BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16071
(225 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4FD5|A Chain A, Crystal Structure Of Arylalkylamine N-Acetyltransferase 2
From Aedes Aegypti
pdb|4FD6|A Chain A, Crystal Structure Of Native Arylalkylamine
N-Acetyltransferase 2 From The Yellow Fever Mosquito,
Aedes Aegypti
Length = 222
Score = 202 bits (514), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 142/204 (69%), Gaps = 2/204 (0%)
Query: 22 YNDVIEHLRYNFFADEPLNKCVGLCETGRGHSELELHSILTLQDNLSVMAVNGNGQVIGV 81
Y+DVIEHLR FFADEPLNK V L G+GH LE HS+ TL+DN+S+MA++ +G + GV
Sbjct: 19 YDDVIEHLRQTFFADEPLNKAVNLTRPGQGHPLLEQHSLSTLKDNVSIMAISNDGDIAGV 78
Query: 82 ALNGIQH-EGDVDEAIKKLETLNDKKFKQIFSMLYDLNQSLNLFSRYDVTSIFECRILSV 140
ALNGI + D++++ +KL + D+ FK+IF +LY+ N +NLF ++DV IFE RILSV
Sbjct: 79 ALNGILYGNTDIEKSREKLNEIQDESFKKIFKLLYEQNLKINLFKQFDVDKIFEIRILSV 138
Query: 141 DNNYRGRGLANELFKLSIDIASKAGFKVFKVDATGVFSQKISTKLGLETLIELEYRNHLD 200
D+ +RG+GLA +L + S ++A GF+V K DATG FSQ++ + LG T E+ Y ++LD
Sbjct: 139 DSRFRGKGLAKKLIEKSEELALDRGFQVMKTDATGAFSQRVVSSLGFITKCEINYTDYLD 198
Query: 201 SATGLPMFTPPSPHTSLKVMVKIL 224
G +F PH LK+M K++
Sbjct: 199 E-NGEQIFVVDPPHEKLKIMCKVI 221
>pdb|3V8I|A Chain A, Crystal Structure Of A Drosophila Melanogaster Dopamine N-
Acetyltransferase
pdb|3V8I|B Chain B, Crystal Structure Of A Drosophila Melanogaster Dopamine N-
Acetyltransferase
Length = 210
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 9/207 (4%)
Query: 18 PEDKYNDVIEHLRYNFFADEPLNKCVGLCETGRGHSELELHSILTLQDNLSVMAVNGNGQ 77
PED VI L+ FF DEPLN + L E ELE +S+ L DN S AVN G+
Sbjct: 9 PEDG-EAVIAMLKTFFFKDEPLNTFLDLGEC----KELEKYSLKPLPDNCSYKAVNKKGE 63
Query: 78 VIGVALNGIQHEGDVDEAIKKL-ETLNDKKFKQIFSMLYDLNQSLNLFSRY-DVTSIFEC 135
+IGV LNG+ D+ +K ++ KFK+I S++ + + N+F Y D I +
Sbjct: 64 IIGVFLNGLMRRPSPDDVPEKAADSCEHPKFKKILSLMDHVEEQFNIFDVYPDEELILDG 123
Query: 136 RILSVDNNYRGRGLANELFKLSIDIASKAGFKVFKVDATGVFSQKISTKLGLETLIELEY 195
+ILSVD NYRG G+A L + + + + G V+ V + +S ++ KLG + +++
Sbjct: 124 KILSVDTNYRGLGIAGRLTERAYEYMRENGINVYHVLCSSHYSARVMEKLGFHEVFRMQF 183
Query: 196 RNHLDSATGLPMFTPPSPHTSLKVMVK 222
++ G +F P +PH ++VM K
Sbjct: 184 ADY--KPQGEVVFKPAAPHVGIQVMAK 208
>pdb|3TE4|A Chain A, Crystal Structure Of Dopamine N Acetyltransferase In
Complex With Acetyl-Coa From Drosophila Melanogaster
Length = 215
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 9/207 (4%)
Query: 18 PEDKYNDVIEHLRYNFFADEPLNKCVGLCETGRGHSELELHSILTLQDNLSVMAVNGNGQ 77
PED VI L+ FF DEPLN + L E ELE +S+ L DN S AVN G+
Sbjct: 14 PEDG-EAVIAMLKTFFFKDEPLNTFLDLGEC----KELEKYSLKPLPDNCSYKAVNKKGE 68
Query: 78 VIGVALNGIQHEGDVDEAIKKL-ETLNDKKFKQIFSMLYDLNQSLNLFSRY-DVTSIFEC 135
+IGV LNG+ D+ +K ++ KFK+I S++ + + N+F Y D I +
Sbjct: 69 IIGVFLNGLMRRPSPDDVPEKAADSCEHPKFKKILSLMDHVEEQFNIFDVYPDEELILDG 128
Query: 136 RILSVDNNYRGRGLANELFKLSIDIASKAGFKVFKVDATGVFSQKISTKLGLETLIELEY 195
+ILSVD NYRG G+A L + + + + G V+ V + +S ++ KLG + +++
Sbjct: 129 KILSVDTNYRGLGIAGRLTERAYEYMRENGINVYHVLCSSHYSARVMEKLGFHEVFRMQF 188
Query: 196 RNHLDSATGLPMFTPPSPHTSLKVMVK 222
++ G +F P +PH ++VM K
Sbjct: 189 ADY--KPQGEVVFKPAAPHVGIQVMAK 213
>pdb|4FD4|A Chain A, Crystal Structure Of Mosquito Arylalkylamine
N-Acetyltransferase Like 5b
pdb|4FD4|B Chain B, Crystal Structure Of Mosquito Arylalkylamine
N-Acetyltransferase Like 5b
Length = 217
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Query: 64 QDNLSVMAVNGNGQVIGVALNGIQHEGDVDEAIKKLETLNDKKFKQIFSMLYDLNQSLNL 123
Q + V + + IGV++ G GD D +++ T KK+ I +L L ++ ++
Sbjct: 58 QGTVVVAEDSAAKKFIGVSIAGPIQPGDPDAMVEEAATTETKKWGDILKLLALLERTADV 117
Query: 124 FSRYDVTSIFECRILSVDNNYRGRGLANELFKLSIDIASKAGFKVFKVDATGVFSQKIST 183
RY + + IL+VD YRG L L + +D++ K GFK D T VFS K++
Sbjct: 118 CGRYGLEKAYHVHILAVDPTYRGHSLGQRLLQFQMDLSKKLGFKAISGDFTSVFSVKLAE 177
Query: 184 KLGLETLIELEYRNHLDSATGLPMFTPPSPHTSLKVMVKIL 224
KLG+E + +L ++ D G +F P H +K VK+L
Sbjct: 178 KLGMECISQLALGDYRDE-KGEKLFEPLDVHQVIKTCVKLL 217
>pdb|4FD7|A Chain A, Crystal Structure Of Insect Putative Arylalkylamine N-
Acetyltransferase 7 From The Yellow Fever Mosquito Aedes
Aegypt
pdb|4FD7|B Chain B, Crystal Structure Of Insect Putative Arylalkylamine N-
Acetyltransferase 7 From The Yellow Fever Mosquito Aedes
Aegypt
pdb|4FD7|C Chain C, Crystal Structure Of Insect Putative Arylalkylamine N-
Acetyltransferase 7 From The Yellow Fever Mosquito Aedes
Aegypt
pdb|4FD7|D Chain D, Crystal Structure Of Insect Putative Arylalkylamine N-
Acetyltransferase 7 From The Yellow Fever Mosquito Aedes
Aegypt
Length = 238
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 14 VYPIPEDKYNDVIEHLRYNFFADEPLNKCVGLCETGRGHSELELHSILTLQDNLSVMAVN 73
V +PED++ D I H+ F DE +N+ GL + ++ L D +S++
Sbjct: 33 VQDLPEDRFEDAIRHMCDYFARDELMNQAKGLAKDLVAMGDVVALWKAMLPDRMSLVCFR 92
Query: 74 -GNGQVIGVALNGIQHEGDVDEAIKKLETLNDKKFKQIFSMLYDLNQSLNLFSRYDVTSI 132
G+ +++GV + + D D A N F+ I+ + ++ N+F RY+V
Sbjct: 93 EGSDEIVGVNILDVASRSDKDNA-----QFNSAIFQAIYDTIEYVSHQANIFDRYNVDHY 147
Query: 133 FECRILSVDNNYRGRGLANELFKLSIDIASKAGFKVFKVDATGVFSQKISTKLGLETLIE 192
LSVD YRGRG+A E+ + I + G K+ TG SQ +T++G +
Sbjct: 148 LNAMGLSVDPKYRGRGIATEILRARIPLCRAVGLKLSATCFTGPNSQTAATRVGFQEDFT 207
Query: 193 LEY 195
+ Y
Sbjct: 208 ITY 210
>pdb|3QB8|A Chain A, Paramecium Chlorella Bursaria Virus1 Putative Orf A654l Is
A Polyamine Acetyltransferase
pdb|3QB8|B Chain B, Paramecium Chlorella Bursaria Virus1 Putative Orf A654l Is
A Polyamine Acetyltransferase
Length = 197
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 137 ILSVDNNYRGRGLANELFKLSIDIASKAGFKVFKVDATGVFSQKISTKLGLETLIELEYR 196
+ ++ + G+GLA +L K +I+ +S GFK D T + SQ + K G ET+ ++Y+
Sbjct: 112 VFAIGSEVTGKGLATKLLKKTIEESSSHGFKYIYGDCTNIISQNMFEKHGFETVGSVKYK 171
Query: 197 NH 198
+
Sbjct: 172 GY 173
>pdb|2ZS6|B Chain B, Ha3 Subcomponent Of Botulinum Type C Progenitor Toxin
pdb|4EN6|B Chain B, Crystal Structure Of Ha70 (Ha3) Subcomponent Of
Clostridium Botulinum Type C Progenitor Toxin In Complex
With Alpha 2-3-Sialyllactose
pdb|4EN7|B Chain B, Crystal Structure Of Ha70 (Ha3) Subcomponent Of
Clostridium Botulinum Type C Progenitor Toxin In Complex
With Alpha 2-3-Sialyllactosamine
pdb|4EN8|B Chain B, Crystal Structure Of Ha70 (Ha3) Subcomponent Of
Clostridium Botulinum Type C Progenitor Toxin In Complex
With Alpha 2-6-Sialyllactose
pdb|4EN9|B Chain B, Crystal Structure Of Ha70 (Ha3) Subcomponent Of
Clostridium Botulinum Type C Progenitor Toxin In Complex
With Alpha 2-6-Sialyllactosamine
Length = 420
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 154 FKLSIDIASKAGFKVFKVDATGVFSQKISTKLGLETLIELE 194
+ + I + A + +FKV+ TGV+ KI+TK L LI E
Sbjct: 189 YNIPTSIQNNACYVLFKVNTTGVY--KITTKNNLPPLIIYE 227
>pdb|2ZOE|B Chain B, Ha3 Subcomponent Of Clostridium Botulinum Type C
Progenitor Toxin, Complex With N-Acetylneuramic Acid
Length = 420
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 154 FKLSIDIASKAGFKVFKVDATGVFSQKISTKLGLETLIELE 194
+ + I + A + +FKV+ TGV+ KI+TK L LI E
Sbjct: 189 YNIPTSIQNNACYVLFKVNTTGVY--KITTKNNLPPLIIYE 227
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 70 MAVNGNGQVIGVALNGIQHEGDVDEAIKKLETL 102
+++N NG+V G++L G G V +AI +L L
Sbjct: 75 VSLNSNGRVTGLSLEGFGASGRVPDAIGQLTEL 107
>pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The
E2.2k+.Pi State
pdb|3A3Y|A Chain A, Crystal Structure Of The Sodium-potassium Pump With Bound
Potassium And Ouabain
Length = 1028
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 15 YPIPEDKYNDVIEHLRYNFFADEPLNKCVGLCETG 49
+ +PEDKYN+ Y F ADEP LC G
Sbjct: 563 FALPEDKYNE-----GYPFDADEPNFPTTDLCFVG 592
>pdb|2ZAU|A Chain A, Crystal Structure Of An N-Terminally Truncated
Selenophosphate Synthetase From Aquifex Aeolicus
pdb|2ZAU|B Chain B, Crystal Structure Of An N-Terminally Truncated
Selenophosphate Synthetase From Aquifex Aeolicus
pdb|2ZAU|C Chain C, Crystal Structure Of An N-Terminally Truncated
Selenophosphate Synthetase From Aquifex Aeolicus
Length = 311
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 44 GLCETGR--GHSELELHSILTLQDNLSVMAVNGNGQVIGVALNGIQHEGDVDEAIKKLET 101
G+C G+ S ++ +L L + G G +I GI E D++EAI+ +
Sbjct: 122 GICPEGKYITQSGAQVGQLLILTKPI------GTGILIKGLKEGILKEEDINEAIENMLA 175
Query: 102 LNDKKFKQIFSM 113
LNDK + S+
Sbjct: 176 LNDKARNLMLSL 187
>pdb|1U6M|A Chain A, The Crystal Structure Of Acetyltransferase
pdb|1U6M|B Chain B, The Crystal Structure Of Acetyltransferase
pdb|1U6M|C Chain C, The Crystal Structure Of Acetyltransferase
pdb|1U6M|D Chain D, The Crystal Structure Of Acetyltransferase
Length = 199
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/103 (20%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 100 ETLNDKKFKQIFSMLYDLNQSLNLFSRYD-VTSIFECRILSVDNNYRGRGLANELFKLSI 158
E + D+ +++F + L + + LF + + + + +SVD +RG G+ ++L
Sbjct: 80 EKIIDEPLREVFKK-HGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALP 138
Query: 159 DIASKAGFKV--FKVDATGVFSQKISTKLGLETLIELEYRNHL 199
++A +G + VD ++K+ G + + + HL
Sbjct: 139 EVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTMTISGHL 181
>pdb|2YYE|A Chain A, Crystal Structure Of Selenophosphate Synthetase From
Aquifex Aeolicus Complexed With Ampcpp
pdb|2YYE|B Chain B, Crystal Structure Of Selenophosphate Synthetase From
Aquifex Aeolicus Complexed With Ampcpp
pdb|2ZOD|A Chain A, Crystal Structure Of Selenophosphate Synthetase From
Aquifex Aeolicus
pdb|2ZOD|B Chain B, Crystal Structure Of Selenophosphate Synthetase From
Aquifex Aeolicus
Length = 345
Score = 26.9 bits (58), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 44 GLCETGR--GHSELELHSILTLQDNLSVMAVNGNGQVIGVALNGIQHEGDVDEAIKKLET 101
G+C G+ S ++ +L L + G G +I GI E D++EAI+ +
Sbjct: 156 GICPEGKYITQSGAQVGQLLILTKPI------GTGILIKGLKEGILKEEDINEAIENMLA 209
Query: 102 LNDKKFKQIFSM 113
LNDK + S+
Sbjct: 210 LNDKARNLMLSL 221
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,295,785
Number of Sequences: 62578
Number of extensions: 248316
Number of successful extensions: 695
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 671
Number of HSP's gapped (non-prelim): 20
length of query: 225
length of database: 14,973,337
effective HSP length: 95
effective length of query: 130
effective length of database: 9,028,427
effective search space: 1173695510
effective search space used: 1173695510
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)