + E + K+V VA
Sbjct: 3132 ECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVV---EGLRGK--KIVHVA 3184
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3185 VGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 3218
Score = 196 (74.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 52/149 (34%), Positives = 76/149 (51%)
Query: 31 VTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4068 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4125
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D V P + Q KV+ +A
Sbjct: 4126 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGSDDHV-RRPRQVQ-----GLQGKKVIAIA 4178
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4179 TGSLHCVCCSEDGEVYTWGDNDEGQLGDG 4207
Score = 191 (72.3 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 56/168 (33%), Positives = 87/168 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPREI 77
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR+I
Sbjct: 2903 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQI 2960
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
ALS V V + +GG H+ A T DG +++WG + G++G +++ P + E
Sbjct: 2961 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC--DKPRLI---E 3015
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3016 ALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3061
Score = 189 (71.6 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 46/152 (30%), Positives = 79/152 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H ALT G +++WG G G+LG+ + T ++P+ ++ L G V+Q++
Sbjct: 3022 IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ--LKPKMVKVLLGHRVIQVAC 3079
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T +G +++WG + G++G G + P + E + Q V +
Sbjct: 3080 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERLNGQG--VCQIE 3132
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
CG++ +LAL +W G +Y +L G V
Sbjct: 3133 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3164
Score = 186 (70.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 63/191 (32%), Positives = 90/191 (47%)
Query: 2 CDHLASGPLKM--LSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGS 57
C +G L + S +P ++ VV +A G H ALT +G VFSWG G
Sbjct: 2937 CGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 2996
Query: 58 RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
G+LG+ S + + +PR I AL + I+ G HSAA T G LY WG G++G
Sbjct: 2997 DGKLGH-FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG- 3053
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL- 174
G + P + +V+ VACGSR TLAL D+ ++ G ++ +L
Sbjct: 3054 HGD-NTTQLKPKMVKVLLGH-----RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3107
Query: 175 ---SMGCGVSQ 182
S GC + Q
Sbjct: 3108 RGGSEGCNIPQ 3118
Score = 185 (70.2 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 48/144 (33%), Positives = 76/144 (52%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
S+ ++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++
Sbjct: 3111 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVR 3167
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P+ + L G +V ++ G H A T G +YAWG N+ GQ G G V P +
Sbjct: 3168 KPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG-NGTTT-VNRKP---T 3222
Query: 133 WSEDFDSQNIKVVDVACGSRHTLA 156
+ + Q K+ VACGS H++A
Sbjct: 3223 LVQGLEGQ--KITRVACGSSHSVA 3244
Score = 181 (68.8 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 49/144 (34%), Positives = 78/144 (54%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 464 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 521
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T++G +++WG + G++G G D P + +D D VV V
Sbjct: 522 GSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSD-GCKTPKLIEKLQDLD-----VVKVR 574
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 575 CGSQFSVALTKDGQVYSWGKGDNQ 598
Score = 177 (67.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 49/150 (32%), Positives = 76/150 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 559 PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 615
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P S
Sbjct: 616 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEP-SALPGL 669
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
D+++I V +ACG + A S W G
Sbjct: 670 DTKHI--VGIACGPAQSFAW-SSCSEWSIG 696
Score = 152 (58.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 55/173 (31%), Positives = 76/173 (43%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
D L+ G ++ WG+ RGQLG G + P AL+ L VQ+ G A
Sbjct: 3866 DWTLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALAALRPVQLIGGEQTLFAV 3923
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG LYA G+ GG++GV G V P + E IK V V G +H LAL
Sbjct: 3924 TADGKLYATGYGAGGRLGVGGTES--VSTPTLL---ESIQHVFIKKVAVNSGGKHCLALS 3978
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
+ ++ W E +G G S R V E ++ +V + A +SA
Sbjct: 3979 SEGEVYS--WGEAEDGKLGHG--NRSPCDRPRVIESLRGTEVVDVAAGGAHSA 4027
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 45/161 (27%), Positives = 76/161 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ Y S + P+ ++
Sbjct: 353 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQA--------YNSD----TLAPQLVQG 400
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSED 136
L+ +V+I+A G H A G +Y+WG +GG++G G D V + +P +S
Sbjct: 401 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG-HG--DTVPLEEPKVISAFSG 457
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 458 KQAGK-HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 497
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 233 (87.1 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 67/182 (36%), Positives = 94/182 (51%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ + S D PR
Sbjct: 4041 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD---RPRV 4097
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L G VV ++AGG HSA T G LY WG G++G D + P +
Sbjct: 4098 IESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVE---- 4151
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVSVMTRL 189
Q +VVDVACGS TL L DD+++W G +Y +L S GC V ++ +T L
Sbjct: 4152 -ALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 4210
Query: 190 SV 191
V
Sbjct: 4211 GV 4212
Score = 215 (80.7 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 60/194 (30%), Positives = 93/194 (47%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 4200 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 4257
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H ++DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4258 GLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVA-----A 4310
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGW------NEYNQLSMGCGVSQVSVMTRLSVP 192
Q KV VACGS HTLA G EYN L + +++ RL +
Sbjct: 4311 LQGKKVNRVACGSAHTLAWSTSKPA-SAGKLPVQVPMEYNHLQE---IPIIALRNRLLLL 4366
Query: 193 EHVKN--CPIVKLF 204
H+ CP + +F
Sbjct: 4367 HHISELFCPCIPMF 4380
Score = 208 (78.3 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 56/147 (38%), Positives = 79/147 (53%)
Query: 29 LVVTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ I L L VV
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVV 661
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y+WG + ++G G + H +P E Q KV+D
Sbjct: 662 KVRCGSQFSVALTKDGQVYSWGKGDNQRLG-HGTEE---HVRYP-KLLEGL--QGKKVID 714
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 715 VAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 201 (75.8 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 59/155 (38%), Positives = 80/155 (51%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG--LG-- 84
+ IA D H LAL G V+SWG G G+LG+ T EP+ I A SG G
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGH--GDTVPLEEPKVISAFSGKQAGKH 553
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV I+ G +SAA T +G LY WG N G++G D + PM + + +KV
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI----PMLVA---GLKGLKV 606
Query: 145 VDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+DVACGS TLA+ ++ +W G +Y +L G
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 201 (75.8 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 57/156 (36%), Positives = 83/156 (53%)
Query: 31 VTDIACGF-D-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG D LALT EG+VFSWG+G G+LG G++ P+ I L+G GV QI
Sbjct: 3164 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQI 3221
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D+ V P + E + K+V VA
Sbjct: 3222 ECGAQFSLALTKSGVVWTWGKGDYFRLG-HGS-DVHVRKPQVV---EGLRGK--KIVHVA 3274
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3275 VGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVN 3308
Score = 196 (74.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 52/149 (34%), Positives = 76/149 (51%)
Query: 31 VTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4158 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4215
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D V P + Q KV+ +A
Sbjct: 4216 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGSDDHV-RRPRQVQ-----GLQGKKVIAIA 4268
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4269 TGSLHCVCCSEDGEVYTWGDNDEGQLGDG 4297
Score = 191 (72.3 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 56/168 (33%), Positives = 87/168 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPREI 77
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR+I
Sbjct: 2993 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQI 3050
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
ALS V V + +GG H+ A T DG +++WG + G++G +++ P + E
Sbjct: 3051 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC--DKPRLI---E 3105
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++ I+ D+ACGS H+ AL L+ G EY +L G +Q+
Sbjct: 3106 ALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3151
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 46/152 (30%), Positives = 79/152 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H ALT G +++WG G G+LG+ + T ++P+ ++ L G V+Q++
Sbjct: 3112 IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ--LKPKMVKVLLGHRVIQVAC 3169
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T +G +++WG + G++G G + P + E + Q V +
Sbjct: 3170 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERLNGQG--VCQIE 3222
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
CG++ +LAL +W G +Y +L G V
Sbjct: 3223 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3254
Score = 186 (70.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 63/191 (32%), Positives = 90/191 (47%)
Query: 2 CDHLASGPLKM--LSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGS 57
C +G L + S +P ++ VV +A G H ALT +G VFSWG G
Sbjct: 3027 CGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3086
Query: 58 RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
G+LG+ S + + +PR I AL + I+ G HSAA T G LY WG G++G
Sbjct: 3087 DGKLGH-FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG- 3143
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL- 174
G + P + +V+ VACGSR TLAL D+ ++ G ++ +L
Sbjct: 3144 HGD-NTTQLKPKMVKVLLGH-----RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3197
Query: 175 ---SMGCGVSQ 182
S GC + Q
Sbjct: 3198 RGGSEGCNIPQ 3208
Score = 185 (70.2 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 48/144 (33%), Positives = 76/144 (52%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
S+ ++P ++ V I CG LALT+ G+V++WG G +LG+ G+D ++
Sbjct: 3201 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GSDVHVR 3257
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P+ + L G +V ++ G H A T G +YAWG N+ GQ G G V P +
Sbjct: 3258 KPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG-NGTTT-VNRKP---T 3312
Query: 133 WSEDFDSQNIKVVDVACGSRHTLA 156
+ + Q K+ VACGS H++A
Sbjct: 3313 LVQGLEGQ--KITRVACGSSHSVA 3334
Score = 181 (68.8 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 49/144 (34%), Positives = 78/144 (54%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG + A+T EG +++WG G+ G+LG+ SS +A P + L GL V+ ++
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVAC 611
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T++G +++WG + G++G G D P + +D D VV V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSD-GCKTPKLIEKLQDLD-----VVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQ 688
Score = 177 (67.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 49/150 (32%), Positives = 76/150 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL V + CG +ALT++G V+SWG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L V P P S
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRVTKPEP-SALPGL 759
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
D+++I V +ACG + A S W G
Sbjct: 760 DTKHI--VGIACGPAQSFAW-SSCSEWSIG 786
Score = 152 (58.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 55/173 (31%), Positives = 76/173 (43%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
D L+ G ++ WG+ RGQLG G + P AL+ L VQ+ G A
Sbjct: 3956 DWTLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALAALRPVQLIGGEQTLFAV 4013
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG LYA G+ GG++GV G V P + E IK V V G +H LAL
Sbjct: 4014 TADGKLYATGYGAGGRLGVGGTES--VSTPTLL---ESIQHVFIKKVAVNSGGKHCLALS 4068
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
+ ++ W E +G G S R V E ++ +V + A +SA
Sbjct: 4069 SEGEVYS--WGEAEDGKLGHG--NRSPCDRPRVIESLRGTEVVDVAAGGAHSA 4117
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 45/161 (27%), Positives = 76/161 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L VT IAC L L++ G V++ Y S + P+ ++
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQA--------YNSD----TLAPQLVQG 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSED 136
L+ +V+I+A G H A G +Y+WG +GG++G G D V + +P +S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG-HG--DTVPLEEPKVISAFSG 547
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VV +ACGS ++ A+ + L+ G Y +L G
Sbjct: 548 KQAGK-HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 225 (84.3 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 52/158 (32%), Positives = 80/158 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D FL+ + D+ CG H + + +G V++ G GQLG+ A P + A
Sbjct: 25 PRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEK----ARKRPEHVGA 80
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L +V +S G H+ A G +YAWG GQ+G+ G + + + S SE
Sbjct: 81 LDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSE---- 136
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I++V VACG H+LAL + ++ G N+Y QL +G
Sbjct: 137 --IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Score = 221 (82.9 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 54/160 (33%), Positives = 79/160 (49%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+ +P + ++ + +ACG+ H LAL++ VFSWG GQLG N P
Sbjct: 123 ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQN-SP 181
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
I++L G+ QI+AGG HS T G ++ WG N GQ+G+ D V P +
Sbjct: 182 HVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLL--- 236
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ +Q KVV + CG HT AL + ++ G Y QL
Sbjct: 237 KSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Score = 208 (78.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 54/170 (31%), Positives = 90/170 (52%)
Query: 13 LSQVFHMPSRM--DHF--LDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
L Q+ H +R +H LD + ++CG H LAL +G V++WG + GQLG P G
Sbjct: 63 LGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP--G 120
Query: 68 TDANME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH 126
T+ + PR I++LS + +VQ++ G +HS A ++ +++WG N GQ+G+ G +
Sbjct: 121 TEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL-GYEYKKQN 179
Query: 127 DPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
PH + I +A G H+ L +++G G N++ QL +
Sbjct: 180 SPHVIK-----SLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 162 (62.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/100 (38%), Positives = 56/100 (56%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P+ + V I CG DH ALT+EG VF++G G GQLG+ S+ + N PR++
Sbjct: 231 YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKV 288
Query: 78 RALSGLGVVQISAGGWHSAART-QDGFLYAWGWNNGGQVG 116
L G V QI+ G H+ A G +Y++G GQ+G
Sbjct: 289 FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 47/169 (27%), Positives = 73/169 (43%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + L + IA G H LT G +F WG GQLG + D + P +++
Sbjct: 181 PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL-NDDNDRYV-PTLLKS 238
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VV I G H+AA T++G ++ +G GQ+G H+ +P + F+
Sbjct: 239 LRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS----TSHEINPR---KVFEL 291
Query: 140 QNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVSVMT 187
V + CG +HT A + ++ G QL G ++ S T
Sbjct: 292 MGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFT 340
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 49/165 (29%), Positives = 73/165 (44%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WGN S GQLG + +EPR+ + + G H+ DG +Y G N+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+G E H D+QNI V V+CG HTLAL D ++ G
Sbjct: 64 GQLGHEKARKRPEH-------VGALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 173 QLSMGCGVSQVSVMTRLSVPEHVKNCP---IVKLFAEHWNSARLS 214
QL + G + + VP ++K+ IV++ +++S LS
Sbjct: 115 QLGLP-GTEEC-----IRVPRNIKSLSEIQIVQVACGYYHSLALS 153
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 232 (86.7 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 66/182 (36%), Positives = 95/182 (52%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ + S D PR
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD---RPRV 4089
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L G+ VV I+AGG HSA T G L+ WG G++G G + D E
Sbjct: 4090 IESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG-HGDSE----DQLKPKLVEA 4144
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVSVMTRL 189
Q +V+D+ACGS TL L DD+++W G +Y +L S GC V ++ +T L
Sbjct: 4145 L--QGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDL 4202
Query: 190 SV 191
V
Sbjct: 4203 GV 4204
Score = 220 (82.5 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 62/196 (31%), Positives = 94/196 (47%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D DL V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 4192 VPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 4249
Query: 79 ALSGLGVVQISAGGWHSAARTQDGF--LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4250 GLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVA---- 4303
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGW------NEYNQLSMGCGVSQVSVMTRLS 190
Q K+ VACGS HTLA G EYN L + +S+ RL
Sbjct: 4304 -ALQGKKINRVACGSAHTLAWSTSKPA-NAGKLPTQVPMEYNHLQE---IPIISLRNRLL 4358
Query: 191 VPEHVKN--CPIVKLF 204
+ H+ CP + +F
Sbjct: 4359 LLHHISELFCPCIPMF 4374
Score = 207 (77.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 60/155 (38%), Positives = 82/155 (52%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG--LG-- 84
+ IA D H LAL+ G VFSWG G G+LG+ T EP+ I ALSG G
Sbjct: 496 IVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGH--GDTVPLEEPKLISALSGKQAGKH 553
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV I+ G +SAA T +G LY WG N G++G D + PM + + +KV
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI----PMLVT---GLKGLKV 606
Query: 145 VDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+DV+CGS TLA+ ++ +W G +Y +L G
Sbjct: 607 IDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 201 (75.8 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 57/156 (36%), Positives = 83/156 (53%)
Query: 31 VTDIACGF-D-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG D LALT EG+VFSWG+G G+LG G++ P+ I L+G GV QI
Sbjct: 3157 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQI 3214
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D+ V P + E + K+V VA
Sbjct: 3215 ECGAQFSLALTKSGVVWTWGKGDYFRLG-HGT-DVHVRKPQVV---EGLRGK--KIVHVA 3267
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3268 VGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVN 3301
Score = 200 (75.5 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 53/147 (36%), Positives = 78/147 (53%)
Query: 29 LVVTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D++CG LA+T+ G V+SWG+G G+LG G+D P+ I L L +V
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDIV 661
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y WG + ++G G + H +P E + KV+D
Sbjct: 662 KVRCGSQFSIALTKDGQVYTWGKGDNQRLG-HGTEE---HVRYP-KLLEGLKGK--KVID 714
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 715 VAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 190 (71.9 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 49/144 (34%), Positives = 76/144 (52%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
S+ ++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++
Sbjct: 3194 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVR 3250
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P+ + L G +V ++ G H A T G +YAWG N+ GQ G G V P +
Sbjct: 3251 KPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG-NGTTT-VNRKP---T 3305
Query: 133 WSEDFDSQNIKVVDVACGSRHTLA 156
+ + Q K+ VACGS H++A
Sbjct: 3306 LVQGLEGQ--KITRVACGSSHSVA 3327
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 55/168 (32%), Positives = 87/168 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPREI 77
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR+I
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQI 3043
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
ALS V V + +GG H+ A T DG +++WG + G++G +++ P + E
Sbjct: 3044 TALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNC--DKPRLI---E 3098
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3099 ALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQL 3144
Score = 188 (71.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 62/191 (32%), Positives = 92/191 (48%)
Query: 2 CDHLASGPLKM--LSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGS 57
C +G L + S +P ++ + VV +A G H +ALT +G +FSWG G
Sbjct: 3020 CGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGD 3079
Query: 58 RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
G+LG+ S + + +PR I AL + I+ G HSAA T G LY WG G++G
Sbjct: 3080 DGKLGH-FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG- 3136
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL- 174
G + P + +V+ VACGSR TLAL D+ ++ G ++ +L
Sbjct: 3137 HGD-NTTQLKPKMVKVLLGH-----RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3190
Query: 175 ---SMGCGVSQ 182
S GC + Q
Sbjct: 3191 RGGSEGCNIPQ 3201
Score = 187 (70.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 45/152 (29%), Positives = 79/152 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H A+T G +++WG G G+LG+ + T ++P+ ++ L G V+Q++
Sbjct: 3105 IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ--LKPKMVKVLLGHRVIQVAC 3162
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T +G +++WG + G++G G + P + E + Q V +
Sbjct: 3163 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERLNGQG--VCQIE 3215
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
CG++ +LAL +W G +Y +L G V
Sbjct: 3216 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3247
Score = 182 (69.1 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 49/144 (34%), Positives = 78/144 (54%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG + A+T EG +++WG G+ G+LG+ SS D + P + L GL V+ +S
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS-EDQTI-PMLVTGLKGLKVIDVSC 611
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T++G +++WG + G++G G D P + +D D +V V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSD-GCKTPKLIEKLQDLD-----IVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYTWGKGDNQ 688
Score = 180 (68.4 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 58/191 (30%), Positives = 86/191 (45%)
Query: 31 VTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+ LGVV++
Sbjct: 4150 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTDLGVVKV 4207
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D V P + Q KV+ +A
Sbjct: 4208 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGSDDHV-RRPRQVQ-----GLQGKKVIAIA 4260
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
GS H + +D W + ++ +G G + RL K V + H
Sbjct: 4261 TGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4320
Query: 209 NSARLSVPEHA 219
+ S P +A
Sbjct: 4321 LAWSTSKPANA 4331
Score = 172 (65.6 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 45/150 (30%), Positives = 76/150 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL + + CG +ALT++G V++WG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L + P P +
Sbjct: 706 GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRITKPEPAALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
D+++I V +ACG + A S W G
Sbjct: 760 DTKHI--VGIACGPAQSFAW-SSCSEWSIG 786
Score = 150 (57.9 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 54/173 (31%), Positives = 76/173 (43%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
D L+ G ++ WG+ RGQLG G + P AL+ L VQ+ G A
Sbjct: 3948 DWTLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAV 4005
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG LYA G+ GG++G+ G V P + E IK V V G +H LAL
Sbjct: 4006 TADGKLYATGYGAGGRLGIGGTES--VSTPTLL---ESIQHVFIKKVAVNSGGKHCLALS 4060
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
+ ++ W E +G G S R V E ++ +V + A +SA
Sbjct: 4061 SEGEVYS--WGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDIAAGGAHSA 4109
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 41/168 (24%), Positives = 77/168 (45%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + L + G A+T +G +++ G G+ G+LG GT++ P +
Sbjct: 3980 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGI--GGTESVSTPTLLE 4037
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + V +++GG H A + +G +Y+WG G++G G P
Sbjct: 4038 SIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRS-------PCDRPRV 4089
Query: 137 FDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+S + I+VVD+A G H+ + L+ G Y +L G Q+
Sbjct: 4090 IESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL 4137
Score = 125 (49.1 bits), Expect = 0.00042, P = 0.00042
Identities = 46/170 (27%), Positives = 80/170 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L V IAC L L++ G V++ S LG P+ +++
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNS-DTLG-----------PQLVQS 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSED 136
L+ +V+I+A G H A + +G +++WG +GG++G G D V + +P +S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLG-HG--DTVPLEEPKLISALSG 547
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
+ VV +ACGS ++ A+ + L+ G Y +L G Q M
Sbjct: 548 KQAGK-HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 232 (86.7 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 66/182 (36%), Positives = 95/182 (52%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ EG V+SWG G+LG+ + S D PR
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD---RPRV 4089
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L G+ VV I+AGG HSA T G L+ WG G++G G + D E
Sbjct: 4090 IESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG-HGDSE----DQLKPKLVEA 4144
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVSVMTRL 189
Q +V+D+ACGS TL L DD+++W G +Y +L S GC V ++ +T L
Sbjct: 4145 L--QGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDL 4202
Query: 190 SV 191
V
Sbjct: 4203 GV 4204
Score = 220 (82.5 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 62/196 (31%), Positives = 94/196 (47%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D DL V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 4192 VPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 4249
Query: 79 ALSGLGVVQISAGGWHSAARTQDGF--LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4250 GLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVA---- 4303
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGW------NEYNQLSMGCGVSQVSVMTRLS 190
Q K+ VACGS HTLA G EYN L + +S+ RL
Sbjct: 4304 -ALQGKKINRVACGSAHTLAWSTSKPA-NAGKLPTQVPMEYNHLQE---IPIISLRNRLL 4358
Query: 191 VPEHVKN--CPIVKLF 204
+ H+ CP + +F
Sbjct: 4359 LLHHISELFCPCIPMF 4374
Score = 207 (77.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 60/155 (38%), Positives = 82/155 (52%)
Query: 31 VTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG--LG-- 84
+ IA D H LAL+ G VFSWG G G+LG+ T EP+ I ALSG G
Sbjct: 496 IVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGH--GDTVPLEEPKLISALSGKQAGKH 553
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV I+ G +SAA T +G LY WG N G++G D + PM + + +KV
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI----PMLVT---GLKGLKV 606
Query: 145 VDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
+DV+CGS TLA+ ++ +W G +Y +L G
Sbjct: 607 IDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 201 (75.8 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 57/156 (36%), Positives = 83/156 (53%)
Query: 31 VTDIACGF-D-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG D LALT EG+VFSWG+G G+LG G++ P+ I L+G GV QI
Sbjct: 3157 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQI 3214
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D+ V P + E + K+V VA
Sbjct: 3215 ECGAQFSLALTKSGVVWTWGKGDYFRLG-HGT-DVHVRKPQVV---EGLRGK--KIVHVA 3267
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G+ H LA+ D ++ G N++ Q G G + V+
Sbjct: 3268 VGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVN 3301
Score = 200 (75.5 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 53/147 (36%), Positives = 78/147 (53%)
Query: 29 LVVTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D++CG LA+T+ G V+SWG+G G+LG G+D P+ I L L +V
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDIV 661
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G S A T+DG +Y WG + ++G G + H +P E + KV+D
Sbjct: 662 KVRCGSQFSIALTKDGQVYTWGKGDNQRLG-HGTEE---HVRYP-KLLEGLKGK--KVID 714
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQ 173
VA GS H LAL +D+ + G N+ Q
Sbjct: 715 VAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 190 (71.9 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 49/144 (34%), Positives = 76/144 (52%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
S+ ++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++
Sbjct: 3194 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVR 3250
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P+ + L G +V ++ G H A T G +YAWG N+ GQ G G V P +
Sbjct: 3251 KPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG-NGTTT-VNRKP---T 3305
Query: 133 WSEDFDSQNIKVVDVACGSRHTLA 156
+ + Q K+ VACGS H++A
Sbjct: 3306 LVQGLEGQ--KITRVACGSSHSVA 3327
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 55/168 (32%), Positives = 87/168 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPREI 77
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR+I
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQI 3043
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
ALS V V + +GG H+ A T DG +++WG + G++G +++ P + E
Sbjct: 3044 TALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNC--DKPRLI---E 3098
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3099 ALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQL 3144
Score = 188 (71.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 62/191 (32%), Positives = 92/191 (48%)
Query: 2 CDHLASGPLKM--LSQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGS 57
C +G L + S +P ++ + VV +A G H +ALT +G +FSWG G
Sbjct: 3020 CGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGD 3079
Query: 58 RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
G+LG+ S + + +PR I AL + I+ G HSAA T G LY WG G++G
Sbjct: 3080 DGKLGH-FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG- 3136
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL- 174
G + P + +V+ VACGSR TLAL D+ ++ G ++ +L
Sbjct: 3137 HGD-NTTQLKPKMVKVLLGH-----RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3190
Query: 175 ---SMGCGVSQ 182
S GC + Q
Sbjct: 3191 RGGSEGCNIPQ 3201
Score = 187 (70.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 45/152 (29%), Positives = 79/152 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H A+T G +++WG G G+LG+ + T ++P+ ++ L G V+Q++
Sbjct: 3105 IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ--LKPKMVKVLLGHRVIQVAC 3162
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T +G +++WG + G++G G + P + E + Q V +
Sbjct: 3163 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERLNGQG--VCQIE 3215
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
CG++ +LAL +W G +Y +L G V
Sbjct: 3216 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3247
Score = 182 (69.1 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 49/144 (34%), Positives = 78/144 (54%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG + A+T EG +++WG G+ G+LG+ SS D + P + L GL V+ +S
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS-EDQTI-PMLVTGLKGLKVIDVSC 611
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T++G +++WG + G++G G D P + +D D +V V
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSD-GCKTPKLIEKLQDLD-----IVKVR 664
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 665 CGSQFSIALTKDGQVYTWGKGDNQ 688
Score = 180 (68.4 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 58/191 (30%), Positives = 86/191 (45%)
Query: 31 VTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V DIACG L LT + V+SWG+G G+LG G+D P +I +L+ LGVV++
Sbjct: 4150 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTDLGVVKV 4207
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D V P + Q KV+ +A
Sbjct: 4208 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGSDDHV-RRPRQVQ-----GLQGKKVIAIA 4260
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
GS H + +D W + ++ +G G + RL K V + H
Sbjct: 4261 TGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4320
Query: 209 NSARLSVPEHA 219
+ S P +A
Sbjct: 4321 LAWSTSKPANA 4331
Score = 172 (65.6 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 45/150 (30%), Positives = 76/150 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL + + CG +ALT++G V++WG G +LG+ GT+ ++ P+ +
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH---GTEEHVRYPKLLE 705
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD-LVVHDPHPMSWSEDF 137
L G V+ ++AG H A T+D +++WG N+ Q D L + P P +
Sbjct: 706 GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-----HFDTLRITKPEPAALP-GL 759
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
D+++I V +ACG + A S W G
Sbjct: 760 DTKHI--VGIACGPAQSFAW-SSCSEWSIG 786
Score = 150 (57.9 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 54/173 (31%), Positives = 76/173 (43%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
D L+ G ++ WG+ RGQLG G + P AL+ L VQ+ G A
Sbjct: 3948 DWTLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAV 4005
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG LYA G+ GG++G+ G V P + E IK V V G +H LAL
Sbjct: 4006 TADGKLYATGYGAGGRLGIGGTES--VSTPTLL---ESIQHVFIKKVAVNSGGKHCLALS 4060
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
+ ++ W E +G G S R V E ++ +V + A +SA
Sbjct: 4061 SEGEVYS--WGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDIAAGGAHSA 4109
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 41/168 (24%), Positives = 77/168 (45%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + L + G A+T +G +++ G G+ G+LG GT++ P +
Sbjct: 3980 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGI--GGTESVSTPTLLE 4037
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + V +++GG H A + +G +Y+WG G++G G P
Sbjct: 4038 SIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRS-------PCDRPRV 4089
Query: 137 FDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+S + I+VVD+A G H+ + L+ G Y +L G Q+
Sbjct: 4090 IESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL 4137
Score = 125 (49.1 bits), Expect = 0.00042, P = 0.00042
Identities = 46/170 (27%), Positives = 80/170 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + +L V IAC L L++ G V++ S LG P+ +++
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNS-DTLG-----------PQLVQS 490
Query: 80 LSGLGVVQISA--GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSED 136
L+ +V+I+A G H A + +G +++WG +GG++G G D V + +P +S
Sbjct: 491 LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLG-HG--DTVPLEEPKLISALSG 547
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVM 186
+ VV +ACGS ++ A+ + L+ G Y +L G Q M
Sbjct: 548 KQAGK-HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 224 (83.9 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 55/157 (35%), Positives = 78/157 (49%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + D V+ I CG H LAL+ G V SWG+ GQLG+ + + P+ +R
Sbjct: 81 PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQL-PKVVRQ 139
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L VVQI+ G HS A T G LY+WG N GQ+GV DL H +P+ +
Sbjct: 140 LVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLT-HCNYPLRLTTLL-- 196
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I + +ACG H+ + +++G G N QL +
Sbjct: 197 -GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 232
Score = 209 (78.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 54/177 (30%), Positives = 88/177 (49%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANM 72
++ +P + + V IACG +H LALT G ++SWG+ GQLG P+ T N
Sbjct: 129 EIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNY 188
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P + L G+ + I+ GG HS ++ G ++ WG NN GQ+G+ + + +P
Sbjct: 189 -PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE----TNRSYPTQ 243
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
+ + V VACG ++ L ++ ++ CG Y QL G G S ++ R+
Sbjct: 244 LKT---LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL--GHGFSSNEMLPRM 295
Score = 173 (66.0 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 54/173 (31%), Positives = 81/173 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS++ D V +ACG H L LT G V++ G+ QLG+ P I
Sbjct: 31 PSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLP----TKRPLLIPE 86
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L ++QI G HS A + G + +WG N+ GQ+G + +V P + +
Sbjct: 87 LQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKE-IVQLPKVV---RQLVT 142
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
+ VV +ACG+ H+LAL L+ G N Y QL GV+ + +T + P
Sbjct: 143 KT--VVQIACGNNHSLALTSCGELYSWGSNIYGQL----GVNSPNDLTHCNYP 189
Score = 159 (61.0 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 48/156 (30%), Positives = 74/156 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L + + IACG +H +++ G VF WG + GQLG + T+ + P +++
Sbjct: 189 PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL-NDETNRSY-PTQLKT 246
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L LGV ++ G S T +G ++ G GQ+G G ++ P E S
Sbjct: 247 LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG-HG---FSSNEMLPRMVMELMGS 302
Query: 140 QNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQL 174
+ VACG+RHTLAL ++ G QL
Sbjct: 303 T---ITQVACGNRHTLALVPSRGRVYAFGLGSSGQL 335
Score = 147 (56.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/107 (33%), Positives = 57/107 (53%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ L V +ACG + + LT EG VF+ G G+ GQLG+ S + M PR +
Sbjct: 241 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE--MLPRMVME 298
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVV 125
L G + Q++ G H+ A G +YA+G + GQ+G L++
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLML 345
Score = 133 (51.9 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 38/125 (30%), Positives = 59/125 (47%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
++ WG+ S GQLG + + P +I V Q++ G H+ T G +YA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
N+ Q+G DL P + +D+ ++ + CGSRH+LAL D + G N
Sbjct: 67 NDYSQLGH----DLPTKRPLLIPELQDY-----VIIQICCGSRHSLALSDWGQVLSWGDN 117
Query: 170 EYNQL 174
+ QL
Sbjct: 118 DCGQL 122
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 231 (86.4 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 67/182 (36%), Positives = 94/182 (51%)
Query: 20 PSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPRE 76
P+ ++ + + +A G HCLAL+ EG ++SWG G+LG+ + S D PR
Sbjct: 4026 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCD---RPRV 4082
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
I +L G+ VV I+AGG HSA T G LY WG G++G G + D E
Sbjct: 4083 IESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLG-HGDSE----DQLKPKLVEA 4137
Query: 137 FDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQL----SMGCGVS-QVSVMTRL 189
Q +V+DVACGS TL L DD+ +W G +Y +L S GC V ++ +T L
Sbjct: 4138 L--QGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 4195
Query: 190 SV 191
V
Sbjct: 4196 GV 4197
Score = 219 (82.2 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 60/194 (30%), Positives = 93/194 (47%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++D L V + CG +ALT+ G V++WG G +LG+ S D PR+++
Sbjct: 4185 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD--DHVRRPRQVQ 4242
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ I+ G H T+DG +Y WG N+ GQ+G +G + + P ++
Sbjct: 4243 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTN-AIQRPRLVA-----A 4295
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGW------NEYNQLSMGCGVSQVSVMTRLSVP 192
Q K+ VACGS HTLA G EYN L ++ + + RL +
Sbjct: 4296 LQGKKINRVACGSAHTLAWSTSKPT-NAGKLPAQVPMEYNHLQE---IAIIGLRNRLLLL 4351
Query: 193 EHVKN--CPIVKLF 204
H+ CP + +F
Sbjct: 4352 HHISELFCPCIPMF 4365
Score = 201 (75.8 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 52/145 (35%), Positives = 78/145 (53%)
Query: 29 LVVTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L V D+ACG LA+T+ G V+SWG+G G+LG G+D P+ + L L +V
Sbjct: 593 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG--RGGSDGCKTPKLVEKLQDLDIV 650
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS-QNIKVV 145
++ G S A T+DG +Y WG + ++G G D H + + + DS Q +VV
Sbjct: 651 KVCCGSQFSVALTKDGQVYTWGKGDNQRLG-HGT------DEH-VRYPKLLDSLQGKRVV 702
Query: 146 DVACGSRHTLALCDDNSLWGCGWNE 170
D+A GS H LAL ++ + G N+
Sbjct: 703 DIAVGSTHCLALTEEGEVHSWGSND 727
Score = 200 (75.5 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 61/167 (36%), Positives = 84/167 (50%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG--LG--VVQISAGGWHS 95
H LAL+ G VFSWG G G+LG+ T EP I SG +G VV I+ G +S
Sbjct: 496 HYLALSVNGEVFSWGCGDGGRLGH--GDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYS 553
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS--RH 153
AA T DG L+ WG N G++G D PM + + +KV+DVACGS
Sbjct: 554 AAITADGELHTWGRGNYGRLGHGSSEDQTT----PMLVTA---LKGLKVIDVACGSGDAQ 606
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGC--GVSQVSVMTRLSVPEHVKNC 198
TLA+ ++ +W G +Y +L G G ++ +L + VK C
Sbjct: 607 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVC 653
Score = 197 (74.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 52/149 (34%), Positives = 77/149 (51%)
Query: 31 VTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V D+ACG L LT + +V+SWG+G G+LG G+D P +I +L+GLGVV++
Sbjct: 4143 VIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKV 4200
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G +Y WG + ++G G D V P + Q KV+ +A
Sbjct: 4201 ECGSQFSVALTKSGAVYTWGKGDYHRLG-HGSDDHV-RRPRQVQ-----GLQGKKVIAIA 4253
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
GS H + +D ++ G N+ QL G
Sbjct: 4254 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4282
Score = 196 (74.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 56/156 (35%), Positives = 83/156 (53%)
Query: 31 VTDIACGF-D-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG D LALT EG+VFSWG+G G+LG G++ P+ I L+G GV QI
Sbjct: 3149 VVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQI 3206
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D+ V P + E + K+V VA
Sbjct: 3207 ECGAQFSLALTKSGVVWTWGKGDYFRLG-HGT-DVHVRKPQMV---EGLRGK--KIVHVA 3259
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
G+ H LA+ + ++ G N++ Q G G + V+
Sbjct: 3260 VGALHCLAVTETGQVFAWGDNDHGQ--QGNGTTTVN 3293
Score = 194 (73.4 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 65/191 (34%), Positives = 94/191 (49%)
Query: 2 CDHLASGPLKM-LSQ-VFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGS 57
C +G L + LS +P ++ + VV +A G H +ALT +G VFSWG G
Sbjct: 3012 CGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 3071
Query: 58 RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
G+LG+ S + + +PR I AL + I+ G HSAA T G LY+WG G++G
Sbjct: 3072 DGKLGH-FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLG- 3128
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQL- 174
G + P + +VV VACGSR TLAL D+ ++ G ++ +L
Sbjct: 3129 HGDNTTQLR-PKLVKVLLGH-----RVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLG 3182
Query: 175 ---SMGCGVSQ 182
S GC + Q
Sbjct: 3183 RGGSEGCNIPQ 3193
Score = 191 (72.3 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 55/168 (32%), Positives = 87/168 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPREI 77
+PS + L V +A G A+T EG V++ G + G+LG SSGT PR+I
Sbjct: 2978 VPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPI--PRQI 3035
Query: 78 RALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
ALS V V + +GG H+ A T DG +++WG + G++G +++ P + E
Sbjct: 3036 SALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC--DKPRLI---E 3090
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
++ I+ D+ACGS H+ A+ L+ G EY +L G +Q+
Sbjct: 3091 ALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQL 3136
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 47/152 (30%), Positives = 78/152 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ DIACG H A+T G ++SWG G G+LG+ + T + P+ ++ L G VVQ++
Sbjct: 3097 IRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ--LRPKLVKVLLGHRVVQVAC 3154
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T +G +++WG + G++G G + P + E + Q V +
Sbjct: 3155 GSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNI--PQNI---ERLNGQG--VCQIE 3207
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
CG++ +LAL +W G +Y +L G V
Sbjct: 3208 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3239
Score = 188 (71.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 48/144 (33%), Positives = 77/144 (53%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM- 72
S+ ++P ++ V I CG LALT+ G+V++WG G +LG+ GTD ++
Sbjct: 3186 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH---GTDVHVR 3242
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P+ + L G +V ++ G H A T+ G ++AWG N+ GQ G G V P +
Sbjct: 3243 KPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQG-NGTTT-VNRKP---T 3297
Query: 133 WSEDFDSQNIKVVDVACGSRHTLA 156
+ + Q K+ VACGS H++A
Sbjct: 3298 LVQGLEGQ--KITRVACGSSHSVA 3319
Score = 176 (67.0 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 47/144 (32%), Positives = 77/144 (53%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG + A+T +G + +WG G+ G+LG+ SS + P + AL GL V+ ++
Sbjct: 543 VVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSS--EDQTTPMLVTALKGLKVIDVAC 600
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T++G +++WG + G++G G D P + +D D +V V
Sbjct: 601 GSGDAQTLAVTENGQVWSWGDGDYGKLG-RGGSD-GCKTPKLVEKLQDLD-----IVKVC 653
Query: 149 CGSRHTLALCDDNSL--WGCGWNE 170
CGS+ ++AL D + WG G N+
Sbjct: 654 CGSQFSVALTKDGQVYTWGKGDNQ 677
Score = 161 (61.7 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 32/93 (34%), Positives = 55/93 (59%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ DL + + CG +ALT++G V++WG G +LG+ GTD ++ P+ +
Sbjct: 638 PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGH---GTDEHVRYPKLLD 694
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN 111
+L G VV I+ G H A T++G +++WG N+
Sbjct: 695 SLQGKRVVDIAVGSTHCLALTEEGEVHSWGSND 727
Score = 150 (57.9 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 54/173 (31%), Positives = 76/173 (43%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
D L+ G ++ WG+ RGQLG G + P AL+ L VQ+ G A
Sbjct: 3941 DWTLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKV-PTPTEALATLRPVQLIGGEQTLFAV 3998
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG LYA G+ GG++G+ G V P + E I+ V V G +H LAL
Sbjct: 3999 TADGKLYATGYGAGGRLGIGGTES--VSTPTLL---ESIQHVFIRKVAVNSGGKHCLALS 4053
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSA 211
+ L+ W E +G G S R V E ++ +V + A +SA
Sbjct: 4054 SEGELYS--WGEAEDGKLGHG--NRSPCDRPRVIESLRGVEVVDIAAGGAHSA 4102
Score = 135 (52.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 41/168 (24%), Positives = 77/168 (45%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + L + G A+T +G +++ G G+ G+LG GT++ P +
Sbjct: 3973 VPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGI--GGTESVSTPTLLE 4030
Query: 79 ALSGLGV--VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
++ + + V +++GG H A + +G LY+WG G++G G P
Sbjct: 4031 SIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLG-HGNRS-------PCDRPRV 4082
Query: 137 FDS-QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
+S + ++VVD+A G H+ + L+ G Y +L G Q+
Sbjct: 4083 IESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQL 4130
Score = 127 (49.8 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +A G HCLA+T+ G VF+WG+ GQ G + T N +P ++ L G + +++
Sbjct: 3255 IVHVAVGALHCLAVTETGQVFAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3312
Query: 91 GGWHSAART 99
G HS A T
Sbjct: 3313 GSSHSVAWT 3321
Score = 61 (26.5 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 100 QDGFLYA-W--GWNNGGQVGVEGKLDLVVHDPHPMSW--SEDFDSQN 141
+DG++ W G N ++G EGK DL + +P P + +ED D+++
Sbjct: 1893 EDGWIRVQWDTGSTNSYRMGKEGKYDLKLAEPPPATQPATEDSDTED 1939
Score = 42 (19.8 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 99 TQDGFLYAWGW 109
T DG + WGW
Sbjct: 3690 TSDGSVNGWGW 3700
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 217 (81.4 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 55/161 (34%), Positives = 85/161 (52%)
Query: 23 MDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS--SGTDANMEPREIRA 79
+D +LV + ++CG H AL+ G V++WG GS GQLG+ S SG D + PR +
Sbjct: 220 LDEAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSG-DKELIPRRVVG 278
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G+ + +++ GG H+ A + +G LYAWG GQ+G+ + +S +
Sbjct: 279 LDGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFS----VSNGSEMLL 334
Query: 140 QNIKVV----DV---ACGSRHTLALCDDNSLWGCGWNEYNQ 173
+N+ V+ DV ACG HTL + + G G+N Y Q
Sbjct: 335 RNVPVLVIPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQ 375
Score = 174 (66.3 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 45/155 (29%), Positives = 78/155 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSG-------- 82
+ ++CG H +AL++EG++ +WG +GQLG + + PR I A +
Sbjct: 168 IRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVT-CEGLQAPRVINAYAKFLDEAPEL 226
Query: 83 LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ ++Q+S G +H+AA + G +Y WG + GQ+G + L D + +
Sbjct: 227 VKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLG---HVSLQSGDKELIP-RRVVGLDGV 282
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +VACG HT AL + +L+ G + QL +G
Sbjct: 283 SMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLG 317
Score = 162 (62.1 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 59/200 (29%), Positives = 93/200 (46%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAG 91
DI+CG +H A+ +G +F+WG GQLG GT+ + P++++ L V +S G
Sbjct: 65 DISCGREHTAAVASDGSLFAWGANEYGQLG---DGTEVGRKHPKKVKQLQSEFVKFVSCG 121
Query: 92 GWHSAA----RTQDGFL-----YAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI 142
+ +AA R DG L + WG N G + P +S F +
Sbjct: 122 AFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNL--------------PRLFSGAFPATTA 167
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG--C-GVSQVSVMTRLS-----VPEH 194
+ V+CG+ H +AL ++ L G+NE QL G C G+ V+ + PE
Sbjct: 168 -IRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPEL 226
Query: 195 VKNCPIVKLFAEHWNSARLS 214
VK I++L +++A LS
Sbjct: 227 VK---IMQLSCGEYHTAALS 243
Score = 139 (54.0 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 45/153 (29%), Positives = 70/153 (45%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSG------TDAN 71
+P R+ + + ++ACG H AL+ EG +++WG G GQLG P SG +
Sbjct: 272 IPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSE 331
Query: 72 MEPREIRALS-GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
M R + L V ++ G H+ ++G + WG+N+ GQ E K + P P
Sbjct: 332 MLLRNVPVLVIPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANE-KSSYAWY-PSP 389
Query: 131 MSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+ W +V +A G H+ L D SL
Sbjct: 390 VDWCVG------QVRKLAAGGGHSAVLTDAFSL 416
Score = 121 (47.7 bits), Expect = 7.8e-05, P = 7.7e-05
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD---SQNIKVVDVACGSRHTLALCDD 160
+Y WG+N GQ G + + ++ P + E F N + +D++CG HT A+ D
Sbjct: 22 IYVWGYNQSGQTG-RNEQEKLLRIPKQLP-PELFGCPAGANSRWLDISCGREHTAAVASD 79
Query: 161 NSLWGCGWNEYNQLSMGCGVSQ 182
SL+ G NEY QL G V +
Sbjct: 80 GSLFAWGANEYGQLGDGTEVGR 101
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 216 (81.1 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 54/128 (42%), Positives = 74/128 (57%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+T IACG H LALT+EG V SWG+G GQLG SS P EI AL+ +V I++
Sbjct: 316 ITQIACGGYHSLALTEEGKVLSWGHGGHGQLG--SSSLRNQKVPTEIEALADKKIVFIAS 373
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-SEDFDSQNIKVVDVAC 149
GG SAA T G L+ WG Q+GV G L + P +++ +E+ + Q KV+ ++
Sbjct: 374 GGSSSAAITDGGELWMWGNAKDFQLGVPG-LPEIQTTPVEVNFLTEEDECQPHKVISISI 432
Query: 150 GSRHTLAL 157
G+ H L L
Sbjct: 433 GASHALCL 440
Score = 179 (68.1 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 49/167 (29%), Positives = 83/167 (49%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREI 77
+PS++ L + V ++CG +ALT+EG +++WG S +LG G + EP +
Sbjct: 253 VPSKVKA-LTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELG---RGDNLGGWEPMPV 308
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L G+ + QI+ GG+HS A T++G + +WG GQ+G + V P + D
Sbjct: 309 PSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKV--PTEIEALADK 366
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC-GVSQV 183
K+V +A G + A+ D LW W +G G+ ++
Sbjct: 367 -----KIVFIASGGSSSAAITDGGELWM--WGNAKDFQLGVPGLPEI 406
Score = 175 (66.7 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 51/166 (30%), Positives = 80/166 (48%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ VF +P+ F + + IA G H +ALT +G VF+WG G G LG+ + +
Sbjct: 138 NSVF-VPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRE--LV 194
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG-GQVGV-EGKLDLVVHDPHPM 131
PR + + I+ G H+AA T+ G LY WG G G++G+ G+ ++ +
Sbjct: 195 PRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGP---NEGGGL 251
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S + + V V+CG T+AL + LW G N +L G
Sbjct: 252 SVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG 297
Score = 141 (54.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 51/179 (28%), Positives = 82/179 (45%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+D I+CG H LT +G ++ WG G G+LG+ G + ++ +
Sbjct: 92 PGRIDADSSSFRIGISCGLFHS-GLTIDGDLWIWGKGDGGRLGF---GQENSVFVPNLNP 147
Query: 80 LSGLGVVQ-ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L ++ I+ GG HS A T G ++ WG+ G +G + +V P + D
Sbjct: 148 LFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELV--PRRVD-----D 200
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN-QLSMGCGVSQVSVMTRLSVPEHVK 196
S + K+ +A HT A+ + L+ G E + +L +G G + LSVP VK
Sbjct: 201 SWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGP-NEGGGLSVPSKVK 258
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 215 (80.7 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 58/184 (31%), Positives = 95/184 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI-RALSGLGVVQI 88
V ++ACG H +AL+ +G +++WG + GQ+G SG+ AN PR + L VV I
Sbjct: 130 VIEVACGSHHSMALSFDGDLYAWGYNNCGQVG---SGSTANQPTPRRVSNCLQDKMVVGI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ G ++ + ++ + ++ +A
Sbjct: 187 ACGQTSSMAVVNNGEVYGWGYNGNGQLGL-G------NNGNQLTPCRVAALHGVCILQIA 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
CG HTLAL D+ L+ G N Y QL G +Q+S + + E V I + H
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERVVE--IAACHSAHT 297
Query: 209 NSAR 212
++A+
Sbjct: 298 SAAK 301
Score = 210 (79.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 53/173 (30%), Positives = 92/173 (53%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
SQ +P +++ ++ ++ G H L T++G V++WG+ QLG + T+ +
Sbjct: 59 SQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLG--NGATNQGV 116
Query: 73 EPREIRA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPM 131
P ++ L V++++ G HS A + DG LYAWG+NN GQVG G + P P
Sbjct: 117 TPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVG-SGS---TANQPTPR 172
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
S Q+ VV +ACG ++A+ ++ ++G G+N QL +G +Q++
Sbjct: 173 RVSNCL--QDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 196 (74.1 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 51/151 (33%), Positives = 78/151 (51%)
Query: 20 PSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P R+ + L D +V IACG +A+ G V+ WG GQLG ++G + P +
Sbjct: 171 PRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQ--LTPCRVA 228
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G+ ++QI+ G H+ A T +G LYAWG N GQ+G K + + P + ++
Sbjct: 229 ALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQL--SPLQIMMEKE-- 284
Query: 139 SQNIKVVDVA-CGSRHTLALCDDNS---LWG 165
+VV++A C S HT A + +WG
Sbjct: 285 ----RVVEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 154 (59.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 39/99 (39%), Positives = 57/99 (57%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIR 78
P R+ + + IACG+ H LALT EG++++WG + GQLG +G +N + P +I
Sbjct: 224 PCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPLQIM 280
Query: 79 ALSGLGVVQISA-GGWH-SAARTQDGFLYAWGWNNGGQV 115
+ VV+I+A H SAA+TQ G +Y WG G V
Sbjct: 281 -MEKERVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSV 318
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 215 (80.7 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 51/168 (30%), Positives = 90/168 (53%)
Query: 19 MPSRMDHFLDLVVTDIACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +++ + ++ G H L T++G+V++WG+ QLG + T+ + P ++
Sbjct: 64 VPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG--NGTTNQGIAPIQV 121
Query: 78 RA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L VV+++ G HS A DG L+AWG+NN GQVG G + P P +
Sbjct: 122 CTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVG-SGS---TANQPTPRKVTNC 177
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
++ KVV++ACG ++A+ D ++G G+N QL +G +Q++
Sbjct: 178 LHTK--KVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 208 (78.3 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 59/184 (32%), Positives = 92/184 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI-RALSGLGVVQI 88
V ++ACG H +AL +G +F+WG + GQ+G SG+ AN PR++ L VV I
Sbjct: 130 VVEVACGSHHSMALAADGELFAWGYNNCGQVG---SGSTANQPTPRKVTNCLHTKKVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G+ + + P+ + + V +
Sbjct: 187 ACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT----PVRVAA---LHGVCVNQIV 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
CG HTLAL D+ L+ G N Y QL G + +S T++ V E + I + H
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSP-TQIMV-EKERVIEIAACHSTHT 297
Query: 209 NSAR 212
++A+
Sbjct: 298 SAAK 301
Score = 182 (69.1 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 48/139 (34%), Positives = 70/139 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +IACG +A+ G V+ WG GQLG ++G + P + AL G+ V QI
Sbjct: 183 VVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ--LTPVRVAALHGVCVNQIVC 240
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA-C 149
G H+ A T +G LYAWG N GQ+G K +L+ P + ++ +V+++A C
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLL--SPTQIMVEKE------RVIEIAAC 292
Query: 150 GSRHTLALCDDNS---LWG 165
S HT A +WG
Sbjct: 293 HSTHTSAAKTQGGHVYMWG 311
Score = 150 (57.9 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 38/99 (38%), Positives = 56/99 (56%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P R+ + V I CG+ H LALT EG++++WG + GQLG +G+ N+ P +I
Sbjct: 224 PVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQIM 280
Query: 79 ALSGLGVVQISA-GGWH-SAARTQDGFLYAWGWNNGGQV 115
+ V++I+A H SAA+TQ G +Y WG G V
Sbjct: 281 -VEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 318
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 221 (82.9 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 58/169 (34%), Positives = 90/169 (53%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++CGF+H L LT E +FS G GQLG + D+ + P + LS V++I A
Sbjct: 76 VVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENV-VDSAV-PLPVDTLSKFNVIKIKA 133
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD--P----HPMSWSEDFDS---QN 141
G SAA T+ G LY WG + GQ+G GK++ +H P +P+ + D QN
Sbjct: 134 GNNVSAAITEAGDLYCWGSSAYGQLG-NGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQN 192
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG-CGVSQVSVMTRL 189
++ ++ G++HT+A+ +++ G N+Y QL +G C V V L
Sbjct: 193 LQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHL 241
Score = 139 (54.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 37/111 (33%), Positives = 59/111 (53%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
VV I+ G +HSA T +G L+ WG N GQ+G LD V P + S +F +K+
Sbjct: 272 VVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSV--PKTVKGSLEF----VKI 325
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC--GVSQVSVMTRLSVPE 193
+A G+ HT+ L + ++ G NE+ QL G G +++ T++ P+
Sbjct: 326 NRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQIQKPK 376
Score = 118 (46.6 bits), Expect = 0.00092, P = 0.00092
Identities = 29/88 (32%), Positives = 50/88 (56%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR-ALSGLGVVQI 88
+V DIACG H LT EG +F WG+ GQLG S D ++ P+ ++ +L + + ++
Sbjct: 271 IVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDS-LDQSV-PKTVKGSLEFVKINRM 328
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVG 116
+ G H+ T++ ++ +G N Q+G
Sbjct: 329 ALGNNHTILLTKEQDVFTFGSNEFYQLG 356
Score = 86 (35.3 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 29/73 (39%), Positives = 39/73 (53%)
Query: 136 DFDSQNIK--VVDVACGSRHT--LALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV 191
DF ++ I VVD+ACG+ H+ L L D LWG N+Y QL G + Q SV
Sbjct: 262 DFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGS--NQYGQLGQGDSLDQ-------SV 312
Query: 192 PEHVK-NCPIVKL 203
P+ VK + VK+
Sbjct: 313 PKTVKGSLEFVKI 325
Score = 84 (34.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
+ +L T+I G H +A++ G +FSWG+ GQLG
Sbjct: 190 YQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLG 226
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 212 (79.7 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 49/168 (29%), Positives = 90/168 (53%)
Query: 19 MPSRMDHFLDLVVTDIACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +++ + ++ G H L T++G+V++WG+ QLG + T+ + P ++
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLG--NGTTNQGIAPVQV 121
Query: 78 RA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L V++++ G HS A DG L+AWG+NN GQVG G + P P +
Sbjct: 122 CTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVG-SGS---TANQPTPRKVTNC 177
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
++ +VV++ACG ++A+ D ++G G+N QL +G +Q++
Sbjct: 178 LHTK--RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 205 (77.2 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 59/184 (32%), Positives = 92/184 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI-RALSGLGVVQI 88
V ++ACG H +AL +G +F+WG + GQ+G SG+ AN PR++ L VV I
Sbjct: 130 VIEVACGSHHSMALAADGELFAWGYNNCGQVG---SGSTANQPTPRKVTNCLHTKRVVNI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A G +Y WG+N GQ+G+ + + P+ + + V +
Sbjct: 187 ACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT----PVRVAA---LHGMCVNQIV 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
CG HTLAL D+ L+ G N Y QL G + +S T++ V E + I + H
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSP-TQIMV-EKERVIEIAACHSTHT 297
Query: 209 NSAR 212
++A+
Sbjct: 298 SAAK 301
Score = 183 (69.5 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 48/139 (34%), Positives = 70/139 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +IACG +A+ G V+ WG GQLG ++G + P + AL G+ V QI
Sbjct: 183 VVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ--LTPVRVAALHGMCVNQIVC 240
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA-C 149
G H+ A T +G LYAWG N GQ+G K +L+ P + ++ +V+++A C
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLL--SPTQIMVEKE------RVIEIAAC 292
Query: 150 GSRHTLALCDDNS---LWG 165
S HT A +WG
Sbjct: 293 HSTHTSAAKTQGGHVYMWG 311
Score = 151 (58.2 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 38/99 (38%), Positives = 56/99 (56%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P R+ + V I CG+ H LALT EG++++WG + GQLG +G+ N+ P +I
Sbjct: 224 PVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQIM 280
Query: 79 ALSGLGVVQISA-GGWH-SAARTQDGFLYAWGWNNGGQV 115
+ V++I+A H SAA+TQ G +Y WG G V
Sbjct: 281 -VEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 318
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 216 (81.1 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 70/219 (31%), Positives = 100/219 (45%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + + V I+ G +H L+ G+VF WG+ S GQLG + TD + P +++
Sbjct: 160 PQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDT-TDRFI-PTIVKS 217
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
LSG V IS GG H+A ++ G ++ +G GQ+G D + HP +E + S
Sbjct: 218 LSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKD----EHHPRLVAELWGS 273
Query: 140 QNIKVVDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
KV V CG HTL D N ++ G QL G V Q SV + +P
Sbjct: 274 ---KVSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQ-SVPLPVLLPTECTEF 329
Query: 199 PIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGIL 237
+ KL A +S L +S K +G N GIL
Sbjct: 330 TMEKLIAGENHSFALFFKSPGNESEKPK--SGS-NGGIL 365
Score = 209 (78.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 50/146 (34%), Positives = 75/146 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANMEPREIRALSGLGVVQI 88
V IACG H +ALT +G +F WG + GQLG +GT + P+ +++L G+ V QI
Sbjct: 118 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQS---PQHLQSLCGIPVAQI 174
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
SAGG HS + G ++ WG N+ GQ+G+ D + P + K V ++
Sbjct: 175 SAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFI--PTIVK-----SLSGKKTVSIS 227
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
CG HT L +++ G + QL
Sbjct: 228 CGGEHTATLSKGGTVFTFGSGGFGQL 253
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 32/103 (31%), Positives = 46/103 (44%)
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R ++ L V+QI+ G HS A T DG L+ WG N GQ+G+ K P +
Sbjct: 108 RPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLR-KEQAGTQSPQHLQ-- 164
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I V ++ G H+ L ++G G N QL +G
Sbjct: 165 ---SLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLG 204
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 212 (79.7 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 71/231 (30%), Positives = 102/231 (44%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
L+ + P + + V I+ G +H L+ G+VF WG+ S GQLG + TD
Sbjct: 152 LRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDT-TD 210
Query: 70 ANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
P +++LSG V IS GG H+A ++ G ++ +G GQ+G D + H
Sbjct: 211 -RFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKD----EHH 265
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALCD-DNSLWGCGWNEYNQLSMGCGVSQVSVMTR 188
P +E + S KV V CG HTL L N ++ G QL G V Q SV
Sbjct: 266 PRLVAELWGS---KVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQ-SVPLP 321
Query: 189 LSVPEHVKNCPIV--KLFAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGIL 237
+ +P NC K+ A +S L +S+ K N GIL
Sbjct: 322 VLLPTDC-NCEFTMEKIIAGEKHSFALFFKNPGNESTKPK---SSMNGGIL 368
Score = 202 (76.2 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 48/144 (33%), Positives = 71/144 (49%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IACG H +AL+ +G +F WG + GQLG P+ +++L G+ V QISA
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQA-LIQSPQHLQSLCGIPVAQISA 178
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG HS + G ++ WG N+ GQ+G+ D V P + K V ++CG
Sbjct: 179 GGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFV--PTIVK-----SLSGKKTVSISCG 231
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
HT L +++ G + QL
Sbjct: 232 GEHTATLSKGGTVFTFGSGGFGQL 255
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/103 (31%), Positives = 48/103 (46%)
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R ++ L V+QI+ G HS A + DG L+ WG N GQ+G+ + L+ H S
Sbjct: 110 RPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC 169
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
I V ++ G H+ L ++G G N QL +G
Sbjct: 170 ------GIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLG 206
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 208 (78.3 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 53/149 (35%), Positives = 78/149 (52%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI-RALSGLGVVQI 88
V ++ACG H +AL +G VF+WG + GQ+G SG+ AN PR++ L VV I
Sbjct: 159 VVEVACGSHHSMALAADGEVFAWGYNNCGQVG---SGSTANQPTPRKVTNCLHIKRVVSI 215
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ + + P+ + ++ V +
Sbjct: 216 ACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT----PVRVAA---LHSVCVNQIV 268
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTLAL D+ L+ G N Y QL G
Sbjct: 269 CGYAHTLALTDEGLLYAWGANTYGQLGTG 297
Score = 206 (77.6 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 49/168 (29%), Positives = 89/168 (52%)
Query: 19 MPSRMDHFLDLVVTDIACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +++ + ++ G H L T++G+V++WG+ QLG + T+ + P ++
Sbjct: 93 VPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG--NGTTNQGIAPIQV 150
Query: 78 RA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L VV+++ G HS A DG ++AWG+NN GQVG G + P P +
Sbjct: 151 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG-SGS---TANQPTPRKVTNC 206
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ +VV +ACG ++A+ D+ ++G G+N QL +G +Q++
Sbjct: 207 LHIK--RVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT 252
Score = 180 (68.4 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 52/151 (34%), Positives = 73/151 (48%)
Query: 20 PSRMDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P ++ + L + V IACG +A+ G V+ WG GQLG ++G + P +
Sbjct: 200 PRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ--LTPVRVA 257
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL + V QI G H+ A T +G LYAWG N GQ+G K +L+ H M E
Sbjct: 258 ALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL-SPAHIMVEKE--- 313
Query: 139 SQNIKVVDVA-CGSRHTLALCDDNS---LWG 165
+VV++A C S HT A +WG
Sbjct: 314 ----RVVEIAACHSAHTSAAKTQGGHVYMWG 340
Score = 148 (57.2 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 39/99 (39%), Positives = 54/99 (54%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P R+ + V I CG+ H LALT EG++++WG + GQLG +G N+ P I
Sbjct: 253 PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIM 309
Query: 79 ALSGLGVVQISA-GGWH-SAARTQDGFLYAWGWNNGGQV 115
+ VV+I+A H SAA+TQ G +Y WG G V
Sbjct: 310 -VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 347
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 219 (82.2 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 56/149 (37%), Positives = 81/149 (54%)
Query: 31 VTDIACGF-D-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
V +ACG D LALT++G VFSWG+G G+LG G++ + P EI LSG+GVVQI
Sbjct: 3179 VVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVVQI 3236
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G S A T+ G ++ WG + ++G G D V P P+ + +V+ VA
Sbjct: 3237 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIG-----GLRGRRVIHVA 3289
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G+ H LA+ D ++ G N++ Q G
Sbjct: 3290 VGALHCLAVTDAGQVYAWGDNDHGQQGSG 3318
Score = 203 (76.5 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 54/169 (31%), Positives = 84/169 (49%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
S + +P+ + + V +A G HCLALT EG V++WG G G+LG+ G +
Sbjct: 4119 SDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH---GNRMS 4175
Query: 72 ME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHP 130
+ P+ + L+G+ V I+ G HSAA T G + WG G++G D + P
Sbjct: 4176 YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL----RP 4231
Query: 131 MSWSEDFDSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG 177
E + +D+ACGS TL + DD+++W G +Y +L G
Sbjct: 4232 -KLVEAL--LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4277
Score = 202 (76.2 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 53/160 (33%), Positives = 80/160 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHC--LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ L DIACG L +T + V+SWG+G G+LG G+D P +I
Sbjct: 4231 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG--RGGSDGCKLPYKI 4288
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+L+GLGVV++ G S A T+ G +Y WG + ++G G +D H P +
Sbjct: 4289 ESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG-HGSVD---HVRRPKKVAA-- 4342
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
Q K++ +A GS H +A D ++ G N+ QL G
Sbjct: 4343 -LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDG 4381
Score = 198 (74.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 46/139 (33%), Positives = 73/139 (52%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ L V + CG +ALT+ G V++WG G +LG+ S D P+++
Sbjct: 4284 LPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS--VDHVRRPKKVA 4341
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G ++ I+ G H A + G +Y WG N+ GQ+G +G + + P ++
Sbjct: 4342 ALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTVT-AIQRPRLVA-----A 4394
Query: 139 SQNIKVVDVACGSRHTLAL 157
Q +V V CGS HTLAL
Sbjct: 4395 LQGKHIVKVTCGSAHTLAL 4413
Score = 198 (74.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 46/149 (30%), Positives = 80/149 (53%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ D+ACG H A++ +G +++WG G G+LG+ + T ++P+ + AL+G VVQ++
Sbjct: 3127 IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ--LKPKLVTALAGRRVVQVAC 3184
Query: 91 GGW--HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G + A T+DG +++WG + G++G G PH + I VV +
Sbjct: 3185 GSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGS--DTPHEIE-----RLSGIGVVQIE 3237
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG++ +LAL +W G +Y +L G
Sbjct: 3238 CGAQFSLALTRAGEVWTWGKGDYYRLGHG 3266
Score = 189 (71.6 bits), Expect = 9.7e-13, P = 9.7e-13
Identities = 56/164 (34%), Positives = 83/164 (50%)
Query: 19 MPSRMDHFLDLVVTDIAC--GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPR 75
+P ++ VV +A G H LALT +G VFSWG G G+LG+ + T D +PR
Sbjct: 3061 LPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLD---KPR 3117
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ AL + ++ G HSAA + G LY WG G++G G + P ++
Sbjct: 3118 LVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG-HGD-NTTQLKPKLVT--- 3172
Query: 136 DFDSQNIKVVDVACGSR--HTLALCDDNSLWGCGWNEYNQLSMG 177
+VV VACGSR TLAL +D +++ G ++ +L G
Sbjct: 3173 --ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3214
Score = 177 (67.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 45/163 (27%), Positives = 80/163 (49%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++H + V DIACG H A+T G V +WG G G+LG+ S + + P+
Sbjct: 4176 YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS--EDQLRPKL 4233
Query: 77 IRALSGLGVVQISAGGWHSAAR--TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
+ AL G + I+ G + T D +++WG + G++G G + P+ +
Sbjct: 4234 VEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKL--PYKIE-- 4289
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ VV V CGS+ ++AL +++ G ++++L G
Sbjct: 4290 ---SLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4329
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 52/160 (32%), Positives = 82/160 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFD--HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+P+ + D +V D+A G H LALT EG+VF+WG+G G+LG + + +++P
Sbjct: 710 LPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG--NGNCNGSLQPIL 767
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNN--GGQVGVEGKLDLVVHDPHPMSWS 134
+ +L V ++ AG S A + +G LY WG G Q+ VE + P +S
Sbjct: 768 VESLPR--VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQL-VERSVQ-GCSVPRLVS-- 821
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
Q+ ++VDVA H LAL ++G G N+ Q+
Sbjct: 822 ---SLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 166 (63.5 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 48/138 (34%), Positives = 70/138 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P ++ + V I CG LALT+ G V++WG G +LG+ G D ++ +P+ I
Sbjct: 3222 PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH---GGDQHVRKPQPIG 3278
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V+ ++ G H A T G +YAWG N+ GQ G G V P + D
Sbjct: 3279 GLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG-SGNT-FVNKKPALVI---GLD 3333
Query: 139 SQNIKVVDVACGSRHTLA 156
+ + V VACGS H++A
Sbjct: 3334 A--VFVNRVACGSSHSIA 3349
Score = 159 (61.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGV--VQISA 90
IA G ++Q+G V++ G G+ G+LG G N+ P ++ L V V + +
Sbjct: 3024 IAGGSKSLFIVSQDGKVYACGEGTNGRLGL---GVTHNVPLPHQLPVLRQYVVKKVAVHS 3080
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ A T DG +++WG G++G + L P + E ++ I+ DVACG
Sbjct: 3081 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL--DKPRLV---EALRAKKIR--DVACG 3133
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQV 183
S H+ A+ L+ G EY +L G +Q+
Sbjct: 3134 SSHSAAISSQGELYTWGLGEYGRLGHGDNTTQL 3166
Score = 152 (58.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 48/154 (31%), Positives = 77/154 (50%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV--VQISAG 91
+A G A+T +G +F+ G GS G+LG G+D+ P + +L + V V +++G
Sbjct: 4087 LAGGEQSLFAVTPDGKLFATGYGSGGRLGV--GGSDSWAIPTLLGSLQHVFVKKVAVNSG 4144
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
G H A T +G +YAWG G++G ++ +D P E + + V D+ACGS
Sbjct: 4145 GKHCLALTTEGEVYAWGEGEDGKLGHGNRMS---YD-RP-KLVEHLNGMS--VADIACGS 4197
Query: 152 RHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQV 183
H+ A+ + WG G Y +L G Q+
Sbjct: 4198 AHSAAITASGHVLTWGKG--RYGRLGHGDSEDQL 4229
Score = 143 (55.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 50/180 (27%), Positives = 80/180 (44%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
D L+ ++ WG+ RGQLG G+ P ALS L VQ++ G A
Sbjct: 4040 DWALSWGGASTIYGWGHNHRGQLG-GLEGSRIKT-PTPCEALSLLRPVQLAGGEQSLFAV 4097
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
T DG L+A G+ +GG++GV G + P + +K V V G +H LAL
Sbjct: 4098 TPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLG---SLQHVFVKKVAVNSGGKHCLALT 4152
Query: 159 DDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEH 218
+ ++ W E +G G +++S R + EH+ + + +SA ++ H
Sbjct: 4153 TEGEVYA--WGEGEDGKLGHG-NRMSY-DRPKLVEHLNGMSVADIACGSAHSAAITASGH 4208
Score = 135 (52.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 48/176 (27%), Positives = 86/176 (48%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+++ V + CG + A+T G + +WG G+ +LG+ +S D ++ P +
Sbjct: 658 VPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSD-DRSL-PTLVV 715
Query: 79 ALSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSW 133
ALS VV ++ G HS A T +G ++AWG + G++G G L ++ + P
Sbjct: 716 ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--- 772
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSL--WG---CGWNEYNQLSM-GCGVSQV 183
+V V GS+ ++AL + L WG C ++ + S+ GC V ++
Sbjct: 773 ---------RVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRL 819
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 54/178 (30%), Positives = 76/178 (42%)
Query: 20 PSRMDHFLDLVVTDIA--CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P M+ V IA C H LA+ +SWG G +LG+ T A P +I
Sbjct: 605 PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGH--GDTHARAVPTKI 662
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
AL V + G +SAA T G L WG ++G G D ++ S+
Sbjct: 663 AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLG-HGNSDDRSLPTLVVALSDHM 721
Query: 138 DSQNIKVVDVACGS--RHTLALCDDNSLWGCGWNEYNQLSMG-CGVSQVSVMTRLSVP 192
VVDVA GS H+LAL + ++ G +Y +L G C S ++ S+P
Sbjct: 722 ------VVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE-SLP 772
Score = 47 (21.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 31 VTDIACGFDHCLALTQEGIVFSW 53
+ +AC L L+QEG +++W
Sbjct: 574 IKQVACCETQMLILSQEGKLYTW 596
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 152 (58.6 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 59 GQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
GQLG+ S ++ +PR + AL G+ + ++AGGWHSA + G LY WGWN GQ+G+
Sbjct: 11 GQLGHGS--LESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGLP 68
Query: 119 GK 120
+
Sbjct: 69 SR 70
Score = 107 (42.7 bits), Expect = 0.00072, P = 0.00072
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P+ +D L+ V ++CG H ALT+ G + +WG G GQLG+ G A+ + PR +
Sbjct: 107 PALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGH---GDRASCDHPRRVE 163
Query: 79 AL--SGLGVVQISAGGWHS 95
L GL ++ G W++
Sbjct: 164 QLWAEGLRAQEVVCGPWNT 182
Score = 94 (38.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 25/70 (35%), Positives = 35/70 (50%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V +S G H+AA T+ G L WGW GQ+G G D D HP E ++ ++
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLG-HG--DRASCD-HPRR-VEQLWAEGLRA 172
Query: 145 VDVACGSRHT 154
+V CG +T
Sbjct: 173 QEVVCGPWNT 182
Score = 81 (33.6 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V V+CGSRHT AL L GW +Y QL G
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHG 151
Score = 60 (26.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
+A G H ++ G ++ WG GQLG PS
Sbjct: 38 VAAGGWHSACVSDGGDLYVWGWNESGQLGLPS 69
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 206 (77.6 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 53/149 (35%), Positives = 78/149 (52%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI-RALSGLGVVQI 88
V ++ACG H +AL +G VF+WG + GQ+G SG+ AN PR++ L VV I
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVG---SGSTANQPTPRKVTNCLHIKRVVGI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ + + P+ + ++ V +
Sbjct: 187 ACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT----PVRVAA---LHSVCVNQIV 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTLAL D+ L+ G N Y QL G
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Score = 205 (77.2 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 49/168 (29%), Positives = 89/168 (52%)
Query: 19 MPSRMDHFLDLVVTDIACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +++ + ++ G H L T++G+V++WG+ QLG + T+ + P ++
Sbjct: 64 VPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG--NGTTNQGIAPVQV 121
Query: 78 RA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L VV+++ G HS A DG ++AWG+NN GQVG G + P P +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG-SGS---TANQPTPRKVTNC 177
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ +VV +ACG ++A+ D+ ++G G+N QL +G +Q++
Sbjct: 178 LHIK--RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 179 (68.1 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 52/151 (34%), Positives = 73/151 (48%)
Query: 20 PSRMDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P ++ + L + V IACG +A+ G V+ WG GQLG ++G + P +
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ--LTPVRVA 228
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL + V QI G H+ A T +G LYAWG N GQ+G K +L+ H M E
Sbjct: 229 ALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL-SPAHIMVEKE--- 284
Query: 139 SQNIKVVDVA-CGSRHTLALCDDNS---LWG 165
+VV++A C S HT A +WG
Sbjct: 285 ----RVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 148 (57.2 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 39/99 (39%), Positives = 54/99 (54%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P R+ + V I CG+ H LALT EG++++WG + GQLG +G N+ P I
Sbjct: 224 PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIM 280
Query: 79 ALSGLGVVQISA-GGWH-SAARTQDGFLYAWGWNNGGQV 115
+ VV+I+A H SAA+TQ G +Y WG G V
Sbjct: 281 -VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 318
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 206 (77.6 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 53/149 (35%), Positives = 78/149 (52%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI-RALSGLGVVQI 88
V ++ACG H +AL +G VF+WG + GQ+G SG+ AN PR++ L VV I
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVG---SGSTANQPTPRKVTNCLHIKRVVGI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ + + P+ + ++ V +
Sbjct: 187 ACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT----PVRVAA---LHSVCVNQIV 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTLAL D+ L+ G N Y QL G
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Score = 206 (77.6 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 49/168 (29%), Positives = 89/168 (52%)
Query: 19 MPSRMDHFLDLVVTDIACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +++ + ++ G H L T++G+V++WG+ QLG + T+ + P ++
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG--NGTTNQGLAPIQV 121
Query: 78 RA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L VV+++ G HS A DG ++AWG+NN GQVG G + P P +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG-SGS---TANQPTPRKVTNC 177
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ +VV +ACG ++A+ D+ ++G G+N QL +G +Q++
Sbjct: 178 LHIK--RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 178 (67.7 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 51/151 (33%), Positives = 73/151 (48%)
Query: 20 PSRMDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P ++ + L + V IACG +A+ G V+ WG GQLG ++G + P +
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ--LTPVRVA 228
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL + V QI G H+ A T +G LYAWG N GQ+G K +L+ H M E
Sbjct: 229 ALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL-SPAHIMVEKE--- 284
Query: 139 SQNIKVVDVA-CGSRHTLALCDDNS---LWG 165
+V+++A C S HT A +WG
Sbjct: 285 ----RVIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 147 (56.8 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 38/99 (38%), Positives = 54/99 (54%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P R+ + V I CG+ H LALT EG++++WG + GQLG +G N+ P I
Sbjct: 224 PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIM 280
Query: 79 ALSGLGVVQISA-GGWH-SAARTQDGFLYAWGWNNGGQV 115
+ V++I+A H SAA+TQ G +Y WG G V
Sbjct: 281 -VEKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 318
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 205 (77.2 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 49/168 (29%), Positives = 89/168 (52%)
Query: 19 MPSRMDHFLDLVVTDIACGFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +++ + ++ G H L T++G+V++WG+ QLG + T+ + P ++
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG--NGTTNQGIAPIQV 121
Query: 78 RA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
L VV+++ G HS A DG ++AWG+NN GQVG G + P P +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG-SGS---TTNQPTPRKVTNC 177
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ +VV +ACG ++A+ D+ ++G G+N QL +G +Q++
Sbjct: 178 LHIK--RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT 223
Score = 202 (76.2 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 52/149 (34%), Positives = 77/149 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI-RALSGLGVVQI 88
V ++ACG H +AL +G VF+WG + GQ+G SG+ N PR++ L VV I
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVG---SGSTTNQPTPRKVTNCLHIKRVVGI 186
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G S A +G +Y WG+N GQ+G+ + + P+ + ++ V +
Sbjct: 187 ACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT----PVRVAA---LHSVCVNQIV 239
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG HTLAL D+ L+ G N Y QL G
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Score = 179 (68.1 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 52/151 (34%), Positives = 73/151 (48%)
Query: 20 PSRMDHFLDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
P ++ + L + V IACG +A+ G V+ WG GQLG ++G + P +
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ--LTPVRVA 228
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL + V QI G H+ A T +G LYAWG N GQ+G K +L+ H M E
Sbjct: 229 ALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL-SPAHIMVEKE--- 284
Query: 139 SQNIKVVDVA-CGSRHTLALCDDNS---LWG 165
+VV++A C S HT A +WG
Sbjct: 285 ----RVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 148 (57.2 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 39/99 (39%), Positives = 54/99 (54%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIR 78
P R+ + V I CG+ H LALT EG++++WG + GQLG +G N+ P I
Sbjct: 224 PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIM 280
Query: 79 ALSGLGVVQISA-GGWH-SAARTQDGFLYAWGWNNGGQV 115
+ VV+I+A H SAA+TQ G +Y WG G V
Sbjct: 281 -VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 318
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 203 (76.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 55/142 (38%), Positives = 74/142 (52%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D +T +ACG H L LT+ VF+ G GQLG + A M+P E+ L ++
Sbjct: 81 DHSITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHA-MDPLEVSGLDK-DILH 138
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
ISAG +HSAA T DG LY WG N+ GQ+G+ K VV P + I + V
Sbjct: 139 ISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVE-----ALHGITIQSV 193
Query: 148 ACGSRHTLALCDDNSL--WGCG 167
A GS H++A+ D + WG G
Sbjct: 194 ALGSEHSVAVTDGGEVLSWGGG 215
Score = 176 (67.0 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 46/169 (27%), Positives = 79/169 (46%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
LD + I+ G+ H A+T +G ++ WG S GQLG P ++ AL G+ +
Sbjct: 132 LDKDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQ 191
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL--VVHDPHPMSWSEDFDSQNIKV 144
++ G HS A T G + +WG G++G + L ++ + + + IKV
Sbjct: 192 SVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKV 251
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS-VP 192
+VA G H+ ++ S + G N++ G GV + + +S VP
Sbjct: 252 TNVAAGLLHSACTDENGSAFMFGEKSINKMGFG-GVRNATTPSIISEVP 299
Score = 167 (63.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/175 (29%), Positives = 88/175 (50%)
Query: 6 ASGPL---KMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
+SG L K ++V +P++++ + + +A G +H +A+T G V SWG G G+LG
Sbjct: 162 SSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLG 221
Query: 63 Y--PSS--G---TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
+ SS G +++ PR I+ L G+ V ++AG HSA ++G + +G + ++
Sbjct: 222 HGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKM 281
Query: 116 GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
G G V + P SE ++ +VACG HT + L+ G NE
Sbjct: 282 GFGG----VRNATTPSIISEVPYAE-----EVACGGYHTCVVTRGGELYTWGSNE 327
Score = 145 (56.1 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 41/138 (29%), Positives = 63/138 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
VT++A G H + G F +G S ++G+ G P I + +++
Sbjct: 251 VTNVAAGLLHSACTDENGSAFMFGEKSINKMGF--GGVRNATTPSIISEVPY--AEEVAC 306
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG+H+ T+ G LY WG N G +G + V H P + +S V V+CG
Sbjct: 307 GGYHTCVVTRGGELYTWGSNENGCLGTDSTY--VSHSPVRVE-GPFLEST---VSQVSCG 360
Query: 151 SRHTLALCDDNSL-WGCG 167
+HT A+ D+N WG G
Sbjct: 361 WKHTAAISDNNVFTWGWG 378
Score = 138 (53.6 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 45/156 (28%), Positives = 72/156 (46%)
Query: 53 WGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
WG+G G+LG D+ P ALS + ++ GG H+ T+ ++A G N+
Sbjct: 54 WGSGDYGRLGL--GNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDC 111
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
GQ+GV D+ H P+ S D ++ ++ G H+ A+ D L+ G N
Sbjct: 112 GQLGVS---DVKSHAMDPLEVS-GLDKD---ILHISAGYYHSAAITVDGELYMWGKNSSG 164
Query: 173 QLSMGCGVSQV-SVMTRLSVPEHVKNCPIVKLFAEH 207
QL +G ++V V T++ H V L +EH
Sbjct: 165 QLGLGKKAARVVRVPTKVEAL-HGITIQSVALGSEH 199
Score = 129 (50.5 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 37/134 (27%), Positives = 63/134 (47%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAG 91
++ACG H +T+ G +++WG+ G LG S T + P + V Q+S G
Sbjct: 303 EVACGGYHTCVVTRGGELYTWGSNENGCLGTDS--TYVSHSPVRVEGPFLESTVSQVSCG 360
Query: 92 GWHSAARTQDGFLYAWGWNNG-GQVGVEGKLD--LVVHDPHPMSWSED--FD-SQNIKVV 145
H+AA D ++ WGW G V+G + H + ++ D +N++ V
Sbjct: 361 WKHTAA-ISDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSD-VDYARPAMVDLGKNVRAV 418
Query: 146 DVACGSRHTLALCD 159
++CG HT A+ +
Sbjct: 419 HISCGFNHTAAVLE 432
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 209 (78.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 68/221 (30%), Positives = 98/221 (44%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P + ++ V I+ G +H L+ G+VF WG+ S GQLG T P +++
Sbjct: 159 PQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGL--GDTKDRFVPTIVKS 216
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L G V IS GG H+A ++ G ++ +G GQ+G D + HP +E + S
Sbjct: 217 LCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKD----EHHPRLIAELWGS 272
Query: 140 QNIKVVDVACGSRHTLALCDDNSL---WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
KV V CG HTL + + L +GCG QL G V Q SV + +P
Sbjct: 273 ---KVSQVTCGRHHTLVFEESSKLIYSFGCGMQ--GQLGNGEQVKQ-SVPLPVLLPTECT 326
Query: 197 NCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGIL 237
+ KL +S L +S K +G N GIL
Sbjct: 327 EFTMEKLITGEHHSFALFFKNPGNESEKPK--SGS-NGGIL 364
Score = 196 (74.1 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 49/146 (33%), Positives = 74/146 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--PSSGTDANMEPREIRALSGLGVVQI 88
V IACG H +AL+ +G +F WG + GQLG +GT + P+ +++L + V QI
Sbjct: 117 VIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQS---PQHLQSLCEIPVAQI 173
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
SAGG HS + G ++ WG N+ GQ+G+ D V P + K V ++
Sbjct: 174 SAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFV--PTIVK-----SLCGKKTVSIS 226
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQL 174
CG HT L +++ G + QL
Sbjct: 227 CGGEHTATLSKGGTVFTFGSGGFGQL 252
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP-HPMSW 133
R +++L V+QI+ G HS A + DG L+ WG N GQ+G+ K P H S
Sbjct: 107 RPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLR-KEQAGTQSPQHLQSL 165
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E I V ++ G H+ L ++G G N QL +G
Sbjct: 166 CE------IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLG 203
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 209 (78.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 57/148 (38%), Positives = 80/148 (54%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----YPSSGTDANMEPREIRALSGLGVV 86
+ I CG H LAL++ G +F+WG GQLG +PS+ T P+ + L+G+ +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTT-----PQIVEHLAGVPLA 194
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QISAG HS A + G +Y+WG N GQ+G+ G + DP S E D+Q KV
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGL-GHTESK-DDP---SLIEGLDNQ--KVEF 247
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
VACG H+ L D L+ G ++ QL
Sbjct: 248 VACGGSHSALLTQDGLLFTFGAGKHGQL 275
Score = 185 (70.2 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 53/179 (29%), Positives = 83/179 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++H + + I+ G H +AL+ G ++SWG GQLG T++ +P I
Sbjct: 182 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGL--GHTESKDDPSLIEG 239
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L V ++ GG HSA TQDG L+ +G GQ+G ++ P +E
Sbjct: 240 LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS----TQNELRPCLVAE---L 292
Query: 140 QNIKVVDVACGSRHTLALCDD-NSLWGCGWNEYNQLSMGCGVSQVSVM-TRLSVPEHVK 196
+V +ACG HTLA D ++ G + QL G Q+ + ++S E +K
Sbjct: 293 VGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 192 (72.6 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 58/198 (29%), Positives = 96/198 (48%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD--ANMEPREI 77
P R+ V A G +H L LT+ G V+S+G +L + S + AN E
Sbjct: 32 PERLPGLCGKTVLQAALGTNHGLLLTEGGEVYSFG-----KLPWRSGPEEFCANSPILE- 85
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L G V+ ++AG +H+ A T+ G +Y WG N+ GQ V + V +P P+S S+
Sbjct: 86 NTLLGQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQP--YVPEPQPISISDSE 143
Query: 138 DSQ--NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
S +++V+ +ACG HTLAL +W W QL + ++ +T+ EH+
Sbjct: 144 TSPLLSVRVLQLACGEEHTLALSLSREIWA--WGSGCQLGL---ITTTFPVTKPQKVEHL 198
Query: 196 KNCPIVKLFAEHWNSARL 213
++++ ++S L
Sbjct: 199 AGRVVLQIACGAYHSLAL 216
Score = 139 (54.0 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V+SWG G GQLG+ ++P +++L G V+Q+SAGG HS A T +Y+WG
Sbjct: 523 VWSWGRGKDGQLGH--GDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGS 580
Query: 110 NNGGQVG 116
N GQ+G
Sbjct: 581 NIFGQLG 587
Score = 115 (45.5 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
S L + V +ACG +H LAL+ +++WG+G QLG ++ T +P+++ L
Sbjct: 142 SETSPLLSVRVLQLACGEEHTLALSLSREIWAWGSGC--QLGLITT-TFPVTKPQKVEHL 198
Query: 81 SGLGVVQISAGGWHSAARTQ 100
+G V+QI+ G +HS A Q
Sbjct: 199 AGRVVLQIACGAYHSLALVQ 218
Score = 65 (27.9 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQ 46
P +++H VV IACG H LAL Q
Sbjct: 192 PQKVEHLAGRVVLQIACGAYHSLALVQ 218
Score = 63 (27.2 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 107 WGWNNG--GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
W W G GQ+G G V+ P+ + D + +V+ ++ G H+LAL + ++
Sbjct: 524 WSWGRGKDGQLG-HGD---VLPRLQPLC-VKSLDGK--EVIQLSAGGHHSLALTAKSQVY 576
Query: 165 GCGWNEYNQL 174
G N + QL
Sbjct: 577 SWGSNIFGQL 586
Score = 48 (22.0 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 204 FAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGILV 238
F+++W + I LF+G W SGI +
Sbjct: 1217 FSDNWTLSGKGTLTLPNGDYIEGLFSGEWGSGIKI 1251
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 192 (72.6 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 60/185 (32%), Positives = 94/185 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V A G H L L + G V+S+G Q P A++ LSG V+ +SA
Sbjct: 34 VLHAALGSLHGLLLIEGGQVYSFGE----QPWKPVEPPPASLVLES--TLSGQHVISVSA 87
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED--FDSQNIKVVDVA 148
G +H +A T+DG + WG N+ GQ GV G D V P P++ +D Q ++V++VA
Sbjct: 88 GSYHCSAVTEDGLVLMWGENSYGQCGVSGT-DRVP-SPTPVTVVDDETHPPQLVRVLNVA 145
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHW 208
CG++HTLAL + + +W W QL + V+ V + + EH+ +V++ +
Sbjct: 146 CGAQHTLALSNKHEVWA--WGSGCQLGL---VTNVFPVWKPQKVEHLVGRYVVQIACGAF 200
Query: 209 NSARL 213
+S L
Sbjct: 201 HSLAL 205
Score = 143 (55.4 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 42/110 (38%), Positives = 57/110 (51%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V+SWG G GQLG+ ++P I++LS VV+I+AG HS A T +Y+WG
Sbjct: 522 VWSWGKGHEGQLGH--GDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGS 579
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
GQ+G V P+ + S+ I+V DVA G HTL L D
Sbjct: 580 EKFGQLGRMNSPSTV---PNLTTVSD-----GIRVWDVAAGQTHTLLLAD 621
Score = 67 (28.6 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 10 LKMLSQVFHM--PSRMDHFLDLVVTDIACGFDHCLALTQ 46
L +++ VF + P +++H + V IACG H LAL Q
Sbjct: 169 LGLVTNVFPVWKPQKVEHLVGRYVVQIACGAFHSLALVQ 207
Score = 47 (21.6 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 204 FAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGILV 238
F + W + S +F GHW SG+ V
Sbjct: 1197 FQDDWTLCGKGILFMPNGDSFDGVFDGHWGSGLRV 1231
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 202 (76.2 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 57/166 (34%), Positives = 80/166 (48%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G DH L+L +G +++WG S GQLG + T A P ++ G+ V ++AG
Sbjct: 630 IAAGQDHGLSLQADGTLWAWGANSVGQLG--NGVTTATFTPVQVINAEGVPYVSLAAGTS 687
Query: 94 HSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDFDSQNIKVVD---V 147
HS A DG L+AWG N GQ+G G D + PH + + S + D V
Sbjct: 688 HSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVP-ARILTSNPVSAADDWLV 746
Query: 148 A-CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
A G H+ AL + +LW G N QL G ++ + T L P
Sbjct: 747 ATAGGSHSAALKSNGTLWTWGQNTSGQLGNGT-TTEADIPTALLEP 791
Score = 180 (68.4 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 50/146 (34%), Positives = 74/146 (50%)
Query: 44 LTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA--LSGLGVVQISAGGWHSAARTQD 101
L +G ++SWGN G+LG T + +P ++ A LS V ++AGG H+ A D
Sbjct: 150 LKGDGTLWSWGNNLFGELG--DGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQAD 207
Query: 102 GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDN 161
G L+AWG N GQ+G G ++ +P P+ D D I + G H++AL D
Sbjct: 208 GTLWAWGANLTGQLGTGGTG--ILPNPTPLKIGTDRDWTAI-----SAGEMHSVALKADG 260
Query: 162 SLWGCGWNEYNQLSMGCGVSQVSVMT 187
SLW G N + +L G + +V T
Sbjct: 261 SLWSWGQNLFGELGNGVALPGANVTT 286
Score = 179 (68.1 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 52/145 (35%), Positives = 71/145 (48%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRALSGLGVVQISAGG 92
+A G H L + +G +++WG+ GQLG P +G A + IR +G V +SAG
Sbjct: 85 VAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGE 144
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
S DG L++WG N G++G +G V P P+ D N + V VA G
Sbjct: 145 LTSFGLKGDGTLWSWGNNLFGELG-DGT---TVSRPQPVQVVAD-PLSNGRYVAVAAGGE 199
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LAL D +LW G N QL G
Sbjct: 200 HALALQADGTLWAWGANLTGQLGTG 224
Score = 165 (63.1 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 47/141 (33%), Positives = 68/141 (48%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW-HSAARTQ 100
L L G +++WG + GQLG T + P + + G G + +A G HS A
Sbjct: 411 LGLRSNGTLWAWGGNASGQLG--DGTTTPSAIP--VPVVGGAGNWRTTATGTAHSVAVRA 466
Query: 101 DGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
DG L+AWG N+ GQ+G+ G + P ++ + + N VA G H+L L D
Sbjct: 467 DGTLWAWGDNSSGQLGI-GST-VAASTPQQITVTNPASAGNDWTA-VAGGGAHSLGLKAD 523
Query: 161 NSLWGCGWNEYNQLSMGCGVS 181
+LW G N + QL G G S
Sbjct: 524 GTLWSWGDNTFGQLGDGTGTS 544
Score = 160 (61.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 55/181 (30%), Positives = 86/181 (47%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR----ALSGLGVVQISA 90
A G H +A+ +G +++WG+ S GQLG S T A P++I A +G ++
Sbjct: 455 ATGTAHSVAVRADGTLWAWGDNSSGQLGIGS--TVAASTPQQITVTNPASAGNDWTAVAG 512
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE--DFDSQNIKVVDVA 148
GG HS DG L++WG N GQ+G +G P + +FD +N V VA
Sbjct: 513 GGAHSLGLKADGTLWSWGDNTFGQLG-DGTGTSNRTTPVQIVTGNPGNFD-RNW--VAVA 568
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC-PIVKLFAEH 207
G +LAL D ++W W + + L +G + ++ T+ +VP + P F
Sbjct: 569 AGGVFSLALQADGTIWT--WGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSS 626
Query: 208 W 208
W
Sbjct: 627 W 627
Score = 155 (59.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 51/166 (30%), Positives = 78/166 (46%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+A G +H LAL +G +++WG GQLG + GT P ++ + ISAG
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLG--TGGTGILPNPTPLKIGTDRDWTAISAGEM 251
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSEDFDSQNIKVVDVACGSR 152
HS A DG L++WG N G++G L V P + D+ V +A G+
Sbjct: 252 HSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDW-------VAIAAGAL 304
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCG-VSQVSVMTRLSVPEHVKN 197
HT+AL + ++ W Q ++G G V+ S T + P + N
Sbjct: 305 HTVALHRNGTV--SAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVN 348
Score = 155 (59.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 58/182 (31%), Positives = 82/182 (45%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RALSG---LGVVQ 87
T +A G H L L +G ++SWG+ + GQLG +GT P +I G V
Sbjct: 508 TAVAGGGAHSLGLKADGTLWSWGDNTFGQLG-DGTGTSNRTTPVQIVTGNPGNFDRNWVA 566
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLVVHDPHPMSW---SEDFDSQNIK 143
++AGG S A DG ++ WG N+ Q+G + L P S + N
Sbjct: 567 VAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSS 626
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
V +A G H L+L D +LW G N QL G GV+ + T + V + + P V L
Sbjct: 627 WVAIAAGQDHGLSLQADGTLWAWGANSVGQL--GNGVT-TATFTPVQVI-NAEGVPYVSL 682
Query: 204 FA 205
A
Sbjct: 683 AA 684
Score = 148 (57.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 48/153 (31%), Positives = 72/153 (47%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANME--PREIRALSGLGV----- 85
+A G LAL +G +++WG+ S QLG P+ T A P ++ S
Sbjct: 567 VAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSS 626
Query: 86 -VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V I+AG H + DG L+AWG N+ GQ+G G + P + +++ +
Sbjct: 627 WVAIAAGQDHGLSLQADGTLWAWGANSVGQLG-NG-VTTATFTPVQV-----INAEGVPY 679
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V +A G+ H+LA D +LW G N QL G
Sbjct: 680 VSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTG 712
Score = 139 (54.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 49/156 (31%), Positives = 71/156 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQIS 89
V +A G +H L L +G +++ G+ GQLG GT N P ++ G ++
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLG---DGTGINRTSPVQV---PGTWKT-VA 86
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
AG HS DG L+AWG N GQ+G V G+L P + D+ V
Sbjct: 87 AGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDW-------VA 139
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
V+ G + L D +LW G N + +L G VS+
Sbjct: 140 VSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSR 175
Score = 135 (52.6 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 45/148 (30%), Positives = 63/148 (42%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G ++ G VF WG GQLG + G A + LGV GG
Sbjct: 352 IAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGV---EPGGA 408
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
S +G L+AWG N GQ+G + P P+ + N + A G+ H
Sbjct: 409 FSLGLRSNGTLWAWGGNASGQLGDGTTTPSAI--PVPVVGG----AGNWRTT--ATGTAH 460
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVS 181
++A+ D +LW G N QL +G V+
Sbjct: 461 SVAVRADGTLWAWGDNSSGQLGIGSTVA 488
Score = 38 (18.4 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 197 NCPIVKLFAEHW---NSARLSVPEHAKDSSIVKL 227
+C +V FA SA L +P + DS+ +++
Sbjct: 1787 SCTVVVTFAPTGAGVKSAELKIPSNDPDSNDIEV 1820
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 202 (76.2 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 57/166 (34%), Positives = 80/166 (48%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G DH L+L +G +++WG S GQLG + T A P ++ G+ V ++AG
Sbjct: 630 IAAGQDHGLSLQADGTLWAWGANSVGQLG--NGVTTATFTPVQVINAEGVPYVSLAAGTS 687
Query: 94 HSAARTQDGFLYAWGWNNGGQVGV---EGKLDLVVHDPHPMSWSEDFDSQNIKVVD---V 147
HS A DG L+AWG N GQ+G G D + PH + + S + D V
Sbjct: 688 HSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVP-ARILTSNPVSAADDWLV 746
Query: 148 A-CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
A G H+ AL + +LW G N QL G ++ + T L P
Sbjct: 747 ATAGGSHSAALKSNGTLWTWGQNTSGQLGNGT-TTEADIPTALLEP 791
Score = 180 (68.4 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 50/146 (34%), Positives = 74/146 (50%)
Query: 44 LTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA--LSGLGVVQISAGGWHSAARTQD 101
L +G ++SWGN G+LG T + +P ++ A LS V ++AGG H+ A D
Sbjct: 150 LKGDGTLWSWGNNLFGELG--DGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQAD 207
Query: 102 GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDN 161
G L+AWG N GQ+G G ++ +P P+ D D I + G H++AL D
Sbjct: 208 GTLWAWGANLTGQLGTGGTG--ILPNPTPLKIGTDRDWTAI-----SAGEMHSVALKADG 260
Query: 162 SLWGCGWNEYNQLSMGCGVSQVSVMT 187
SLW G N + +L G + +V T
Sbjct: 261 SLWSWGQNLFGELGNGVALPGANVTT 286
Score = 179 (68.1 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 52/145 (35%), Positives = 71/145 (48%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPREIRALSGLGVVQISAGG 92
+A G H L + +G +++WG+ GQLG P +G A + IR +G V +SAG
Sbjct: 85 VAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGE 144
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
S DG L++WG N G++G +G V P P+ D N + V VA G
Sbjct: 145 LTSFGLKGDGTLWSWGNNLFGELG-DGT---TVSRPQPVQVVAD-PLSNGRYVAVAAGGE 199
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
H LAL D +LW G N QL G
Sbjct: 200 HALALQADGTLWAWGANLTGQLGTG 224
Score = 165 (63.1 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 47/141 (33%), Positives = 68/141 (48%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW-HSAARTQ 100
L L G +++WG + GQLG T + P + + G G + +A G HS A
Sbjct: 411 LGLRSNGTLWAWGGNASGQLG--DGTTTPSAIP--VPVVGGAGNWRTTATGTAHSVAVRA 466
Query: 101 DGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
DG L+AWG N+ GQ+G+ G + P ++ + + N VA G H+L L D
Sbjct: 467 DGTLWAWGDNSSGQLGI-GST-VAASTPQQITVTNPASAGNDWTA-VAGGGAHSLGLKAD 523
Query: 161 NSLWGCGWNEYNQLSMGCGVS 181
+LW G N + QL G G S
Sbjct: 524 GTLWSWGDNTFGQLGDGTGTS 544
Score = 160 (61.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 55/181 (30%), Positives = 86/181 (47%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR----ALSGLGVVQISA 90
A G H +A+ +G +++WG+ S GQLG S T A P++I A +G ++
Sbjct: 455 ATGTAHSVAVRADGTLWAWGDNSSGQLGIGS--TVAASTPQQITVTNPASAGNDWTAVAG 512
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE--DFDSQNIKVVDVA 148
GG HS DG L++WG N GQ+G +G P + +FD +N V VA
Sbjct: 513 GGAHSLGLKADGTLWSWGDNTFGQLG-DGTGTSNRTTPVQIVTGNPGNFD-RNW--VAVA 568
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC-PIVKLFAEH 207
G +LAL D ++W W + + L +G + ++ T+ +VP + P F
Sbjct: 569 AGGVFSLALQADGTIWT--WGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSS 626
Query: 208 W 208
W
Sbjct: 627 W 627
Score = 155 (59.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 51/166 (30%), Positives = 78/166 (46%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+A G +H LAL +G +++WG GQLG + GT P ++ + ISAG
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLG--TGGTGILPNPTPLKIGTDRDWTAISAGEM 251
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSEDFDSQNIKVVDVACGSR 152
HS A DG L++WG N G++G L V P + D+ V +A G+
Sbjct: 252 HSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDW-------VAIAAGAL 304
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCG-VSQVSVMTRLSVPEHVKN 197
HT+AL + ++ W Q ++G G V+ S T + P + N
Sbjct: 305 HTVALHRNGTV--SAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVN 348
Score = 155 (59.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 58/182 (31%), Positives = 82/182 (45%)
Query: 32 TDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RALSG---LGVVQ 87
T +A G H L L +G ++SWG+ + GQLG +GT P +I G V
Sbjct: 508 TAVAGGGAHSLGLKADGTLWSWGDNTFGQLG-DGTGTSNRTTPVQIVTGNPGNFDRNWVA 566
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLVVHDPHPMSW---SEDFDSQNIK 143
++AGG S A DG ++ WG N+ Q+G + L P S + N
Sbjct: 567 VAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSS 626
Query: 144 VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKL 203
V +A G H L+L D +LW G N QL G GV+ + T + V + + P V L
Sbjct: 627 WVAIAAGQDHGLSLQADGTLWAWGANSVGQL--GNGVT-TATFTPVQVI-NAEGVPYVSL 682
Query: 204 FA 205
A
Sbjct: 683 AA 684
Score = 148 (57.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 48/153 (31%), Positives = 72/153 (47%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGY-PSSGTDANME--PREIRALSGLGV----- 85
+A G LAL +G +++WG+ S QLG P+ T A P ++ S
Sbjct: 567 VAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSS 626
Query: 86 -VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V I+AG H + DG L+AWG N+ GQ+G G + P + +++ +
Sbjct: 627 WVAIAAGQDHGLSLQADGTLWAWGANSVGQLG-NG-VTTATFTPVQV-----INAEGVPY 679
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V +A G+ H+LA D +LW G N QL G
Sbjct: 680 VSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTG 712
Score = 139 (54.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 49/156 (31%), Positives = 71/156 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREIRALSGLGVVQIS 89
V +A G +H L L +G +++ G+ GQLG GT N P ++ G ++
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLG---DGTGINRTSPVQV---PGTWKT-VA 86
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
AG HS DG L+AWG N GQ+G V G+L P + D+ V
Sbjct: 87 AGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDW-------VA 139
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
V+ G + L D +LW G N + +L G VS+
Sbjct: 140 VSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSR 175
Score = 135 (52.6 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 45/148 (30%), Positives = 63/148 (42%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IA G ++ G VF WG GQLG + G A + LGV GG
Sbjct: 352 IAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGV---EPGGA 408
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
S +G L+AWG N GQ+G + P P+ + N + A G+ H
Sbjct: 409 FSLGLRSNGTLWAWGGNASGQLGDGTTTPSAI--PVPVVGG----AGNWRTT--ATGTAH 460
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVS 181
++A+ D +LW G N QL +G V+
Sbjct: 461 SVAVRADGTLWAWGDNSSGQLGIGSTVA 488
Score = 38 (18.4 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 197 NCPIVKLFAEHW---NSARLSVPEHAKDSSIVKL 227
+C +V FA SA L +P + DS+ +++
Sbjct: 1787 SCTVVVTFAPTGAGVKSAELKIPSNDPDSNDIEV 1820
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 204 (76.9 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 61/161 (37%), Positives = 84/161 (52%)
Query: 31 VTDIACGFDHCLALT--QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
+ I CG H LAL+ Q G +F+WG GQLG T P+ + LSG+ +VQI
Sbjct: 137 IIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPT-PQLVEHLSGVPLVQI 195
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
SAG HS A + G +Y+WG N+ GQ+G+ G + + P S E D+Q KV +A
Sbjct: 196 SAGKAHSMALSMSGNIYSWGRNDLGQLGL-GHTN---GEDFP-SLIEALDNQ--KVEFLA 248
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
CG HT L D ++ G +Y QL G +Q + RL
Sbjct: 249 CGGSHTALLTKDGLVFTFGAGKYGQL--GHNSTQNELRPRL 287
Score = 174 (66.3 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 53/178 (29%), Positives = 84/178 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-SSGTDANMEPREIR 78
P ++H + + I+ G H +AL+ G ++SWG GQLG ++G D P I
Sbjct: 181 PQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDF---PSLIE 237
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL V ++ GG H+A T+DG ++ +G GQ+G ++ P +E
Sbjct: 238 ALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNS----TQNELRPRLVTELAG 293
Query: 139 SQNIKVVDVACGSR-HTLALCDD-NSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEH 194
+ +V VACGSR HTLA D ++ G + QL G G + + +P +
Sbjct: 294 N---RVTQVACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNG-GTHNQLIPLPMKLPSN 347
Score = 166 (63.5 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 44/142 (30%), Positives = 79/142 (55%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ + V +ACG H LT++G+VF++G G GQLG+ S T + PR +
Sbjct: 233 PSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNS--TQNELRPRLVTE 290
Query: 80 LSGLGVVQISAGG-WHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED- 136
L+G V Q++ G WH+ A D G ++++G GQ+G G + ++ P + +E+
Sbjct: 291 LAGNRVTQVACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEEL 350
Query: 137 -FDSQNIK--VVDVACGSRHTL 155
F+S+ + ++ +A G++ L
Sbjct: 351 KFESRTSEKELIMIAGGNQSIL 372
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 192 (72.6 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 56/197 (28%), Positives = 94/197 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIR 78
P R+ + V A G H + LT++G V+S+G L + S + P
Sbjct: 32 PERLPGWTGKTVLQAALGVKHGVLLTEDGEVYSFGT-----LPWRSEPAELCPSSPILEN 86
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G VV ++ G +HS A T+ G +Y WG N+ GQ V + V +P+P+S S+
Sbjct: 87 ALVGQYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVANQQ--YVPEPNPVSISDSET 144
Query: 139 SQ--NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
S ++++ +ACG HTLAL +W W QL + ++ +T+ EH+
Sbjct: 145 SPLLAVRILQLACGEEHTLALSISREIWA--WGTGCQLGL---ITTTFPVTKPQKVEHLA 199
Query: 197 NCPIVKLFAEHWNSARL 213
++++ ++S L
Sbjct: 200 GRVVLQVACGAFHSLAL 216
Score = 134 (52.2 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 37/110 (33%), Positives = 55/110 (50%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V++WG G GQLG+ ++P ++ L G V+ + AGG+HS A T +Y+WG
Sbjct: 522 VWTWGKGKDGQLGH--GDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGS 579
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
N GQ+G D P + +S+N V VA G ++L L D
Sbjct: 580 NTFGQLGHS---DF----PTTVPRLAKMNSEN-GVWSVAAGQDYSLFLVD 621
Score = 108 (43.1 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
S L + + +ACG +H LAL+ +++WG G QLG ++ T +P+++ L
Sbjct: 142 SETSPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITT-TFPVTKPQKVEHL 198
Query: 81 SGLGVVQISAGGWHSAARTQ 100
+G V+Q++ G +HS A Q
Sbjct: 199 AGRVVLQVACGAFHSLALVQ 218
Score = 64 (27.6 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQ 46
P +++H VV +ACG H LAL Q
Sbjct: 192 PQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 56 (24.8 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
++ WG GQ+G G V+ P+ + D + +V+ + G H+LAL + +
Sbjct: 522 VWTWGKGKDGQLG-HGD---VLPRLQPLC-VKCLDGK--EVIHLEAGGYHSLALTAKSQV 574
Query: 164 WGCGWNEYNQL 174
+ G N + QL
Sbjct: 575 YSWGSNTFGQL 585
Score = 43 (20.2 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 204 FAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGILV 238
F++ W + I F+G W SGI V
Sbjct: 1219 FSDDWTLSGKGTLTMPNGDYIEGYFSGEWGSGIKV 1253
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 204 (76.9 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 69/223 (30%), Positives = 105/223 (47%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREI 77
+P ++ + L V +IACG H + +T++G FSWG S G+LG+ G D+N++ P+ I
Sbjct: 298 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGH---GVDSNIQQPKLI 354
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH-DPHPMSWSED 136
AL+ + ++ G +HS A T G LY WG G GV G + V H P ++
Sbjct: 355 DALNTTNIELVACGEFHSCAVTLSGDLYTWG---KGDFGVLGHGNEVSHWVPKRVN---- 407
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
F + I V +ACG HT + L+ G + L G + SV V + +K
Sbjct: 408 FLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHG---DKKSVFIPREV-DSLK 463
Query: 197 NCPIVKLFAEHWNSARL-SVPEHAKDSSIV---KLFAGHWNSG 235
V+ W++A + V + SS KLF W G
Sbjct: 464 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT--WGDG 504
Score = 145 (56.1 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 43/145 (29%), Positives = 67/145 (46%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG +ALT G V++ G+ GQLG +S D R L V +I+ G +
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLG--NSHADGKTPNRVEGKLHKSFVEEIACGAY 591
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H A T +Y WG + G++G G +D D + + E + +K +ACG+
Sbjct: 592 HVAVLTSRTEVYTWGKGSNGRLG-HGDVD----DRNSPTLVESLKDKQVK--SIACGTNF 644
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGC 178
T A+C W G ++ + GC
Sbjct: 645 TAAVCIHR--WASGMDQ--SMCSGC 665
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 42/142 (29%), Positives = 68/142 (47%)
Query: 48 GIVFSWGNG-SRGQLGYPS----SGTDANME---PREIRALSGLGVVQISAGGWHSAART 99
G VF WG G G LG + S D M+ P+ + + L V I+ GG H+ T
Sbjct: 265 GDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 324
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
+ G ++WG + G++G G +D + P + + ++ NI++V ACG H+ A+
Sbjct: 325 KQGESFSWGEESEGRLG-HG-VDSNIQQPKLI---DALNTTNIELV--ACGEFHSCAVTL 377
Query: 160 DNSLWGCGWNEYNQLSMGCGVS 181
L+ G ++ L G VS
Sbjct: 378 SGDLYTWGKGDFGVLGHGNEVS 399
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 195 (73.7 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 58/185 (31%), Positives = 94/185 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
++ +ACG H +ALT G VF+WG GS GQLG+ G N+ ++ + V+ +A
Sbjct: 50 ISMLACGGAHVIALTSGGKVFTWGRGSSGQLGH---GDILNITLPKLVSFFDDSVITQAA 106
Query: 91 GGW-HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
GW HS + G ++ G + GQ+G L L P +S F++ ++K+V AC
Sbjct: 107 AGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLST--PAKVS---HFNNDSVKMV--AC 159
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWN 209
G RH+L L N + G G + QL G ++ + V +K+ +V++ A +
Sbjct: 160 GMRHSLVLFAGNQVCGFGSGKRGQL--GFSSDRIKSVNLPCVVSGLKDVEVVRISANGDH 217
Query: 210 SARLS 214
SA +S
Sbjct: 218 SAAIS 222
Score = 166 (63.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 50/148 (33%), Positives = 69/148 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+++ HF + V +ACG H L L V +G+G RGQLG+ S + P +
Sbjct: 143 PAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSG 202
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L + VV+ISA G HSAA + DG ++WG G V L P P+S+ E
Sbjct: 203 LKDVEVVRISANGDHSAAISADGQFFSWGRGFCGGPDVHAPQSL----PSPLSFRE---- 254
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCG 167
VA G H L L D ++ G
Sbjct: 255 -------VAVGWNHALLLTVDGEVFKLG 275
Score = 150 (57.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 47/142 (33%), Positives = 69/142 (48%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE- 76
H P + L ++A G++H L LT +G VF G+ Q D++ E
Sbjct: 241 HAPQSLPSPLSF--REVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEK 298
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-SE 135
+ G+ V+QI+AG HSAA T++G + WGW GQ+G+ D P +S S
Sbjct: 299 VPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQT--SPELVSLGSI 356
Query: 136 DFDSQNIKVVDVACGSRHTLAL 157
D ++ IKV CGS T A+
Sbjct: 357 DLRTKEIKVY---CGSGFTYAV 375
Score = 136 (52.9 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 45/168 (26%), Positives = 75/168 (44%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++P + D+ V I+ DH A++ +G FSWG G G G D + P+ +
Sbjct: 195 NLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCG-------GPDVHA-PQSL 246
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS-ED 136
S L +++ G H+ T DG ++ G Q K L + + D
Sbjct: 247 P--SPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQ---PEKQQLQIDSSEALFEKVPD 301
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
FD +KV+ +A G+ H+ A+ ++ + GW E+ QL +G Q S
Sbjct: 302 FDG--VKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTS 347
Score = 133 (51.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 44/160 (27%), Positives = 78/160 (48%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLY 105
+E V+SWG G+ GQLG ++ + P+ + S + ++ GG H A T G ++
Sbjct: 13 EEEQVWSWGAGTDGQLG--TTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVF 70
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
WG + GQ+G L++ + P +S+ +D ++ + A G H+ + D ++
Sbjct: 71 TWGRGSSGQLGHGDILNITL--PKLVSFFDD----SV-ITQAAAGWSHSGFVSDSGCIFT 123
Query: 166 CGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
CG + QL G +S +S ++S H N VK+ A
Sbjct: 124 CGNGSFGQLGHGDTLS-LSTPAKVS---HFNN-DSVKMVA 158
Score = 131 (51.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 40/152 (26%), Positives = 68/152 (44%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P + F D V+T A G+ H ++ G +F+ GNGS GQLG+ T + P ++
Sbjct: 90 LPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH--GDTLSLSTPAKVS 147
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+ V ++ G HS + +G GQ+G V+ P +S +D
Sbjct: 148 HFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKD-- 205
Query: 139 SQNIKVVDVACGSRHTLALCDDNSL--WGCGW 168
++VV ++ H+ A+ D WG G+
Sbjct: 206 ---VEVVRISANGDHSAAISADGQFFSWGRGF 234
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 205 (77.2 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 41/153 (26%), Positives = 79/153 (51%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++CG + +T +G++F++G G G+LG P+ +++L G ++ +S+
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSS 399
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW---SEDFDSQNIKVVDV 147
GG HS T G ++++G N+ GQ+G+ G P + W S+ Q I ++ V
Sbjct: 400 GGGHSLVLTNKGLVFSFGRNDQGQLGI-GCFSNQQTIPKQIQWFQTSQQQQQQPINIIKV 458
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
+ G H++A+ D+N + G ++Y L V
Sbjct: 459 SAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDV 491
Score = 188 (71.2 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 57/182 (31%), Positives = 91/182 (50%)
Query: 3 DH--LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQ 60
DH L G +L Q P + + D++ G H L LT +G+VFS+G +GQ
Sbjct: 366 DHGRLGLGEQSLLMQ--STPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQ 423
Query: 61 LGYPSSGTDANME--PREIRALSG--------LGVVQISAGGWHSAARTQDGFLYAWGWN 110
LG G +N + P++I+ + ++++SAGG+HS A + + YAWG +
Sbjct: 424 LGI---GCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRS 480
Query: 111 NGGQVG----VEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--W 164
+ G +G V+G +L V + S N+K +DV+ G +H +A+ D SL W
Sbjct: 481 DYGVLGTSIDVQGDRNLPV-----LINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSW 535
Query: 165 GC 166
GC
Sbjct: 536 GC 537
Score = 116 (45.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 31/110 (28%), Positives = 60/110 (54%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RALSGLGVVQISAGG 92
I+ G H +T +G ++++G+G G+LG+ + + ++ + E + L VV I+ GG
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGG 252
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSEDFDSQN 141
HS A T G +Y+WG N+ Q+G+ G P ++++ +++ N
Sbjct: 253 KHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNN 302
Score = 107 (42.7 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 33/135 (24%), Positives = 68/135 (50%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
+V++S G SA T G L+ +G + G++G+ G+ L++ + S Q +
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGL-GEQSLLMQSTPKLVQS----LQGHFI 394
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS---VPEHVKNCPI- 200
+D++ G H+L L + ++ G N+ QL +GC +Q ++ ++ + + PI
Sbjct: 395 IDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPIN 454
Query: 201 -VKLFAEHWNSARLS 214
+K+ A ++S +S
Sbjct: 455 IIKVSAGGYHSIAIS 469
Score = 71 (30.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 18/34 (52%), Positives = 19/34 (55%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
L V IA G H LALT G V+SWG QLG
Sbjct: 243 LRVVSIANGGKHSLALTICGKVYSWGGNDSCQLG 276
Score = 64 (27.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 132 SWSEDFDSQN--IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
S S++ S N IK+V ++CG+ + + D L+ G ++ +L +G
Sbjct: 326 SLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLG 373
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 202 (76.2 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 58/144 (40%), Positives = 80/144 (55%)
Query: 37 GFD-HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA-LSGLGVVQISAGGWH 94
G D H LA T EG VFSWG+G G+LG+ +S T P+ I+ L G VV +SAG H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRH 522
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
SAA T+DG LY WG + G++G G + + P + D N+ +V+CGS HT
Sbjct: 523 SAAVTEDGELYTWGEGDFGRLG-HGDSNSR-NIPTLVK-----DISNVG--EVSCGSSHT 573
Query: 155 LALCDDN-SLWGCGWNEYNQLSMG 177
+AL D ++W G + +L G
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHG 597
Score = 185 (70.2 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 48/161 (29%), Positives = 83/161 (51%)
Query: 31 VTDIACGFDHCLALTQEG-IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V +++CG H +AL+++G V+S+G G G+LG+ T+ +P+ I AL G+ + ++
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH--GDTNRVYKPKVIEALQGMFIRKVC 620
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG S A T G +YAWG G +G G + P + E+ + ++VD++
Sbjct: 621 AGSQSSLALTSTGQVYAWGC--GACLGC-GSSEATALRPKLI---EELAAT--RIVDISI 672
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
G H L+L DN ++ G N Q G ++ ++S
Sbjct: 673 GDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 163 (62.4 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 45/160 (28%), Positives = 86/160 (53%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
VV ++ G+ H A+T++G +++WG G G+LG+ S + N+ P ++ +S +G ++S
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS-RNI-PTLVKDISNVG--EVS 567
Query: 90 AGGWHSAARTQDG-FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G H+ A ++DG ++++G + G++G G + V + P + Q + + V
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRV-YKPKVIE-----ALQGMFIRKVC 620
Query: 149 CGSRHTLALCDDNSL--WGCGWNEYNQLSMGCGVSQVSVM 186
GS+ +LAL + WGCG +GCG S+ + +
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG------ACLGCGSSEATAL 654
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + DI+ G HCL+L+ + V++WGN S GQ G +S T +P+++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNS-TGPITKPKKVSG 714
Query: 80 LSGLGVVQISAGGWHSAART---QDGFLYAW 107
L G+ + QISAG HS A T +D + AW
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 145 (56.1 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 41/139 (29%), Positives = 67/139 (48%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+ P ++ + + + G LALT G V++WG G+ LG SS A + P+ I
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATA-LRPKLI 659
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ +V IS G H + + D +YAWG N+ GQ G +G + P +S +
Sbjct: 660 EELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLD-- 716
Query: 138 DSQNIKVVDVACGSRHTLA 156
I + ++ G+ H+LA
Sbjct: 717 ---GIAIQQISAGTSHSLA 732
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 198 (74.8 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 57/159 (35%), Positives = 80/159 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ I CG H LAL++ G +F+WG GQLG + P + LSG+ +VQISA
Sbjct: 150 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTST-PEIVENLSGVPLVQISA 208
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS A + G +Y+WG N+ GQ+G+ G ++ S E D Q KV +ACG
Sbjct: 209 GEAHSMALSMSGNVYSWGRNDCGQLGL-GH----TYNKESPSCIEALDDQ--KVEFLACG 261
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
HT L ++ G +Y QL G +Q + RL
Sbjct: 262 GCHTALLTKSGLVFTFGDGKYGQL--GHNSTQNELRPRL 298
Score = 170 (64.9 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 49/149 (32%), Positives = 81/149 (54%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PS ++ D V +ACG H LT+ G+VF++G+G GQLG+ S T + PR +
Sbjct: 244 PSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNS--TQNELRPRLVTG 301
Query: 80 LSGLGVVQISAGGWHSAARTQD-GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L G V QI+ G H+ A D G ++++G GQ+G G + ++ P + SE+
Sbjct: 302 LVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELK 361
Query: 139 SQN---IK-VVDVACGSRHTLALCD-DNS 162
S++ +K ++ VA G++ L + +NS
Sbjct: 362 SESSTSVKELIMVAGGNQSILIWMEKENS 390
Score = 153 (58.9 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 47/160 (29%), Positives = 75/160 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P +++ + + I+ G H +AL+ G V+SWG GQLG G N E P I
Sbjct: 192 PEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGL---GHTYNKESPSCIE 248
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL V ++ GG H+A T+ G ++ +G GQ+G ++ P +
Sbjct: 249 ALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNS----TQNELRPRLVTGLVG 304
Query: 139 SQNIKVVDVACGSRHTLA-LCDDNSLWGCGWNEYNQLSMG 177
+ +V +ACG +HTLA + D ++ G + QL G
Sbjct: 305 N---RVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNG 341
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 188 (71.2 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 56/197 (28%), Positives = 92/197 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIR 78
P R+ + V A G H + LT++G V+S+G L + S + P
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGT-----LPWKSEAAEICPSSPLLES 86
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G VV ++ G +HS A T+ G +Y WG N GQ V + V +P P+S S+
Sbjct: 87 ALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQ--YVSEPSPVSISDSET 144
Query: 139 SQ--NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
S ++++ +ACG HTLAL +W W QL + ++ +T+ EH+
Sbjct: 145 SPLLAVRILQLACGEEHTLALSISREIWA--WGTGCQLGL---ITTTFPVTKPQKVEHLA 199
Query: 197 NCPIVKLFAEHWNSARL 213
++++ ++S L
Sbjct: 200 GRVVLQVACGAFHSLAL 216
Score = 130 (50.8 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V++WG G GQLG+ ++P ++ L G V+ + AGG HS A T +Y+WG
Sbjct: 522 VWTWGKGKEGQLGH--GDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGS 579
Query: 110 NNGGQVG 116
N GQ+G
Sbjct: 580 NTFGQLG 586
Score = 108 (43.1 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
S L + + +ACG +H LAL+ +++WG G QLG ++ T +P+++ L
Sbjct: 142 SETSPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITT-TFPVTKPQKVEHL 198
Query: 81 SGLGVVQISAGGWHSAARTQ 100
+G V+Q++ G +HS A Q
Sbjct: 199 AGRVVLQVACGAFHSLALVQ 218
Score = 64 (27.6 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQ 46
P +++H VV +ACG H LAL Q
Sbjct: 192 PQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 56 (24.8 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
W W G + G G D V+ P+ + D + +V+ + G H+LAL + ++
Sbjct: 523 WTWGKGKE-GQLGHGD-VLPRLQPLC-VKCLDGK--EVIHLEAGGSHSLALTAKSQVYSW 577
Query: 167 GWNEYNQL 174
G N + QL
Sbjct: 578 GSNTFGQL 585
Score = 41 (19.5 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 9/35 (25%), Positives = 13/35 (37%)
Query: 204 FAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGILV 238
F++ W I F+G W SGI +
Sbjct: 1219 FSDDWTLCGKGTLTMPNGDYIEGYFSGEWGSGIKI 1253
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 187 (70.9 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 55/197 (27%), Positives = 93/197 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIR 78
P R+ + V A G H + LT++G V+S+G L + S + P
Sbjct: 32 PERLPGWGGKTVLQAALGVRHGVLLTEDGEVYSFGT-----LPWKSESAEICPSSPLLES 86
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G V+ ++ G +HS A T+ G +Y WG N GQ V + V +P P+S S+
Sbjct: 87 ALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQ--YVPEPSPVSISDSET 144
Query: 139 SQN--IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
S + ++++ +ACG HTLAL +W W QL + ++ +T+ EH+
Sbjct: 145 SPSLAVRILQLACGEEHTLALSLSREIWA--WGTGCQLGL---ITTTFPVTKPQKVEHLA 199
Query: 197 NCPIVKLFAEHWNSARL 213
++++ ++S L
Sbjct: 200 GRVVLQVACGAFHSLAL 216
Score = 130 (50.8 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V++WG G GQLG+ ++P ++ L G V+ + AGG HS A T +Y+WG
Sbjct: 522 VWTWGKGKEGQLGH--GDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGS 579
Query: 110 NNGGQVG 116
N GQ+G
Sbjct: 580 NTFGQLG 586
Score = 108 (43.1 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG +H LAL+ +++WG G QLG ++ T +P+++ L+G V+Q++
Sbjct: 152 ILQLACGEEHTLALSLSREIWAWGTGC--QLGLITT-TFPVTKPQKVEHLAGRVVLQVAC 208
Query: 91 GGWHSAARTQ 100
G +HS A Q
Sbjct: 209 GAFHSLALVQ 218
Score = 64 (27.6 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQ 46
P +++H VV +ACG H LAL Q
Sbjct: 192 PQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 56 (24.8 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
W W G + G G D V+ P+ + D + +V+ + G H+LAL + ++
Sbjct: 523 WTWGKGKE-GQLGHGD-VLPRLQPLC-VKCLDGK--EVIHLEAGGSHSLALTAKSQVYSW 577
Query: 167 GWNEYNQL 174
G N + QL
Sbjct: 578 GSNTFGQL 585
Score = 42 (19.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 204 FAEHWN-SAR--LSVPEHAKDSSIVKLFAGHWNSGILV 238
F++ W S + L++P H I F+G W SGI +
Sbjct: 1219 FSDDWTLSGKGTLTMP-HG--DYIEGYFSGEWGSGIKI 1253
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 183 (69.5 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 55/197 (27%), Positives = 94/197 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P R+ + V A G H + LT++G V+S+G L + S + P
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGT-----LPWRSEPAEICPSCPILEN 86
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G VV +++G +H+ A T+ G Y WG N+ GQ V + V +P+P+S S+
Sbjct: 87 ALIGQFVVTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQ--YVPEPNPVSISDSET 144
Query: 139 SQ--NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
S ++++ +ACG HTLAL +W W QL + ++ +T+ EH+
Sbjct: 145 SSLLAVRILQLACGEEHTLALSISREIWA--WGTGCQLGL---ITTTFPVTKPQKVEHLA 199
Query: 197 NCPIVKLFAEHWNSARL 213
++++ ++S L
Sbjct: 200 GRVVLQVACGAFHSLAL 216
Score = 135 (52.6 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 38/110 (34%), Positives = 54/110 (49%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V++WG G GQLG+ ++P ++ L G V+ + AGG+HS A T +Y+WG
Sbjct: 527 VWTWGKGKEGQLGH--GDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGS 584
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
N GQ+G D P S S+N V VA G ++L L D
Sbjct: 585 NTFGQLG---HYDFPTTVPRLAKVS----SEN-GVWSVAAGQDYSLFLVD 626
Score = 109 (43.4 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
S L + + +ACG +H LAL+ +++WG G QLG ++ T +P+++ L
Sbjct: 142 SETSSLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITT-TFPVTKPQKVEHL 198
Query: 81 SGLGVVQISAGGWHSAARTQ 100
+G V+Q++ G +HS A Q
Sbjct: 199 AGRVVLQVACGAFHSLALVQ 218
Score = 64 (27.6 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQ 46
P +++H VV +ACG H LAL Q
Sbjct: 192 PQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 53 (23.7 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
W W G + G G D V+ P+ + D + +V+ + G H+LAL + ++
Sbjct: 528 WTWGKGKE-GQLGHGD-VLPRLQPLC-VKCLDGK--EVIYLEAGGYHSLALTAKSQVYSW 582
Query: 167 GWNEYNQL 174
G N + QL
Sbjct: 583 GSNTFGQL 590
Score = 42 (19.8 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 204 FAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGILV 238
F++ W + I F+G W SGI +
Sbjct: 1224 FSDDWTLSGKGTLTMPNGDYIEGYFSGEWGSGIKI 1258
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 182 (69.1 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 55/197 (27%), Positives = 93/197 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIR 78
P R+ + V A G H + LT++G V+S+G L + S + P
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGT-----LPWRSGPVEICPSSPILEN 86
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G VV ++ G +HS A T +G Y WG N+ GQ V + V +P+P+S ++
Sbjct: 87 ALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQ--YVPEPNPVSIADSEA 144
Query: 139 SQ--NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
S ++++ +ACG HTLAL +W W QL + ++ +T+ EH+
Sbjct: 145 SPLLAVRILQLACGEEHTLALSISREIWA--WGTGCQLGL---ITTAFPVTKPQKVEHLA 199
Query: 197 NCPIVKLFAEHWNSARL 213
++++ ++S L
Sbjct: 200 GRVVLQVACGAFHSLAL 216
Score = 135 (52.6 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V++WG G GQLG+ ++P ++ L G V+ + AGG+HS A T +Y+WG
Sbjct: 528 VWTWGKGKEGQLGH--GDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGS 585
Query: 110 NNGGQVG 116
N GQ+G
Sbjct: 586 NTFGQLG 592
Score = 108 (43.1 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
S L + + +ACG +H LAL+ +++WG G QLG ++ +P+++ L
Sbjct: 142 SEASPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVT-KPQKVEHL 198
Query: 81 SGLGVVQISAGGWHSAARTQ 100
+G V+Q++ G +HS A Q
Sbjct: 199 AGRVVLQVACGAFHSLALVQ 218
Score = 64 (27.6 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQ 46
P +++H VV +ACG H LAL Q
Sbjct: 192 PQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 55 (24.4 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
W W G + G G D V+ P+ + D + +V+ + G H+LAL + ++
Sbjct: 529 WTWGKGKE-GQLGHGD-VLPRLQPLC-VKCLDGK--EVIHLEAGGYHSLALTAKSQVYSW 583
Query: 167 GWNEYNQL 174
G N + QL
Sbjct: 584 GSNTFGQL 591
Score = 42 (19.8 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 204 FAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGILV 238
F++ W + I F+G W SGI +
Sbjct: 1225 FSDDWTLSGKGTLTMPNGDYIEGYFSGEWGSGIKI 1259
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 190 (71.9 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 51/164 (31%), Positives = 84/164 (51%)
Query: 20 PSRMDHFLD----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P + FL+ + + +ACG LT GI+ ++G+GS G LG+ S TD + +P
Sbjct: 384 PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSL-TDIS-QPT 441
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD-PHPMSWS 134
+ AL G +VQ++ G H A + DG L+AWG +GG++G+ G + H+ P +
Sbjct: 442 IVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGL-GTRES--HNCPQQVPMV 498
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
++Q V CG ++ L + CG N +N+L + C
Sbjct: 499 PGQEAQR-----VVCGIDCSMILTSPGRVLACGSNRFNKLGLDC 537
Score = 115 (45.5 bits), Expect = 0.00066, P = 0.00066
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L+ D+ G H A+T G +++G+ GQLG +S + P ++ L G+ +V +
Sbjct: 569 LLCVDL--GTAHSAAVTASGACYTFGSNQHGQLG--TSSRRVSRAPCRVQGLEGIKMVMV 624
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G + A +G +Y+WG G++G + D P P+ E + V V+
Sbjct: 625 ACGDAFTVAIGAEGEVYSWGKGARGRLG---RRDEDAGLPRPVQLDE---THPYTVTSVS 678
Query: 149 CGSRHTL 155
C +TL
Sbjct: 679 CCHGNTL 685
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 181 (68.8 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 54/197 (27%), Positives = 93/197 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIR 78
P R+ + V A G H + LT++G V+S+G L + S + P
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGT-----LPWRSGPVEICPSSPILEN 86
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
AL G V+ ++ G +HS A T +G Y WG N+ GQ V + V +P+P+S ++
Sbjct: 87 ALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQ--YVPEPNPVSIADSEA 144
Query: 139 SQ--NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
S ++++ +ACG HTLAL +W W QL + ++ +T+ EH+
Sbjct: 145 SPLLAVRILQLACGEEHTLALSISREIWA--WGTGCQLGL---ITTAFPVTKPQKVEHLA 199
Query: 197 NCPIVKLFAEHWNSARL 213
++++ ++S L
Sbjct: 200 GRVVLQVACGAFHSLAL 216
Score = 135 (52.6 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V++WG G GQLG+ ++P ++ L G V+ + AGG+HS A T +Y+WG
Sbjct: 528 VWTWGKGKEGQLGH--GDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGS 585
Query: 110 NNGGQVG 116
N GQ+G
Sbjct: 586 NTFGQLG 592
Score = 108 (43.1 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
S L + + +ACG +H LAL+ +++WG G QLG ++ +P+++ L
Sbjct: 142 SEASPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVT-KPQKVEHL 198
Query: 81 SGLGVVQISAGGWHSAARTQ 100
+G V+Q++ G +HS A Q
Sbjct: 199 AGRVVLQVACGAFHSLALVQ 218
Score = 64 (27.6 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQ 46
P +++H VV +ACG H LAL Q
Sbjct: 192 PQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 55 (24.4 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
W W G + G G D V+ P+ + D + +V+ + G H+LAL + ++
Sbjct: 529 WTWGKGKE-GQLGHGD-VLPRLQPLC-VKCLDGK--EVIHLEAGGYHSLALTAKSQVYSW 583
Query: 167 GWNEYNQL 174
G N + QL
Sbjct: 584 GSNTFGQL 591
Score = 42 (19.8 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 204 FAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGILV 238
F++ W + I F+G W SGI +
Sbjct: 1225 FSDDWTLSGKGTLTMPNGDYIEGYFSGEWGSGIKI 1259
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 192 (72.6 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 57/172 (33%), Positives = 85/172 (49%)
Query: 2 CDHLASGPLKM-LSQ-VFHMPSRM---DHFLD-LVVTDIACGFDHCLALTQEGIVFSWGN 55
C H G L + LS+ +P R+ + +D VT + CG H + LT++G ++S G+
Sbjct: 8 CGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGS 67
Query: 56 GSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
GQLG S T+ + + S ++QISAG H+ + T DG ++AWG N GQ+
Sbjct: 68 NMDGQLGR-GSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQL 126
Query: 116 GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WG 165
G+E K P E D +V VA GS H +AL + + WG
Sbjct: 127 GMESKF---TWQGTPRRVQEIND-----IVQVASGSNHCIALDEGGRVFVWG 170
Score = 181 (68.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 51/179 (28%), Positives = 82/179 (45%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ D+V +A G +HC+AL + G VF WG + G+ + P +
Sbjct: 138 PRRVQEINDIV--QVASGSNHCIALDEGGRVFVWGEQADGRCIH---------RPEPVEQ 186
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLVVHDPHPMSWSEDFD 138
LSG+ +V++ AG H A + G ++ WG NN G++G++ + V H M
Sbjct: 187 LSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMD------ 240
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS--VPEHV 195
+ VV+ ACG HT+ L + G + Q G V + + T +S + HV
Sbjct: 241 --GLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHV 297
Score = 177 (67.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 49/178 (27%), Positives = 85/178 (47%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H P ++ + + + G HCLAL+ G VF+WG + G+LG +++ +
Sbjct: 179 HRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQ--HV 236
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ GLGVV+ + G H+ T G +++G + GQ G K++ +P + S+
Sbjct: 237 HQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVE---KRTNPTAVSDLI 293
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
S V +A G+ HT+A+C + + G N QL G ++Q S + +HV
Sbjct: 294 GSH---VTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQ-STPRKTDELDHV 346
Score = 145 (56.1 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 37/126 (29%), Positives = 63/126 (50%)
Query: 54 GNGSRGQLGYPSSGTDANMEPREIRA---LSGLGVVQISAGGWHSAARTQDGFLYAWGWN 110
G+ GQLG S + + R I A + G V ++ G H+ T+DG +++ G N
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSN 68
Query: 111 NGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
GQ+G G +P+SW+ + K++ ++ G HT+++ DD ++ G NE
Sbjct: 69 MDGQLG-RGSRTEGSFSIYPVSWTS-----SAKIIQISAGRSHTVSVTDDGRVFAWGSNE 122
Query: 171 YNQLSM 176
+ QL M
Sbjct: 123 HGQLGM 128
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 192 (72.6 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 57/172 (33%), Positives = 85/172 (49%)
Query: 2 CDHLASGPLKM-LSQ-VFHMPSRM---DHFLD-LVVTDIACGFDHCLALTQEGIVFSWGN 55
C H G L + LS+ +P R+ + +D VT + CG H + LT++G ++S G+
Sbjct: 8 CGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGS 67
Query: 56 GSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQV 115
GQLG S T+ + + S ++QISAG H+ + T DG ++AWG N GQ+
Sbjct: 68 NMDGQLGR-GSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQL 126
Query: 116 GVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WG 165
G+E K P E D +V VA GS H +AL + + WG
Sbjct: 127 GMESKF---TWQGTPRRVQEIND-----IVQVASGSNHCIALDEGGRVFVWG 170
Score = 181 (68.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 51/179 (28%), Positives = 82/179 (45%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ D+V +A G +HC+AL + G VF WG + G+ + P +
Sbjct: 138 PRRVQEINDIV--QVASGSNHCIALDEGGRVFVWGEQADGRCIH---------RPEPVEQ 186
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLVVHDPHPMSWSEDFD 138
LSG+ +V++ AG H A + G ++ WG NN G++G++ + V H M
Sbjct: 187 LSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMD------ 240
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS--VPEHV 195
+ VV+ ACG HT+ L + G + Q G V + + T +S + HV
Sbjct: 241 --GLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHV 297
Score = 177 (67.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 49/178 (27%), Positives = 85/178 (47%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H P ++ + + + G HCLAL+ G VF+WG + G+LG +++ +
Sbjct: 179 HRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQ--HV 236
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ GLGVV+ + G H+ T G +++G + GQ G K++ +P + S+
Sbjct: 237 HQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVE---KRTNPTAVSDLI 293
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
S V +A G+ HT+A+C + + G N QL G ++Q S + +HV
Sbjct: 294 GSH---VTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQ-STPRKTDELDHV 346
Score = 145 (56.1 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 37/126 (29%), Positives = 63/126 (50%)
Query: 54 GNGSRGQLGYPSSGTDANMEPREIRA---LSGLGVVQISAGGWHSAARTQDGFLYAWGWN 110
G+ GQLG S + + R I A + G V ++ G H+ T+DG +++ G N
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSN 68
Query: 111 NGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNE 170
GQ+G G +P+SW+ + K++ ++ G HT+++ DD ++ G NE
Sbjct: 69 MDGQLG-RGSRTEGSFSIYPVSWTS-----SAKIIQISAGRSHTVSVTDDGRVFAWGSNE 122
Query: 171 YNQLSM 176
+ QL M
Sbjct: 123 HGQLGM 128
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 193 (73.0 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 56/164 (34%), Positives = 89/164 (54%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN-MEPREIRALSGLGVVQISAGG 92
+A G + ALTQ+G ++ WG+ S GQ+G G ++N + P+E+ G V +S G
Sbjct: 146 LAAGSNTSAALTQDGRLYMWGDNSEGQIGL---GKESNALTPQEVSV--GKRVFWVSCGY 200
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
+HSA T DG LY +G + G++G+ + L H P ++ D +VV VACG
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-KLANHKV-PQQVTDIPD----RVVQVACGGG 254
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
HT+AL + N ++ G ++ QL G + + S + R V EH +
Sbjct: 255 HTVALTE-NEVYSFGLGQFGQLGHGTFIFE-SRLPR--VVEHFR 294
Score = 156 (60.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 49/145 (33%), Positives = 73/145 (50%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+CG +H +T+ G +F +G+ + GQLG + T N +P ++AL V + G
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTK-TTVN-KPTCVKALKSERVKLTACGRT 98
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN-IKVVDVACGSR 152
H+ T G LYA G NN GQ+G+ G + D E F+ Q IK++ A GS
Sbjct: 99 HTLVFTSRGNLYACGGNNEGQLGL-GDCN----DRTSFHLVEFFNKQGPIKML--AAGSN 151
Query: 153 HTLALCDDNSLWGCGWNEYNQLSMG 177
+ AL D L+ G N Q+ +G
Sbjct: 152 TSAALTQDGRLYMWGDNSEGQIGLG 176
Score = 151 (58.2 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 50/165 (30%), Positives = 76/165 (46%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
ACG H L T G +++ G + GQLG + E G + ++AG
Sbjct: 94 ACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQG-PIKMLAAGSNT 152
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHT 154
SAA TQDG LY WG N+ GQ+G+ GK + P +S + +V V+CG H+
Sbjct: 153 SAALTQDGRLYMWGDNSEGQIGL-GKESNAL-TPQEVSVGK-------RVFWVSCGYYHS 203
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
+ D +L+ G + +L G+S + VP+ V + P
Sbjct: 204 AFVTVDGALYTFGEKDSGKL----GLSTEKLANH-KVPQQVTDIP 243
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 38/144 (26%), Positives = 71/144 (49%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++CG+ H +T +G ++++G G+LG + + P+++ + VVQ++ GG
Sbjct: 196 VSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR-VVQVACGGG 254
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ A T++ +Y++G GQ+G G P + E F +K ACG H
Sbjct: 255 HTVALTENE-VYSFGLGQFGQLG-HGTFIFESRLPRVV---EHFRKGRVK--HAACGENH 307
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
T + D+ L+ G + +L +G
Sbjct: 308 TALITDNGLLYTFGDGRHGKLGLG 331
Score = 129 (50.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 32/92 (34%), Positives = 50/92 (54%)
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
++IS G H+A T++G L+ +G NN GQ+G+ K V+ P + + S+ +K+
Sbjct: 39 LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKT--TVNKP---TCVKALKSERVKLT 93
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
ACG HTL +L+ CG N QL +G
Sbjct: 94 --ACGRTHTLVFTSRGNLYACGGNNEGQLGLG 123
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 43/139 (30%), Positives = 66/139 (47%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ D VV +ACG H +ALT E V+S+G G GQLG+ + ++ + PR +
Sbjct: 235 VPQQVTDIPDRVV-QVACGGGHTVALT-ENEVYSFGLGQFGQLGHGTFIFESRL-PRVVE 291
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
V + G H+A T +G LY +G G++G+ G+ + + P D
Sbjct: 292 HFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGL-GEENFT-NQFKPTLCPRFLD 349
Query: 139 SQNIKVVDVACGSRHTLAL 157
V V CG H L L
Sbjct: 350 YH---VHSVTCGGCHMLVL 365
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 182 (69.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 57/176 (32%), Positives = 80/176 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR-ALSGLGVVQIS 89
V +A G H +AL G V++WG+ S GQL + PR++ A + I
Sbjct: 141 VQQVAAGGLHSMALAG-GTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIV 199
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AGG HS A T YAWG N GQ+G G L H P + +I + ++
Sbjct: 200 AGGSHSIAYTSTE-AYAWGNNASGQLG-NGTT-LSNHMPQKVQLPS-----SITIRKISA 251
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
G H LAL ++W G N Y QL G +Q S +L++P V + +FA
Sbjct: 252 GGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQ-STPVQLTLPAGVTG--FIDVFA 304
Score = 170 (64.9 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 48/159 (30%), Positives = 81/159 (50%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIRALSGLGV 85
L + T I G H +A T ++WGN + GQLG +GT +N P++++ S + +
Sbjct: 191 LPIAPTAIVAGGSHSIAYTSTE-AYAWGNNASGQLG---NGTTLSNHMPQKVQLPSSITI 246
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+ISAGG H+ A G ++AWG N GQ+G G + P+ + + +
Sbjct: 247 RKISAGGSHNLALDSTGAIWAWGSNAYGQLG-NGT---TTNQSTPVQLT--LPAGVTGFI 300
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
DV G H++A+ + +++ G+N LS+G Q+S
Sbjct: 301 DVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLS 339
Score = 169 (64.5 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 49/178 (27%), Positives = 87/178 (48%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
HMP ++ + + I+ G H LAL G +++WG+ + GQLG +GT N P +
Sbjct: 233 HMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLG---NGTTTNQSTPVQ 289
Query: 77 IRALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ +G+ G + + AG HS A + +Y WG+N G + V D + P + +
Sbjct: 290 LTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQL--SPAQVRDAS 347
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
+ +++ V V GS T+ + + +W G+N Y QL G S + ++++P
Sbjct: 348 NVPFTDVERV-VLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGT-TSNRTAPVQVALP 403
Score = 128 (50.1 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 35 ACGFDHCLALTQ-EGI--VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG 91
A G H LA+ + + + V +WG+ S GQ+G + + P +I G V Q++AG
Sbjct: 89 ATGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGG-AVQQVAAG 147
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
G HS A G ++AWG N+ GQ+ + P + ++ I + G
Sbjct: 148 GLHSMALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAK----LPIAPTAIVAGG 202
Query: 152 RHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
H++A + WG N QL G +S + ++ +P +
Sbjct: 203 SHSIAYTSTEAYAWGN--NASGQLGNGTTLSN-HMPQKVQLPSSI 244
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 182 (69.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 57/176 (32%), Positives = 80/176 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR-ALSGLGVVQIS 89
V +A G H +AL G V++WG+ S GQL + PR++ A + I
Sbjct: 141 VQQVAAGGLHSMALAG-GTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIV 199
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AGG HS A T YAWG N GQ+G G L H P + +I + ++
Sbjct: 200 AGGSHSIAYTSTE-AYAWGNNASGQLG-NGTT-LSNHMPQKVQLPS-----SITIRKISA 251
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
G H LAL ++W G N Y QL G +Q S +L++P V + +FA
Sbjct: 252 GGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQ-STPVQLTLPAGVTG--FIDVFA 304
Score = 170 (64.9 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 48/159 (30%), Positives = 81/159 (50%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIRALSGLGV 85
L + T I G H +A T ++WGN + GQLG +GT +N P++++ S + +
Sbjct: 191 LPIAPTAIVAGGSHSIAYTSTE-AYAWGNNASGQLG---NGTTLSNHMPQKVQLPSSITI 246
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+ISAGG H+ A G ++AWG N GQ+G G + P+ + + +
Sbjct: 247 RKISAGGSHNLALDSTGAIWAWGSNAYGQLG-NGT---TTNQSTPVQLT--LPAGVTGFI 300
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
DV G H++A+ + +++ G+N LS+G Q+S
Sbjct: 301 DVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLS 339
Score = 169 (64.5 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 49/178 (27%), Positives = 87/178 (48%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PRE 76
HMP ++ + + I+ G H LAL G +++WG+ + GQLG +GT N P +
Sbjct: 233 HMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLG---NGTTTNQSTPVQ 289
Query: 77 IRALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ +G+ G + + AG HS A + +Y WG+N G + V D + P + +
Sbjct: 290 LTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQL--SPAQVRDAS 347
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNS-LWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
+ +++ V V GS T+ + + +W G+N Y QL G S + ++++P
Sbjct: 348 NVPFTDVERV-VLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGT-TSNRTAPVQVALP 403
Score = 128 (50.1 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 35 ACGFDHCLALTQ-EGI--VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG 91
A G H LA+ + + + V +WG+ S GQ+G + + P +I G V Q++AG
Sbjct: 89 ATGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGG-AVQQVAAG 147
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
G HS A G ++AWG N+ GQ+ + P + ++ I + G
Sbjct: 148 GLHSMALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAK----LPIAPTAIVAGG 202
Query: 152 RHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
H++A + WG N QL G +S + ++ +P +
Sbjct: 203 SHSIAYTSTEAYAWGN--NASGQLGNGTTLSN-HMPQKVQLPSSI 244
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 190 (71.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 37/93 (39%), Positives = 54/93 (58%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG 84
HFLD + +ACG H +T EG +++WG G QLG+ + + MEP ++ +G
Sbjct: 1018 HFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNK--NERMEPHQVFEPNGAK 1075
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
V +S G H+ A T DG ++AWG N+ GQ GV
Sbjct: 1076 WVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGV 1108
Score = 175 (66.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 48/165 (29%), Positives = 79/165 (47%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
IACG +H L L+ G + +WG GQ G S AN+ ++ + +I+ G +
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLH--QVDG-DWPAIEKIACGQF 837
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
HSA DG L+ +GW GQ+G G+ ++ + + + + KV +ACG H
Sbjct: 838 HSAFICSDGSLWTFGWGVWGQLGHGGR-----NNSNQLVPTR-VNGLICKVTQIACGRAH 891
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSV-PEHVKN 197
T+ L D + CG Y Q+ + + +V T L + P V++
Sbjct: 892 TVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRD 936
Score = 143 (55.4 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 41/128 (32%), Positives = 64/128 (50%)
Query: 55 NGS--RGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
NGS R L P+ ++ RE++ +V ++ G HSA T +G LY WG
Sbjct: 992 NGSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLD 1051
Query: 113 GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
Q+G K + + +PH + F+ K V+V+ G+ HT+A DD S++ G N++
Sbjct: 1052 YQLGHGNKNERM--EPHQV-----FEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFG 1104
Query: 173 QLSMGCGV 180
Q CGV
Sbjct: 1105 Q----CGV 1108
Score = 127 (49.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 39/147 (26%), Positives = 67/147 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ IACG H + +G ++++G G GQLG+ + P + L V QI+
Sbjct: 829 IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI-CKVTQIAC 887
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSEDFDSQNIKVVDVAC 149
G H+ T G + G + GQ+GV+ + V P P+ ++V D+A
Sbjct: 888 GRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLG--------PLRVRDIAT 939
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSM 176
H++ + +DN ++ G N +L M
Sbjct: 940 HYYHSICITEDNRVFEWGRNP-QELKM 965
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 184 (69.8 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 51/143 (35%), Positives = 72/143 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA--NMEPREIRALSGL--GVV 86
+ + CG +H LAL +G V SWG+G + QLG + ++PRE GL G+V
Sbjct: 286 IKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREF----GLPKGIV 341
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
I AG +HS A Q G ++AWG N+ G+ G+ E D HP DS + K V
Sbjct: 342 HIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTV----VDSLSKKNV 397
Query: 146 DVACG-SRHTLALCDDNS--LWG 165
CG + H++A D +WG
Sbjct: 398 TQICGGAHHSIAATQDGECLVWG 420
Score = 176 (67.0 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 51/155 (32%), Positives = 69/155 (44%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN---MEPREIRALSGLGVVQ 87
+ I G H A+ Q G VF+WG S G+ G + D+ + P + +LS V Q
Sbjct: 340 IVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQ 399
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKL--DLVVHDPH--PMSWSEDFDSQNI 142
I G HS A TQDG WG +G Q G++ L D V+ D P E I
Sbjct: 400 ICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRILIEPTAVPGI 459
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
K VA GS H++A+ W G++ Q G
Sbjct: 460 KAKAVAAGSDHSIAIDTSGRPWSWGFSATYQTGQG 494
Score = 101 (40.6 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 33/97 (34%), Positives = 48/97 (49%)
Query: 82 GLGVVQISAGGWHSAARTQDGFLYAWGW--NNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
G +V+++AG S A T +G +Y WG +N G +G + K V P + D
Sbjct: 230 GTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTK-VQTTPKLLP-----DL 283
Query: 140 QNIKVVDVACGSRHTLALCDDNSL--WGCGWNEYNQL 174
+ IK + CG H LAL D ++ WG G + NQL
Sbjct: 284 KKIK--HLVCGDNHVLALNDKGAVLSWGSG--QQNQL 316
Score = 82 (33.9 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 20 PSRMDHFL--DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSS--GTDANMEPR 75
P H L D+ V +A G HC+ALT + V +WG +G LG ++ G +M+ R
Sbjct: 137 PRLNPHLLPDDVGVVQVAVGGMHCVALTHDNKVLTWGVNDQGALGRDTTWEGGYKDMDNR 196
Query: 76 E 76
+
Sbjct: 197 D 197
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 182 (69.1 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 50/153 (32%), Positives = 76/153 (49%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA--NMEPREI 77
P ++ F + +A G DH L L +EG+VF+WGNG + QLG ++PR
Sbjct: 212 PWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPF 271
Query: 78 RALSGLGVVQ-ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD--LVVHDPHPMSWS 134
GL V+ I++G H A T+D L +WG N GQ GV ++ +V P ++
Sbjct: 272 ----GLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALP 327
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
+ N+ + +A G H+L L D L+ CG
Sbjct: 328 D-----NVVIRSIAAGEHHSLILSQDGDLYSCG 355
Score = 158 (60.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 54/201 (26%), Positives = 90/201 (44%)
Query: 3 DHLASGPLKMLSQVFHMPSRMDHFLDLVVTD-IACGFDHCLALTQEGIVFSWGNG--SRG 59
+ L S P K+ + F + + L TD ++C AL G V++WG + G
Sbjct: 144 NELESTPAKIPRESFPPLAEGHKVVQLAATDNMSC------ALFSNGEVYAWGTFRCNEG 197
Query: 60 QLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--V 117
LG+ P ++ S +VQ++ G H ++G ++AWG Q+G V
Sbjct: 198 ILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKV 257
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ L DP P F +++K + A G H AL DN L G N++ Q +
Sbjct: 258 MERFRLKTLDPRP------FGLRHVKYI--ASGENHCFALTKDNKLVSWGLNQFGQCGVS 309
Query: 178 CGVSQVSVMT---RLSVPEHV 195
V +++T RL++P++V
Sbjct: 310 EDVEDGALVTKPKRLALPDNV 330
Score = 155 (59.6 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM--EPREIRALSGLGVVQISAG 91
IA G +HC ALT++ + SWG GQ G D + +P+ + + + I+AG
Sbjct: 279 IASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAG 338
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGV-EGKL-DLVVHDPHPMSWSEDFDSQ--NI-KVVD 146
HS +QDG LY+ G + +VG+ + L + D H + + ++ N+ K
Sbjct: 339 EHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKS 398
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
VA GS H++A+ + + G+ E + +G V TR+
Sbjct: 399 VAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRI 441
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 190 (71.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 59/196 (30%), Positives = 100/196 (51%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +++ D+V ++ GF H A+ G + +WG G GQLG+ T+ +EP+ I+
Sbjct: 796 LPFKLESLSDVV--SVSIGFCHGAAVRANGELLTWGVGENGQLGH--GDTNNQIEPKIIQ 851
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
+L+ + Q+ G H+ T++G +Y+WG + GQ+G+ G D+ H PM S +
Sbjct: 852 SLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGL-G--DVTQHSS-PMQVSA-LE 906
Query: 139 SQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
N V+ +A GS H L + G N +MG S VS+ T VP +K
Sbjct: 907 KYN--VLQIASGSTHCAVLTTSKEVLVFG----NGAAMGAA-SVVSLPTL--VPS-LKYL 956
Query: 199 PIVKLFAEHWNSARLS 214
I +L H+++A ++
Sbjct: 957 HIDRLCCGHYSTAAIT 972
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 51/177 (28%), Positives = 82/177 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT---DANMEPRE 76
P R+ +F + I+ G + LT+ G V+ WG G+ P G + + P +
Sbjct: 740 PERLPNFNIPDICSISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFK 799
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ +LS VV +S G H AA +G L WG GQ+G G + + +P +
Sbjct: 800 LESLSD--VVSVSIGFCHGAAVRANGELLTWGVGENGQLG-HGDTNNQI-EPKIIQSLTS 855
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
F + V CG +HT+ L + ++ G +EY QL +G V+Q S ++S E
Sbjct: 856 F-----WITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLG-DVTQHSSPMQVSALE 906
Score = 140 (54.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 41/147 (27%), Positives = 70/147 (47%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
+ V +P+ + L + + CG A+T+ G V++WG G +LG+ + T+ +
Sbjct: 941 ASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNSTETS-- 996
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-VEGKLDLVVHDPHPMS 132
P+ I AL + QIS GG H+A T G ++ G ++ GQ+G + G D +
Sbjct: 997 PKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSG-------DQNKPK 1049
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCD 159
E + V+CG + +AL D
Sbjct: 1050 RIESLTKTTF--ISVSCGENYNVALFD 1074
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 44/149 (29%), Positives = 69/149 (46%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V IA G HC LT V +GNG+ +G S + + P +L L + ++
Sbjct: 910 VLQIASGSTHCAVLTTSKEVLVFGNGAA--MGAASVVSLPTLVP----SLKYLHIDRLCC 963
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G + +AA T+ G +Y WG G ++G G + P E +Q+I+ ++CG
Sbjct: 964 GHYSTAAITECGDVYTWG--TGQELGHGGNST----ETSP-KLIEALRNQSIR--QISCG 1014
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
RHT L D ++ CG + + QL G
Sbjct: 1015 GRHTAFLTDSGRIFTCGKDSFGQLGQMSG 1043
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 180 (68.4 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 48/149 (32%), Positives = 77/149 (51%)
Query: 19 MPSRMDHFL--DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-----SGTDAN 71
+P +D + D V+D+ G+ H +A T+ G VF+WG + GQLG + D +
Sbjct: 275 LPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEH 334
Query: 72 M--EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+ P E++AL G QIS G H+ A G +++WGWN G G +G L + P
Sbjct: 335 LVRSPVEVKAL--FGATQISCGSEHNLA-VVGGRVFSWGWNEHGMCG-DGSLQDITQ-PQ 389
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLALC 158
P+ D + ++ + CG+ H++ALC
Sbjct: 390 PIPALADA----VALL-IGCGAGHSMALC 413
Score = 150 (57.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 44/161 (27%), Positives = 71/161 (44%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-R 78
P + F + + G HC LT G +F WG+ GQL SG+ P + R
Sbjct: 225 PCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQL---ISGSLFLPLPVALDR 281
Query: 79 A-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-VEGKLDLVVHDPHPMSWSED 136
+ L V + +G H A+T+ G ++ WG +N GQ+G ++ D H + +
Sbjct: 282 SMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVE 341
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ ++CGS H LA+ ++ GWNE+ G
Sbjct: 342 VKAL-FGATQISCGSEHNLAVVGGR-VFSWGWNEHGMCGDG 380
Score = 147 (56.8 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 44/131 (33%), Positives = 65/131 (49%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA---GGWHSAARTQDGFLY 105
++++WG S GQLG ++ A EPR + SGL QI A GG HSA + G L
Sbjct: 38 LLYTWGANSYGQLGQGNAEDQA--EPRRVE--SGLQEEQIRAVTGGGGHSALISDSGELL 93
Query: 106 AWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
G N+ GQ+G+ L+++ P+ F +V V+CG T+ L D +
Sbjct: 94 VCGQNHKGQLGLGHTLEIMTFQTCPLP---GFG----RVQQVSCGWDFTIILTGDGLVLA 146
Query: 166 CGWNEYNQLSM 176
CG N + QL +
Sbjct: 147 CGSNAFGQLGV 157
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++CG+D + LT +G+V + G+ + GQLG + T + EP +++ V ++A
Sbjct: 125 VQQVSCGWDFTIILTGDGLVLACGSNAFGQLGVSAEKTHS-AEPLLLKSFHE-PVTSVAA 182
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH-DPHP--MSWSEDF---DSQNIKV 144
G H+ A T G +Y WG G+ +++ P P +S E ++
Sbjct: 183 GLRHALASTASGCVYQWG------TGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTT 236
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
V GS H L + L+ G N++ QL G
Sbjct: 237 QKVIAGSAHCACLTVNGELFLWGSNKHGQLISG 269
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 189 (71.6 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 60/185 (32%), Positives = 87/185 (47%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L+L V I CG H L LT G+ +S GN + QLG A ++P + AL G+ +
Sbjct: 1171 LNLQVHAIKCGRQHTLILTNNGL-YSLGNNNLCQLGIGRHMQMA-LQPMLVTALDGMNIT 1228
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
+ AG +H+AA DG LY WGW GQ+G +G + + P +S+ + F K++
Sbjct: 1229 MLEAGQYHNAA-VADGKLYMWGWGIYGQLG-QGSCENIA-TPQLVSFFK-FK----KILQ 1280
Query: 147 VACGSRHTLALCD-----------DNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
++ G HTL LC N L+ G N + QL G T L V V
Sbjct: 1281 ISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTG-NSDHGDTKTNLPVRLEV 1339
Query: 196 KNCPI 200
+C +
Sbjct: 1340 GDCSL 1344
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 182 (69.1 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 49/162 (30%), Positives = 84/162 (51%)
Query: 20 PSRMDHFLD----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P + FL+ + + +ACG LT GI+ ++G+GS G LG+ + TD + +P
Sbjct: 384 PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNL-TDIS-QPT 441
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD-PHPMSWS 134
+ AL G +VQ++ G H A + DG L+AWG +GG++G+ G + H+ P + +
Sbjct: 442 IVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGL-GTRES--HNCPQQVPVA 498
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
++Q V CG ++ L + CG N +N+L +
Sbjct: 499 PGQEAQR-----VVCGIDSSMILTSPGRVLACGSNRFNKLGL 535
Score = 116 (45.9 bits), Expect = 0.00051, P = 0.00051
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L+ D+ G H A+T G +++G+ GQLG +S + P ++ L G+ +V +
Sbjct: 569 LLCVDL--GTAHSAAITASGDCYTFGSNQHGQLG--TSSRRVSRAPCRVQGLEGIKMVMV 624
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G + A +G +Y+WG G++G + D P P+ E + V V+
Sbjct: 625 ACGDAFTVAVGAEGEVYSWGKGTRGRLG---RRDEDAGLPRPVQLDE---THPYMVTSVS 678
Query: 149 CGSRHTL 155
C +TL
Sbjct: 679 CCHGNTL 685
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 184 (69.8 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 53/168 (31%), Positives = 90/168 (53%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ G + ALT++G +F WG+ S GQ+G + T+ + P+++ G + IS
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV-TNVCV-PQQVTV--GKPISWISC 197
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD-PHPMSWSEDFDSQNIKVVDVAC 149
G +HSA T +G LY +G G++G+ +L LV H P P+ KVV VAC
Sbjct: 198 GYYHSAFVTTEGQLYTFGEPECGKLGLPNQL-LVNHRMPQPVPGIPG------KVVQVAC 250
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
G HT+ L + +++ G ++ QL +G + + SV + EH+K+
Sbjct: 251 GGGHTVVLTE-KAVYTFGLGQFGQLGLGTFLFETSVPKAI---EHIKD 294
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 57/195 (29%), Positives = 97/195 (49%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++PS+ F + V T ++CG +H +T ++ +G+ + GQLG S T + +P +
Sbjct: 25 NIPSKF-WFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS--KPTCV 81
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+AL V + G H+ T+ G +YA G NN GQ+G+ + H +S+ F
Sbjct: 82 KALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTF--HLISF---F 136
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK- 196
SQ K+ ++ GS + AL +D L+ G N Q+ G+ V T + VP+ V
Sbjct: 137 TSQR-KIKQLSAGSNTSAALTEDGELFMWGDNSEGQI----GLENV---TNVCVPQQVTV 188
Query: 197 NCPIVKLFAEHWNSA 211
PI + +++SA
Sbjct: 189 GKPISWISCGYYHSA 203
Score = 151 (58.2 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+CG+ H +T EG ++++G G+LG P+ + P+ + + G VVQ++ GG
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK-VVQVACGGG 253
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ T+ +Y +G GQ+G+ G P + +D Q I + ACG H
Sbjct: 254 HTVVLTEKA-VYTFGLGQFGQLGL-GTFLFETSVPKAIEHIKD---QKISFI--ACGENH 306
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
T + D ++ G + +L +G
Sbjct: 307 TALITDMGLMYTFGDGRHGKLGLG 330
Score = 143 (55.4 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 49/169 (28%), Positives = 78/169 (46%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
ACG +H L T+ G V++ G + GQLG + + S + Q+SAG
Sbjct: 93 ACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFT-SQRKIKQLSAGSNT 151
Query: 95 SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP----HPMSWSEDFDSQNIKVVDVACG 150
SAA T+DG L+ WG N+ GQ+G+E ++ V P+SW ++CG
Sbjct: 152 SAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISW-------------ISCG 198
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
H+ + + L+ G E +L + +Q+ V R+ P+ V P
Sbjct: 199 YYHSAFVTTEGQLYTFGEPECGKLGLP---NQLLVNHRM--PQPVPGIP 242
Score = 118 (46.6 bits), Expect = 0.00047, P = 0.00047
Identities = 44/161 (27%), Positives = 79/161 (49%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG H + LT++ V+++G G GQLG + + ++ P+ I + + I+
Sbjct: 245 VVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSV-PKAIEHIKDQKISFIAC 302
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+A T G +Y +G G++G+ G L+ + P S +F +++V +CG
Sbjct: 303 GENHTALITDMGLMYTFGDGRHGKLGL-G-LENSTNQFIPTLCS-NFLRFIVQLV--SCG 357
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV-MTRLS 190
HTL L G E +++ C + S+ ++ LS
Sbjct: 358 GCHTLVFATPR-LGGTEEMELKEINKSCFSAATSLSLSNLS 397
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 179 (68.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 50/178 (28%), Positives = 90/178 (50%)
Query: 5 LASGPLKMLSQVFHM-PSRMDHFLD----LVVTDIACGFDHCLALTQEGIVFSWGNGSRG 59
+ SG + V M P + FL+ + + ++CG LT GI+ ++G+GS G
Sbjct: 369 VGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNG 428
Query: 60 QLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG 119
LG+ + D +P+ + AL G +VQ+S G H A T + +++WG + G++G+
Sbjct: 429 CLGH-GNFNDVT-QPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLAT 486
Query: 120 KLDLVVHD-PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ D H+ P +S DF++Q V CG ++ + + + CG N +N+L +
Sbjct: 487 Q-DS--HNCPQQVSLPADFEAQR-----VLCGVDCSMIMSTQHQILACGNNRFNKLGL 536
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 41/166 (24%), Positives = 74/166 (44%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ L + ++CG H LA+T E VFSWG G G+LG + D++ P+++
Sbjct: 441 PKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQ--DSHNCPQQVSL 498
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKLD----LVVHDPHPMS 132
+ ++ G S + + A G N ++G V G + V + H
Sbjct: 499 PADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQ 558
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
+ K+V + G+ H++A+ + + G N++ QL GC
Sbjct: 559 LVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQL--GC 602
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 178 (67.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 49/185 (26%), Positives = 94/185 (50%)
Query: 20 PSRMDHFLD----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P + FL+ + + ++CG LT GI+ ++G+GS G LG+ + TD + +P+
Sbjct: 384 PQFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGH-GNFTDVS-QPK 441
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ AL G +VQ++ G H A + + ++AWG + G++G+ G L+ + P ++
Sbjct: 442 IVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGL-GTLECH-NSPQQVAVPP 499
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
+ ++Q V CG ++ L +N + CG N N+L G+ ++S S + V
Sbjct: 500 EHEAQR-----VICGIDSSMVLTVNNQILACGSNRCNKL----GLDRISSAEEPSPEDQV 550
Query: 196 KNCPI 200
+ +
Sbjct: 551 EEATV 555
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 44/175 (25%), Positives = 77/175 (44%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT-DANMEPREIR 78
P ++ L + +ACG H LA++ E VF+WG G G+LG GT + + P+++
Sbjct: 440 PKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGL---GTLECHNSPQQVA 496
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED-- 136
++ G S T + + A G N ++G++ ++ +P P E+
Sbjct: 497 VPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLD-RISSA-EEPSPEDQVEEAT 554
Query: 137 -F---DSQNIKVVDVAC---GSRHTLALCDDNSLWGCGWNEYNQLSMG-CGVSQV 183
F S + V C G+ H+ A+ + G N++ QL C S+V
Sbjct: 555 VFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRV 609
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 179 (68.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 50/154 (32%), Positives = 81/154 (52%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ G + ALT++G +F WG+ S GQ+G + P+++ G V IS
Sbjct: 142 IKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVC--VPQQVTI--GKPVSWISC 197
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HSA T DG LY +G G++G+ +L L H P SE + KV+ VACG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQL-LGNHRT-PQLVSEIPE----KVIQVACG 251
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
HT+ L + N+++ G ++ QL +G + + S
Sbjct: 252 GEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETS 284
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/170 (28%), Positives = 87/170 (51%)
Query: 26 FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGV 85
F + V ++CG +H +T ++ +G+ + GQLG S A +P ++AL V
Sbjct: 32 FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKS--AISKPTCVKALKPEKV 89
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+ G H+ T+ G +YA G NN GQ+G+ G + + H +S+ F S++ K+
Sbjct: 90 KLAACGRNHTLVSTEGGNVYATGGNNEGQLGL-GDTE-ERNTFHVISF---FTSEH-KIK 143
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
++ GS + AL +D L+ G N Q+ + VS V V ++++ + V
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLK-NVSNVCVPQQVTIGKPV 192
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 37/147 (25%), Positives = 72/147 (48%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V+ I+CG+ H +T +G ++ +G G+LG P+ + P+ + + V+Q++
Sbjct: 192 VSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK-VIQVAC 250
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ T++ +Y +G GQ+G+ G +P + E+ Q I + +CG
Sbjct: 251 GGEHTVVLTENA-VYTFGLGQFGQLGL-GTFLFETSEPKVI---ENIRDQTISYI--SCG 303
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMG 177
HT + D ++ G + +L +G
Sbjct: 304 ENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 45/147 (30%), Positives = 69/147 (46%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL-SGLGVVQISAGGW 93
ACG +H L T+ G V++ G + GQLG T+ I S + Q+SAG
Sbjct: 93 ACGRNHTLVSTEGGNVYATGGNNEGQLGL--GDTEERNTFHVISFFTSEHKIKQLSAGSN 150
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP----HPMSWSEDFDSQNIKVVDVAC 149
SAA T+DG L+ WG N+ GQ+G++ ++ V P+SW ++C
Sbjct: 151 TSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW-------------ISC 197
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSM 176
G H+ + D L+ G E +L +
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGL 224
Score = 118 (46.6 bits), Expect = 0.00048, P = 0.00048
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG +H + LT E V+++G G GQLG + + + EP+ I + + IS
Sbjct: 245 VIQVACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLFETS-EPKVIENIRDQTISYISC 302
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+A T G +Y +G G++G+ G + H P S +F +K+V ACG
Sbjct: 303 GENHTALITDIGLMYTFGDGRHGKLGL-GLENFTNHFI-PTLCS-NFLRFIVKLV--ACG 357
Query: 151 SRH 153
H
Sbjct: 358 GCH 360
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 181 (68.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 55/159 (34%), Positives = 82/159 (51%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P R+ L V A G H + L + G V+S+G +L + + T ++ EP
Sbjct: 31 PERV--LLSRPVLQAALGARHGVLLVEGGQVYSFG-----ELPWKQNQT-SSAEPILEAV 82
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW--SEDF 137
LS VV ++AG HS T+DG ++ WG N GQ G+ G L V+ +P P+ SE
Sbjct: 83 LSEQRVVFVAAGSAHSGVVTEDGGVHMWGENVHGQCGLLG-LS-VIPNPTPVGVLDSEAT 140
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
Q +K+++VACG +HTLAL + +W W QL +
Sbjct: 141 PPQTVKILEVACGDQHTLALSAKHEVWA--WGSGCQLGL 177
Score = 153 (58.9 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 40/125 (32%), Positives = 65/125 (52%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
H +L E V+SWG G GQLG+ ++P +++L+G V++++AG HS A T
Sbjct: 543 HLPSLQTE--VWSWGQGQDGQLGH--GDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALT 598
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD-SQNIKVVDVACGSRHTLALC 158
+++WG N GQ+G H P ++ + S I+V D+ G +HTL L
Sbjct: 599 AQSQVFSWGCNTSGQLG---------HMESPTTFPQLTKLSDGIRVWDIGAGLQHTLLLA 649
Query: 159 DDNSL 163
D + +
Sbjct: 650 DGDCI 654
Score = 54 (24.1 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQ 46
P ++DH V +ACG H +AL +
Sbjct: 187 PQKVDHLSGRHVLQVACGSAHSVALVR 213
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 176 (67.0 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 47/140 (33%), Positives = 71/140 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG--YPSSGTDANMEPREIRALSGLGVVQI 88
++ I+ G H LA+T G +++WG GQLG S D+ EP+ + L + V
Sbjct: 84 ISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAA 143
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
A G SAA DG L+ WG + GQ+G+ G + P S E+ +++ VV V+
Sbjct: 144 FASGVVSAAIGDDGSLWVWGRSKRGQLGL-GNGIIEARVP---SRVENLAAEH--VVKVS 197
Query: 149 CGSRHTLALCDDNSLWGCGW 168
G H LAL D ++G G+
Sbjct: 198 LGWGHALALTVDGKVFGWGY 217
Score = 167 (63.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 52/151 (34%), Positives = 74/151 (49%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V DIACG DH L L +G + S G+ GQLG S D M+P +I + I+A
Sbjct: 288 VADIACGSDHSLILCHDGTLLSAGSNIYGQLG--RSKQDLGMKPVDITE----SPISIAA 341
Query: 91 GGWHSAARTQDGF--LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G HS A G + +WGWN Q+G GK + + P + E FD ++ V+
Sbjct: 342 GLGHSLAICNRGERNILSWGWNRSRQLG-RGKPENL---PREV---EGFDGES--PASVS 392
Query: 149 CGSRHTLALCDDNS--LWGCGWNEYNQLSMG 177
G H+L + + +WGCG N +L +G
Sbjct: 393 AGRVHSLCVTEKGEAWVWGCGKN--GRLGLG 421
Score = 162 (62.1 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 52/154 (33%), Positives = 77/154 (50%)
Query: 50 VFSWGNGSRGQLGYPSSGTDA-NMEPREIRALSGL--GVVQISAGGWHSAARTQDGFLYA 106
V S+G+G+ G LG SS M+ E +S L + ISAG +HS A T G ++A
Sbjct: 46 VMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSDISSISAGHYHSLAVTSSGEIWA 105
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH---TLALCDDNSL 163
WG N+ GQ+G +V D S SE + ++ V+V + A+ DD SL
Sbjct: 106 WGRNDEGQLG------RIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSL 159
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRLS--VPEHV 195
W G ++ QL +G G+ + V +R+ EHV
Sbjct: 160 WVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHV 193
Score = 138 (53.6 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 44/127 (34%), Positives = 58/127 (45%)
Query: 34 IACGFDHCLALTQEGI--VFSWG-NGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
IA G H LA+ G + SWG N SR QLG G N+ PRE+ G +SA
Sbjct: 339 IAAGLGHSLAICNRGERNILSWGWNRSR-QLG---RGKPENL-PREVEGFDGESPASVSA 393
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HS T+ G + WG G++G+ D +P PM ED + V+ G
Sbjct: 394 GRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSD----EPEPMLL-EDVEGC---VLQAVAG 445
Query: 151 SRHTLAL 157
H+L L
Sbjct: 446 FDHSLIL 452
Score = 125 (49.1 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 43 ALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDG 102
A+ +G ++ WG RGQLG + +A + P + L+ VV++S G H+ A T DG
Sbjct: 152 AIGDDGSLWVWGRSKRGQLGLGNGIIEARV-PSRVENLAAEHVVKVSLGWGHALALTVDG 210
Query: 103 FLYAWGWNNGGQVGVEG 119
++ WG+ G+VG G
Sbjct: 211 KVFGWGYVADGRVGNVG 227
Score = 102 (41.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 130 PMSWSEDF--DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P++W ++ N KV D+ACGS H+L LC D +L G N Y QL
Sbjct: 272 PIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQL 318
Score = 93 (37.8 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 32/107 (29%), Positives = 47/107 (43%)
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
EP + V I+ G HS DG L + G N GQ+G K DL + P+
Sbjct: 276 EPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLG-RSKQDLGMK---PVD 331
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCD--DNSLWGCGWNEYNQLSMG 177
+E + +A G H+LA+C+ + ++ GWN QL G
Sbjct: 332 ITES-------PISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRG 371
Score = 88 (36.0 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWG---NGSRGQLGYP 64
+PSR+++ V ++ G+ H LALT +G VF WG +G G +G P
Sbjct: 181 VPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLP 229
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 176 (67.0 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 52/161 (32%), Positives = 78/161 (48%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI--RALSGL-- 83
D + + G H LALTQ G +++WG S GQLG+ D N P + GL
Sbjct: 294 DDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQ-QDRN-RPALLPWNRFPGLLE 351
Query: 84 ---GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF--- 137
++++ AGG S ART+ GF+Y WG + V G + H HPM +E++
Sbjct: 352 RNDRIIELIAGGARSLARTEQGFIYIWG---ARWLLVRGDPEFR-H--HPMLLTENYFPG 405
Query: 138 -DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +V++ G HTLA + ++ G N Y QL +G
Sbjct: 406 LRRRGDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLG 446
Score = 176 (67.0 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 48/161 (29%), Positives = 79/161 (49%)
Query: 25 HF-LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-----SSGTDA--NMEPRE 76
H+ L++ + + + H LT+EG ++ WG G+LG S T+ N P
Sbjct: 173 HYELNVTIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYL 232
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ G +VQ++ + ART G +Y WG+N G++G++ + D + HP+ S D
Sbjct: 233 LER--GDRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRL----HPVELSWD 286
Query: 137 FDSQ---NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
F + + ++ V G RHTLAL ++ G N Y QL
Sbjct: 287 FFPEWHPDDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQL 327
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 44/173 (25%), Positives = 77/173 (44%)
Query: 7 SGPLKMLSQVF-HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
S P ++ F ++ R D + L D + +A T +G V+ WG RG+LG
Sbjct: 219 SQPTELPQNFFPYLLERGDRIVQLNFAD-----RYLVARTAQGHVYVWGFNYRGRLGLDD 273
Query: 66 SGTDANMEPREI------RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG 119
+ P E+ ++Q+ G H+ A TQ G++YAWG N+ GQ+G
Sbjct: 274 E--QDRLHPVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRD 331
Query: 120 KLDLVVHDPHPMSWSE--DFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGW 168
+ D + P + W+ +N +++++ G +LA + + WG W
Sbjct: 332 QQDR--NRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWGARW 382
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 176 (67.0 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 52/161 (32%), Positives = 78/161 (48%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI--RALSGL-- 83
D + + G H LALTQ G +++WG S GQLG+ D N P + GL
Sbjct: 294 DDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQ-QDRN-RPALLPWNRFPGLLE 351
Query: 84 ---GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF--- 137
++++ AGG S ART+ GF+Y WG + V G + H HPM +E++
Sbjct: 352 RNDRIIELIAGGARSLARTEQGFIYIWG---ARWLLVRGDPEFR-H--HPMLLTENYFPG 405
Query: 138 -DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ +V++ G HTLA + ++ G N Y QL +G
Sbjct: 406 LRRRGDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLG 446
Score = 176 (67.0 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 48/161 (29%), Positives = 79/161 (49%)
Query: 25 HF-LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP-----SSGTDA--NMEPRE 76
H+ L++ + + + H LT+EG ++ WG G+LG S T+ N P
Sbjct: 173 HYELNVTIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYL 232
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ G +VQ++ + ART G +Y WG+N G++G++ + D + HP+ S D
Sbjct: 233 LER--GDRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRL----HPVELSWD 286
Query: 137 FDSQ---NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
F + + ++ V G RHTLAL ++ G N Y QL
Sbjct: 287 FFPEWHPDDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQL 327
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 44/173 (25%), Positives = 77/173 (44%)
Query: 7 SGPLKMLSQVF-HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
S P ++ F ++ R D + L D + +A T +G V+ WG RG+LG
Sbjct: 219 SQPTELPQNFFPYLLERGDRIVQLNFAD-----RYLVARTAQGHVYVWGFNYRGRLGLDD 273
Query: 66 SGTDANMEPREI------RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG 119
+ P E+ ++Q+ G H+ A TQ G++YAWG N+ GQ+G
Sbjct: 274 E--QDRLHPVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRD 331
Query: 120 KLDLVVHDPHPMSWSE--DFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGW 168
+ D + P + W+ +N +++++ G +LA + + WG W
Sbjct: 332 QQDR--NRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWGARW 382
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 175 (66.7 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 58/234 (24%), Positives = 111/234 (47%)
Query: 22 RMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG----------YPSSGTDAN 71
+++ F D +++ I G++H L +T++ ++ WG + QLG PSS ++
Sbjct: 170 KIEKFNDNIIS-IVSGYEHSLVVTKDDGIYGWGRNHKNQLGGRERVKDKSSSPSSPSEDE 228
Query: 72 MEPREIRALSGLGVV-----QISAGGWHSAARTQDGFLYAWGWNNGGQVGVE-GKLDLV- 124
+ I+ L + +I +G H+ DG LY+WG G +G G D
Sbjct: 229 YYSKPIKVLKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKEN 288
Query: 125 VHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVS-QV 183
++ P ++ + ++ ++VD+ACG H++ L +DN ++ G+ E+ QL G +
Sbjct: 289 IYTPKKIT-TFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNH 347
Query: 184 SVMTRL-SVPEHVKNCPIVKLFA-EHWNSARLSVPEHAKDSSIVKLFAGHWNSG 235
+ R+ S ++ I +FA +H NS ++ D S+ ++ WN G
Sbjct: 348 YIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITT-----DGSV---YSWGWNDG 393
Score = 172 (65.6 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 48/151 (31%), Positives = 79/151 (52%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL----SGLGVV 86
+ DIACG H + LT + ++++G G GQLG+ + T + P+ I++ +G +
Sbjct: 307 IVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIK 366
Query: 87 QISAGGW-HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
I AG +S T DG +Y+WGWN+GG +G G ++ H S + NIK
Sbjct: 367 SIFAGDHANSFYITTDGSVYSWGWNDGGSLG-HG-----TNENH-YSPKKIQSLSNIK-- 417
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ G +HTLA +N ++ G N + Q ++
Sbjct: 418 KITSGFKHTLAQSINNDIYVFGDNTFGQTAL 448
Score = 172 (65.6 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 48/159 (30%), Positives = 77/159 (48%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA-NM-EPREIRALS----GLGVVQ 87
I G DH L L +G ++SWGNG G LG+ D N+ P++I + +V
Sbjct: 250 ICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVD 309
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD-PHPMSWSEDFDSQNIKVVD 146
I+ GG+HS T D +Y +G+ GQ+G G+ D + H P + + D + N K+
Sbjct: 310 IACGGYHSMFLTNDNEIYTFGYGEFGQLG-HGENDTLNHYIPKRIKSTGDNAAGN-KIKS 367
Query: 147 VACGSR-HTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
+ G ++ + D S++ GWN+ L G + S
Sbjct: 368 IFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYS 406
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 166 (63.5 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 43/155 (27%), Positives = 76/155 (49%)
Query: 24 DHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR------EI 77
D + + I+CG +H LAL+ + V+SWG+ G+LG+ + + PR +I
Sbjct: 364 DQMNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKI 423
Query: 78 RALS--GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
++L G+ V+ +S+G H A T D + WG + GQ+G + D+ P
Sbjct: 424 KSLQEKGVTVISVSSGYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIW----SPFEIKR 479
Query: 136 DFDSQNIKVVDVACGSRHTLALC-DDNSLWGCGWN 169
D +N K+V + CG ++ + + L+ GW+
Sbjct: 480 VID-KNEKIVQICCGYFNSFFITLEKRELYQFGWS 513
Score = 142 (55.0 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNG-SRGQLGYPSS----GTDANMEPRE-IRALSGLG 84
+ ++CG H L L+ G ++SWG+ S GQLG+ S G N++ I+ALSG
Sbjct: 40 IVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDS 99
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
V+Q+S G + T G +Y WG N GQ+ +
Sbjct: 100 VIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLAL 132
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 37/134 (27%), Positives = 60/134 (44%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+F WG G + G +EP E+ L+ +VQ+S G H+ + G LY+WG
Sbjct: 12 IFYWGRGV-------NQGDKHIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGS 64
Query: 110 NNG-GQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
+N GQ+G + + +S V+ V+ G T L D S++ G
Sbjct: 65 SNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGS 124
Query: 169 NEYNQLSMGCGVSQ 182
N QL++G V++
Sbjct: 125 NIEGQLALGQPVNK 138
Score = 91 (37.1 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 138 DSQN-IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTR-LSVPEHV 195
D N IK++ ++CGS H LAL D ++ G E+ +L G S VS R ++ P+ +
Sbjct: 364 DQMNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKI 423
Query: 196 KN 197
K+
Sbjct: 424 KS 425
Score = 55 (24.4 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVP 192
E+ D+ N ++ ++ G HTL L ++ G E+ QL + S + + ++ P
Sbjct: 558 ENNDNSN-RIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYP 614
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 172 (65.6 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 53/169 (31%), Positives = 76/169 (44%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +D + V ++CG H L LT VFS GN S GQ G + E ++
Sbjct: 161 VPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVH 220
Query: 79 ALSGLG--VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ VVQ+ G HS T G +Y+ GW GQ G+ G + + P +
Sbjct: 221 RMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGL-GHYN-ITSTPSKLGG--- 275
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
D + VV VA LAL D ++G G +EY QL+ +QV+V
Sbjct: 276 -DLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNV 323
Score = 167 (63.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 55/190 (28%), Positives = 86/190 (45%)
Query: 6 ASGP-----LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSR- 58
+SGP L+ ++ +P R++ LD ++ ACG+ L ++ + + WG G
Sbjct: 78 SSGPGPRAGLRPRRRIQPVPYRLE--LDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNK 135
Query: 59 -GQLGYPSSGTDAN------MEPREIRAL----SGLGVVQISAGGWHSAARTQDGFLYAW 107
QLG+ S D +EP + V+Q+S G HS T +++
Sbjct: 136 DSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSM 195
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G N+ GQ G + D V + H + +DFD Q VV V CG H+L L D ++ CG
Sbjct: 196 GNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQ---VVQVVCGQDHSLFLTDKGEVYSCG 252
Query: 168 WNEYNQLSMG 177
W Q +G
Sbjct: 253 WGADGQTGLG 262
Score = 157 (60.3 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 50/163 (30%), Positives = 80/163 (49%)
Query: 20 PSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
PS++ L + V +A D CLAL+ +G VF WGN QL + T N+ PR +
Sbjct: 270 PSKLGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNV-PRCL- 327
Query: 79 ALSGLGVV-QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKL-DLVVHD--PHPMSWS 134
SG+G V Q++ GG A +G ++ WG+ G +G KL + + + P +
Sbjct: 328 PFSGVGKVKQVACGGTGCAVLNAEGHVFVWGY---GILGKGPKLLETAIPEMIPPTLFGL 384
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+F+ + ++V + CG H AL + L+ G N L +G
Sbjct: 385 TEFNPE-VQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIG 426
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 44/131 (33%), Positives = 56/131 (42%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VV 86
V +ACG C L EG VF WG G G+ M P + L+ V
Sbjct: 335 VKQVACGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVS 394
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QI G H AA T G L+ WG N G +G+ G+L+ D + W + VD
Sbjct: 395 QIRCGLSHFAALTNKGELFVWGKNIRGCLGI-GRLE----DQY-FPWRVTMPGEP---VD 445
Query: 147 VACGSRHTLAL 157
VACG H + L
Sbjct: 446 VACGVDHMVTL 456
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 172 (65.6 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 49/137 (35%), Positives = 72/137 (52%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAAR 98
H L +T EG ++SWG +GQLG+ G +E PR I ALS +V + G H+ A
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGH---GDTKRVEAPRLIEALSHEAIVLAACGRNHTLAL 215
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLAL- 157
T G ++A+G N GQ+G+ + D V P P ++ Q I +ACG+ ++ +
Sbjct: 216 TDTGSVFAFGENKMGQLGLGNQTDAV---PSPAQIM--YNGQPI--TKMACGAEFSMLMD 268
Query: 158 CDDNSLWGCGWNEYNQL 174
C N L+ G EY QL
Sbjct: 269 CKGN-LYSFGCPEYGQL 284
Score = 155 (59.6 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 51/157 (32%), Positives = 76/157 (48%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWH 94
ACG +H LALT G VF++G GQLG + TDA P +I +G + +++ G
Sbjct: 206 ACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIM-YNGQPITKMACGAEF 263
Query: 95 SAARTQDGFLYAWGWNNGGQVG--VEGKL----DLVVHD----PHPMSW--SEDFDSQ-- 140
S G LY++G GQ+G +GK + +D P ++ + D Q
Sbjct: 264 SMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQIL 323
Query: 141 ---NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
N+ V DVACG+ HTL L ++ G+ Y +L
Sbjct: 324 PVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRL 360
Score = 145 (56.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 44/141 (31%), Positives = 69/141 (48%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS--GLGV 85
++VV D+ACG +H L L + VFSWG G G+LG+ + M PR ++ G G
Sbjct: 327 NVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE--MVPRLVKLFDFPGRGA 384
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
QI AG S A ++ G L+ WG N + E + +P + +D I+
Sbjct: 385 TQIYAGYTCSFAVSEVGGLFFWGATNTSR---ESTM-------YPKA-VQDLCGWRIR-- 431
Query: 146 DVACGSRHTLALCDDNSL-WG 165
+ACG + D++++ WG
Sbjct: 432 SLACGKSSIIVAADESTISWG 452
Score = 121 (47.7 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 41/120 (34%), Positives = 56/120 (46%)
Query: 60 QLGYPSSGTDANMEPREIRALSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGV 117
Q Y + G + P LSG+ V + +G HS T +G L++WG N GQ+G
Sbjct: 124 QAAYRNLGQNL-WGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLG- 181
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G V P + E + I V ACG HTLAL D S++ G N+ QL +G
Sbjct: 182 HGDTKRV-EAPRLI---EALSHEAI--VLAACGRNHTLALTDTGSVFAFGENKMGQLGLG 235
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 172 (65.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 46/149 (30%), Positives = 75/149 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +A G DH +ALT G V++WGNG + QLG ++ + L+ ++ + A
Sbjct: 228 ICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLER-RRLQGLTPQPLALKNIISVGA 286
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD---LVVHDPHPMSWSEDFDSQNIKVVDV 147
G +HS A G +YAWG N Q G+E + + V+ P + E + N+K +
Sbjct: 287 GSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGY---NVK--SI 341
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
G HTLAL +D + G ++ +QL +
Sbjct: 342 TGGEHHTLALLEDGRVLAWGRDDRHQLGI 370
Score = 149 (57.5 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 44/165 (26%), Positives = 74/165 (44%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM---EPREIRALSGLGVVQ 87
+ + G H A+ +G V++WG Q G + +P + AL G V
Sbjct: 281 IISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKS 340
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKL-DLVVHDPHPMSW--SEDFDSQNI- 142
I+ G H+ A +DG + AWG ++ Q+G+ + L + VV D ++ S +
Sbjct: 341 ITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLT 400
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
V+ V CG+ H LA+ D ++ G E ++ G V+V T
Sbjct: 401 NVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPT 445
Score = 124 (48.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 44/155 (28%), Positives = 74/155 (47%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPR--EIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
V+ +G+GS +LG D PR I + +GVV ++ GG HSAA + DG +Y W
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 108 GWNNG---GQVGVEGKL---DLVVHDPHPMSWSE-DFDSQNIKVVDVACGSRHTLALCDD 160
G N+ G++ + K D V +D + S+ + +++V V C T A+ D+
Sbjct: 133 GVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDN 192
Query: 161 NSLWGCGWNEYNQLSMGCGVSQ--VSVMTRLSVPE 193
+ G + +G SQ + T++ +PE
Sbjct: 193 GCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPE 227
Score = 121 (47.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 40/117 (34%), Positives = 53/117 (45%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG---TDANM 72
V P+ +D V I G H LAL ++G V +WG R QLG P + T
Sbjct: 323 VITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKD 382
Query: 73 EPREIRALS------GL-GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD 122
E LS GL V+Q+ G H+ A T DG +Y+WG +VG +G D
Sbjct: 383 EKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVG-QGDND 438
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 174 (66.3 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ V ++CG D + +T EG ++S+G+ G LG S +EP
Sbjct: 396 YRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLL 455
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ V Q+S G H A T+ +Y+WG G++G++ + D V+ P +
Sbjct: 456 VDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDD--VYSPQKVEVQ-- 511
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ + +V+V CGS + L + CG NE+N+L +
Sbjct: 512 ---RGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGL 548
Score = 163 (62.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 49/170 (28%), Positives = 80/170 (47%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S+V P +D FL+ V ++CG H +ALT+ V+SWG G G+LG S D
Sbjct: 448 SEVLE-PLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSE--DDVYS 504
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHD----- 127
P+++ GL +V + G S T G + A G N ++G+ + ++ H+
Sbjct: 505 PQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEV 564
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P+ S + K+ ++ G HT A+ + L G N+ QL +G
Sbjct: 565 PYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVG 614
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 51/166 (30%), Positives = 79/166 (47%)
Query: 20 PSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGN---GSR--GQLGYPSSGTDANM- 72
P ++D F + G H +T E +++W N GS+ GQLG+ G A+
Sbjct: 341 PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGH---GDRASYR 397
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+P+ + L G V ++S G + T +G LY++G + G +GV V +P +
Sbjct: 398 QPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLV- 456
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWNEYNQLSM 176
DF N V V+CG H +AL S+ WGCG EY +L +
Sbjct: 457 ---DF-FLNEPVDQVSCGDSHIMALTRSKSVYSWGCG--EYGRLGL 496
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 171 (65.3 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 55/167 (32%), Positives = 78/167 (46%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG--VVQI 88
V ++CG H L LT VF+ GN S GQ G + E I L+ VVQ+
Sbjct: 167 VLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDSRVVQV 226
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
G HS RT+ G ++A GW GQ G+ G ++ P D NI V V+
Sbjct: 227 VCGQDHSLFRTKKGAVFACGWGADGQTGL-GHYNIT---SVPTKLGGDIAGVNI--VQVS 280
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
LA+ D+ L+G G +EY QL+ V+ T+++VP H+
Sbjct: 281 SYGDCCLAVSDEGDLFGWGNSEYLQLA------SVTETTQVNVPRHL 321
Score = 149 (57.5 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 50/161 (31%), Positives = 77/161 (47%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
D CLA++ EG +F WGN QL + T N+ PR + G + + + GG +
Sbjct: 284 DCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNV-PRHLPFKIGK-IKEAACGGTGNIVL 341
Query: 99 TQDGFLYAWGWNNGGQVGVEGKL-DLVVHDPHPMS---WSEDFDSQNIKVVDVACGSRHT 154
T++G ++ WG+ G +G L + V + P S WS DF S +++V V CG H
Sbjct: 342 TEEGAVFVWGY---GILGKGPNLTETAVPEMIPPSLFGWS-DFSS-DVRVARVRCGLSHF 396
Query: 155 LALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
AL + L+ G N L +G Q R+++P V
Sbjct: 397 AALTNRGELFVWGKNLRGCLGIGRMEDQYFPW-RVTIPGEV 436
Score = 148 (57.2 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 51/172 (29%), Positives = 74/172 (43%)
Query: 31 VTDIACGFDHCLALTQE-GIVFSWGNGSR--GQLGYPSS------GTDANMEPREI---- 77
+T ACG+ L + I WG G QLG+ S G + +EP I
Sbjct: 100 ITSAACGYGFTLLSSNTTDITKVWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPLPL 159
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
V+Q+S G HS T ++ G N+ GQ G + D + + H + DF
Sbjct: 160 EKPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDF 219
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRL 189
DS +VV V CG H+L +++ CGW Q +G + SV T+L
Sbjct: 220 DS---RVVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLG-HYNITSVPTKL 267
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/154 (25%), Positives = 74/154 (48%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H+ +++ F D V + CG DH L T++G VF+ G G+ GQ G + P ++
Sbjct: 211 HLIHQLNDF-DSRVVQVVCGQDHSLFRTKKGAVFACGWGADGQTGL--GHYNITSVPTKL 267
Query: 78 RA-LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSE 135
++G+ +VQ+S+ G A + +G L+ WG N + + + V+ P + +
Sbjct: 268 GGDIAGVNIVQVSSYGDCCLAVSDEGDLFGWG--NSEYLQLASVTETTQVNVPRHLPFKI 325
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
K+ + ACG + L ++ ++ WG G
Sbjct: 326 G------KIKEAACGGTGNIVLTEEGAVFVWGYG 353
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 40/131 (30%), Positives = 60/131 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VV 86
+ + ACG + LT+EG VF WG G G+ + M P + S V
Sbjct: 328 IKEAACGGTGNIVLTEEGAVFVWGYGILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVA 387
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++ G H AA T G L+ WG N G +G+ G+++ D + W + VVD
Sbjct: 388 RVRCGLSHFAALTNRGELFVWGKNLRGCLGI-GRME----DQY-FPWRVTIPGE---VVD 438
Query: 147 VACGSRHTLAL 157
VACG H +++
Sbjct: 439 VACGVDHMVSM 449
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 174 (66.3 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 63/233 (27%), Positives = 105/233 (45%)
Query: 8 GPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSG 67
G L S V +P ++ + L V IACG H ++++G VF+WG S G+LG+ G
Sbjct: 252 GYLGSRSDVL-IPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGH-GMG 309
Query: 68 TDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWG--WNNGGQVGVEGKLDLVV 125
D P+ I +L+ + ++ G +H+ A T G +Y WG +N G +G G D+
Sbjct: 310 KDVT-GPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLG-HGT-DVSH 366
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
P +S + +++ V+CG HT + L+ G + L G + +V
Sbjct: 367 WIPKRISGP----LEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG---DKETV 419
Query: 186 MTRLSVPEHVKNCPIVKLFAEHWNSARLS--VPEHAKDS-SIVKLFAGHWNSG 235
V E + + + W++A + + H+ S S KLF W G
Sbjct: 420 FYPREV-ESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFT--WGDG 469
Score = 129 (50.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 43/156 (27%), Positives = 71/156 (45%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + +D +ACG + LT G V++ G+ GQLG P++ D +
Sbjct: 485 PTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNA--DGKLPCLVEDK 542
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ V +I+ G +H A T ++ WG G++G G V D + +
Sbjct: 543 LTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLG-HGD----VEDRKAPTLVDALKE 597
Query: 140 QNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
+++K ++ACGS T A+C W G E +Q S
Sbjct: 598 RHVK--NIACGSNFTAAICLHK--WVSG-TEQSQCS 628
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 52/200 (26%), Positives = 84/200 (42%)
Query: 16 VFHMPSRMDHFLDLVVTDIACGFDHCLALTQ-----------EGIVFSWGNGSRGQLGYP 64
VF+ P ++ L +ACG H A+ + G +F+WG+G + +LG+
Sbjct: 419 VFY-PREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHG 477
Query: 65 SSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG---VEGKL 121
+ ++P + AL +++ G + T G +Y G GQ+G +GKL
Sbjct: 478 DK--EPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKL 535
Query: 122 DLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWNEYNQLSMGCG 179
+V D ++D V ++ACG+ H L N + WG G N +L G
Sbjct: 536 PCLVED----KLTKDC------VEEIACGAYHVAVLTSRNEVFTWGKGAN--GRLGHG-D 582
Query: 180 VSQVSVMTRLSV--PEHVKN 197
V T + HVKN
Sbjct: 583 VEDRKAPTLVDALKERHVKN 602
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 171 (65.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 55/170 (32%), Positives = 78/170 (45%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +D + V ++CG H L LT EG VFS GN S GQ G + E +
Sbjct: 164 VPLPLDRPQETRVLQVSCGRAHSLVLTDGEG-VFSMGNNSYGQCGRKVVENEIYSESHRV 222
Query: 78 RALSGLG--VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ VVQ++ G HS T G +Y+ GW GQ G+ G + + P +
Sbjct: 223 HRMQDFDGQVVQVACGQDHSLFLTDQGEVYSCGWGADGQTGL-GHYN-ITSTPTKLGG-- 278
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
D + VV VA LA+ D L+G G +EY QL+ +QV+V
Sbjct: 279 --DLAGVNVVQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNV 326
Score = 166 (63.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 51/172 (29%), Positives = 79/172 (45%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSR--GQLGYPSSGTDAN---- 71
+P R++ LD ++ ACG+ L ++ + I WG G QLG+ S D
Sbjct: 99 VPYRLE--LDQKISSAACGYGFTLLSSKTKDITKVWGMGLNKDSQLGFHRSRKDKTRGYE 156
Query: 72 --MEPREIRAL----SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
+EP + V+Q+S G HS T +++ G N+ GQ G + + +
Sbjct: 157 YVLEPSPVPLPLDRPQETRVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIY 216
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ H + +DFD Q VV VACG H+L L D ++ CGW Q +G
Sbjct: 217 SESHRVHRMQDFDGQ---VVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLG 265
Score = 135 (52.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 44/150 (29%), Positives = 70/150 (46%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV-QIS 89
V +A D CLA++ +G +F WGN QL + T N+ PR + SG+G V Q +
Sbjct: 285 VVQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNV-PRCL-PFSGVGQVKQAA 342
Query: 90 AGGWHSAARTQDGFLYAWGWN--NGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
GG A +G ++ WG+ G +E L ++ P + +F+ ++V +
Sbjct: 343 CGGTGCAVLNGEGHVFVWGYGILGKGPNLLETALPEMI--PPTLFGLSEFNP-GVQVSRI 399
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG H AL + L+ G N L +G
Sbjct: 400 RCGLSHFAALTNRGELFVWGKNIRGCLGIG 429
Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 47/133 (35%), Positives = 61/133 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA--NMEPREIRALS----GLG 84
V ACG C L EG VF WG G G+ G P+ A M P + LS G+
Sbjct: 338 VKQAACGGTGCAVLNGEGHVFVWGYGILGK-G-PNLLETALPEMIPPTLFGLSEFNPGVQ 395
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V +I G H AA T G L+ WG N G +G+ G+L+ D + W + +
Sbjct: 396 VSRIRCGLSHFAALTNRGELFVWGKNIRGCLGI-GRLE----DQY-FPWRVTMPGEPM-- 447
Query: 145 VDVACGSRHTLAL 157
DVACG H + L
Sbjct: 448 -DVACGVDHMVTL 459
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 170 (64.9 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 54/158 (34%), Positives = 75/158 (47%)
Query: 31 VTDIACGFDHCLALTQ-EGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG--VVQ 87
V ++CG H L LT EG VFS GN S GQ G + E ++ + VVQ
Sbjct: 182 VLQVSCGRAHSLVLTDGEG-VFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQ 240
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
++ G HS T G +Y+ GW GQ G+ G + + P + D + VV V
Sbjct: 241 VACGQDHSLFLTDKGEVYSCGWGADGQTGL-GHYN-ITSAPTKLGG----DLAGVNVVQV 294
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
A LA+ D SL+G G +EY QL+ +QV+V
Sbjct: 295 ATYGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNV 332
Score = 166 (63.5 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 50/172 (29%), Positives = 78/172 (45%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSR--GQLGYPSSGTDAN---- 71
+P R++ LD ++ ACG+ L ++ + WG G QLG+ S D
Sbjct: 105 VPYRLE--LDQKISSAACGYGFTLLSSKTRDVTKVWGMGLNKDSQLGFHRSRKDKTRGYE 162
Query: 72 --MEPREI----RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
+EP + V+Q+S G HS T +++ G N+ GQ G + + +
Sbjct: 163 YVLEPSPVPLPLHRPQETQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIY 222
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ H + +DFD Q VV VACG H+L L D ++ CGW Q +G
Sbjct: 223 SESHKVHRMQDFDGQ---VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLG 271
Score = 141 (54.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 45/150 (30%), Positives = 70/150 (46%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV-QIS 89
V +A D CLA++ +G +F WGN QL + T N+ PR + SG+G V Q +
Sbjct: 291 VVQVATYGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNV-PRCL-PFSGVGQVKQAA 348
Query: 90 AGGWHSAARTQDGFLYAWGWN--NGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
GG A +G ++ WG+ G VE L ++ P + + + + ++V +
Sbjct: 349 CGGTGCAVLNGEGHVFVWGYGILGKGPNLVETALPEMI--PPTLFGLTELNPE-VRVSRI 405
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG H AL D L+ G N L +G
Sbjct: 406 RCGLSHFAALTDRGELFVWGKNIRGCLGIG 435
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 47/133 (35%), Positives = 60/133 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA--NMEPREIRALSGLG---- 84
V ACG C L EG VF WG G G+ G P+ A M P + L+ L
Sbjct: 344 VKQAACGGTGCAVLNGEGHVFVWGYGILGK-G-PNLVETALPEMIPPTLFGLTELNPEVR 401
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V +I G H AA T G L+ WG N G +G+ G+L+ D + W +
Sbjct: 402 VSRIRCGLSHFAALTDRGELFVWGKNIRGCLGI-GRLE----DQY-FPWRVTMPGEP--- 452
Query: 145 VDVACGSRHTLAL 157
VDVACG H + L
Sbjct: 453 VDVACGVDHMVTL 465
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 169 (64.5 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 53/169 (31%), Positives = 77/169 (45%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P +D + V ++CG H L LT VFS GN + GQ G + E ++
Sbjct: 161 VPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVH 220
Query: 79 ALSGL-G-VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ G VVQ+ G HS T G +Y+ GW GQ G+ G + + P +
Sbjct: 221 RMQDFEGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGL-GHYN-ITSTPSKLGG--- 275
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
D + VV VA LAL D ++G G +EY QL+ +QV+V
Sbjct: 276 -DLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNV 323
Score = 161 (61.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 49/160 (30%), Positives = 77/160 (48%)
Query: 20 PSRMDHFL-DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
PS++ L + V +A D CLAL+ +G VF WGN QL + T N+ PR +
Sbjct: 270 PSKLGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNV-PRCL- 327
Query: 79 ALSGLGVV-QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
SG+G V Q++ GG A ++G ++ WG+ G+ + L P + +F
Sbjct: 328 PFSGVGKVKQVACGGTGCAILNEEGHVFVWGYGILGKGPNLSETALPEMIPPTLFGLTEF 387
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ + +KV + CG H AL + L+ G N L +G
Sbjct: 388 NPE-VKVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIG 426
Score = 160 (61.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 54/190 (28%), Positives = 85/190 (44%)
Query: 6 ASGP-----LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSR- 58
+SGP L+ ++ +P R++ LD ++ ACG+ L ++ + + WG G
Sbjct: 78 SSGPGPRAGLRPRRRIQPVPYRLE--LDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNK 135
Query: 59 -GQLGYPSSGTDAN------MEPREIRAL----SGLGVVQISAGGWHSAARTQDGFLYAW 107
QLG+ S D +EP + V+Q+S G HS T +++
Sbjct: 136 DSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSM 195
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G N GQ G + D V + H + +DF+ Q VV V CG H+L L D ++ CG
Sbjct: 196 GNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQ---VVQVVCGQDHSLFLTDKGEVYSCG 252
Query: 168 WNEYNQLSMG 177
W Q +G
Sbjct: 253 WGADGQTGLG 262
Score = 135 (52.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 45/131 (34%), Positives = 58/131 (44%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG----VV 86
V +ACG C L +EG VF WG G G+ S M P + L+ V
Sbjct: 335 VKQVACGGTGCAILNEEGHVFVWGYGILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVS 394
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QI G H AA T G L+ WG N G +G+ G+L+ D + W + VD
Sbjct: 395 QIRCGLSHFAALTNKGELFVWGKNIRGCLGI-GRLE----DQY-FPWRVTMPGEP---VD 445
Query: 147 VACGSRHTLAL 157
VACG H + L
Sbjct: 446 VACGVDHMVTL 456
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 169 (64.5 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 54/166 (32%), Positives = 82/166 (49%)
Query: 13 LSQVFHMPSRMDHFLDLVVTDIACG--FDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDA 70
L Q P R D+ V+ + G H L +T EG ++SWG +GQLG+ G
Sbjct: 105 LGQNLWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGH---GDTK 161
Query: 71 NME-PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH 129
+E P+ I L +V + G H+ A T++G +Y +G N GQ+G + D V+ P
Sbjct: 162 RLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVL-SPA 220
Query: 130 PMSWSEDFDSQNIKVVDVACGSRHTLAL-CDDNSLWGCGWNEYNQL 174
+ ++ Q I V VACG+ ++ + C N L+ G EY QL
Sbjct: 221 TIQ----YNGQPI--VKVACGAEFSMIVDCKGN-LYSFGCPEYGQL 259
Score = 160 (61.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 52/172 (30%), Positives = 83/172 (48%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++ + V+ ACG +H LALT+ G V+++G GQLG + TDA + P I+
Sbjct: 166 PKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQ-TDAVLSPATIQ- 223
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKL----DLVVHD----PH 129
+G +V+++ G S G LY++G GQ+G +GK + D P
Sbjct: 224 YNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPR 283
Query: 130 PMSW--SEDFDSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
++ + D Q N+ DVACG+ HTL L ++ G+ Y +L
Sbjct: 284 RVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRL 335
Score = 142 (55.0 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 43/141 (30%), Positives = 63/141 (44%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS--GLGV 85
++V D+ACG +H L L + VFSWG G G+LG+ + M PR ++ G G
Sbjct: 302 NVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE--MVPRLVKLFDFPGRGA 359
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
QI G S A ++ G L+ WG N + V D W K+
Sbjct: 360 TQIYCGYQCSFALSEMGGLFFWGVTNTSREST--MYPKAVQDL--CGW---------KIR 406
Query: 146 DVACGSRHTLALCDDNSL-WG 165
+ACG + DD+++ WG
Sbjct: 407 SLACGKSSIIVAADDSTISWG 427
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 169 (64.5 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 48/137 (35%), Positives = 72/137 (52%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIRALSGLGVVQISAGGWHSAAR 98
H L +T EG ++SWG +GQLG+ G +E PR I LS +V + G H+ A
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGH---GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLAL 217
Query: 99 TQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLAL- 157
T+ G ++A+G N GQ+G+ + D V P P ++ Q I +ACG+ ++ +
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTDAV---PSPAQIM--YNGQPI--TKMACGAEFSMIMD 270
Query: 158 CDDNSLWGCGWNEYNQL 174
C N L+ G EY QL
Sbjct: 271 CKGN-LYSFGCPEYGQL 286
Score = 163 (62.4 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 52/162 (32%), Positives = 79/162 (48%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V+ ACG +H LALT+ G VF++G GQLG + TDA P +I +G + +++
Sbjct: 203 VIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIM-YNGQPITKMA 260
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVG--VEGKL----DLVVHD----PHPMSW--SEDF 137
G S G LY++G GQ+G +GK + +D P ++ +
Sbjct: 261 CGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTK 320
Query: 138 DSQ-----NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D Q N+ V DVACG+ HTL L ++ G+ Y +L
Sbjct: 321 DGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRL 362
Score = 143 (55.4 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 44/141 (31%), Positives = 69/141 (48%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS--GLGV 85
++VV D+ACG +H L L + VFSWG G G+LG+ + M PR ++ G G
Sbjct: 329 NVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE--MVPRLVKLFDFPGRGA 386
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
QI AG S A ++ G L+ WG N + E + +P + +D I+
Sbjct: 387 SQIYAGYTCSFAVSEVGGLFFWGATNTSR---ESTM-------YPKA-VQDLCGWRIR-- 433
Query: 146 DVACGSRHTLALCDDNSL-WG 165
+ACG + D++++ WG
Sbjct: 434 SLACGKSSIIVAADESTISWG 454
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 39/120 (32%), Positives = 57/120 (47%)
Query: 60 QLGYPSSGTDANMEPREIRALSGLGVVQISAGGW--HSAARTQDGFLYAWGWNNGGQVGV 117
Q Y + G + P L+G+ V + +G HS T +G L++WG N GQ+G
Sbjct: 126 QAAYRNLGQNL-WGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLG- 183
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G V P + E S + +V ACG HTLAL + S++ G N+ QL +G
Sbjct: 184 HGDTKRV-EAPRLI---EGL-SHEV-IVSAACGRNHTLALTETGSVFAFGENKMGQLGLG 237
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 168 (64.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/162 (30%), Positives = 78/162 (48%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS--GLGVVQI 88
V IA G + LA+TQ+G V+S+G+GS LG+ + ++PR I+A G+ ++++
Sbjct: 271 VVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDE--LQPRVIQAFKRKGIHILRV 328
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
SAG H+ A +G +Y WG G +G + D + P + + N V V
Sbjct: 329 SAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKIT--PQVL-----VNLNNCLAVQVC 381
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSM-GCGVSQVSVMTRL 189
R T L + L+G GW + L GVS + R+
Sbjct: 382 ARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRV 423
Score = 130 (50.8 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++ G +H +AL G V++WG G G LG+ + P+ + L+ VQ+ A
Sbjct: 328 VSAGDEHAVALDSNGRVYTWGKGYCGALGHGDEND--KITPQVLVNLNNCLAVQVCARKR 385
Query: 94 HSAARTQDGFLYAWGWNNGGQVGV--EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
+ + G LY +GW G +G G D V+ P + + +V V+ G
Sbjct: 386 KTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLR-PRVLECLKPH-----RVSQVSTGL 439
Query: 152 RHTLALCDDNSLWGCGWNEYNQL 174
HT+ + ++G G NE QL
Sbjct: 440 YHTIVVTQRGRIFGFGDNERAQL 462
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 167 (63.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 50/157 (31%), Positives = 71/157 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLG--VVQI 88
V ++CG H L LT VFS GN S GQ G + E + + VVQ+
Sbjct: 176 VLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQV 235
Query: 89 SAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVA 148
+ G HS T G +Y+ GW GQ G+ G + + P + D + V+ VA
Sbjct: 236 ACGQDHSLFLTDKGEVYSCGWGADGQTGL-GHYN-ITSSPTKLGG----DLAGVNVIQVA 289
Query: 149 CGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
LA+ D L+G G +EY QL+ +QV+V
Sbjct: 290 TYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNV 326
Score = 164 (62.8 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 51/172 (29%), Positives = 78/172 (45%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFS-WGNGSR--GQLGYPSSGTDAN---- 71
+P R++ LD ++ ACG+ L ++ V WG G QLG+ S D
Sbjct: 99 VPYRLE--LDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYE 156
Query: 72 --MEPREIRAL----SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
+EP + V+Q+S G HS T +++ G N+ GQ G + + +
Sbjct: 157 YVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIY 216
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
+ H + +DFD Q VV VACG H+L L D ++ CGW Q +G
Sbjct: 217 SESHRVHRMQDFDGQ---VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLG 265
Score = 140 (54.3 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 45/150 (30%), Positives = 71/150 (47%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV-QIS 89
V +A D CLA++ +G +F WGN QL + T N+ PR + SG+G V Q +
Sbjct: 285 VIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNV-PRCLH-FSGVGKVRQAA 342
Query: 90 AGGWHSAARTQDGFLYAWGWN--NGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
GG A +G ++ WG+ G VE + ++ P + +F+ + I+V +
Sbjct: 343 CGGTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMI--PPTLFGLTEFNPE-IQVSRI 399
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG H AL + L+ G N L +G
Sbjct: 400 RCGLSHFAALTNKGELFVWGKNIRGCLGIG 429
Score = 123 (48.4 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 49/149 (32%), Positives = 66/149 (44%)
Query: 14 SQVFHMPSRMDHFLDL-VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM 72
+QV ++P R HF + V ACG C L EG VF WG G G+ M
Sbjct: 322 TQV-NVP-RCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEM 379
Query: 73 EPREIRALSGLGV-VQIS---AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP 128
P + L+ +Q+S G H AA T G L+ WG N G +G+ G+L+ D
Sbjct: 380 IPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGI-GRLE----DQ 434
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLAL 157
+ W + VDVACG H + L
Sbjct: 435 Y-FPWRVTMPGEP---VDVACGVDHMVTL 459
>UNIPROTKB|G4NDH5 [details] [associations]
symbol:MGG_00913 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:CM001235 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
RefSeq:XP_003718048.1 ProteinModelPortal:G4NDH5
EnsemblFungi:MGG_00913T0 GeneID:2674805 KEGG:mgr:MGG_00913
Uniprot:G4NDH5
Length = 578
Score = 168 (64.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 41/98 (41%), Positives = 54/98 (55%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNG-----SRGQLGYP-----SSGTDANMEPREIRAL 80
V DI G DHCL LT G VFS + S+GQLG P + +P E++ L
Sbjct: 257 VVDIKSGLDHCLMLTSHGRVFSAASSTANYPSKGQLGIPGLTWLTRPKGPFDQPHEVKGL 316
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
GV QI+AG +HS A ++ L+AWG N+ GQ+G E
Sbjct: 317 PPAGVSQIAAGNYHSLALDKNSNLHAWGDNSSGQLGFE 354
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 170 (64.9 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 59/211 (27%), Positives = 95/211 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+ G H +T++G VF WGNG+ G+LG + D + P+ + +L + V ++
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVN-IDID-HPKRVESLEDVAVRSVAC 351
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
+ A T+ G LY WG + GG + G L +S D ++ V+ VACG
Sbjct: 352 SDHQTCAVTESGELYLWGID-GGTIEQSGSQFLT----RKIS---DVLGGSLTVLSVACG 403
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNS 210
+ HT + L+ G + L G S SV T+ E ++ ++ + W++
Sbjct: 404 AWHTAIVTSSGQLFTYGSGTFGVLGHG---SLESV-TKPKEVESLRRMKVISVSCGPWHT 459
Query: 211 ARLSVPEHAKD------SSIVKLFAGHWNSG 235
A ++ E A D S KLF W G
Sbjct: 460 A--AIVETANDRKFYNAKSCGKLFT--WGDG 486
Score = 160 (61.4 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 50/163 (30%), Positives = 82/163 (50%)
Query: 29 LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQI 88
L V +ACG H +T G +F++G+G+ G LG+ S ++ +P+E+ +L + V+ +
Sbjct: 395 LTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGS--LESVTKPKEVESLRRMKVISV 452
Query: 89 SAGGWHSAARTQD------------GFLYAWGWNNGGQVG-VEGKLDLVVHDPHPMSWSE 135
S G WH+AA + G L+ WG + G++G + K LV P +E
Sbjct: 453 SCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLV-----PTCVTE 507
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
D IKV +CG T+AL +++ G + + QL GC
Sbjct: 508 LIDHDFIKV---SCGWTLTVALSISGTVYTMGSSIHGQL--GC 545
Score = 144 (55.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 45/152 (29%), Positives = 73/152 (48%)
Query: 10 LKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
LK+ + H P R++ D+ V +AC A+T+ G ++ WG G + SG+
Sbjct: 326 LKVNIDIDH-PKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG-GTI--EQSGSQ 381
Query: 70 ANMEPREIRALSG--LGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
R+I + G L V+ ++ G WH+A T G L+ +G G +G G L+ V
Sbjct: 382 --FLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLG-HGSLESVTK- 437
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
P E + +KV+ V+CG HT A+ +
Sbjct: 438 --P---KEVESLRRMKVISVSCGPWHTAAIVE 464
Score = 125 (49.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 39/140 (27%), Positives = 67/140 (47%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P+ + +D ++CG+ +AL+ G V++ G+ GQLG P + D ++ +
Sbjct: 501 VPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRA-KDKSVNV-VLG 558
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFD 138
L+ V I++G H A T G +Y WG GQ+G+ G V D + E
Sbjct: 559 NLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGL-GD----VRDRNSPVLVEPLG 613
Query: 139 SQNIKVVDVACGSRHTLALC 158
+ ++ +ACG T A+C
Sbjct: 614 DRLVE--SIACGLNLTAAIC 631
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 169 (64.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 43/177 (24%), Positives = 79/177 (44%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ + ++CG D + +T EG ++++G+ G +G + +EP +
Sbjct: 424 YRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQ 483
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ V Q+S G H A T++ +Y WG G++G++ + D H D
Sbjct: 484 LDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEED------HYTPQKVD 537
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG-CGVSQVSVMTRLSVP 192
+ + +V V CG T L + CG NE+N+L + C ++ T VP
Sbjct: 538 VP-KTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVP 593
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 46/170 (27%), Positives = 81/170 (47%)
Query: 14 SQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME 73
S+V P ++D FL V ++CG +H LT+ V++WG G G+LG S + +
Sbjct: 476 SEVLE-PLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSE--EDHYT 532
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-EGKLDLVVHDPH--- 129
P+++ L +V + G + TQ G + A G N ++G+ + ++ HD +
Sbjct: 533 PQKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEV 592
Query: 130 PMSWSEDFDSQN--IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P + S Q K+ ++ G HT ++ + L G N+ QL +G
Sbjct: 593 PYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVG 642
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 45/151 (29%), Positives = 73/151 (48%)
Query: 34 IACGFDHCLALTQEGIVFSWGN---GSR--GQLGYPSSGTDANM-EPREIRALSGLGVVQ 87
+ G H +T E +++W N G++ GQLG+ G A+ +P+ + L G + Q
Sbjct: 384 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGH---GDRASYRQPKHVEKLQGKAIRQ 440
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+S G + T +G LYA+G + G +G++ V +P + DF N V V
Sbjct: 441 VSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQL----DFFLTN-PVEQV 495
Query: 148 ACGSRHTLALCDDNSL--WGCGWNEYNQLSM 176
+CG H L + + WGCG EY +L +
Sbjct: 496 SCGDNHVAVLTRNREVYTWGCG--EYGRLGL 524
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 169 (64.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 40/160 (25%), Positives = 74/160 (46%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ + ++CG D + +T EG ++++G+ G +G +EP +
Sbjct: 433 YRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQ 492
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ S V Q+S G H T++ +Y+WG G++G++ + D + P + D
Sbjct: 493 LNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY--YTPQKV----D 546
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I +V V CG T L + CG NE+N+L +
Sbjct: 547 VPKALI-IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGL 585
Score = 152 (58.6 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 44/164 (26%), Positives = 81/164 (49%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ F + V ++CG +H + LT+ V+SWG G G+LG S + P+++
Sbjct: 490 PMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE--EDYYTPQKVDV 547
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV-HDP-HPMSWSEDF 137
L +V + G + TQ G + A G N ++G+ + ++ H+ H + ++ F
Sbjct: 548 PKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSF 607
Query: 138 D-SQNI---KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ + K+ VA G HT A+ + L G N+ QL +G
Sbjct: 608 TLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVG 651
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 46/151 (30%), Positives = 75/151 (49%)
Query: 34 IACGFDHCLALTQEGIVFSWGN---GSR--GQLGYPSSGTDANM-EPREIRALSGLGVVQ 87
+ G H +T E +++W N G++ GQLG+ G A+ +P+ + L G + Q
Sbjct: 393 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGH---GDKASYRQPKHVEKLQGKAIRQ 449
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+S G + T +G LYA+G + G +GV+ V +P ++ F S N V V
Sbjct: 450 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLN----FFSNN-PVEQV 504
Query: 148 ACGSRHTLALCDDNSL--WGCGWNEYNQLSM 176
+CG H + L + + WGCG EY +L +
Sbjct: 505 SCGDNHVVVLTRNKEVYSWGCG--EYGRLGL 533
Score = 118 (46.6 bits), Expect = 0.00047, P = 0.00047
Identities = 47/168 (27%), Positives = 74/168 (44%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS--SGTDANMEP 74
++ P ++D L++ + CG D LTQ G V + G +LG SG +
Sbjct: 539 YYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAY 598
Query: 75 REI---------RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLV 124
E+ + LS + ++ G H+AA + G L +G N GQ+GV K L
Sbjct: 599 HEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG 658
Query: 125 VHD-PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN 169
++ P+ + V+ V+CG T+A DDN + WG G N
Sbjct: 659 INLLGGPLGGKQ--------VIRVSCGDEFTIAATDDNHIFAWGNGGN 698
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 167 (63.8 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 48/162 (29%), Positives = 80/162 (49%)
Query: 20 PSRMDHFLD----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P + FL+ + + +ACG LT GI+ ++G+GS G LG+ S D + +P
Sbjct: 387 PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLN-DIS-QPT 444
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD-PHPMSWS 134
+ AL G +VQ++ G H A + + L+AWG +GG++G+ G + H P +S
Sbjct: 445 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGL-GTRES--HSCPQQVSMP 501
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
++Q V CG ++ L CG N +N+L +
Sbjct: 502 PGQEAQR-----VVCGIDSSMILTVPGRALACGSNRFNKLGL 538
Score = 134 (52.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 54/192 (28%), Positives = 90/192 (46%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
L G L +SQ P+ ++ L + +ACG H LAL+ E +F+WG G G+LG
Sbjct: 432 LGHGSLNDISQ----PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGL- 486
Query: 65 SSGT-DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
GT +++ P+++ G ++ G S T G A G N ++G++ +L L
Sbjct: 487 --GTRESHSCPQQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLD-RLSL 543
Query: 124 VVHDPHP-------MSW----SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
+P P +S+ S FD + + VD+ G+ H+ A+ + G N++
Sbjct: 544 G-EEPAPNQQVEEALSFTPLGSAPFDREPLLSVDL--GTAHSAAVTASGDCYTFGSNQHG 600
Query: 173 QLSMGCGVSQVS 184
QL G +VS
Sbjct: 601 QL--GTNARRVS 610
Score = 117 (46.2 bits), Expect = 0.00039, P = 0.00039
Identities = 43/148 (29%), Positives = 64/148 (43%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYP--SSGTDA--NMEPREIRALSGLG----- 84
+ CG D + LT G + G+ +LG S G + N + E + + LG
Sbjct: 509 VVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFD 568
Query: 85 ---VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQN 141
++ + G HSAA T G Y +G N GQ+G + V P + QN
Sbjct: 569 REPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARR--VSRAPCQVQ-----GLQN 621
Query: 142 IKVVDVACGSRHTLALCDDNSL--WGCG 167
IK+ VACG T+A+ + + WG G
Sbjct: 622 IKIAMVACGDAFTVAVGAEGEVYSWGKG 649
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 168 (64.2 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 44/154 (28%), Positives = 75/154 (48%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ G + ALT++G +F WG+ S GQ+G P E+ G + IS
Sbjct: 142 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCI--PHEVTV--GKPISWISC 197
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HSA T DG LY +G G++G+ +L + P + + +V+ VACG
Sbjct: 198 GYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE------RVIQVACG 251
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVS 184
HT+ L + ++ G ++ QL +G + + S
Sbjct: 252 GGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETS 284
Score = 159 (61.0 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 50/164 (30%), Positives = 79/164 (48%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV-QISAGGW 93
ACG +H L T G V++ G + GQLG TD +I + + Q+SAG
Sbjct: 93 ACGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGAN 150
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
SAA T+DG L+ WG N+ GQ+G+E K ++ + PH ++ + ++CG H
Sbjct: 151 TSAALTEDGKLFMWGDNSEGQIGLEDKSNVCI--PHEVTVGKPISW-------ISCGYYH 201
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGV--SQVSVMTRLSVPEHV 195
+ + D L+ G E +L + + + S L +PE V
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV 245
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 37/144 (25%), Positives = 72/144 (50%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+CG+ H +T +G ++++G G+LG P+ + P+ + + V+Q++ GG
Sbjct: 195 ISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPER-VIQVACGGG 253
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ T+ +YA+G GQ+G+ G +P + +D Q K+ ++CG H
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGL-GTFLFETSEPKIIERIKD---Q--KICHISCGENH 306
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
T + + L+ G + +L +G
Sbjct: 307 TALMTELGLLYTFGDGRHGKLGLG 330
Score = 129 (50.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 46/160 (28%), Positives = 79/160 (49%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++PS+ D+ + ++CG +H +T ++ +G+ + GQLG S A ++P I
Sbjct: 25 NIPSKFWFKNDIPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKA--AIIKPTCI 81
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDP-HPMSWSED 136
+AL V + G H+ T G +YA G NN GQ+G+ G D D H + +
Sbjct: 82 KALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGL-GDTD--DRDTFHQIVFFTP 138
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
D+ IK ++ G+ + AL +D L+ G N Q+ +
Sbjct: 139 ADT--IK--QLSAGANTSAALTEDGKLFMWGDNSEGQIGL 174
Score = 125 (49.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 38/125 (30%), Positives = 66/125 (52%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG H + LT++ +V+++G G GQLG + + + EP+ I + + IS
Sbjct: 245 VIQVACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETS-EPKIIERIKDQKICHISC 302
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+A T+ G LY +G G++G+ G ++ + P S +F ++++ ACG
Sbjct: 303 GENHTALMTELGLLYTFGDGRHGKLGL-G-MENFTNQFFPTLCS-NFLRFAVQLI--ACG 357
Query: 151 SRHTL 155
H L
Sbjct: 358 GCHML 362
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 167 (63.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 56/200 (28%), Positives = 92/200 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG---SRGQLGYPSSGTDA-NMEPR 75
P R+ + V A G H + LT+ VF +G S G L + S + P
Sbjct: 32 PERLPGWGGKTVLHAALGVKHGVLLTE---VFKPSDGEVYSFGTLPWRSEPAETCPSNPI 88
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
AL G VV ++ G +H+ A T G +Y WG N+ GQ V + V +P+P+S S+
Sbjct: 89 LESALVGQYVVTVATGSFHTGAVTDSGVVYMWGENSAGQCAVANQP--YVPEPNPVSISD 146
Query: 136 DFDSQ--NIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPE 193
S ++++ +ACG HTLAL +W W QL + ++ +T+ E
Sbjct: 147 SETSPLLAVRILQLACGEEHTLALSLSREIWA--WGTGCQLGL---ITTTFPVTKPQKVE 201
Query: 194 HVKNCPIVKLFAEHWNSARL 213
H+ ++++ ++S L
Sbjct: 202 HLAGRVVLQVACGAFHSLAL 221
Score = 135 (52.6 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V++WG G GQLG+ ++P ++ L G V+ + AGG+HS A T +Y+WG
Sbjct: 532 VWTWGKGKEGQLGH--GDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGS 589
Query: 110 NNGGQVG 116
N GQ+G
Sbjct: 590 NTFGQLG 596
Score = 109 (43.4 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 21 SRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRAL 80
S L + + +ACG +H LAL+ +++WG G QLG ++ T +P+++ L
Sbjct: 147 SETSPLLAVRILQLACGEEHTLALSLSREIWAWGTGC--QLGLITT-TFPVTKPQKVEHL 203
Query: 81 SGLGVVQISAGGWHSAARTQ 100
+G V+Q++ G +HS A Q
Sbjct: 204 AGRVVLQVACGAFHSLALVQ 223
Score = 64 (27.6 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQ 46
P +++H VV +ACG H LAL Q
Sbjct: 197 PQKVEHLAGRVVLQVACGAFHSLALVQ 223
Score = 55 (24.4 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
W W G + G G D V+ P+ + D + +V+ + G H+LAL + ++
Sbjct: 533 WTWGKGKE-GQLGHGD-VLPRLQPLC-VKCLDGK--EVIHLEAGGYHSLALTAKSQVYSW 587
Query: 167 GWNEYNQL 174
G N + QL
Sbjct: 588 GSNTFGQL 595
Score = 42 (19.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 204 FAEHWNSARLSVPEHAKDSSIVKLFAGHWNSGILV 238
F++ W + I F+G W SGI +
Sbjct: 1229 FSDDWTLSGKGTLTMPNGDYIEGYFSGEWGSGIKI 1263
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 167 (63.8 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 59/233 (25%), Positives = 102/233 (43%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY 63
H + +++ F +P + + L I+CG ++ + +T++G ++SWG S G+LG+
Sbjct: 275 HKSGSSSSLMTDSF-LPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGH 333
Query: 64 PSSGTDANM-EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLD 122
G + + P+ I +G V G +H+ A T G LYAWG + G+ G
Sbjct: 334 ---GVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWG-DGDHNAGLLGLGS 389
Query: 123 LVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
H P+ + +K + +CG HT + + L+ G + L G +
Sbjct: 390 GASHWK-PVRILGQMEGIYVKAI--SCGPWHTAFVTSEGKLFTFGDGTFGALGHG---DR 443
Query: 183 VSVMTRLSVPEHVKNCPIVKLFAEHWNSARLSVPEHAKDSSIVKLFAGHWNSG 235
+S V E + C +K W+SA + V + +S KLF W G
Sbjct: 444 ISTNIPREV-EALNGCRTIKAACGVWHSAAV-VSVFGEATSSGKLFT--WGDG 492
Score = 136 (52.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 42/142 (29%), Positives = 67/142 (47%)
Query: 50 VFSWGNG-SRGQLG--YPSSGTDANME-----PREIRALSGLGVVQISAGGWHSAARTQD 101
VF WG G LG SG+ +++ P+ +++ L IS G ++ T+
Sbjct: 258 VFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQ 317
Query: 102 GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDN 161
G +Y+WG +GG++G G V PHP ++F+ +++ D CG HT A+
Sbjct: 318 GQMYSWGEESGGRLG-HGVCSYV---PHP-KLIDEFNGSTVELAD--CGEFHTCAVTASG 370
Query: 162 SL--WGCGWNEYNQLSMGCGVS 181
L WG G + L +G G S
Sbjct: 371 DLYAWGDGDHNAGLLGLGSGAS 392
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ACGF H L + V++WG GS GQLG+ T+ P ++AL G V ++
Sbjct: 566 VQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGH--GDTEYRCMPTLVKALKGKQVRKVVC 623
Query: 91 GGWHSA 96
G ++A
Sbjct: 624 GSNYTA 629
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 163 (62.4 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 49/144 (34%), Positives = 69/144 (47%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V G H + L+Q G V+S+G G LG +S + M P ++ VVQ+SA
Sbjct: 69 VVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSA 126
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+AA T+DG ++ WG GV G L+ + P+ D+Q VV VA G
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNN-GVIGLLEPMKKSMVPVQ--VQLDTQ---VVKVASG 180
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
+ H + L D L+ G E QL
Sbjct: 181 NDHLVMLTTDGDLYTLGCGEQGQL 204
Score = 140 (54.3 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 48/178 (26%), Positives = 83/178 (46%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANME----PREI 77
LD V +A G DH + LT +G +++ G G +GQLG + + G +E PR +
Sbjct: 170 LDTQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCV 229
Query: 78 RALS-GL-GVVQIS---AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
S G G V+ G + + A +++G +Y +G +N Q+G G + P ++
Sbjct: 230 LLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFI--PQNLT 287
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
F + V + G HT+ + + + G EY +L +G G + S+ T +S
Sbjct: 288 ---SFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS 342
Score = 139 (54.0 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 41/123 (33%), Positives = 60/123 (48%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFL 104
T+ G+V + G G GQLG S + +P + L VVQ AGG H+ +Q G +
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERK-KPALVPLLQD--VVQAEAGGMHTVCLSQSGQV 88
Query: 105 YAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS-- 162
Y++G N+ G +G + ++ P + E KVV V+ G HT AL +D
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQE-------KVVQVSAGDSHTAALTEDGRVF 141
Query: 163 LWG 165
LWG
Sbjct: 142 LWG 144
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 155 (59.6 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 47/144 (32%), Positives = 67/144 (46%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V G H + L++ G V+S+G G LG +S + M P ++ VVQ+SA
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSA 126
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+AA T DG ++ WG GV G L+ + P+ D + VV VA G
Sbjct: 127 GDSHTAALTDDGRVFLWGSFRDNN-GVIGLLEPMKKSMVPVQVQLD-----VPVVKVASG 180
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
+ H + L D L+ G E QL
Sbjct: 181 NDHLVMLTADGDLYTLGCGEQGQL 204
Score = 143 (55.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 50/164 (30%), Positives = 79/164 (48%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL--GVVQISAGGWHSAARTQDG 102
T+ G+V + G G GQLG N+ R+ AL + VVQ AGG H+ ++ G
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGE-----NVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSG 86
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y++G N+ G +G + ++ P + E KVV V+ G HT AL DD
Sbjct: 87 QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE-------KVVQVSAGDSHTAALTDDGR 139
Query: 163 --LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-NCPIVKL 203
LWG + + N + + + M + VP V+ + P+VK+
Sbjct: 140 VFLWG-SFRDNNGV-----IGLLEPMKKSMVPVQVQLDVPVVKV 177
Score = 107 (42.7 bits), Expect = 0.00081, P = 0.00081
Identities = 30/100 (30%), Positives = 50/100 (50%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGN--GSRGQLGYPSSGTDANMEPRE 76
+P +++ L V ++ G H ALT +G VF WG+ + G +G +M P +
Sbjct: 111 VPGKVE--LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEP-MKKSMVPVQ 167
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
++ + VV++++G H T DG LY G GQ+G
Sbjct: 168 VQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 167 (63.8 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 60/223 (26%), Positives = 100/223 (44%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR 78
+P ++ + L V IACG H +T++G +F+WG S G+LG+ G D PR +
Sbjct: 271 VPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDV-FHPRLVE 328
Query: 79 ALSGLGVVQ-ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH-DPHPMSWSED 136
+L+ V ++ G +H+ A T G LY WG + VG+ G + H P ++ S
Sbjct: 329 SLTATSSVDFVACGEFHTCAVTLAGELYTWG-DGTHNVGLLGHGSDISHWIPKRIAGS-- 385
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
+ + V V+CG HT + L+ G + L G + +V V E +
Sbjct: 386 --LEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHG---DKETVQYPREV-ESLS 439
Query: 197 NCPIVKLFAEHWNSARLS--VPEHAKDSSIV--KLFAGHWNSG 235
+ + W++A + + + SS+ KLF W G
Sbjct: 440 GLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFT--WGDG 480
Score = 147 (56.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 53/175 (30%), Positives = 82/175 (46%)
Query: 14 SQVFH-MPSRMDHFLD-LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN 71
S + H +P R+ L+ L V ++CG H +T G +F++G+G+ G LG+ T
Sbjct: 372 SDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETV-- 429
Query: 72 MEPREIRALSGLGVVQISAGGWHSAAR-----TQD-------GFLYAWGWNNGGQVGVEG 119
PRE+ +LSGL + +S G WH+AA TQ G L+ WG + ++G G
Sbjct: 430 QYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLG-HG 488
Query: 120 KLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
D + P + D++ I ACG T+ L ++ G Y QL
Sbjct: 489 DKDPRLK-PTCVPALIDYNFHKI-----ACGHSLTVGLTTSGQVFTMGSTVYGQL 537
Score = 144 (55.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 44/139 (31%), Positives = 66/139 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P+ + +D IACG + LT G VF+ G+ GQLG + TD +
Sbjct: 496 PTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG--NLQTDGKLPCLVEDK 553
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDS 139
L+ V +IS G +H AA T +Y WG G++G G L+ D + E
Sbjct: 554 LASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLG-HGDLE----DRKVPTIVEALKD 608
Query: 140 QNIKVVDVACGSRHTLALC 158
+++K + ACGS +T A+C
Sbjct: 609 RHVKYI--ACGSNYTAAIC 625
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 162 (62.1 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 51/154 (33%), Positives = 76/154 (49%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV 86
L + +ACG+D + LT+ G V S G+ S GQLG P G + P+ I L VV
Sbjct: 99 LGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPH-GPRRCVIPQAIELLREK-VV 156
Query: 87 QISAGGWHSAARTQDGFLYAWGWN--NGGQVGVEGK---LDLVVHDPHPMSWSEDFDSQN 141
I+AG H+ A T G ++ WG + G+ G+ L L +P ++ E N
Sbjct: 157 SIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLE-----N 211
Query: 142 IKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
+ V V GS H+ +L D L+ G N++ QL+
Sbjct: 212 SQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA 245
Score = 150 (57.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 51/161 (31%), Positives = 71/161 (44%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGYPSSGTDANM---E 73
+P ++ + VV+ IA G H LA T G VF WG G S G+ P + E
Sbjct: 144 IPQAIELLREKVVS-IAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKE 202
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + L V + AG HSA+ T G LY WG N GQ+ + L+ P +
Sbjct: 203 PSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLL---PQRIE- 258
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ F QN K+ V G H +A ++ G +Y QL
Sbjct: 259 ARCF--QNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQL 297
Score = 133 (51.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 40/137 (29%), Positives = 62/137 (45%)
Query: 43 ALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDG 102
A+ +F+WG S GQLG + + SG + +I+ GG HSA T +G
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGC-IKRITGGGGHSAVVTDEG 68
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
L+ G N GQ+G+ G + V++ P + VACG T+ L ++
Sbjct: 69 SLFVCGLNKDGQLGL-GHTEEVLYFT-PCK-----SLLGCAIQQVACGWDFTIILTENGQ 121
Query: 163 LWGCGWNEYNQLSMGCG 179
+ CG N + QL + G
Sbjct: 122 VLSCGSNSFGQLGVPHG 138
Score = 130 (50.8 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 49/167 (29%), Positives = 73/167 (43%)
Query: 8 GPLKMLSQVFHMPSRMDH--FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG--- 62
G L + +P R++ F + + + G+ H +A T G VF+WG GQLG
Sbjct: 242 GQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTV 301
Query: 63 -----YPSSGTDANME---PRE--IRALSGL-GVVQISAGGWHSAARTQDGFLYAWGWNN 111
+ S D ++ P++ L L G +IS G H+ A G ++WGWN
Sbjct: 302 ETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLA-VIGGVCHSWGWNE 360
Query: 112 GGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
G G + D V P P+ F + V CG+ H+LALC
Sbjct: 361 HGMCGDGTEAD--VWAPKPVPGLRFFLG-----LHVGCGAGHSLALC 400
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 39/136 (28%), Positives = 59/136 (43%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I G H +T EG +F G GQLG + P ++L G + Q++ G
Sbjct: 54 ITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWD 111
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
+ T++G + + G N+ GQ+GV H P + + KVV +A G RH
Sbjct: 112 FTIILTENGQVLSCGSNSFGQLGVP-------HGPRRCVIPQAIELLREKVVSIAAGLRH 164
Query: 154 TLALCDDNSL--WGCG 167
LA ++ WG G
Sbjct: 165 ALAATASGTVFQWGTG 180
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 162 (62.1 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 54/170 (31%), Positives = 78/170 (45%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P +D + V ++CG H L LT EG VFS GN + GQ G + E ++
Sbjct: 165 VPLPLDRPQETRVLQVSCGRAHSLILTDCEG-VFSMGNNAYGQCGRNVVENEIYSESHKV 223
Query: 78 RALSGLG--VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ VVQ+ G HS T G +Y+ GW GQ G+ G D + P +
Sbjct: 224 NRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGL-GHYD-ITSVPTKLGG-- 279
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
D + VV VA LA+ + L+G G +EY QL+ +QV+V
Sbjct: 280 --DLAGVNVVQVATYGDCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNV 327
Score = 158 (60.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 53/184 (28%), Positives = 82/184 (44%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQ-EGIVFSWGNGSR--GQLGYPSSGTDAN---- 71
+P R++ LD ++ ACG+ L ++ + + WG G QLG+ S D
Sbjct: 100 VPYRLE--LDQKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSHKDKTRGYE 157
Query: 72 --MEPREIRAL----SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV 125
+EP + V+Q+S G HS T +++ G N GQ G + +
Sbjct: 158 YVLEPSPVPLPLDRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIY 217
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
+ H ++ +DFD Q VV V CG H+L L D ++ CGW Q +G SV
Sbjct: 218 SESHKVNRMQDFDGQ---VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLG-HYDITSV 273
Query: 186 MTRL 189
T+L
Sbjct: 274 PTKL 277
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/150 (30%), Positives = 67/150 (44%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV-QIS 89
V +A D CLA++ EG +F WGN QL + T N+ PR + SG+G V Q +
Sbjct: 286 VVQVATYGDCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNV-PRCL-PFSGVGKVKQAA 343
Query: 90 AGGWHSAARTQDGFLYAWGWN--NGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
GG A +G ++ WG+ G VE V+ P + +F+ + V +
Sbjct: 344 CGGTGCAVLNGEGHVFVWGYGILGKGPNLVETAFPEVI--PPTLFGLTEFNP-GVHVSHI 400
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
CG H AL L+ G N L +G
Sbjct: 401 WCGLSHFAALTSKGELFVWGKNIRGCLGIG 430
Score = 122 (48.0 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 47/133 (35%), Positives = 60/133 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALS----GLG 84
V ACG C L EG VF WG G G+ G P+ A E P + L+ G+
Sbjct: 339 VKQAACGGTGCAVLNGEGHVFVWGYGILGK-G-PNLVETAFPEVIPPTLFGLTEFNPGVH 396
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V I G H AA T G L+ WG N G +G+ G+L+ D + W +
Sbjct: 397 VSHIWCGLSHFAALTSKGELFVWGKNIRGCLGI-GRLE----DQY-FPWRVTMPGEP--- 447
Query: 145 VDVACGSRHTLAL 157
VDVACG H + L
Sbjct: 448 VDVACGVDHMVTL 460
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 159 (61.0 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 48/148 (32%), Positives = 74/148 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG+D + LT+ G V S G+ S GQLG P G + P+ I + VV I+A
Sbjct: 103 IQQVACGWDFTIILTKNGQVLSCGSNSFGQLGVPH-GPRRCVVPQAIE-VQREKVVSIAA 160
Query: 91 GGWHSAARTQDGFLYAWGWN--NGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDV 147
G H+ A T G ++ WG + G+ G+ L L + P + + N + V V
Sbjct: 161 GLRHALAATASGLVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSKVTVGLE--NSQAVCV 218
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLS 175
GS H+ +L D L+ G N++ QL+
Sbjct: 219 LAGSGHSASLTDAGELYVWGSNKHGQLA 246
Score = 153 (58.9 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 51/150 (34%), Positives = 65/150 (43%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGYPSSGTDANM---EPREIRA-LSGLG 84
V IA G H LA T G+VF WG G S G+ P + EP ++ L
Sbjct: 155 VVSIAAGLRHALAATASGLVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQ 214
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V + AG HSA+ T G LY WG N GQ+ + L P P E QN KV
Sbjct: 215 AVCVLAGSGHSASLTDAGELYVWGSNKHGQLASQAAF-L----PLPQK-IEAHRFQNEKV 268
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V G H +A + ++ G +Y QL
Sbjct: 269 AAVWSGWTHLVAQTETGKVFTWGRADYGQL 298
Score = 130 (50.8 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 42/143 (29%), Positives = 66/143 (46%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ-ISAGGWHSAARTQDGFLYAWG 108
+F+WG S GQLG D + P+++ G V+ I+ GG HSA T G L+ G
Sbjct: 17 LFAWGANSYGQLGLGHK-EDVLL-PQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCG 74
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N GQ+G+ G + V++ + + + VACG T+ L + + CG
Sbjct: 75 LNKDGQLGL-GHTEDVLY----FTLCKSL--LGCPIQQVACGWDFTIILTKNGQVLSCGS 127
Query: 169 NEYNQLSMGCGVSQVSVMTRLSV 191
N + QL + G + V + V
Sbjct: 128 NSFGQLGVPHGPRRCVVPQAIEV 150
Score = 116 (45.9 bits), Expect = 0.00017, P = 0.00017
Identities = 42/152 (27%), Positives = 66/152 (43%)
Query: 19 MPSRMDHFLDL-VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++ F V I G H +T +G +F G GQLG T+ +
Sbjct: 38 LPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLNKDGQLGL--GHTEDVLYFTLC 95
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
++L G + Q++ G + T++G + + G N+ GQ+GV H P +
Sbjct: 96 KSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQLGVP-------HGPRRCVVPQAI 148
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
+ Q KVV +A G RH LA + WG G
Sbjct: 149 EVQREKVVSIAAGLRHALAATASGLVFQWGTG 180
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 163 (62.4 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 46/161 (28%), Positives = 78/161 (48%)
Query: 20 PSRMDHFLD----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P + FL+ + + +ACG LT GI+ ++G+GS G LG+ S TD + +P
Sbjct: 378 PQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSL-TDIS-QPT 435
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ AL G +VQ++ G H A + + L+AWG + G++G+ + PM +
Sbjct: 436 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQ 495
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ +Q V CG ++ L CG N +N+L +
Sbjct: 496 E--AQR-----VVCGIDSSMILTVPGQALACGSNRFNKLGL 529
Score = 123 (48.4 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 49/181 (27%), Positives = 83/181 (45%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
L G L +SQ P+ ++ L + +ACG H LAL+ E +F+WG G G+LG
Sbjct: 423 LGHGSLTDISQ----PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGL- 477
Query: 65 SSGT-DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
GT +++ P+++ G ++ G S T G A G N ++G++ L L
Sbjct: 478 --GTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLD-HLSL 534
Query: 124 VVHD-PHP-----MSW----SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
PH +S+ S D + + +D+ G+ H+ A+ + G N++ Q
Sbjct: 535 GEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDL--GTAHSAAVTASGDCYTFGSNQHGQ 592
Query: 174 L 174
L
Sbjct: 593 L 593
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 160 (61.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 48/144 (33%), Positives = 68/144 (47%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V G H + L+Q G V+S+G G LG +S + M P ++ VVQ+SA
Sbjct: 69 VVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSA 126
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+AA T+DG ++ WG GV G L+ + P+ D VV VA G
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNN-GVIGLLEPMKKSMVPVQVQLD-----APVVKVASG 180
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
+ H + L +D L+ G E QL
Sbjct: 181 NDHLVMLTNDGDLYTLGCGEQGQL 204
Score = 148 (57.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 49/162 (30%), Positives = 78/162 (48%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFL 104
T+ G+V + G G GQLG S + +P + L VVQ AGG H+ +Q G +
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERK-KPALVPLLQD--VVQAEAGGMHTVCLSQSGQV 88
Query: 105 YAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS-- 162
Y++G N+ G +G + ++ P + E KVV V+ G HT AL +D
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQE-------KVVQVSAGDSHTAALTEDGRVF 141
Query: 163 LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-NCPIVKL 203
LWG + + N + + + M + VP V+ + P+VK+
Sbjct: 142 LWG-SFRDNNGV-----IGLLEPMKKSMVPVQVQLDAPVVKV 177
Score = 137 (53.3 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 48/178 (26%), Positives = 81/178 (45%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-YPS--------SGTDANMEPREI 77
LD V +A G DH + LT +G +++ G G +GQLG P G + PR +
Sbjct: 170 LDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCV 229
Query: 78 RALS-GL-GVVQIS---AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
S G G V+ G + + A +++G +Y +G +N Q+G G + P ++
Sbjct: 230 LLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFI--PQNLT 287
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
F + V + G HT+ + + + G EY +L +G G + S+ T +S
Sbjct: 288 ---SFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS 342
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 161 (61.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 47/151 (31%), Positives = 76/151 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD---ANME-PREIRALSGLGVV 86
+ +A G H +ALT +G V+SWG G G+LG + +E P + + +V
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEG-DRIRIV 76
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL---VVHD--PHPMSWSEDFDS-- 139
++AG +HS A + DG ++ WG+N GQ+G +G+ L ++ + S S DS
Sbjct: 77 GVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLNDSGR 136
Query: 140 ---QNIKVVDVACGSRHTLALCDDNSLWGCG 167
++KV V GS +LA+ + LW G
Sbjct: 137 EVGSDLKVCTVKAGSMMSLAIDNVGGLWMWG 167
Score = 155 (59.6 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 32/90 (35%), Positives = 53/90 (58%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
++ ++AG H+ A T DG +Y+WG G++G + D +V P + + + I++
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELV--PVLVEFPNQAEGDRIRI 75
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
V VA G+ H+LA+ DD S+W G+N Y QL
Sbjct: 76 VGVAAGAYHSLAVSDDGSVWCWGYNIYGQL 105
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 51/179 (28%), Positives = 79/179 (44%)
Query: 29 LVVTDIACGFDHCLALTQE-------GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALS 81
L V DIACG H LT I +++G G GQLG+ S+ + + EP + L
Sbjct: 263 LTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEP--VSDLP 320
Query: 82 GLG-VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV--HDPHPMSWSEDFD 138
+V + G +H++ + +G++++WG G + + V D P S
Sbjct: 321 EHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGG-S 379
Query: 139 SQNIKVVDVACGSRHTLALCDDN-SLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
S+ V V+CG+ HT+ + D LW G L G VS V T + P +K
Sbjct: 380 SRFRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTG-NVSDCYVPTLVFWPNELK 437
Score = 127 (49.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 45/156 (28%), Positives = 65/156 (41%)
Query: 31 VTDIACGFDHCLALTQEG-----------IVFSWGNGSRGQLGYPSSGTDANMEPRE-IR 78
V +ACG +H +AL G +++SWGN GQLG + A + E
Sbjct: 199 VLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFN 258
Query: 79 ALSGLGVVQISAGGWHSAA-----RTQDGFLYAW--GWNNGGQVGVEGKLDLVVHDPHPM 131
SGL V I+ G H+A T G W G+ GQ+G + P P+
Sbjct: 259 QKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSL--PEPV 316
Query: 132 SWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
S D ++ +V V CG HT + + +W G
Sbjct: 317 S---DLP-EHAYLVSVDCGLFHTSVVSSEGYVWSWG 348
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 162 (62.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 46/161 (28%), Positives = 78/161 (48%)
Query: 20 PSRMDHFLD----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P + FL+ + + +ACG LT GI+ ++G+GS G LG+ S D + +P
Sbjct: 369 PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLN-DIS-QPT 426
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ AL G +VQ++ G H A + + L+AWG +GG++G+ + PM +
Sbjct: 427 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQ 486
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ +Q V CG ++ L CG N +N+L +
Sbjct: 487 E--AQR-----VVCGIDSSMILTVPGQALACGSNRFNKLGL 520
Score = 107 (42.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
L G L +SQ P+ ++ L + +ACG H LAL+ E +F+WG G G+LG
Sbjct: 414 LGHGSLNDISQ----PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGL- 468
Query: 65 SSGT-DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
GT +++ P+ + G ++ G S T G A G N ++G++ L L
Sbjct: 469 --GTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLD-PLSL 525
Query: 124 VVHDPHPMSWSED 136
+P P E+
Sbjct: 526 G-EEPAPHQQVEE 537
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSL--WGCG 167
Q IK+ VACG T+A+ + + WG G
Sbjct: 595 QGIKISTVACGDAFTVAIGAEGEVFSWGKG 624
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 162 (62.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 46/161 (28%), Positives = 78/161 (48%)
Query: 20 PSRMDHFLD----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P + FL+ + + +ACG LT GI+ ++G+GS G LG+ S D + +P
Sbjct: 373 PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLN-DIS-QPT 430
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ AL G +VQ++ G H A + + L+AWG +GG++G+ + PM +
Sbjct: 431 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQ 490
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ +Q V CG ++ L CG N +N+L +
Sbjct: 491 E--AQR-----VVCGIDSSMILTVPGQALACGSNRFNKLGL 524
Score = 107 (42.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
L G L +SQ P+ ++ L + +ACG H LAL+ E +F+WG G G+LG
Sbjct: 418 LGHGSLNDISQ----PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGL- 472
Query: 65 SSGT-DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
GT +++ P+ + G ++ G S T G A G N ++G++ L L
Sbjct: 473 --GTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLD-PLSL 529
Query: 124 VVHDPHPMSWSED 136
+P P E+
Sbjct: 530 G-EEPAPHQQVEE 541
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 140 QNIKVVDVACGSRHTLALCDDNSL--WGCG 167
Q IK+ VACG T+A+ + + WG G
Sbjct: 599 QGIKISTVACGDAFTVAIGAEGEVFSWGKG 628
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 162 (62.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 45/161 (27%), Positives = 77/161 (47%)
Query: 20 PSRMDHFLD----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P + FL+ + + +ACG LT GI+ ++G+GS G LG+ G + +P
Sbjct: 384 PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGH--GGLNDISQPT 441
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ AL G +VQ++ G H A + + L+AWG +GG++G+ + PM +
Sbjct: 442 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQ 501
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ +Q V CG ++ L CG N +N+L +
Sbjct: 502 E--AQR-----VICGIDSSVILTVPGQALACGSNRFNKLGL 535
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 51/191 (26%), Positives = 87/191 (45%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
L G L +SQ P+ ++ L + +ACG H LAL+ E +F+WG G G+LG
Sbjct: 429 LGHGGLNDISQ----PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGL- 483
Query: 65 SSGT-DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
GT +++ P+++ G ++ G S T G A G N ++G++ L L
Sbjct: 484 --GTRESHSCPQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLD-HLSL 540
Query: 124 ----VVHDP--HPMSW----SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQ 173
+H +++ S D + + VD+ G+ H+ A+ + G N++ Q
Sbjct: 541 GEEPALHQQVEEALNFTPLGSAPLDQEPLLSVDL--GTAHSAAVTASGDCYTFGSNQHGQ 598
Query: 174 LSMGCGVSQVS 184
L G +VS
Sbjct: 599 L--GTNARRVS 607
Score = 116 (45.9 bits), Expect = 0.00051, P = 0.00051
Identities = 31/119 (26%), Positives = 58/119 (48%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G H A+T G +++G+ GQLG ++ + P +++ L G+ + ++ G +
Sbjct: 575 GTAHSAAVTASGDCYTFGSNQHGQLG--TNARRVSRAPCQVQGLQGIKIAMVACGDAFTV 632
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTL 155
A +G +Y+WG G++G + D + P P+ E +Q V V+C +TL
Sbjct: 633 AIGAEGEVYSWGKGARGRLGRRDE-DAAL--PRPVQLDE---TQPYTVTSVSCCHGNTL 685
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 162 (62.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 46/161 (28%), Positives = 78/161 (48%)
Query: 20 PSRMDHFLD----LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR 75
P + FL+ + + +ACG LT GI+ ++G+GS G LG+ S D + +P
Sbjct: 386 PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLN-DIS-QPT 443
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
+ AL G +VQ++ G H A + + L+AWG +GG++G+ + PM +
Sbjct: 444 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQ 503
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
+ +Q V CG ++ L CG N +N+L +
Sbjct: 504 E--AQR-----VVCGIDSSMILTVPGQALACGSNRFNKLGL 537
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 54/192 (28%), Positives = 84/192 (43%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
L G L +SQ P+ ++ L + +ACG H LAL+ E +F+WG G G+LG
Sbjct: 431 LGHGSLNDISQ----PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGL- 485
Query: 65 SSGT-DANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
GT +++ P+ + G ++ G S T G A G N ++G++ L L
Sbjct: 486 --GTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLD-PLSL 542
Query: 124 VVHD-PH----------PMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYN 172
PH P+ S D + + VD+ G H+L L + G N++
Sbjct: 543 GEEPAPHQQVEEAVTFTPLG-SAPLDQEPLLSVDL--GPAHSLLLTASGDCYTFGSNQHG 599
Query: 173 QLSMGCGVSQVS 184
QL G +VS
Sbjct: 600 QL--GTNARRVS 609
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 155 (59.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 47/144 (32%), Positives = 67/144 (46%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V G H + L++ G V+S+G G LG +S + M P ++ VVQ+SA
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSA 126
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+AA T DG ++ WG GV G L+ + P+ D + VV VA G
Sbjct: 127 GDSHTAALTDDGRVFLWGSFRDNN-GVIGLLEPMKKSMVPVQVQLD-----VPVVKVASG 180
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
+ H + L D L+ G E QL
Sbjct: 181 NDHLVMLTADGDLYTLGCGEQGQL 204
Score = 143 (55.4 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 50/164 (30%), Positives = 79/164 (48%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL--GVVQISAGGWHSAARTQDG 102
T+ G+V + G G GQLG N+ R+ AL + VVQ AGG H+ ++ G
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGE-----NVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSG 86
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y++G N+ G +G + ++ P + E KVV V+ G HT AL DD
Sbjct: 87 QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE-------KVVQVSAGDSHTAALTDDGR 139
Query: 163 --LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-NCPIVKL 203
LWG + + N + + + M + VP V+ + P+VK+
Sbjct: 140 VFLWG-SFRDNNGV-----IGLLEPMKKSMVPVQVQLDVPVVKV 177
Score = 126 (49.4 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 44/169 (26%), Positives = 77/169 (45%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGN--GSRGQLGYPSSGTDANMEPRE 76
+P +++ L V ++ G H ALT +G VF WG+ + G +G +M P +
Sbjct: 111 VPGKVE--LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEP-MKKSMVPVQ 167
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-----------EGKLDLVV 125
++ + VV++++G H T DG LY G GQ+G +G L+V
Sbjct: 168 VQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLV 225
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P + +++ D CG+ T A+ + ++G G + Y+QL
Sbjct: 226 --PKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQL 272
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 159 (61.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 48/144 (33%), Positives = 67/144 (46%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V G H + L Q G V+S+G G LG +S + M P ++ VVQ+SA
Sbjct: 69 VVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSA 126
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+AA T+DG ++ WG GV G L+ + P+ D + VV VA G
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNN-GVIGLLEPMKKSMVPVQVQLD-----MPVVKVASG 180
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
+ H + L D L+ G E QL
Sbjct: 181 NDHLVMLTTDGDLYTLGCGEQGQL 204
Score = 146 (56.5 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 49/162 (30%), Positives = 77/162 (47%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFL 104
T+ G+V + G G GQLG S + +P + L VVQ AGG H+ Q G +
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERK-KPALVPLLQD--VVQAEAGGMHTVCLNQSGQV 88
Query: 105 YAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS-- 162
Y++G N+ G +G + ++ P + E KVV V+ G HT AL +D
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQE-------KVVQVSAGDSHTAALTEDGRVF 141
Query: 163 LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-NCPIVKL 203
LWG + + N + + + M + VP V+ + P+VK+
Sbjct: 142 LWG-SFRDNNGV-----IGLLEPMKKSMVPVQVQLDMPVVKV 177
Score = 144 (55.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 45/178 (25%), Positives = 84/178 (47%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANME----PREI 77
LD+ V +A G DH + LT +G +++ G G +GQLG + + G +E P+ +
Sbjct: 170 LDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV 229
Query: 78 --RALSGLGVVQIS---AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
++ G V+ G + + A +++G +Y +G +N Q+G G + P ++
Sbjct: 230 LLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFI--PQNLT 287
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
F + V + G HT+ + + + G EY +L +G G + S+ T +S
Sbjct: 288 ---SFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS 342
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 162 (62.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 42/144 (29%), Positives = 72/144 (50%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
++CG+ H +T G V+S+G + G+LG + + P+ + +L V+Q++ GG
Sbjct: 194 VSCGYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHS--VLQVACGGK 251
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ A T+D LY +G GQ+G+ G L V P + F + +V V CG +H
Sbjct: 252 HTLALTEDE-LYCFGGGEFGQLGL-GTLVFVADSPVAVG---HF--RKGRVTHVTCGEQH 304
Query: 154 TLALCDDNSLWGCGWNEYNQLSMG 177
+ + D L+ G + +L G
Sbjct: 305 SALITDSGLLYTFGDGRHGKLGHG 328
Score = 157 (60.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 44/144 (30%), Positives = 70/144 (48%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
+ACG DH L T +G + + G S GQLG + + +R +++ + G
Sbjct: 91 VACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQ--RLRPFCDYAPIKLLSAGD 148
Query: 94 H-SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H SAA T+DG L+ WG N+ GQ+G G +D H + E Q+I V +CG R
Sbjct: 149 HTSAALTEDGRLFLWGDNSAGQLGF-G------NDSHALLPKELNMGQSIHWV--SCGYR 199
Query: 153 HTLALCDDNSLWGCGWNEYNQLSM 176
H+ + D ++ G + +L +
Sbjct: 200 HSALVTDSGDVYSFGESADGRLGL 223
Score = 141 (54.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
++PSR+ D+ V I+CG H +T++G +F +G+ +RGQLG G +P +
Sbjct: 24 NVPSRLWLKSDIPV-HISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVT--KPVCV 80
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G ++ G H+ T G + A G N+ GQ+G+ G + D F
Sbjct: 81 KVLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGL-GHCN----DSISFQRLRPF 135
Query: 138 -DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
D IK++ + G + AL +D L+ G N QL G
Sbjct: 136 CDYAPIKLL--SAGDHTSAALTEDGRLFLWGDNSAGQLGFG 174
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 40/125 (32%), Positives = 58/125 (46%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V +ACG H LALT++ + + +G G GQLG + A+ P + V ++
Sbjct: 243 VLQVACGGKHTLALTEDEL-YCFGGGEFGQLGLGTLVFVAD-SPVAVGHFRKGRVTHVTC 300
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G HSA T G LY +G G++G G + + P F+ V+ VACG
Sbjct: 301 GEQHSALITDSGLLYTFGDGRHGKLG-HGDENFT-NQFTPTVCQRFFE---YSVMTVACG 355
Query: 151 SRHTL 155
S H L
Sbjct: 356 SSHML 360
Score = 44 (20.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVKNC 198
EY+ +++ CG S + V R E+ + C
Sbjct: 346 EYSVMTVACGSSHMLVFARPRQQENEEVC 374
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 163 (62.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 41/161 (25%), Positives = 76/161 (47%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPR 75
+ P ++ + ++CG D + +T EG ++++G+ G +G SG + +EP
Sbjct: 412 YRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEV-LEPM 470
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
++ V Q+S G H T++ +Y+WG G++G++ + D + P +
Sbjct: 471 QLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY--YTPQRV---- 524
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
D I +V V CG T L + CG NE+N+L +
Sbjct: 525 DVPKALI-IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGL 564
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 44/164 (26%), Positives = 80/164 (48%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ FL V ++CG +H + LT+ V+SWG G G+LG S + P+ +
Sbjct: 469 PMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE--EDYYTPQRVDV 526
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV-HDP-HPMSWSEDF 137
L +V + G + TQ G + A G N ++G+ + ++ H+ H + ++ F
Sbjct: 527 PKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSF 586
Query: 138 D-SQNI---KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ + K+ +A G HT A+ + L G N+ QL +G
Sbjct: 587 TLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG 630
Score = 143 (55.4 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 44/151 (29%), Positives = 76/151 (50%)
Query: 34 IACGFDHCLALTQEGIVFSWGN---GSR--GQLGYPSSGTDANM-EPREIRALSGLGVVQ 87
+ G H +T E +++W N G++ GQLG+ G A+ +P+ + L G + Q
Sbjct: 372 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGH---GDKASYRQPKHVEKLQGKAIHQ 428
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+S G + T +G LYA+G + G +GV+ V +P +++ F S ++ V
Sbjct: 429 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNF---FLSNPVE--QV 483
Query: 148 ACGSRHTLALCDDNSL--WGCGWNEYNQLSM 176
+CG H + L + + WGCG EY +L +
Sbjct: 484 SCGDNHVVVLTRNKEVYSWGCG--EYGRLGL 512
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 49/168 (29%), Positives = 74/168 (44%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS--SGTDANMEP 74
++ P R+D L++ + CG D LTQ G V + G +LG SG +
Sbjct: 518 YYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAY 577
Query: 75 REI---------RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLV 124
E+ + LS + I+ G H+AA + G L +G N GQ+GV K L
Sbjct: 578 HEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG 637
Query: 125 VHD-PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN 169
++ P+ + V+ V+CG T+A DDN + WG G N
Sbjct: 638 INLLGGPLGGKQ--------VIRVSCGDEFTIAATDDNHIFAWGNGGN 677
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 163 (62.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 39/160 (24%), Positives = 73/160 (45%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ + ++CG D + +T EG ++++G+ G +G +EP +
Sbjct: 414 YRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQ 473
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ V Q+S G H T++ +Y+WG G++G++ + D + P + D
Sbjct: 474 LNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY--YTPQKV----D 527
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I +V V CG T L + CG NE+N+L +
Sbjct: 528 VPKALI-IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGL 566
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 44/164 (26%), Positives = 82/164 (50%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ FL+ V ++CG +H + LT+ V+SWG G G+LG S + P+++
Sbjct: 471 PMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE--EDYYTPQKVDV 528
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV-HDP-HPMSWSEDF 137
L +V + G + TQ G + A G N ++G+ + ++ H+ H + ++ F
Sbjct: 529 PKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSF 588
Query: 138 D-SQNI---KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ + K+ +A G HT A+ + L G N+ QL +G
Sbjct: 589 TLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG 632
Score = 144 (55.7 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 45/151 (29%), Positives = 75/151 (49%)
Query: 34 IACGFDHCLALTQEGIVFSWGN---GSR--GQLGYPSSGTDANM-EPREIRALSGLGVVQ 87
+ G H +T E +++W N G++ GQLG+ G A+ +P+ + L G + Q
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGH---GDKASYRQPKHVEKLQGKAIRQ 430
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+S G + T +G LYA+G + G +GV+ V +P +++ F N V V
Sbjct: 431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF---F--LNNPVEQV 485
Query: 148 ACGSRHTLALCDDNSL--WGCGWNEYNQLSM 176
+CG H + L + + WGCG EY +L +
Sbjct: 486 SCGDNHVVVLTRNKEVYSWGCG--EYGRLGL 514
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 49/168 (29%), Positives = 74/168 (44%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS--SGTDANMEP 74
++ P ++D L++ + CG D LTQ G V + G +LG SG +
Sbjct: 520 YYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAY 579
Query: 75 REI---------RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLV 124
EI + LS + I+ G H+AA + G L +G N GQ+GV K L
Sbjct: 580 HEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG 639
Query: 125 VHD-PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN 169
++ P+ + V+ V+CG T+A DDN + WG G N
Sbjct: 640 INLLGGPLGGKQ--------VIRVSCGDEFTIAATDDNHIFAWGNGGN 679
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 163 (62.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 39/160 (24%), Positives = 73/160 (45%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P ++ + ++CG D + +T EG ++++G+ G +G +EP +
Sbjct: 414 YRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQ 473
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSED 136
+ V Q+S G H T++ +Y+WG G++G++ + D + P + D
Sbjct: 474 LNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY--YTPQKV----D 527
Query: 137 FDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
I +V V CG T L + CG NE+N+L +
Sbjct: 528 VPKALI-IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGL 566
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 44/164 (26%), Positives = 81/164 (49%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ FL V ++CG +H + LT+ V+SWG G G+LG S + P+++
Sbjct: 471 PMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE--EDYYTPQKVDV 528
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV-HDP-HPMSWSEDF 137
L +V + G + TQ G + A G N ++G+ + ++ H+ H + ++ F
Sbjct: 529 PKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSF 588
Query: 138 D-SQNI---KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ + K+ +A G HT A+ + L G N+ QL +G
Sbjct: 589 TLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG 632
Score = 144 (55.7 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 44/151 (29%), Positives = 76/151 (50%)
Query: 34 IACGFDHCLALTQEGIVFSWGN---GSR--GQLGYPSSGTDANM-EPREIRALSGLGVVQ 87
+ G H +T E +++W N G++ GQLG+ G A+ +P+ + L G + Q
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGH---GDKASYRQPKHVEKLQGKAIRQ 430
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+S G + T +G LYA+G + G +GV+ V +P +++ F S ++ V
Sbjct: 431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF---FLSNPVE--QV 485
Query: 148 ACGSRHTLALCDDNSL--WGCGWNEYNQLSM 176
+CG H + L + + WGCG EY +L +
Sbjct: 486 SCGDNHVVVLTRNKEVYSWGCG--EYGRLGL 514
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 48/168 (28%), Positives = 74/168 (44%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS--SGTDANMEP 74
++ P ++D L++ + CG D LTQ G V + G +LG SG +
Sbjct: 520 YYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAY 579
Query: 75 REI---------RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLV 124
E+ + LS + I+ G H+AA + G L +G N GQ+GV K L
Sbjct: 580 HEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG 639
Query: 125 VHD-PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN 169
++ P+ + V+ V+CG T+A DDN + WG G N
Sbjct: 640 INLLGGPLGGKQ--------VIRVSCGDEFTIAATDDNHIFAWGNGGN 679
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 155 (59.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 47/144 (32%), Positives = 67/144 (46%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V G H + L++ G V+S+G G LG +S + M P ++ VVQ+SA
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSA 126
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+AA T DG ++ WG GV G L+ + P+ D + VV VA G
Sbjct: 127 GDSHTAALTDDGRVFLWGSFRDNN-GVIGLLEPMKKSMVPVQVQLD-----VPVVKVASG 180
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
+ H + L D L+ G E QL
Sbjct: 181 NDHLVMLTADGDLYTLGCGEQGQL 204
Score = 143 (55.4 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 50/164 (30%), Positives = 79/164 (48%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL--GVVQISAGGWHSAARTQDG 102
T+ G+V + G G GQLG N+ R+ AL + VVQ AGG H+ ++ G
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGE-----NVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSG 86
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y++G N+ G +G + ++ P + E KVV V+ G HT AL DD
Sbjct: 87 QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE-------KVVQVSAGDSHTAALTDDGR 139
Query: 163 --LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-NCPIVKL 203
LWG + + N + + + M + VP V+ + P+VK+
Sbjct: 140 VFLWG-SFRDNNGV-----IGLLEPMKKSMVPVQVQLDVPVVKV 177
Score = 126 (49.4 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 44/169 (26%), Positives = 77/169 (45%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGN--GSRGQLGYPSSGTDANMEPRE 76
+P +++ L V ++ G H ALT +G VF WG+ + G +G +M P +
Sbjct: 111 VPGKVE--LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEP-MKKSMVPVQ 167
Query: 77 IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV-----------EGKLDLVV 125
++ + VV++++G H T DG LY G GQ+G +G L+V
Sbjct: 168 VQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLV 225
Query: 126 HDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
P + +++ D CG+ T A+ + ++G G + Y+QL
Sbjct: 226 --PKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQL 272
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 163 (62.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 41/161 (25%), Positives = 76/161 (47%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPR 75
+ P ++ + ++CG D + +T EG ++++G+ G +G SG + +EP
Sbjct: 414 YRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEV-LEPM 472
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
++ V Q+S G H T++ +Y+WG G++G++ + D + P +
Sbjct: 473 QLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY--YTPQRV---- 526
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
D I +V V CG T L + CG NE+N+L +
Sbjct: 527 DVPKALI-IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGL 566
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 44/164 (26%), Positives = 80/164 (48%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P +++ FL V ++CG +H + LT+ V+SWG G G+LG S + P+ +
Sbjct: 471 PMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE--EDYYTPQRVDV 528
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV-HDP-HPMSWSEDF 137
L +V + G + TQ G + A G N ++G+ + ++ H+ H + ++ F
Sbjct: 529 PKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSF 588
Query: 138 D-SQNI---KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ + K+ +A G HT A+ + L G N+ QL +G
Sbjct: 589 TLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG 632
Score = 143 (55.4 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 44/151 (29%), Positives = 76/151 (50%)
Query: 34 IACGFDHCLALTQEGIVFSWGN---GSR--GQLGYPSSGTDANM-EPREIRALSGLGVVQ 87
+ G H +T E +++W N G++ GQLG+ G A+ +P+ + L G + Q
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGH---GDKASYRQPKHVEKLQGKAIHQ 430
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+S G + T +G LYA+G + G +GV+ V +P +++ F S ++ V
Sbjct: 431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNF---FLSNPVE--QV 485
Query: 148 ACGSRHTLALCDDNSL--WGCGWNEYNQLSM 176
+CG H + L + + WGCG EY +L +
Sbjct: 486 SCGDNHVVVLTRNKEVYSWGCG--EYGRLGL 514
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 49/168 (29%), Positives = 74/168 (44%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS--SGTDANMEP 74
++ P R+D L++ + CG D LTQ G V + G +LG SG +
Sbjct: 520 YYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAY 579
Query: 75 REI---------RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLV 124
E+ + LS + I+ G H+AA + G L +G N GQ+GV K L
Sbjct: 580 HEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG 639
Query: 125 VHD-PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN 169
++ P+ + V+ V+CG T+A DDN + WG G N
Sbjct: 640 INLLGGPLGGKQ--------VIRVSCGDEFTIAATDDNHIFAWGNGGN 679
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 163 (62.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 46/164 (28%), Positives = 81/164 (49%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
P ++D FL V ++CG +H + LT+ V+SWG G G+LG S + P+++
Sbjct: 488 PMQLDFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE--EDYYTPQKVDV 545
Query: 80 LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVV-HDP-HPMSWSEDF 137
L +V + G + TQ G + A G N ++G+ + ++ H+ H + ++ F
Sbjct: 546 PKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSF 605
Query: 138 D-SQNI---KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
++ + K+ +A G HT AL + L G N+ QL +G
Sbjct: 606 TLAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVG 649
Score = 161 (61.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 40/161 (24%), Positives = 76/161 (47%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS-SGTDANMEPR 75
+ P ++ + ++CG D + +T EG ++++G+ G +G +G + +EP
Sbjct: 431 YRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEV-LEPM 489
Query: 76 EIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
++ V Q+S G H T++ +Y+WG G++G++ + D + P +
Sbjct: 490 QLDFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY--YTPQKV---- 543
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
D I +V V CG T L + CG NE+N+L +
Sbjct: 544 DVPKALI-IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGL 583
Score = 150 (57.9 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 46/151 (30%), Positives = 74/151 (49%)
Query: 34 IACGFDHCLALTQEGIVFSWGN---GSR--GQLGYPSSGTDANM-EPREIRALSGLGVVQ 87
+ G H +T E +++W N G++ GQLG+ G A+ +P+ + L G + Q
Sbjct: 391 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGH---GDKASYRQPKHVEKLQGKAIRQ 447
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDV 147
+S G + T +G LYA+G + G +GV+ V +P + DF N V V
Sbjct: 448 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQL----DFFLSN-PVEQV 502
Query: 148 ACGSRHTLALCDDNSL--WGCGWNEYNQLSM 176
+CG H + L + + WGCG EY +L +
Sbjct: 503 SCGDNHVVVLTRNKEVYSWGCG--EYGRLGL 531
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 48/168 (28%), Positives = 74/168 (44%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS--SGTDANMEP 74
++ P ++D L++ + CG D LTQ G V + G +LG SG +
Sbjct: 537 YYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAY 596
Query: 75 REI---------RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEG-KLDLV 124
E+ + LS + I+ G H+AA + G L +G N GQ+GV K L
Sbjct: 597 HEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLG 656
Query: 125 VHD-PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--WGCGWN 169
++ P+ + V+ V+CG T+A DDN + WG G N
Sbjct: 657 INLLGGPLGGKQ--------VIRVSCGDEFTIAATDDNHIFAWGNGGN 696
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 158 (60.7 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 49/167 (29%), Positives = 79/167 (47%)
Query: 20 PSRMDHFLDLVVTDIA--CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P+R+ + + + +A C HC+AL EG ++WG +GQLG+ P +
Sbjct: 47 PTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGH--GDMIQRDRPTVV 104
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV----EGKLDLVVHD-PHPMS 132
LS +V+ +AG H+ + DG +GWN GQ+G+ G + + V P P
Sbjct: 105 SGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCV 164
Query: 133 WSEDFDSQNIKVVDVACGSRHT--LALCDDNSLWGCGWNEYNQLSMG 177
S++ V +VACG+ T L+ + S+ G +Y QL G
Sbjct: 165 VSDE-------VTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHG 204
Score = 147 (56.8 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 61 LGYPSSGTDANM-EPREIRALSGLGVVQISAG--GWHSAARTQDGFLYAWGWNNGGQVGV 117
+G + N+ P +R L G+ + ++ G +H A +G Y WG N GQ+G
Sbjct: 33 IGKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLG- 91
Query: 118 EGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
G D++ D P S K+V A G HT+ + DD G GWN+Y QL +G
Sbjct: 92 HG--DMIQRD-RPTVVS---GLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLG 145
Score = 132 (51.5 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 46/154 (29%), Positives = 68/154 (44%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ--- 87
+ +ACG +H +A+ + G V++WG G G+LG+ + PR I V+
Sbjct: 237 IVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDE--WAPRRIDVFQRNNVLPPNA 294
Query: 88 -ISAGGWHSAARTQDGFLYAWGW--NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
+SAG +SA G LY WG NNG D + P PM D N++
Sbjct: 295 ILSAGSANSACTAGGGQLYMWGKIKNNGD--------DWMY--PKPMM---DLSGWNLRW 341
Query: 145 VDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMG 177
+D GS H D + + WG +Y +L G
Sbjct: 342 MD--SGSMHHFVGADSSCISWGHA--QYGELGYG 371
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 155 (59.6 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 47/144 (32%), Positives = 67/144 (46%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V G H + L++ G V+S+G G LG +S + M P ++ VVQ+SA
Sbjct: 86 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSA 143
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+AA T DG ++ WG GV G L+ + P+ D + VV VA G
Sbjct: 144 GDSHTAALTDDGRVFLWGSFRDNN-GVIGLLEPMKKSMVPVQVQLD-----VPVVKVASG 197
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
+ H + L D L+ G E QL
Sbjct: 198 NDHLVMLTADGDLYTLGCGEQGQL 221
Score = 149 (57.5 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 52/174 (29%), Positives = 82/174 (47%)
Query: 35 ACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL--GVVQISAGG 92
+C H T+ G+V + G G GQLG N+ R+ AL + VVQ AGG
Sbjct: 39 SCQVSHRSHSTEPGLVLTLGQGDVGQLGLGE-----NVMERKKPALVSIPEDVVQAEAGG 93
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSR 152
H+ ++ G +Y++G N+ G +G + ++ P + E KVV V+ G
Sbjct: 94 MHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE-------KVVQVSAGDS 146
Query: 153 HTLALCDDNS--LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-NCPIVKL 203
HT AL DD LWG + + N + + + M + VP V+ + P+VK+
Sbjct: 147 HTAALTDDGRVFLWG-SFRDNNGV-----IGLLEPMKKSMVPVQVQLDVPVVKV 194
Score = 142 (55.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 45/178 (25%), Positives = 83/178 (46%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANME----PR-- 75
LD+ V +A G DH + LT +G +++ G G +GQLG + + G +E P+
Sbjct: 187 LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV 246
Query: 76 EIRALSGLGVVQIS---AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+++ G V+ G + + A + +G +Y +G +N Q+G G + P ++
Sbjct: 247 MLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFI--PQNLT 304
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
F + V + G HT+ + + + G EY +L +G G + S+ T +S
Sbjct: 305 ---SFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS 359
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 148 (57.2 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 51/161 (31%), Positives = 71/161 (44%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGYPSSGTD---ANME 73
+P ++ + VV IA G H +A T GIVF WG G S G+ P E
Sbjct: 30 VPQAIELHKEKVVC-IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE 88
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + L + + AG HSA+ T G +Y WG N GQ+ E L V P +
Sbjct: 89 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAF-LPV--PQKIE- 144
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ F QN KV + G H +A + ++ G +Y QL
Sbjct: 145 AHCF--QNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQL 183
Score = 123 (48.4 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 45/135 (33%), Positives = 65/135 (48%)
Query: 44 LTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGF 103
LT+ G V S G+ S GQLG P G + P+ I L VV I+AG H+ A T G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPH-GPRRCVVPQAIE-LHKEKVVCIAAGLRHAVAATASGI 59
Query: 104 LYAWGWN--NGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
++ WG + G+ G+ L L P S +N K + V GS H+ +L D
Sbjct: 60 VFQWGTGLASCGRRLCPGQTLPLFFTAKEP---SRVTGLENSKAMCVLAGSDHSASLTDA 116
Query: 161 NSLWGCGWNEYNQLS 175
++ G N++ QL+
Sbjct: 117 GEVYVWGSNKHGQLA 131
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PSR+ + + G DH +LT G V+ WG+ GQL ++ P++I A
Sbjct: 89 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPV---PQKIEA 145
Query: 80 --LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
V I +G H A+T+ G ++ WG + GQ+G
Sbjct: 146 HCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 184
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 155 (59.6 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 47/144 (32%), Positives = 67/144 (46%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V G H + L++ G V+S+G G LG +S + M P ++ VVQ+SA
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSA 126
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+AA T DG ++ WG GV G L+ + P+ D + VV VA G
Sbjct: 127 GDSHTAALTDDGRVFLWGSFRDNN-GVIGLLEPMKKSMVPVQVQLD-----VPVVKVASG 180
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
+ H + L D L+ G E QL
Sbjct: 181 NDHLVMLTADGDLYTLGCGEQGQL 204
Score = 143 (55.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 50/164 (30%), Positives = 79/164 (48%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL--GVVQISAGGWHSAARTQDG 102
T+ G+V + G G GQLG N+ R+ AL + VVQ AGG H+ ++ G
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGE-----NVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSG 86
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y++G N+ G +G + ++ P + E KVV V+ G HT AL DD
Sbjct: 87 QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE-------KVVQVSAGDSHTAALTDDGR 139
Query: 163 --LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-NCPIVKL 203
LWG + + N + + + M + VP V+ + P+VK+
Sbjct: 140 VFLWG-SFRDNNGV-----IGLLEPMKKSMVPVQVQLDVPVVKV 177
Score = 142 (55.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 45/178 (25%), Positives = 83/178 (46%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANME----PR-- 75
LD+ V +A G DH + LT +G +++ G G +GQLG + + G +E P+
Sbjct: 170 LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV 229
Query: 76 EIRALSGLGVVQIS---AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+++ G V+ G + + A + +G +Y +G +N Q+G G + P ++
Sbjct: 230 MLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFI--PQNLT 287
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
F + V + G HT+ + + + G EY +L +G G + S+ T +S
Sbjct: 288 ---SFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS 342
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 153 (58.9 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 49/148 (33%), Positives = 73/148 (49%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG+D + LT+ G V S G+ S GQLG P G + P+ I L VV I+A
Sbjct: 103 IQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPH-GPRRCVVPQAIE-LHKEKVVCIAA 160
Query: 91 GGWHSAARTQDGFLYAWGWN--NGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDV 147
G H+ A T G ++ WG + G+ G+ L L P S +N K + V
Sbjct: 161 GLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEP---SRVTGLENSKAMCV 217
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLS 175
GS H+ +L D ++ G N++ QL+
Sbjct: 218 LAGSDHSASLTDAGEVYVWGSNKHGQLA 245
Score = 148 (57.2 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 51/161 (31%), Positives = 71/161 (44%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGYPSSGTD---ANME 73
+P ++ + VV IA G H +A T GIVF WG G S G+ P E
Sbjct: 144 VPQAIELHKEKVVC-IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE 202
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + L + + AG HSA+ T G +Y WG N GQ+ E L V P +
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAF-LPV--PQKIE- 258
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ F QN KV + G H +A + ++ G +Y QL
Sbjct: 259 AHCF--QNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQL 297
Score = 129 (50.5 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 39/131 (29%), Positives = 59/131 (45%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRAL-SGLGVVQISAGGWHSAARTQDGFLYAWG 108
+F+WG S GQLG D + P+++ V +I+ GG HSA T G L+ G
Sbjct: 17 LFAWGANSYGQLGLGHK-EDVLL-PQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCG 74
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N GQ+G+ D+ P + + VACG T+ L ++ + CG
Sbjct: 75 LNKDGQLGLGHTEDIPYFTPCKSLFG-------CPIQQVACGWDFTIMLTENGQVLSCGS 127
Query: 169 NEYNQLSMGCG 179
N + QL + G
Sbjct: 128 NSFGQLGVPHG 138
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PSR+ + + G DH +LT G V+ WG+ GQL ++ P++I A
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPV---PQKIEA 259
Query: 80 --LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
V I +G H A+T+ G ++ WG + GQ+G
Sbjct: 260 HCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 160 (61.4 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 51/179 (28%), Positives = 82/179 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDAN----MEPREIRALSGLGVV 86
V I+ H LALT+ G ++SWG G+LG + + + PR I A ++
Sbjct: 249 VIQISVSHTHSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISAFKDYQII 308
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
++AG +S A T D +Y+WG NNG Q+G+ + VV P ++ V+
Sbjct: 309 GMAAGKSYSVAWT-DTDIYSWGLNNG-QLGISDHIS-VVSTPRRVAGLLS------PVIH 359
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
C +R T+ L +NS+ + YNQ+ + V S + P + + KL A
Sbjct: 360 AVCTTRATICLLQNNSI--IAFCNYNQVKLPFNVDFGSSLKVTKHPLSLTRFNVRKLLA 416
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/164 (26%), Positives = 81/164 (49%)
Query: 31 VTDIACGFDHCLALTQEGI--VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL--GVV 86
+ D+ H + LT E V+ G G+ G++G+ ++ N P + G+ V+
Sbjct: 197 ILDVQASKFHSVVLTDEPSQNVYVCGIGAGGRIGF-NTDVQYNFIP-----IPGIIHKVI 250
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
QIS HS A T+ G +Y+WG N G++G+ +L DP ++ ++ +++
Sbjct: 251 QISVSHTHSLALTKFGSIYSWGKNGSGELGLSND-ELKKDDPIQITPRRISAFKDYQIIG 309
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
+A G +++A D + ++ G N QL + +S VS R++
Sbjct: 310 MAAGKSYSVAWTDTD-IYSWGLNN-GQLGISDHISVVSTPRRVA 351
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 151 (58.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 51/166 (30%), Positives = 68/166 (40%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGYPSSGTDANM---E 73
+P ++ + VV +A G H LA T G F WG G S G+ P + E
Sbjct: 144 VPQAIECLREKVVC-VAAGLRHALATTDTGSTFQWGTGLASSGRRLCPGQNLPLFLTAKE 202
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + L VV AG HSA+ T G LY WG N GQ+ L P P
Sbjct: 203 PSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGRNKHGQLA-----SLATFLPLPQRV 257
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCG 179
+ Q+ KV V G H +A + ++ G +Y QL G
Sbjct: 258 EAHY-FQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRTLG 302
Score = 151 (58.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 52/169 (30%), Positives = 82/169 (48%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG+D + LT++G V S G+ + GQLG P G + P+ I L VV ++A
Sbjct: 103 IRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPH-GPRKCVVPQAIECLREK-VVCVAA 160
Query: 91 GGWHSAARTQDGFLYAWGWN--NGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDV 147
G H+ A T G + WG + G+ G+ L L + P S ++ VV
Sbjct: 161 GLRHALATTDTGSTFQWGTGLASSGRRLCPGQNLPLFLTAKEP---SRVTGLESSTVVCA 217
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK 196
GS H+ +L D L+ G N++ QL+ S+ T L +P+ V+
Sbjct: 218 VAGSDHSASLTDTGELYVWGRNKHGQLA--------SLATFLPLPQRVE 258
Score = 128 (50.1 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 43 ALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ-ISAGGWHSAARTQD 101
A++ ++F+WG S GQLG D + P+++ G ++ ++ GG HS T
Sbjct: 10 AVSAAAVLFAWGANSYGQLGLGHK-EDVLL-PQQLSDFCKSGCIKSVTGGGGHSVVVTDG 67
Query: 102 GFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDN 161
G L+ G N GQ+G+ G H + ++ + VACG T+ L +
Sbjct: 68 GGLFVCGLNKDGQLGL-G------HTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKG 120
Query: 162 SLWGCGWNEYNQLSMGCG 179
+ CG N + QL + G
Sbjct: 121 QVLSCGSNAFGQLGVPHG 138
Score = 113 (44.8 bits), Expect = 0.00038, P = 0.00038
Identities = 42/152 (27%), Positives = 63/152 (41%)
Query: 19 MPSRMDHFLDL-VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
+P ++ F + + G H + +T G +F G GQLG T+ +
Sbjct: 38 LPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLNKDGQLGL--GHTEEVLRFTIC 95
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
+ L G + Q++ G + T+ G + + G N GQ+GV H P +
Sbjct: 96 KPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVP-------HGPRKCVVPQAI 148
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSL--WGCG 167
+ KVV VA G RH LA D S WG G
Sbjct: 149 ECLREKVVCVAAGLRHALATTDTGSTFQWGTG 180
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 133 (51.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/151 (32%), Positives = 65/151 (43%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGYPSSGTD---ANME 73
+P ++ + VV IA G H +A T GIVF WG G S G+ P E
Sbjct: 30 VPQAIELHKEKVVC-IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE 88
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + L + + AG HSA+ T G +Y WG N GQ+ E L V P +
Sbjct: 89 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAF-LPV--PQKIE- 144
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLW 164
+ F QN KV + G H +A LW
Sbjct: 145 AHCF--QNEKVTAIWSGWTHLVA--QTGLLW 171
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 45/135 (33%), Positives = 65/135 (48%)
Query: 44 LTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGF 103
LT+ G V S G+ S GQLG P G + P+ I L VV I+AG H+ A T G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPH-GPRRCVVPQAIE-LHKEKVVCIAAGLRHAVAATASGI 59
Query: 104 LYAWGWN--NGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
++ WG + G+ G+ L L P S +N K + V GS H+ +L D
Sbjct: 60 VFQWGTGLASCGRRLCPGQTLPLFFTAKEP---SRVTGLENSKAMCVLAGSDHSASLTDA 116
Query: 161 NSLWGCGWNEYNQLS 175
++ G N++ QL+
Sbjct: 117 GEVYVWGSNKHGQLA 131
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 153 (58.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/148 (33%), Positives = 73/148 (49%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG+D + LT+ G V S G+ S GQLG P G + P+ I L VV I+A
Sbjct: 103 IQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPH-GPRRCVVPQAIE-LHKEKVVCIAA 160
Query: 91 GGWHSAARTQDGFLYAWGWN--NGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDV 147
G H+ A T G ++ WG + G+ G+ L L P S +N K + V
Sbjct: 161 GLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEP---SRVTGLENSKAMCV 217
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLS 175
GS H+ +L D ++ G N++ QL+
Sbjct: 218 LAGSDHSASLTDAGEVYVWGSNKHGQLA 245
Score = 148 (57.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 51/161 (31%), Positives = 71/161 (44%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGYPSSGTD---ANME 73
+P ++ + VV IA G H +A T GIVF WG G S G+ P E
Sbjct: 144 VPQAIELHKEKVVC-IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE 202
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + L + + AG HSA+ T G +Y WG N GQ+ E L V P +
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAF-LPV--PQKIE- 258
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ F QN KV + G H +A + ++ G +Y QL
Sbjct: 259 AHCF--QNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQL 297
Score = 131 (51.2 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 49/158 (31%), Positives = 71/158 (44%)
Query: 19 MPSRMD-H-FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPS---SGT 68
+P +++ H F + VT I G+ H +A T+ G +F+WG GQLG Y
Sbjct: 253 VPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQ 312
Query: 69 DA--------NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
D+ N P L+G ++S G H+ A G Y+WGWN G G +G
Sbjct: 313 DSFLPCSRPPNSMPSSPHCLTG--ATEVSCGSEHNLAII-GGVCYSWGWNEHGMCG-DGT 368
Query: 121 LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
+ V P P+ S + V CG+ H+LALC
Sbjct: 369 -EANVWAPKPVQAL--LSSSGLLV---GCGAGHSLALC 400
Score = 129 (50.5 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 39/131 (29%), Positives = 59/131 (45%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRAL-SGLGVVQISAGGWHSAARTQDGFLYAWG 108
+F+WG S GQLG D + P+++ V +I+ GG HSA T G L+ G
Sbjct: 17 LFAWGANSYGQLGLGHK-EDVLL-PQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCG 74
Query: 109 WNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGW 168
N GQ+G+ D+ P + + VACG T+ L ++ + CG
Sbjct: 75 LNKDGQLGLGHTEDIPYFTPCKSLFG-------CPIQQVACGWDFTIMLTENGQVLSCGS 127
Query: 169 NEYNQLSMGCG 179
N + QL + G
Sbjct: 128 NSFGQLGVPHG 138
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 52/176 (29%), Positives = 76/176 (43%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG +H LT+ G VF++G GS GQLG+ S + N PR + L G V QI+
Sbjct: 59 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIAC 116
Query: 91 GGWHSAART-QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW-------SEDFDSQNI 142
G H+ A G +YA+G GQ+G ++ P W S D
Sbjct: 117 GRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKY 176
Query: 143 KVV-DVACGSRHTLALCD--DNSLWGCGWNEYNQLSMGCGVSQVSVMT-RLSVPEH 194
+V + G T LC +NS + NQ ++ ++ R + EH
Sbjct: 177 HIVKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEH 232
Score = 151 (58.2 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 48/139 (34%), Positives = 66/139 (47%)
Query: 47 EGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYA 106
EG VF WG + GQLG S + P ++ L VV IS G H+A T+ G ++
Sbjct: 23 EGAVFGWGMNNAGQLGL--SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 80
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--- 163
+G + GQ+G + D V +P E S+ V +ACG +HTLA + L
Sbjct: 81 FGAGSCGQLGHDSMNDEV----NPRRVLELMGSE---VTQIACGRQHTLAFVPSSGLIYA 133
Query: 164 WGCGWNEYNQLSMG--CGV 180
+GCG QL G C V
Sbjct: 134 FGCGAK--GQLGTGHTCNV 150
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 132 (51.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 47/143 (32%), Positives = 63/143 (44%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGYPSSGTD---ANME 73
+P ++ + VV IA G H +A T GIVF WG G S G+ P E
Sbjct: 30 VPQAIELHKEKVVC-IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE 88
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
P + L + + AG HSA+ T G +Y WG N GQ+ E L V P +
Sbjct: 89 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAF-LPV--PQKIE- 144
Query: 134 SEDFDSQNIKVVDVACGSRHTLA 156
+ F QN KV + G H +A
Sbjct: 145 AHCF--QNEKVTAIWSGWTHLVA 165
Score = 123 (48.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 45/135 (33%), Positives = 65/135 (48%)
Query: 44 LTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGF 103
LT+ G V S G+ S GQLG P G + P+ I L VV I+AG H+ A T G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPH-GPRRCVVPQAIE-LHKEKVVCIAAGLRHAVAATASGI 59
Query: 104 LYAWGWN--NGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
++ WG + G+ G+ L L P S +N K + V GS H+ +L D
Sbjct: 60 VFQWGTGLASCGRRLCPGQTLPLFFTAKEP---SRVTGLENSKAMCVLAGSDHSASLTDA 116
Query: 161 NSLWGCGWNEYNQLS 175
++ G N++ QL+
Sbjct: 117 GEVYVWGSNKHGQLA 131
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 152 (58.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 47/148 (31%), Positives = 73/148 (49%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +ACG+D + LT++G V S G+ + GQLG P G + P+ I L VV ++A
Sbjct: 103 IRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPH-GPRKCVVPQAIECLREK-VVCVAA 160
Query: 91 GGWHSAARTQDGFLYAWGWN--NGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDV 147
G H+ A T G ++ WG + G+ G+ L L + P S +N V
Sbjct: 161 GLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEP---SRVTGLENSTAVCA 217
Query: 148 ACGSRHTLALCDDNSLWGCGWNEYNQLS 175
GS H+ +L D L+ G N++ QL+
Sbjct: 218 VAGSDHSASLTDTGELYVWGRNKHGQLA 245
Score = 145 (56.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 50/167 (29%), Positives = 75/167 (44%)
Query: 8 GPLKMLSQVFHMPSRMD--HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPS 65
G L + +P R++ +F D VT + G+ H +A T+ G VF+WG GQLG
Sbjct: 242 GQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRL 301
Query: 66 SGTDAN--MEPREIRALSG------------LGVVQISAGGWHSAARTQDGFLYAWGWNN 111
+A +E A G G +IS G H+ A +D +WGWN
Sbjct: 302 EPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCC-SWGWNE 360
Query: 112 GGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
G G +G + V P P+ S +++ V CG+ H+LA+C
Sbjct: 361 HGMCG-DGT-ESNVWTPTPVQALPPSPS---RLLLVGCGAGHSLAVC 402
Score = 132 (51.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 49 IVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ-ISAGGWHSAARTQDGFLYAW 107
++F+WG S GQLG D + P+++ G ++ ++ GG HSA T G L+
Sbjct: 16 VLFAWGANSYGQLGLGHK-EDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVC 73
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCG 167
G N GQ+G+ G H + ++ + + VACG T+ L + + CG
Sbjct: 74 GLNKDGQLGL-G------HTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCG 126
Query: 168 WNEYNQLSMGCG 179
N + QL + G
Sbjct: 127 SNAFGQLGVPHG 138
Score = 132 (51.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 57/213 (26%), Positives = 84/213 (39%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPR-EIR 78
PSR+ + G DH +LT G ++ WG GQL S + R E
Sbjct: 203 PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLA--SRAVFLPLPQRIEAH 260
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLV-VHDPHPMSWSEDF 137
V + +G H A+T+ G ++ WG + GQ+G +L+ P S F
Sbjct: 261 YFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG--RRLEPPEAQKPVEQDSSLAF 318
Query: 138 DS-QN---------IKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMGCGVSQVSVM 186
QN +++CGS H LA+ D WG WNE+ G S V
Sbjct: 319 QGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCCSWG--WNEHGMCGDGTE-SNVWTP 375
Query: 187 TRL-SVPEHVKNCPIVKLFAEHWNSARLSVPEH 218
T + ++P +V A H + A +P H
Sbjct: 376 TPVQALPPSPSRLLLVGCGAGH-SLAVCQLPAH 407
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 152 (58.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 45/169 (26%), Positives = 83/169 (49%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G H +A+T +G V+++G + GQLG+ + +A ++P +R+L G+ ++Q +AG +
Sbjct: 151 GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQP--VRSLQGVRIIQAAAGAARTM 208
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
+ DG +YA G + G+ G+ V P ++ +NI VV A G+ T
Sbjct: 209 LISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVT-----SLKNIFVVQAAIGNYFTAV 263
Query: 157 LCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFA 205
L + ++ W +L + V L P ++N P+V++ A
Sbjct: 264 LSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLG-P--LENVPVVQIAA 309
Score = 151 (58.2 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 42/151 (27%), Positives = 75/151 (49%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ A G + ++ +G V++ G S G+ Y GT P+ + +L + VVQ +
Sbjct: 197 IIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAI 256
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G + +A +++G +Y + W N G++G + + V +P P+ +N+ VV +A G
Sbjct: 257 GNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADV--EPRPLLGP----LENVPVVQIAAG 310
Query: 151 SRHTLAL-CDDNSLWGCGWNEYNQLSMGCGV 180
+ LAL C N G + Y S+GCG+
Sbjct: 311 YCYLLALACQPN-----GMSVY---SVGCGL 333
Score = 140 (54.3 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 49/144 (34%), Positives = 69/144 (47%)
Query: 31 VTDIACGFDHCLALTQE--GI-VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
V IA G+ + LAL + G+ V+S G G G+LG+ S TD PR I L +
Sbjct: 304 VVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGH-GSRTDEKY-PRVIEQFQILNLQP 361
Query: 88 --ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
++AG WH+A QDG + WGW G +G G + + P E ++K V
Sbjct: 362 RVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEEC---ESVPKV-VEGLS--HVKAV 414
Query: 146 DVACGSRHTLALCDDNSLW--GCG 167
VA G T + DD ++ GCG
Sbjct: 415 HVATGDYTTFVVSDDGDVYSFGCG 438
Score = 135 (52.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 49/164 (29%), Positives = 76/164 (46%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIV--FSWGNGSRGQLGYPSSGTDANMEPREI 77
P + ++ V A G L++EG V FSWGN G+LG+ + D +EPR +
Sbjct: 240 PQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGND--GRLGHQTEAAD--VEPRPL 295
Query: 78 RA-LSGLGVVQISAGGWH--SAARTQDGF-LYAWGWNNGGQVGVEGKLDLVVHDPHPMSW 133
L + VVQI+AG + + A +G +Y+ G GG++G + D + +P
Sbjct: 296 LGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTD----EKYPRV- 350
Query: 134 SEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
E F N++ VA G+ H + D + GW Y L G
Sbjct: 351 IEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 394
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 36/128 (28%), Positives = 57/128 (44%)
Query: 87 QISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
Q AG HS A T G +Y +G+NN GQ+G G H Q ++++
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLG-HG------HTEDEARIQPVRSLQGVRIIQ 199
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAE 206
A G+ T+ + DD ++ CG + + G G V T V +KN +V+
Sbjct: 200 AAAGAARTMLISDDGKVYACGKESFGEAEYG-GQGTKPVTTPQLVTS-LKNIFVVQAAIG 257
Query: 207 HWNSARLS 214
++ +A LS
Sbjct: 258 NYFTAVLS 265
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 39/173 (22%), Positives = 76/173 (43%)
Query: 20 PSRMDHF--LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
P ++ F L+L +A G H + Q+G V +WG G G LG+ + + P+ +
Sbjct: 348 PRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE--ECESVPKVV 405
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG------VEGKLDLVVHDPHPM 131
LS + V ++ G + + + DG +Y++G +G +G V P +
Sbjct: 406 EGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVV 465
Query: 132 SWSEDFDSQNIKV--VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQ 182
+ + + + +++ + + HT AL + L+ G + QL G +Q
Sbjct: 466 TSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQ 518
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 147 (56.8 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 49/149 (32%), Positives = 65/149 (43%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGYPSSGTD---ANMEPREIRALSGLGV 85
V IA G H +A T GIVF WG G S G+ P EP + L
Sbjct: 19 VVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKA 78
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVV 145
+ + AG HSA+ T G +Y WG N GQ+ E L V P + + F QN KV
Sbjct: 79 MCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAF-LPV--PQKIE-AHCF--QNEKVT 132
Query: 146 DVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+ G H +A + ++ G +Y QL
Sbjct: 133 AIWSGWTHLVAQTETGKMFTWGRADYGQL 161
Score = 143 (55.4 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 47/169 (27%), Positives = 71/169 (42%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRA 79
PSR+ + + G DH +LT G V+ WG+ GQL ++ P++I A
Sbjct: 67 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPV---PQKIEA 123
Query: 80 --LSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-----VEG----KLDLVVHDP 128
V I +G H A+T+ G ++ WG + GQ+G EG K D +
Sbjct: 124 HCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCS 183
Query: 129 HPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMG 177
P + +V+CGS H LA+ + GWNE+ G
Sbjct: 184 RPPNSMPSSPHCLTGATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDG 231
Score = 131 (51.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 49/158 (31%), Positives = 71/158 (44%)
Query: 19 MPSRMD-H-FLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPS---SGT 68
+P +++ H F + VT I G+ H +A T+ G +F+WG GQLG Y
Sbjct: 117 VPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQ 176
Query: 69 DA--------NMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGK 120
D+ N P L+G ++S G H+ A G Y+WGWN G G +G
Sbjct: 177 DSFLPCSRPPNSMPSSPHCLTG--ATEVSCGSEHNLAII-GGVCYSWGWNEHGMCG-DGT 232
Query: 121 LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
+ V P P+ S + V CG+ H+LALC
Sbjct: 233 -EANVWAPKPVQAL--LSSSGLLV---GCGAGHSLALC 264
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 152 (58.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 48/155 (30%), Positives = 75/155 (48%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ +A G A+T++G +F WG+ S GQ+G T ++ P ++ G V IS
Sbjct: 144 IKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADK-TCVSV-PCQVDV--GKPVSSISC 199
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G +HSA T DG LY +G G++G+ + P P+ + KV VACG
Sbjct: 200 GYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME------KVNKVACG 253
Query: 151 SRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSV 185
HT+ L + ++ G +Y QL G + + SV
Sbjct: 254 GEHTVVLTE-TGVYTFGLGQYGQLGHGTLLFKTSV 287
Score = 148 (57.2 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 45/147 (30%), Positives = 72/147 (48%)
Query: 32 TDIA-CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV-QIS 89
T +A CG +H L T++G V++ G S GQLG T+ I + + Q++
Sbjct: 91 TKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGL--GDTEERTTFHLISFFTNQHKIKQLA 148
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG + SAA T+DG L+ WG N+ GQ+G+ K + V P + + S ++C
Sbjct: 149 AGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSV--PCQVDVGKPVSS-------ISC 199
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSM 176
G H+ + D L+ G E +L +
Sbjct: 200 GYYHSAFITGDGELYTFGEPENGKLGL 226
Score = 135 (52.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 46/164 (28%), Positives = 80/164 (48%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGW 93
I+CG +H +T G ++ +G+ GQLG S T +P ++AL G
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVR--KPTCVKALKPEKTKLAVCGRN 99
Query: 94 HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRH 153
H+ T+ G +YA G N+ GQ+G+ + H +S+ F +Q+ K+ +A GS
Sbjct: 100 HTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTF--HLISF---FTNQH-KIKQLAAGSYT 153
Query: 154 TLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
+ A+ +D L+ G N Q+ + + VSV ++ V + V +
Sbjct: 154 SAAVTEDGQLFVWGDNSEGQIGLA-DKTCVSVPCQVDVGKPVSS 196
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/149 (25%), Positives = 71/149 (47%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V+ I+CG+ H +T +G ++++G G+LG + P+ + + V +++
Sbjct: 194 VSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEK-VNKVAC 252
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ T+ G +Y +G GQ+G G L P + ++ K+ +V CG
Sbjct: 253 GGEHTVVLTETG-VYTFGLGQYGQLG-HGTLLFKTSVPKSVK-----HLRSHKIHNVTCG 305
Query: 151 SRHTLALCD-DNSL-WGCGWNEYNQLSMG 177
HT + D +N L + G + +L +G
Sbjct: 306 ESHTAVIADTENGLMFTFGDGRHGKLGLG 334
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 149 (57.5 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 45/144 (31%), Positives = 68/144 (47%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ G H + L++ G V+S+G G LG +S + M P ++ VVQ+SA
Sbjct: 69 IVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSA 126
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+AA T+DG ++ WG GV G L+ + P+ ++ VV VA G
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNN-GVIGLLEPMKKSMVPVQVQ-----LSMPVVKVASG 180
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
+ H + L D L+ G E QL
Sbjct: 181 NDHLVMLTADGELYTLGSGEQGQL 204
Score = 141 (54.7 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 46/178 (25%), Positives = 83/178 (46%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANME----PR-- 75
L + V +A G DH + LT +G +++ G+G +GQLG + + G +E P+
Sbjct: 170 LSMPVVKVASGNDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCV 229
Query: 76 EIRALSGLGVVQIS---AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+++ G V+ G + + A + +G +Y +G +N Q+G G V P ++
Sbjct: 230 MLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFV--PQNLT 287
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLS 190
F + V + G HT+ + + + G EY +L +G G + SV T +S
Sbjct: 288 ---SFKNSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLIS 342
Score = 136 (52.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 48/164 (29%), Positives = 79/164 (48%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL--GVVQISAGGWHSAARTQDG 102
T+ G+V + G G GQLG N+ R+ AL + +VQ AGG H+ ++ G
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGE-----NVMERKKPALVPIPEDIVQAEAGGMHTVCLSKSG 86
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y++G N+ G +G + ++ P + E KVV V+ G HT AL +D
Sbjct: 87 QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE-------KVVQVSAGDSHTAALTEDGR 139
Query: 163 --LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-NCPIVKL 203
LWG + + N + + + M + VP V+ + P+VK+
Sbjct: 140 VFLWG-SFRDNNGV-----IGLLEPMKKSMVPVQVQLSMPVVKV 177
Score = 111 (44.1 bits), Expect = 0.00093, P = 0.00093
Identities = 35/124 (28%), Positives = 54/124 (43%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G H + + EG +S G G+LG G + P I L V ++ G
Sbjct: 302 GQHHTVCMDSEGRAYSLGRAEYGRLGL-GEGAEEKSVPTLISRLPA--VSSVACGASVGY 358
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
A T+DG ++AWG Q+G + D P M+ + +N V+ V+ G +HT+
Sbjct: 359 AVTKDGRVFAWGMGTNYQLGTGQEED--AWSPVEMTGKQ---LENRMVLSVSSGGQHTVL 413
Query: 157 LCDD 160
L D
Sbjct: 414 LVKD 417
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 129 (50.5 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 43/132 (32%), Positives = 65/132 (49%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVV-QISAGGWHSAARTQDGFLYA 106
G V++ G + GQLG TD I + + Q+SAG SAA T +G LY
Sbjct: 3 GQVYATGGNNEGQLGL--GDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYT 60
Query: 107 WGWNNGGQVGVEGKLDLVVHD-PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG 165
+G G++G+ KL LV H P + + KV+ VACG HT+ L + +++
Sbjct: 61 FGEPESGKLGLPPKL-LVNHKVPQLVPGISE------KVIQVACGGGHTVVLTE-KAVYT 112
Query: 166 CGWNEYNQLSMG 177
G ++ QL +G
Sbjct: 113 FGLGQFGQLGLG 124
Score = 121 (47.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ ++ G + ALT EG ++++G G+LG P + P+ + +S V+Q++
Sbjct: 39 IKQLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEK-VIQVAC 97
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
GG H+ T+ +Y +G GQ+G+ G +P + +D K+ V CG
Sbjct: 98 GGGHTVVLTEKA-VYTFGLGQFGQLGL-GTFTFETSEPKVIESVKDK-----KISHVCCG 150
Query: 151 SRHT 154
HT
Sbjct: 151 ENHT 154
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 128 (50.1 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 36/105 (34%), Positives = 48/105 (45%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNG--SRGQLGYPSSGTD---ANME 73
+P ++ + VV IA G H +A T GIVF WG G S G+ P E
Sbjct: 30 VPQAIELHKEKVVC-IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE 88
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
P + L + + AG HSA+ T G +Y WG N GQ+ E
Sbjct: 89 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE 133
Score = 123 (48.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 45/135 (33%), Positives = 65/135 (48%)
Query: 44 LTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGF 103
LT+ G V S G+ S GQLG P G + P+ I L VV I+AG H+ A T G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPH-GPRRCVVPQAIE-LHKEKVVCIAAGLRHAVAATASGI 59
Query: 104 LYAWGWN--NGGQVGVEGK-LDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDD 160
++ WG + G+ G+ L L P S +N K + V GS H+ +L D
Sbjct: 60 VFQWGTGLASCGRRLCPGQTLPLFFTAKEP---SRVTGLENSKAMCVLAGSDHSASLTDA 116
Query: 161 NSLWGCGWNEYNQLS 175
++ G N++ QL+
Sbjct: 117 GEVYVWGSNKHGQLA 131
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 147 (56.8 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 44/144 (30%), Positives = 68/144 (47%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
+ G H + L++ G V+S+G G LG +S + M P ++ V+Q+SA
Sbjct: 69 IVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVDLQEK--VIQVSA 126
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
G H+AA T+DG ++ WG GV G L+ + P+ ++ VV VA G
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNN-GVIGLLEPMKKSMVPVQVQ-----LSVPVVKVASG 180
Query: 151 SRHTLALCDDNSLWGCGWNEYNQL 174
+ H + L D L+ G E QL
Sbjct: 181 NDHLVMLTVDGDLYTLGSGEQGQL 204
Score = 140 (54.3 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 45/175 (25%), Positives = 82/175 (46%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANME----PR-- 75
L + V +A G DH + LT +G +++ G+G +GQLG + + G +E P+
Sbjct: 170 LSVPVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCV 229
Query: 76 EIRALSGLGVVQIS---AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
+++ G V+ G + + A + +G +Y +G +N Q+G +G V P ++
Sbjct: 230 MLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFV--PQNLT 287
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
F + V + G HT+ + + + G EY +L +G G + SV T
Sbjct: 288 ---SFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPT 339
Score = 140 (54.3 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 50/176 (28%), Positives = 83/176 (47%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL--GVVQISAGGWHSAARTQDG 102
T+ G+V + G G GQLG N+ R+ AL + +VQ AGG H+ ++ G
Sbjct: 32 TEPGVVLTLGQGDVGQLGLGE-----NVMERKKPALVSIPEDIVQAEAGGMHTVCLSKSG 86
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y++G N+ G +G D V + D KV+ V+ G HT AL +D
Sbjct: 87 QVYSFGCNDEGALG----RDTSVEGSEMVPGKVDLQE---KVIQVSAGDSHTAALTEDGR 139
Query: 163 --LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-NCPIVKLFAEHWNSARLSV 215
LWG + + N + + + M + VP V+ + P+VK+ + + + L+V
Sbjct: 140 VFLWG-SFRDNNGV-----IGLLEPMKKSMVPVQVQLSVPVVKVASGNDHLVMLTV 189
>UNIPROTKB|J3KQ33 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AC007242
EMBL:AC007279 HGNC:HGNC:443 ChiTaRS:ALS2 PROSITE:PS50012
ProteinModelPortal:J3KQ33 Ensembl:ENST00000409632 Uniprot:J3KQ33
Length = 139
Score = 126 (49.4 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 36/114 (31%), Positives = 55/114 (48%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-ANMEPREIR 78
P R+ + V A G H + LT++G V+S+G L + S + P
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGT-----LPWRSGPVEICPSSPILEN 86
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
AL G V+ ++ G +HS A T +G Y WG N+ GQ V + V +P+P+S
Sbjct: 87 ALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQ--YVPEPNPVS 138
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 145 (56.1 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 49/168 (29%), Positives = 73/168 (43%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-----ANME 73
+P ++ + V IA G H LA T+ G+VF WG G + G A E
Sbjct: 125 IPQKIKSLKEKAV-GIAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKE 183
Query: 74 PREIRALSGLGVVQISAGGWHSAARTQ-DGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
P EI+ G+ + Q+S + ++ T +G LY WG N GQ+ V ++ LV P
Sbjct: 184 PCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNKHGQL-VSKEVFLV----EPKK 238
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGV 180
F S K+ V G H +A + ++ G +Y QL V
Sbjct: 239 IDTQFFSHE-KIGAVWSGWTHLVAQTETGKVFTWGRADYGQLGRHAAV 285
Score = 133 (51.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 46/148 (31%), Positives = 68/148 (45%)
Query: 42 LALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA--GGW-HSAAR 98
L+ EG ++ WG+ GQL S +EP++I +I A GW H A+
Sbjct: 207 LSTAGEGHLYVWGSNKHGQL---VSKEVFLVEPKKIDT-QFFSHEKIGAVWSGWTHLVAQ 262
Query: 99 TQDGFLYAWGWNNGGQVGVEGKL---DLVVH-DPH----PMSWSEDFDSQNIKVVDVACG 150
T+ G ++ WG + GQ+G + D V+ D P +E + I + +ACG
Sbjct: 263 TETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTILLFQIACG 322
Query: 151 SRHTLALCDDNSL-WGCGWNEYNQLSMG 177
S H LA+ D L WG WNE+ G
Sbjct: 323 SEHNLAVVGDCCLSWG--WNEHGMCGDG 348
Score = 128 (50.1 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 48/160 (30%), Positives = 76/160 (47%)
Query: 15 QVFHM-PSRMD--HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSS 66
+VF + P ++D F + + G+ H +A T+ G VF+WG GQLG Y +
Sbjct: 230 EVFLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLGRHAAVYVAD 289
Query: 67 GT---DANME--PREIRALSGLGVV---QISAGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
D+ + P+ +G + QI+ G H+ A D L +WGWN G G +
Sbjct: 290 RVIKLDSFLPCCPQPEAEKNGNHTILLFQIACGSEHNLAVVGDCCL-SWGWNEHGMCG-D 347
Query: 119 GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALC 158
G + VH P P+ + + Q + + CG+ H+LALC
Sbjct: 348 GT-EANVHVPKPVK-ALGYAKQIL----IGCGAGHSLALC 381
Score = 127 (49.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ACG+D + L + G+V S G+ + GQLG P + P++I++L V I+A
Sbjct: 84 VQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGPC-LIPQKIKSLKEKAV-GIAA 141
Query: 91 GGWHSAARTQDGFLYAWG 108
G H+ A T+ G ++ WG
Sbjct: 142 GLRHALAATESGLVFQWG 159
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 55/220 (25%), Positives = 100/220 (45%)
Query: 20 PSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME-PREIR 78
P ++ + L V I CG H +T++G VF+WG G+LG+ G ++ P+ +
Sbjct: 242 PRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH---GIQVDISRPKLVE 298
Query: 79 ALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVH-DPHPMSWSEDF 137
L+ + ++ G +H+ + G L++WG + VG+ G + H P +S
Sbjct: 299 FLALTNIDFVACGEYHTCVVSTSGDLFSWG-DGIHNVGLLGHGSDISHWIPKRVSGP--- 354
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKN 197
+ ++V+ VACG+ H+ + L+ G + L G ++ SV V + +
Sbjct: 355 -LEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHG---NRESVSYPKEV-QSLNG 409
Query: 198 CPIVKLFAEHWNSARLS--VPEHAKDSSIVKLFAGHWNSG 235
VK+ W++A + + + A S KLF W G
Sbjct: 410 LKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFT--WGDG 447
Score = 136 (52.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 44/164 (26%), Positives = 74/164 (45%)
Query: 15 QVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
+ + +P+ + +D IACG +ALT G VF+ G + GQLG +S +D +
Sbjct: 458 ETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG--NSISDGKLPC 515
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
L G V +I+ G H A T ++ WG G++G G + D +
Sbjct: 516 LVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLG-HGDTE----DKRTPTLV 570
Query: 135 EDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
E +++K ++CGS T ++C W G ++ + GC
Sbjct: 571 EALRDRHVK--SLSCGSNFTSSICIHK--WVSGADQ--SICSGC 608
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 142 (55.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 44/145 (30%), Positives = 68/145 (46%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
+V +A G H + L+ G V+++G G LG +S + P ++ G ++Q+S
Sbjct: 69 IVQAVAGGM-HTVCLSDTGNVYTFGCNDEGALGRDTSEEGSETVPAKVDL--GEKIIQVS 125
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG HSAA T+DG +Y WG GV G L+ + P+ D +K+V
Sbjct: 126 AGDSHSAALTEDGGVYVWGSFRDNN-GVIGLLEPMKKCTVPVK--VPIDKPVVKIVS--- 179
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQL 174
G+ H + L L+ G E QL
Sbjct: 180 GNDHLVMLTAHGELYTSGCGEQGQL 204
Score = 129 (50.5 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 45/172 (26%), Positives = 76/172 (44%)
Query: 27 LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLG-----YPSSGTDANM----EPRE- 76
+D V I G DH + LT G +++ G G +GQLG + + G + EP+
Sbjct: 170 IDKPVVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMV 229
Query: 77 -IRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSE 135
I+ + + G + + A +++G +Y +G +N Q+G + V P+ S
Sbjct: 230 IIKPRGKVVFTDVFCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFV----PVKLSS 285
Query: 136 DFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMT 187
F + V + G HTL L + + G EY +L +G V + S T
Sbjct: 286 -FKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPT 336
Score = 128 (50.1 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 47/161 (29%), Positives = 77/161 (47%)
Query: 46 QEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL--GVVQISAGGWHSAARTQDGF 103
++G+V G G GQLG G D ME R+ AL L G+VQ AGG H+ + G
Sbjct: 33 EKGLVLVLGQGDVGQLGL---GEDV-ME-RKKPALVTLPEGIVQAVAGGMHTVCLSDTGN 87
Query: 104 LYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL 163
+Y +G N+ G +G + + P + E K++ V+ G H+ AL +D +
Sbjct: 88 VYTFGCNDEGALGRDTSEEGSETVPAKVDLGE-------KIIQVSAGDSHSAALTEDGGV 140
Query: 164 WGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVK-NCPIVKL 203
+ W + + G+ + M + +VP V + P+VK+
Sbjct: 141 YV--WGSFRDNNGVIGL--LEPMKKCTVPVKVPIDKPVVKI 177
Score = 114 (45.2 bits), Expect = 0.00042, P = 0.00042
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA-GGWHS 95
G H L L EG +S G G+LG G D E E + G+ VQ+ A G S
Sbjct: 299 GQHHTLCLNSEGKAYSLGRAEYGRLGL---GKDVG-EKSEPTVVPGISDVQVVACGASVS 354
Query: 96 AARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTL 155
A T+ G +++WG Q+G + D P M+ + +N V+ V+ G +HT+
Sbjct: 355 YAVTKQGSVFSWGMGTNLQLGTGEEED--EWSPVEMTGKQ---LENRVVLSVSSGGQHTV 409
Query: 156 ALCDD 160
L D
Sbjct: 410 LLVKD 414
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 134 (52.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 41/134 (30%), Positives = 67/134 (50%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V ++ACG+D + L + G+V S G+ + GQLG P + P++I+ V I+A
Sbjct: 104 VQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGPC-LIPQKIKQSLKEKAVGIAA 162
Query: 91 GGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPH--PMSWS-----EDFDSQNIK 143
G H+ A T+ G ++ WG G+ + V H P+ W+ E +++K
Sbjct: 163 GLRHALAATESGLVFQWG------TGMASRAKRV-HQGKTLPVFWAAKEPCEIKGLEDVK 215
Query: 144 VVDVACGSRHTLAL 157
V VA GS H ++L
Sbjct: 216 VKRVAAGSYHCVSL 229
Score = 111 (44.1 bits), Expect = 0.00028, P = 0.00028
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 19 MPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD-----ANME 73
+P ++ L IA G H LA T+ G+VF WG G + G A E
Sbjct: 145 IPQKIKQSLKEKAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKE 204
Query: 74 PREIRALSGLGVVQISAGGWHSAART 99
P EI+ L + V +++AG +H + T
Sbjct: 205 PCEIKGLEDVKVKRVAAGSYHCVSLT 230
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 144 (55.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 48/169 (28%), Positives = 75/169 (44%)
Query: 9 PLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGT 68
P LS + +PSR+ + +A H + LT + +F +G+ S GQLG+ G
Sbjct: 453 PTITLSSIPDLPSRIS------IKQVALSKTHTMVLTNDNELFGFGDNSCGQLGF---GK 503
Query: 69 DANMEP-REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD 127
+ ME R + +L G + + G + S G L +G +G + K D
Sbjct: 504 FSKMENGRLVESLKGRDIQSVGVGNYFSVICCDRGTLLTFGTAKNLGLGKDAK-D----S 558
Query: 128 PHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSM 176
PM E +NIK D+ CG H +A+ + G G N+Y QL +
Sbjct: 559 AKPMLL-EQLLRENIK--DIYCGHDHVVAVLESGECLGWGSNQYGQLGL 604
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 135 (52.6 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 42/125 (33%), Positives = 61/125 (48%)
Query: 45 TQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL--GVVQISAGGWHSAARTQDG 102
T+ G+V + G G GQLG N+ R+ AL + VVQ AGG H+ ++ G
Sbjct: 40 TEPGLVLTLGQGDVGQLGLGE-----NVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSG 94
Query: 103 FLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNS 162
+Y++G N+ G +G + ++ P + E KVV V+ G HT AL DD
Sbjct: 95 QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE-------KVVQVSAGDSHTAALTDDGR 147
Query: 163 --LWG 165
LWG
Sbjct: 148 VFLWG 152
Score = 118 (46.6 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 28/78 (35%), Positives = 41/78 (52%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V G H + L++ G V+S+G G LG +S + M P ++ VVQ+SA
Sbjct: 77 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSA 134
Query: 91 GGWHSAARTQDGFLYAWG 108
G H+AA T DG ++ WG
Sbjct: 135 GDSHTAALTDDGRVFLWG 152
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 142 (55.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 45/178 (25%), Positives = 78/178 (43%)
Query: 18 HMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI 77
H PSRM+ + V G + +TQ G + S G+ + LG + P+ I
Sbjct: 494 HYPSRMESVRNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHS--PKLI 551
Query: 78 RALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDF 137
L+ + V Q++AG H A +++G +Y WG + G +G+ G P + S
Sbjct: 552 ARLADVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALGL-GNYQQQQKFPQKILLSH-- 608
Query: 138 DSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
K + CG + L + L CG N+YN+L ++++ ++ +P V
Sbjct: 609 --VKTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLGFQRS-AKITAFKKVQLPHKV 663
Score = 135 (52.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 43/170 (25%), Positives = 77/170 (45%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQIS 89
V+ D+A H + + ++G ++WG G+ GQLG + + P + ++ VV
Sbjct: 453 VIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHY-PSRMESVRNYHVVSAC 511
Query: 90 AGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVAC 149
AG + TQ G L + G N +G + + + H P ++ D ++V VA
Sbjct: 512 AGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNY--HSPKLIARLAD-----VRVEQVAA 564
Query: 150 GSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP 199
G +H LAL + +++ G + L +G Q ++ + HVK P
Sbjct: 565 GLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILL-SHVKTKP 613
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 46/168 (27%), Positives = 70/168 (41%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAART 99
H + + + +G GQLG S +P I AL L +VQ + G H+ T
Sbjct: 127 HTILINMDRKALGFGRNPSGQLGL-SQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLT 185
Query: 100 QDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCD 159
G +YA G N GQ GV G ++ P P+++ + ++ + CG+ ++ L
Sbjct: 186 DTGTVYACGENKSGQCGV-GNTHANIYSPTPINY------RGPPIIRIGCGAEFSVILDI 238
Query: 160 DNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPI-VKLFAE 206
SL G EY QL +LS H + P V L+ E
Sbjct: 239 KGSLHTFGLPEYGQLGHNTDAKYFVNANKLSF--HFETSPKKVVLYIE 284
Score = 124 (48.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 55/212 (25%), Positives = 92/212 (43%)
Query: 4 HLASGPLKMLSQVFHMPSRMDHF--LDLV-VTDIACGFDHCLALTQEGIVFSWGNGSRGQ 60
H + P K++ ++ S+ H +D V + D ACG +H +A+ + V+SWG G G+
Sbjct: 271 HFETSPKKVV--LYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGR 328
Query: 61 LGYPSSGTDANMEPREIRALS--GLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVE 118
LG+ + M PR ++ G G + G S + G L+ +G N
Sbjct: 329 LGHAEPKDE--MVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQNKK-----T 381
Query: 119 GKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL-WGCGWNEYNQLSMG 177
G+ ++ P P+ +D NI D+ C + + DD + WG + +L G
Sbjct: 382 GEANMY---PKPV---QDLSGWNI--TDIGCANTSIMISADDTLIAWGAS-PTFGEL--G 430
Query: 178 CGVSQVSVMTRLSVP--EHVKNCPIVKLFAEH 207
G Q S VP +++K P V + H
Sbjct: 431 IGEFQKSSTVPKEVPKLDNIK-IPQVTMGYSH 461
>DICTYBASE|DDB_G0289237 [details] [associations]
symbol:tirA "Toll-Interleukin (TIR) receptor
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0006952 "defense
response" evidence=IMP] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000157 InterPro:IPR002110 Pfam:PF13676
PROSITE:PS50088 PROSITE:PS50104 SMART:SM00248 InterPro:IPR001357
dictyBase:DDB_G0289237 Pfam:PF00533 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007165 GO:GO:0006952 GO:GO:0008283 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GenomeReviews:CM000154_GR GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AAFI02000131
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 SUPFAM:SSF52200 RefSeq:XP_636358.1
ProteinModelPortal:Q54HT1 EnsemblProtists:DDB0232375 GeneID:8627031
KEGG:ddi:DDB_G0289237 eggNOG:NOG261364 InParanoid:Q54HT1
OMA:WRAEITR Uniprot:Q54HT1
Length = 1336
Score = 139 (54.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/104 (38%), Positives = 55/104 (52%)
Query: 25 HFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIR------ 78
+FL V+ ++CG D + LT EG VFSWG +GQLG +S + N E + +
Sbjct: 442 NFLKKVLM-VSCGKDFNVLLTNEGQVFSWGKNDQGQLGLGNSDSKENYEIKLVNFDDPYD 500
Query: 79 ALSGLGVVQISAGGWHSAA----RTQDGF--LYAWGWNNGGQVG 116
+ S + IS GG HS A + DG LY WG N+ GQ+G
Sbjct: 501 SNSNKFISFISCGGNHSIAIESNSSTDGNCRLYGWGSNSQGQIG 544
Score = 118 (46.6 bits), Expect = 0.00066, P = 0.00066
Identities = 38/161 (23%), Positives = 80/161 (49%)
Query: 40 HCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREI-RALSGLG------VVQISAGG 92
H + L + G + + NG+ +G G + M +I R++S + V+ +S G
Sbjct: 398 HTVGLNKFGQL-GYKNGNTNCIG--GGGNNKLMIENQIQRSISIINQNFLKKVLMVSCGK 454
Query: 93 WHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD-VACGS 151
+ T +G +++WG N+ GQ+G+ ++ +++ + +DS + K + ++CG
Sbjct: 455 DFNVLLTNEGQVFSWGKNDQGQLGLGNSDSKENYEIKLVNFDDPYDSNSNKFISFISCGG 514
Query: 152 RHTLALCDDNSLWG-C---GWNEYNQLSMGCGVSQVSVMTR 188
H++A+ ++S G C GW +Q +G S V ++ +
Sbjct: 515 NHSIAIESNSSTDGNCRLYGWGSNSQGQIGEKYSSVPILIK 555
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 131 (51.2 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 41/121 (33%), Positives = 59/121 (48%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALS--GLGVVQISAGGWHSAARTQDGFLYAW 107
V S G G LG+P G +PR++ GL +Q AGG HSA T +G +Y
Sbjct: 154 VLSCGEGEA--LGHP--GRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMC 209
Query: 108 GWNNGGQVGVEG-KLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSL--W 164
G N G V EG + + + + + ED + + K+V +A G+ T AL D S+ W
Sbjct: 210 GINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEG-KIVMLAAGASFTAALTDQGSVIAW 268
Query: 165 G 165
G
Sbjct: 269 G 269
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 34/106 (32%), Positives = 57/106 (53%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
+L ++CGF H + L + G V+++G G GQLG+ ++ P ++AL G Q
Sbjct: 924 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH--GDVNSRGSPTLVQALPGPST-Q 980
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHD--PHPM 131
++AG H+A DG ++ +G + GQ+G LD+ + P PM
Sbjct: 981 VTAGSNHTAVLLMDGQVFTFGSFSKGQLG-RPILDMPYWNAKPSPM 1025
>ASPGD|ASPL0000040680 [details] [associations]
symbol:AN2874 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:BN001306 EMBL:AACD01000051
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_660478.1 ProteinModelPortal:Q5B9A6
EnsemblFungi:CADANIAT00010215 GeneID:2873908 KEGG:ani:AN2874.2
Uniprot:Q5B9A6
Length = 1365
Score = 107 (42.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 FHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPRE 76
+ P++ D+V +A G +HC+ALT + +++WG+ S GQLG ++ A M P E
Sbjct: 927 YKQPTKNTQLPDVV--QVAAGGEHCIALTHDNKIYTWGDNSHGQLGRLTNSMTAQM-PGE 983
Query: 77 I 77
+
Sbjct: 984 V 984
Score = 71 (30.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK 143
G+ +SAG H+ A T G WG N+ ++ + HP++ + + ++
Sbjct: 1295 GIKMVSAGWTHTIAVTNGGKALGWGSNDHYEIHPD-------ETKHPINDPMEIPMEGLR 1347
Query: 144 VVDVACGSRHTLAL 157
VV+ A G T+ L
Sbjct: 1348 VVEAAAGRFFTILL 1361
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 105 (42.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 86 VQISAGGWH-SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+I G H S + G +Y G+N G++G G+ +L P+ + + K+
Sbjct: 754 VKIIDGSDHFSVFLLESGKVYTAGYNKNGELG-NGEFNLKKKFGVPILLNICVN----KI 808
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP-IVKL 203
+ +ACG + L + D ++G G N+ +QL +G V+ P HVKN ++ +
Sbjct: 809 IKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIG-------VIKDFYEPVHVKNLTNVINI 861
Query: 204 FAEHWNSA 211
FA + +SA
Sbjct: 862 FAGYDHSA 869
Score = 101 (40.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
L +G L + F +P ++ ++ ++ IACG+++ L ++ G+V+ WG + QLG
Sbjct: 784 LGNGEFN-LKKKFGVPILLNICVNKIIK-IACGYNYVLCVSDVGLVYGWGKNDKSQLGI- 840
Query: 65 SSGTDANM-EPREIRALSGLGVVQISAGGWHSA 96
G + EP ++ L+ V+ I AG HSA
Sbjct: 841 --GVIKDFYEPVHVKNLTN--VINIFAGYDHSA 869
Score = 79 (32.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
I+CG H LA+ G+++SWG + G +G +GT+ N+ EP I
Sbjct: 354 ISCGDMHTLAICTGGVLYSWGYNNFGCIG---NGTNQNVYEPTPI 395
Score = 71 (30.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 36/127 (28%), Positives = 55/127 (43%)
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
G ++ + + G LY WG G+VG+ G V + + + N K+ + G+
Sbjct: 895 GVNNYSSDECGDLYIWGNAESGKVGL-G----VDYTQGCILLPRKINIIN-KIYKCSLGN 948
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV---KNCPIVKLFAEHW 208
H+L L + N L+ CG N +L G V +SVP V N I + A +
Sbjct: 949 SHSLFLTNTNELYVCGSNNNGRL--GLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNT 1006
Query: 209 NSARLSV 215
S LSV
Sbjct: 1007 YSIILSV 1013
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 105 (42.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 86 VQISAGGWH-SAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
V+I G H S + G +Y G+N G++G G+ +L P+ + + K+
Sbjct: 754 VKIIDGSDHFSVFLLESGKVYTAGYNKNGELG-NGEFNLKKKFGVPILLNICVN----KI 808
Query: 145 VDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCP-IVKL 203
+ +ACG + L + D ++G G N+ +QL +G V+ P HVKN ++ +
Sbjct: 809 IKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIG-------VIKDFYEPVHVKNLTNVINI 861
Query: 204 FAEHWNSA 211
FA + +SA
Sbjct: 862 FAGYDHSA 869
Score = 101 (40.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 5 LASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYP 64
L +G L + F +P ++ ++ ++ IACG+++ L ++ G+V+ WG + QLG
Sbjct: 784 LGNGEFN-LKKKFGVPILLNICVNKIIK-IACGYNYVLCVSDVGLVYGWGKNDKSQLGI- 840
Query: 65 SSGTDANM-EPREIRALSGLGVVQISAGGWHSA 96
G + EP ++ L+ V+ I AG HSA
Sbjct: 841 --GVIKDFYEPVHVKNLTN--VINIFAGYDHSA 869
Score = 79 (32.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 34 IACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANM-EPREI 77
I+CG H LA+ G+++SWG + G +G +GT+ N+ EP I
Sbjct: 354 ISCGDMHTLAICTGGVLYSWGYNNFGCIG---NGTNQNVYEPTPI 395
Score = 71 (30.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 36/127 (28%), Positives = 55/127 (43%)
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
G ++ + + G LY WG G+VG+ G V + + + N K+ + G+
Sbjct: 895 GVNNYSSDECGDLYIWGNAESGKVGL-G----VDYTQGCILLPRKINIIN-KIYKCSLGN 948
Query: 152 RHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV---KNCPIVKLFAEHW 208
H+L L + N L+ CG N +L G V +SVP V N I + A +
Sbjct: 949 SHSLFLTNTNELYVCGSNNNGRL--GLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNT 1006
Query: 209 NSARLSV 215
S LSV
Sbjct: 1007 YSIILSV 1013
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/103 (33%), Positives = 54/103 (52%)
Query: 18 HMPSRMDHFLD---LVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
H P +D F V + C F H + L+Q+G V++ G+G G+LG+ T + P
Sbjct: 164 HHPELLDLFSRSRVYVKQVVLCKF-HSVFLSQQGQVYTCGHGRGGRLGHGDEQTC--LVP 220
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
R + LSG Q++A H+ T+DG +Y +G N Q+G+
Sbjct: 221 RLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQLGI 263
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 46/167 (27%), Positives = 80/167 (47%)
Query: 18 HMPSRMDHFL--DLVVTDIA-CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
H P +D F + + + C F H + L+Q+G V++ G+G G+LG+ T + P
Sbjct: 164 HHPELVDLFSRSGIYIKQVVLCKF-HSVFLSQKGQVYTCGHGPGGRLGHGDEQTC--LVP 220
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R + L+G Q++A H+ T+DG +Y +G N Q+G+ + P +
Sbjct: 221 RLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGI-------IPPPSSCNVP 273
Query: 135 EDFDSQNIK---VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
++ +K ++ VA G HT+ L +++ G N QL GC
Sbjct: 274 RQIQAKYLKGRTIIGVAAGRFHTV-LWTREAVYTMGLNG-GQL--GC 316
Score = 116 (45.9 bits), Expect = 0.00093, P = 0.00093
Identities = 38/161 (23%), Positives = 78/161 (48%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V++WG+ + LG+ S + + E ++ + SG+ + Q+ +HS +Q G +Y G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GG++G + +V P + E + N VA HT+ L +D ++ G N
Sbjct: 204 GPGGRLGHGDEQTCLV--PRLV---EGLNGHNCS--QVAAAKDHTVVLTEDGCVYTFGLN 256
Query: 170 EYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNS 210
++QL + S +V ++ +++K I+ + A +++
Sbjct: 257 IFHQLGIIPPPSSCNVPRQIQA-KYLKGRTIIGVAAGRFHT 296
>UNIPROTKB|G4NC24 [details] [associations]
symbol:MGG_00456 "BTB domain and ankyrin repeat protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 INTERPRO:IPR000408 EMBL:CM001235 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 RefSeq:XP_003718611.1
ProteinModelPortal:G4NC24 EnsemblFungi:MGG_00456T0 GeneID:2674172
KEGG:mgr:MGG_00456 Uniprot:G4NC24
Length = 1598
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 31/92 (33%), Positives = 52/92 (56%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY---PSSGTDA---NMEPREI-RAL 80
D VT + G DH +A+T +G +++WG+ + QLGY P + D ++ P+++ AL
Sbjct: 375 DRKVTQVVLGQDHTMAVTDKGELWTWGSNAYSQLGYALPPPAKKDEEPMSLAPKQVFGAL 434
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNG 112
V+ +SA HS A T + ++ WG N+G
Sbjct: 435 KKEVVIGVSASAIHSVAHTTNS-VFCWGKNSG 465
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 45/153 (29%), Positives = 70/153 (45%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGY--P-SSGTD---ANMEPREI-RALSGL 83
V +A G DH LA+T+ G +FSWG+ GQLGY P ++ D + PR+I
Sbjct: 481 VASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDDVPVQLSPRQIFNPFKKE 540
Query: 84 GVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG-VEGKLDLVVHDPHPMSWSEDFDSQNI 142
++ +A HS + G LY +G N GQ+G V+ + P S I
Sbjct: 541 VILGAAASAVHSVVYSTSG-LYTFG-KNEGQLGLVDSDARSLEVQTTPRRVGASLFSTPI 598
Query: 143 KVVDVACGSRHTLALCDDNSLWGCGWNEYNQLS 175
+ V+ + T L ++ +W Y++LS
Sbjct: 599 Q--SVSATDQATAILLQNHEVWVFAHYGYSRLS 629
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 46/167 (27%), Positives = 80/167 (47%)
Query: 18 HMPSRMDHFL--DLVVTDIA-CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
H P +D F + + + C F H + L+Q+G V++ G+G G+LG+ T + P
Sbjct: 164 HHPELVDLFSRSGIYIKQVVLCKF-HSVFLSQKGQVYTCGHGPGGRLGHGDEQTC--LVP 220
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R + L+G Q++A H+ T+DG +Y +G N Q+G+ + P +
Sbjct: 221 RLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGI-------IPPPSSCNVP 273
Query: 135 EDFDSQNIK---VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
++ +K ++ VA G HT+ L +++ G N QL GC
Sbjct: 274 RQIQAKYLKGRTIIGVAAGRFHTV-LWTREAVYTMGLNG-GQL--GC 316
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 44/158 (27%), Positives = 75/158 (47%)
Query: 18 HMPSRMDHFL--DLVVTDIA-CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
H P +D F + V + C F H + L+Q+G V++ G+G G+LG+ T + P
Sbjct: 164 HHPELLDLFSRSGVYVKQVVLCKF-HSVFLSQKGQVYTCGHGRGGRLGHGDEQTC--LVP 220
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R + LSG Q++A H+ T DG +Y +G N Q+G+ + P +
Sbjct: 221 RLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQLGI-------IPPPASCNVP 273
Query: 135 EDFDSQNIK---VVDVACGSRHTLALCDDNSLWGCGWN 169
++ +K ++ VA G HT+ L +++ G N
Sbjct: 274 RQIQAKYLKGRTIIGVAAGRFHTV-LWTREAVYTLGLN 310
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
V++WG+ + LG+ S + + E ++ + SG+ V Q+ +HS +Q G +Y G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWN 169
GG++G + +V P + E N VA HT+ L DD ++ G N
Sbjct: 204 GRGGRLGHGDEQTCLV--PRLV---EGLSGHNCS--QVAAAKDHTVVLTDDGCVYTFGLN 256
Query: 170 EYNQLSM 176
++QL +
Sbjct: 257 MFHQLGI 263
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 46/167 (27%), Positives = 80/167 (47%)
Query: 18 HMPSRMDHFL--DLVVTDIA-CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
H P +D F + + + C F H + L+Q+G V++ G+G G+LG+ T + P
Sbjct: 164 HHPELVDLFSRSGIYIKQVVLCKF-HSVFLSQKGQVYTCGHGPGGRLGHGDEQTC--LVP 220
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R + L+G Q++A H+ T+DG +Y +G N Q+G+ + P +
Sbjct: 221 RLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGI-------IPPPSSCNVP 273
Query: 135 EDFDSQNIK---VVDVACGSRHTLALCDDNSLWGCGWNEYNQLSMGC 178
++ +K ++ VA G HT+ L +++ G N QL GC
Sbjct: 274 RQIQAKYLKGRTIIGVAAGRFHTV-LWTREAVYTMGLNG-GQL--GC 316
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 11 KMLSQVFHMPSRMDHF-LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
K S+V P F ++ ++CGF H + L + G V+++G G GQLG+ G D
Sbjct: 897 KDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH---G-D 952
Query: 70 ANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
N P ++AL G Q++AG H+A DG ++ +G + GQ+G
Sbjct: 953 VNSRGCPTLVQALPGPST-QVTAGSNHTAVLVMDGQVFTFGSFSKGQLG 1000
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 43/158 (27%), Positives = 76/158 (48%)
Query: 18 HMPSRMDHFL--DLVVTDIA-CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
H P +D F + + + C F H + L+Q+G V++ G+G G+LG+ T + P
Sbjct: 164 HHPELVDLFSRSGVYIKQVVLCKF-HSVFLSQKGQVYTCGHGPGGRLGHGDEQTC--LVP 220
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R + LSG Q++A H+ T+DG +Y +G N Q+G+ + P +
Sbjct: 221 RLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGI-------IPPPSNCNVP 273
Query: 135 EDFDSQNIK---VVDVACGSRHTLALCDDNSLWGCGWN 169
++ +K ++ VA G HT+ L +++ G N
Sbjct: 274 RQMQAKYLKGRTIIGVAAGRFHTV-LWTREAVYTLGLN 310
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 43/158 (27%), Positives = 76/158 (48%)
Query: 18 HMPSRMDHFL--DLVVTDIA-CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
H P +D F + + + C F H + L+Q+G V++ G+G G+LG+ T + P
Sbjct: 164 HHPELVDLFSRSGIYIKQVVLCKF-HSVFLSQKGQVYTCGHGPGGRLGHGDEQTC--LVP 220
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R + LSG Q++A H+ T+DG +Y +G N Q+G+ + P +
Sbjct: 221 RLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGL-------IPPPSSCNVP 273
Query: 135 EDFDSQNIK---VVDVACGSRHTLALCDDNSLWGCGWN 169
++ +K ++ VA G HT+ L +++ G N
Sbjct: 274 RQMQAKYLKGRTIIGVAAGRFHTV-LWTREAVYTMGLN 310
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 44/158 (27%), Positives = 75/158 (47%)
Query: 18 HMPSRMDHFL--DLVVTDIA-CGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEP 74
H P +D F + + + C F H + L+ +G +++ G+G G+LG+ T + P
Sbjct: 167 HHPELVDLFPRNSVYIKQVVLCKF-HSVFLSHKGQIYTCGHGQGGRLGHGDEQTC--LVP 223
Query: 75 REIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWS 134
R + LS QI+A H+ T+DG +Y +G N Q+G+ + P S
Sbjct: 224 RLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQLGI-------LPPPANCSVP 276
Query: 135 EDFDSQNIK---VVDVACGSRHTLALCDDNSLWGCGWN 169
++N+K V+ VA G HT+ L +++ G N
Sbjct: 277 RQVQAKNLKGRMVIGVAAGRFHTV-LWTKEAVYTMGLN 313
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 133 (51.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGV 85
+L ++CGF H + L + G V+++G G GQLG+ G D N P ++AL G
Sbjct: 814 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH---G-DVNSRGCPTLVQALPGPST 869
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
Q++AG H+A DG ++ +G + GQ+G
Sbjct: 870 -QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 899
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 133 (51.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGV 85
+L ++CGF H + L + G V+++G G GQLG+ G D N P ++AL G
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH---G-DVNSRGCPTLVQALPGPST 956
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
Q++AG H+A DG ++ +G + GQ+G
Sbjct: 957 -QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 133 (51.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGV 85
+L ++CGF H + L + G V+++G G GQLG+ G D N P ++AL G
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH---G-DVNSRGCPTLVQALPGPST 956
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
Q++AG H+A DG ++ +G + GQ+G
Sbjct: 957 -QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 133 (51.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGV 85
+L ++CGF H + L + G V+++G G GQLG+ G D N P ++AL G
Sbjct: 939 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH---G-DVNSRGCPTLVQALPGPST 994
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
Q++AG H+A DG ++ +G + GQ+G
Sbjct: 995 -QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 133 (51.9 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGV 85
+L ++CGF H + L + G V+++G G GQLG+ G D N P ++AL G
Sbjct: 939 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH---G-DVNSRGCPTLVQALPGPST 994
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
Q++AG H+A DG ++ +G + GQ+G
Sbjct: 995 -QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
>CGD|CAL0000172 [details] [associations]
symbol:orf19.7574 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 46/159 (28%), Positives = 73/159 (45%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
+H + +TQ+G +FS G GSRG+LG+ + + + + I + + ++ HS A
Sbjct: 239 NHSVVVTQDGELFSCGVGSRGRLGHGLTDLNNYFKFKRIEFFNDKTIKDVAISSNHSIAL 298
Query: 99 TQDGFLYAWGWNNGGQVGVEGK--------LDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
T D +YAWG N+ Q+GV LD + P M E QNI ++V+
Sbjct: 299 TTDNEVYAWGLNSFNQLGVPNMNNKKSTNYLDKFIATPI-MVGGELRKMQNIIGIEVS-- 355
Query: 151 SRHTLALCDDN-SLWGCGWNEYNQLSMGCGVSQVSVMTR 188
H+LA + WG + +S G +V V R
Sbjct: 356 KIHSLAWSKNYLCFWGLNVGQMG-ISYTNGDIEVKVQER 393
>UNIPROTKB|Q5ACR8 [details] [associations]
symbol:CaO19.7574 "Potential ankyrin repeat protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 46/159 (28%), Positives = 73/159 (45%)
Query: 39 DHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAAR 98
+H + +TQ+G +FS G GSRG+LG+ + + + + I + + ++ HS A
Sbjct: 239 NHSVVVTQDGELFSCGVGSRGRLGHGLTDLNNYFKFKRIEFFNDKTIKDVAISSNHSIAL 298
Query: 99 TQDGFLYAWGWNNGGQVGVEGK--------LDLVVHDPHPMSWSEDFDSQNIKVVDVACG 150
T D +YAWG N+ Q+GV LD + P M E QNI ++V+
Sbjct: 299 TTDNEVYAWGLNSFNQLGVPNMNNKKSTNYLDKFIATPI-MVGGELRKMQNIIGIEVS-- 355
Query: 151 SRHTLALCDDN-SLWGCGWNEYNQLSMGCGVSQVSVMTR 188
H+LA + WG + +S G +V V R
Sbjct: 356 KIHSLAWSKNYLCFWGLNVGQMG-ISYTNGDIEVKVQER 393
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 132 (51.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 11 KMLSQVFHMPSRMDHF-LDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTD 69
K S+V P F ++ ++CGF H + L + G V+++G G GQLG+ G D
Sbjct: 883 KDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH---G-D 938
Query: 70 ANME--PREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
N P ++AL G Q++AG H+A DG ++ +G + GQ+G
Sbjct: 939 VNSRGCPTLVQALPGPST-QVTAGSNHTAVLVMDGQVFTFGSFSKGQLG 986
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 131 (51.2 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGV 85
+L ++CGF H + L + G V+++G G GQLG+ G D N P ++AL G
Sbjct: 839 ELRAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGH---G-DVNSRGCPTLVQALPGPST 894
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
Q++AG H+A DG ++ +G + GQ+G
Sbjct: 895 -QVTAGSNHTAILLMDGQVFTFGSFSKGQLG 924
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 124 (48.7 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 43/172 (25%), Positives = 77/172 (44%)
Query: 30 VVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGVVQ 87
+ T IA G D+ + L G V+S+G+ +LGY + P++I ++ L +
Sbjct: 304 IATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSI--LQMKS 361
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNI---KV 144
I+ WHS G +Y G + G++G P +S + + + +V
Sbjct: 362 IACASWHSVFLDLKGRVYTCGSSTNGRLG-RAISSYSSFYPERVSITNSKTNGTLPQEEV 420
Query: 145 V-DVACGSRHTLALCDDNSLWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHV 195
+ +ACG+ T L + SL+ G N +QL + ++ V + S P+ V
Sbjct: 421 IKQIACGTNFTTVLSESGSLYSWGVNTKSQLGL---INLVGISEYYSQPKLV 469
Score = 119 (46.9 bits), Expect = 0.00032, P = 0.00032
Identities = 49/190 (25%), Positives = 90/190 (47%)
Query: 1 MCDHLASGPLKMLSQVFHMPSRMDHFLDLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQ 60
+C + +G K + +P+++ + + IACG H LA+ G V+SWGNG+ G+
Sbjct: 220 LCSYGKTGHKKKRDVL--IPTQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGNGASGR 277
Query: 61 LGYPSSGTDANMEPRE--IRALSGLG----VVQISAGGWHSAARTQDGFLYAWGWNNGGQ 114
LG G D ++ P I ++ G I+AG +S +G +Y++G N +
Sbjct: 278 LGL---GNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLHYK 334
Query: 115 VGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGCGWNEYNQL 174
+G + + D + S + S +++ +AC S H++ L ++ CG + +L
Sbjct: 335 LGYK-ECDGALGF---QSTPKKIPSI-LQMKSIACASWHSVFLDLKGRVYTCGSSTNGRL 389
Query: 175 SMGCGVSQVS 184
G +S S
Sbjct: 390 --GRAISSYS 397
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 39/138 (28%), Positives = 64/138 (46%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G ++ L LT G V+S G S G+ G+ D + P +I LS + I+ G HS
Sbjct: 202 GQNYNLILTDTGAVYSSGLCSYGKTGHKKK-RDV-LIPTQILELSNKRIKSIACGTHHSL 259
Query: 97 ARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLA 156
A G +Y+WG G++G+ +V P +S F S I +A G +++
Sbjct: 260 AMDDLGQVYSWGNGASGRLGLGNDFS-IVPTPTLISVINRFGSNEIATA-IAAGCDNSMI 317
Query: 157 LCDDNSLWGCGWNEYNQL 174
L + ++ G N + +L
Sbjct: 318 LGSNGDVYSFGSNLHYKL 335
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 125 (49.1 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 37 GFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSA 96
G++H LALT+ G ++ WG+ QL + T + +P +I+ + V IS GG SA
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSID-KPIKIQVIPNQRVKSISCGGNFSA 100
Query: 97 ARTQDGFLYAWG 108
A ++G LY WG
Sbjct: 101 AIMENGLLYVWG 112
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 37/148 (25%), Positives = 64/148 (43%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISA 90
V I+CG + A+ + G+++ WG G T++ P ++ L G+ V I
Sbjct: 89 VKSISCGGNFSAAIMENGLLYVWGTLIEG-----GKCTES---PTKVDLLKGVTCVSIGI 140
Query: 91 GGW----HSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVD 146
S + +Y WG N GQ+GV G D + + P ++ K +
Sbjct: 141 NHCAVVADSPTTPEKRSVYTWGTNRKGQLGVVG--DSITNAPRRVTLGS-------KAIS 191
Query: 147 VACGSRHTLALCDDNSLWGCGWNEYNQL 174
V CG T A+ + N ++ G+N+ Q+
Sbjct: 192 VCCGEEFTAAIVEGNEVFVWGYNKSRQI 219
>FB|FBgn0037116 [details] [associations]
symbol:CG7158 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0031982 "vesicle" evidence=ISS] [GO:0035011 "melanotic
encapsulation of foreign target" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 EMBL:AE014296 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0035011 EMBL:AY061403
RefSeq:NP_649347.1 UniGene:Dm.3610 SMR:Q9VNZ8 IntAct:Q9VNZ8
MINT:MINT-1031217 EnsemblMetazoa:FBtr0078462 GeneID:40410
KEGG:dme:Dmel_CG7158 UCSC:CG7158-RA FlyBase:FBgn0037116
InParanoid:Q9VNZ8 OMA:HWFILFN OrthoDB:EOG4S7H4T GenomeRNAi:40410
NextBio:818636 Uniprot:Q9VNZ8
Length = 1486
Score = 131 (51.2 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 37/111 (33%), Positives = 57/111 (51%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGW 109
+F++G + G LG AN+ ++ L +GV I+AG H+ ART DG LY WG
Sbjct: 259 LFTFGASNNGLLGSGDHIRRANV--MRLQKLDSMGVCSIAAGLEHTVARTLDGRLYHWGL 316
Query: 110 NNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIK---VVDVACGSRHTLAL 157
NN Q+G + V P ++ +E+ + I+ ++ CG HTL L
Sbjct: 317 NNHSQLGED------VSSPMEITITENTAALPIEQNSALEATCGDYHTLLL 361
Score = 37 (18.1 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 163 LWGCGWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEHWNSARL---SVPE-H 218
L G + EY S+ CG Q ++ + V P L+ ++ R V E H
Sbjct: 752 LHGNCYLEYPDGSVYCGELQHGIIEGFG--KMV--IPTTGLYVGNFKGGRFHGHGVYEMH 807
Query: 219 AKDSSIVKLFAGHWNSGI 236
KDS +++ G++ G+
Sbjct: 808 CKDSPESEVYEGNFCEGL 825
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 137 (53.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 33/91 (36%), Positives = 52/91 (57%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANME--PREIRALSGLGV 85
+L ++CGF H + L + G V+++G G GQLG+ G D N P ++AL G
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH---G-DVNSRGCPTLVQALPGPST 956
Query: 86 VQISAGGWHSAARTQDGFLYAWGWNNGGQVG 116
Q++AG H+AA DG ++ +G + GQ+G
Sbjct: 957 -QVTAGSNHTAALLMDGQVFTFGSFSKGQLG 986
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 178 CGVSQVSVMTRLSVPEH-VKNCPI-VKLFAEHWN 209
CG +Q + RL +P V+N KL A H N
Sbjct: 2018 CGTAQSEDVLRLLIPVRTVQNSGYGPKLTAVHEN 2051
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 33 DIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGG 92
DI+ G H L LT+ G ++S+G G LG +S + +P ++ L G + ISAG
Sbjct: 78 DISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKP-DLIDLPGKALC-ISAGD 135
Query: 93 WHSAARTQDGFLYAWG 108
HSA +DG ++AWG
Sbjct: 136 SHSACLLEDGRVFAWG 151
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 44/161 (27%), Positives = 73/161 (45%)
Query: 48 GIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGL-GVVQISAGGWHSAARTQDGFLYA 106
G V GNG GQLG G D +E + + ++G+ V ISAGG H+ T+ G +Y+
Sbjct: 42 GNVLVCGNGDVGQLGL---GEDI-LERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYS 97
Query: 107 WGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLWGC 166
+G N+ G +G + D P + D K + ++ G H+ L +D ++
Sbjct: 98 FGCNDEGALGRDTSEDGSESKPDLI----DLPG---KALCISAGDSHSACLLEDGRVFAW 150
Query: 167 GWNEYNQLSMGCGVSQVSVMTRLSVPEHVKNCPIVKLFAEH 207
G + +MG + + T + + E C I A+H
Sbjct: 151 GSFRDSHGNMGLTIDG-NKRTPIDLMEGTVCCSIAS-GADH 189
>ASPGD|ASPL0000075377 [details] [associations]
symbol:AN10609 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001303
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
EnsemblFungi:CADANIAT00005518 HOGENOM:HOG000197481 OMA:QRIECGR
Uniprot:C8V9T3
Length = 575
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 32/97 (32%), Positives = 54/97 (55%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSR-----GQLGYP----SSGTDANME-PREIRAL 80
+ I+ G +H L LT G VFS + + GQLG P ++ ++ P E++
Sbjct: 252 IVAISGGLEHVLLLTSSGRVFSAVSSTENFPSFGQLGVPGLTWATRPPGPVDAPHEVKTP 311
Query: 81 SGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGV 117
+G+ V QI+ G +HS T++G + A+G N+ GQ+G+
Sbjct: 312 NGVKVAQIATGDYHSLLLTKNGNVLAFGDNSFGQLGL 348
>SGD|S000000018 [details] [associations]
symbol:ATS1 "Protein required for modification of wobble
nucleosides in tRNA" species:4932 "Saccharomyces cerevisiae"
[GO:0007017 "microtubule-based process" evidence=IGI;ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IDA;IPI] [GO:0002098 "tRNA wobble uridine
modification" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IGI;IMP] [GO:0007117 "budding cell bud
growth" evidence=IGI;IMP] SGD:S000000018 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0000226 EMBL:L05146 EMBL:BK006935
GO:GO:0007117 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
PIR:S36714 RefSeq:NP_009382.2 ProteinModelPortal:P31386 SMR:P31386
IntAct:P31386 MINT:MINT-2786397 STRING:P31386 PeptideAtlas:P31386
EnsemblFungi:YAL020C GeneID:851213 KEGG:sce:YAL020C CYGD:YAL020c
eggNOG:COG5184 HOGENOM:HOG000163478 KO:K15462 OMA:GAGCATS
OrthoDB:EOG4H75MP NextBio:968094 Genevestigator:P31386
GermOnline:YAL020C GO:GO:0002098 Uniprot:P31386
Length = 333
Score = 113 (44.8 bits), Expect = 0.00037, P = 0.00037
Identities = 43/128 (33%), Positives = 60/128 (46%)
Query: 50 VFSWGNGSRGQLGYPSSGTDANME-P-REIRALSGLGVVQISAGGWHSAARTQDGFLYAW 107
V+++G+ + QLG G D +M+ P R + G V +I+ GG HS T DG L
Sbjct: 4 VYAFGSNGQRQLGL---GHDEDMDTPQRSVPGDDGAIVRKIACGGNHSVMLTNDGNLVGC 60
Query: 108 GWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGSRHTLALCDDNSLW--G 165
G N G++ L V HD P+ VVDVACG T+ + D +W G
Sbjct: 61 GDNRRGELDSAQALRQV-HDWRPVEVPAP-------VVDVACGWDTTVIVDADGRVWQRG 112
Query: 166 CGWNEYNQ 173
G E+ Q
Sbjct: 113 GGCYEFTQ 120
>UNIPROTKB|H0YD20 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 PANTHER:PTHR22870:SF7
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
Ensembl:ENST00000532546 Bgee:H0YD20 Uniprot:H0YD20
Length = 126
Score = 92 (37.4 bits), Expect = 0.00046, P = 0.00046
Identities = 34/103 (33%), Positives = 47/103 (45%)
Query: 73 EPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMS 132
EP + L + + AG HSA+ T G +Y WG N GQ+ E L V P +
Sbjct: 18 EPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAF-LPV--PQKIE 74
Query: 133 WSEDFDSQNIKVVDVACGSRHTLALCDDNSLWG-CGWNEYNQL 174
+ F QN KV + G H +A D G CG +E+ +L
Sbjct: 75 -AHCF--QNEKVTAIWSGWTHLVAQTDTELHSGRCG-DEFLEL 113
>WB|WBGene00017190 [details] [associations]
symbol:F07B7.12 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR027047
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005 EMBL:FO081059
GeneTree:ENSGT00390000011403 KO:K10693 PANTHER:PTHR12846
eggNOG:NOG240798 RefSeq:NP_505281.1 ProteinModelPortal:Q965Y9
SMR:Q965Y9 STRING:Q965Y9 PaxDb:Q965Y9 EnsemblMetazoa:F07B7.12
GeneID:184118 KEGG:cel:CELE_F07B7.12 UCSC:F07B7.12 CTD:184118
WormBase:F07B7.12 InParanoid:Q965Y9 OMA:KESRITH NextBio:923582
Uniprot:Q965Y9
Length = 1900
Score = 120 (47.3 bits), Expect = 0.00058, P = 0.00058
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 28 DLVVTDIACGFDHCLALTQEGIVFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQ 87
D+ V+ ++CG H + L + VF++G+ GQLG T + P+++ S +VQ
Sbjct: 766 DVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGV--GDTLSKNTPQQVILPSDTVIVQ 823
Query: 88 ISAGGWHSAARTQDGFLYAWGWNNGGQV 115
++AG H+ R DG ++ +G GQ+
Sbjct: 824 VAAGSNHTILRANDGSVFTFGAFGKGQL 851
>CGD|CAL0001466 [details] [associations]
symbol:orf19.5752 species:5476 "Candida albicans" [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR027046 CGD:CAL0001466
INTERPRO:IPR000408 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACQ01000046 EMBL:AACQ01000047 PROSITE:PS00626
PROSITE:PS50012 eggNOG:NOG75720 KO:K15072 PANTHER:PTHR22870:SF95
RefSeq:XP_718022.1 RefSeq:XP_718088.1 ProteinModelPortal:Q5A8J6
GeneID:3640308 GeneID:3640374 KEGG:cal:CaO19.13175
KEGG:cal:CaO19.5752 Uniprot:Q5A8J6
Length = 637
Score = 95 (38.5 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 56 GSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAGGWHSAARTQDGFLYAWGWNNG--G 113
G+ L Y +G D M+P I L G + +I G +H A T DG L +WG + G
Sbjct: 511 GNLHHLEYHDNGNDQGMKPIIIDELQGKNIKRIEIGDYHYLALTADGTLLSWGTESRFCG 570
Query: 114 QVGVEGKLDLVVHDPHPMSWSEDFDSQNIKV 144
+G+ K ++ D + + + + D+ +K+
Sbjct: 571 CLGLGSKQSIL--DQYTTTTNTE-DNDEVKL 598
Score = 62 (26.9 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 4 HLASGPLKMLSQVF-----HMPSRMDHFLDLVVTDI-ACGFDHCLALTQEGIVFSWGN 55
+L+ P++ S+ F H P+ +++F D ++ DI A GF + L +G +F GN
Sbjct: 100 NLSQVPIENRSENFGWMMVHTPTNINNFNDHIIVDIVATGFSFII-LANDGELFFTGN 156
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 76 (31.8 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 31 VTDIACGFDHCLALTQEGIVFSWGNGSRGQLG 62
+ DI+ G H + +T EG ++ G+G +GQLG
Sbjct: 147 IIDISAGLRHWICVTNEGNLYGCGDGRKGQLG 178
Score = 76 (31.8 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 85 VVQISAGGWHSAARTQDGFLYAWGWNNGGQVGVEGKLDL 123
+VQI++G H+ RT+ G + +GWN G + K D+
Sbjct: 282 IVQIASGTEHNILRTKKGSVLIYGWNEHGNASNDDKRDV 320
>GENEDB_PFALCIPARUM|MAL7P1.38 [details] [associations]
symbol:MAL7P1.38 "regulator of chromosome
condensation protein, putative" species:5833 "Plasmodium
falciparum" [GO:0005634 "nucleus" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0030261 "chromosome
condensation" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0003682
GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030261 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012
EMBL:AL844506 RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 38/144 (26%), Positives = 65/144 (45%)
Query: 33 DIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG 91
+I CG ++ + + V+ G + G G SS + + +I+ LS + Q+ G
Sbjct: 266 NIYCGGNNTYVQLENSLDVYGIGRNAYGSCGV-SSKDNIIKKFEKIQELSQKKINQLCGG 324
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
+ + LY WG N +G+E D + P + + F N V ++ CG+
Sbjct: 325 QSFTVCLLNNNDLYIWG--NREILGMEYDDD--AYSPLELDF---FKKNNYTVKNITCGT 377
Query: 152 RHTLALCDDNSL--WGCGWNEYNQ 173
H L L D+ L WG G NE+++
Sbjct: 378 DHCLVLTDNGKLFGWGTGGNEFDE 401
>UNIPROTKB|C0H4M6 [details] [associations]
symbol:MAL7P1.38 "Regulator of chromosome condensation,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS] [GO:0030261
"chromosome condensation" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0003682 GO:GO:0007049
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0030261
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012 EMBL:AL844506
RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 38/144 (26%), Positives = 65/144 (45%)
Query: 33 DIACGFDHCLALTQEGI-VFSWGNGSRGQLGYPSSGTDANMEPREIRALSGLGVVQISAG 91
+I CG ++ + + V+ G + G G SS + + +I+ LS + Q+ G
Sbjct: 266 NIYCGGNNTYVQLENSLDVYGIGRNAYGSCGV-SSKDNIIKKFEKIQELSQKKINQLCGG 324
Query: 92 GWHSAARTQDGFLYAWGWNNGGQVGVEGKLDLVVHDPHPMSWSEDFDSQNIKVVDVACGS 151
+ + LY WG N +G+E D + P + + F N V ++ CG+
Sbjct: 325 QSFTVCLLNNNDLYIWG--NREILGMEYDDD--AYSPLELDF---FKKNNYTVKNITCGT 377
Query: 152 RHTLALCDDNSL--WGCGWNEYNQ 173
H L L D+ L WG G NE+++
Sbjct: 378 DHCLVLTDNGKLFGWGTGGNEFDE 401
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.445 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 241 241 0.00094 113 3 11 22 0.42 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 220
No. of states in DFA: 617 (66 KB)
Total size of DFA: 228 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.79u 0.12s 19.91t Elapsed: 00:00:01
Total cpu time: 19.88u 0.12s 20.00t Elapsed: 00:00:01
Start: Thu Aug 15 15:29:59 2013 End: Thu Aug 15 15:30:00 2013
WARNINGS ISSUED: 1