Query psy16075
Match_columns 241
No_of_seqs 214 out of 1196
Neff 4.2
Searched_HMMs 29240
Date Fri Aug 16 20:15:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16075.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16075hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e17_A Tight junction protein 99.3 1.7E-11 5.8E-16 90.8 9.0 62 3-64 22-83 (88)
2 1r6j_A Syntenin 1; PDZ, membra 99.3 1.4E-11 4.9E-16 92.5 8.5 56 5-61 26-81 (82)
3 3o46_A Maguk P55 subfamily mem 99.2 2.7E-11 9.3E-16 89.6 9.1 62 2-63 28-89 (93)
4 2xkx_A Disks large homolog 4; 99.2 2.1E-11 7.1E-16 120.6 10.9 139 2-152 331-474 (721)
5 2ejy_A 55 kDa erythrocyte memb 99.2 2.8E-11 9.5E-16 92.7 7.9 62 2-63 36-97 (97)
6 1va8_A Maguk P55 subfamily mem 99.2 5.6E-11 1.9E-15 91.6 9.4 63 2-64 48-110 (113)
7 1nf3_C PAR-6B; semi-CRIB motif 99.2 6.1E-11 2.1E-15 93.3 9.8 62 3-64 66-127 (128)
8 3cbz_A Dishevelled-2; PDZ doma 99.2 6.2E-11 2.1E-15 90.8 9.2 62 2-63 33-97 (108)
9 4amh_A Disks large homolog 1; 99.2 9.2E-11 3.2E-15 89.6 9.8 61 3-63 33-93 (106)
10 2iwo_A Multiple PDZ domain pro 99.2 8.1E-11 2.8E-15 92.2 9.3 64 3-67 54-118 (120)
11 1kwa_A Hcask/LIN-2 protein; PD 99.2 6.6E-11 2.2E-15 87.6 8.3 60 3-63 26-86 (88)
12 2v90_A PDZ domain-containing p 99.2 1.1E-10 3.8E-15 86.6 9.3 64 3-67 31-94 (96)
13 2i1n_A Discs, large homolog 3; 99.2 1.2E-10 4E-15 87.3 9.3 65 2-66 34-98 (102)
14 1ujd_A KIAA0559 protein; PDZ d 99.2 1.1E-10 3.8E-15 90.4 9.1 62 3-64 50-111 (117)
15 3gge_A PDZ domain-containing p 99.2 9.1E-11 3.1E-15 91.2 8.5 59 3-61 29-89 (95)
16 1v62_A KIAA1719 protein; struc 99.2 1.3E-10 4.6E-15 90.1 9.1 62 3-64 43-104 (117)
17 2fne_A Multiple PDZ domain pro 99.2 1.7E-10 5.9E-15 90.0 9.6 62 3-64 54-115 (117)
18 3cyy_A Tight junction protein 99.1 1.8E-10 6E-15 84.3 9.0 66 3-68 24-89 (92)
19 2o2t_A Multiple PDZ domain pro 99.1 1.2E-10 4.2E-15 89.4 8.4 66 2-67 49-115 (117)
20 3tsz_A Tight junction protein 99.1 1E-10 3.5E-15 108.9 9.3 118 2-153 31-152 (391)
21 2pkt_A PDZ and LIM domain prot 99.1 2E-10 6.7E-15 84.5 8.9 62 3-65 28-89 (91)
22 2he4_A Na(+)/H(+) exchange reg 99.1 2.3E-10 7.7E-15 84.0 9.2 61 2-63 28-88 (90)
23 3b76_A E3 ubiquitin-protein li 99.1 1.4E-10 4.7E-15 91.1 8.4 60 2-61 53-112 (118)
24 1wi4_A Synip, syntaxin binding 99.1 1.5E-10 5E-15 89.2 8.4 62 2-63 41-106 (109)
25 3qe1_A Sorting nexin-27, G pro 99.1 2.8E-10 9.4E-15 86.0 9.7 62 2-64 43-104 (107)
26 2awx_A Synapse associated prot 99.1 2.4E-10 8.3E-15 86.4 9.3 65 3-67 34-98 (105)
27 2e7k_A Maguk P55 subfamily mem 99.1 2.2E-10 7.4E-15 85.3 8.9 60 2-62 29-88 (91)
28 2vwr_A Ligand of NUMB protein 99.1 2.4E-10 8.3E-15 84.6 9.1 62 2-63 29-90 (95)
29 2pa1_A PDZ and LIM domain prot 99.1 3E-10 1E-14 82.8 9.5 59 3-62 27-85 (87)
30 2jil_A GRIP1 protein, glutamat 99.1 2.2E-10 7.6E-15 84.9 8.8 63 3-65 33-95 (97)
31 2byg_A Channel associated prot 99.1 1.9E-10 6.6E-15 89.5 8.8 60 3-62 55-114 (117)
32 2g5m_B Neurabin-2; spinophilin 99.1 2.9E-10 9.8E-15 86.8 9.6 67 2-68 35-101 (113)
33 2eno_A Synaptojanin-2-binding 99.1 1.8E-10 6.3E-15 89.1 8.6 66 2-67 47-112 (120)
34 2kpk_A Membrane-associated gua 99.1 5E-10 1.7E-14 88.2 11.0 60 3-62 44-105 (129)
35 3shw_A Tight junction protein 99.1 8.4E-11 2.9E-15 112.7 7.8 116 2-151 23-142 (468)
36 2qg1_A Multiple PDZ domain pro 99.1 3.4E-10 1.2E-14 83.2 9.3 61 2-62 29-89 (92)
37 2vsp_A PDZ domain-containing p 99.1 1E-10 3.4E-15 86.2 6.4 62 2-64 27-88 (91)
38 2fcf_A Multiple PDZ domain pro 99.1 3.8E-10 1.3E-14 84.5 9.7 62 2-63 39-100 (103)
39 2opg_A Multiple PDZ domain pro 99.1 4E-10 1.4E-14 83.6 9.7 64 2-65 30-93 (98)
40 1um1_A KIAA1849 protein, RSGI 99.1 2.1E-10 7.2E-15 87.2 8.3 68 2-69 36-103 (110)
41 1n7e_A AMPA receptor interacti 99.1 3.8E-10 1.3E-14 84.0 9.4 63 2-64 30-92 (97)
42 1g9o_A NHE-RF; PDZ domain, com 99.1 4.7E-10 1.6E-14 82.2 9.7 59 2-61 27-85 (91)
43 2fe5_A Presynaptic protein SAP 99.1 4.3E-10 1.5E-14 82.7 9.4 60 3-62 34-93 (94)
44 2q3g_A PDZ and LIM domain prot 99.1 2.6E-10 9E-15 83.5 8.2 60 3-63 28-87 (89)
45 3axa_A Afadin, nectin-3, prote 99.1 4.3E-10 1.5E-14 85.0 9.5 63 2-64 38-100 (106)
46 1d5g_A Human phosphatase HPTP1 99.1 4.2E-10 1.4E-14 83.2 9.3 61 2-62 33-93 (96)
47 3khf_A Microtubule-associated 99.1 4.3E-10 1.5E-14 83.8 9.3 60 3-63 35-94 (99)
48 2db5_A INAD-like protein; PDZ 99.1 2.2E-10 7.4E-15 89.7 8.0 60 3-62 55-115 (128)
49 1rgw_A ZAsp protein; PDZ, cyph 99.1 2.8E-10 9.7E-15 82.2 8.1 59 3-62 26-84 (85)
50 2ego_A General receptor for ph 99.1 4.5E-10 1.6E-14 83.6 9.3 58 3-61 38-95 (96)
51 1wg6_A Hypothetical protein (r 99.1 1.2E-10 4.2E-15 91.9 6.5 62 3-64 56-124 (127)
52 3r68_A Na(+)/H(+) exchange reg 99.1 3.4E-10 1.2E-14 83.4 8.4 60 3-63 30-89 (95)
53 1wf7_A Enigma homologue protei 99.1 3.1E-10 1E-14 85.6 8.2 65 3-68 30-94 (103)
54 1ihj_A INAD; intermolecular di 99.1 4.6E-10 1.6E-14 83.3 9.0 60 3-62 38-97 (98)
55 2d92_A INAD-like protein; PDZ 99.1 2.7E-10 9.2E-15 86.9 8.0 60 2-61 44-104 (108)
56 1qau_A Neuronal nitric oxide s 99.1 5.7E-10 1.9E-14 84.9 9.7 68 2-69 26-94 (112)
57 2uzc_A Human pdlim5, PDZ and L 99.1 5.9E-10 2E-14 81.2 9.4 59 3-62 28-86 (88)
58 2f5y_A Regulator of G-protein 99.1 5.6E-10 1.9E-14 82.4 8.9 60 3-63 25-84 (91)
59 3egg_C Spinophilin; PP1, serin 99.1 3.9E-10 1.3E-14 94.2 9.0 59 2-60 111-169 (170)
60 2dmz_A INAD-like protein; PDZ 99.1 5.6E-10 1.9E-14 87.2 9.3 65 2-66 46-110 (129)
61 1wf8_A Neurabin-I; PDZ domain, 99.1 3.8E-10 1.3E-14 85.6 8.1 61 3-63 41-101 (107)
62 1vb7_A PDZ and LIM domain 2; P 99.1 3.2E-10 1.1E-14 84.2 7.5 62 3-65 31-92 (94)
63 2daz_A INAD-like protein; PDZ 99.1 4.3E-10 1.5E-14 87.7 8.6 63 2-64 51-113 (124)
64 2dc2_A GOPC, golgi associated 99.1 4.7E-10 1.6E-14 85.0 8.5 60 3-63 36-96 (103)
65 1uew_A Membrane associated gua 99.1 3.3E-10 1.1E-14 87.0 7.7 63 3-66 44-107 (114)
66 2jik_A Synaptojanin-2 binding 99.1 6.3E-10 2.1E-14 83.2 9.0 62 2-63 37-98 (101)
67 3l4f_D SH3 and multiple ankyri 99.1 4.1E-10 1.4E-14 89.7 8.5 60 3-63 66-125 (132)
68 2la8_A Inactivation-NO-after-p 99.1 3.5E-10 1.2E-14 87.0 7.7 60 2-61 25-84 (106)
69 2qkv_A Inactivation-NO-after-p 99.1 5E-10 1.7E-14 83.7 8.4 60 2-61 31-90 (96)
70 2i04_A Membrane-associated gua 99.1 7.5E-10 2.6E-14 80.2 9.0 58 3-60 26-85 (85)
71 2jre_A C60-1 PDZ domain peptid 99.1 4.5E-10 1.5E-14 84.9 8.1 62 3-64 45-106 (108)
72 2rcz_A Tight junction protein 99.1 8.2E-10 2.8E-14 78.4 8.9 59 3-61 22-80 (81)
73 4e34_A Golgi-associated PDZ an 99.1 6.6E-10 2.3E-14 80.8 8.6 56 3-59 29-85 (87)
74 1uhp_A Hypothetical protein KI 99.1 8.1E-10 2.8E-14 83.8 9.4 59 2-61 41-100 (107)
75 2iwq_A Multiple PDZ domain pro 99.1 8.7E-10 3E-14 86.8 9.9 62 2-63 59-120 (123)
76 1v5l_A PDZ and LIM domain 3; a 99.1 2.2E-10 7.5E-15 86.5 6.2 64 3-67 30-93 (103)
77 1x6d_A Interleukin-16; PDZ dom 99.1 5.1E-10 1.8E-14 86.3 8.4 66 2-67 42-108 (119)
78 2w4f_A Protein LAP4; structura 99.1 1E-09 3.5E-14 81.1 9.7 62 2-64 34-95 (97)
79 2yt7_A Amyloid beta A4 precurs 99.1 4.8E-10 1.6E-14 84.6 8.0 60 2-61 37-98 (101)
80 2dlu_A INAD-like protein; PDZ 99.0 4.3E-10 1.5E-14 85.6 7.7 63 2-64 38-100 (111)
81 3ngh_A PDZ domain-containing p 99.0 2.5E-10 8.6E-15 86.1 6.3 65 2-67 26-90 (106)
82 1qav_A Alpha-1 syntrophin (res 99.0 7.8E-10 2.7E-14 81.1 8.7 57 3-60 31-88 (90)
83 2koj_A Partitioning defective 99.0 9.3E-10 3.2E-14 83.6 9.4 63 2-64 39-103 (111)
84 1uf1_A KIAA1526 protein; PDZ d 99.0 1.6E-09 5.6E-14 84.6 11.0 64 3-68 47-110 (128)
85 3hpk_A Protein interacting wit 99.0 7.8E-10 2.7E-14 86.1 9.1 59 2-60 45-103 (125)
86 1q7x_A PDZ2B domain of PTP-BAS 99.0 4.3E-10 1.5E-14 85.2 7.3 63 2-64 42-104 (108)
87 1ufx_A KIAA1526 protein; PDZ d 99.0 3.9E-10 1.3E-14 86.2 7.1 61 2-62 32-97 (103)
88 1x5q_A LAP4 protein; PDZ domai 99.0 1.2E-09 4E-14 83.1 9.6 63 2-65 46-108 (110)
89 1y7n_A Amyloid beta A4 precurs 99.0 7.9E-10 2.7E-14 82.9 8.5 56 5-61 34-89 (90)
90 2dkr_A LIN-7 homolog B; LIN-7B 99.0 8.5E-10 2.9E-14 81.0 8.5 61 2-62 30-90 (93)
91 1uep_A Membrane associated gua 99.0 3.4E-10 1.1E-14 85.5 6.4 62 2-63 34-97 (103)
92 2r4h_A Membrane-associated gua 99.0 1E-09 3.5E-14 84.3 9.2 62 2-63 49-110 (112)
93 1q3o_A Shank1; PDZ, GKAP, pept 99.0 1E-09 3.5E-14 83.4 9.2 58 3-61 46-103 (109)
94 1m5z_A GRIP, AMPA receptor int 99.0 1.2E-09 4.3E-14 80.0 9.3 59 2-61 32-90 (91)
95 1wha_A KIAA0147 protein, scrib 99.0 5.3E-10 1.8E-14 84.5 7.4 61 2-62 38-98 (105)
96 3i4w_A Disks large homolog 4; 99.0 8.4E-10 2.9E-14 82.5 8.4 62 2-63 35-96 (104)
97 1ueq_A Membrane associated gua 99.0 1.9E-09 6.4E-14 84.1 10.6 60 3-62 45-106 (123)
98 2q9v_A Membrane-associated gua 99.0 5.6E-10 1.9E-14 81.7 7.1 59 3-61 28-88 (90)
99 1wi2_A Riken cDNA 2700099C19; 99.0 1.2E-09 4.2E-14 82.6 9.2 60 2-63 41-100 (104)
100 1b8q_A Protein (neuronal nitri 99.0 7.3E-10 2.5E-14 86.3 8.2 69 2-70 33-102 (127)
101 2djt_A Unnamed protein product 99.0 9.6E-10 3.3E-14 82.6 8.6 62 2-63 38-99 (104)
102 1wfg_A Regulating synaptic mem 99.0 8.4E-10 2.9E-14 87.6 8.6 59 3-61 66-126 (131)
103 2dm8_A INAD-like protein; PDZ 99.0 9.5E-10 3.3E-14 84.1 8.3 65 2-66 43-107 (116)
104 2eeh_A PDZ domain-containing p 99.0 1.5E-09 5.3E-14 81.3 9.3 60 2-63 36-95 (100)
105 3nfk_A Tyrosine-protein phosph 99.0 1E-09 3.5E-14 82.8 8.2 58 3-60 44-106 (107)
106 2d90_A PDZ domain containing p 99.0 8.1E-10 2.8E-14 82.9 7.6 62 2-64 30-91 (102)
107 2eeg_A PDZ and LIM domain prot 99.0 1.1E-09 3.7E-14 81.3 8.1 60 3-63 33-92 (94)
108 2iwn_A Multiple PDZ domain pro 99.0 1.3E-09 4.3E-14 80.0 8.3 62 2-63 33-94 (97)
109 2eei_A PDZ domain-containing p 99.0 8.5E-10 2.9E-14 83.1 7.5 64 2-66 32-95 (106)
110 3gsl_A Disks large homolog 4; 99.0 9.6E-10 3.3E-14 89.0 8.4 64 2-65 130-193 (196)
111 1wfv_A Membrane associated gua 99.0 5.3E-10 1.8E-14 83.5 6.3 62 3-64 37-98 (103)
112 2edz_A PDZ domain-containing p 99.0 2.6E-10 9.1E-15 87.5 4.8 66 2-68 38-103 (114)
113 2vz5_A TAX1-binding protein 3; 99.0 1.3E-09 4.6E-14 87.5 9.1 66 2-68 64-130 (139)
114 3sfj_A TAX1-binding protein 3; 99.0 1.6E-09 5.6E-14 81.1 8.9 58 2-60 45-103 (104)
115 2ehr_A INAD-like protein; PDZ 99.0 9.3E-10 3.2E-14 84.6 7.5 62 2-63 50-111 (117)
116 1v5q_A GRIP1 homolog, glutamat 99.0 1.4E-09 4.7E-14 84.7 8.5 64 3-66 46-111 (122)
117 1i16_A Interleukin 16, LCF; cy 99.0 3.4E-10 1.2E-14 89.5 5.1 60 3-62 58-118 (130)
118 2vsv_A Rhophilin-2; scaffold p 99.0 1.9E-09 6.5E-14 84.0 9.3 60 3-63 45-105 (109)
119 1uit_A Human discs large 5 pro 99.0 1.7E-09 5.9E-14 83.1 8.9 65 2-67 42-106 (117)
120 2kv8_A RGS12, regulator of G-p 99.0 5.6E-10 1.9E-14 80.7 5.8 58 3-61 24-81 (83)
121 2jxo_A Ezrin-radixin-moesin-bi 99.0 8.6E-10 2.9E-14 82.0 6.8 61 2-63 33-94 (98)
122 2kom_A Partitioning defective 99.0 2.2E-09 7.6E-14 83.8 9.4 61 2-62 58-120 (121)
123 1whd_A RGS3, regulator of G-pr 99.0 9E-10 3.1E-14 82.9 6.8 59 3-62 37-95 (100)
124 2cs5_A Tyrosine-protein phosph 99.0 9.2E-10 3.2E-14 84.9 6.4 62 3-65 42-109 (119)
125 2eaq_A LIM domain only protein 99.0 1.6E-09 5.6E-14 79.1 7.4 60 2-62 28-89 (90)
126 2csj_A TJP2 protein; PDZ domai 98.9 1.1E-09 3.8E-14 84.4 6.5 61 2-64 46-106 (117)
127 2dls_A PDZ-rhogef, RHO guanine 98.9 2.3E-09 8E-14 79.5 7.9 60 2-63 29-88 (93)
128 2gzv_A PRKCA-binding protein; 98.9 4.6E-09 1.6E-13 81.5 9.7 60 2-61 50-109 (114)
129 2kjd_A Sodium/hydrogen exchang 98.9 2.4E-09 8.3E-14 83.1 8.1 69 2-71 33-104 (128)
130 1mfg_A ERB-B2 interacting prot 98.9 3E-09 1E-13 78.7 8.2 58 2-61 35-92 (95)
131 2z17_A Pleckstrin homology SEC 98.9 1.6E-09 5.6E-14 81.6 6.7 56 2-58 48-103 (104)
132 2edp_A Fragment, shroom family 98.9 2E-09 6.9E-14 81.0 7.1 60 3-64 36-96 (100)
133 2yuy_A RHO GTPase activating p 98.9 5.7E-10 1.9E-14 87.4 4.2 61 2-63 61-121 (126)
134 2qbw_A PDZ-fibronectin fusion 98.9 3.1E-09 1.1E-13 87.2 8.7 64 2-67 24-90 (195)
135 1v6b_A Harmonin isoform A1; st 98.9 2.3E-09 7.9E-14 83.3 7.4 58 3-61 44-106 (118)
136 1wif_A RSGI RUH-020, riken cDN 98.9 1.7E-09 5.9E-14 86.7 6.8 60 2-61 49-110 (126)
137 3tsv_A Tight junction protein 98.9 3.4E-09 1.2E-13 83.5 8.0 63 2-65 51-115 (124)
138 1uju_A Scribble; PDZ domain, c 98.9 7E-10 2.4E-14 84.6 3.8 61 2-62 44-104 (111)
139 3r0h_A INAD, inactivation-NO-a 98.9 3.4E-09 1.2E-13 87.5 8.2 60 2-61 136-195 (206)
140 3k1r_A Harmonin; protein-prote 98.9 3.9E-09 1.3E-13 88.1 8.3 59 3-63 111-169 (192)
141 1z87_A Alpha-1-syntrophin; pro 98.9 7.7E-09 2.6E-13 92.4 10.6 62 3-65 104-166 (263)
142 2yub_A LIMK-2, LIM domain kina 98.9 3.7E-09 1.3E-13 83.0 7.6 65 2-67 44-110 (118)
143 1n7t_A 99-MER peptide of densi 98.9 3.2E-09 1.1E-13 79.8 6.5 58 2-61 43-100 (103)
144 1tp5_A Presynaptic density pro 98.9 8.6E-09 2.9E-13 79.2 9.0 62 2-63 38-99 (119)
145 2pzd_A Serine protease HTRA2; 98.9 1.1E-08 3.7E-13 78.0 9.4 66 2-71 35-100 (113)
146 3kzd_A TIAM-1, T-lymphoma inva 98.9 4.7E-09 1.6E-13 80.8 7.3 55 2-59 35-89 (94)
147 1wh1_A KIAA1095 protein; PDZ d 98.9 6.2E-09 2.1E-13 81.3 7.8 63 2-67 48-112 (124)
148 1x5n_A Harmonin; PDZ domain, u 98.9 6.6E-09 2.3E-13 79.3 7.7 65 2-68 41-106 (114)
149 3r0h_A INAD, inactivation-NO-a 98.8 1.1E-08 3.9E-13 84.3 9.5 63 2-64 45-110 (206)
150 1uez_A KIAA1526 protein; PDZ d 98.8 5E-09 1.7E-13 78.4 6.6 60 2-63 35-94 (101)
151 2h2b_A Tight junction protein 98.8 1.4E-08 4.7E-13 76.6 8.3 60 3-64 40-99 (107)
152 3qik_A Phosphatidylinositol 3, 98.8 1.5E-08 5.2E-13 79.6 8.7 57 3-60 40-99 (101)
153 2d8i_A T-cell lymphoma invasio 98.8 7.5E-09 2.6E-13 81.1 7.0 56 3-61 45-100 (114)
154 3gsl_A Disks large homolog 4; 98.8 1.5E-08 5.1E-13 82.0 8.9 61 2-62 35-95 (196)
155 3bpu_A Membrane-associated gua 98.8 1.1E-08 3.7E-13 74.6 7.3 58 2-62 27-86 (88)
156 1um7_A Synapse-associated prot 98.8 4.1E-09 1.4E-13 79.8 5.2 62 2-63 39-100 (113)
157 2edv_A FERM and PDZ domain-con 98.8 3.2E-09 1.1E-13 79.5 4.5 59 2-62 31-89 (96)
158 1vae_A Rhophilin 2, rhophilin, 98.8 6.5E-09 2.2E-13 80.7 6.3 58 3-61 37-95 (111)
159 3i18_A LMO2051 protein; alpha- 98.8 1.7E-08 5.9E-13 76.1 8.1 63 2-68 7-71 (100)
160 2krg_A Na(+)/H(+) exchange reg 98.8 6.7E-09 2.3E-13 89.9 6.1 63 2-65 33-96 (216)
161 2kjp_A Uncharacterized protein 98.8 2.9E-09 1E-13 80.0 2.9 66 2-71 1-68 (91)
162 1ujv_A Membrane associated gua 98.8 3.3E-08 1.1E-12 74.2 8.7 59 3-64 33-93 (96)
163 2p3w_A Probable serine proteas 98.7 3.5E-08 1.2E-12 75.2 8.6 65 2-70 35-99 (112)
164 2qt5_A Glutamate receptor-inte 98.7 2.5E-08 8.5E-13 82.5 8.3 62 3-64 136-197 (200)
165 1w9e_A Syntenin 1; cell adhesi 98.7 4.6E-08 1.6E-12 79.2 9.6 68 2-70 27-95 (166)
166 2kl1_A YLBL protein; structure 98.7 1.3E-08 4.6E-13 76.2 5.8 65 2-70 5-71 (94)
167 2l97_A HTRA, putative serine p 98.7 3.5E-08 1.2E-12 78.5 8.4 64 2-69 57-122 (134)
168 2zpm_A Regulator of sigma E pr 98.7 2.6E-08 8.9E-13 72.8 7.1 64 4-70 6-70 (91)
169 3soe_A Membrane-associated gua 98.7 4.7E-08 1.6E-12 77.6 8.5 62 3-67 35-98 (113)
170 1p1d_A PDZ45, glutamate recept 98.7 3.9E-08 1.3E-12 81.4 8.4 64 2-65 36-101 (196)
171 3id1_A Regulator of sigma E pr 98.7 6.1E-08 2.1E-12 72.9 8.5 57 3-62 3-61 (95)
172 2i6v_A General secretion pathw 98.7 3.2E-08 1.1E-12 72.8 6.8 63 3-68 20-84 (87)
173 2qt5_A Glutamate receptor-inte 98.7 4.3E-08 1.5E-12 81.0 8.3 59 3-62 34-93 (200)
174 2lob_A Golgi-associated PDZ an 98.1 1.9E-09 6.4E-14 83.8 0.0 56 3-59 54-110 (112)
175 1p1d_A PDZ45, glutamate recept 98.7 7E-08 2.4E-12 79.9 8.4 61 2-62 135-195 (196)
176 2i4s_A General secretion pathw 98.6 1.2E-07 4.2E-12 72.0 6.9 63 3-68 38-102 (105)
177 3suz_A Amyloid beta A4 precurs 98.5 4.5E-08 1.5E-12 90.5 4.9 68 2-69 232-301 (388)
178 3stj_A Protease DEGQ; serine p 98.5 2.3E-07 8E-12 84.5 8.5 65 2-69 263-329 (345)
179 2xkx_A Disks large homolog 4; 98.5 2E-07 7E-12 92.2 8.3 61 2-62 89-149 (721)
180 1fc6_A Photosystem II D1 prote 98.5 3.6E-07 1.2E-11 83.9 8.9 70 2-72 99-172 (388)
181 1te0_A Protease DEGS; two doma 98.5 3E-07 1E-11 81.9 8.0 65 2-69 244-310 (318)
182 1lcy_A HTRA2 serine protease; 98.5 4.5E-07 1.5E-11 81.4 8.9 65 2-70 256-320 (325)
183 4a8c_A Periplasmic PH-dependen 98.4 5E-07 1.7E-11 84.5 8.7 63 3-68 364-426 (436)
184 2hga_A Conserved protein MTH13 98.4 8.3E-07 2.8E-11 70.5 8.1 61 2-68 25-87 (125)
185 1y8t_A Hypothetical protein RV 98.4 7.3E-07 2.5E-11 79.4 8.4 64 2-68 242-308 (324)
186 3pv2_A DEGQ; trypsin fold, PDZ 98.4 7.6E-07 2.6E-11 83.9 8.2 63 3-68 387-449 (451)
187 3qo6_A Protease DO-like 1, chl 98.4 5.2E-07 1.8E-11 81.7 6.7 65 2-69 251-328 (348)
188 3rle_A Golgi reassembly-stacki 98.3 1.9E-06 6.6E-11 72.7 8.5 58 2-62 16-76 (209)
189 3pv2_A DEGQ; trypsin fold, PDZ 98.3 1.7E-06 5.7E-11 81.6 9.0 64 2-68 282-347 (451)
190 4a8c_A Periplasmic PH-dependen 98.3 1.5E-06 5.2E-11 81.2 8.6 65 2-69 263-329 (436)
191 3rle_A Golgi reassembly-stacki 98.2 1.6E-06 5.4E-11 73.2 6.3 57 2-62 112-170 (209)
192 3suz_A Amyloid beta A4 precurs 98.2 2E-07 6.8E-12 86.2 0.0 61 4-65 317-377 (388)
193 3num_A Serine protease HTRA1; 98.2 2.2E-07 7.4E-12 83.4 0.0 64 2-69 254-317 (332)
194 1w9e_A Syntenin 1; cell adhesi 98.1 9.8E-06 3.4E-10 65.4 8.7 55 5-60 110-164 (166)
195 4fgm_A Aminopeptidase N family 98.1 4.4E-06 1.5E-10 81.7 6.7 64 3-70 497-562 (597)
196 3k50_A Putative S41 protease; 97.9 6.6E-06 2.2E-10 77.2 4.9 56 4-63 92-147 (403)
197 1ky9_A Protease DO, DEGP, HTRA 97.9 1.3E-06 4.3E-11 82.4 0.0 64 2-68 383-446 (448)
198 1ky9_A Protease DO, DEGP, HTRA 97.9 3.6E-06 1.2E-10 79.3 2.2 66 2-70 286-353 (448)
199 1k32_A Tricorn protease; prote 97.6 8.2E-05 2.8E-09 74.1 7.6 65 3-71 749-825 (1045)
200 4fln_A Protease DO-like 2, chl 97.3 0.00028 9.7E-09 68.7 6.5 66 2-69 277-352 (539)
201 4fln_A Protease DO-like 2, chl 96.7 0.0039 1.3E-07 60.8 8.3 54 3-59 416-470 (539)
202 3tvt_A Disks large 1 tumor sup 90.2 0.079 2.7E-06 47.5 1.1 45 104-150 6-50 (292)
203 4dey_A Voltage-dependent L-typ 85.7 0.31 1E-05 45.2 2.0 45 105-150 40-85 (337)
204 1wmh_B Partitioning defective- 82.7 0.067 2.3E-06 40.9 -3.2 32 115-162 55-86 (86)
205 2csi_A RIM-BP2, RIM binding pr 58.9 3.4 0.00012 28.9 1.2 47 106-152 10-57 (76)
206 1kjw_A Postsynaptic density pr 53.4 3.7 0.00013 36.3 0.8 45 106-152 4-48 (295)
207 2ege_A Uncharacterized protein 48.8 6.9 0.00024 27.3 1.5 48 105-152 9-57 (75)
208 1wie_A RIM binding protein 2; 47.8 12 0.00042 27.3 2.8 46 104-150 18-64 (96)
209 2csq_A RIM-BP2, RIM binding pr 47.0 8.4 0.00029 28.2 1.8 49 104-152 18-68 (97)
210 1g2b_A Spectrin alpha chain; c 36.5 20 0.00068 23.8 2.2 28 123-151 35-62 (62)
211 1x69_A Cortactin isoform A; SH 35.3 29 0.001 24.1 3.0 29 123-152 31-59 (79)
212 2odb_B Serine/threonine-protei 31.8 13 0.00043 23.3 0.5 15 194-208 1-15 (35)
213 2d8h_A SH3YL1 protein; SH3 dom 29.7 30 0.001 24.0 2.3 30 123-152 31-61 (80)
214 2eyx_A V-CRK sarcoma virus CT1 27.3 38 0.0013 22.8 2.4 29 123-152 22-50 (67)
215 2ebp_A SAM and SH3 domain-cont 26.8 34 0.0012 23.6 2.1 29 123-152 25-53 (73)
216 2ov2_I Serine/threonine-protei 26.7 17 0.00059 22.7 0.5 15 194-208 1-15 (35)
217 2dbk_A CRK-like protein; struc 26.2 32 0.0011 24.5 2.0 29 123-152 32-60 (88)
218 1x2q_A Signal transducing adap 24.6 47 0.0016 23.5 2.6 29 123-152 31-59 (88)
219 2kp6_A Uncharacterized protein 24.1 30 0.001 26.1 1.5 22 207-228 2-23 (82)
220 2qme_I CRIB domain of the seri 23.7 21 0.00072 22.4 0.5 15 194-208 1-15 (36)
221 1k4u_S Phagocyte NADPH oxidase 23.6 58 0.002 21.3 2.8 29 123-152 19-47 (62)
222 2ew3_A SH3-containing GRB2-lik 23.4 50 0.0017 22.5 2.4 29 123-152 17-45 (68)
223 2i0n_A Class VII unconventiona 22.6 51 0.0018 22.9 2.4 29 123-152 24-53 (80)
224 2jxb_A T-cell surface glycopro 22.6 1.1E+02 0.0037 21.6 4.2 25 123-149 45-69 (86)
225 3dor_A Protein CT_858, CPAF; m 22.4 67 0.0023 31.8 4.0 17 19-36 109-125 (583)
226 1cee_B Wiskott-aldrich syndrom 21.9 32 0.0011 23.8 1.2 37 192-228 6-50 (59)
227 2yuo_A CIP85, RUN and TBC1 dom 21.2 53 0.0018 22.6 2.2 29 123-152 21-49 (78)
228 2bzy_A CRK-like protein, CRKL 21.2 47 0.0016 22.2 1.9 29 123-152 17-45 (67)
229 1tg0_A BBC1 protein, myosin ta 21.0 46 0.0016 22.3 1.8 29 123-152 21-49 (68)
230 1ri9_A FYN-binding protein; SH 20.9 40 0.0014 26.3 1.7 53 98-151 18-82 (102)
231 2ed1_A 130 kDa phosphatidylino 20.8 32 0.0011 23.7 1.0 29 123-152 24-52 (76)
No 1
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.27 E-value=1.7e-11 Score=90.81 Aligned_cols=62 Identities=24% Similarity=0.396 Sum_probs=55.7
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
|++|.+|.++|||+++|.|++||+|++|||+++.++++++++++|+...+.+.|++.+....
T Consensus 22 gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~~~~~~ 83 (88)
T 3e17_A 22 QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRDLEH 83 (88)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEECCC---
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEeCCCcc
Confidence 68999999999999999559999999999999999999999999999988999999886543
No 2
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.27 E-value=1.4e-11 Score=92.48 Aligned_cols=56 Identities=29% Similarity=0.440 Sum_probs=51.9
Q ss_pred EEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 5 FISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 5 fIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
.|.++.+++||+++|+ ++||+|++|||+++.+++|++++++|+..+..|+|+|.|.
T Consensus 26 ~I~~v~~gspA~~aGl-~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~v~p~ 81 (82)
T 1r6j_A 26 KITSIVKDSSAARNGL-LTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA 81 (82)
T ss_dssp EEEEECTTSHHHHHTC-CSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEC
T ss_pred EEEEecCCCHHHHcCC-CCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEeC
Confidence 3789999999999997 8999999999999999999999999997777899999874
No 3
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.25 E-value=2.7e-11 Score=89.61 Aligned_cols=62 Identities=29% Similarity=0.599 Sum_probs=55.9
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.+++|.+|.+++||+++|.|++||+|++|||+++.++++++++++|+...+.+.|+|.+..+
T Consensus 28 ~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~~ 89 (93)
T 3o46_A 28 GAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFKIIPGSK 89 (93)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEEEEEECC--
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCC
Confidence 47999999999999999955999999999999999999999999999888889999998654
No 4
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.25 E-value=2.1e-11 Score=120.60 Aligned_cols=139 Identities=19% Similarity=0.178 Sum_probs=97.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccc-cc----cccCCCCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRAN-MS----VPRRGSYS 76 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~-~~----~~R~~~~~ 76 (241)
.|++|..|.++|+|+++|.|++||+|++|||++|.++++++++++|+..++.|.|+|.+...... +. ..|..-++
T Consensus 331 ~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~v~L~v~r~~~~~~~~~~~~~~~~~~~~~ 410 (721)
T 2xkx_A 331 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEEYSRFEAKIHDLREQLMN 410 (721)
T ss_pred CCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEEEEeCchhhhhhhhhhhhhhhhccc
Confidence 47999999999999999955999999999999999999999999999877788998886543211 11 01110010
Q ss_pred CCCCCCCCCCCCCcCcccCCCCCCcchhhhhhcccccceeecccCCCCcccceeeeEEEEEeecccccchhccccc
Q psy16075 77 RTSQLSSDSHQSTQSIATTNNSEDDEQDEVVDLTGITLEICRIEPSTNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 77 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
. ..++++ .+. . ....+.-.|+++..+....++-+| .....|.+++|+++....+ ..||++...+
T Consensus 411 ~--s~~~g~-~~~--~-----~~~~~~~~vrAl~dy~~~~d~~~p-~~~LsF~~GDil~v~~~~~-~~WW~a~~~~ 474 (721)
T 2xkx_A 411 S--SLGSGT-ASL--R-----SNPKRGFYIRALFDYDKTKDCGFL-SQALSFRFGDVLHVIDAGD-EEWWQARRVH 474 (721)
T ss_pred c--cccCCc-ccc--c-----cccccceeEEEeeccCcCCCCCCc-cccccccCCCEEEEeecCC-CCeEEEEECC
Confidence 0 011111 000 0 011234557788887776666667 4568999999999999877 7999998763
No 5
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.22 E-value=2.8e-11 Score=92.74 Aligned_cols=62 Identities=32% Similarity=0.541 Sum_probs=56.0
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|.+|.+++||+++|+|++||+|++|||+++.+++++++.++|+...+.+.|+|.+..|
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L~V~~~~~ 97 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISLKVIPNQQ 97 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEEEEECCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 37999999999999999955999999999999999889999999999877679999987643
No 6
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.21 E-value=5.6e-11 Score=91.56 Aligned_cols=63 Identities=40% Similarity=0.663 Sum_probs=58.2
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
.|++|..|.+++||+++|+|++||+|++|||++|.+++++++..+|+...+.+.|+|.+.++.
T Consensus 48 ~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~~ 110 (113)
T 1va8_A 48 DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSSGP 110 (113)
T ss_dssp SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEEEEECCCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCcc
Confidence 478999999999999999889999999999999999999999999988877899999987764
No 7
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.21 E-value=6.1e-11 Score=93.34 Aligned_cols=62 Identities=90% Similarity=1.246 Sum_probs=57.3
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
|++|..|.++|||+++|+|++||+|++|||+++.++++++++.+|+..+..+.|+|.+.+++
T Consensus 66 gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~~ 127 (128)
T 1nf3_C 66 GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQR 127 (128)
T ss_dssp EEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHHTTTSEEEEEECCCCC
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCcC
Confidence 79999999999999999659999999999999999999999999998878899999987654
No 8
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.20 E-value=6.2e-11 Score=90.82 Aligned_cols=62 Identities=23% Similarity=0.405 Sum_probs=55.5
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC---CCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN---SSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss---sg~VtLtV~p~~q 63 (241)
.|++|.+|.+++||+++|.|++||+|++|||+++.+++|++++++|+.. .+.|.|+|.+..+
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 33 GGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp CEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECCCC
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeCCC
Confidence 4799999999999999995599999999999999999999999999876 3479999987654
No 9
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.19 E-value=9.2e-11 Score=89.57 Aligned_cols=61 Identities=20% Similarity=0.444 Sum_probs=56.3
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
|++|..|.+++||+++|.|++||+|++|||+++.++++++++.+++..++.+.|+|.+.++
T Consensus 33 gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 93 (106)
T 4amh_A 33 SIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKVAKPGS 93 (106)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEEECCSS
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCC
Confidence 8999999999999999944999999999999999999999999999877789999998764
No 10
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.19 E-value=8.1e-11 Score=92.22 Aligned_cols=64 Identities=23% Similarity=0.403 Sum_probs=58.5
Q ss_pred cEEEEEEcCCCHHhhh-CCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccccc
Q psy16075 3 GIFISRLVPGGLAEST-GLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANM 67 (241)
Q Consensus 3 GIfIs~VvpGSpAerA-GLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~ 67 (241)
|++|..|.+++||+++ || ++||+|++|||+++.++++.+++.+++..++.|.|+|.+.++..++
T Consensus 54 ~~~V~~V~~~spA~~aggL-~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g~~~~~ 118 (120)
T 2iwo_A 54 PIFIAMMHPTGVAAQTQKL-RVGDRIVTICGTSTEGMTHTQAVNLLKNASGSIEMQVVAGGDVSET 118 (120)
T ss_dssp EEEEEEECTTSHHHHHTCC-CTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEEEECCTTSSSC
T ss_pred CEEEEEECCCCHHHHhCCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCcccee
Confidence 6899999999999999 65 9999999999999999999999999998888899999988776554
No 11
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=6.6e-11 Score=87.63 Aligned_cols=60 Identities=27% Similarity=0.530 Sum_probs=54.5
Q ss_pred cEEEEEEcCCCHHhh-hCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 3 GIFISRLVPGGLAES-TGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 3 GIfIs~VvpGSpAer-AGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
+++|.+|.+++||++ +|+ ++||+|++|||+++.++++++++++|+...+.+.|+|.+.++
T Consensus 26 ~~~I~~V~~gspA~~~agL-~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 86 (88)
T 1kwa_A 26 HCIVARIMHGGMIHRQGTL-HVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYR 86 (88)
T ss_dssp GEEEEEECTTSHHHHHTCC-CTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEEEEECCCC
T ss_pred CEEEEEECCCCHHHHcCCC-CCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEEECCcC
Confidence 689999999999999 565 999999999999999999999999999887788888887654
No 12
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.18 E-value=1.1e-10 Score=86.56 Aligned_cols=64 Identities=22% Similarity=0.339 Sum_probs=57.8
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANM 67 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~ 67 (241)
|++|..|.+++||+++|+ ++||+|++|||+++.+++++++.++++..+..+.|+|.+.++...+
T Consensus 31 g~~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~~~~ 94 (96)
T 2v90_A 31 GQFLWEVDPGLPAKKAGM-QAGDRLVAVAGESVEGLGHEETVSRIQGQGSCVSLTVVDPEADRET 94 (96)
T ss_dssp EEEEEEECTTSHHHHTTC-CTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEECCCTTSCC
T ss_pred CeEEEEECCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEECCCCcccc
Confidence 799999999999999996 9999999999999998889999999987756799999988766544
No 13
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.17 E-value=1.2e-10 Score=87.34 Aligned_cols=65 Identities=31% Similarity=0.520 Sum_probs=57.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRAN 66 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~ 66 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..+..+.|+|.+.++..+
T Consensus 34 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~ 98 (102)
T 2i1n_A 34 PGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQPPPE 98 (102)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEEEEEEECCCCS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCCCC
Confidence 48999999999999999944999999999999999999999999998877789999988765443
No 14
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=1.1e-10 Score=90.39 Aligned_cols=62 Identities=34% Similarity=0.534 Sum_probs=56.2
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
|++|..|.+++||+++|.|++||+|++|||+++.++++++++.+|+.....+.|+|.+..+.
T Consensus 50 g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 50 GAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRLDLNM 111 (117)
T ss_dssp EEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCCSSCEEEEEESSCCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEECCcc
Confidence 79999999999999999449999999999999999999999999988777899999886543
No 15
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.16 E-value=9.1e-11 Score=91.19 Aligned_cols=59 Identities=20% Similarity=0.300 Sum_probs=52.7
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC--cEEEEEecC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSS--NLIITVKPA 61 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg--~VtLtV~p~ 61 (241)
.+||.+|.+|++|++.|.|++||+|++|||+++.+++|++++++|++... .++|++.+.
T Consensus 29 ~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~p 89 (95)
T 3gge_A 29 YAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEP 89 (95)
T ss_dssp CCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred cEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEECc
Confidence 47999999999999999999999999999999999999999999998765 466666543
No 16
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=1.3e-10 Score=90.10 Aligned_cols=62 Identities=24% Similarity=0.410 Sum_probs=55.8
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
+++|..|.+++||+++|.|++||+|++|||+++.++++++++.+|+..+..+.|+|.+.++.
T Consensus 43 ~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 43 VITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEKVRLEILPVPQS 104 (117)
T ss_dssp EEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSEEEEEECCBTTB
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCCC
Confidence 49999999999999999559999999999999998999999999996666799999887653
No 17
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=1.7e-10 Score=89.97 Aligned_cols=62 Identities=18% Similarity=0.395 Sum_probs=56.8
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
|++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++...+.|.|+|.+.++.
T Consensus 54 gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g~~ 115 (117)
T 2fne_A 54 PIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDET 115 (117)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECSCE
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcc
Confidence 68999999999999999449999999999999999999999999998877899999887653
No 18
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.15 E-value=1.8e-10 Score=84.28 Aligned_cols=66 Identities=21% Similarity=0.379 Sum_probs=53.5
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANMS 68 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~~ 68 (241)
|++|..|.+++||+++|.|+.||+|++|||+++.+++++++..+++...+.+.|+|.+.++...+.
T Consensus 24 gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g~~~~~~ 89 (92)
T 3cyy_A 24 HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDERATLLN 89 (92)
T ss_dssp EEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC--------
T ss_pred CEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCCceeeee
Confidence 789999999999999993399999999999999999999999999877678889998887665543
No 19
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.14 E-value=1.2e-10 Score=89.37 Aligned_cols=66 Identities=18% Similarity=0.350 Sum_probs=59.4
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcC-CCCHHHHHHHHHhCCCcEEEEEecCCccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVA-GKSLDQVTDMMVANSSNLIITVKPANQRANM 67 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~-glshdeVv~LLKsssg~VtLtV~p~~q~~~~ 67 (241)
.|++|..|.+++||+++|.|++||+|++|||+++. ++++.+++.+++..+..+.|+|.+.++...+
T Consensus 49 ~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~~~ 115 (117)
T 2o2t_A 49 LGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKAKDTVQLVIARGSLPQYY 115 (117)
T ss_dssp EEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHCCSEEEEEEESSCCGGGG
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCEEEEEEEeCCcceee
Confidence 37999999999999999944999999999999998 9999999999998777899999998776654
No 20
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.14 E-value=1e-10 Score=108.88 Aligned_cols=118 Identities=16% Similarity=0.219 Sum_probs=88.4
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHh--CCCcEEEEEecCCcccccccccCCCCCCCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVA--NSSNLIITVKPANQRANMSVPRRGSYSRTS 79 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKs--ssg~VtLtV~p~~q~~~~~~~R~~~~~~~s 79 (241)
.|++|..|.+||||+++|| ++||+|++|||+++.++++++++.+|+. .+..+.|+|.+.++...-.++ .
T Consensus 31 ~gi~V~~V~~gspA~~aGL-~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~~~~~~~~~~-------~- 101 (391)
T 3tsz_A 31 VGIFVAGVLEDSPAAKEGL-EEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVE-------S- 101 (391)
T ss_dssp TEEEEEEECTTCHHHHTTC-CTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHHHHGGGTS-------S-
T ss_pred CCEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeCCcccccccc-------c-
Confidence 4799999999999999996 9999999999999999999999999986 344799999987654432110 0
Q ss_pred CCCCCCCCCCcCcccCCCCCCcchhhhhhcccccceeecccCCCCcccceeeeEEEEEeec--ccccchhcccccc
Q psy16075 80 QLSSDSHQSTQSIATTNNSEDDEQDEVVDLTGITLEICRIEPSTNSDIFERTKIVFVFTML--SKTTKWMSDMNGH 153 (241)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~t~s~~~~~~~i~~~~~~~--~~~~~~~~~~~~~ 153 (241)
. ..+.-.|+++..+.... ..+..|.+++|+++.+.. +...||++.-.+.
T Consensus 102 -----------~--------~~~~~~vral~dy~~~~------~~~Lsf~~Gdil~V~~~~~~~d~~wW~a~~~~~ 152 (391)
T 3tsz_A 102 -----------D--------VGDSFYIRTHFEYEKES------PYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGK 152 (391)
T ss_dssp -----------C--------CSCCEEEEECSCBCCSS------TTBCCBCTTCEEEEEESSGGGSSSEEEEEEECG
T ss_pred -----------c--------cccccccccccccCCCC------CCcceEccCCEEEEEeccCCCCCCeEEEEEeCC
Confidence 0 01223455555543311 257899999999999985 4578999876543
No 21
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.14 E-value=2e-10 Score=84.45 Aligned_cols=62 Identities=21% Similarity=0.340 Sum_probs=56.1
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRA 65 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~ 65 (241)
|++|..|.+++||+++|+ ++||+|++|||+++....+.++..+++..+..+.|+|.+.++..
T Consensus 28 g~~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g~~~ 89 (91)
T 2pkt_A 28 PLAISRVTPGSKAALANL-CIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVARSEHES 89 (91)
T ss_dssp EEEEEEECTTSHHHHTTC-CTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEEECCCC
T ss_pred CeEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCccc
Confidence 789999999999999997 99999999999999999999999999875567999999877654
No 22
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.14 E-value=2.3e-10 Score=83.98 Aligned_cols=61 Identities=30% Similarity=0.450 Sum_probs=55.2
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.+++||+++|+ ++||+|++|||+++.+.+++++.++++..+..+.|+|.+.+.
T Consensus 28 ~gv~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 88 (90)
T 2he4_A 28 PGQYIRSVDPGSPAARSGL-RAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 88 (90)
T ss_dssp SSEEEEEECTTSHHHHHTC-CTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHCCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEccCC
Confidence 4799999999999999996 999999999999999999999999998776679999987653
No 23
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.13 E-value=1.4e-10 Score=91.15 Aligned_cols=60 Identities=20% Similarity=0.411 Sum_probs=55.1
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
.|++|..|.++|||+++|.|++||+|++|||+++.++++++++.+|+..+..|.|+|.+.
T Consensus 53 ~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~v~R~ 112 (118)
T 3b76_A 53 LPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSSSIVLKALEV 112 (118)
T ss_dssp CCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCCSEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 379999999999999999449999999999999999999999999998877899988864
No 24
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.13 E-value=1.5e-10 Score=89.20 Aligned_cols=62 Identities=19% Similarity=0.384 Sum_probs=55.2
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC---C-cEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANS---S-NLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsss---g-~VtLtV~p~~q 63 (241)
++++|..|.+++||+++|.|++||+|++|||+++.+++|++++++|+... + .+.|.+.+.++
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeCCC
Confidence 36999999999999999955999999999999999999999999999877 3 57888887654
No 25
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.13 E-value=2.8e-10 Score=85.97 Aligned_cols=62 Identities=37% Similarity=0.620 Sum_probs=55.6
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
++++|..|.+++||+++|+ +.||+|++|||+++.+++++++..+++..+..+.|+|.+....
T Consensus 43 p~~~V~~v~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 43 PLQHVSAVLPGGAADRAGV-RKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSVESE 104 (107)
T ss_dssp CCEEEEEECTTSHHHHHTC-CTTCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEECSSCC
T ss_pred CceEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEcCCCC
Confidence 4567999999999999996 9999999999999999999999999997777899999876543
No 26
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.13 E-value=2.4e-10 Score=86.39 Aligned_cols=65 Identities=18% Similarity=0.371 Sum_probs=56.1
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANM 67 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~ 67 (241)
|++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++..+..+.|+|.+.++...+
T Consensus 34 gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~~~ 98 (105)
T 2awx_A 34 SIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTSDFVYLKVAKPTSMYIS 98 (105)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCCSEEEEEEECCCC----
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcCCCCCCc
Confidence 89999999999999999449999999999999999999999999987766899999987765544
No 27
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=2.2e-10 Score=85.32 Aligned_cols=60 Identities=28% Similarity=0.514 Sum_probs=54.1
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
.+++|..|.+++||+++|.|++||+|++|||+++ +.+++++.++|+...+.+.|+|.+..
T Consensus 29 ~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~l~v~~~~ 88 (91)
T 2e7k_A 29 GELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVILKILSGP 88 (91)
T ss_dssp SSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBCEEEECCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 4789999999999999985599999999999999 78999999999987778999998754
No 28
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.13 E-value=2.4e-10 Score=84.58 Aligned_cols=62 Identities=31% Similarity=0.524 Sum_probs=56.0
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
+|++|..|.++|||+++|.|++||+|++|||+++.++++.++..+++..+..+.|+|.+.++
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVNLTIARPGK 90 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEEESC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEcCCc
Confidence 48999999999999999944999999999999999999999999998777789999987654
No 29
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.13 E-value=3e-10 Score=82.83 Aligned_cols=59 Identities=17% Similarity=0.278 Sum_probs=54.6
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
|++|..|.+++||+++|+ ++||+|++|||+++.+++++++.++++.....+.|+|.+.+
T Consensus 27 g~~V~~V~~~spA~~aGL-~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 85 (87)
T 2pa1_A 27 PIMVTKVAERGKAKDADL-RPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRIT 85 (87)
T ss_dssp EEEEEEECSSSHHHHTTC-CTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEEECC
T ss_pred CEEEEEECCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEecC
Confidence 789999999999999997 99999999999999988899999999877778999998765
No 30
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.13 E-value=2.2e-10 Score=84.90 Aligned_cols=63 Identities=19% Similarity=0.383 Sum_probs=55.9
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRA 65 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~ 65 (241)
|++|..|.+++||+++|.|++||+|++|||+++.+++++++..+++..+..+.|+|.+.++..
T Consensus 33 ~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~~ 95 (97)
T 2jil_A 33 PVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEAALLIEYDVSET 95 (97)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEEEEEEECCCC
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCcC
Confidence 789999999999999993399999999999999988899999999985567899998866543
No 31
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=1.9e-10 Score=89.53 Aligned_cols=60 Identities=22% Similarity=0.432 Sum_probs=55.0
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
|++|..|.++|||+++|.|++||+|++|||+++.++++++++.+++..+..|.|+|.+.+
T Consensus 55 gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 114 (117)
T 2byg_A 55 SIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKPT 114 (117)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 799999999999999994499999999999999999999999999977667999998754
No 32
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.12 E-value=2.9e-10 Score=86.84 Aligned_cols=67 Identities=21% Similarity=0.378 Sum_probs=59.6
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANMS 68 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~~ 68 (241)
.|++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++..+..+.|+|.+.++..++.
T Consensus 35 ~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~ 101 (113)
T 2g5m_B 35 LGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGRERPGEQSE 101 (113)
T ss_dssp EEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHSCSSCEEEEEECCCCTTSS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCCCCCcch
Confidence 3799999999999999994499999999999999999999999999988778999999887655543
No 33
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=1.8e-10 Score=89.15 Aligned_cols=66 Identities=26% Similarity=0.337 Sum_probs=57.9
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANM 67 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~ 67 (241)
.|++|..|.+++||+++|.|++||+|++|||++|.++++.+++.+++.....|.|+|.+..+..+.
T Consensus 47 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~ 112 (120)
T 2eno_A 47 SGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQVQNG 112 (120)
T ss_dssp CSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHHCSEEEEEEEEEEECCCS
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcCCCC
Confidence 379999999999999999449999999999999999999999999987766799999887655443
No 34
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.12 E-value=5e-10 Score=88.23 Aligned_cols=60 Identities=22% Similarity=0.257 Sum_probs=54.0
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC--CcEEEEEecCC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANS--SNLIITVKPAN 62 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsss--g~VtLtV~p~~ 62 (241)
|++|..|.+++||+++|.|++||+|++|||+++.++++++++++|+... ..|.|+|.+..
T Consensus 44 ~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 44 FLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGY 105 (129)
T ss_dssp EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECS
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 5899999999999999944999999999999999999999999998874 36889998764
No 35
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.12 E-value=8.4e-11 Score=112.68 Aligned_cols=116 Identities=16% Similarity=0.211 Sum_probs=86.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHh--CCCcEEEEEecCCcccccccccCCCCCCCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVA--NSSNLIITVKPANQRANMSVPRRGSYSRTS 79 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKs--ssg~VtLtV~p~~q~~~~~~~R~~~~~~~s 79 (241)
.|++|.+|.+||||+++|| ++||+|++|||++|.++++++++.+|+. .+..|.|+|.+.++...-.++ +
T Consensus 23 ~Gi~V~~V~~gspA~~aGL-~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g~~~~~~~~--------~ 93 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEGL-EEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVE--------S 93 (468)
T ss_dssp TEEEEEEECSSSHHHHTTC-CTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHHHHHHHHH--------H
T ss_pred CCEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCccchhhhc--------c
Confidence 4899999999999999996 9999999999999999999999999988 455799999987654332111 0
Q ss_pred CCCCCCCCCCcCcccCCCCCCcchhhhhhcccccceeecccCCCCcccceeeeEEEEEeec--ccccchhcccc
Q psy16075 80 QLSSDSHQSTQSIATTNNSEDDEQDEVVDLTGITLEICRIEPSTNSDIFERTKIVFVFTML--SKTTKWMSDMN 151 (241)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~t~s~~~~~~~i~~~~~~~--~~~~~~~~~~~ 151 (241)
+ + .+.-.|+++..+.... .....|.+++|+++..++ +...||++.-.
T Consensus 94 ~----~---------------g~s~yVralfdy~~~~------~~~LsF~~GDIL~V~d~~~~~d~~wW~A~~~ 142 (468)
T 3shw_A 94 D----V---------------GDSFYIRTHFEYEKES------PYGLSFNKGEVFRVVDTLYNGKLGSWLAIRI 142 (468)
T ss_dssp T----C---------------CCCEEEEECSCBCCSS------TTBCCBCTTCEEEEEESSGGGCTTEEEEEEE
T ss_pred c----c---------------ccccccccccCcCCCC------CCCceEccCCEEEEeecccCCCCCeEEEEEc
Confidence 0 0 0112344444433211 367889999999999986 34689998764
No 36
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.11 E-value=3.4e-10 Score=83.16 Aligned_cols=61 Identities=28% Similarity=0.510 Sum_probs=55.4
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
.|++|..|.++|||+++|.|++||+|++|||+++.+++++++..+++..+..+.|+|.+.+
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 89 (92)
T 2qg1_A 29 TGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTLEVGRIS 89 (92)
T ss_dssp CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEccc
Confidence 4799999999999999994499999999999999999999999999887778999998764
No 37
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.11 E-value=1e-10 Score=86.23 Aligned_cols=62 Identities=31% Similarity=0.528 Sum_probs=52.7
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
.|++|..|.+++||+++|+ ++||+|++|||+++.+++++++.++|+..+..+.|+|.+.++.
T Consensus 27 ~g~~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 88 (91)
T 2vsp_A 27 PGSFIKEVQKGGPADLAGL-EDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGKKAQ 88 (91)
T ss_dssp SCCBC-CCCTTSHHHHTTC-CTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEEEEEEC----
T ss_pred CCeEEEEECCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeCCcc
Confidence 4789999999999999996 9999999999999999999999999987755799999887654
No 38
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=3.8e-10 Score=84.45 Aligned_cols=62 Identities=23% Similarity=0.393 Sum_probs=54.4
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.++|||+++|.|++||+|++|||+++.+++++++..+|+...+.+.|+|.+..+
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 39 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp --EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCCC
T ss_pred CCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCC
Confidence 37999999999999999933999999999999999888999999999877789999987643
No 39
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.11 E-value=4e-10 Score=83.64 Aligned_cols=64 Identities=23% Similarity=0.316 Sum_probs=57.1
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRA 65 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~ 65 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.++..+++.....+.|+|.+.++..
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~ 93 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRVRLTLYRDEAPY 93 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEECSSCC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcCCCCC
Confidence 4899999999999999994499999999999999999999999999877778899998876544
No 40
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=2.1e-10 Score=87.20 Aligned_cols=68 Identities=26% Similarity=0.510 Sum_probs=60.5
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANMSV 69 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~~~ 69 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++.....+.|+|.+.++...+.+
T Consensus 36 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~~~~v 103 (110)
T 1um1_A 36 PGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGKKMRFLVAKSDVETAKKI 103 (110)
T ss_dssp SSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCCSEEEEEEECCCHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcceeEEE
Confidence 47999999999999999944999999999999999999999999998876689999999887666544
No 41
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.11 E-value=3.8e-10 Score=84.03 Aligned_cols=63 Identities=29% Similarity=0.511 Sum_probs=55.6
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.+++++++..+++..+..+.|+|.+.++.
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDA 92 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Confidence 478999999999999999349999999999999998899999999985556789999876654
No 42
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.11 E-value=4.7e-10 Score=82.23 Aligned_cols=59 Identities=31% Similarity=0.400 Sum_probs=52.5
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
.|++|..|.+++||+++|+ ++||+|++|||+++.++++.++..+++...+.+.+.+.+.
T Consensus 27 ~g~~V~~V~~~spA~~aGL-~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~r 85 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGL-LAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP 85 (91)
T ss_dssp SSEEEEEECTTSHHHHTTC-CTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEcC
Confidence 4899999999999999996 9999999999999999999999999998777776665543
No 43
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.10 E-value=4.3e-10 Score=82.73 Aligned_cols=60 Identities=22% Similarity=0.421 Sum_probs=54.2
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
|++|..|.+++||+++|.|++||+|++|||+++.++++.++..+++.....+.|+|.+.+
T Consensus 34 gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~g 93 (94)
T 2fe5_A 34 SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG 93 (94)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCCSEEEEEEECCC
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcCC
Confidence 799999999999999994499999999999999988999999999877778888887754
No 44
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.10 E-value=2.6e-10 Score=83.46 Aligned_cols=60 Identities=30% Similarity=0.378 Sum_probs=54.1
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
|++|..|.+++||+++|+ ++||+|++|||+++.++++.++..+++..+..+.|+|.+.++
T Consensus 28 ~v~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 28 PLSISRLTPGGKAAQAGV-AVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRAIT 87 (89)
T ss_dssp EEEEEEECTTSHHHHTTC-CTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeCCC
Confidence 689999999999999996 999999999999999999999999998776678898877543
No 45
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.10 E-value=4.3e-10 Score=84.98 Aligned_cols=63 Identities=30% Similarity=0.510 Sum_probs=56.5
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..+..+.|+|.+.++.
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 38 LGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAI 100 (106)
T ss_dssp EEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCCSS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcc
Confidence 379999999999999999449999999999999999999999999987766899999887653
No 46
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.10 E-value=4.2e-10 Score=83.23 Aligned_cols=61 Identities=26% Similarity=0.500 Sum_probs=54.7
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.++..+++..+..+.|+|.+..
T Consensus 33 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 93 (96)
T 1d5g_A 33 GGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKGQ 93 (96)
T ss_dssp SCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEECCS
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcCC
Confidence 3899999999999999994499999999999999999999999999876667889987754
No 47
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.10 E-value=4.3e-10 Score=83.84 Aligned_cols=60 Identities=17% Similarity=0.282 Sum_probs=55.3
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
|++|..|.+++||+++|+ +.||+|++|||+++.+++++++..+++..+..+.|+|.+.++
T Consensus 35 g~~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 94 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAGL-RAGDLITHINGESVLGLVHMDVVELLLKSGNKISLRTTALEN 94 (99)
T ss_dssp EEEEEEECTTSHHHHHTC-CTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEECSCS
T ss_pred CeEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHhcCCCEEEEEEEECCC
Confidence 678999999999999996 999999999999999999999999999777789999998654
No 48
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.10 E-value=2.2e-10 Score=89.65 Aligned_cols=60 Identities=23% Similarity=0.385 Sum_probs=55.0
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcC-CCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVA-GKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~-glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
|++|..|.+++||+++|.|++||+|++|||+++. ++++++++.+|+..+..|.|+|.+..
T Consensus 55 gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v~l~v~r~~ 115 (128)
T 2db5_A 55 DIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTTGSLRLIVAREP 115 (128)
T ss_dssp EEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHCCSEEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCeEEEEEEcCC
Confidence 7999999999999999945999999999999997 99999999999987778999998763
No 49
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.10 E-value=2.8e-10 Score=82.24 Aligned_cols=59 Identities=24% Similarity=0.366 Sum_probs=53.7
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
|++|..|.+++||+++|+ ++||+|++|||+++.+.++.++..+++.....+.|+|.+.+
T Consensus 26 ~v~V~~V~~~spA~~aGl-~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 84 (85)
T 1rgw_A 26 PLTISRITPGSKAAQSQL-SQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSK 84 (85)
T ss_dssp CCBEEEECTTSHHHHSSC-CCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEEESCC
T ss_pred CeEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 689999999999999997 99999999999999999999999999877677889988754
No 50
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.09 E-value=4.5e-10 Score=83.62 Aligned_cols=58 Identities=24% Similarity=0.362 Sum_probs=53.6
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
|++|..|.+++||+++|| ++||+|++|||+++..++++++..+|+...+.+.|+|.+.
T Consensus 38 ~~~V~~V~~~spA~~aGL-~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~ 95 (96)
T 2ego_A 38 VTFVARVHESSPAQLAGL-TPGDTIASVNGLNVEGIRHREIVDIIKASGNVLRLETLYG 95 (96)
T ss_dssp EEEEEEECTTCHHHHTTC-CTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEECC
T ss_pred CeEEEEECCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEEC
Confidence 689999999999999996 9999999999999998889999999998877888888764
No 51
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.09 E-value=1.2e-10 Score=91.85 Aligned_cols=62 Identities=27% Similarity=0.461 Sum_probs=55.8
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC-------CCcEEEEEecCCcc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN-------SSNLIITVKPANQR 64 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss-------sg~VtLtV~p~~q~ 64 (241)
|++|..|.+++||+++|.|++||+|++|||+++.+++|++++++|+.. ...|.|+|.+....
T Consensus 56 gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~~~ 124 (127)
T 1wg6_A 56 GIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRSGP 124 (127)
T ss_dssp EEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECSCS
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCCCC
Confidence 799999999999999995599999999999999999999999999865 56799999886543
No 52
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.09 E-value=3.4e-10 Score=83.41 Aligned_cols=60 Identities=32% Similarity=0.416 Sum_probs=53.6
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
|++|..|.+++||+++|| ++||+|++|||+++.+++++++..+|+...+.+.+++.+...
T Consensus 30 ~~~V~~v~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~r~~~ 89 (95)
T 3r68_A 30 GQIIKDIEPGSPAEAAGL-KNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKEL 89 (95)
T ss_dssp SEEEECCCTTSHHHHHTC-CTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEECC-
T ss_pred CEEEEEECCCCHHHHCCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEECCcc
Confidence 799999999999999996 999999999999999999999999999877778877766543
No 53
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.09 E-value=3.1e-10 Score=85.56 Aligned_cols=65 Identities=26% Similarity=0.356 Sum_probs=58.0
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANMS 68 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~~ 68 (241)
+++|..|.+++||+++|+ ++||+|++|||+++.++++.++..+++.....+.|+|.+.++..++.
T Consensus 30 ~v~V~~V~~~spA~~aGL-~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~ 94 (103)
T 1wf7_A 30 PLTISSLKDGGKASQAHV-RIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAAAKSE 94 (103)
T ss_dssp EEEECCCCTTCHHHHTTC-CTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEEEEECCCSCCCCCC
T ss_pred CEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCcCCCC
Confidence 488999999999999996 99999999999999988899999999877667999999887766554
No 54
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.09 E-value=4.6e-10 Score=83.33 Aligned_cols=60 Identities=28% Similarity=0.460 Sum_probs=54.1
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
|++|..|.+++||+++|.|++||+|++|||+++.++++.++..+++..+..+.|+|.+.+
T Consensus 38 g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g 97 (98)
T 1ihj_A 38 GIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQTFD 97 (98)
T ss_dssp EEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEC-
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCC
Confidence 799999999999999993399999999999999999999999999886668999998764
No 55
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.09 E-value=2.7e-10 Score=86.89 Aligned_cols=60 Identities=25% Similarity=0.343 Sum_probs=53.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC-CcEEEEEecC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANS-SNLIITVKPA 61 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsss-g~VtLtV~p~ 61 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++++++++|+... +.|.|+|.+.
T Consensus 44 ~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R~ 104 (108)
T 2d92_A 44 SVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICSG 104 (108)
T ss_dssp EEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcC
Confidence 36999999999999999955999999999999999999999999999864 4788888764
No 56
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.08 E-value=5.7e-10 Score=84.87 Aligned_cols=68 Identities=24% Similarity=0.395 Sum_probs=60.0
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC-CcEEEEEecCCccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANS-SNLIITVKPANQRANMSV 69 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsss-g~VtLtV~p~~q~~~~~~ 69 (241)
.|++|..|.+++||+++|+|++||+|++|||+++.+++++++.++++... ..+.|+|.+.++...+.+
T Consensus 26 ~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~~~~~ 94 (112)
T 1qau_A 26 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEGFTTHL 94 (112)
T ss_dssp SCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEEEEECCTTSEEEE
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEEEEeCCcccceEe
Confidence 37999999999999999977999999999999999888999999998754 479999998887666554
No 57
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.08 E-value=5.9e-10 Score=81.22 Aligned_cols=59 Identities=24% Similarity=0.365 Sum_probs=53.5
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
+++|..|.+++||+++|+ ++||+|++|||+++.+++++++..+++..+..+.|+|.+.+
T Consensus 28 ~~~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g 86 (88)
T 2uzc_A 28 PLTISSLKDGGKAAQANV-RIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTLQRES 86 (88)
T ss_dssp EEEEEEECTTSHHHHTTC-CTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCC
T ss_pred CeEEEEECCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 689999999999999996 99999999999999998899999999877667889987754
No 58
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=5.6e-10 Score=82.38 Aligned_cols=60 Identities=23% Similarity=0.232 Sum_probs=53.8
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
|++|..|.+++||+++|+ +.||+|++|||+++.++++.++..+++..+..+.|+|.+...
T Consensus 25 ~~~V~~V~~~spA~~aGl-~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 84 (91)
T 2f5y_A 25 PVRVQAVDSGGPAERAGL-QQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVP 84 (91)
T ss_dssp SCEEEEECTTSHHHHHTC-CTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEECC-
T ss_pred CEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 689999999999999996 999999999999999999999999998766678898887654
No 59
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.07 E-value=3.9e-10 Score=94.19 Aligned_cols=59 Identities=24% Similarity=0.437 Sum_probs=54.7
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p 60 (241)
.|++|..|.+++||+++|.|++||+|++|||++|.++++.+++.+|+..+..|.|+|.+
T Consensus 111 ~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g~~v~L~V~R 169 (170)
T 3egg_C 111 LGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGR 169 (170)
T ss_dssp BEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEe
Confidence 36999999999999999955999999999999999999999999999877789999876
No 60
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.07 E-value=5.6e-10 Score=87.24 Aligned_cols=65 Identities=22% Similarity=0.478 Sum_probs=57.5
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRAN 66 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~ 66 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.+++++++.++|+..+..+.|+|.+.++...
T Consensus 46 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~~ 110 (129)
T 2dmz_A 46 SGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRNAGQVVHLTLVRRKTSSS 110 (129)
T ss_dssp CEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHHCCSSEEEEEEEESSSSS
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcccc
Confidence 47999999999999999944999999999999999999999999999866689999988765443
No 61
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=3.8e-10 Score=85.60 Aligned_cols=61 Identities=26% Similarity=0.531 Sum_probs=55.4
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
|++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++.....+.|+|.+...
T Consensus 41 gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 41 GIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKP 101 (107)
T ss_dssp EEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHCCSEEEEEEEEECC
T ss_pred CEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCCC
Confidence 7999999999999999944999999999999999999999999999877789999987543
No 62
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.07 E-value=3.2e-10 Score=84.16 Aligned_cols=62 Identities=16% Similarity=0.260 Sum_probs=56.4
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRA 65 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~ 65 (241)
|++|..|.+++||+++|+ ++||+|++|||+++..++++++..+++.....+.|+|.+.++..
T Consensus 31 g~~V~~V~~~spA~~aGL-~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g~~~ 92 (94)
T 1vb7_A 31 PIIVTKVTERGKAEAADL-RPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRSSGPS 92 (94)
T ss_dssp EEECCCBCTTSSHHHHTC-CTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCCCCC
T ss_pred CeEEEEECCCCHHHHCCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCcCC
Confidence 689999999999999997 99999999999999988899999999877778999999876543
No 63
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.07 E-value=4.3e-10 Score=87.70 Aligned_cols=63 Identities=22% Similarity=0.429 Sum_probs=57.3
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++.....+.|+|.+.++.
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~ 113 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRNEDA 113 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSEEEEEEEECTTH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCc
Confidence 489999999999999999449999999999999999999999999988877899999887654
No 64
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.07 E-value=4.7e-10 Score=85.04 Aligned_cols=60 Identities=25% Similarity=0.401 Sum_probs=54.7
Q ss_pred cEEEEEEcCCCHHhhh-CCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 3 GIFISRLVPGGLAEST-GLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 3 GIfIs~VvpGSpAerA-GLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
|++|..|.+++||+++ |+ ++||+|++|||+++.++++++++.+++...+.+.|+|.+...
T Consensus 36 ~~~V~~V~~~s~A~~a~gL-~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 36 PILISEIHPGQPADRCGGL-HVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVYVAL 96 (103)
T ss_dssp EEEEEEECTTSHHHHHTCC-CSSEEEEEETTEESTTSCHHHHHHHHHHCCSEEEEEEEECC-
T ss_pred CEEEEEECCCCHHHHhCCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecCC
Confidence 6899999999999996 76 999999999999999999999999999888889999987643
No 65
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=3.3e-10 Score=86.99 Aligned_cols=63 Identities=19% Similarity=0.346 Sum_probs=56.1
Q ss_pred cEEEEEEcCCCHHhh-hCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccc
Q psy16075 3 GIFISRLVPGGLAES-TGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRAN 66 (241)
Q Consensus 3 GIfIs~VvpGSpAer-AGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~ 66 (241)
+++|..|.+++||++ +|| ++||+|++|||+++.+++++++.++|+.....+.|+|.+.++...
T Consensus 44 ~~~V~~V~~~spA~~~agL-~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~~~ 107 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKL-KVGDRILAVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQEELNS 107 (114)
T ss_dssp SCEEEEECTTCTTGGGSSC-CTTCBEEEETTBCTTTSCHHHHHHHHHHTTTEEEEEECCCSCCCC
T ss_pred CeEEEEECCCChHHHhCCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcCCC
Confidence 469999999999999 897 999999999999999888999999999866678999988766554
No 66
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.07 E-value=6.3e-10 Score=83.19 Aligned_cols=62 Identities=24% Similarity=0.364 Sum_probs=54.9
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.++..+++..+..+.|+|.+.++
T Consensus 37 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 37 SGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLE 98 (101)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTCCSEEEEEEEEESC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCC
Confidence 37999999999999999944999999999999999999999999998776678899876543
No 67
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.06 E-value=4.1e-10 Score=89.67 Aligned_cols=60 Identities=27% Similarity=0.382 Sum_probs=55.6
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
|++|..|.+++||+++|| ++||+|++|||+++.++++++++.+++..+..+.|+|.+..+
T Consensus 66 gv~V~~V~~gspA~~aGL-~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 66 LQYLESVDEGGVAWRAGL-RMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTR 125 (132)
T ss_dssp SEEEEEECTTSGGGGGTC-CTTCEEEEESSSBCTTSCHHHHHHHHHHTTTEEEEEEECCCC
T ss_pred CEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 799999999999999995 999999999999999999999999999877789999987654
No 68
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.06 E-value=3.5e-10 Score=87.01 Aligned_cols=60 Identities=18% Similarity=0.265 Sum_probs=54.6
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
.|++|..|.++|||+++|.|++||+|++|||+++.+++++++..+++...+.+.|+|.+.
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 84 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRP 84 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeC
Confidence 479999999999999999449999999999999999999999999988777899988864
No 69
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.06 E-value=5e-10 Score=83.75 Aligned_cols=60 Identities=18% Similarity=0.259 Sum_probs=54.2
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.++..+++...+.+.|+|.+.
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 90 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVSMEVTRP 90 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECC
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEEEeC
Confidence 478999999999999999339999999999999999999999999988777899988864
No 70
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.06 E-value=7.5e-10 Score=80.20 Aligned_cols=58 Identities=22% Similarity=0.271 Sum_probs=51.1
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEec
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKP 60 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p 60 (241)
|++|..|.+++||+++|.|++||+|++|||+++.+++++++.++++.. +..+.|+|.+
T Consensus 26 ~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 26 FLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 699999999999999994499999999999999999999999999876 3467787753
No 71
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.06 E-value=4.5e-10 Score=84.93 Aligned_cols=62 Identities=23% Similarity=0.427 Sum_probs=55.4
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
|++|..|.+++||+++|.|++||+|++|||+++.+++++++..+++..+..+.|+|.+.++.
T Consensus 45 gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 45 GIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRNAGNPVRLLLIRRLPL 106 (108)
T ss_dssp CCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHHHCSEEEEEEEECCCC
T ss_pred CEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcC
Confidence 89999999999999999449999999999999998889999999987566789999876643
No 72
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.06 E-value=8.2e-10 Score=78.35 Aligned_cols=59 Identities=24% Similarity=0.406 Sum_probs=52.4
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
|++|..|.+++||+++|.|++||+|++|||+++.+++++++..+++...+.+.++|.+.
T Consensus 22 gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 80 (81)
T 2rcz_A 22 HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRD 80 (81)
T ss_dssp EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC-
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEeC
Confidence 78999999999999999339999999999999999999999999987666788888764
No 73
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.06 E-value=6.6e-10 Score=80.79 Aligned_cols=56 Identities=27% Similarity=0.455 Sum_probs=51.2
Q ss_pred cEEEEEEcCCCHHhh-hCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEe
Q psy16075 3 GIFISRLVPGGLAES-TGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59 (241)
Q Consensus 3 GIfIs~VvpGSpAer-AGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~ 59 (241)
+++|..|.+++||++ +|+ ++||+|++|||+++.++++++++.+++..+..+.|+|.
T Consensus 29 ~~~V~~V~~gspA~~~agl-~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 85 (87)
T 4e34_A 29 PILISEIHPGQPADRCGGL-HVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVV 85 (87)
T ss_dssp EEEEEEECTTSHHHHHSCC-CTTEEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CEEEEEECCCCHHHhcCCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 589999999999999 587 99999999999999999999999999987777888775
No 74
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=8.1e-10 Score=83.75 Aligned_cols=59 Identities=29% Similarity=0.528 Sum_probs=54.3
Q ss_pred CcEEEEEEcCCCHHhhh-CCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 2 PGIFISRLVPGGLAEST-GLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 2 pGIfIs~VvpGSpAerA-GLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
.|++|..|.+++||+++ || ++||+|++|||+++.++++.+++.+++.....+.|+|.+.
T Consensus 41 ~gv~V~~V~~~spA~~aggL-~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 100 (107)
T 1uhp_A 41 EGIFVSKIVDSGPAAKEGGL-QIHDRIIEVNGRDLSRATHDQAVEAFKTAKEPIVVQVLRR 100 (107)
T ss_dssp CCCEEEEECSSSHHHHTTCC-CSSCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEEC
T ss_pred CCEEEEEeCCCChHHHcCCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeC
Confidence 37999999999999999 76 9999999999999999999999999998777899988765
No 75
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.05 E-value=8.7e-10 Score=86.81 Aligned_cols=62 Identities=23% Similarity=0.393 Sum_probs=55.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.++|||+++|.|++||+|++|||+++.+++++++.++|+..++.+.|+|.+...
T Consensus 59 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 59 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp CSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 47999999999999999933999999999999999888999999999887789999987543
No 76
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.05 E-value=2.2e-10 Score=86.54 Aligned_cols=64 Identities=23% Similarity=0.362 Sum_probs=57.1
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANM 67 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~ 67 (241)
+++|..|.+++||+++|| ++||+|++|||+++..++++++.++|+.....+.|+|.+.++....
T Consensus 30 ~~~V~~V~~~spA~~aGL-~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g~~~~~ 93 (103)
T 1v5l_A 30 PLVITRITPGSKAAAANL-CPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETRLWS 93 (103)
T ss_dssp EEECSCBCTTSTTGGGTC-CTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCCTTTTSC
T ss_pred CeEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCeEccC
Confidence 689999999999999997 9999999999999998889999999987755789999988775543
No 77
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.05 E-value=5.1e-10 Score=86.32 Aligned_cols=66 Identities=23% Similarity=0.354 Sum_probs=56.7
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCc-EEEEEecCCccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSN-LIITVKPANQRANM 67 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~-VtLtV~p~~q~~~~ 67 (241)
.|++|..|.+++||+++|.|++||+|++|||++|.++++.+++.+++...+. +.++|.+.++..++
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~~~~~~~ 108 (119)
T 1x6d_A 42 KVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRKLTPEAM 108 (119)
T ss_dssp SSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEECCCSSSC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcCCCccch
Confidence 4799999999999999994499999999999999999999999999887765 44777777665543
No 78
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.05 E-value=1e-09 Score=81.08 Aligned_cols=62 Identities=29% Similarity=0.501 Sum_probs=55.5
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
.|++|..|.+++||+++|+ ++||+|++|||+++.+..+.+++..++..+..+.|+|.+.++.
T Consensus 34 ~g~~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 34 EGIFISRVSEEGPAARAGV-RVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRERET 95 (97)
T ss_dssp CSEEEEEECTTSHHHHHTC-CTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEECCSSC
T ss_pred CCEEEEEECCCChHHHcCC-CCCCEEEEECCEECCCcCHHHHHHHHhCCCCeEEEEEEeCCcc
Confidence 4799999999999999996 9999999999999999888888888877666899999987654
No 79
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.05 E-value=4.8e-10 Score=84.55 Aligned_cols=60 Identities=23% Similarity=0.461 Sum_probs=52.3
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPA 61 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~ 61 (241)
++++|..|.+++||+++|.|++||+|++|||+++.+.++++++++|+.. +..|.|+|.+.
T Consensus 37 ~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 37 PTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHC 98 (101)
T ss_dssp CCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeC
Confidence 4799999999999999654599999999999999888999999999884 45688888763
No 80
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.05 E-value=4.3e-10 Score=85.57 Aligned_cols=63 Identities=27% Similarity=0.520 Sum_probs=55.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++++++.+++..+..+.|+|.+....
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRMLVARDPAG 100 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEEEEEEESCTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCCC
Confidence 479999999999999999449999999999999999999999999987666789999876543
No 81
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.05 E-value=2.5e-10 Score=86.05 Aligned_cols=65 Identities=25% Similarity=0.398 Sum_probs=58.1
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANM 67 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~ 67 (241)
.|++|..|.+++||+++|+ ++||+|++|||+++.+++++++..+++..+..+.|+|.+.++...+
T Consensus 26 ~g~~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~~~~ 90 (106)
T 3ngh_A 26 DGHLIRVIEEGSPAEKAGL-LDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLVLDGDSYEKA 90 (106)
T ss_dssp CSCEEECCCTTSHHHHTTC-CTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEEEECHHHHHHH
T ss_pred CCEEEEEeCCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEECCeeeee
Confidence 3789999999999999996 9999999999999999999999999987777899999987665444
No 82
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.05 E-value=7.8e-10 Score=81.07 Aligned_cols=57 Identities=28% Similarity=0.424 Sum_probs=52.4
Q ss_pred cEEEEEEcCCCHHhhh-CCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q psy16075 3 GIFISRLVPGGLAEST-GLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60 (241)
Q Consensus 3 GIfIs~VvpGSpAerA-GLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p 60 (241)
|++|..|.+++||+++ |+ ++||+|++|||+++.++++.+++.+++..+..+.|+|.+
T Consensus 31 g~~V~~V~~~spA~~aggl-~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v~l~v~r 88 (90)
T 1qav_A 31 PILISKIFKGLAADQTEAL-FVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY 88 (90)
T ss_dssp EEEEEEECTTSHHHHTTCC-CTTEEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEE
T ss_pred CEEEEEECCCCHHHhcCCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEE
Confidence 6899999999999999 66 999999999999999999999999999777778888865
No 83
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.05 E-value=9.3e-10 Score=83.55 Aligned_cols=63 Identities=27% Similarity=0.499 Sum_probs=55.4
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCcc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQR 64 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q~ 64 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.+++++++.++++.. +..+.|+|.+.++.
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 39 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp SCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECCCC
T ss_pred cCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCC
Confidence 4799999999999999993399999999999999988999999999875 44788999887654
No 84
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=1.6e-09 Score=84.63 Aligned_cols=64 Identities=36% Similarity=0.555 Sum_probs=56.7
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANMS 68 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~~ 68 (241)
|++|..|.+++||+++|| ++||+|++|||+++.++.+.+++++++. ...+.|+|.+.++..++.
T Consensus 47 gv~V~~V~~~spA~~aGL-~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~v~l~v~R~g~~~~~~ 110 (128)
T 1uf1_A 47 GIYITGVDPGSEAEGSGL-KVGDQILEVNGRSFLNILHDEAVRLLKS-SRHLILTVKDVGRLPHAR 110 (128)
T ss_dssp CCEEEEECTTCHHHHHTC-CTTCEEEEETTEECSSCCHHHHHHHHTT-CSEEEEEEECCSCCSSCS
T ss_pred CEEEEEECCCCHHHHCCC-CCCCEEEEECCEECCCCCHHHHHHHHhc-CCeEEEEEEECCcccccc
Confidence 789999999999999997 9999999999999999889999999975 458999999888765543
No 85
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.04 E-value=7.8e-10 Score=86.14 Aligned_cols=59 Identities=25% Similarity=0.390 Sum_probs=54.3
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p 60 (241)
++++|..|.+++||+++|.|+.||+|++|||+++.++++++++.+++...+.+.|+|.+
T Consensus 45 ~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r 103 (125)
T 3hpk_A 45 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 103 (125)
T ss_dssp SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 46899999999999999944999999999999999999999999999888888898876
No 86
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=4.3e-10 Score=85.23 Aligned_cols=63 Identities=25% Similarity=0.480 Sum_probs=57.0
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..+..+.|+|.+.++.
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 42 GGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKGQSP 104 (108)
T ss_dssp CCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHTTSEEEEEEECCCCS
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcc
Confidence 479999999999999999449999999999999999999999999998777899999887654
No 87
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=3.9e-10 Score=86.17 Aligned_cols=61 Identities=28% Similarity=0.383 Sum_probs=53.1
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC-----CCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN-----SSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss-----sg~VtLtV~p~~ 62 (241)
++++|..|.+++||+++|.|++||+|++|||+++.+++|++++++|+.. ...+.|+|.+.+
T Consensus 32 ~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 32 PLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEFN 97 (103)
T ss_dssp SSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCCC
T ss_pred CcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEcc
Confidence 3469999999999999995599999999999999999999999999874 446788887754
No 88
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=1.2e-09 Score=83.06 Aligned_cols=63 Identities=29% Similarity=0.485 Sum_probs=56.6
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRA 65 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~ 65 (241)
.|++|..|.+++||+++|| ++||+|++|||+++.++.+.+++.+++..+..+.|+|.+.++..
T Consensus 46 ~g~~V~~V~~~spA~~aGL-~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~ 108 (110)
T 1x5q_A 46 EGIFISRVSEEGPAARAGV-RVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRESGPS 108 (110)
T ss_dssp CSEEEEEECTTSHHHHHTC-CTTCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEEECSSCC
T ss_pred CCEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCcCHHHHHHHhhCCCCeEEEEEEECCccC
Confidence 4799999999999999996 99999999999999999999999998876668999999877654
No 89
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=7.9e-10 Score=82.87 Aligned_cols=56 Identities=25% Similarity=0.523 Sum_probs=51.7
Q ss_pred EEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 5 FISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 5 fIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
+|..|.++|||+++|+ +.||+|++|||+++.+++++++.++|+..+..+.|+|.|.
T Consensus 34 ~V~~V~~~spA~~aGL-~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~p~ 89 (90)
T 1y7n_A 34 IICSLMRGGIAERGGV-RVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPA 89 (90)
T ss_dssp EEEEECTTSHHHHHTC-CSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEEECC
T ss_pred EEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 7999999999999996 9999999999999988899999999987766789998875
No 90
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.03 E-value=8.5e-10 Score=80.96 Aligned_cols=61 Identities=31% Similarity=0.628 Sum_probs=54.2
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
.+++|..|.+++||+++|.|++||+|++|||+++.+++++++..+++.....+.|+|.+..
T Consensus 30 ~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~ 90 (93)
T 2dkr_A 30 SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVKLVVRSGP 90 (93)
T ss_dssp CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEeCC
Confidence 4789999999999999963399999999999999999999999999877777888887654
No 91
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.03 E-value=3.4e-10 Score=85.51 Aligned_cols=62 Identities=32% Similarity=0.433 Sum_probs=55.1
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q 63 (241)
.+++|..|.+++||+++|.|++||+|++|||+++.++++++++++|+.. ...|.|+|.+..+
T Consensus 34 ~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 34 QPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp SCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeCCC
Confidence 3689999999999999994499999999999999988999999999876 4679999987654
No 92
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.03 E-value=1e-09 Score=84.32 Aligned_cols=62 Identities=21% Similarity=0.410 Sum_probs=55.1
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..+..+.|+|.+.++
T Consensus 49 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 110 (112)
T 2r4h_A 49 MDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRRVRLFLKRGET 110 (112)
T ss_dssp CCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEECCEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 47999999999999999944999999999999999999999999998766678999987643
No 93
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.03 E-value=1e-09 Score=83.40 Aligned_cols=58 Identities=28% Similarity=0.383 Sum_probs=53.3
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
|++|..|.+++||+++|+ +.||+|++|||+++.++++.++..+++..+..+.|+|.+.
T Consensus 46 gv~V~~V~~~spA~~aGl-~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~~~ 103 (109)
T 1q3o_A 46 LQYLESVDEGGVAWRAGL-RMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMV 103 (109)
T ss_dssp SEEEEEECTTSHHHHTTC-CTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEEEE
T ss_pred CEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEEC
Confidence 799999999999999996 9999999999999999999999999987766788888764
No 94
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.03 E-value=1.2e-09 Score=79.95 Aligned_cols=59 Identities=19% Similarity=0.361 Sum_probs=52.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
.|++|..|.+++||+++|+ ++||+|++|||+++.++.+.++..+++..+..+.|+|.+.
T Consensus 32 ~gv~V~~V~~~spA~~aGl-~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGL-KPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN 90 (91)
T ss_dssp SCEEEEEECTTSHHHHHTC-CTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 4799999999999999996 9999999999999999989999999986666788888653
No 95
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.03 E-value=5.3e-10 Score=84.52 Aligned_cols=61 Identities=33% Similarity=0.585 Sum_probs=55.3
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++.....+.|+|.+..
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 98 (105)
T 1wha_A 38 AGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAASPTIALLLEREA 98 (105)
T ss_dssp CSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSCCSCEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 4799999999999999994499999999999999999999999999877668999998764
No 96
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.03 E-value=8.4e-10 Score=82.52 Aligned_cols=62 Identities=29% Similarity=0.437 Sum_probs=55.6
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.+.++.+++.+++..+..+.|+|.+..+
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~ 96 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE 96 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEECHH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECcc
Confidence 38999999999999999934999999999999999999999999998777789999987643
No 97
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=1.9e-09 Score=84.12 Aligned_cols=60 Identities=15% Similarity=0.300 Sum_probs=53.9
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC--CcEEEEEecCC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANS--SNLIITVKPAN 62 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsss--g~VtLtV~p~~ 62 (241)
|++|..|.+++||+++|.|++||+|++|||+++.++++++++++|+... ..|.|+|.+..
T Consensus 45 gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 106 (123)
T 1ueq_A 45 FLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGY 106 (123)
T ss_dssp CCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESC
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 6999999999999999944999999999999999999999999998753 57899998764
No 98
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.02 E-value=5.6e-10 Score=81.67 Aligned_cols=59 Identities=34% Similarity=0.555 Sum_probs=52.6
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC--cEEEEEecC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSS--NLIITVKPA 61 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg--~VtLtV~p~ 61 (241)
+++|..|.+++||+++|.|++||+|++|||+++.+++++++..+++.... .+.|+|.+.
T Consensus 28 ~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~ 88 (90)
T 2q9v_A 28 PIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQT 88 (90)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEec
Confidence 58999999999999999449999999999999998899999999987643 788888764
No 99
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.02 E-value=1.2e-09 Score=82.55 Aligned_cols=60 Identities=25% Similarity=0.422 Sum_probs=54.1
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.+++||+++|| ++||+|++|||+++.++++++++++|+. +..+.|+|.+...
T Consensus 41 ~g~~V~~V~~~spA~~aGL-~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~v~l~v~r~~~ 100 (104)
T 1wi2_A 41 LGIFISKVIPDSDAHRAGL-QEGDQVLAVNDVDFQDIEHSKAVEILKT-AREISMRVRFFSG 100 (104)
T ss_dssp CCCEEEEECTTSHHHHHTC-CTTCEEEEETTEECSSCCHHHHHHHHHH-SSSEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHhC-CCEEEEEEEECCC
Confidence 3799999999999999996 9999999999999998889999999987 5679999987543
No 100
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.02 E-value=7.3e-10 Score=86.35 Aligned_cols=69 Identities=25% Similarity=0.396 Sum_probs=60.7
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC-cEEEEEecCCcccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSS-NLIITVKPANQRANMSVP 70 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg-~VtLtV~p~~q~~~~~~~ 70 (241)
.+++|..|.+++||+++|+|++||+|++|||+++.+++++++.++|+...+ .+.|+|.+.++...+.+.
T Consensus 33 ~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~~~~~~ 102 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEGFTTHLE 102 (127)
T ss_dssp SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCEEEEEECCCCSEEECCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEeCCceEEEEEE
Confidence 378999999999999999889999999999999998889999999987544 799999998877666544
No 101
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.02 E-value=9.6e-10 Score=82.58 Aligned_cols=62 Identities=24% Similarity=0.344 Sum_probs=54.9
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++.....+.|+|.+.++
T Consensus 38 ~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 99 (104)
T 2djt_A 38 TPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLS 99 (104)
T ss_dssp CCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCSEEEEEECCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 36899999999999999934999999999999999889999999998766678999987654
No 102
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.02 E-value=8.4e-10 Score=87.60 Aligned_cols=59 Identities=31% Similarity=0.559 Sum_probs=53.6
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC--CcEEEEEecC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANS--SNLIITVKPA 61 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsss--g~VtLtV~p~ 61 (241)
|++|..|.+++||+++|.|++||+|++|||+++.++++++++++|+... ..|.|+|.+.
T Consensus 66 gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 126 (131)
T 1wfg_A 66 CAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRS 126 (131)
T ss_dssp EEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEE
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcC
Confidence 7999999999999999944999999999999999999999999998874 5688888764
No 103
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.01 E-value=9.5e-10 Score=84.09 Aligned_cols=65 Identities=22% Similarity=0.307 Sum_probs=57.3
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRAN 66 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~ 66 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++.....|.|+|.+.++...
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~~ 107 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQKVRLVVYRDEAHYR 107 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSEEEEEEECCSSCCC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCcccc
Confidence 48999999999999999944999999999999999889999999998777778999988765443
No 104
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.01 E-value=1.5e-09 Score=81.27 Aligned_cols=60 Identities=32% Similarity=0.563 Sum_probs=54.5
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.+++||+++|| ++||+|++|||+++..+++.+++.+++. +..+.|+|.+.++
T Consensus 36 ~gv~V~~V~~~spA~~aGL-~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~l~v~R~g~ 95 (100)
T 2eeh_A 36 LGIFVSKVEEGSSAERAGL-CVGDKITEVNGLSLESTTMGSAVKVLTS-SSRLHMMVRRMGS 95 (100)
T ss_dssp CCEEEEEECTTSHHHHHTC-CSSCEEEEETTEECSSCCHHHHHHHHHS-CSSEEEEEEECSC
T ss_pred CCEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHhhcC-CCEEEEEEEECCc
Confidence 3799999999999999996 9999999999999998889999999985 6689999988764
No 105
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.01 E-value=1e-09 Score=82.85 Aligned_cols=58 Identities=31% Similarity=0.464 Sum_probs=52.4
Q ss_pred cEEEEEEcCCCHHhhhCC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC----cEEEEEec
Q psy16075 3 GIFISRLVPGGLAESTGL-LAVNDEVLEVNGILVAGKSLDQVTDMMVANSS----NLIITVKP 60 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGL-LqvGD~ILeINGqsV~glshdeVv~LLKsssg----~VtLtV~p 60 (241)
+++|..|.+++||+++|. |++||+|++|||+++.++++.+++.+++.... .|.|+|.+
T Consensus 44 ~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 44 PVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP 106 (107)
T ss_dssp EEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEEC
T ss_pred CeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEc
Confidence 689999999999999992 49999999999999999999999999987654 78888876
No 106
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.01 E-value=8.1e-10 Score=82.90 Aligned_cols=62 Identities=31% Similarity=0.409 Sum_probs=55.6
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
.|++|..|.+++||+++|+ ++||+|++|||+++..++++++..+++..+..+.|+|.+.+..
T Consensus 30 ~g~~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 91 (102)
T 2d90_A 30 KGQIIKDIEPGSPAEAAGL-KNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKEAE 91 (102)
T ss_dssp SSEEEECCCTTSTTTTTTC-CTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEEEEECSTTCC
T ss_pred CCEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCCc
Confidence 4799999999999999997 9999999999999998889999999987766899999876543
No 107
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.01 E-value=1.1e-09 Score=81.28 Aligned_cols=60 Identities=18% Similarity=0.202 Sum_probs=54.1
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
+++|..|.+++||+++|+ ++||+|++|||+++..+++.++..+++.....+.|+|.+.++
T Consensus 33 ~v~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 33 PLTISRVHAGSKAALAAL-CPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTLSVSSGPS 92 (94)
T ss_dssp CCEECCCCSSSHHHHTTC-CTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEEEEECCSS
T ss_pred CEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 689999999999999996 999999999999999888999999998766678999987654
No 108
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.00 E-value=1.3e-09 Score=80.02 Aligned_cols=62 Identities=18% Similarity=0.440 Sum_probs=54.5
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.++..+++..+..+.|+|.+.++
T Consensus 33 ~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 33 SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 94 (97)
T ss_dssp CCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEEEE
T ss_pred CCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 37999999999999999934999999999999999999999999998766678898877543
No 109
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.00 E-value=8.5e-10 Score=83.15 Aligned_cols=64 Identities=22% Similarity=0.453 Sum_probs=56.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRAN 66 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~ 66 (241)
.|++|..|.+++||+++|+ ++||+|++|||+++..+++.++..+++.....+.++|.+.+....
T Consensus 32 ~g~~V~~V~~~spA~~aGl-~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~~~~ 95 (106)
T 2eei_A 32 KGVYMTDITPQGVAMRAGV-LADDHLIEVNGENVEDASHEEVVEKVKKSGSRVMFLLVDKETDKR 95 (106)
T ss_dssp CSCEECCCCTTSHHHHHTC-CSSEEEEEETTEECTTCCHHHHHHHHHHHCSEEEEEECCTTTSCC
T ss_pred CCEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcCchhhH
Confidence 4789999999999999996 999999999999999999999999998777788999987665443
No 110
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.00 E-value=9.6e-10 Score=89.05 Aligned_cols=64 Identities=17% Similarity=0.377 Sum_probs=56.6
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRA 65 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~ 65 (241)
.|++|..|.+++||+++|.|++||+|++|||++|.++++++++++|+.....+.|+|.+.++..
T Consensus 130 ~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~ 193 (196)
T 3gsl_A 130 NSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNAE 193 (196)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCEEEEEEEEEESCCC
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCCeEEEEEeCCCCcc
Confidence 3789999999999999994499999999999999988899999999877667899998866544
No 111
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.00 E-value=5.3e-10 Score=83.51 Aligned_cols=62 Identities=18% Similarity=0.368 Sum_probs=55.2
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
|++|..|.+++||+++|.|++||+|++|||+++.++++.++..+++..+..+.|+|.+.++.
T Consensus 37 ~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 37 DLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLLLKRGTGS 98 (103)
T ss_dssp EEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEECEEEECTTCS
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCCC
Confidence 78999999999999999339999999999999999999999999986666788999886654
No 112
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.00 E-value=2.6e-10 Score=87.52 Aligned_cols=66 Identities=24% Similarity=0.387 Sum_probs=59.0
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANMS 68 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~~ 68 (241)
.|++|..|.+++||+++|+ ++||+|++|||+++.+.+++++..+++..+..+.|+|.+.++...+.
T Consensus 38 ~g~~V~~V~~~spA~~aGL-~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~~~~~ 103 (114)
T 2edz_A 38 DGHLIRVIEEGSPAEKAGL-LDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLVLDGDSYEKAV 103 (114)
T ss_dssp CSCEEECCCTTCTTGGGTC-CTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEEEEEECHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCcceehh
Confidence 4789999999999999997 99999999999999988899999999877668999999887665553
No 113
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.00 E-value=1.3e-09 Score=87.52 Aligned_cols=66 Identities=26% Similarity=0.438 Sum_probs=54.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC-cEEEEEecCCcccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSS-NLIITVKPANQRANMS 68 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg-~VtLtV~p~~q~~~~~ 68 (241)
.|++|..|.+++||+++|| ++||+|++|||+++.+++++++..+|+...+ .+.|+|.+.++...+.
T Consensus 64 ~gv~V~~V~~~spA~~aGL-~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~~v~ 130 (139)
T 2vz5_A 64 KGIYVTRVSEGGPAEIAGL-QIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQSLQKAVQ 130 (139)
T ss_dssp CCEEEEEECTTSHHHHHTC-CTTCEEEEETTEECTTCCHHHHHHHHCCTTCSEEEEEEEECC------
T ss_pred CCEEEEEECCCCHHHHCCC-CCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCEEEEEEEECCEEEEEE
Confidence 4899999999999999996 9999999999999999999999999986444 6899999887766543
No 114
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.00 E-value=1.6e-09 Score=81.13 Aligned_cols=58 Identities=29% Similarity=0.489 Sum_probs=51.7
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC-cEEEEEec
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSS-NLIITVKP 60 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg-~VtLtV~p 60 (241)
.|++|..|.++|||+++|+ ++||+|++|||+++.+++|+++..+++...+ .+.|+|.+
T Consensus 45 ~gv~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R 103 (104)
T 3sfj_A 45 KGIYVTRVSEGGPAEIAGL-QIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTR 103 (104)
T ss_dssp CSEEEEEECTTSHHHHHTC-CTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEEEEEE
T ss_pred CCEEEEEECCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEc
Confidence 3799999999999999996 9999999999999998899999999976544 68888765
No 115
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.99 E-value=9.3e-10 Score=84.63 Aligned_cols=62 Identities=23% Similarity=0.405 Sum_probs=55.6
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..+..+.|+|.+...
T Consensus 50 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 50 KGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKNAGNPVVFIVQSLSS 111 (117)
T ss_dssp CSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHTSCSSEEEEECCBSC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 48999999999999999944999999999999999999999999999777789999986543
No 116
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.99 E-value=1.4e-09 Score=84.74 Aligned_cols=64 Identities=20% Similarity=0.361 Sum_probs=55.7
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC--CcEEEEEecCCcccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANS--SNLIITVKPANQRAN 66 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsss--g~VtLtV~p~~q~~~ 66 (241)
+++|..|.+++||+++|.|++||+|++|||+++.+++++++.++|+... ..+.|+|.+..+...
T Consensus 46 ~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~ 111 (122)
T 1v5q_A 46 PPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAESV 111 (122)
T ss_dssp CCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEEECCCSC
T ss_pred CcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEECCcccc
Confidence 5799999999999999934999999999999999888999999998764 479999998765443
No 117
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.99 E-value=3.4e-10 Score=89.47 Aligned_cols=60 Identities=18% Similarity=0.341 Sum_probs=53.3
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCc-EEEEEecCC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSN-LIITVKPAN 62 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~-VtLtV~p~~ 62 (241)
+++|..|.+++||+++|.|++||+|++|||+++.+++|++++++|+...+. +.|+|.+..
T Consensus 58 ~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r~~ 118 (130)
T 1i16_A 58 PLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKS 118 (130)
T ss_dssp CCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEEES
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEeCC
Confidence 699999999999999933499999999999999999999999999987664 888887653
No 118
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.99 E-value=1.9e-09 Score=84.04 Aligned_cols=60 Identities=13% Similarity=0.119 Sum_probs=53.6
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCc-EEEEEecCCc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSN-LIITVKPANQ 63 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~-VtLtV~p~~q 63 (241)
+++|..|.+++||+++|+ +.||+|++|||+++..++++++.++|+...+. +.|+|.+...
T Consensus 45 ~v~V~~V~~gspA~~AGL-~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~~~~ 105 (109)
T 2vsv_A 45 PVQVHFLDPYCSASVAGA-REGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSLLD 105 (109)
T ss_dssp SCEEEEECTTSHHHHTTC-CTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEESCC-
T ss_pred CeEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEECCC
Confidence 578999999999999997 99999999999999988999999999877664 9999987543
No 119
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=1.7e-09 Score=83.14 Aligned_cols=65 Identities=23% Similarity=0.409 Sum_probs=55.9
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANM 67 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~ 67 (241)
.|++|..|.+++||+++|| ++||+|++|||+++.++.+.++..+++.....+.|+|.+..+..++
T Consensus 42 ~gv~V~~V~~~spA~~aGL-~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~ 106 (117)
T 1uit_A 42 GGIYVSKVTVGSIAHQAGL-EYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYNPHVHQL 106 (117)
T ss_dssp SCEEEEEECTTSHHHHHTC-CTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEECCCSCCCCC
T ss_pred CCEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCchhhh
Confidence 4799999999999999996 9999999999999998888888876665566799999987766544
No 120
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.99 E-value=5.6e-10 Score=80.72 Aligned_cols=58 Identities=26% Similarity=0.332 Sum_probs=52.6
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
|++|..|.+++||+++|+ +.||+|++|||+++.+++++++..+++.....+.|+|.+.
T Consensus 24 ~~~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 81 (83)
T 2kv8_A 24 PCVLSCVMRGSPADFVGL-RAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIAEG 81 (83)
T ss_dssp SCBCCBCCTTSTTTTTTC-CTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEEEECC
T ss_pred CeEEEEeCCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcC
Confidence 578999999999999996 9999999999999999899999999987666788988764
No 121
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.98 E-value=8.6e-10 Score=82.03 Aligned_cols=61 Identities=31% Similarity=0.563 Sum_probs=52.9
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCc-EEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSN-LIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~-VtLtV~p~~q 63 (241)
.|++|..|.+++||+++|+ ++||+|++|||+++..++++++.++|+...+. +.++|.+.++
T Consensus 33 ~g~~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~g~ 94 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAEASGL-RAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETD 94 (98)
T ss_dssp SCEEEEEECTTSHHHHHTC-CTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEECCHHHH
T ss_pred CCEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCch
Confidence 4899999999999999996 99999999999999988899999999877554 4577766543
No 122
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.98 E-value=2.2e-09 Score=83.80 Aligned_cols=61 Identities=26% Similarity=0.497 Sum_probs=53.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~ 62 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.+++++++.++++.. +..|.|+|.+.+
T Consensus 58 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 58 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp CCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEECC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeCC
Confidence 4799999999999999993399999999999999988899999999875 346888887754
No 123
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.98 E-value=9e-10 Score=82.92 Aligned_cols=59 Identities=24% Similarity=0.259 Sum_probs=53.5
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
+++|..|.+++||+++|+ ++||+|++|||+++.++++.++..+++...+.+.|+|.+..
T Consensus 37 ~~~V~~V~~~spA~~aGL-~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 95 (100)
T 1whd_A 37 PVRVQAVDSGGPAERAGL-QQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRVS 95 (100)
T ss_dssp SCBCCBCCTTSHHHHHTC-CSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 678999999999999997 99999999999999998999999999887777888887753
No 124
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.96 E-value=9.2e-10 Score=84.88 Aligned_cols=62 Identities=29% Similarity=0.437 Sum_probs=55.0
Q ss_pred cEEEEEEcCCCHHhhh--CCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC----CcEEEEEecCCccc
Q psy16075 3 GIFISRLVPGGLAEST--GLLAVNDEVLEVNGILVAGKSLDQVTDMMVANS----SNLIITVKPANQRA 65 (241)
Q Consensus 3 GIfIs~VvpGSpAerA--GLLqvGD~ILeINGqsV~glshdeVv~LLKsss----g~VtLtV~p~~q~~ 65 (241)
|++|..|.+++||+++ || ++||+|++|||+++.++++.+++.+++... ..+.|+|.+.....
T Consensus 42 ~v~V~~V~~~spA~~a~gGL-~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~ 109 (119)
T 2cs5_A 42 PVIVSRVAPGTPADLCVPRL-NEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNAVYD 109 (119)
T ss_dssp EEEEEEECSSSTTTSSSSCC-CTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECCCCCC
T ss_pred CeEEEEECCCCHHHHhhcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEcccccC
Confidence 6899999999999999 76 999999999999999999999999998764 37999998875433
No 125
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.96 E-value=1.6e-09 Score=79.14 Aligned_cols=60 Identities=25% Similarity=0.466 Sum_probs=52.3
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~ 62 (241)
.|++|..|.+++||+++|+ ++||+|++|||+++.+.+++++..+++.. +..+.|+|.+.+
T Consensus 28 ~g~~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 89 (90)
T 2eaq_A 28 PGIFVASVEAGSPAEFSQL-QVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYG 89 (90)
T ss_dssp TEEEEEEECTTSHHHHTTC-CTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcCC-CCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 4789999999999999997 99999999999999666999999999753 457888887654
No 126
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.95 E-value=1.1e-09 Score=84.35 Aligned_cols=61 Identities=28% Similarity=0.317 Sum_probs=54.4
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
.|++|..|.+++||+ +|| ++||+|++|||+++.++++.+++.+++..+..+.|+|.+..+.
T Consensus 46 ~gv~V~~V~~~spA~-~gL-~~GD~I~~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 46 TSIVISDVLPGGPAD-GLL-QENDRVVMVNGTPMEDVLHSFAVQQLRKSGKIAAIVVKRPRKV 106 (117)
T ss_dssp CBCEEEEECTTSSHH-HHB-CTTCEEEEESSCBCBTCCHHHHHHHHHHSCSEEEEEEEEEEEC
T ss_pred CCEEEEEECCCCccc-ccC-CCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEECCcc
Confidence 369999999999997 787 9999999999999999999999999998777899999876543
No 127
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.94 E-value=2.3e-09 Score=79.48 Aligned_cols=60 Identities=22% Similarity=0.421 Sum_probs=53.4
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.+++||+++|| ++||+|++|||+++..+.+.+++.+++ .+..+.|+|.+..+
T Consensus 29 ~g~~V~~V~~~spA~~aGL-~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGV-KEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVALTLLGSSS 88 (93)
T ss_dssp SSCEEEEECSSSTTTTTTC-CSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEEEEEEECCC
Confidence 3789999999999999996 999999999999999998999999987 56679999987643
No 128
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.94 E-value=4.6e-09 Score=81.50 Aligned_cols=60 Identities=25% Similarity=0.377 Sum_probs=53.4
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
++++|..|.+++||+++|.|++||+|++|||+++.+.+++++.++++...+.+.|+|.+.
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~ 109 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 109 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEECC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEec
Confidence 369999999999999999349999999999999988899999999988777788888654
No 129
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.94 E-value=2.4e-09 Score=83.13 Aligned_cols=69 Identities=29% Similarity=0.468 Sum_probs=58.5
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCc-EEEEEecCCcccc--ccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSN-LIITVKPANQRAN--MSVPR 71 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~-VtLtV~p~~q~~~--~~~~R 71 (241)
.|++|..|.+++||+++|+ +.||+|++|||+++.+++++++..+|+...+. +.++|.+.++... +.+.+
T Consensus 33 ~gv~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~g~~~~~~~~l~~ 104 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASGL-RAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFKKCRVIP 104 (128)
T ss_dssp CSEEEEEECTTSHHHHHTC-CTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEECHHHHHHHHHHTCCC
T ss_pred CCEEEEEeCCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEeCCcceEEEEEEEe
Confidence 4799999999999999996 99999999999999988899999999877554 6688888776555 54443
No 130
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.93 E-value=3e-09 Score=78.66 Aligned_cols=58 Identities=21% Similarity=0.367 Sum_probs=52.9
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
.|++|..|.+++||++ || ++||+|++|||+++.++++.+++.+++.....+.|+|.+.
T Consensus 35 ~gv~V~~V~~~spA~~-gL-~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 92 (95)
T 1mfg_A 35 DGIFVTRVQPEGPASK-LL-QPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVRE 92 (95)
T ss_dssp CCEEEEEECTTSTTTT-TC-CTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEEEEEE
T ss_pred CCEEEEEECCCCchhh-CC-CCCCEEEEECCEEcCCCCHHHHHHHhhcCCCeEEEEEEeC
Confidence 3899999999999999 97 9999999999999999999999999987777889988764
No 131
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.93 E-value=1.6e-09 Score=81.65 Aligned_cols=56 Identities=23% Similarity=0.357 Sum_probs=51.0
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEE
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITV 58 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV 58 (241)
.+++|..|.+++||+++|+ ++||+|++|||+++.+++++++.++|+...+.+.|+|
T Consensus 48 ~~~~V~~V~~~spA~~aGl-~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v 103 (104)
T 2z17_A 48 MFTLICKIQEDSPAHCAGL-QAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIET 103 (104)
T ss_dssp CCEEEEEECTTSHHHHHTC-CTTCBCCEETTEECTTCCHHHHHHHHHHTTTEEEEEC
T ss_pred CCeEEEEECCCChHHHcCC-CCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEE
Confidence 3799999999999999996 9999999999999999999999999998866676665
No 132
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=2e-09 Score=80.97 Aligned_cols=60 Identities=20% Similarity=0.321 Sum_probs=53.5
Q ss_pred cEEEEEEcCCCHHhhh-CCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 3 GIFISRLVPGGLAEST-GLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 3 GIfIs~VvpGSpAerA-GLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
+++|..|.+++||+++ || ++||+|++|||+++... +++++.+++.....+.|+|.+.++.
T Consensus 36 ~v~V~~V~~~spA~~agGL-~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~v~l~v~R~~~~ 96 (100)
T 2edp_A 36 PLTVSKIEDGGKAALSQKM-RTGDELVNINGTPLYGS-RQEALILIKGSFRILKLIVRRRNSG 96 (100)
T ss_dssp EEEECCCCTTSHHHHHTSC-CTTCEEEEETTEECCSC-SHHHHHHHHTCCSSCEEEEEECCCS
T ss_pred CeEEEEECCCCHHHHcCCC-CCCCEEEEECCEEccch-HHHHHHHHHhCCCeEEEEEEeCCCC
Confidence 5899999999999999 76 99999999999999976 8999999987766899999887653
No 133
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.93 E-value=5.7e-10 Score=87.40 Aligned_cols=61 Identities=31% Similarity=0.548 Sum_probs=54.9
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.+++||+++|| ++||+|++|||++|.++++++++++|+..+..|.|+|.+.++
T Consensus 61 ~gv~V~~V~~~spA~~aGL-~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAGL-CTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDS 121 (126)
T ss_dssp CCCCBCCCCSSSHHHHHTC-CSSCCCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCC
T ss_pred CCEEEEEECCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 3589999999999999996 999999999999999999999999999776678899887654
No 134
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.92 E-value=3.1e-09 Score=87.20 Aligned_cols=64 Identities=19% Similarity=0.363 Sum_probs=57.5
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEec---CCccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP---ANQRANM 67 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p---~~q~~~~ 67 (241)
.|++|..|.+++||++ || ++||+|++|||+++.++++.+++.+++..++.|.|+|.+ .++...+
T Consensus 24 ~g~~V~~v~~~spA~~-gl-~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~~G~~~~~ 90 (195)
T 2qbw_A 24 DGIFVTRVQPEGPASK-LL-QPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREVGNGAKQEI 90 (195)
T ss_dssp CSEEEEEECTTSTTTT-TC-CTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEEECSSSCEEEE
T ss_pred CCEEEEEECCCChHHh-CC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEcCCCCCCcee
Confidence 4899999999999999 97 999999999999999999999999999888889999988 6654443
No 135
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.92 E-value=2.3e-09 Score=83.35 Aligned_cols=58 Identities=22% Similarity=0.400 Sum_probs=51.9
Q ss_pred cEEEEEEcCCCHHhhh-CCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC----CCcEEEEEecC
Q psy16075 3 GIFISRLVPGGLAEST-GLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN----SSNLIITVKPA 61 (241)
Q Consensus 3 GIfIs~VvpGSpAerA-GLLqvGD~ILeINGqsV~glshdeVv~LLKss----sg~VtLtV~p~ 61 (241)
.++|.+|.+++||+++ || ++||+|++|||+++.+++|++++++|+.. +..|.|+|.+.
T Consensus 44 ~i~I~~V~~gspA~~aggL-~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGV-VKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp SEEEEECCTTSHHHHHCSS-CTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCC-CCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 3899999999999999 65 99999999999999999999999999865 44789988874
No 136
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.92 E-value=1.7e-09 Score=86.71 Aligned_cols=60 Identities=27% Similarity=0.347 Sum_probs=53.3
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC--CcEEEEEecC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANS--SNLIITVKPA 61 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsss--g~VtLtV~p~ 61 (241)
.+++|..|.+++||+++|.|++||+|++|||++|.+.++++++++|+... ..|.|+|.+.
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 36789999999999999955999999999999998889999999998743 4689999886
No 137
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.90 E-value=3.4e-09 Score=83.48 Aligned_cols=63 Identities=17% Similarity=0.309 Sum_probs=54.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHh--CCCcEEEEEecCCccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVA--NSSNLIITVKPANQRA 65 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKs--ssg~VtLtV~p~~q~~ 65 (241)
.|++|..|.+++||+++|| ++||+|++|||+++..++++++..+|+. .+..+.|+|.+..+..
T Consensus 51 ~gv~V~~V~~gspA~~aGL-~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~ 115 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGL-EEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVY 115 (124)
T ss_dssp SCEEEEEECTTCHHHHTTC-CTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECHHHH
T ss_pred CCEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCchh
Confidence 3799999999999999996 9999999999999998888999998875 3446889998876543
No 138
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.90 E-value=7e-10 Score=84.60 Aligned_cols=61 Identities=30% Similarity=0.403 Sum_probs=53.9
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++.....+.|+|.+..
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 104 (111)
T 1uju_A 44 EGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLVCDGF 104 (111)
T ss_dssp CCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSSCSSEEEECCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 3789999999999999994499999999999999999999999999876667888877653
No 139
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.90 E-value=3.4e-09 Score=87.48 Aligned_cols=60 Identities=18% Similarity=0.265 Sum_probs=54.2
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
.|++|..|.++|+|+++|.|++||+|++|||++|.++++++++.+++...+.+.|+|.+.
T Consensus 136 ~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~V~R~ 195 (206)
T 3r0h_A 136 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRP 195 (206)
T ss_dssp SCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEE
T ss_pred ceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 479999999999999999339999999999999999999999999988777888988764
No 140
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.89 E-value=3.9e-09 Score=88.08 Aligned_cols=59 Identities=32% Similarity=0.620 Sum_probs=54.6
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
|++|..|.++|||+++|+ ++||+|++|||++|.++++++++.+++. +..+.|+|.+.++
T Consensus 111 ~~~V~~V~~gspA~~aGL-~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 111 GLFISHLIKGGQADSVGL-QVGDEIVRINGYSISSCTHEEVINLIRT-EKTVSIKVRHIGL 169 (192)
T ss_dssp EEEEEEECTTSHHHHTTC-CTTEEEEEETTEECTTCCHHHHHHHHTS-SSEEEEEEEECCE
T ss_pred CEEEEEECCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHcC-CCeEEEEEEECCc
Confidence 789999999999999995 9999999999999999999999999987 6689999998765
No 141
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.89 E-value=7.7e-09 Score=92.39 Aligned_cols=62 Identities=24% Similarity=0.381 Sum_probs=56.8
Q ss_pred cEEEEEEcCCCHHhh-hCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccc
Q psy16075 3 GIFISRLVPGGLAES-TGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRA 65 (241)
Q Consensus 3 GIfIs~VvpGSpAer-AGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~ 65 (241)
|++|..|.+++||++ +|| ++||+|++|||++|.++++++++.+|+..+..|.|+|.+..+..
T Consensus 104 gi~V~~V~~gspA~~~aGL-~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~V~L~V~R~~~~~ 166 (263)
T 1z87_A 104 PILISKIFKGLAADQTEAL-FVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYMKEVS 166 (263)
T ss_dssp EEEEEECCTTSHHHHCTTC-CSSCEEEEESSCBCTTSCHHHHHHHHHHCCSCCCEEEECCSSSS
T ss_pred CEEEEEECCCCHHHHhCCC-CCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEeCcccc
Confidence 799999999999999 576 99999999999999999999999999988778999999876543
No 142
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.89 E-value=3.7e-09 Score=83.04 Aligned_cols=65 Identities=15% Similarity=0.242 Sum_probs=57.3
Q ss_pred CcEEEEEEcC--CCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccccc
Q psy16075 2 PGIFISRLVP--GGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANM 67 (241)
Q Consensus 2 pGIfIs~Vvp--GSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~ 67 (241)
.|++|..|.+ ++||+++|+ +.||+|++|||+++...+++++..+|+..+..+.|+|.+.++..++
T Consensus 44 ~gv~V~~V~~~~~spA~~aGL-~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~~~~~ 110 (118)
T 2yub_A 44 TTVQVKEVNRMHISPNNRNAI-HPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPVPQRL 110 (118)
T ss_dssp CEEEEEECCTTTSCTTHHHHC-CTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSSCCCC
T ss_pred CcEEEEEecCCCCChHHHcCC-CCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCEEEee
Confidence 4799999999 999999997 9999999999999997777999999987744789999988776554
No 143
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.87 E-value=3.2e-09 Score=79.78 Aligned_cols=58 Identities=21% Similarity=0.367 Sum_probs=53.1
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
.|++|..|.+++||++ || ++||+|++|||+++.++++.+++.+++..+..+.|+|.+.
T Consensus 43 ~gv~V~~V~~~spA~~-gL-~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 100 (103)
T 1n7t_A 43 DGIFVTRVQPEGPASK-LL-QPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVRE 100 (103)
T ss_dssp CSEECCCBSSSSTTSS-SC-CTTCEEEEETTEECSSCCHHHHHHHHHHCCSEEEEEEECC
T ss_pred CCEEEEEECCCCchHH-CC-CCCCEEEEECCEECCCCCHHHHHHHhhcCCCeEEEEEEec
Confidence 3799999999999999 97 9999999999999999999999999987777889998874
No 144
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.87 E-value=8.6e-09 Score=79.24 Aligned_cols=62 Identities=29% Similarity=0.437 Sum_probs=55.0
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.++..+++..+..+.|+|.+..+
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~ 99 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE 99 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 48999999999999999933999999999999999999999999998777789999987653
No 145
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.87 E-value=1.1e-08 Score=78.01 Aligned_cols=66 Identities=20% Similarity=0.402 Sum_probs=58.0
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANMSVPR 71 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~~~~R 71 (241)
.|++|..|.+++||+++|+ ++||.|++|||+++. +++++..+++. +..+.|+|.+.++...+.+..
T Consensus 35 ~gv~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~v~l~v~R~g~~~~~~v~~ 100 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAGL-RPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQLAVQIRRGRETLTLYVTP 100 (113)
T ss_dssp SCEEEEEEBTTSHHHHHTC-CTTCEEEEETTEECC--SHHHHHHHHHH-CSSEEEEEEETTEEEEEEECC
T ss_pred CCeEEEEeCCCChHHHcCC-CCCCEEEEECCEECC--CHHHHHHHHhC-CCeEEEEEEECCEEEEEEEEE
Confidence 4799999999999999997 999999999999998 78999999986 567999999988877665543
No 146
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.86 E-value=4.7e-09 Score=80.81 Aligned_cols=55 Identities=24% Similarity=0.416 Sum_probs=48.0
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEe
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~ 59 (241)
.|++|..|.+++||+++|+ +.||+|++|||+++.+++++++.++++.. .+.++|.
T Consensus 35 ~g~~V~~V~~~spA~~aGL-~~GD~Il~vng~~v~~~~~~~l~~~l~~~--~l~ltV~ 89 (94)
T 3kzd_A 35 RRLYVNSVKETGLASKKGL-KAGDEILEINNRAADALNSSMLKDFLSQP--SLGLLVR 89 (94)
T ss_dssp CEEEEEEECTTSHHHHTTC-CTTCEEEEETTEEGGGCCHHHHHHHHHSS--EEEEEEE
T ss_pred CCeEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHhCC--eEEEEEE
Confidence 3799999999999999997 99999999999999999999999999743 4555443
No 147
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.85 E-value=6.2e-09 Score=81.26 Aligned_cols=63 Identities=21% Similarity=0.474 Sum_probs=55.3
Q ss_pred CcEEEEEEcCCCHHhhhC-CCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC-CcEEEEEecCCccccc
Q psy16075 2 PGIFISRLVPGGLAESTG-LLAVNDEVLEVNGILVAGKSLDQVTDMMVANS-SNLIITVKPANQRANM 67 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAG-LLqvGD~ILeINGqsV~glshdeVv~LLKsss-g~VtLtV~p~~q~~~~ 67 (241)
.|++|..|.+++||+++| | ++||+|++|||++|. +++++..+|+... ..+.|+|.+.++....
T Consensus 48 ~gv~V~~V~~~spA~~aG~l-~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~g~~~~~ 112 (124)
T 1wh1_A 48 IGIYISEIDPNSIAAKDGRI-REGDRIIQINGIEVQ--NREEAVALLTSEENKNFSLLIARPELQLDE 112 (124)
T ss_dssp CCEEEEEECSSSHHHHTCCC-CTTCEEEEESSCBCC--SHHHHHHHHTCSSCCSCCEEEEECSSCCCC
T ss_pred CCEEEEEECCCCHHHHcCCC-CCCCEEEEECCEECC--CHHHHHHHHHhCCCCEEEEEEEECCEEeec
Confidence 489999999999999999 6 999999999999998 7999999998753 4689999988766554
No 148
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.85 E-value=6.6e-09 Score=79.33 Aligned_cols=65 Identities=31% Similarity=0.609 Sum_probs=56.6
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC-Ccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA-NQRANMS 68 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~-~q~~~~~ 68 (241)
.|++|..|.+++||+++|+ ++||+|++|||+++..+.+.++..+++.. ..+.|+|.+. ++...+.
T Consensus 41 ~gv~V~~V~~~s~A~~aGL-~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~v~l~v~r~~g~~~~~~ 106 (114)
T 1x5n_A 41 PGIFISHVKPGSLSAEVGL-EIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RSLTISIVAAAGRELFMT 106 (114)
T ss_dssp CSEEEEEECTTSTTTTTTC-CTTCEEEEETTEETTSCCTTHHHHHHHHC-SSEEEEECSSTTTHHHHS
T ss_pred CCEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHhcC-CeEEEEEEcCCCCceEEE
Confidence 4899999999999999996 99999999999999998888899999865 5899999887 6655443
No 149
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.84 E-value=1.1e-08 Score=84.32 Aligned_cols=63 Identities=19% Similarity=0.303 Sum_probs=56.5
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCC--CCHHHHHHHHHhCCCc-EEEEEecCCcc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAG--KSLDQVTDMMVANSSN-LIITVKPANQR 64 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~g--lshdeVv~LLKsssg~-VtLtV~p~~q~ 64 (241)
.|++|..|.+++||+++|.|+.||+|++|||+++.+ +++.+++.+++...+. +.|+|.+.++.
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~~ 110 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRADPP 110 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEECCSSC
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEecccC
Confidence 489999999999999999449999999999999998 8999999999987777 99999887543
No 150
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.84 E-value=5e-09 Score=78.41 Aligned_cols=60 Identities=33% Similarity=0.539 Sum_probs=51.2
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.+++||+++|| ++||+|++|||+++..+.+.+++.+++. ...+.|+|.+.++
T Consensus 35 ~g~~V~~V~~~spA~~aGL-~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~l~v~R~g~ 94 (101)
T 1uez_A 35 VGIYVSLVEPGSLAEKEGL-RVGDQILRVNDKSLARVTHAEAVKALKG-SKKLVLSVYSAGR 94 (101)
T ss_dssp CCEEEEEECTTSHHHHHTC-CSSCCEEEETTEECSSCCHHHHHHHSSS-SSSCCEEECCCCC
T ss_pred CCEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCcCHHHHHHhhcC-CCeEEEEEEECCc
Confidence 3799999999999999996 9999999999999999888887777753 4578888877643
No 151
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.82 E-value=1.4e-08 Score=76.56 Aligned_cols=60 Identities=28% Similarity=0.343 Sum_probs=52.9
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
|++|..|.+++||+ +|+ ++||+|++|||+++.+..+.+...+++..+..+.|+|.+.++.
T Consensus 40 gv~V~~V~~~spA~-agl-~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 40 SIVISDVLKGGPAE-GQL-QENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp CEEEEEECTTSTTB-TTB-CTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEESCC
T ss_pred CEEEEEECCCCchh-hCC-CCCCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEECCCC
Confidence 89999999999999 887 9999999999999998888888888876666899999876543
No 152
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.81 E-value=1.5e-08 Score=79.56 Aligned_cols=57 Identities=23% Similarity=0.375 Sum_probs=51.2
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHh---CCCcEEEEEec
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVA---NSSNLIITVKP 60 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKs---ssg~VtLtV~p 60 (241)
+.+|..|.+++||+++|+ ++||+|++|||+++...++++++.+++. .+..|.|+|+.
T Consensus 40 ~~~I~~V~~gSpA~~AGL-~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~~ 99 (101)
T 3qik_A 40 AVVVKSVQRGSLAEVAGL-QVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVAT 99 (101)
T ss_dssp EEEEEEECTTSHHHHHTC-CTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEEECCCCHHHHcCC-CCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEec
Confidence 578999999999999998 9999999999999977899999999987 35678888874
No 153
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.81 E-value=7.5e-09 Score=81.12 Aligned_cols=56 Identities=23% Similarity=0.402 Sum_probs=50.3
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~ 61 (241)
|++|..|.+++||+++|| ++||+|++|||+++..++++++.++++.. .+.|+|.+.
T Consensus 45 gv~V~~V~~~spA~~aGL-~~GD~Il~Ing~~v~~~~~~~~~~~l~~~--~v~l~v~R~ 100 (114)
T 2d8i_A 45 RLYVNSVKETGLASKKGL-KAGDEILEINNRAADALNSSMLKDFLSQP--SLGLLVRTY 100 (114)
T ss_dssp EEEEEECCTTSSHHHHTC-CTTCCEEEESSCBGGGCCHHHHHHHHTSS--EEEEEEEEC
T ss_pred CEEEEEeCCCCHHHHcCC-CCCCEEEEECCEECCCcCHHHHHHHHhCC--cEEEEEEEC
Confidence 689999999999999996 99999999999999988899999999743 778888764
No 154
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.81 E-value=1.5e-08 Score=82.02 Aligned_cols=61 Identities=31% Similarity=0.484 Sum_probs=55.1
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
.|++|..|.+++||+++|.|+.||+|++|||+++.++++.++..+++..+..+.|+|.+..
T Consensus 35 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~ 95 (196)
T 3gsl_A 35 PSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRK 95 (196)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEEEC
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecC
Confidence 4799999999999999994499999999999999999999999999877778999997654
No 155
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.81 E-value=1.1e-08 Score=74.64 Aligned_cols=58 Identities=26% Similarity=0.343 Sum_probs=47.4
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~ 62 (241)
.|++|..+ +++||+ +|+ ++||+|++|||+++.+++++++.++++.. +..+.|+|.+.+
T Consensus 27 ~~~~v~~v-~~spA~-aGl-~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 86 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRS-RGL-KEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQT 86 (88)
T ss_dssp SSEEEEEC-CC--CC-TTC-CTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEEC
T ss_pred CcEEEEEe-cCChhH-hCC-CCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEeCC
Confidence 36788886 999999 897 99999999999999988899999999853 346888887654
No 156
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.81 E-value=4.1e-09 Score=79.81 Aligned_cols=62 Identities=26% Similarity=0.447 Sum_probs=54.9
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.++++.++..+++.....+.|+|.+..+
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~ 100 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPE 100 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSEEEEEEECCHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECcc
Confidence 47889999999999999933999999999999999999999999998766678999987653
No 157
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.81 E-value=3.2e-09 Score=79.48 Aligned_cols=59 Identities=22% Similarity=0.295 Sum_probs=53.3
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
.+++|..|.+++||+ +|| ++||+|++|||+++.++++.+++.+++..+..+.|+|.+..
T Consensus 31 ~~~~V~~V~~~spA~-agL-~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 89 (96)
T 2edv_A 31 LPLTVVAVTAGGSAH-GKL-FPGDQILQMNNEPAEDLSWERAVDILREAEDSLSITVVRCT 89 (96)
T ss_dssp SSCBCCCBCSSSSST-TTS-CTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEEEEEEECC
T ss_pred CCeEEEEECCCCchh-hCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 368899999999996 887 99999999999999999999999999987778999998764
No 158
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.81 E-value=6.5e-09 Score=80.72 Aligned_cols=58 Identities=14% Similarity=0.183 Sum_probs=52.4
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCc-EEEEEecC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSN-LIITVKPA 61 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~-VtLtV~p~ 61 (241)
+++|..|.+++||+++|| +.||+|++|||+++.+++++++.++|+...+. +.|+|.+.
T Consensus 37 ~v~V~~V~~~spA~~aGL-~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~~ 95 (111)
T 1vae_A 37 PVQVHFLDPHCSASLAGA-KEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVSL 95 (111)
T ss_dssp SCEECCCCTTSSHHHHHC-CTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEECE
T ss_pred CEEEEEECCCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEec
Confidence 578999999999999997 99999999999999999999999999877664 88888764
No 159
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.79 E-value=1.7e-08 Score=76.14 Aligned_cols=63 Identities=16% Similarity=0.258 Sum_probs=54.5
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCcccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQRANMS 68 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q~~~~~ 68 (241)
.|++|..|.+++||++ |+ +.||+|++|||+++. +++++..++... +..+.|+|.+.++..++.
T Consensus 7 ~Gv~V~~V~~~spA~~-GL-~~GD~I~~Ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~ 71 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-VL-HAGDLITEIDGNAFK--SSQEFIDYIHSKKVGDTVKINYKHGDKNEQAD 71 (100)
T ss_dssp CCEEEEEECTTSGGGG-TC-CTTCEEEEETTBCCS--SHHHHHHHHHTSCTTCEEEEEEEETTEEEEEE
T ss_pred CCEEEEEeCCCCchHH-CC-CCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECCEEEEEE
Confidence 5899999999999996 87 999999999999998 899999999864 346899999988766554
No 160
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.78 E-value=6.7e-09 Score=89.90 Aligned_cols=63 Identities=30% Similarity=0.539 Sum_probs=55.4
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcE-EEEEecCCccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNL-IITVKPANQRA 65 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~V-tLtV~p~~q~~ 65 (241)
.|++|..|.+++||+++|| +.||+|++|||++|.++++++++.+|+..+..+ .|+|.+.++..
T Consensus 33 ~gv~V~~V~~gSpA~~aGL-~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v~~l~V~R~g~~~ 96 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGL-RAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDEF 96 (216)
T ss_dssp CSCBEEEECTTSHHHHHTC-CTTCBCCEETTEECTTCCTHHHHHHHHHHCSEEEEEECCHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEEEEEECCEEE
Confidence 3799999999999999996 999999999999999999999999998775567 77887766554
No 161
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.76 E-value=2.9e-09 Score=80.03 Aligned_cols=66 Identities=15% Similarity=0.346 Sum_probs=56.4
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCccccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQRANMSVPR 71 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q~~~~~~~R 71 (241)
.|++|..|.+++||++ |+ ++||+|++|||+++. +++++..+|+.. +..+.|+|.+.++..++.+..
T Consensus 1 ~Gv~V~~V~~~spA~~-GL-~~GD~I~~InG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 68 (91)
T 2kjp_A 1 NGIYASSVVENMPAKG-KI-EVGDKIISADGKNYQ--SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTL 68 (91)
T ss_dssp CCSSCCCCCCSSCCSS-CC-CSSCEEEEETTBCCS--SHHHHHHHHSSCCSSCEECEEEESSSCEECCCEEC
T ss_pred CceEEEEECCCChHHH-cC-CCCCEEEEECCEECC--CHHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEE
Confidence 3788999999999999 96 999999999999998 789999999765 346899999988877665543
No 162
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.76 E-value=3.3e-08 Score=74.22 Aligned_cols=59 Identities=19% Similarity=0.249 Sum_probs=51.4
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC--CcEEEEEecCCcc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANS--SNLIITVKPANQR 64 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsss--g~VtLtV~p~~q~ 64 (241)
|++|..|.++ |+++|| ++||+|++|||+++.+++|++++++|+... ..+.|+|.+.++.
T Consensus 33 Gv~V~~v~~~--a~~aGL-~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~~ 93 (96)
T 1ujv_A 33 GQRVKQILDI--QGCPGL-CEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGSGP 93 (96)
T ss_dssp EEEEEEESCG--GGSTTC-CSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECCSSC
T ss_pred CEEEEEEecc--cccCCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCCC
Confidence 7899999983 788887 999999999999999999999999999853 4789999887553
No 163
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.75 E-value=3.5e-08 Score=75.24 Aligned_cols=65 Identities=20% Similarity=0.450 Sum_probs=56.6
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANMSVP 70 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~~~~ 70 (241)
.|++|..|.+++||+++|+ +.||+|++|||+++. ++.++..+++ .+..+.|+|.+.++...+.+.
T Consensus 35 ~gv~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~--~~~~~~~~l~-~g~~v~l~v~R~g~~~~~~v~ 99 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGGI-QDGDIIVKVNGRPLV--DSSELQEAVL-TESPLLLEVRRGNDDLLFSIA 99 (112)
T ss_dssp SSEEEEEECTTSHHHHHTC-CTTCEEEEETTEECC--SHHHHHHHHH-HCSSEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEECCCChHHHCCC-CCCCEEEEECCEECC--CHHHHHHHHh-CCCeEEEEEEECCEEEEEEEE
Confidence 4799999999999999997 999999999999998 7899999885 455789999988877666544
No 164
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.74 E-value=2.5e-08 Score=82.47 Aligned_cols=62 Identities=19% Similarity=0.364 Sum_probs=55.1
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQR 64 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~ 64 (241)
|++|..|.+++||+++|.|++||+|++|||+++.+++++++.++|+.....+.|+|.+.++.
T Consensus 136 g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 197 (200)
T 2qt5_A 136 PVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEATLLIEYDVSV 197 (200)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEEEEEEC
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCcc
Confidence 78999999999999999349999999999999999999999999998555789999876543
No 165
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.74 E-value=4.6e-08 Score=79.18 Aligned_cols=68 Identities=24% Similarity=0.378 Sum_probs=56.5
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC-cEEEEEecCCcccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSS-NLIITVKPANQRANMSVP 70 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg-~VtLtV~p~~q~~~~~~~ 70 (241)
.|++|..|.+++||+++|+ +.||+|++|||+++.+.+++.+..+++...+ .+.|+|.+..+..++.+.
T Consensus 27 ~g~~V~~v~~~spA~~aGl-~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~vr~~~~~~~v~l~ 95 (166)
T 1w9e_A 27 NGIFVQLVQANSPASLVGL-RFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDRPFERTITMH 95 (166)
T ss_dssp TEEEEEEECTTSHHHHTTC-CTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECCTTCEEEEEE
T ss_pred CCEEEEEECCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEcCCCcEEEEEe
Confidence 4789999999999999996 9999999999999998877677788876665 788999665466556554
No 166
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.73 E-value=1.3e-08 Score=76.24 Aligned_cols=65 Identities=12% Similarity=0.308 Sum_probs=56.4
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCcccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQRANMSVP 70 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q~~~~~~~ 70 (241)
.|++|..|.+++||++ |+ ++||+|++|||+++. +++++..+++.. +..+.|+|.+.++..++.+.
T Consensus 5 ~Gv~V~~V~~~spA~~-GL-~~GD~Il~InG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 71 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-RL-EAGDRIAAIDGQPIN--TSEQIVSYVREKQAGDRVRVTFIRDRKQHEAELV 71 (94)
T ss_dssp CCEECCCCCTTSTTBT-TB-CTTCEEEEETTBCCC--CHHHHHHHHHHSCTTCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEECCCChHHh-CC-CCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEE
Confidence 5899999999999999 86 999999999999998 789999999875 34799999998887766543
No 167
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.73 E-value=3.5e-08 Score=78.52 Aligned_cols=64 Identities=16% Similarity=0.209 Sum_probs=55.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQRANMSV 69 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q~~~~~~ 69 (241)
.|++|..|.+++||+ +|+ +.||+|++|||+++. +++++..++... +..+.|+|.+.++..++.+
T Consensus 57 ~g~~V~~V~~~spA~-aGL-~~GD~I~~inG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 122 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GHL-EKYDVITKVDDKEIA--SSTDLQSALYNHSIGDTIKITYYRNGKEETTSI 122 (134)
T ss_dssp SCEEEEECSTTSGGG-TTS-CSSCEEEEETTEECC--CHHHHHHHHHHSSTTCEEEEEEEETTEEEEEEE
T ss_pred CCEEEEEECCCCchH-HCC-CCCCEEEEECCEEcC--CHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEE
Confidence 478999999999999 997 999999999999998 789999999775 3478999999888766654
No 168
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.73 E-value=2.6e-08 Score=72.84 Aligned_cols=64 Identities=14% Similarity=0.299 Sum_probs=54.6
Q ss_pred EEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC-cEEEEEecCCcccccccc
Q psy16075 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSS-NLIITVKPANQRANMSVP 70 (241)
Q Consensus 4 IfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg-~VtLtV~p~~q~~~~~~~ 70 (241)
++|..|.+++||+++|+ +.||+|++|||+++. +++++..+++...+ .+.++|.+.++..++.+.
T Consensus 6 ~~V~~v~~~spA~~aGl-~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~g~~~~~~v~ 70 (91)
T 2zpm_A 6 PVLENVQPNSAASXAGL-QAGDRIVXVDGQPLT--QWVTFVMLVRDNPGXSLALEIERQGSPLSLTLI 70 (91)
T ss_dssp CBCSEECTTSHHHHTTC-CTTCEEEEETTEECC--CHHHHHHHHHHCTTCCEEEEEEETTEEEEEEEC
T ss_pred eEEEEECCCChHHhcCC-CCCCEEEEECCeEcC--CHHHHHHHHhcCCCCeEEEEEEECCeEEEEEEE
Confidence 56889999999999997 999999999999998 89999999986543 689999988876665543
No 169
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.71 E-value=4.7e-08 Score=77.56 Aligned_cols=62 Identities=13% Similarity=0.113 Sum_probs=51.3
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC--CcEEEEEecCCccccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANS--SNLIITVKPANQRANM 67 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsss--g~VtLtV~p~~q~~~~ 67 (241)
|.+|.+|.+ +|+.+|| ++||+|++|||++|.+++|+|++++|+... ..|.|+|.+.+....+
T Consensus 35 g~~V~~I~~--~~~~aGL-~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~~~p~ 98 (113)
T 3soe_A 35 GQKVKMILD--SQWCQGL-QKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGGPPSPT 98 (113)
T ss_dssp EEEEEEESC--GGGSTTC-CTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESSCC---
T ss_pred CcEEEEecC--hHHhCCC-CCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCccCcc
Confidence 567889988 5778887 999999999999999999999999999763 3699999988765443
No 170
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.71 E-value=3.9e-08 Score=81.43 Aligned_cols=64 Identities=20% Similarity=0.375 Sum_probs=55.7
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC--CcEEEEEecCCccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANS--SNLIITVKPANQRA 65 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsss--g~VtLtV~p~~q~~ 65 (241)
.+++|..|.+++||+++|.|+.||+|++|||+++.+++++++..+|+... ..+.|+|.+.++..
T Consensus 36 ~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~ 101 (196)
T 1p1d_A 36 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAES 101 (196)
T ss_dssp CSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEECSCSC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecCCCC
Confidence 36899999999999999934999999999999999889999999998774 46899998776543
No 171
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.70 E-value=6.1e-08 Score=72.90 Aligned_cols=57 Identities=23% Similarity=0.307 Sum_probs=50.2
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC--cEEEEEecCC
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSS--NLIITVKPAN 62 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg--~VtLtV~p~~ 62 (241)
.-+|..|.+++||+++|+ +.||+|++|||+++. +++++...|....+ .+.++|.+.+
T Consensus 3 ~p~V~~V~~~spA~~aGl-~~GD~I~~ing~~v~--~~~d~~~~l~~~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 3 RPVVGEIAANSIAAEAQI-APGTELKAVDGIETP--DWDAVRLQLVDKIGDESTTITVAPFG 61 (95)
T ss_dssp CCBEEEECTTSHHHHTTC-CTTCEEEEETTEECS--SHHHHHHHHHHTTTCSEEEEEEECTT
T ss_pred CCEEEeeCCCCHHHHcCC-CCCCEEEEECCEECC--CHHHHHHHHHHhcCCCcEEEEEEECC
Confidence 347899999999999998 999999999999999 89999999976543 6889998876
No 172
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.70 E-value=3.2e-08 Score=72.79 Aligned_cols=63 Identities=21% Similarity=0.253 Sum_probs=52.4
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCcccccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQRANMS 68 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q~~~~~ 68 (241)
|+.|..+.+++||+++|+ +.||+|++|||+++. ++.++..++... +..+.++|.+.++...+.
T Consensus 20 G~~V~~~~~~s~A~~aGl-~~GD~I~~ing~~v~--~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~ 84 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIGL-QDGDMAVALNGLDLT--DPNVMNTLFQSMNEMTEMSLTVERDGQQHDVY 84 (87)
T ss_dssp EEEEEECSCHHHHHHTTC-CTTCEEEEETTEETT--CHHHHHHHHHTGGGCSEEEEEEEETTEEEEEE
T ss_pred EEEEEeCCCCCHHHHCCC-CCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 667788888888899997 999999999999998 899999988754 346889999887765443
No 173
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.70 E-value=4.3e-08 Score=81.04 Aligned_cols=59 Identities=25% Similarity=0.340 Sum_probs=53.5
Q ss_pred cEEEEEEcCCCHHhhh-CCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 3 GIFISRLVPGGLAEST-GLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 3 GIfIs~VvpGSpAerA-GLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
|++|..|.+++||+++ |+ +.||+|++|||+++.++++.++..+++..+..+.|+|.+..
T Consensus 34 ~~~V~~v~~~spA~~aggl-~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 93 (200)
T 2qt5_A 34 KPRVSNLRQGGIAARSDQL-DVGDYIKAVNGINLAKFRHDEIISLLKNVGERVVLEVEYEL 93 (200)
T ss_dssp CSEEEEECTTSHHHHTTSC-CTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEEC
T ss_pred CeEEEEECCCChHHhcCCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEeccC
Confidence 6899999999999999 76 99999999999999999999999999877778999997653
No 174
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.15 E-value=1.9e-09 Score=83.79 Aligned_cols=56 Identities=27% Similarity=0.455 Sum_probs=50.3
Q ss_pred cEEEEEEcCCCHHhh-hCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEe
Q psy16075 3 GIFISRLVPGGLAES-TGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59 (241)
Q Consensus 3 GIfIs~VvpGSpAer-AGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~ 59 (241)
|++|..|.++|||++ +|| ++||+|++|||+++.++++++++.+++..++.+.|+|.
T Consensus 54 gv~V~~V~~~spA~~~aGL-~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~l~V~ 110 (112)
T 2lob_A 54 PILISEIHPGQPADRCGGL-HVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVV 110 (112)
Confidence 689999999999999 787 99999999999999888999999999877666777664
No 175
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.65 E-value=7e-08 Score=79.88 Aligned_cols=61 Identities=18% Similarity=0.374 Sum_probs=54.4
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
.|++|..|.+++||+++|.|++||+|++|||+++.+++++++.++|+..+..+.|+|.+.+
T Consensus 135 ~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 195 (196)
T 1p1d_A 135 DPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVKLKIRKDE 195 (196)
T ss_dssp CCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTCEEEEEECCC
T ss_pred CCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeCC
Confidence 3789999999999999993399999999999999987899999999888667999998754
No 176
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.56 E-value=1.2e-07 Score=72.00 Aligned_cols=63 Identities=21% Similarity=0.253 Sum_probs=50.7
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCcccccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQRANMS 68 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q~~~~~ 68 (241)
|+.|....++++|+++|+ +.||+|++|||+++. ++.++..++... +..+.|+|.+.++...+.
T Consensus 38 G~~V~~~~pas~A~~aGl-~~GDvI~~ing~~v~--~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~ 102 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIGL-QDGDMAVALNGLDLT--DPNVMNTLFQSMNEMTEMSLTVERDGQQHDVY 102 (105)
T ss_dssp EEEEEECSCTHHHHHHTC-CTTCEEEEETTEETT--STTHHHHHHHHHTTCSEEEEEEEETTEEEEEE
T ss_pred EEEEecCCCCCHHHHcCC-CCCCEEEEECCEECC--CHHHHHHHHHhcCCCCeEEEEEEECCEEEEEE
Confidence 556677777778899997 999999999999998 778888888652 346899999888765543
No 177
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.55 E-value=4.5e-08 Score=90.51 Aligned_cols=68 Identities=16% Similarity=0.434 Sum_probs=55.9
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC--cEEEEEecCCccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSS--NLIITVKPANQRANMSV 69 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg--~VtLtV~p~~q~~~~~~ 69 (241)
+|++|..|.++|||+++|.|++||+|++|||+++.++++++++.+++.... .+.|+|.+.....++.+
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~~~~v~l 301 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTTVLI 301 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECCSCC----
T ss_pred CCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCccccccccccccceeeE
Confidence 468999999999999999449999999999999999999999999987633 48999988766555443
No 178
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.51 E-value=2.3e-07 Score=84.50 Aligned_cols=65 Identities=17% Similarity=0.377 Sum_probs=57.4
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQRANMSV 69 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q~~~~~~ 69 (241)
.|++|..|.+++||+++|| +.||+|++|||++|. ++.++..++... +..+.|+|.|.++..++.+
T Consensus 263 ~G~~V~~V~~~spA~~aGL-~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 329 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAGV-KAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNGKPLEVEV 329 (345)
T ss_dssp SSEEEEEECTTSHHHHHTC-CTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEE
T ss_pred ceEEEEEeccCChHHHcCC-CCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEE
Confidence 4899999999999999998 999999999999999 899999999764 3469999999988776653
No 179
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.49 E-value=2e-07 Score=92.19 Aligned_cols=61 Identities=31% Similarity=0.484 Sum_probs=55.6
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~ 62 (241)
.|++|..|.+|+||+++|.|+.||+|++|||+++.+++|.+++.+|+..+..|.|+|.+.+
T Consensus 89 ~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 149 (721)
T 2xkx_A 89 PSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRK 149 (721)
T ss_pred CCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhccccccceEEEecc
Confidence 4799999999999999995599999999999999999999999999877778999998765
No 180
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.48 E-value=3.6e-07 Score=83.88 Aligned_cols=70 Identities=23% Similarity=0.458 Sum_probs=59.9
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC-cEEEEEecCCc---ccccccccC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSS-NLIITVKPANQ---RANMSVPRR 72 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg-~VtLtV~p~~q---~~~~~~~R~ 72 (241)
.+++|..|.+++||+++|+ ++||+|++|||+++.++..+++..+|+...+ .|.|+|.+.++ ..++++.|.
T Consensus 99 ~~~~V~~v~~~spA~~aGl-~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~~~~~~~~~l~r~ 172 (388)
T 1fc6_A 99 KDVVVLTPAPGGPAEKAGA-RAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGAPSNTRTLQLTRQ 172 (388)
T ss_dssp SCEEEEEECTTSHHHHTTC-CTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTEEEEEEEEEEECB
T ss_pred CcEEEEEeCCCChHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCCCcceEEEEEEEc
Confidence 3689999999999999997 9999999999999998888999999976554 58999998876 566666654
No 181
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.47 E-value=3e-07 Score=81.94 Aligned_cols=65 Identities=23% Similarity=0.376 Sum_probs=56.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQRANMSV 69 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q~~~~~~ 69 (241)
.|++|..|.+++||+++|| +.||+|++|||+++. ++.++..+|+.. +..+.|+|.|.++..++.+
T Consensus 244 ~g~~V~~V~~~spA~~aGL-~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 310 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAGI-QVNDLIISVDNKPAI--SALETMDQVAEIRPGSVIPVVVMRDDKQLTLQV 310 (318)
T ss_dssp CCEEEEEECTTSTTTTTCC-CTTCCEEEETTEECC--CHHHHHHHHHTSCTTCEEEEEEESSSCEEEEEE
T ss_pred CcEEEEEeCCCChHHHCCC-CCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEE
Confidence 4899999999999999998 999999999999998 789999999863 3469999999887766643
No 182
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.46 E-value=4.5e-07 Score=81.38 Aligned_cols=65 Identities=20% Similarity=0.412 Sum_probs=57.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANMSVP 70 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~~~~ 70 (241)
.|++|..|.+++||+++|| +.||+|++|||+++. +++++..+++. ...+.|+|.|.++...+.+.
T Consensus 256 ~gv~V~~V~~~spA~~aGl-~~GDvI~~ing~~v~--~~~~l~~~l~~-~~~v~l~v~R~g~~~~~~v~ 320 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAGL-RPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQLAVQIRRGRETLTLYVT 320 (325)
T ss_dssp SCEEEEEECTTSHHHHHTC-CTTCEEEEETTEECC--SHHHHHHHHTT-CSSEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEeCcCChHHHCCC-CCCCEEEEECCEEcC--CHHHHHHHHhC-CCeEEEEEEECCEEEEEEEE
Confidence 3899999999999999998 999999999999998 89999999975 46899999999887776543
No 183
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.43 E-value=5e-07 Score=84.50 Aligned_cols=63 Identities=24% Similarity=0.377 Sum_probs=57.3
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANMS 68 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~~ 68 (241)
|++|..|.+++||+++|| +.||+|++|||+++. +++++.++|+...+.+.|+|.+.++...+.
T Consensus 364 gv~V~~V~~~spA~~aGL-~~GD~I~~vng~~v~--~~~~~~~~l~~~~~~v~l~v~R~g~~~~~~ 426 (436)
T 4a8c_A 364 GIKIDEVVKGSPAAQAGL-QKDDVIIGVNRDRVN--SIAEMRKVLAAKPAIIALQIVRGNESIYLL 426 (436)
T ss_pred CEEEEEeCCCCHHHHcCC-CCCCEEEEECCEECC--CHHHHHHHHHhCCCeEEEEEEECCEEEEEE
Confidence 799999999999999997 999999999999998 899999999886678999999988776654
No 184
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.40 E-value=8.3e-07 Score=70.46 Aligned_cols=61 Identities=20% Similarity=0.291 Sum_probs=51.7
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCcccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQRANMS 68 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q~~~~~ 68 (241)
.|++|..|.+++||+++ + +.||+|++|||+++. +++++..+++.. +..+.|+| +.++ ..++
T Consensus 25 ~gv~V~~V~~~spA~~a-L-~~GD~Il~InG~~v~--~~~dl~~~l~~~~~g~~v~l~V-R~g~-~~v~ 87 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV-L-TPGLVIESINGMPTS--NLTTYSAALKTISVGEVINITT-DQGT-FHLK 87 (125)
T ss_dssp CCEEEEEECSSSGGGGT-S-CTTCEEEEETTEECS--SHHHHHHHHTTCCTTCEEEEEE-TTEE-EEEE
T ss_pred CceEEEEECCCChHHHh-c-CCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEE-ECCE-EEEE
Confidence 48999999999999999 5 999999999999998 899999999742 34688999 8776 5444
No 185
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.39 E-value=7.3e-07 Score=79.37 Aligned_cols=64 Identities=19% Similarity=0.281 Sum_probs=55.2
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEec-CCcccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKP-ANQRANMS 68 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p-~~q~~~~~ 68 (241)
.|++|..|.+++||+++|| +.||+|++|||+++. ++.++..++... +..+.|+|.| .++..++.
T Consensus 242 ~g~~V~~v~~~spA~~aGl-~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~~g~~~~~~ 308 (324)
T 1y8t_A 242 LGAKIVEVVAGGAAANAGV-PKGVVVTKVDDRPIN--SADALVAAVRSKAPGATVALTFQDPSGGSRTVQ 308 (324)
T ss_dssp SSEEEEEECTTSTTTTTTC-CTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEEEEEECSSCCEEEEE
T ss_pred CceEEEEECCCChHHHcCC-CCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCCCEEEEE
Confidence 4789999999999999997 999999999999999 889999999753 3468999998 77765554
No 186
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.36 E-value=7.6e-07 Score=83.92 Aligned_cols=63 Identities=11% Similarity=0.181 Sum_probs=56.5
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANMS 68 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~~ 68 (241)
|++|..|.+++||+++|| ++||+|++|||+++. +++++.++++.....+.|+|.+.++...+.
T Consensus 387 Gv~V~~V~~gspA~~aGL-~~GD~I~~Vng~~v~--~~~~~~~~l~~~~~~v~l~v~R~g~~~~v~ 449 (451)
T 3pv2_A 387 GVQVVGASENSAGWRAGI-RPGDIIISANKKPVT--DVKSLQTIAQEKKKELLVQVLRGPGSMYLL 449 (451)
T ss_dssp EEEEEEECTTSHHHHHTC-CTTCEEEEETTEECC--SHHHHHHHTTSSCSCEEEEEEETTEEEEEE
T ss_pred ceEEEEECCCCHHHHcCC-CCCCEEEEECCEECC--CHHHHHHHHhcCCCeEEEEEEECCEEEEEE
Confidence 789999999999999997 999999999999998 899999999876667999999988776554
No 187
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.36 E-value=5.2e-07 Score=81.66 Aligned_cols=65 Identities=22% Similarity=0.377 Sum_probs=56.5
Q ss_pred CcEEEEEEcCCCHHhhhCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHHhCC--CcEEEEEecCCcccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAV-----------NDEVLEVNGILVAGKSLDQVTDMMVANS--SNLIITVKPANQRANMS 68 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqv-----------GD~ILeINGqsV~glshdeVv~LLKsss--g~VtLtV~p~~q~~~~~ 68 (241)
.|++|..|.+++||+++|+ +. ||+|++|||++|. +++++..+|.... ..+.|+|.|.++..++.
T Consensus 251 ~Gv~V~~V~~~spA~~AGl-~~~~~~~~~~l~~GDvI~~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~ 327 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGL-QSTKRDGYGRLVLGDIITSVNGTKVS--NGSDLYRILDQCKVGDEVTVEVLRGDHKEKIS 327 (348)
T ss_dssp SSEEEEECCSSSHHHHHTC-CCCEECSSSCEECCCEECEETTBCCS--SSHHHHHHHTTCCTTCEEEEEEECSSSEEEEE
T ss_pred ceEEEEEecCCChHHHcCC-ccccccccCCCCCCCEEEEECCEEeC--CHHHHHHHHHhCCCcCEEEEEEEECCEEEEEE
Confidence 5899999999999999998 88 9999999999999 7899999996543 46999999998876654
Q ss_pred c
Q psy16075 69 V 69 (241)
Q Consensus 69 ~ 69 (241)
+
T Consensus 328 v 328 (348)
T 3qo6_A 328 V 328 (348)
T ss_dssp E
T ss_pred E
Confidence 3
No 188
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.30 E-value=1.9e-06 Score=72.71 Aligned_cols=58 Identities=17% Similarity=0.305 Sum_probs=45.8
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCC-CEEEEECCEEcCCCCHHHHH-HHHHhC-CCcEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVN-DEVLEVNGILVAGKSLDQVT-DMMVAN-SSNLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvG-D~ILeINGqsV~glshdeVv-~LLKss-sg~VtLtV~p~~ 62 (241)
.|++|..|.++|||+++|+ +.| |+|++|||+++... .++. .+++.. +..+.|+|.+..
T Consensus 16 ~G~~V~~V~~~SpA~~AGL-~~G~D~I~~ing~~v~~~--~~~~~~~~~~~~g~~v~l~v~R~~ 76 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAGL-EPFFDFIVSINGSRLNKD--NDTLKDLLKANVEKPVKMLIYSSK 76 (209)
T ss_dssp EEEEEEEECTTSHHHHTTC-CTTTEEEEEETTEECCSS--SSHHHHHHHHTTTSCEEEEEEETT
T ss_pred CEEEEEEECCCCHHHHCCC-CcCCeEEEEECCEECcCH--HHHHHHHHhcCCCCEEEEEEEecC
Confidence 3799999999999999997 998 99999999999844 3333 344433 347999998754
No 189
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.30 E-value=1.7e-06 Score=81.58 Aligned_cols=64 Identities=25% Similarity=0.361 Sum_probs=56.2
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCcccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQRANMS 68 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q~~~~~ 68 (241)
.|++|..|.+++||+++|| +.||+|++|||++|. ++.++..++... +..+.|+|.+.++..++.
T Consensus 282 ~G~~V~~V~~~spA~~aGL-~~GDvI~~vnG~~v~--~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~~~ 347 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAGL-KAGDIITQINDTKIT--QATQVKTTISLLRVGSTVKIIVERDNKPLTLS 347 (451)
T ss_dssp CCEEEEEECTTSHHHHHTC-CTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEEEEEEETTEEEEEE
T ss_pred ceEEEEecCCCChHHHcCC-CCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 5899999999999999997 999999999999999 889999999753 346899999988876654
No 190
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.30 E-value=1.5e-06 Score=81.21 Aligned_cols=65 Identities=17% Similarity=0.377 Sum_probs=56.3
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQRANMSV 69 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q~~~~~~ 69 (241)
.|++|..|.+++||+++|| +.||+|++|||+++. ++.++..++... +..+.|+|.+.++..++.+
T Consensus 263 ~G~~V~~V~~~spA~~aGL-~~GD~I~~vnG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 329 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAGV-KAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNGKPLEVEV 329 (436)
T ss_pred cceEEEEECCCChHHHCCC-CCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEE
Confidence 4899999999999999997 999999999999999 788999888754 3469999999887766643
No 191
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.22 E-value=1.6e-06 Score=73.22 Aligned_cols=57 Identities=11% Similarity=0.179 Sum_probs=49.6
Q ss_pred CcEEEEEEcCCCHHhhhCCCCC-CCEEEEECCEEcCCCCHHHHHHHHHhCCC-cEEEEEecCC
Q psy16075 2 PGIFISRLVPGGLAESTGLLAV-NDEVLEVNGILVAGKSLDQVTDMMVANSS-NLIITVKPAN 62 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqv-GD~ILeINGqsV~glshdeVv~LLKsssg-~VtLtV~p~~ 62 (241)
.|++|..|.+++||+++|+ +. ||+|++|||+ +. +++++.++++...+ .+.|+|.+.+
T Consensus 112 ~Gv~V~~V~~~spA~~aGl-~~~GD~I~~ing~-v~--~~~~l~~~l~~~~g~~v~l~v~r~~ 170 (209)
T 3rle_A 112 NVWHVLEVESNSPAALAGL-RPHSDYIIGADTV-MN--ESEDLFSLIETHEAKPLKLYVYNTD 170 (209)
T ss_dssp SCEEEEEECTTSHHHHHTC-CTTTEEEEEESSC-CC--SSSCHHHHHHHTTTSCEEEEEEETT
T ss_pred cceEEEEeCCCChHHHCCC-CCCCCEEEECCCE-eC--CHHHHHHHHHhCCCCeEEEEEEECC
Confidence 4789999999999999997 99 9999999998 76 78899999987644 6899997754
No 192
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.19 E-value=2e-07 Score=86.21 Aligned_cols=61 Identities=23% Similarity=0.424 Sum_probs=0.0
Q ss_pred EEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccc
Q psy16075 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRA 65 (241)
Q Consensus 4 IfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~ 65 (241)
.+|..|.++++|+++|| ++||+|++|||++|.+.++++++++|+...+.+.|+|.+.....
T Consensus 317 g~I~~V~~gs~A~~aGL-~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p~~~~~ 377 (388)
T 3suz_A 317 GIICSLMRGGIAERGGV-RVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPAAMFR 377 (388)
T ss_dssp --------------------------------------------------------------
T ss_pred CEEEEeecCCHHHHcCC-CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 37889999999999995 99999999999999999999999999988788999998765443
No 193
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.18 E-value=2.2e-07 Score=83.38 Aligned_cols=64 Identities=31% Similarity=0.524 Sum_probs=0.0
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANMSV 69 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~~~ 69 (241)
.|++|..|.+++||+++|| +.||+|++|||+++. +++++..+++. +..+.|+|.|.++..++.+
T Consensus 254 ~g~~V~~v~~~spA~~aGl-~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~v~l~v~R~g~~~~~~v 317 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGGL-KENDVIISINGQSVV--SANDVSDVIKR-ESTLNMVVRRGNEDIMITV 317 (332)
T ss_dssp --------------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcCC-CCCCEEEEECCEECC--CHHHHHHHHhC-CCeEEEEEEECCEEEEEEE
Confidence 3789999999999999997 999999999999998 78899999874 5578999998887766543
No 194
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.12 E-value=9.8e-06 Score=65.38 Aligned_cols=55 Identities=27% Similarity=0.434 Sum_probs=49.1
Q ss_pred EEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEec
Q psy16075 5 FISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60 (241)
Q Consensus 5 fIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p 60 (241)
+|..+.+++||+++|+ +.||.|++|||+++....++++...++..+..+.+.|.+
T Consensus 110 ~v~~v~~~s~a~~aGl-~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~~ 164 (166)
T 1w9e_A 110 KITSIVKDSSAARNGL-LTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP 164 (166)
T ss_dssp EEEEECTTSHHHHTTC-CSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred EEEEEccCCHHHHcCC-CCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEEEE
Confidence 7889999999999996 999999999999999999999988887777777777765
No 195
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.07 E-value=4.4e-06 Score=81.75 Aligned_cols=64 Identities=11% Similarity=0.230 Sum_probs=53.3
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCcccccccc
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQRANMSVP 70 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q~~~~~~~ 70 (241)
|++|..|.++|||+++|+ ++||+|++|||++|. .+++.++|+.. +..|.|+|.+.++..++.+.
T Consensus 497 gv~V~~V~~~spA~~AGL-~~GD~I~aInG~~v~---~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 562 (597)
T 4fgm_A 497 GLDVLNVYHDESAYHAGL-SAGDKIIAIDHLQAT---EQSVKRILERYIPGDTVTIHAFRRDELMTLELT 562 (597)
T ss_dssp EEEEEEECTTSHHHHHTC-CTTCEEEEETTEECC---TTTHHHHHTTCCTTCEEEEEEEETTEEEEEEEE
T ss_pred eEEEEEeCCCChHHHCCC-CCCCEEEEECCEECC---HHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEE
Confidence 689999999999999998 999999999999995 45666777643 34699999999887776543
No 196
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.93 E-value=6.6e-06 Score=77.15 Aligned_cols=56 Identities=27% Similarity=0.379 Sum_probs=46.7
Q ss_pred EEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q psy16075 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63 (241)
Q Consensus 4 IfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q 63 (241)
++|..|.+++||+++|+ +.||+|++|||++|.+.. +..+++..+..|.|+|.+.++
T Consensus 92 ~~V~~V~~gsPA~~AGL-~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 92 ALISYVVPGSPAEEAGL-QRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVV 147 (403)
T ss_dssp EEEEEECTTSHHHHTTC-CTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC
T ss_pred EEEEEeCCCChHHHcCC-CCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCc
Confidence 78999999999999997 999999999999999664 666777633368888887654
No 197
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.93 E-value=1.3e-06 Score=82.39 Aligned_cols=64 Identities=16% Similarity=0.321 Sum_probs=0.0
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEEecCCcccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANMS 68 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~VtLtV~p~~q~~~~~ 68 (241)
.|++|..|.+++||+++|+ +.||+|++|||+++. +++++.++|+...+.+.|+|.+.++...+.
T Consensus 383 ~gv~V~~V~~gspA~~aGL-~~GDiI~~vng~~v~--~~~~l~~~l~~~~~~v~l~v~R~g~~~~~~ 446 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIGL-KKGDVIIGANQQAVK--NIAELRKVLDSKPSVLALNIQRGDSTIYLL 446 (448)
T ss_dssp -------------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcCC-CCCCEEEEECCEECC--CHHHHHHHHHcCCCeEEEEEEECCEEEEEE
Confidence 3688999999999999997 999999999999998 789999999876667888998887765543
No 198
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.89 E-value=3.6e-06 Score=79.26 Aligned_cols=66 Identities=20% Similarity=0.389 Sum_probs=56.1
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEEecCCcccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVAN--SSNLIITVKPANQRANMSVP 70 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKss--sg~VtLtV~p~~q~~~~~~~ 70 (241)
.|++|..|.+++||+++|| +.||+|++|||+++. ++.++..++... +..+.|+|.+.++..++.+.
T Consensus 286 ~G~~V~~V~~gspA~~AGL-~~GDvI~~inG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 353 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAGI-KAGDVITSLNGKPIS--SFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLE 353 (448)
T ss_dssp CSEECCCCTTCSSSTTTTC-CTTCEECBSSSSBCC--SSHHHHHHTTSSBTTCCCEEEEESSSCEEECCCC
T ss_pred CceEEEEeccCCHHHHcCC-CCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEE
Confidence 3899999999999999998 999999999999999 778998888643 45799999998877665543
No 199
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.64 E-value=8.2e-05 Score=74.12 Aligned_cols=65 Identities=9% Similarity=0.169 Sum_probs=52.8
Q ss_pred cEEEEEEcCC--------CHHhhhC--CCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC-cEEEEEecCC-cccccccc
Q psy16075 3 GIFISRLVPG--------GLAESTG--LLAVNDEVLEVNGILVAGKSLDQVTDMMVANSS-NLIITVKPAN-QRANMSVP 70 (241)
Q Consensus 3 GIfIs~VvpG--------SpAerAG--LLqvGD~ILeINGqsV~glshdeVv~LLKsssg-~VtLtV~p~~-q~~~~~~~ 70 (241)
+++|..|.++ +||+++| + + ||+|++|||+++.++. ++..+|++..+ .|.|+|.+.+ +..++.+.
T Consensus 749 ~~~v~~v~~~~~~~~~~~spa~~ag~~l-~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l~v~r~~~~~~~~~~~ 824 (1045)
T 1k32_A 749 HYVVAKAYAGDYSNEGEKSPIFEYGIDP-T-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARIRLSGKGGDKRDLMID 824 (1045)
T ss_dssp EEEEEEECBSCTTSTTCBCGGGGGTCCC-T-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEEEEECSSSCEEEEEEE
T ss_pred EEEEEEecCCCcccccCCChHHHCCCCc-C-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEEEEECCCCceEEEEEE
Confidence 6789999998 9999999 6 8 9999999999999654 88899987665 5899999876 34455554
Q ss_pred c
Q psy16075 71 R 71 (241)
Q Consensus 71 R 71 (241)
+
T Consensus 825 ~ 825 (1045)
T 1k32_A 825 I 825 (1045)
T ss_dssp C
T ss_pred E
Confidence 3
No 200
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.31 E-value=0.00028 Score=68.71 Aligned_cols=66 Identities=15% Similarity=0.228 Sum_probs=50.3
Q ss_pred CcEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCC--------HHHHHHHHHhC--CCcEEEEEecCCccccccc
Q psy16075 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKS--------LDQVTDMMVAN--SSNLIITVKPANQRANMSV 69 (241)
Q Consensus 2 pGIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~gls--------hdeVv~LLKss--sg~VtLtV~p~~q~~~~~~ 69 (241)
.|++|..|.+++||+++ | +.||.|++|||+.|.... ..++..++... +..|.|+|.|.+++.++.+
T Consensus 277 ~Gv~V~~V~~~spA~~a-l-~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~V 352 (539)
T 4fln_A 277 EGVLVRRVEPTSDASKV-L-KEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQV 352 (539)
T ss_dssp BCEEEEEECTTSGGGGT-C-CTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEE
T ss_pred CceeeecccCCChHHhC-c-cCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEE
Confidence 38999999999999875 5 999999999999996321 11234455433 4479999999998777754
No 201
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.70 E-value=0.0039 Score=60.76 Aligned_cols=54 Identities=15% Similarity=0.295 Sum_probs=48.3
Q ss_pred cEEEEEEcCCCHHhhhCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCc-EEEEEe
Q psy16075 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSN-LIITVK 59 (241)
Q Consensus 3 GIfIs~VvpGSpAerAGLLqvGD~ILeINGqsV~glshdeVv~LLKsssg~-VtLtV~ 59 (241)
|++|+.|.++++|...|+ +.||+|++|||++|. +..++.++|+++++. +.|.+.
T Consensus 416 gVvvs~V~~~s~a~~~g~-~~gdiI~~vNg~~V~--s~~~l~~~l~~~k~~~l~~~~~ 470 (539)
T 4fln_A 416 IVILSQVLANEVNIGYED-MNNQQVLKFNGIPIR--NIHHLAHLIDMCKDKYLVFEFE 470 (539)
T ss_dssp CEEEEEECCCGGGTTCSS-CCSEEEEEETTEECC--SHHHHHHHHHTCCSSEEEEEET
T ss_pred EEEEEEecCCchhhhcCC-CCCCEEEeECCEEcC--CHHHHHHHHHHcCCCeEEEEEC
Confidence 799999999999999998 899999999999999 999999999988775 555543
No 202
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=90.19 E-value=0.079 Score=47.48 Aligned_cols=45 Identities=18% Similarity=0.050 Sum_probs=31.7
Q ss_pred hhhhhcccccceeecccCCCCcccceeeeEEEEEeecccccchhccc
Q psy16075 104 DEVVDLTGITLEICRIEPSTNSDIFERTKIVFVFTMLSKTTKWMSDM 150 (241)
Q Consensus 104 ~~~~~~~~~~~~~~~~~p~t~s~~~~~~~i~~~~~~~~~~~~~~~~~ 150 (241)
-.|++++.+.-..++.+||- ...|.+++|+.+..+.+ .+|||+..
T Consensus 6 ~yvRa~fdY~~~~D~~~P~~-gL~F~~gDiL~V~~~~d-~~wWqA~~ 50 (292)
T 3tvt_A 6 LYVRALFDYDPNRDDGLPSR-GLPFKHGDILHVTNASD-DEWWQARR 50 (292)
T ss_dssp CEEEECSCBCC----------CCCBCTTCEEEEEECCS-SSEEEECC
T ss_pred EEEEEeccCCCCCCCCCCCC-cCCcCCCCEEEEeecCC-CCeEEEEE
Confidence 46788999888889999996 59999999999999987 79999975
No 203
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=85.71 E-value=0.31 Score=45.18 Aligned_cols=45 Identities=13% Similarity=0.131 Sum_probs=38.8
Q ss_pred hhhhcccccceeecccCC-CCcccceeeeEEEEEeecccccchhccc
Q psy16075 105 EVVDLTGITLEICRIEPS-TNSDIFERTKIVFVFTMLSKTTKWMSDM 150 (241)
Q Consensus 105 ~~~~~~~~~~~~~~~~p~-t~s~~~~~~~i~~~~~~~~~~~~~~~~~ 150 (241)
.|+++..+....++-+|| +....|.+++|+.+....+ .+||++..
T Consensus 40 ~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~~~~d-~~WWqar~ 85 (337)
T 4dey_A 40 AVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFN-NDWWIGRL 85 (337)
T ss_dssp EEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECS-SSEEEEEE
T ss_pred EEEEccccCCCCCCCCCcccccccccCCCEEEEEecCC-CCeEEEEE
Confidence 566777777888888899 7899999999999999876 89999987
No 204
>1wmh_B Partitioning defective-6 homolog alpha; kinase, PB1 domain, OPCA motif, APKC, cell polarity, transferase/cell cycle complex; 1.50A {Homo sapiens} SCOP: d.15.2.2
Probab=82.66 E-value=0.067 Score=40.88 Aligned_cols=32 Identities=28% Similarity=0.353 Sum_probs=26.6
Q ss_pred eeecccCCCCcccceeeeEEEEEeecccccchhcccccchhhhhhhhh
Q psy16075 115 EICRIEPSTNSDIFERTKIVFVFTMLSKTTKWMSDMNGHALRILARES 162 (241)
Q Consensus 115 ~~~~~~p~t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lrl~~~~~ 162 (241)
+.-|+.|++|+++|.++.. + +.|+|||++|++
T Consensus 55 ~dGDLlpInnDdnl~~Al~-------~---------a~plLRl~Iqrk 86 (86)
T 1wmh_B 55 AHGDLLPLTNDDSLHRALA-------S---------GPPPLRLLVQKR 86 (86)
T ss_dssp TTSCEEECCSHHHHHHHTT-------S---------SSSCEEEEEECC
T ss_pred CCCCEeeecCHHHHHHHHH-------h---------CCCcEEEEEEcC
Confidence 3578999999999998855 4 678999999874
No 205
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.87 E-value=3.4 Score=28.92 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=32.6
Q ss_pred hhhcccccceeecccCC-CCcccceeeeEEEEEeecccccchhccccc
Q psy16075 106 VVDLTGITLEICRIEPS-TNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 106 ~~~~~~~~~~~~~~~p~-t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
++++..+........|+ .++..|.+++++++....+...||+...++
T Consensus 10 ~~Al~dy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~g 57 (76)
T 2csi_A 10 MVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYYGELNG 57 (76)
T ss_dssp EECSSCCCTTTTSCSSSTTTSCCCCTTCEEEEESSCCSSSEEEEEETT
T ss_pred EEEcccCCCCCcccCCCCCCcccCCCCCEEEEeEecCCCCeEEEEECC
Confidence 44555555544445566 678899999999999876645699866543
No 206
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=53.42 E-value=3.7 Score=36.33 Aligned_cols=45 Identities=9% Similarity=-0.054 Sum_probs=34.2
Q ss_pred hhhcccccceeecccCCCCcccceeeeEEEEEeecccccchhccccc
Q psy16075 106 VVDLTGITLEICRIEPSTNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 106 ~~~~~~~~~~~~~~~p~t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
++++..+.....+-+| ..+..|.+++|+++....+ ..||++...+
T Consensus 4 vrAlydy~~~~~~~~p-~~eLsf~~GDil~V~~~~d-~~WW~a~~~~ 48 (295)
T 1kjw_A 4 IRALFDYDKTKDCGFL-SQALSFRFGDVLHVIDAGD-EEWWQARRVH 48 (295)
T ss_dssp EEESSCBCHHHHHCCC-SSBCCBCTTCEEEEEECCS-SSEEEEEECC
T ss_pred EEEeeccCCCCCCCCC-CcCCcCCCCCEEEEEEeCC-CCeEEEEECC
Confidence 3455555555555667 6789999999999999865 8999998764
No 207
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.76 E-value=6.9 Score=27.28 Aligned_cols=48 Identities=6% Similarity=0.124 Sum_probs=33.5
Q ss_pred hhhhcccccceeecccCC-CCcccceeeeEEEEEeecccccchhccccc
Q psy16075 105 EVVDLTGITLEICRIEPS-TNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 105 ~~~~~~~~~~~~~~~~p~-t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
.++++..+........|+ .++..|.+++|+.+........||+...++
T Consensus 9 ~~~Alydy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~g 57 (75)
T 2ege_A 9 IMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGG 57 (75)
T ss_dssp EEEESSCBCTTTTCCCSSSCCBCCBCTTCEEEEESCCCTTCEEEEESSS
T ss_pred EEEECCCCCCCccccCCCCCCcceECCCCEEEEeEccCCCCEEEEEECC
Confidence 355666665555555566 788899999999998633347899876544
No 208
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=47.78 E-value=12 Score=27.30 Aligned_cols=46 Identities=7% Similarity=0.001 Sum_probs=31.0
Q ss_pred hhhhhcccccceeecccCC-CCcccceeeeEEEEEeecccccchhccc
Q psy16075 104 DEVVDLTGITLEICRIEPS-TNSDIFERTKIVFVFTMLSKTTKWMSDM 150 (241)
Q Consensus 104 ~~~~~~~~~~~~~~~~~p~-t~s~~~~~~~i~~~~~~~~~~~~~~~~~ 150 (241)
..+++|..+.... ..++. .++..|.+++|+++..-.....||+...
T Consensus 18 ~~~~Alydy~~~~-~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~ 64 (96)
T 1wie_A 18 HLCVARYSYNPFD-GPNENPEAELPLTAGKYLYVYGDMDEDGFYEGEL 64 (96)
T ss_dssp EEEEESSCCCGGG-SSCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEE
T ss_pred cEEEECCccCCCc-ccCCCCCCeeeECCCCEEEEeEecCCCCEEEEEE
Confidence 4566666665543 22222 7889999999999993334478998765
No 209
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.97 E-value=8.4 Score=28.24 Aligned_cols=49 Identities=12% Similarity=0.073 Sum_probs=31.6
Q ss_pred hhhhhcccccceeecccC--CCCcccceeeeEEEEEeecccccchhccccc
Q psy16075 104 DEVVDLTGITLEICRIEP--STNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 104 ~~~~~~~~~~~~~~~~~p--~t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
..++++..+.......+| ..++..|.+++|+++....+...||+...+|
T Consensus 18 ~~~~Alydy~~~~~~~~~~~~~~eLsf~~Gd~i~vl~~~~~~gWw~g~~~g 68 (97)
T 2csq_A 18 RIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGETCA 68 (97)
T ss_dssp EEEECSSCBCTTTTSSCHHHHTTBCCBCTTCEEEEEEEECTTCEEEEEETT
T ss_pred eEEEEccccCCCcccccCCCCCCccCCCCCCEEEEEEecCCCCeEEEEECC
Confidence 345666665543222222 2678899999999999655546699876543
No 210
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=36.55 E-value=20 Score=23.77 Aligned_cols=28 Identities=11% Similarity=0.295 Sum_probs=22.3
Q ss_pred CCcccceeeeEEEEEeecccccchhcccc
Q psy16075 123 TNSDIFERTKIVFVFTMLSKTTKWMSDMN 151 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~~~~~~~~~~~ 151 (241)
.++..|.+++++.+....+ ..||+..++
T Consensus 35 ~~eLsf~~Gd~i~v~~~~~-~~Ww~g~~n 62 (62)
T 1g2b_A 35 PREVTMKKGDILTLLNSTN-KDWWKVEVN 62 (62)
T ss_dssp TTBCCBCTTCEEEEEECCS-SSEEEEEEC
T ss_pred CCccCCCCCCEEEEEEecC-CCEEEEEeC
Confidence 4678899999999988765 789987653
No 211
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.35 E-value=29 Score=24.05 Aligned_cols=29 Identities=17% Similarity=0.337 Sum_probs=22.9
Q ss_pred CCcccceeeeEEEEEeecccccchhccccc
Q psy16075 123 TNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
.++..|.+++++.+....+ ..||+...++
T Consensus 31 ~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~g 59 (79)
T 1x69_A 31 DDEISFDPDDIITNIEMID-DGWWRGVCKG 59 (79)
T ss_dssp SSBCCCCTTCEEEEEEECS-SSEEEEEETT
T ss_pred CCCcCcCCCCEEEEeEecC-CCeEEEEECC
Confidence 5678899999999998865 7899876543
No 212
>2odb_B Serine/threonine-protein kinase PAK 6; small GTPase, CRIB, protein-protein complex, structu genomics, structural genomics consortium, SGC; HET: GCP; 2.40A {Homo sapiens}
Probab=31.75 E-value=13 Score=23.31 Aligned_cols=15 Identities=33% Similarity=0.612 Sum_probs=12.3
Q ss_pred ecCCCcccccccccC
Q psy16075 194 TISNPQDFRCGIKGG 208 (241)
Q Consensus 194 ~IS~P~dFRqv~~~~ 208 (241)
.||.|.+|+.++-=|
T Consensus 1 ~Is~Ptnf~H~~Hvg 15 (35)
T 2odb_B 1 EISAPQNFQHRVHTS 15 (35)
T ss_dssp CBCCCEEEEEEEEEE
T ss_pred CCcCCCCCcCeeeee
Confidence 499999999988643
No 213
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.73 E-value=30 Score=24.04 Aligned_cols=30 Identities=13% Similarity=0.242 Sum_probs=23.2
Q ss_pred CCcccceeeeEEEEEeecc-cccchhccccc
Q psy16075 123 TNSDIFERTKIVFVFTMLS-KTTKWMSDMNG 152 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~-~~~~~~~~~~~ 152 (241)
.++..|.+++++++....+ ...||+...++
T Consensus 31 ~~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~~g 61 (80)
T 2d8h_A 31 PGDLNFQAGDRITVISKTDSHFDWWEGKLRG 61 (80)
T ss_dssp TTBCEECTTCEEEEEECCSCSSSEEEEEETT
T ss_pred CCeeeEcCCCEEEEeECcCCCCCeEEEEECC
Confidence 4678899999999988764 47899876643
No 214
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=27.25 E-value=38 Score=22.79 Aligned_cols=29 Identities=21% Similarity=0.346 Sum_probs=22.8
Q ss_pred CCcccceeeeEEEEEeecccccchhccccc
Q psy16075 123 TNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
.++..|.+++|+.+....+ ..||....+|
T Consensus 22 ~~eLs~~~Gd~i~v~~~~~-~gWw~g~~~g 50 (67)
T 2eyx_A 22 KTALALEVGELVKVTKINV-SGQWEGECNG 50 (67)
T ss_dssp SSBCCBCSSEEEEEEEECT-TSEEEEEETT
T ss_pred CCccccCCCCEEEEEEecC-CCEEEEEECC
Confidence 3578899999999998865 7899875544
No 215
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=26.80 E-value=34 Score=23.59 Aligned_cols=29 Identities=21% Similarity=0.361 Sum_probs=23.4
Q ss_pred CCcccceeeeEEEEEeecccccchhccccc
Q psy16075 123 TNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
.++..|.+++|+.+....+ ..||+...++
T Consensus 25 ~~eLs~~~Gd~i~v~~~~~-~gWw~g~~~g 53 (73)
T 2ebp_A 25 TDSLKLKKGDIIDIISKPP-MGTWMGLLNN 53 (73)
T ss_dssp CSBCCBCSSCEEEEEECCS-SSCEEEECSS
T ss_pred CCccCCCCCCEEEEEEeCC-CCeEEEEECC
Confidence 5778999999999998855 7899876554
No 216
>2ov2_I Serine/threonine-protein kinase PAK 4; GTPase RAC3, small GTP binding protein, P21 RAC, RAS-related botulinum toxin substrate 3, signalling protein; HET: GCP; 2.10A {Homo sapiens}
Probab=26.69 E-value=17 Score=22.68 Aligned_cols=15 Identities=33% Similarity=0.669 Sum_probs=12.3
Q ss_pred ecCCCcccccccccC
Q psy16075 194 TISNPQDFRCGIKGG 208 (241)
Q Consensus 194 ~IS~P~dFRqv~~~~ 208 (241)
.||.|.+|+.++-=|
T Consensus 1 ~IS~Ptnf~H~~Hvg 15 (35)
T 2ov2_I 1 EISAPSNFEHRVHTG 15 (35)
T ss_dssp CBCCCEEEEEEEEEE
T ss_pred CCcCCCCCcCeeeee
Confidence 499999999988643
No 217
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.17 E-value=32 Score=24.45 Aligned_cols=29 Identities=28% Similarity=0.377 Sum_probs=22.9
Q ss_pred CCcccceeeeEEEEEeecccccchhccccc
Q psy16075 123 TNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
.++..|.+++|+++....+ ..||....++
T Consensus 32 ~~eLsf~~Gd~i~v~~~~~-~~Ww~g~~~g 60 (88)
T 2dbk_A 32 KTALALEVGDIVKVTRMNI-NGQWEGEVNG 60 (88)
T ss_dssp SSBCCBCTTCEEEEEEECT-TSCEEEECSS
T ss_pred CCcccCCCCCEEEEEEecC-CCEEEEEeCC
Confidence 4678999999999998865 7899765443
No 218
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.59 E-value=47 Score=23.54 Aligned_cols=29 Identities=17% Similarity=0.331 Sum_probs=22.9
Q ss_pred CCcccceeeeEEEEEeecccccchhccccc
Q psy16075 123 TNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
.++..|.+++++++....+ ..||+....+
T Consensus 31 ~~eLsf~~Gd~i~v~~~~~-~~Ww~g~~~g 59 (88)
T 1x2q_A 31 DNELTFKHGEIIIVLDDSD-ANWWKGENHR 59 (88)
T ss_dssp SSCCCCCSSCEEEEEECSC-SSSEEEEETT
T ss_pred cCccCCCCCCEEEEEEeCC-CCEEEEEECC
Confidence 4678899999999998654 7899876544
No 219
>2kp6_A Uncharacterized protein; unknown function, structural genomics, PSI-2, protein struct initiative; NMR {Chromobacterium violaceum}
Probab=24.13 E-value=30 Score=26.06 Aligned_cols=22 Identities=27% Similarity=0.560 Sum_probs=17.0
Q ss_pred cCCcccccchhhhhhhhcCCCC
Q psy16075 207 GGSTFNSHKLSNFFAKFGLNNG 228 (241)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~ 228 (241)
|+-....|.|++.|+.+||.|.
T Consensus 2 ~~M~~~~h~l~~LF~QLGL~s~ 23 (82)
T 2kp6_A 2 GHMDTSNHLLPGLFRQLGLEDE 23 (82)
T ss_dssp --CCTTCTHHHHHHHHHTSCCC
T ss_pred CCccCCCCCHHHHHHHhCCCCC
Confidence 4545567999999999999875
No 220
>2qme_I CRIB domain of the serine/threonine-protein kinas; GTPase RAC3, small GTP binding protein, P21 RAC, RAS-related botulinum toxin substrate 3; HET: GCP; 1.75A {Homo sapiens}
Probab=23.71 E-value=21 Score=22.44 Aligned_cols=15 Identities=47% Similarity=0.634 Sum_probs=12.6
Q ss_pred ecCCCcccccccccC
Q psy16075 194 TISNPQDFRCGIKGG 208 (241)
Q Consensus 194 ~IS~P~dFRqv~~~~ 208 (241)
.||.|-||+.|+-=|
T Consensus 1 ~Is~Ptnf~H~~Hvg 15 (36)
T 2qme_I 1 EISLPSDFEHTIHVG 15 (36)
T ss_dssp CBCCCEEEEEEEEEC
T ss_pred CCcCCCCCCCeeEcc
Confidence 499999999998754
No 221
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=23.61 E-value=58 Score=21.26 Aligned_cols=29 Identities=14% Similarity=0.270 Sum_probs=22.9
Q ss_pred CCcccceeeeEEEEEeecccccchhccccc
Q psy16075 123 TNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
.++..|.+++++.+....+ ..||....+|
T Consensus 19 ~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~g 47 (62)
T 1k4u_S 19 PEDLEFQEGDIILVLSKVN-EEWLEGESKG 47 (62)
T ss_dssp SSBCCBCSSCEEEEEEESS-SSCEEEECSS
T ss_pred CCCccCCCCCEEEEEEeCC-CCEEEEEECC
Confidence 4578899999999998865 7899876543
No 222
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=23.43 E-value=50 Score=22.46 Aligned_cols=29 Identities=10% Similarity=0.164 Sum_probs=22.9
Q ss_pred CCcccceeeeEEEEEeecccccchhccccc
Q psy16075 123 TNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
.++..|.+++++++....+ ..||....+|
T Consensus 17 ~~eLsf~~Gd~i~v~~~~~-~~Ww~g~~~g 45 (68)
T 2ew3_A 17 QGELGFKEGDIITLTNQID-ENWYEGMIHG 45 (68)
T ss_dssp TTBCCBCTTCEEEEEEESS-SSEEEEEETT
T ss_pred CCccCCCCCCEEEEEEecC-CCEEEEEECC
Confidence 4678899999999998765 7899876543
No 223
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=22.62 E-value=51 Score=22.94 Aligned_cols=29 Identities=24% Similarity=0.304 Sum_probs=22.9
Q ss_pred CCcccceeeeEEEEEeeccccc-chhccccc
Q psy16075 123 TNSDIFERTKIVFVFTMLSKTT-KWMSDMNG 152 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~~~~-~~~~~~~~ 152 (241)
.++..|.+++++++....+ .. ||....+|
T Consensus 24 ~~eLsf~~Gd~i~v~~~~~-~~gWw~g~~~g 53 (80)
T 2i0n_A 24 TSLLPFKRNDIITITFKDQ-ENKWFMGQLNG 53 (80)
T ss_dssp SSSCCBCSSEEEEEEEESS-SSSEEEEEETT
T ss_pred CCCcCCCCCCEEEEEEecC-CCCEEEEEECC
Confidence 4678899999999999877 55 99776443
No 224
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=22.60 E-value=1.1e+02 Score=21.58 Aligned_cols=25 Identities=12% Similarity=0.215 Sum_probs=20.3
Q ss_pred CCcccceeeeEEEEEeecccccchhcc
Q psy16075 123 TNSDIFERTKIVFVFTMLSKTTKWMSD 149 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~~~~~~~~~ 149 (241)
.++..|.+++++++... + ..||+..
T Consensus 45 ~~eLs~~~Gd~i~v~~~-~-~~Ww~g~ 69 (86)
T 2jxb_A 45 DQELDIKKNERLWLLDD-S-KTWWRVR 69 (86)
T ss_dssp SSBCCCCTTEEEEEEEC-C-SSEEEEE
T ss_pred CCEeccCCCCEEEEEec-C-CCeEEEE
Confidence 46788999999999986 3 6899865
No 225
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=22.43 E-value=67 Score=31.79 Aligned_cols=17 Identities=47% Similarity=0.690 Sum_probs=15.3
Q ss_pred CCCCCCCEEEEECCEEcC
Q psy16075 19 GLLAVNDEVLEVNGILVA 36 (241)
Q Consensus 19 GLLqvGD~ILeINGqsV~ 36 (241)
++ .+||+|++|||+++.
T Consensus 109 ~I-~vGdEIlsING~pv~ 125 (583)
T 3dor_A 109 EI-RVGDELLEVDGAPVQ 125 (583)
T ss_dssp SS-CTTCEEEEETTEEHH
T ss_pred CC-CCCCEEEEECCccHH
Confidence 55 899999999999986
No 226
>1cee_B Wiskott-aldrich syndrome protein WAsp; CDC42 actin regulator GTPase and the GTPase binding domain of ITS effector WAsp; HET: GCP; NMR {Homo sapiens}
Probab=21.89 E-value=32 Score=23.79 Aligned_cols=37 Identities=22% Similarity=0.457 Sum_probs=24.1
Q ss_pred ceecCCCcccccccccCC----ccc----ccchhhhhhhhcCCCC
Q psy16075 192 HITISNPQDFRCGIKGGS----TFN----SHKLSNFFAKFGLNNG 228 (241)
Q Consensus 192 ~~~IS~P~dFRqv~~~~~----~~~----~~~~~~~~~~~~~~~~ 228 (241)
...||.|.||+.|.-=|- -|+ .-.+..+|..-|+...
T Consensus 6 k~~Is~Ptnf~Hv~HvG~d~~~gf~~~g~pp~W~~ll~~sGIt~~ 50 (59)
T 1cee_B 6 KADIGAPSGFKHVSHVGWDPQNGFDVNNLDPDLRSLFSRAGISEA 50 (59)
T ss_dssp TTTSCCCCCCEEEEEECCCTTTCCCCSSCCHHHHHHHTTTTSCSS
T ss_pred CCcccCCCCCCCcceeccCCCCCcccCCCCHHHHHHHHHcCCCHH
Confidence 378999999999986431 143 3345566776666543
No 227
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=21.25 E-value=53 Score=22.58 Aligned_cols=29 Identities=17% Similarity=0.481 Sum_probs=22.4
Q ss_pred CCcccceeeeEEEEEeecccccchhccccc
Q psy16075 123 TNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
.++..|.+++++.+....+ ..||....++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~g 49 (78)
T 2yuo_A 21 DDELGFRKNDIITIISQKD-EHCWVGELNG 49 (78)
T ss_dssp TTBCCBCTTCEEEEEECCS-SSEEEEEETT
T ss_pred CCCccCCCCCEEEEEEecC-CCEEEEEECC
Confidence 4678899999999998765 7899765443
No 228
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=21.18 E-value=47 Score=22.20 Aligned_cols=29 Identities=28% Similarity=0.377 Sum_probs=22.3
Q ss_pred CCcccceeeeEEEEEeecccccchhccccc
Q psy16075 123 TNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
.++..|.+++++.+....+ ..||....+|
T Consensus 17 ~~eLsf~~Gd~i~v~~~~~-~~Ww~g~~~g 45 (67)
T 2bzy_A 17 KTALALEVGDIVKVTRMNI-NGQWEGEVNG 45 (67)
T ss_dssp TTBCCBCTTCEEEEEEECS-SSEEEEEETT
T ss_pred CCccccCCCCEEEEEEecC-CCeEEEEeCC
Confidence 4678899999999988865 7899765443
No 229
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=20.99 E-value=46 Score=22.25 Aligned_cols=29 Identities=10% Similarity=0.236 Sum_probs=22.9
Q ss_pred CCcccceeeeEEEEEeecccccchhccccc
Q psy16075 123 TNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
.++..|.+++++.+....+ ..||....++
T Consensus 21 ~~eLsf~~Gd~i~v~~~~~-~~Ww~g~~~~ 49 (68)
T 1tg0_A 21 EDDLNFEKDQEIIVTSVED-AEWYFGEYQD 49 (68)
T ss_dssp TTBCCBCTTCEEEEEEECS-SSEEEEEEEC
T ss_pred cCCCCCCCCCEEEEEEecC-CCeEEEEECC
Confidence 4678899999999988755 7899876654
No 230
>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=20.90 E-value=40 Score=26.25 Aligned_cols=53 Identities=13% Similarity=0.091 Sum_probs=36.2
Q ss_pred CCCcchhhhhhccccccee-----ecccC-C------CCcccceeeeEEEEEeecccccchhcccc
Q psy16075 98 SEDDEQDEVVDLTGITLEI-----CRIEP-S------TNSDIFERTKIVFVFTMLSKTTKWMSDMN 151 (241)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~-----~~~~p-~------t~s~~~~~~~i~~~~~~~~~~~~~~~~~~ 151 (241)
..+.+|.|++.-+.++-++ -.+++ . ..++.|+++.++-++.+.+ .+||.+.=+
T Consensus 18 ~~ek~eke~rkKFk~~G~~~vl~~~~a~~~f~~~k~g~~DLpfkkGE~LeVI~~~e-~~wwLcRNs 82 (102)
T 1ri9_A 18 KQEKEEKDFRKKFKYDGEIRVLYSTKVTTSITSKKWGTRDLQVKPGESLEVIQTTD-DTKVLCRNE 82 (102)
T ss_dssp --CHHHHHHHHHTCCCSCCCCSSCCBCCTTSCSSCCCTTBCCCCTTCBCEEEEESS-SSEEEEEET
T ss_pred HHHHHHHHHHHHhccCCCceEEEEEEEeeccccccCCcccCCcCCCCEEEEEEeCC-CCEEEEECC
Confidence 3466777787777654442 23332 2 6789999999999999988 499987643
No 231
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=20.78 E-value=32 Score=23.65 Aligned_cols=29 Identities=14% Similarity=0.341 Sum_probs=22.6
Q ss_pred CCcccceeeeEEEEEeecccccchhccccc
Q psy16075 123 TNSDIFERTKIVFVFTMLSKTTKWMSDMNG 152 (241)
Q Consensus 123 t~s~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (241)
.++..|.+++++++....+ ..||+...++
T Consensus 24 ~~eLsf~~Gd~i~v~~~~~-~~Ww~g~~~~ 52 (76)
T 2ed1_A 24 DDELTFIEGEVIIVTGEED-QEWWIGHIEG 52 (76)
T ss_dssp SSBCCCCSSCEEEESSCCS-SSEEEEEETT
T ss_pred cCCcCcCCCCEEEEEEecC-CCEEEEEECC
Confidence 4578899999999987654 7899877544
Done!