RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16075
(241 letters)
>d1rzxa_ b.36.1.1 (A:) GTPase-binding domain of the cell polarity
protein par6 (Par-6B) {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 98
Score = 64.6 bits (157), Expect = 2e-14
Identities = 58/61 (95%), Positives = 60/61 (98%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
PGIFISRLVPGGLAESTGLLAVNDEV+EVNGI VAGK+LDQVTDMMVANSSNLIITVKPA
Sbjct: 38 PGIFISRLVPGGLAESTGLLAVNDEVIEVNGIEVAGKTLDQVTDMMVANSSNLIITVKPA 97
Query: 62 N 62
N
Sbjct: 98 N 98
>d1kwaa_ b.36.1.1 (A:) Cask/Lin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 88
Score = 58.7 bits (142), Expect = 3e-12
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62
++R++ GG+ G L V DE+ E+NGI VA ++++Q+ M+ ++ + P+
Sbjct: 26 HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSY 85
Query: 63 Q 63
+
Sbjct: 86 R 86
>d1ujda_ b.36.1.1 (A:) Hypothetical protein KIAA0559 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 58.8 bits (142), Expect = 5e-12
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
G +I++++PGG AE TG L +VLE NGI + K+ ++V ++ S I V+
Sbjct: 49 IGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRL- 107
Query: 62 NQRANMSVPRRG 73
NMS P G
Sbjct: 108 --DLNMSGPSSG 117
>d1va8a1 b.36.1.1 (A:8-107) Maguk p55 subfamily member 5 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 100
Score = 58.0 bits (140), Expect = 7e-12
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
+ ISR+V GG AE +GLL DEVLE+NGI + GK +++V D++ L + P+
Sbjct: 42 SVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPS 100
>d1n7ea_ b.36.1.1 (A:) Glutamate receptor-interacting protein 1,
GRIP1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 95
Score = 56.0 bits (135), Expect = 3e-11
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
I IS L GGLAE TG + + D +L +N + GK L + ++ + + +K
Sbjct: 28 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQ 87
Query: 62 NQ 63
Sbjct: 88 TD 89
>d2fcfa1 b.36.1.1 (A:1148-1243) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 56.1 bits (135), Expect = 3e-11
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60
GIFI ++ A G L D ++EV+G+ + S +Q + + + ++ V+
Sbjct: 36 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQS 94
>d1x45a1 b.36.1.1 (A:8-92) Amyloid beta A4 precursor
protein-binding family A member 1 (APBA1, X11) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 55.6 bits (134), Expect = 4e-11
Identities = 13/59 (22%), Positives = 30/59 (50%)
Query: 1 VPGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
+P + I+ ++ GG AE +G L + D+++ +NG + G L ++ + + +
Sbjct: 25 LPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKGLKNQSRVKLN 83
>d1ihja_ b.36.1.1 (A:) Inad {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 94
Score = 55.7 bits (134), Expect = 4e-11
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
GIFI +VP A G L V D +L +NG V + V D++ + + ++
Sbjct: 35 TGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ 92
>d1x5ra1 b.36.1.1 (A:8-106) Glutamate receptor interacting protein
2, GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId:
9606]}
Length = 99
Score = 55.3 bits (133), Expect = 7e-11
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
+ + P AE GLL V D VL +NGI ++++ ++ + + ++
Sbjct: 39 PPLVCFIEPDSPAERCGLLQVGDRVLSINGIATEDGTMEEANQLLRDAALAHKVVLE 95
>d1qava_ b.36.1.1 (A:) Syntrophin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 90
Score = 54.5 bits (131), Expect = 9e-11
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
I IS++ G A+ T L V D +L VNG ++ + D+ + +++ VK
Sbjct: 30 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVK 87
>d1rgra_ b.36.1.1 (A:) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 93
Score = 54.1 bits (130), Expect = 2e-10
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
P IFI++++PGG A G L VND +L VN + V + + + S + + V
Sbjct: 31 PSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVM 88
>d1v62a_ b.36.1.1 (A:) Glutamate receptor interacting protein 2,
GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 54.3 bits (130), Expect = 2e-10
Identities = 18/75 (24%), Positives = 33/75 (44%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
I I R+ P + + +G L D +L ++G + SL + T ++ + S + + + P
Sbjct: 42 SVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEKVRLEILPV 101
Query: 62 NQRANMSVPRRGSYS 76
Q P G S
Sbjct: 102 PQSQRPLRPSSGPSS 116
>d1wf8a1 b.36.1.1 (A:8-101) Neurabin-i {Human (Homo sapiens)
[TaxId: 9606]}
Length = 94
Score = 53.3 bits (128), Expect = 3e-10
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
GIF+ + GG A+ G + VND+++EV+GI + G + + ++ N+ +
Sbjct: 33 LGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIG 90
>d1uewa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 114
Score = 53.9 bits (129), Expect = 3e-10
Identities = 15/72 (20%), Positives = 29/72 (40%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
I R++ G A+ L V D +L VNG + + ++ ++ + + P
Sbjct: 43 VPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQ 102
Query: 62 NQRANMSVPRRG 73
+ + S P G
Sbjct: 103 EELNSPSGPSSG 114
>d1v5qa_ b.36.1.1 (A:) Glutamate receptor interacting protein {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 122
Score = 52.3 bits (125), Expect = 1e-09
Identities = 17/72 (23%), Positives = 32/72 (44%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62
IS + AE G+L + D V+ +NGI + ++ ++ +S +T++
Sbjct: 46 PPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEF 105
Query: 63 QRANMSVPRRGS 74
A +P GS
Sbjct: 106 DVAESVIPSSGS 117
>d2csja1 b.36.1.1 (A:8-111) Tight junction protein ZO-2, Tjp2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 104
Score = 51.8 bits (124), Expect = 1e-09
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
I IS ++PGG A+ GLL ND V+ VNG + + + I VK
Sbjct: 39 TSIVISDVLPGGPAD--GLLQENDRVVMVNGTPMEDVLHSFAVQQLRKSGKIAAIVVK 94
>d1g9oa_ b.36.1.1 (A:) Na+/H+ exchanger regulatory factor, NHERF
{Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 51.0 bits (122), Expect = 2e-09
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60
G +I + PG AE GLL D ++EVNG V ++ QV + A + + + V
Sbjct: 27 LGQYIRLVEPGSPAEKAGLL-AGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVD 84
>d1t2ma1 b.36.1.1 (A:2-93) Afadin {Human (Homo sapiens) [TaxId:
9606]}
Length = 92
Score = 50.3 bits (120), Expect = 4e-09
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
GI++ +V GG A+ G LA D++L V+G + G S ++ ++M SS + + V
Sbjct: 31 LGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVA 88
>d2fnea1 b.36.1.1 (A:1955-2042) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 88
Score = 50.2 bits (120), Expect = 4e-09
Identities = 11/57 (19%), Positives = 25/57 (43%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITV 58
I++ + G A G L D+++ VNG + G + ++ ++ + + V
Sbjct: 30 LPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMV 86
>d2cssa1 b.36.1.1 (A:8-115) Regulating synaptic membrane exocytosis
protein 1, RIMS1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 108
Score = 50.3 bits (120), Expect = 5e-09
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
G FI+++ G LA+ G L DEVLE NG + G + ++V ++++ + S + +
Sbjct: 47 LGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEII 104
>d1um1a_ b.36.1.1 (A:) Hypothetical protein KIAA1849 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 50.3 bits (120), Expect = 5e-09
Identities = 19/73 (26%), Positives = 34/73 (46%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
PG++I L+PG A + G L++ D +LEVNG + G + D++ + V +
Sbjct: 36 PGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGKKMRFLVAKS 95
Query: 62 NQRANMSVPRRGS 74
+ + S
Sbjct: 96 DVETAKKIHSGPS 108
>d1wi4a1 b.36.1.1 (A:8-103) Syntaxin binding protein 4 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 96
Score = 49.9 bits (119), Expect = 6e-09
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMM 47
P ++I ++PGG G L D+++ +N + G S ++ ++
Sbjct: 34 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSII 79
>d1v6ba_ b.36.1.1 (A:) Harmonin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 118
Score = 50.0 bits (119), Expect = 1e-08
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMM------VANSSNLI 55
+ +S + GG AE G + DE++ +NG +V +L + + + +L+
Sbjct: 43 GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLV 102
Query: 56 ITVKPANQ 63
+ V P +
Sbjct: 103 VAVCPPKE 110
>d1uepa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 49.5 bits (118), Expect = 1e-08
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63
I I ++ G A+ G L DE++ V+GI VAGK+ V D+M + N + + +
Sbjct: 36 ILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTV--R 93
Query: 64 RANMSVPRRG 73
R +S P G
Sbjct: 94 RKVLSGPSSG 103
>d1y7na1 b.36.1.1 (A:12-90) Amyloid beta A4 precursor
protein-binding family A member 1 (APBA1, X11) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 48.6 bits (116), Expect = 1e-08
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
I L+ GG+AE G+ V ++E+NG V +++ ++ + + PA
Sbjct: 21 NGIICSLMRGGIAERGGVR-VGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPA 78
>d1ozia_ b.36.1.1 (A:) Phosphatase hPTP1e {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 99
Score = 48.8 bits (116), Expect = 1e-08
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
GI++ ++P G AES G + D VL VNG+ + G + Q + + + + ++
Sbjct: 37 GGIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLE 94
>d1p1da2 b.36.1.1 (A:115-213) Glutamate receptor interacting
protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 99
Score = 48.7 bits (116), Expect = 2e-08
Identities = 11/58 (18%), Positives = 28/58 (48%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
+ IS + G +A TG L + D++L ++ I + S++ ++ + + ++
Sbjct: 38 DPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVKLKIR 95
>d1q3oa_ b.36.1.1 (A:) Shank1, PDZ domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 104
Score = 48.9 bits (116), Expect = 2e-08
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITV 58
++ + GG+A GL + D ++EVNG V QV +M+ + L++ V
Sbjct: 43 ALQYLESVDEGGVAWRAGLR-MGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKV 98
>d1tp5a1 b.36.1.1 (A:302-403) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 102
Score = 48.7 bits (116), Expect = 2e-08
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
GIFIS ++ GG A+ +G L D++L VNG+ + S +Q + + I +
Sbjct: 33 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK 92
Query: 62 NQRAN 66
+ +
Sbjct: 93 PEEYS 97
>d1wfva_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 48.8 bits (116), Expect = 2e-08
Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
+++ RL G A G + V D+++E+NG + + +++ + + + +K
Sbjct: 36 MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLLLK-- 93
Query: 62 NQRANMSVPRRG 73
R S P G
Sbjct: 94 --RGTGSGPSSG 103
>d2f5ya1 b.36.1.1 (A:19-95) Regulator of G-protein signaling 3,
RGS3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 47.9 bits (114), Expect = 2e-08
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
+ + + GG AE GL D VL++N V ++ + + S +I+ V
Sbjct: 18 SPVRVQAVDSGGPAERAGLQ-QLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVW 74
>d1x6da1 b.36.1.2 (A:8-114) Interleukin 16 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 107
Score = 48.4 bits (115), Expect = 3e-08
Identities = 13/57 (22%), Positives = 23/57 (40%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITV 58
I + R+ P GLA G + +EVL +NG + G + ++ +
Sbjct: 35 KVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVI 91
>d1whaa_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 48.0 bits (114), Expect = 4e-08
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
GIF+SR+ GG A G L V D VL +NG+ V D ++ A S + + +
Sbjct: 38 AGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAASPTIALLL--- 94
Query: 62 NQRANMSVPRRG 73
+R S P G
Sbjct: 95 -EREAGSGPSSG 105
>d1uf1a_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 128
Score = 48.5 bits (115), Expect = 4e-08
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
GI+I+ + PG AE +GL V D++LEVNG D+ ++ +S +LI+TVK
Sbjct: 46 LGIYITGVDPGSEAEGSGL-KVGDQILEVNGRSFLNILHDEAVRLL-KSSRHLILTVK-- 101
Query: 62 NQRANMSVPRRGSYSRTSQLSSDS 85
R + T ++S S
Sbjct: 102 --DVGRLPHARTTVDETKWIASSS 123
>d1ueqa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 123
Score = 48.4 bits (115), Expect = 4e-08
Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 9/88 (10%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
+ + ++P G A G + D ++ +N + V G + V + + P
Sbjct: 44 EFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQS---------VPI 94
Query: 62 NQRANMSVPRRGSYSRTSQLSSDSHQST 89
Q N+ + R + ++S S+
Sbjct: 95 GQSVNLVLCRGYPLPFDPEDPANSGPSS 122
>d2cs5a1 b.36.1.1 (A:8-113) Tyrosine-protein phosphatase
non-receptor type 4, PTPN4 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 106
Score = 47.6 bits (113), Expect = 5e-08
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 3 GIFISRLVPGGLAE-STGLLAVNDEVLEVNGILVAGKSLDQVTDMMVA----NSSNLIIT 57
+ +SR+ PG A+ L D+V+ +NG +A + DQV + A +S L++
Sbjct: 35 PVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLL 94
Query: 58 VKP 60
V+P
Sbjct: 95 VRP 97
>d1x5na1 b.36.1.1 (A:8-108) Harmonin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 47.2 bits (112), Expect = 6e-08
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
PGIFIS + PG L+ G L + D+++EVNG+ + + +++ +S +L I++ A
Sbjct: 34 PGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVL-KSSRSLTISIVAA 91
Query: 62 NQR 64
R
Sbjct: 92 AGR 94
>d1uhpa_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 107
Score = 47.3 bits (112), Expect = 6e-08
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
GIF+S++V G A G L ++D ++EVNG ++ + DQ + +++ V
Sbjct: 41 EGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTAKEPIVVQVL 98
>d1ufxa_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 47.2 bits (112), Expect = 6e-08
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMM 47
P I + GG A + G L V +LEVNG+ + GK + ++
Sbjct: 32 PLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARII 77
>d2h3la1 b.36.1.1 (A:1310-1412) Erbin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 46.8 bits (111), Expect = 8e-08
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
GIF++R+ P G A LL D++++ NG Q ++ + + + +
Sbjct: 43 DGIFVTRVQPEGPAS--KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV 98
>d1m5za_ b.36.1.1 (A:) Glutamate receptor interacting protein {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 91
Score = 46.5 bits (110), Expect = 8e-08
Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
G+++ + P G + G L D +L+VN + V ++ + + L + +
Sbjct: 32 KGVYVKNIRPAGPGD-LGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVIS 88
>d1w9ea1 b.36.1.1 (A:110-194) Syntenin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 85
Score = 46.0 bits (109), Expect = 1e-07
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLI-ITVK 59
GIF+ + A GL D+VL++NG AG S D+ ++ I +T++
Sbjct: 26 GIFVQLVQANSPASLVGLR-FGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIR 82
>d1rgwa_ b.36.1.1 (A:) Zasp (Cypher, Oracle 1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 85
Score = 46.0 bits (109), Expect = 1e-07
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
+ ISR+ PG A L+ D V+ ++G+ + + + + + S NL +T++ +
Sbjct: 25 MPLTISRITPGSKAA-QSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKS 83
Query: 62 NQ 63
+
Sbjct: 84 KR 85
>d2fe5a1 b.36.1.1 (A:223-314) Synapse-associated protein 102
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 46.1 bits (109), Expect = 1e-07
Identities = 13/58 (22%), Positives = 27/58 (46%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
I+I++++ GG A+ G L + D +L VN + ++ + S + + V
Sbjct: 31 NSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVA 88
>d1ujua_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 111
Score = 46.2 bits (109), Expect = 2e-07
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
GIFIS++ P G A G L V +LEVN + G + + ++ + L + V
Sbjct: 44 EGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLVCDG 103
Query: 62 NQR 64
+
Sbjct: 104 FES 106
>d1x5qa1 b.36.1.1 (A:8-104) Scribble (KIAA0147) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 45.7 bits (108), Expect = 2e-07
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
GIFISR+ G A G+ V D++LEVNG+ + G + + + + + + V
Sbjct: 39 EGIFISRVSEEGPAARAGVR-VGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVW 95
>d2f0aa1 b.36.1.1 (A:251-342) Segment polarity protein dishevelled
homolog Dvl-2 {African clawed frog (Xenopus laevis)
[TaxId: 8355]}
Length = 92
Score = 44.5 bits (105), Expect = 5e-07
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMM 47
GI+I ++ GG + G + D +L+VN I S D ++
Sbjct: 29 GGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVL 74
>d1ueza_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 44.5 bits (105), Expect = 6e-07
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
GI++S + PG LAE GL V D++L VN +A + + + S L+++V
Sbjct: 35 VGIYVSLVEPGSLAEKEGLR-VGDQILRVNDKSLARVTHAEAVKAL-KGSKKLVLSVY-- 90
Query: 62 NQRANMSVPRRG 73
+S P G
Sbjct: 91 -SAGRISGPSSG 101
>d1wf7a_ b.36.1.1 (A:) Enigma homolog ENH {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 103
Score = 44.2 bits (104), Expect = 8e-07
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
+ IS L GG A + + D VL ++GI G + + + + A + +L +T++ A
Sbjct: 29 MPLTISSLKDGGKAS-QAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRA 87
Query: 62 NQRANMSVPRRGSYS 76
+ A G S
Sbjct: 88 SAAAKSEPVSSGPSS 102
>d1wifa_ b.36.1.1 (A:) hypothetical PDZ domain containing protein
Uqcrc2 (4930408O21Rik) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 126
Score = 44.6 bits (105), Expect = 9e-07
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
P + IS L+ G A S G+L D ++ V V G +L + ++ + ++ +K
Sbjct: 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIK 106
>d1i16a_ b.36.1.2 (A:) Interleukin 16 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 44.7 bits (105), Expect = 1e-06
Identities = 15/84 (17%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
+ I+R+ G +E + + DE+L++ G + G + + +++ A + V
Sbjct: 57 KPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIV--- 113
Query: 62 NQRANMSVPRRGSYSRTSQLSSDS 85
+ R+ S+ + + DS
Sbjct: 114 -------IRRKSLQSKETTAAGDS 130
>d1vb7a_ b.36.1.1 (A:) PDZ-LIM protein mystique {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 94
Score = 43.0 bits (101), Expect = 2e-06
Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
I ++++ G AE L D ++ +NG + + ++S L + +
Sbjct: 30 TPIIVTKVTERGKAE-AADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLD 86
>d1wi2a_ b.36.1.1 (A:) PDZ domain containing protein 11, Pdzk11
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 104
Score = 43.0 bits (101), Expect = 2e-06
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVK 59
GIFIS+++P A L D+VL VN + + +++ + + + V+
Sbjct: 41 LGIFISKVIPDSDAH-RAGLQEGDQVLAVNDVDFQDIEHSKAVEIL-KTAREISMRVR 96
>d1qaua_ b.36.1.1 (A:) Neuronal nitric oxide synthase, NNOS {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 112
Score = 43.1 bits (101), Expect = 2e-06
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITV 58
P + IS L+ GG AE +GL+ D +L VN + S D +++ +S + +
Sbjct: 26 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVL 82
>d1uita_ b.36.1.1 (A:) Discs large 5 protein KIAA0583 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 43.1 bits (101), Expect = 3e-06
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
GI++S++ G +A GL D++LE NGI + + Q ++ + I +
Sbjct: 42 GGIYVSKVTVGSIAHQAGLE-YGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYN 100
Query: 62 NQRANMSVPRR 72
+S R
Sbjct: 101 PHVHQLSSHSR 111
>d1wg6a_ b.36.1.1 (A:) Partitioning-defective 3-like protein, PAR3-L
(RIKEN cDNA 2810455b10) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 127
Score = 43.1 bits (101), Expect = 3e-06
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMM 47
GIFI ++ GG A G L +ND+++ VNG + GKS + + +
Sbjct: 55 LGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETL 100
>d1wh1a_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 124
Score = 42.3 bits (99), Expect = 5e-06
Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITV 58
GI+IS + P +A G + D ++++NGI V ++ ++ ++ + + +
Sbjct: 48 IGIYISEIDPNSIAAKDGRIREGDRIIQINGIEV--QNREEAVALLTSEENKNFSLL 102
>d1v5la_ b.36.1.1 (A:) Alpha-actinin-2 associated LIM protein {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 103
Score = 40.0 bits (93), Expect = 2e-05
Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 5/78 (6%)
Query: 2 PGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPA 61
+ I+R+ PG A L D +L ++G + D + A S L + +
Sbjct: 29 QPLVITRITPGSKAA-AANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKI--- 84
Query: 62 NQRANMSVPRRGSYSRTS 79
RA + S S
Sbjct: 85 -DRAETRLWSPQVSSGPS 101
>d1r6ja_ b.36.1.1 (A:) Syntenin 1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 82
Score = 38.4 bits (89), Expect = 6e-05
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 1 VPGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60
I+ +V A GLL + E+NG V G Q+ D++ + + + IT+ P
Sbjct: 22 FKNGKITSIVKDSSAARNGLL-TEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP 80
Query: 61 A 61
A
Sbjct: 81 A 81
>d1vaea_ b.36.1.1 (A:) Rhophilin-2 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 111
Score = 36.9 bits (85), Expect = 3e-04
Identities = 8/69 (11%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Query: 4 IFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLI--ITVKPA 61
+ + L P A D ++ + G+ ++ +V ++ + + V
Sbjct: 38 VQVHFLDPHCSAS-LAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVSLL 96
Query: 62 NQRANMSVP 70
+ ++M
Sbjct: 97 DSTSSMHNK 105
>d1ujva_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 96
Score = 33.8 bits (77), Expect = 0.003
Identities = 9/58 (15%), Positives = 19/58 (32%)
Query: 1 VPGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITV 58
R+ + L D ++E+N V S +V D++ ++
Sbjct: 28 ADSPTGQRVKQILDIQGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSL 85
>d2gx8a1 c.135.1.1 (A:4-373) Nif3-related protein BC4286 {Bacillus
cereus [TaxId: 1396]}
Length = 370
Score = 32.7 bits (74), Expect = 0.034
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 5 FISRLVPGGLAES---TGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIIT 57
+ P LA GL + V +L+A ++V D + +N+II
Sbjct: 10 LFESMYPKHLAMEGDKIGLQ-IGALNKPVRHVLIALDVTEEVVDEAIQLGANVIIA 64
>d2fywa1 c.135.1.1 (A:1-265) Hypothetical protein SP1609
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 265
Score = 32.0 bits (72), Expect = 0.044
Identities = 8/59 (13%), Positives = 17/59 (28%), Gaps = 4/59 (6%)
Query: 5 FISRLVPGGLAES---TGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60
P + GL + + ++VA ++ + +LII
Sbjct: 9 AYEAFCPQEFSMEGDSRGLQ-IGTLDKGIQRVMVALDIREETVAEAIEKGVDLIIVKHA 66
>d1ky9b2 b.36.1.4 (B:359-446) Protease Do (DegP, HtrA), C-terminal
domains {Escherichia coli [TaxId: 562]}
Length = 88
Score = 30.2 bits (68), Expect = 0.045
Identities = 11/62 (17%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 3 GIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPAN 62
G+ ++ + G A GL D ++ N V K++ ++ ++ + S L + ++ +
Sbjct: 26 GVVVNNVKTGTPAAQIGLKK-GDVIIGANQQAV--KNIAELRKVLDSKPSVLALNIQRGD 82
Query: 63 QR 64
Sbjct: 83 ST 84
>d2z9ia1 b.36.1.4 (A:227-314) Protease PepD {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 88
Score = 29.5 bits (66), Expect = 0.088
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 12/78 (15%)
Query: 1 VPGIFISRLVPGGLAESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKP 60
G I +V GG A + G + V +V+ + A++ + K
Sbjct: 15 TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDD-----------RPINSADALVAAVRSKA 62
Query: 61 ANQRANMSVPRRGSYSRT 78
++ SRT
Sbjct: 63 PGATVALTFQDPSGGSRT 80
>d2igia1 c.55.3.5 (A:1-180) Oligoribonuclease {Escherichia coli
[TaxId: 562]}
Length = 180
Score = 27.6 bits (60), Expect = 1.1
Identities = 20/162 (12%), Positives = 42/162 (25%), Gaps = 9/162 (5%)
Query: 16 ESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQRANMSVPRRGSY 75
E TGL D ++E+ LV +L+ + + + + + G
Sbjct: 13 EMTGLDPERDRIIEI-ATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLV 71
Query: 76 SRTSQLSSDSHQSTQSIATTNNSEDDEQDEVVD--LTGITLEICRIEPSTNSDIFERTKI 133
R + ++ + + G F +
Sbjct: 72 ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYL 131
Query: 134 VFVFTMLSKTTKWMSDMNG----HALRILA--RESLEELSNY 169
++G + + RES+ EL+ Y
Sbjct: 132 DVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYY 173
>d1ttya_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermotoga maritima
[TaxId: 2336]}
Length = 87
Score = 25.5 bits (56), Expect = 2.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 153 HALRILARESLEELSNYASSRSKNIISTFLGGTPGKTKSHITIS 196
A+R+L RE LE++ S R ++ G GK K+ +
Sbjct: 2 EAMRMLMREELEKVLKTLSPREAMVLRMRYGLLDGKPKTLEEVG 45
>d1k32a1 b.36.1.3 (A:763-853) Tricorn protease {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 91
Score = 25.4 bits (55), Expect = 3.2
Identities = 5/49 (10%), Positives = 15/49 (30%), Gaps = 1/49 (2%)
Query: 15 AESTGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIITVKPANQ 63
G+ + +++G V S + + ++ I +
Sbjct: 33 IFEYGIDPTGYLIEDIDGETVGAGS-NIYRVLSEKAGTSARIRLSGKGG 80
>d1nmpa_ c.135.1.1 (A:) Hypothetical protein YbgI {Escherichia
coli [TaxId: 562]}
Length = 247
Score = 25.4 bits (55), Expect = 6.5
Identities = 8/40 (20%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 18 TGLLAVNDEVLEVNGILVAGKSLDQVTDMMVANSSNLIIT 57
GL E V I+ + + D V ++ +I
Sbjct: 25 NGLQVEGKE--TVQKIVTGVTASQALLDEAVRLGADAVIV 62
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.129 0.362
Gapped
Lambda K H
0.267 0.0594 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 803,603
Number of extensions: 32898
Number of successful extensions: 150
Number of sequences better than 10.0: 1
Number of HSP's gapped: 140
Number of HSP's successfully gapped: 71
Length of query: 241
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 158
Effective length of database: 1,268,006
Effective search space: 200344948
Effective search space used: 200344948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 52 (24.1 bits)