BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16075
(241 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9JK84|PAR6G_MOUSE Partitioning defective 6 homolog gamma OS=Mus musculus GN=Pard6g
PE=2 SV=1
Length = 382
Score = 137 bits (344), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Query: 1 VPGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60
VPGIFISR+VPGGLAESTGLLAVNDEVLEVNGI VAGK+LDQVTDMM+ANS NLI+TVKP
Sbjct: 190 VPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKP 249
Query: 61 ANQRANMSVPRRGSYSRT-SQLSSDSHQSTQSIATTNNSEDDEQDEVVDL 109
ANQR N+ R S S S S+ SH S NSED E DE D+
Sbjct: 250 ANQRNNVVRSSRTSGSSVHSTDSTTSHHSLPGAHVLQNSEDVESDEEADI 299
>sp|Q9JK83|PAR6B_MOUSE Partitioning defective 6 homolog beta OS=Mus musculus GN=Pard6b
PE=1 SV=2
Length = 371
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 96/140 (68%), Gaps = 7/140 (5%)
Query: 1 VPGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60
VPGIFISRLVPGGLA+STGLLAVNDEVLEVNGI V+GKSLDQVTDMM+ANS NLIITV+P
Sbjct: 189 VPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRP 248
Query: 61 ANQRANMSVPRRGSYSRTSQLSSDSH-----QSTQSIATTNNSEDDEQDEVVDLTGITLE 115
ANQR N V R S +S S+D+ Q ++ + + DE D +++ +G +
Sbjct: 249 ANQRNN--VVRNSRTSGSSSQSTDNSLLGFPQQVEASFEPEDQDSDEDDIIIEDSGEPQQ 306
Query: 116 ICRIEPSTNSDIFERTKIVF 135
I + P+ + + + ++ F
Sbjct: 307 IPKATPAQSLESLTQIELSF 326
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 173 RSKNIISTFLGGTPGKTKSHITISNPQDFR 202
R KN++S L + K HI IS PQDFR
Sbjct: 111 RKKNMLSNVLRPDNHRKKPHIVISMPQDFR 140
>sp|Q9BYG5|PAR6B_HUMAN Partitioning defective 6 homolog beta OS=Homo sapiens GN=PARD6B
PE=1 SV=1
Length = 372
Score = 123 bits (309), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 72/89 (80%), Gaps = 8/89 (8%)
Query: 1 VPGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60
VPGIFISRLVPGGLA+STGLLAVNDEVLEVNGI V+GKSLDQVTDMM+ANS NLIITV+P
Sbjct: 189 VPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRP 248
Query: 61 ANQRANMSVPRRGSYSRTSQLSSDSHQST 89
ANQR N+ R S+ S S QST
Sbjct: 249 ANQRNNV--------VRNSRTSGSSGQST 269
>sp|Q9BYG4|PAR6G_HUMAN Partitioning defective 6 homolog gamma OS=Homo sapiens GN=PARD6G
PE=1 SV=1
Length = 376
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 64/67 (95%)
Query: 1 VPGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60
VPGIFISR+VPGGLAESTGLLAVNDEVLEVNGI VAGK+LDQVTDMM+ANS NLI+TVKP
Sbjct: 190 VPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKP 249
Query: 61 ANQRANM 67
ANQR N+
Sbjct: 250 ANQRNNV 256
>sp|Q6B4M5|PAR6A_RAT Partitioning defective 6 homolog alpha OS=Rattus norvegicus
GN=Pard6a PE=2 SV=2
Length = 346
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/83 (75%), Positives = 70/83 (84%), Gaps = 3/83 (3%)
Query: 1 VPGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60
VPGIFISRLV GGLAESTGLLAV+DE+LEVNGI VAGK+LDQVTDMMVANS NLI+TVKP
Sbjct: 189 VPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKP 248
Query: 61 ANQRANMSVPRRGSYSRTSQLSS 83
ANQR N+ RG+ R + SS
Sbjct: 249 ANQRNNVV---RGASGRLTGPSS 268
>sp|Q9Z101|PAR6A_MOUSE Partitioning defective 6 homolog alpha OS=Mus musculus GN=Pard6a
PE=1 SV=2
Length = 346
Score = 117 bits (293), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/83 (75%), Positives = 70/83 (84%), Gaps = 3/83 (3%)
Query: 1 VPGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60
VPGIFISRLV GGLAESTGLLAV+DE+LEVNGI VAGK+LDQVTDMMVANS NLI+TVKP
Sbjct: 189 VPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKP 248
Query: 61 ANQRANMSVPRRGSYSRTSQLSS 83
ANQR N+ RG+ R + SS
Sbjct: 249 ANQRNNVV---RGASGRLTGPSS 268
>sp|Q9NPB6|PAR6A_HUMAN Partitioning defective 6 homolog alpha OS=Homo sapiens GN=PARD6A
PE=1 SV=1
Length = 346
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 63/67 (94%)
Query: 1 VPGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60
VPGIFISRLV GGLAESTGLLAV+DE+LEVNGI VAGK+LDQVTDMMVANS NLI+TVKP
Sbjct: 189 VPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKP 248
Query: 61 ANQRANM 67
ANQR N+
Sbjct: 249 ANQRNNV 255
>sp|Q9NAN2|PAR6_CAEEL Partitioning defective protein 6 OS=Caenorhabditis elegans GN=par-6
PE=1 SV=2
Length = 309
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/68 (83%), Positives = 60/68 (88%)
Query: 1 VPGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60
V GIFISRLV GGLAESTGLL VNDEVLEVNGI V GK+LDQVTDMMVAN+ NLIITVKP
Sbjct: 188 VSGIFISRLVDGGLAESTGLLGVNDEVLEVNGIEVLGKTLDQVTDMMVANAHNLIITVKP 247
Query: 61 ANQRANMS 68
ANQR +S
Sbjct: 248 ANQRNTLS 255
>sp|Q5RDQ2|MPP5_PONAB MAGUK p55 subfamily member 5 OS=Pongo abelii GN=MPP5 PE=2 SV=1
Length = 675
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63
+ ISR+V GG AE +GLL DEVLE+NGI + GK +++V D++ L + P+ Q
Sbjct: 278 VIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQ 337
>sp|Q8N3R9|MPP5_HUMAN MAGUK p55 subfamily member 5 OS=Homo sapiens GN=MPP5 PE=1 SV=3
Length = 675
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63
+ ISR+V GG AE +GLL DEVLE+NGI + GK +++V D++ L + P+ Q
Sbjct: 278 VIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQ 337
>sp|Q9JLB2|MPP5_MOUSE MAGUK p55 subfamily member 5 OS=Mus musculus GN=Mpp5 PE=1 SV=1
Length = 675
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63
+ ISR+V GG AE +GLL DEVLE+NGI + GK +++V D++ L + P+ Q
Sbjct: 278 VIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQ 337
>sp|Q8JHF4|MPP5A_DANRE MAGUK p55 subfamily member 5-A OS=Danio rerio GN=mpp5a PE=1 SV=2
Length = 677
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63
+ ISR+V GG AE +GLL DE+LE+NG+ + GK +++V D++ L + P+ Q
Sbjct: 280 VVISRIVKGGAAERSGLLHEGDEILEINGVEIRGKDVNEVFDILADMHGVLSFVLIPSAQ 339
>sp|O88910|MPP3_MOUSE MAGUK p55 subfamily member 3 OS=Mus musculus GN=Mpp3 PE=1 SV=2
Length = 568
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62
+ ++R++ GG A+ +GL+ V DE+ EVNGI V K D+++ ++ + ++ + + PA
Sbjct: 159 AVVVARIMRGGAADRSGLVHVGDELREVNGIAVLHKRPDEISQILAQSQGSITLKIIPAT 218
Query: 63 QRAN 66
Q +
Sbjct: 219 QEED 222
>sp|O88954|MPP3_RAT MAGUK p55 subfamily member 3 OS=Rattus norvegicus GN=Mpp3 PE=1 SV=3
Length = 585
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62
+ ++R++ GG A+ +GL+ V DE+ EVNGI V K D+++ ++ + ++ + + PA
Sbjct: 159 AVVVARIMRGGAADRSGLVHVGDELREVNGITVLHKRPDEISQILAQSQGSITLKIIPAT 218
Query: 63 QRAN 66
Q +
Sbjct: 219 QEED 222
>sp|Q13368|MPP3_HUMAN MAGUK p55 subfamily member 3 OS=Homo sapiens GN=MPP3 PE=1 SV=2
Length = 585
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62
+ ++R++ GG A+ +GL+ V DE+ EVNGI V K D+++ ++ + ++ + + PA
Sbjct: 159 AVVVARIMRGGAADRSGLVHVGDELREVNGIAVLHKRPDEISQILAQSQGSITLKIIPAT 218
Query: 63 QRAN 66
Q +
Sbjct: 219 QEED 222
>sp|Q96JB8|MPP4_HUMAN MAGUK p55 subfamily member 4 OS=Homo sapiens GN=MPP4 PE=1 SV=2
Length = 637
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62
I ++R++ GGLAE +GLL D+++EVNG+ V G +QV ++ + ++ V P +
Sbjct: 177 ILVARIIHGGLAERSGLLYAGDKLVEVNGVSVEGLDPEQVIHILAMSRGTIMFKVVPVS 235
>sp|Q9EQJ9|MAGI3_MOUSE Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 3 OS=Mus musculus GN=Magi3 PE=1 SV=2
Length = 1476
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 14/87 (16%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMM--VANSSNLIITVKPA 61
I+I ++P G AE G L DE++ ++GI V GKS QV D+M A + ++++TV
Sbjct: 753 IYIGAIIPLGAAEKDGRLRAADELMCIDGIPVKGKSHKQVLDLMTTAARNGHVLLTV--- 809
Query: 62 NQRANMSVPRRGSYSRTSQLSSDSHQS 88
RR + Q +SHQ+
Sbjct: 810 ---------RRKIFYGEKQPEDESHQA 827
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
G+FI RL G A G + V D+++E+NG G + + +++ A + +++ ++P
Sbjct: 1045 GLFILRLAEDGPAIKDGRIHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLLLLRPG 1103
>sp|Q5TCQ9|MAGI3_HUMAN Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 3 OS=Homo sapiens GN=MAGI3 PE=1 SV=2
Length = 1506
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 16/97 (16%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMM--VANSSNLIITVKPA 61
I+I ++P G AE G L DE++ ++GI V GKS QV D+M A + ++++TV
Sbjct: 775 IYIGAIIPLGAAEKDGRLRAADELMCIDGIPVKGKSHKQVLDLMTTAARNGHVLLTV--- 831
Query: 62 NQRANMSVPRRGSYSRTSQLSSDSHQSTQSIATTNNS 98
RR + Q DS Q+ I+T N S
Sbjct: 832 ---------RRKIFYGEKQPEDDSSQAF--ISTQNGS 857
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
G+FI RL G A G + V D+++E+NG G + + +++ A + +++ ++P
Sbjct: 1069 GLFILRLAEDGPAIKDGRIHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLLLLRPG 1127
>sp|Q9Z250|LIN7A_RAT Protein lin-7 homolog A OS=Rattus norvegicus GN=Lin7a PE=1 SV=2
Length = 232
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVA--NSSNLIITVKP 60
I+ISR++PGG+AE G L D++L VNG+ V G+ ++ +++ A +S L++ P
Sbjct: 132 IYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAKDSVKLVVRYTP 190
>sp|Q8JZS0|LIN7A_MOUSE Protein lin-7 homolog A OS=Mus musculus GN=Lin7a PE=1 SV=2
Length = 233
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVA--NSSNLIITVKP 60
I+ISR++PGG+AE G L D++L VNG+ V G+ ++ +++ A +S L++ P
Sbjct: 132 IYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAKDSVKLVVRYTP 190
>sp|O14910|LIN7A_HUMAN Protein lin-7 homolog A OS=Homo sapiens GN=LIN7A PE=1 SV=2
Length = 233
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVA--NSSNLIITVKP 60
I+ISR++PGG+AE G L D++L VNG+ V G+ ++ +++ A +S L++ P
Sbjct: 132 IYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAKDSVKLVVRYTP 190
>sp|Q32LM6|LIN7A_BOVIN Protein lin-7 homolog A OS=Bos taurus GN=LIN7A PE=2 SV=1
Length = 233
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVA--NSSNLIITVKP 60
I+ISR++PGG+AE G L D++L VNG+ V G+ ++ +++ A +S L++ P
Sbjct: 132 IYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAKDSVKLVVRYTP 190
>sp|Q9JK71|MAGI3_RAT Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 3 OS=Rattus norvegicus GN=Magi3 PE=1 SV=2
Length = 1470
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMM--VANSSNLIITVK 59
I+I ++P G AE G L DE++ ++GI V GKS QV D+M A + ++++TV+
Sbjct: 753 IYIGAIIPLGAAEKDGRLRAADELMCIDGIPVKGKSHKQVLDLMTTAARNGHVLLTVR 810
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
G+FI RL G A G + V D+++E+NG G + + +++ A + +++ ++P
Sbjct: 1045 GLFILRLAEDGPAIKDGRIHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLLLLRPG 1103
>sp|Q9PU36|PCLO_CHICK Protein piccolo (Fragment) OS=Gallus gallus GN=PCLO PE=2 SV=1
Length = 5120
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
G +I++++PGG AE TG L +VLE NGI + GK+ ++V ++++ I V+
Sbjct: 4449 GAYIAKVLPGGNAEQTGKLIEGMQVLEWNGIPLTGKTYEEVQNIIIQQCGEAEICVR 4505
>sp|Q6P7F1|MPP4_MOUSE MAGUK p55 subfamily member 4 OS=Mus musculus GN=Mpp4 PE=1 SV=1
Length = 635
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62
I ++R++ GGL E +GLL D+++EVNG+ V G +QV ++ + ++ V P +
Sbjct: 176 ILVARVIHGGLVERSGLLYAGDKLVEVNGVSVEGLDPEQVIHILAMSCGTIMFKVIPVS 234
>sp|Q9QYH1|MPP4_RAT MAGUK p55 subfamily member 4 OS=Rattus norvegicus GN=Mpp4 PE=1
SV=1
Length = 441
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62
I ++R++ GGL E GLL D+++EVNG+ V G +QV ++ + ++ V P +
Sbjct: 26 ILVARVIHGGLVERNGLLYAGDKLVEVNGVPVEGLDPEQVIHILAMSCGTIMFKVIPVS 84
>sp|Q5F425|LIN7C_CHICK Protein lin-7 homolog C OS=Gallus gallus GN=LIN7C PE=1 SV=1
Length = 197
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
I+ISR++PGG+A+ G L D++L VNG+ V G+ ++ +++ A + + V+
Sbjct: 117 IYISRIIPGGIADRHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAQGKVKLVVR 172
>sp|Q792I0|LIN7C_RAT Protein lin-7 homolog C OS=Rattus norvegicus GN=Lin7c PE=1 SV=1
Length = 197
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
I+ISR++PGG+A+ G L D++L VNG+ V G+ ++ +++ A + + V+
Sbjct: 117 IYISRIIPGGIADRHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAQGKVKLVVR 172
>sp|Q5RAA5|LIN7C_PONAB Protein lin-7 homolog C OS=Pongo abelii GN=LIN7C PE=2 SV=1
Length = 197
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
I+ISR++PGG+A+ G L D++L VNG+ V G+ ++ +++ A + + V+
Sbjct: 117 IYISRIIPGGIADRHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAQGKVKLVVR 172
>sp|O88952|LIN7C_MOUSE Protein lin-7 homolog C OS=Mus musculus GN=Lin7c PE=1 SV=2
Length = 197
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
I+ISR++PGG+A+ G L D++L VNG+ V G+ ++ +++ A + + V+
Sbjct: 117 IYISRIIPGGIADRHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAQGKVKLVVR 172
>sp|Q9NUP9|LIN7C_HUMAN Protein lin-7 homolog C OS=Homo sapiens GN=LIN7C PE=1 SV=1
Length = 197
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
I+ISR++PGG+A+ G L D++L VNG+ V G+ ++ +++ A + + V+
Sbjct: 117 IYISRIIPGGIADRHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAQGKVKLVVR 172
>sp|Q0P5F3|LIN7C_BOVIN Protein lin-7 homolog C OS=Bos taurus GN=LIN7C PE=2 SV=1
Length = 197
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
I+ISR++PGG+A+ G L D++L VNG+ V G+ ++ +++ A + + V+
Sbjct: 117 IYISRIIPGGIADRHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAQGKVKLVVR 172
>sp|Q62915|CSKP_RAT Peripheral plasma membrane protein CASK OS=Rattus norvegicus
GN=Cask PE=1 SV=1
Length = 909
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 5 FISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64
++R++ GG+ G L V DE+ E+NGI VA ++++Q+ M+ ++ + P+ R
Sbjct: 514 IVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS-YR 572
Query: 65 ANMSVPRRGSYSRTSQLSSDSHQST 89
S R S S + Q ++ H ST
Sbjct: 573 TQSSSCERDSPSTSRQSPANGHSST 597
>sp|O70589|CSKP_MOUSE Peripheral plasma membrane protein CASK OS=Mus musculus GN=Cask
PE=1 SV=2
Length = 926
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 5 FISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64
++R++ GG+ G L V DE+ E+NGI VA ++++Q+ M+ ++ + P+ R
Sbjct: 514 IVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS-YR 572
Query: 65 ANMSVPRRGSYSRTSQLSSDSHQST 89
S R S S + Q ++ H ST
Sbjct: 573 TQSSSCERDSPSTSRQSPANGHSST 597
>sp|O14936|CSKP_HUMAN Peripheral plasma membrane protein CASK OS=Homo sapiens GN=CASK
PE=1 SV=3
Length = 926
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 5 FISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64
++R++ GG+ G L V DE+ E+NGI VA ++++Q+ M+ ++ + P+ R
Sbjct: 514 IVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS-YR 572
Query: 65 ANMSVPRRGSYSRTSQLSSDSHQST 89
S R S S + Q ++ H ST
Sbjct: 573 TQSSSCERDSPSTSRQSPANGHSST 597
>sp|Q9HAP6|LIN7B_HUMAN Protein lin-7 homolog B OS=Homo sapiens GN=LIN7B PE=1 SV=1
Length = 207
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
I+ISR++PGG+A+ G L D++L VNG+ V G+ ++ +++ A ++ + V+
Sbjct: 117 IYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVKLVVR 172
>sp|Q8K4V4|SNX27_RAT Sorting nexin-27 OS=Rattus norvegicus GN=Snx27 PE=1 SV=2
Length = 539
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 9/188 (4%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITV--K 59
P +S ++PGG A+ G+ D +LEVNG+ V G + QV D++ A LI+TV
Sbjct: 75 PLQHVSAVLPGGAADRAGVRK-GDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSV 133
Query: 60 PANQRANMSVPRRGSYSRTSQLSSDSHQSTQSIATTNNSEDD-EQDEVVDLTGITLEICR 118
P ++ N+ P S ++ ++ S+ T + E + E+ V ++ ++C
Sbjct: 134 PPHEADNLD-PSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEKFVVYNVYMAGRQLCS 192
Query: 119 IEPSTNSDIFERTKIVFV-FTMLSKTTKW---MSDMNGHALRILARESLEELSNYASSRS 174
+ + + K F FT KW +S+ A R E LE++ +
Sbjct: 193 KRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGE 252
Query: 175 KNIISTFL 182
+I+ FL
Sbjct: 253 SDIMQEFL 260
>sp|Q3UHD6|SNX27_MOUSE Sorting nexin-27 OS=Mus musculus GN=Snx27 PE=1 SV=2
Length = 539
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 9/188 (4%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITV--K 59
P +S ++PGG A+ G+ D +LEVNG+ V G + QV D++ A LI+TV
Sbjct: 75 PLQHVSAVLPGGAADRAGVRK-GDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSV 133
Query: 60 PANQRANMSVPRRGSYSRTSQLSSDSHQSTQSIATTNNSEDD-EQDEVVDLTGITLEICR 118
P ++ N+ P S ++ ++ S+ T + E + E+ V ++ ++C
Sbjct: 134 PPHEADNLD-PSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEKFVVYNVYMAGRQLCS 192
Query: 119 IEPSTNSDIFERTKIVFV-FTMLSKTTKW---MSDMNGHALRILARESLEELSNYASSRS 174
+ + + K F FT KW +S+ A R E LE++ +
Sbjct: 193 KRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGE 252
Query: 175 KNIISTFL 182
+I+ FL
Sbjct: 253 SDIMQEFL 260
>sp|A5PKA5|SNX27_BOVIN Sorting nexin-27 OS=Bos taurus GN=SNX27 PE=2 SV=1
Length = 541
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 9/188 (4%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITV--K 59
P +S ++PGG A+ G+ D +LEVNG+ V G + QV D++ A LI+TV
Sbjct: 77 PLQHVSAVLPGGAADRAGVRK-GDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSV 135
Query: 60 PANQRANMSVPRRGSYSRTSQLSSDSHQSTQSIATTNNSEDD-EQDEVVDLTGITLEICR 118
P ++ N+ P S ++ ++ S+ T + E + E+ V ++ ++C
Sbjct: 136 PPHEADNLD-PSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEKFVVYNVYMAGRQLCS 194
Query: 119 IEPSTNSDIFERTKIVFV-FTMLSKTTKW---MSDMNGHALRILARESLEELSNYASSRS 174
+ + + K F FT KW +S+ A R E LE++ +
Sbjct: 195 KRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGE 254
Query: 175 KNIISTFL 182
+I+ FL
Sbjct: 255 SDIMQEFL 262
>sp|Q2KIB6|LIN7B_BOVIN Protein lin-7 homolog B OS=Bos taurus GN=LIN7B PE=2 SV=1
Length = 201
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
I+ISR++PGG+A+ G L D++L VNG+ V G+ ++ +++ A ++ + V+
Sbjct: 117 IYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVKLVVR 172
>sp|Q9Z252|LIN7B_RAT Protein lin-7 homolog B OS=Rattus norvegicus GN=Lin7b PE=1 SV=1
Length = 207
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
I+ISR++PGG+A+ G L D++L VNG+ V G+ ++ +++ A ++ + V+
Sbjct: 117 IYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAQGSVKLVVR 172
>sp|O88951|LIN7B_MOUSE Protein lin-7 homolog B OS=Mus musculus GN=Lin7b PE=1 SV=2
Length = 207
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
I+ISR++PGG+A+ G L D++L VNG+ V G+ ++ +++ A ++ + V+
Sbjct: 117 IYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAQGSVKLVVR 172
>sp|Q5F488|MAGI3_CHICK Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 3 OS=Gallus gallus GN=MAGI3 PE=2 SV=1
Length = 1128
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSN--LIITVK 59
I+I ++P G AE G L DE++ ++G+ V GKS QV D+M + + N +++TV+
Sbjct: 752 IYIGAIIPLGAAEKDGRLRAADELMCIDGVPVKGKSHKQVLDLMTSAARNGQVLLTVR 809
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
G+FI RL G A G + V D+++E+NG G + + +++ A + +++ ++P
Sbjct: 1047 GLFILRLAEDGPAVKDGRVHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLLLLRPG 1105
>sp|A1A5G4|MAGI3_XENTR Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 3 OS=Xenopus tropicalis GN=magi3 PE=2 SV=1
Length = 1107
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMM--VANSSNLIITVK 59
I+I ++P G AE G L DE++ ++G+ V GKS QV D+M A + ++++TV+
Sbjct: 751 IYIGAIIPLGAAEKDGRLRAADELICIDGVPVKGKSHKQVLDLMTNAARNGHVLLTVR 808
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
G+FI RL G A G + V D+++E+N G + + +++ A S +++ ++P
Sbjct: 1026 GLFILRLAEDGPAIKDGRIHVGDQIVEINNEPTQGITHTRAIELIQAGGSKVLLLLRPG 1084
>sp|Q9Y6N9|USH1C_HUMAN Harmonin OS=Homo sapiens GN=USH1C PE=1 SV=3
Length = 552
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
PGIFIS + PG L+ GL + D+++EVNG+ + + +++ ++ S I V A
Sbjct: 234 PGIFISHVKPGSLSAEVGL-EIGDQIVEVNGVDFSNLDHKEAVNVLKSSRSLTISIVAAA 292
Query: 62 NQRANMSVPRRGSYSRTSQLSSDSHQSTQSIATTNNSEDDEQDEV 106
+ M+ R + +R +L + +A +N EQ E+
Sbjct: 293 GRELFMTDRERLAEARQRELQRQELLMQKRLAMESNKILQEQQEM 337
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62
G+FIS L+ GG A+S G L V DE++ +NG ++ + ++V + ++ + I V+
Sbjct: 111 GLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVIN-LIRTKKTVSIKVRHIG 168
Query: 63 QRANMSVPRRG-SYSRTSQLSSDSHQSTQSIATTNNSEDDEQDEVVDLTG 111
S P ++ Q S+S S+ + N E+ E+ + L G
Sbjct: 169 LIPVKSSPDEPLTWQYVDQFVSESGGVRGSLGSPGNRENKEKKVFISLVG 218
>sp|Q5T2T1|MPP7_HUMAN MAGUK p55 subfamily member 7 OS=Homo sapiens GN=MPP7 PE=1 SV=1
Length = 576
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62
I ++R++ GG A+ +GL+ V DE+ EVNGI V K +++ ++ + + + P +
Sbjct: 161 AIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFKIIPGS 220
Query: 63 QRANMS 68
+ S
Sbjct: 221 KEETPS 226
>sp|A6QQZ7|MPP7_BOVIN MAGUK p55 subfamily member 7 OS=Bos taurus GN=MPP7 PE=2 SV=1
Length = 576
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
I ++R++ GG A+ +GL+ V DE+ EVNGI V K +++ ++ + + + P+
Sbjct: 161 AIVVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFKIIPS 219
>sp|Q9ES64|USH1C_MOUSE Harmonin OS=Mus musculus GN=Ush1c PE=1 SV=1
Length = 910
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
PGIF+S + PG L+ GL D+++EVNGI + +++ ++ S I V A
Sbjct: 234 PGIFVSHVKPGSLSAEVGL-ETGDQIVEVNGIDFTNLDHKEAVNVLKSSRSLTISIVAGA 292
Query: 62 NQRANMSVPRRGSYSRTSQLSSDSHQSTQSIATTNNSEDDEQDEV 106
+ M+ R +R +L + +A +N EQ E+
Sbjct: 293 GRELFMTDRERLEEARQRELQRQELLMQKRLAMESNKILQEQQEM 337
Score = 37.7 bits (86), Expect = 0.068, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62
G+FIS L+ GG A+S G L V DE++ +NG ++ + ++V + ++ + I V+
Sbjct: 111 GLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVIN-LIRTKKTVSIKVRHIG 168
Query: 63 QRANMSVPRRG-SYSRTSQLSSDSHQSTQSIATTNNSEDDEQDEVVDLTG 111
S P + Q S+S + + N E+ + L G
Sbjct: 169 LIPVKSSPEESLKWQYVDQFVSESGGVRGGLGSPGNRTTKEKKVFISLVG 218
>sp|A8KBF6|MPP7_XENTR MAGUK p55 subfamily member 7 OS=Xenopus tropicalis GN=mpp7 PE=2
SV=1
Length = 576
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
I ++R++ GG A+ +GL+ V DE+ EVNGI V K +++ ++ + + + P+
Sbjct: 161 AIVVARIMRGGAADRSGLIHVGDELREVNGISVEDKKPEEIIHILAQSQGAITFKIIPS 219
>sp|Q92796|DLG3_HUMAN Disks large homolog 3 OS=Homo sapiens GN=DLG3 PE=1 SV=2
Length = 817
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVA 36
PGIFI++++PGG A G L VND VL VN + V+
Sbjct: 158 PGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVS 192
Score = 32.0 bits (71), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMM--VANSSNLIITVKP 60
GIF+S ++ GG A+ +G L D +L VNG+ + + +Q + S ++ +P
Sbjct: 408 GIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRP 467
Score = 30.8 bits (68), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 1 VPG---IFISRLVPGGLAESTGLLAVNDEVLEVN 31
+PG I+I++++ GG A+ G L + D +L VN
Sbjct: 249 IPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVN 282
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,798,020
Number of Sequences: 539616
Number of extensions: 3220142
Number of successful extensions: 8310
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 7915
Number of HSP's gapped (non-prelim): 454
length of query: 241
length of database: 191,569,459
effective HSP length: 114
effective length of query: 127
effective length of database: 130,053,235
effective search space: 16516760845
effective search space used: 16516760845
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)