BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16081
(493 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 567 bits (1461), Expect = e-162, Method: Compositional matrix adjust.
Identities = 285/362 (78%), Positives = 320/362 (88%), Gaps = 1/362 (0%)
Query: 86 GEDSSHKKEKKLYNEGYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQC 145
DSSHKKE+K+YN+GYDDDN+DYI+++GEK++DRYEIDSLIGKGSFGQVVKA+D EQ
Sbjct: 2 ASDSSHKKERKVYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQE 61
Query: 146 HVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY 205
VAIKIIKNKK FLNQAQIEV+LLE+MNK D YYIV LKRHFM+RNHLCLVFE+LSY
Sbjct: 62 WVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY 121
Query: 206 NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI 265
NLYDLLRNTNFRGVSLNLTRKF+QQ+CTALLFL+TPEL+IIHCDLKPENILLCNPKRSAI
Sbjct: 122 NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAI 181
Query: 266 KIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSG 325
KIVDFGSSCQLGQRIYQ IQSRFYRSPEVLLG+PYDLAIDMWSLGCILVEMHTGEPLFSG
Sbjct: 182 KIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 241
Query: 326 SNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDG-RKPKVPGSRRL 384
+NEVDQMNKIVEVLG+PP H+LD A K RK+F+K+PDG++ LKK KDG R+ K PG+R+L
Sbjct: 242 ANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKL 301
Query: 385 HDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTA 444
H+I H+V+DYLKFKDLI RMLDYDPKTRI PYYALQH+FFK+TA
Sbjct: 302 HNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA 361
Query: 445 DE 446
DE
Sbjct: 362 DE 363
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 564 bits (1454), Expect = e-161, Method: Compositional matrix adjust.
Identities = 284/359 (79%), Positives = 319/359 (88%), Gaps = 1/359 (0%)
Query: 89 SSHKKEKKLYNEGYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVA 148
SSHKKE+K+YN+GYDDDN+DYI+++GEK++DRYEIDSLIGKGSFGQVVKA+D EQ VA
Sbjct: 24 SSHKKERKVYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVA 83
Query: 149 IKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLY 208
IKIIKNKK FLNQAQIEV+LLE+MNK D YYIV LKRHFM+RNHLCLVFE+LSYNLY
Sbjct: 84 IKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLY 143
Query: 209 DLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIV 268
DLLRNTNFRGVSLNLTRKF+QQ+CTALLFL+TPEL+IIHCDLKPENILLCNPKRSAIKIV
Sbjct: 144 DLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIV 203
Query: 269 DFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNE 328
DFGSSCQLGQRIYQ IQSRFYRSPEVLLG+PYDLAIDMWSLGCILVEMHTGEPLFSG+NE
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 329 VDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDG-RKPKVPGSRRLHDI 387
VDQMNKIVEVLG+PP H+LD A K RK+F+K+PDG++ LKK KDG R+ K PG+R+LH+I
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNI 323
Query: 388 XXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTADE 446
H+V+DYLKFKDLI RMLDYDPKTRI PYYALQH+FFK+TADE
Sbjct: 324 LGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTADE 382
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 562 bits (1449), Expect = e-160, Method: Compositional matrix adjust.
Identities = 283/359 (78%), Positives = 318/359 (88%), Gaps = 1/359 (0%)
Query: 89 SSHKKEKKLYNEGYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVA 148
SSHKKE+K+YN+GYDDDN+DYI+++GEK++DRYEIDSLIGKGSFGQVVKA+D EQ VA
Sbjct: 24 SSHKKERKVYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVA 83
Query: 149 IKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLY 208
IKIIKNKK FLNQAQIEV+LLE+MNK D YYIV LKRHFM+RNHLCLVFE+LSYNLY
Sbjct: 84 IKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLY 143
Query: 209 DLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIV 268
DLLRNTNFRGVSLNLTRKF+QQ+CTALLFL+TPEL+IIHCDLKPENILLCNPKR AIKIV
Sbjct: 144 DLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIV 203
Query: 269 DFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNE 328
DFGSSCQLGQRIYQ IQSRFYRSPEVLLG+PYDLAIDMWSLGCILVEMHTGEPLFSG+NE
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 329 VDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDG-RKPKVPGSRRLHDI 387
VDQMNKIVEVLG+PP H+LD A K RK+F+K+PDG++ LKK KDG R+ K PG+R+LH+I
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNI 323
Query: 388 XXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTADE 446
H+V+DYLKFKDLI RMLDYDPKTRI PYYALQH+FFK+TADE
Sbjct: 324 LGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTADE 382
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 211/357 (59%), Gaps = 32/357 (8%)
Query: 99 NEGYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF 158
N GYDDD Y+ + RYE+ +IGKGSFGQVVKA+D + HVA+K+++N+K F
Sbjct: 77 NGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRF 136
Query: 159 LNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG 218
QA E+++LE + K D +NT ++ + +F +RNH+C+ FELLS NLY+L++ F+G
Sbjct: 137 HRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG 196
Query: 219 VSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
SL L RKF+ + L L IIHCDLKPENILL RS IK++DFGSSC Q
Sbjct: 197 FSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254
Query: 279 RIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
R+Y IQSRFYR+PEV+LG Y + IDMWSLGCIL E+ TG PL G +E DQ+ ++E+
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 339 LGLPPKHLLDGAHKTRKYFD-----------KMPDGSYILK--KPKDGRKPKVPGSRRLH 385
LG+P + LLD + + + + + DGS +L + + G+ P SR
Sbjct: 315 LGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWG 374
Query: 386 DIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKR 442
+ D L F D + + L++DP R+TP AL+H + +R
Sbjct: 375 NALK----------------GCDDPL-FLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 211/357 (59%), Gaps = 32/357 (8%)
Query: 99 NEGYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF 158
N GYDDD Y+ + RYE+ +IGKGSFGQVVKA+D + HVA+K+++N+K F
Sbjct: 77 NGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRF 136
Query: 159 LNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG 218
QA E+++LE + K D +NT ++ + +F +RNH+C+ FELLS NLY+L++ F+G
Sbjct: 137 HRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG 196
Query: 219 VSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
SL L RKF+ + L L IIHCDLKPENILL RS IK++DFGSSC Q
Sbjct: 197 FSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254
Query: 279 RIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
R+Y IQSRFYR+PEV+LG Y + IDMWSLGCIL E+ TG PL G +E DQ+ ++E+
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 339 LGLPPKHLLDGAHKTRKYFD-----------KMPDGSYILK--KPKDGRKPKVPGSRRLH 385
LG+P + LLD + + + + + DGS +L + + G+ P SR
Sbjct: 315 LGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWG 374
Query: 386 DIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKR 442
+ D L F D + + L++DP R+TP AL+H + +R
Sbjct: 375 NALK----------------GCDDPL-FLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 210/357 (58%), Gaps = 32/357 (8%)
Query: 99 NEGYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF 158
N GYDDD Y+ + RYE+ +IGKG FGQVVKA+D + HVA+K+++N+K F
Sbjct: 77 NGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRF 136
Query: 159 LNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG 218
QA E+++LE + K D +NT ++ + +F +RNH+C+ FELLS NLY+L++ F+G
Sbjct: 137 HRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG 196
Query: 219 VSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
SL L RKF+ + L L IIHCDLKPENILL RS IK++DFGSSC Q
Sbjct: 197 FSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254
Query: 279 RIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
R+Y IQSRFYR+PEV+LG Y + IDMWSLGCIL E+ TG PL G +E DQ+ ++E+
Sbjct: 255 RVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 339 LGLPPKHLLDGAHKTRKYFD-----------KMPDGSYILK--KPKDGRKPKVPGSRRLH 385
LG+P + LLD + + + + + DGS +L + + G+ P SR
Sbjct: 315 LGMPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWG 374
Query: 386 DIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKR 442
+ D L F D + + L++DP R+TP AL+H + +R
Sbjct: 375 NALK----------------GCDDPL-FLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 180/357 (50%), Gaps = 55/357 (15%)
Query: 110 IIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQC-HVAIKIIKNKKPFLNQAQIEVKL 168
I Q G+ RYEI +G+G+FG+VV+ D + HVA+KI+KN + A+ E+++
Sbjct: 5 ICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQV 64
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS 228
LE +N D N+T+ V++ F H+C+VFELL + YD ++ F L+ RK +
Sbjct: 65 LEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLC--------NPK---------RSAIKIVDFG 271
Q+C ++ FL + +L H DLKPENIL NPK IK+VDFG
Sbjct: 125 YQICKSVNFLHSNKLT--HTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 272 SSCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
S+ + + +R YR+PEV+L + + D+WS+GCIL+E + G +F + +
Sbjct: 183 SATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
Query: 332 MNKIVEVLGLPPKHLLDGAHKTRKYF--------DKMPDGSYILKKPKDGRKPKVPGSRR 383
+ + +LG PKH++ K RKYF + G Y+ + K ++ +
Sbjct: 243 LAMMERILGPLPKHMIQKTRK-RKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLS---- 297
Query: 384 LHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
D+ ++ + DLI +ML+YDP RIT AL+H FF
Sbjct: 298 -QDV---------------------EHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 179/357 (50%), Gaps = 55/357 (15%)
Query: 110 IIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQC-HVAIKIIKNKKPFLNQAQIEVKL 168
I Q G+ RYEI +G+G+FG+VV+ D + HVA+KI+KN + A+ E+++
Sbjct: 5 ICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQV 64
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS 228
LE +N D N+T+ V++ F H+C+VFELL + YD ++ F L+ RK +
Sbjct: 65 LEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLC--------NPK---------RSAIKIVDFG 271
Q+C ++ FL + +L H DLKPENIL NPK IK+VDFG
Sbjct: 125 YQICKSVNFLHSNKLT--HTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 272 SSCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
S+ + + R YR+PEV+L + + D+WS+GCIL+E + G +F + +
Sbjct: 183 SATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
Query: 332 MNKIVEVLGLPPKHLLDGAHKTRKYF--------DKMPDGSYILKKPKDGRKPKVPGSRR 383
+ + +LG PKH++ K RKYF + G Y+ + K ++ +
Sbjct: 243 LAMMERILGPLPKHMIQKTRK-RKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLS---- 297
Query: 384 LHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
D+ ++ + DLI +ML+YDP RIT AL+H FF
Sbjct: 298 -QDV---------------------EHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 179/363 (49%), Gaps = 40/363 (11%)
Query: 103 DDDNHDYIIQH-GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQ-CHVAIKIIKNKKPFLN 160
+DD ++I H G+ +RYEI S +G+G+FG+VV+ D VA+KIIKN + +
Sbjct: 16 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 75
Query: 161 QAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVS 220
A++E+ +LE +N+ D +N V++ F + H+C+ FELL + +D L++ N+
Sbjct: 76 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 135
Query: 221 LNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNP-----------------KRS 263
++ R + QLC A+ FL +L H DLKPENIL N K +
Sbjct: 136 IHQVRHMAFQLCQAVKFLHDNKLT--HTDLKPENILFVNSDYELTYNLEKKRDERSVKST 193
Query: 264 AIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
A+++VDFGS+ + + +R YR+PEV+L + + D+WS+GCI+ E + G LF
Sbjct: 194 AVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLF 253
Query: 324 SGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRR 383
+ + + + +LG P ++ K + ++ D + R+ P R
Sbjct: 254 QTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRY 313
Query: 384 LHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRT 443
L ++ + DLI ML+Y+P R+T ALQH FF R
Sbjct: 314 L-------------------TSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFARL 354
Query: 444 ADE 446
E
Sbjct: 355 RAE 357
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 178/366 (48%), Gaps = 59/366 (16%)
Query: 103 DDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFD-LEEQCHVAIKIIKNKKPFLNQ 161
DD + + G+ +RYEI +G+G+FG+VV+ D + VA+KII+N +
Sbjct: 35 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 94
Query: 162 AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSL 221
A++E+ +L+ + + D N + V + F + H+C+ FELL N ++ L+ NF+ L
Sbjct: 95 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 154
Query: 222 NLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNP-----------------KRSA 264
R + QLC AL FL +L H DLKPENIL N K ++
Sbjct: 155 PHVRHMAYQLCHALRFLHENQLT--HTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 212
Query: 265 IKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFS 324
I++ DFGS+ + + +R YR PEV+L + + D+WS+GCIL E + G LF
Sbjct: 213 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 272
Query: 325 GSNEVDQMNKIVEVLGLPPKHLLDGAHKTR--KYF--------DKMPDGSYILKKPKDGR 374
+ + + ++LG P H++ H+TR KYF + DG Y+ K+
Sbjct: 273 THENREHLVMMEKILGPIPSHMI---HRTRKQKYFYKGGLVWDENSSDGRYV----KENC 325
Query: 375 KPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYA 434
KP S L D ++++ DL+ RML++DP RIT A
Sbjct: 326 KP--LKSYMLQDSL--------------------EHVQLFDLMRRMLEFDPAQRITLAEA 363
Query: 435 LQHNFF 440
L H FF
Sbjct: 364 LLHPFF 369
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 178/366 (48%), Gaps = 59/366 (16%)
Query: 103 DDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFD-LEEQCHVAIKIIKNKKPFLNQ 161
DD + + G+ +RYEI +G+G+FG+VV+ D + VA+KII+N +
Sbjct: 12 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 71
Query: 162 AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSL 221
A++E+ +L+ + + D N + V + F + H+C+ FELL N ++ L+ NF+ L
Sbjct: 72 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 131
Query: 222 NLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNP-----------------KRSA 264
R + QLC AL FL +L H DLKPENIL N K ++
Sbjct: 132 PHVRHMAYQLCHALRFLHENQLT--HTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 189
Query: 265 IKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFS 324
I++ DFGS+ + + +R YR PEV+L + + D+WS+GCIL E + G LF
Sbjct: 190 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 249
Query: 325 GSNEVDQMNKIVEVLGLPPKHLLDGAHKTR--KYF--------DKMPDGSYILKKPKDGR 374
+ + + ++LG P H++ H+TR KYF + DG Y+ K+
Sbjct: 250 THENREHLVMMEKILGPIPSHMI---HRTRKQKYFYKGGLVWDENSSDGRYV----KENC 302
Query: 375 KPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYA 434
KP S L D ++++ DL+ RML++DP RIT A
Sbjct: 303 KP--LKSYMLQDSL--------------------EHVQLFDLMRRMLEFDPAQRITLAEA 340
Query: 435 LQHNFF 440
L H FF
Sbjct: 341 LLHPFF 346
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 178/366 (48%), Gaps = 59/366 (16%)
Query: 103 DDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFD-LEEQCHVAIKIIKNKKPFLNQ 161
DD + + G+ +RYEI +G+G+FG+VV+ D + VA+KII+N +
Sbjct: 3 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62
Query: 162 AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSL 221
A++E+ +L+ + + D N + V + F + H+C+ FELL N ++ L+ NF+ L
Sbjct: 63 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122
Query: 222 NLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNP-----------------KRSA 264
R + QLC AL FL +L H DLKPENIL N K ++
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLT--HTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 180
Query: 265 IKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFS 324
I++ DFGS+ + + +R YR PEV+L + + D+WS+GCIL E + G LF
Sbjct: 181 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240
Query: 325 GSNEVDQMNKIVEVLGLPPKHLLDGAHKTR--KYF--------DKMPDGSYILKKPKDGR 374
+ + + ++LG P H++ H+TR KYF + DG Y+ K+
Sbjct: 241 THENREHLVMMEKILGPIPSHMI---HRTRKQKYFYKGGLVWDENSSDGRYV----KENC 293
Query: 375 KPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYA 434
KP S L D ++++ DL+ RML++DP RIT A
Sbjct: 294 KP--LKSYMLQDSL--------------------EHVQLFDLMRRMLEFDPAQRITLAEA 331
Query: 435 LQHNFF 440
L H FF
Sbjct: 332 LLHPFF 337
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 145/265 (54%), Gaps = 21/265 (7%)
Query: 114 GEKFLD-RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIM 172
GE + D RY + +G G F V A D+ HVA+KI++ K + A+ E+KLL+ +
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 173 NKADVN-----NTYYIVRLKRHFMWRN----HLCLVFELLSYNLYDLLRNTNFRGVSLNL 223
N AD +I++L HF + H+ +VFE+L NL L++ RG+ L
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 224 TRKFSQQLCTALLFLSTPELNIIHCDLKPENILL---CNPKR-SAIKIVDFGSSCQLGQR 279
++ S+QL L ++ IIH D+KPEN+L+ +P+ IKI D G++C +
Sbjct: 133 VKQISKQLLLGLDYMHR-RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 280 IYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF------SGSNEVDQMN 333
IQ+R YRSPEVLLG P+ D+WS C++ E+ TG+ LF S + + D +
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251
Query: 334 KIVEVLGLPPKHLLDGAHKTRKYFD 358
+I+E+LG P +LL TR +F+
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFN 276
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 145/265 (54%), Gaps = 21/265 (7%)
Query: 114 GEKFLD-RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIM 172
GE + D RY + +G G F V A D+ HVA+KI++ K + A+ E+KLL+ +
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 173 NKADVN-----NTYYIVRLKRHFMWRN----HLCLVFELLSYNLYDLLRNTNFRGVSLNL 223
N AD +I++L HF + H+ +VFE+L NL L++ RG+ L
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 224 TRKFSQQLCTALLFLSTPELNIIHCDLKPENILL---CNPKR-SAIKIVDFGSSCQLGQR 279
++ S+QL L ++ IIH D+KPEN+L+ +P+ IKI D G++C +
Sbjct: 133 VKQISKQLLLGLDYMHR-RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 280 IYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF------SGSNEVDQMN 333
IQ+R YRSPEVLLG P+ D+WS C++ E+ TG+ LF S + + D +
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251
Query: 334 KIVEVLGLPPKHLLDGAHKTRKYFD 358
+I+E+LG P +LL TR +F+
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFN 276
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 163/346 (47%), Gaps = 50/346 (14%)
Query: 112 QHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
+ K +DR++++ + G+G+FG V + VAIK + F N+ L+I
Sbjct: 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE------LQI 69
Query: 172 MNKADVNNTYYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLN-- 222
M V + IV+L+ +F +L +V E + L+ RN R V+
Sbjct: 70 MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPI 129
Query: 223 LTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG--QRI 280
L + F QL ++ L P +N+ H D+KP N+L+ N +K+ DFGS+ +L +
Sbjct: 130 LIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV-NEADGTLKLCDFGSAKKLSPSEPN 188
Query: 281 YQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVL 339
YI SR+YR+PE++ G Y A+D+WS+GCI EM GEP+F G N Q+++IV VL
Sbjct: 189 VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVL 248
Query: 340 GLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXX 399
G P + +L + + D L K +P S D
Sbjct: 249 GCPSREVLRKLNPSHTDVD--------LYNSKG-----IPWSNVFSD------------- 282
Query: 400 XXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
HS+ D + DL+ +L Y P+ R+ PY AL H +F D
Sbjct: 283 -----HSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 163/337 (48%), Gaps = 70/337 (20%)
Query: 101 GYDDDNHD----------YIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIK 150
G DDD + ++++ G+ F RY + +G G F V ++D++ + VA+K
Sbjct: 9 GSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMK 68
Query: 151 IIKNKKPFLNQAQIEVKLLEIMNKADVN--NTYYIVRLKRHF----MWRNHLCLVFELLS 204
++K+ + + A E++LL+ + +D N N +V+L F + H+C+VFE+L
Sbjct: 69 VVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLG 128
Query: 205 YNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLC------ 258
++L + +N++G+ L +K QQ+ L +L T + IIH D+KPENILL
Sbjct: 129 HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYI 187
Query: 259 -----------------------------------------NPKRSAIKIVDFGSSCQLG 277
N ++ +KI D G++C +
Sbjct: 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH 247
Query: 278 QRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF---SG---SNEVDQ 331
+ + IQ+R YRS EVL+G Y+ D+WS C+ E+ TG+ LF SG + + D
Sbjct: 248 KHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDH 307
Query: 332 MNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILK 368
+ I+E+LG P+ L+ ++++F K D +I K
Sbjct: 308 IALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 176/370 (47%), Gaps = 48/370 (12%)
Query: 97 LYNEGYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK 156
LY +G DD+ + + G + + + +G G+FG+V+ ++ + + A+K+++N K
Sbjct: 14 LYFQG-DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK 72
Query: 157 PFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRH--FMWRNHLCLVFELLSYNLYDLLRNT 214
+ A+IE +I+ K ++ +K H FM+ +H+CL+FE L +LY+++
Sbjct: 73 KYTRSAKIEA---DILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRN 129
Query: 215 NFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNP-------------- 260
N+ G + + + ++ AL +L ++++ H DLKPENILL +P
Sbjct: 130 NYNGFHIEDIKLYCIEILKALNYLR--KMSLTHTDLKPENILLDDPYFEKSLITVRRVTD 187
Query: 261 ---------KRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGC 311
K + IK++DFG + I +R YR+PEV+L + +D++ DMWS GC
Sbjct: 188 GKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGC 247
Query: 312 ILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPK 371
+L E++TG LF ++ + + ++ PK++L A KT +GS + K
Sbjct: 248 VLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKT--------NGSKYVNKD- 298
Query: 372 DGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITP 431
+ K+ I H + F D ++ +L DP R +P
Sbjct: 299 ---ELKLAWPENASSINSIKHVKKCLPLYKIIKHEL-----FCDFLYSILQIDPTLRPSP 350
Query: 432 YYALQHNFFK 441
L+H F +
Sbjct: 351 AELLKHKFLE 360
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 158/319 (49%), Gaps = 60/319 (18%)
Query: 109 YIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL 168
++++ G+ F RY + +G G F V ++D++ + VA+K++K+ + + A E++L
Sbjct: 11 HLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRL 70
Query: 169 LEIMNKADVN--NTYYIVRLKRHF----MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLN 222
L+ + +D N N +V+L F + H+C+VFE+L ++L + +N++G+ L
Sbjct: 71 LKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLP 130
Query: 223 LTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLC------------------------ 258
+K QQ+ L +L T + IIH D+KPENILL
Sbjct: 131 CVKKIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPP 189
Query: 259 -----------------------NPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVL 295
N ++ +KI D G++C + + + IQ+R YRS EVL
Sbjct: 190 SGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVL 249
Query: 296 LGIPYDLAIDMWSLGCILVEMHTGEPLF---SG---SNEVDQMNKIVEVLGLPPKHLLDG 349
+G Y+ D+WS C+ E+ TG+ LF SG + + D + I+E+LG P+ L+
Sbjct: 250 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVA 309
Query: 350 AHKTRKYFDKMPDGSYILK 368
++++F K D +I K
Sbjct: 310 GKYSKEFFTKKGDLKHITK 328
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 164/342 (47%), Gaps = 63/342 (18%)
Query: 84 SQGEDSSHKKEKKLYNEGYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEE 143
S G D +++ Y +G + ++ G+ F RY + +G G F V +D++
Sbjct: 1 SMGSDDEEQEDPADYCKG-----GYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQG 55
Query: 144 QCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN--NTYYIVRLKRHF----MWRNHLC 197
+ VA+K++K+ + + A E+KLL+ + ++D + N +V+L F M H+C
Sbjct: 56 KRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVC 115
Query: 198 LVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILL 257
+VFE+L ++L + +N++G+ + + +Q+ L +L + + IIH D+KPENIL+
Sbjct: 116 MVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHS-KCKIIHTDIKPENILM 174
Query: 258 C---------------------------------------------NPKRSAIKIVDFGS 272
C N + +KI D G+
Sbjct: 175 CVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGN 234
Query: 273 SCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF---SG---S 326
+C + + + IQ+R YRS EVL+G Y D+WS C+ E+ TG+ LF SG S
Sbjct: 235 ACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYS 294
Query: 327 NEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILK 368
+ D + I+E+LG P+H +R++F++ + +I K
Sbjct: 295 RDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITK 336
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 150/330 (45%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 66
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE LS +L D + + G+ L L + + QL L F +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 124
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 125 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 235
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 236 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 260
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 261 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 150/330 (45%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 67
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE LS +L D + + G+ L L + + QL L F +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 126
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 127 -VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 236
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 237 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 261
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 262 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 149/330 (45%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 64
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L D + + G+ L L + + QL L F +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKPEN+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 RVLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 233
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 234 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 258
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 149/330 (45%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 65
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE LS +L + + G+ L L + + QL L F +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKPEN+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 RVLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 234
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 235 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 259
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 260 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 149/330 (45%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 67
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE LS +L + + G+ L L + + QL L F +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKPEN+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 126 RVLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 236
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 237 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 261
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 262 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 162/339 (47%), Gaps = 63/339 (18%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 108
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 109 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ YI SR+Y
Sbjct: 166 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 222
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 276
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKP--KVPGSRRLHDIXXXXXXXXXXXXXXXXXHS 406
TR+ +M K P+ P KV R +
Sbjct: 277 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIA----------------- 315
Query: 407 VSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 316 ---------LCSRLLEYTPTARLTPLEACAHSFFDELRD 345
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 162/339 (47%), Gaps = 63/339 (18%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 102
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 103 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 159
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ YI SR+Y
Sbjct: 160 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 216
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 270
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKP--KVPGSRRLHDIXXXXXXXXXXXXXXXXXHS 406
TR+ +M K P+ P KV R +
Sbjct: 271 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIA----------------- 309
Query: 407 VSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 310 ---------LCSRLLEYTPTARLTPLEACAHSFFDELRD 339
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 162/339 (47%), Gaps = 63/339 (18%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 110
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 111 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 167
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ YI SR+Y
Sbjct: 168 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 224
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 278
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKP--KVPGSRRLHDIXXXXXXXXXXXXXXXXXHS 406
TR+ +M K P+ P KV R +
Sbjct: 279 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIA----------------- 317
Query: 407 VSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 318 ---------LCSRLLEYTPTARLTPLEACAHSFFDELRD 347
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 162/339 (47%), Gaps = 63/339 (18%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 153
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 154 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 210
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ YI SR+Y
Sbjct: 211 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 267
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 321
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKP--KVPGSRRLHDIXXXXXXXXXXXXXXXXXHS 406
TR+ +M K P+ P KV R +
Sbjct: 322 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIA----------------- 360
Query: 407 VSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 361 ---------LCSRLLEYTPTARLTPLEACAHSFFDELRD 390
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 162/339 (47%), Gaps = 63/339 (18%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 112
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 113 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 169
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ YI SR+Y
Sbjct: 170 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 226
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 280
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKP--KVPGSRRLHDIXXXXXXXXXXXXXXXXXHS 406
TR+ +M K P+ P KV R +
Sbjct: 281 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIA----------------- 319
Query: 407 VSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 320 ---------LCSRLLEYTPTARLTPLEACAHSFFDELRD 349
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 162/337 (48%), Gaps = 59/337 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------LQIMRKLDHCN- 74
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 75 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ YI SR+Y
Sbjct: 132 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 242
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
TR+ +M K P+ P R +++
Sbjct: 243 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFR-----------------PRTPPEAIA 281
Query: 409 DYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 282 -------LCSRLLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 162/337 (48%), Gaps = 59/337 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 87
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 88 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 144
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ YI SR+Y
Sbjct: 145 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 201
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 202 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 255
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
TR+ +M K P+ P R +++
Sbjct: 256 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFR-----------------PRTPPEAIA 294
Query: 409 DYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 295 -------LCSRLLEYTPTARLTPLEACAHSFFDELRD 324
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 162/339 (47%), Gaps = 63/339 (18%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 79
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 80 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 136
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ YI SR+Y
Sbjct: 137 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 193
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 247
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKP--KVPGSRRLHDIXXXXXXXXXXXXXXXXXHS 406
TR+ +M K P+ P KV R +
Sbjct: 248 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIA----------------- 286
Query: 407 VSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 287 ---------LCSRLLEYTPTARLTPLEACAHSFFDELRD 316
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 162/337 (48%), Gaps = 59/337 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 74
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 75 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ YI SR+Y
Sbjct: 132 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 242
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
TR+ +M K P+ P R +++
Sbjct: 243 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFR-----------------PRTPPEAIA 281
Query: 409 DYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 282 -------LCSRLLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 154/341 (45%), Gaps = 67/341 (19%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIM 172
+F++ ++ IG+G++G V KA + VA+K I+ + + A E+ LL+ +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N + IV+L N L LVFE L +L + + G+ L L + + QL
Sbjct: 67 NHPN------IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFY 289
L F + ++H DLKP+N+L+ AIK+ DFG + G + Y + + +Y
Sbjct: 121 QGLAFCHSH--RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 176
Query: 290 RSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE+LLG Y A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + +
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 236
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
G MPD KP P R
Sbjct: 237 GV-------TSMPD-----------YKPSFPKWAR------------------------Q 254
Query: 409 DYLKF--------KDLIFRMLDYDPKTRITPYYALQHNFFK 441
D+ K + L+ +ML YDP RI+ AL H FF+
Sbjct: 255 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 154/341 (45%), Gaps = 67/341 (19%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIM 172
+F++ ++ IG+G++G V KA + VA+K I+ + + A E+ LL+ +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N + IV+L N L LVFE L +L + + G+ L L + + QL
Sbjct: 67 NHPN------IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFY 289
L F + ++H DLKP+N+L+ AIK+ DFG + G + Y + + +Y
Sbjct: 121 QGLAFCHSH--RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWY 176
Query: 290 RSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE+LLG Y A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + +
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 236
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
G MPD KP P R
Sbjct: 237 GV-------TSMPD-----------YKPSFPKWAR------------------------Q 254
Query: 409 DYLKF--------KDLIFRMLDYDPKTRITPYYALQHNFFK 441
D+ K + L+ +ML YDP RI+ AL H FF+
Sbjct: 255 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 159/337 (47%), Gaps = 59/337 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------LQIMRKLDHCN- 74
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 75 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ YI SR+Y
Sbjct: 132 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P + +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
+ F ++ K R P
Sbjct: 249 EMNPNYTEFAFPQIKAHPWTKVFRPRTPP------------------------------- 277
Query: 409 DYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
+ L R+L+Y P R+TP A H+FF D
Sbjct: 278 ---EAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 66
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 124
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKPEN+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 125 RVLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 235
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 236 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 260
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 261 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 65
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKPEN+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 RVLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 234
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 235 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 259
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 260 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 75/357 (21%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNN 179
+Y + +G GSFG V + FD+E A+K + + N+ +K+L+ +N + +
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVD 67
Query: 180 TYYIVRLK----------------RHFMWRNH-------------LCLVFELLSYNLYDL 210
+Y + ++ NH L ++ E + L+ +
Sbjct: 68 YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127
Query: 211 LRN--TNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIV 268
L++ + R + +NL + QL A+ F+ + L I H D+KP+N LL N K + +K+
Sbjct: 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS--LGICHRDIKPQN-LLVNSKDNTLKLC 184
Query: 269 DFGSSCQL--GQRIYQYIQSRFYRSPEVLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSG 325
DFGS+ +L + I SRFYR+PE++LG Y +ID+WS+GC+ E+ G+PLFSG
Sbjct: 185 DFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSG 244
Query: 326 SNEVDQMNKIVEVLGLPPKHLLD--GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRR 383
+DQ+ +I++++G P K + H T F + K KD RK G+
Sbjct: 245 ETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTL--------KAKDWRKILPEGTPS 296
Query: 384 LHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
L DL+ ++L Y+P RI PY A+ H FF
Sbjct: 297 LA----------------------------IDLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 64
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY 180
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 233
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 234 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 258
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 161/339 (47%), Gaps = 63/339 (18%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 108
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 109 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ I SR+Y
Sbjct: 166 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 222
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 276
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKP--KVPGSRRLHDIXXXXXXXXXXXXXXXXXHS 406
TR+ +M K P+ P KV R +
Sbjct: 277 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIA----------------- 315
Query: 407 VSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 316 ---------LCSRLLEYTPTARLTPLEACAHSFFDELRD 345
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 66
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 124
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 125 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 235
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 236 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 260
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 261 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 68
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 126
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 127 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 184
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 237
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 238 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 262
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 263 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 67
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 126 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 236
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 237 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 261
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 262 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 66
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 124
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 125 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 235
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 236 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 260
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 261 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 65
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 234
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 235 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 259
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 260 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 153/343 (44%), Gaps = 67/343 (19%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLE 170
G ++ ++ IG+G++G V KA + VA+K I+ + + A E+ LL+
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+N + IV+L N L LVFE L +L + + G+ L L + + Q
Sbjct: 61 ELNHPN------IVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQ 114
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSR 287
L L F + ++H DLKP+N+L+ AIK+ DFG + G + Y + +
Sbjct: 115 LLQGLAFCHSHR--VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 288 FYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
+YR+PE+LLG Y A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + +
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 347 LDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHS 406
G MPD KP P R
Sbjct: 231 WPGV-------TSMPD-----------YKPSFPKWAR----------------------- 249
Query: 407 VSDYLKF--------KDLIFRMLDYDPKTRITPYYALQHNFFK 441
D+ K + L+ +ML YDP RI+ AL H FF+
Sbjct: 250 -QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 65
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 181
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 234
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 235 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 259
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 260 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 64
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 233
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 234 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 258
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 64
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 233
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 234 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 258
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 67
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 126 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 236
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 237 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 261
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 262 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 64
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 233
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 234 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 258
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 64
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 233
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 234 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 258
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 64
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 233
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 234 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 258
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 64
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 233
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 234 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 258
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 63
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 122 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 232
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 233 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 257
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 68
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 126
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 127 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 184
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 237
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 238 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 262
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 263 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 63
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 122 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 232
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 233 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 257
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 65
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 124 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 234
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 235 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 259
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 260 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 161/337 (47%), Gaps = 59/337 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 86
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 87 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ I SR+Y
Sbjct: 144 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 200
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 254
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
TR+ +M K P+ P R +++
Sbjct: 255 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFR-----------------PRTPPEAIA 293
Query: 409 DYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 294 -------LCSRLLEYTPTARLTPLEACAHSFFDELRD 323
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 164/358 (45%), Gaps = 65/358 (18%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G V A+D + +VAIK K +PF NQ
Sbjct: 7 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++++N ++ + ++ + +V EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---- 120
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ + + +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKS--DATLKILDFGLA 173
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM G LF G++ +DQ
Sbjct: 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 233
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPD-GSYILKK-------PKDGRKPKVPGSR 382
NK++E LG P + T R Y + P Y +K P D K+ S+
Sbjct: 234 WNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 383 RLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
+DL+ +ML D RI+ ALQH +
Sbjct: 294 A------------------------------RDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 63
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 122 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 232
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 233 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 257
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 63
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 122 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 232
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 233 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 257
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 161/337 (47%), Gaps = 59/337 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 74
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 75 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ I SR+Y
Sbjct: 132 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 242
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
TR+ +M K P+ P R +++
Sbjct: 243 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFR-----------------PRTPPEAIA 281
Query: 409 DYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 282 -------LCSRLLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 161/337 (47%), Gaps = 59/337 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 82
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 83 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 139
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ I SR+Y
Sbjct: 140 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 196
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 250
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
TR+ +M K P+ P R +++
Sbjct: 251 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFR-----------------PRTPPEAIA 289
Query: 409 DYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 290 -------LCSRLLEYTPTARLTPLEACAHSFFDELRD 319
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 161/337 (47%), Gaps = 59/337 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 93
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 94 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 150
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ I SR+Y
Sbjct: 151 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 207
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 261
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
TR+ +M K P+ P R +++
Sbjct: 262 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFR-----------------PRTPPEAIA 300
Query: 409 DYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 301 -------LCSRLLEYTPTARLTPLEACAHSFFDELRD 330
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 161/337 (47%), Gaps = 59/337 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 86
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 87 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ I SR+Y
Sbjct: 144 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 200
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 254
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
TR+ +M K P+ P R +++
Sbjct: 255 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFR-----------------PRTPPEAIA 293
Query: 409 DYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 294 -------LCSRLLEYTPTARLTPLEACAHSFFDELRD 323
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 64
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH-- 122
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 233
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 234 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 258
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 161/337 (47%), Gaps = 59/337 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 78
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 79 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 135
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ I SR+Y
Sbjct: 136 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 192
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 246
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
TR+ +M K P+ P R +++
Sbjct: 247 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFR-----------------PRTPPEAIA 285
Query: 409 DYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 286 -------LCSRLLEYTPTARLTPLEACAHSFFDELRD 315
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 161/337 (47%), Gaps = 59/337 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 74
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 75 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ I SR+Y
Sbjct: 132 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 242
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
TR+ +M K P+ P R +++
Sbjct: 243 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFR-----------------PRTPPEAIA 281
Query: 409 DYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 282 -------LCSRLLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 154/324 (47%), Gaps = 49/324 (15%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK--NKKPFLNQAQIEVKLLEIMNKADVNNTYYIV 184
+G G++ V K + +VA+K +K +++ + A E+ L++ + ++ Y ++
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 185 RLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF----RGVSLNLTRKFSQQLCTALLFLST 240
+ N L LVFE + +L + + RG+ LNL + F QL L F
Sbjct: 73 HTE------NKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH- 125
Query: 241 PELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLG 297
E I+H DLKP+N+L+ KR +K+ DFG + G + + + + +YR+P+VL+G
Sbjct: 126 -ENKILHRDLKPQNLLIN--KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 298 I-PYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKY 356
Y +ID+WS GCIL EM TG+PLF G+N+ +Q+ I +++G P + L K KY
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242
Query: 357 FDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDL 416
+ + P+D R+ P ++ D D
Sbjct: 243 NPNIQQ-----RPPRDLRQVLQPHTKEPLDG------------------------NLMDF 273
Query: 417 IFRMLDYDPKTRITPYYALQHNFF 440
+ +L +P R++ AL H +F
Sbjct: 274 LHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 161/337 (47%), Gaps = 59/337 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 75
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 76 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 132
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ I SR+Y
Sbjct: 133 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 189
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 243
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
TR+ +M K P+ P R +++
Sbjct: 244 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFR-----------------PRTPPEAIA 282
Query: 409 DYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 283 -------LCSRLLEYTPTARLTPLEACAHSFFDELRD 312
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 161/337 (47%), Gaps = 59/337 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 74
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 75 --IVRL-RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ I SR+Y
Sbjct: 132 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------ 242
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
TR+ +M K P+ P R +++
Sbjct: 243 ----TREQIREMNPNYTEFKFPQIKAHPWTKVFR-----------------PRTPPEAIA 281
Query: 409 DYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
L R+L+Y P R+TP A H+FF D
Sbjct: 282 -------LCSRLLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 158/337 (46%), Gaps = 59/337 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +IG GSFG V +A + VAIK + K F N+ L+IM K D N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------LQIMRKLDHCN- 74
Query: 181 YYIVRLKRHFMWRN-------HLCLVFELLSYNLYDLLRNTNFRGVSLNL--TRKFSQQL 231
IVRL R+F + + +L LV + + +Y + R+ + +L + + + QL
Sbjct: 75 --IVRL-RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + I H D+KP+N+LL +P + +K+ DFGS+ QL G+ I SR+Y
Sbjct: 132 FRSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y +ID+WS GC+L E+ G+P+F G + VDQ+ +I++VLG P + +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVS 408
+ F ++ K R P
Sbjct: 249 EMNPNYTEFAFPQIKAHPWTKVFRPRTPP------------------------------- 277
Query: 409 DYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
+ L R+L+Y P R+TP A H+FF D
Sbjct: 278 ---EAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 165/357 (46%), Gaps = 63/357 (17%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G V A+D + +VAIK K +PF NQ
Sbjct: 7 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++++N ++ + ++ + +V EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---- 120
Query: 217 RGVSLNLTRK--FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSC 274
+ L+ R Q+ + L + IIH DLKP NI++ + + +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLVGIKHLHSA--GIIHRDLKPSNIVVKS--DATLKILDFGLAR 174
Query: 275 QLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQM 332
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM G LF G++ +DQ
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 234
Query: 333 NKIVEVLGLPPKHLLDGAHKT-RKYFDKMPD-GSYILKK-------PKDGRKPKVPGSRR 383
NK++E LG P + T R Y + P Y +K P D K+ S+
Sbjct: 235 NKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 294
Query: 384 LHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
+DL+ +ML D RI+ ALQH +
Sbjct: 295 ------------------------------RDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 163/358 (45%), Gaps = 65/358 (18%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G V A+D + +VAIK K +PF NQ
Sbjct: 7 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + ++ + +V EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---- 120
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ + + +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKS--DATLKILDFGLA 173
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM G LF G++ +DQ
Sbjct: 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 233
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPD-GSYILKK-------PKDGRKPKVPGSR 382
NK++E LG P + T R Y + P Y +K P D K+ S+
Sbjct: 234 WNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 383 RLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
+DL+ +ML D RI+ ALQH +
Sbjct: 294 A------------------------------RDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 145/330 (43%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKA---FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA E I++ + + A E+ LL+ +N + I
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN------I 64
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 233
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 234 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 258
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 145/330 (43%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKA---FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA E I++ + + A E+ LL+ +N + I
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN------I 63
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE L +L + + G+ L L + + QL L F +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 122 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 232
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 233 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 257
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 153/343 (44%), Gaps = 67/343 (19%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLE 170
G ++ ++ IG+G++G V KA + VA+K I+ + + A E+ LL+
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+N + IV+L N L LVFE + +L + + G+ L L + + Q
Sbjct: 61 ELNHPN------IVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSR 287
L L F + ++H DLKP+N+L+ AIK+ DFG + G + Y + +
Sbjct: 115 LLQGLAFCHSH--RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 288 FYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
+YR+PE+LLG Y A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + +
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 347 LDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHS 406
G MPD KP P R
Sbjct: 231 WPGV-------TSMPD-----------YKPSFPKWAR----------------------- 249
Query: 407 VSDYLKF--------KDLIFRMLDYDPKTRITPYYALQHNFFK 441
D+ K + L+ +ML YDP RI+ AL H FF+
Sbjct: 250 -QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 165/357 (46%), Gaps = 63/357 (17%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G VV A+D + +VAIK K +PF NQ
Sbjct: 7 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++++N ++ + ++ + +V EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---- 120
Query: 217 RGVSLNLTRK--FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSC 274
+ L+ R Q+ + L + IIH DLKP NI++ + + +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLVGIKHLHSA--GIIHRDLKPSNIVVKS--DATLKILDFGLAR 174
Query: 275 QLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQM 332
G Y+ +R+YR+PEV+LG+ Y +D+WS+G I+ EM G LF G++ +DQ
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQW 234
Query: 333 NKIVEVLGLPPKHLLDGAHKT-RKYFDKMPD-GSYILKK-------PKDGRKPKVPGSRR 383
NK++E LG P + T R Y + P Y +K P D K+ S+
Sbjct: 235 NKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 294
Query: 384 LHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
+DL+ +ML D RI+ ALQH +
Sbjct: 295 ------------------------------RDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IG+G++G V KA + VA+K I+ + + A E+ LL+ +N + I
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------I 63
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
V+L N L LVFE + +L + + G+ L L + + QL L F +
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLGIPY 300
++H DLKP+N+L+ AIK+ DFG + G + Y + + +YR+PE+LLG Y
Sbjct: 122 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 301 -DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDK 359
A+D+WSLGCI EM T LF G +E+DQ+ +I LG P + + G
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV-------TS 232
Query: 360 MPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF------ 413
MPD KP P R D+ K
Sbjct: 233 MPD-----------YKPSFPKWAR------------------------QDFSKVVPPLDE 257
Query: 414 --KDLIFRMLDYDPKTRITPYYALQHNFFK 441
+ L+ +ML YDP RI+ AL H FF+
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 161/358 (44%), Gaps = 65/358 (18%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G V A+D + +VAIK K +PF NQ
Sbjct: 7 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + ++ + +V EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---- 120
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 173
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM G LF G++ +DQ
Sbjct: 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 233
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPD-GSYILKK-------PKDGRKPKVPGSR 382
NK++E LG P + T R Y + P Y +K P D K+ S+
Sbjct: 234 WNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 383 RLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
+DL+ +ML D RI+ ALQH +
Sbjct: 294 A------------------------------RDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 161/358 (44%), Gaps = 65/358 (18%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G V A+D + +VAIK K +PF NQ
Sbjct: 7 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + ++ + +V EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---- 120
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 173
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM G LF G++ +DQ
Sbjct: 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 233
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPD-GSYILKK-------PKDGRKPKVPGSR 382
NK++E LG P + T R Y + P Y +K P D K+ S+
Sbjct: 234 WNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 383 RLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
+DL+ +ML D RI+ ALQH +
Sbjct: 294 A------------------------------RDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 161/358 (44%), Gaps = 65/358 (18%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G V A+D + +VAIK K +PF NQ
Sbjct: 8 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQ 65
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + ++ + +V EL+ NL +++
Sbjct: 66 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---- 121
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 122 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 174
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM G LF G++ +DQ
Sbjct: 175 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 234
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPD-GSYILKK-------PKDGRKPKVPGSR 382
NK++E LG P + T R Y + P Y +K P D K+ S+
Sbjct: 235 WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 294
Query: 383 RLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
+DL+ +ML D RI+ ALQH +
Sbjct: 295 A------------------------------RDLLSKMLVIDASKRISVDEALQHPYI 322
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 161/358 (44%), Gaps = 65/358 (18%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G V A+D + +VAIK K +PF NQ
Sbjct: 7 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + ++ + +V EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---- 120
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 173
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM G LF G++ +DQ
Sbjct: 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 233
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPD-GSYILKK-------PKDGRKPKVPGSR 382
NK++E LG P + T R Y + P Y +K P D K+ S+
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 383 RLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
+DL+ +ML D RI+ ALQH +
Sbjct: 294 A------------------------------RDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 157/338 (46%), Gaps = 64/338 (18%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCH-VAIKIIKNKK-----PFLNQAQIEV-KLLEIM 172
+YE + IG+G++G+V KA DL+ VA+K ++ + P ++ V + LE
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+V + + + R L LVFE + +L L GV + QL
Sbjct: 72 EHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY-------IQ 285
L FL + ++H DLKP+NIL+ + + IK+ DFG + RIY + +
Sbjct: 131 RGLDFLHSH--RVVHRDLKPQNILVTSSGQ--IKLADFGLA-----RIYSFQMALTSVVV 181
Query: 286 SRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKH 345
+ +YR+PEVLL Y +D+WS+GCI EM +PLF GS++VDQ+ KI++V+GLP +
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 346 LLDGAHKTRKYFDKMPDGSYILKKPKDG--RKPKVPGSRRLHDIXXXXXXXXXXXXXXXX 403
D + P+ K P + + DI
Sbjct: 242 ----------------DWPRDVALPRQAFHSKSAQPIEKFVTDI---------------- 269
Query: 404 XHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFK 441
D L KDL+ + L ++P RI+ Y AL H +F+
Sbjct: 270 -----DELG-KDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 157/338 (46%), Gaps = 64/338 (18%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCH-VAIKIIKNKK-----PFLNQAQIEV-KLLEIM 172
+YE + IG+G++G+V KA DL+ VA+K ++ + P ++ V + LE
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+V + + + R L LVFE + +L L GV + QL
Sbjct: 72 EHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY-------IQ 285
L FL + ++H DLKP+NIL+ + + IK+ DFG + RIY + +
Sbjct: 131 RGLDFLHSH--RVVHRDLKPQNILVTSSGQ--IKLADFGLA-----RIYSFQMALTSVVV 181
Query: 286 SRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKH 345
+ +YR+PEVLL Y +D+WS+GCI EM +PLF GS++VDQ+ KI++V+GLP +
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 346 LLDGAHKTRKYFDKMPDGSYILKKPKDG--RKPKVPGSRRLHDIXXXXXXXXXXXXXXXX 403
D + P+ K P + + DI
Sbjct: 242 ----------------DWPRDVALPRQAFHSKSAQPIEKFVTDI---------------- 269
Query: 404 XHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFK 441
D L KDL+ + L ++P RI+ Y AL H +F+
Sbjct: 270 -----DELG-KDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 157/338 (46%), Gaps = 64/338 (18%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCH-VAIKIIKNKK-----PFLNQAQIEV-KLLEIM 172
+YE + IG+G++G+V KA DL+ VA+K ++ + P ++ V + LE
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+V + + + R L LVFE + +L L GV + QL
Sbjct: 72 EHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY-------IQ 285
L FL + ++H DLKP+NIL+ + + IK+ DFG + RIY + +
Sbjct: 131 RGLDFLHSH--RVVHRDLKPQNILVTSSGQ--IKLADFGLA-----RIYSFQMALTSVVV 181
Query: 286 SRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKH 345
+ +YR+PEVLL Y +D+WS+GCI EM +PLF GS++VDQ+ KI++V+GLP +
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 346 LLDGAHKTRKYFDKMPDGSYILKKPKDG--RKPKVPGSRRLHDIXXXXXXXXXXXXXXXX 403
D + P+ K P + + DI
Sbjct: 242 ----------------DWPRDVALPRQAFHSKSAQPIEKFVTDI---------------- 269
Query: 404 XHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFK 441
D L KDL+ + L ++P RI+ Y AL H +F+
Sbjct: 270 -----DELG-KDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 164/357 (45%), Gaps = 63/357 (17%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G V A+D + +VAIK K +PF NQ
Sbjct: 7 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++++N ++ + ++ + +V EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---- 120
Query: 217 RGVSLNLTRK--FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSC 274
+ L+ R Q+ + L + IIH DLKP NI++ + + +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLVGIKHLHSA--GIIHRDLKPSNIVVKS--DATLKILDFGLAR 174
Query: 275 QLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQM 332
G Y+ +R+YR+PEV+LG+ Y +D+WS+G I+ EM G LF G++ +DQ
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQW 234
Query: 333 NKIVEVLGLPPKHLLDGAHKT-RKYFDKMPD-GSYILKK-------PKDGRKPKVPGSRR 383
NK++E LG P + T R Y + P Y +K P D K+ S+
Sbjct: 235 NKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 294
Query: 384 LHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
+DL+ +ML D RI+ ALQH +
Sbjct: 295 ------------------------------RDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 149/339 (43%), Gaps = 65/339 (19%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK--NKKPFLNQAQI-EVKLLEIMNKAD 176
RYE + IG G++G V KA D VA+K ++ N + L + + EV LL + +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 177 VNNTYYIV------RLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
N ++ R R + LVFE + +L L G+ + +Q
Sbjct: 65 HPNVVRLMDVCATSRTDREI----KVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY------- 283
L FL I+H DLKPENIL+ + +K+ DFG + RIY Y
Sbjct: 121 FLRGLDFLHAN--CIVHRDLKPENILVTS--GGTVKLADFGLA-----RIYSYQMALDPV 171
Query: 284 IQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPP 343
+ + +YR+PEVLL Y +DMWS+GCI EM +PLF G++E DQ+ KI +++GLPP
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 344 KHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXX 403
+ D + P+ P+ G R + +
Sbjct: 232 ED----------------DWPRDVSLPRGAFPPR--GPRPVQSVVPEMEESG-------- 265
Query: 404 XHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKR 442
L+ ML ++P RI+ + ALQH++ +
Sbjct: 266 ----------AQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 162/358 (45%), Gaps = 65/358 (18%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G V A+D + +VAIK K +PF NQ
Sbjct: 9 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQ 66
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + ++ + +V EL+ NL +++
Sbjct: 67 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---- 122
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 123 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 175
Query: 274 CQLGQR--IYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G + ++ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM G LF G++ +DQ
Sbjct: 176 RTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 235
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPD-GSYILKK-------PKDGRKPKVPGSR 382
NK++E LG P + T R Y + P Y +K P D K+ S+
Sbjct: 236 WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 295
Query: 383 RLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
+DL+ +ML D RI+ ALQH +
Sbjct: 296 A------------------------------RDLLSKMLVIDASKRISVDEALQHPYI 323
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 149/339 (43%), Gaps = 65/339 (19%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK--NKKPFLNQAQI-EVKLLEIMNKAD 176
RYE + IG G++G V KA D VA+K ++ N + L + + EV LL + +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 177 VNNTYYIV------RLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
N ++ R R + LVFE + +L L G+ + +Q
Sbjct: 65 HPNVVRLMDVCATSRTDREI----KVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY------- 283
L FL I+H DLKPENIL+ + +K+ DFG + RIY Y
Sbjct: 121 FLRGLDFLHAN--CIVHRDLKPENILVTS--GGTVKLADFGLA-----RIYSYQMALAPV 171
Query: 284 IQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPP 343
+ + +YR+PEVLL Y +DMWS+GCI EM +PLF G++E DQ+ KI +++GLPP
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 344 KHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXX 403
+ D + P+ P+ G R + +
Sbjct: 232 ED----------------DWPRDVSLPRGAFPPR--GPRPVQSVVPEMEESG-------- 265
Query: 404 XHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKR 442
L+ ML ++P RI+ + ALQH++ +
Sbjct: 266 ----------AQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 149/339 (43%), Gaps = 65/339 (19%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK--NKKPFLNQAQI-EVKLLEIMNKAD 176
RYE + IG G++G V KA D VA+K ++ N + L + + EV LL + +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 177 VNNTYYIV------RLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
N ++ R R + LVFE + +L L G+ + +Q
Sbjct: 65 HPNVVRLMDVCATSRTDREI----KVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY------- 283
L FL I+H DLKPENIL+ + +K+ DFG + RIY Y
Sbjct: 121 FLRGLDFLHAN--CIVHRDLKPENILVTS--GGTVKLADFGLA-----RIYSYQMALFPV 171
Query: 284 IQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPP 343
+ + +YR+PEVLL Y +DMWS+GCI EM +PLF G++E DQ+ KI +++GLPP
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 344 KHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXX 403
+ D + P+ P+ G R + +
Sbjct: 232 ED----------------DWPRDVSLPRGAFPPR--GPRPVQSVVPEMEESG-------- 265
Query: 404 XHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKR 442
L+ ML ++P RI+ + ALQH++ +
Sbjct: 266 ----------AQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 160/347 (46%), Gaps = 75/347 (21%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
+RY+ S +G G++G V ++D++ +A+K K +PF Q+ I K
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVK--KLSRPF--QSIIHAK----------- 95
Query: 179 NTYYIVRLKRHFMWRNHLCL--VF----ELLSYNLYDLLRNTNFRGVSLN-------LTR 225
TY +RL +H N + L VF L +N D+ T+ G LN LT
Sbjct: 96 RTYRELRLLKHMKHENVIGLLDVFTPATSLEEFN--DVYLVTHLMGADLNNIVKCQKLTD 153
Query: 226 KFSQ----QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY 281
Q Q+ L ++ + +IIH DLKP N L + +KI+DFG + +
Sbjct: 154 DHVQFLIYQILRGLKYIHSA--DIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMT 209
Query: 282 QYIQSRFYRSPEVLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLG 340
Y+ +R+YR+PE++L + Y++ +D+WS+GCI+ E+ TG LF G++ ++Q+ +I+ + G
Sbjct: 210 GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG 269
Query: 341 LPPKHLLD--GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXX 398
PP ++ +H+ R Y + +P + PK G+ L
Sbjct: 270 TPPASVISRMPSHEARNYINSLP------QMPKRNFADVFIGANPLA------------- 310
Query: 399 XXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 311 ---------------VDLLEKMLVLDTDKRITASEALAHPYFSQYHD 342
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 132/236 (55%), Gaps = 19/236 (8%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII---KNKKPFLNQAQIEVKLLEIMNK 174
+++YE L+G+GS+G V+K + + VAIK + K A E+KLL+ +
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ N + + K+ + LVFE + + + D L G+ + +K+ Q+
Sbjct: 84 ENLVNLLEVCKKKKRWY------LVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIING 136
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYRS 291
+ F + NIIH D+KPENIL+ + +K+ DFG + L G+ + +R+YR+
Sbjct: 137 IGFCHSH--NIIHRDIKPENILV--SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRA 192
Query: 292 PEVLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLG-LPPKH 345
PE+L+G + Y A+D+W++GC++ EM GEPLF G +++DQ+ I+ LG L P+H
Sbjct: 193 PELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRH 248
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 159/334 (47%), Gaps = 50/334 (14%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMN 173
GE+ Y +IG GSFG V +A L E VAIK + K F N+ +++++ N
Sbjct: 35 GEQREIAYTNCKVIGNGSFGVVFQA-KLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPN 93
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF--RGVSLNLTRKFSQQL 231
D+ +Y K+ ++ N LV E + +Y R+ + + + L + + QL
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLN---LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL 150
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+L ++ + + I H D+KP+N+LL +P +K++DFGS+ L G+ I SR+Y
Sbjct: 151 LRSLAYIHS--IGICHRDIKPQNLLL-DPPSGVLKLIDFGSAKILIAGEPNVSXICSRYY 207
Query: 290 RSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
R+PE++ G Y ID+WS GC++ E+ G+PLF G + +DQ+ +I++VLG P
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTP------ 261
Query: 349 GAHKTRKYFDKMPDGSYILKKPKDGRKP--KVPGSRRLHDIXXXXXXXXXXXXXXXXXHS 406
+R+ M K P+ P KV R D
Sbjct: 262 ----SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAI------------------ 299
Query: 407 VSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
DLI R+L+Y P R+T AL H FF
Sbjct: 300 --------DLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 162/359 (45%), Gaps = 57/359 (15%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN Y ++ + L RY+ IG G+ G V AFD +VA+K K +PF NQ
Sbjct: 7 DNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ LL+ +N ++ + + ++ + LV EL+ NL ++
Sbjct: 65 THAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIH---- 120
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-- 271
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG
Sbjct: 121 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 173
Query: 272 -SSCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVD 330
++C + Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ E+ G +F G++ +D
Sbjct: 174 RTACT-NFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHID 232
Query: 331 QMNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXX 389
Q NK++E LG P + T R Y + +PK PG +
Sbjct: 233 QWNKVIEQLGTPSAEFMAALQPTVRNYVEN---------------RPKYPGIK------- 270
Query: 390 XXXXXXXXXXXXXXXHSVSDYLKF---KDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
S D +K +DL+ +ML DP RI+ AL+H + D
Sbjct: 271 ---FEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYD 326
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 146/348 (41%), Gaps = 68/348 (19%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI------EVK 167
G RYE + IG G++G V KA D VA+K ++ + EV
Sbjct: 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA 63
Query: 168 LLEIMNKADVNNTYYIV------RLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSL 221
LL + + N ++ R R + LVFE + +L L G+
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREI----KVTLVFEHVDQDLRTYLDKAPPPGLPA 119
Query: 222 NLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY 281
+ +Q L FL I+H DLKPENIL+ + +K+ DFG + RIY
Sbjct: 120 ETIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILVTS--GGTVKLADFGLA-----RIY 170
Query: 282 QY-------IQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNK 334
Y + + +YR+PEVLL Y +DMWS+GCI EM +PLF G++E DQ+ K
Sbjct: 171 SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK 230
Query: 335 IVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXX 394
I +++GLPP+ D + P+ P+ G R + +
Sbjct: 231 IFDLIGLPPED----------------DWPRDVSLPRGAFPPR--GPRPVQSVVPEMEES 272
Query: 395 XXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKR 442
L+ ML ++P RI+ + ALQH++ +
Sbjct: 273 G------------------AQLLLEMLTFNPHKRISAFRALQHSYLHK 302
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 159/350 (45%), Gaps = 49/350 (14%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 45 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQ 102
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 103 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---- 158
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 159 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 211
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 212 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXX 390
NK++E LG P + T R Y + P + L PK P
Sbjct: 272 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE------- 323
Query: 391 XXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
H+ + +DL+ +ML DP RI+ ALQH +
Sbjct: 324 --------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 160/355 (45%), Gaps = 49/355 (13%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 45 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQ 102
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 103 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---- 158
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 159 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 211
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 212 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXX 390
NK++E LG P + T R Y + P + L PK P
Sbjct: 272 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE------- 323
Query: 391 XXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
H+ + +DL+ +ML DP RI+ ALQH + D
Sbjct: 324 --------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 364
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 161/367 (43%), Gaps = 65/367 (17%)
Query: 101 GYDDDNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKP 157
G D+ Y +Q + L RY+ IG G+ G V AFD +VA+K K +P
Sbjct: 1 GSHMDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRP 58
Query: 158 FLNQ-----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLR 212
F NQ A E+ LL+ +N ++ + + ++ + LV EL+ NL ++
Sbjct: 59 FQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIH 118
Query: 213 NTNFRGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVD 269
+ L+ R Q LC S IIH DLKP NI++ +KI+D
Sbjct: 119 ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILD 167
Query: 270 FG--SSCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSN 327
FG + + Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ E+ G +F G++
Sbjct: 168 FGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD 227
Query: 328 EVDQMNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKK--------PKDGRKPKV 378
+DQ NK++E LG P + T R Y + P I + P + + K+
Sbjct: 228 HIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKI 287
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHN 438
S+ +DL+ +ML DP RI+ AL+H
Sbjct: 288 KTSQA------------------------------RDLLSKMLVIDPDKRISVDEALRHP 317
Query: 439 FFKRTAD 445
+ D
Sbjct: 318 YITVWYD 324
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 160/355 (45%), Gaps = 49/355 (13%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 6 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQ 63
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 64 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---- 119
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 120 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 172
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 173 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 232
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXX 390
NK++E LG P + T R Y + P + L PK P
Sbjct: 233 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE------- 284
Query: 391 XXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
H+ + +DL+ +ML DP RI+ ALQH + D
Sbjct: 285 --------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 325
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 160/355 (45%), Gaps = 49/355 (13%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 7 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---- 120
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 173
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXX 390
NK++E LG P + T R Y + P + L PK P
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE------- 285
Query: 391 XXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
H+ + +DL+ +ML DP RI+ ALQH + D
Sbjct: 286 --------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 326
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 159/350 (45%), Gaps = 49/350 (14%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 7 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---- 120
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDXTLKILDFGLA 173
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXX 390
NK++E LG P + T R Y + P + L PK P
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE------- 285
Query: 391 XXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
H+ + +DL+ +ML DP RI+ ALQH +
Sbjct: 286 --------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 160/355 (45%), Gaps = 49/355 (13%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 8 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQ 65
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 66 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---- 121
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 122 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 174
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 175 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXX 390
NK++E LG P + T R Y + P + L PK P
Sbjct: 235 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE------- 286
Query: 391 XXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
H+ + +DL+ +ML DP RI+ ALQH + D
Sbjct: 287 --------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 327
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 160/355 (45%), Gaps = 49/355 (13%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 7 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---- 120
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 173
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXX 390
NK++E LG P + T R Y + P + L PK P
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE------- 285
Query: 391 XXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
H+ + +DL+ +ML DP RI+ ALQH + D
Sbjct: 286 --------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 326
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 160/355 (45%), Gaps = 49/355 (13%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 8 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQ 65
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 66 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---- 121
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 122 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 174
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 175 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXX 390
NK++E LG P + T R Y + P + L PK P
Sbjct: 235 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE------- 286
Query: 391 XXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
H+ + +DL+ +ML DP RI+ ALQH + D
Sbjct: 287 --------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 327
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 157/340 (46%), Gaps = 53/340 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D YEI IG G++G V A VAIK I N + A+ ++ L+I+ +
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 179 NTYYI---VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTAL 235
N I +R + + +V +L+ +L+ ++ ++ + ++L R F QL L
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLYQLLRGL 171
Query: 236 LFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR-------IYQYIQSRF 288
++ + + +IH DLKP N+L+ + +KI DFG + L + +Y+ +R+
Sbjct: 172 KYMHSAQ--VIHRDLKPSNLLVN--ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 289 YRSPEVLLGI-PYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L + Y AID+WS+GCI EM LF G N V Q+ I+ VLG P ++
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287
Query: 348 D--GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
GA + R Y +P ++P + PG+ R
Sbjct: 288 QAVGAERVRAYIQSLPP-----RQPVPW-ETVYPGADR---------------------- 319
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
+ L+ RML ++P RI+ AL+H F + D
Sbjct: 320 ------QALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 353
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 160/355 (45%), Gaps = 49/355 (13%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 1 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQ 58
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 59 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---- 114
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 115 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 167
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 168 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXX 390
NK++E LG P + T R Y + P + L PK P
Sbjct: 228 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE------- 279
Query: 391 XXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
H+ + +DL+ +ML DP RI+ ALQH + D
Sbjct: 280 --------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 320
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 161/363 (44%), Gaps = 65/363 (17%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G V A+D + +VAIK K +PF NQ
Sbjct: 12 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQ 69
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + ++ + +V EL+ NL +++
Sbjct: 70 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---- 125
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 126 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 178
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 179 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 238
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPD-GSYILKK-------PKDGRKPKVPGSR 382
NK++E LG P + T R Y + P Y +K P D K+ S+
Sbjct: 239 WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 298
Query: 383 RLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKR 442
+DL+ +ML D RI+ ALQH +
Sbjct: 299 A------------------------------RDLLSKMLVIDASKRISVDEALQHPYINV 328
Query: 443 TAD 445
D
Sbjct: 329 WYD 331
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 156/340 (45%), Gaps = 53/340 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D YEI IG G++G V A VAIK I N + A+ ++ L+I+ +
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 179 NTYYI---VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTAL 235
N I +R + + +V +L+ +L+ ++ ++ + ++L R F QL L
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLYQLLRGL 172
Query: 236 LFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR-------IYQYIQSRF 288
++ + + +IH DLKP N+L+ + +KI DFG + L + +Y+ +R+
Sbjct: 173 KYMHSAQ--VIHRDLKPSNLLVN--ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 289 YRSPEVLLGI-PYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L + Y AID+WS+GCI EM LF G N V Q+ I+ VLG P ++
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 288
Query: 348 D--GAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
GA + R Y +P ++P PG+ R
Sbjct: 289 QAVGAERVRAYIQSLPP-----RQPVPWET-VYPGADR---------------------- 320
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
+ L+ RML ++P RI+ AL+H F + D
Sbjct: 321 ------QALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 354
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 159/350 (45%), Gaps = 49/350 (14%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 7 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---- 120
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDXTLKILDFGLA 173
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXX 390
NK++E LG P + T R Y + P + L PK P
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE------- 285
Query: 391 XXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
H+ + +DL+ +ML DP RI+ ALQH +
Sbjct: 286 --------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 161/363 (44%), Gaps = 65/363 (17%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G V A+D + +VAIK K +PF NQ
Sbjct: 1 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQ 58
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + ++ + +V EL+ NL +++
Sbjct: 59 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---- 114
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 115 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 167
Query: 274 CQLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 168 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 227
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPD-GSYILKK-------PKDGRKPKVPGSR 382
NK++E LG P + T R Y + P Y +K P D K+ S+
Sbjct: 228 WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 287
Query: 383 RLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKR 442
+DL+ +ML D RI+ ALQH +
Sbjct: 288 A------------------------------RDLLSKMLVIDASKRISVDEALQHPYINV 317
Query: 443 TAD 445
D
Sbjct: 318 WYD 320
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 135/271 (49%), Gaps = 27/271 (9%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G V A+D + +VAIK K +PF NQ
Sbjct: 7 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + ++ + +V EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---- 120
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 173
Query: 274 CQLGQRIYQY--IQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G + +R+YR+PEV+LG+ Y +D+WS+GCI+ EM G LF G++ +DQ
Sbjct: 174 RTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 233
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMP 361
NK++E LG P + T R Y + P
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRTYVENRP 264
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 161/349 (46%), Gaps = 47/349 (13%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 7 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---- 120
Query: 217 RGVSLNLTRK--FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSC 274
+ L+ R Q+ + L + IIH DLKP NI++ + +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLXGIKHLHSA--GIIHRDLKPSNIVVKS--DXTLKILDFGLAR 174
Query: 275 QLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQM 332
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 333 NKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXX 391
NK++E LG P + T R Y + P + L PK P
Sbjct: 235 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE-------- 285
Query: 392 XXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
H+ + +DL+ +ML DP RI+ ALQH +
Sbjct: 286 -------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 161/349 (46%), Gaps = 47/349 (13%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 7 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---- 120
Query: 217 RGVSLNLTRK--FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSC 274
+ L+ R Q+ + L + IIH DLKP NI++ + +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLXGIKHLHSA--GIIHRDLKPSNIVVKS--DXTLKILDFGLAR 174
Query: 275 QLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQM 332
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 333 NKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXX 391
NK++E LG P + T R Y + P + L PK P
Sbjct: 235 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE-------- 285
Query: 392 XXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
H+ + +DL+ +ML DP RI+ ALQH +
Sbjct: 286 -------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 22/236 (9%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNK 174
+DRY + +G+G++G+V KA D VAIK I+ ++ A EV LL+ +
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLL-RNTNFRGVSLNLTRKFSQQLCT 233
+ I+ LK + L L+FE +L + +N + VS+ + + F QL
Sbjct: 93 RN------IIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPD---VSMRVIKSFLYQLIN 143
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRS---AIKIVDFGSSCQLGQRIYQY---IQSR 287
+ F + +H DLKP+N+LL S +KI DFG + G I Q+ I +
Sbjct: 144 GVNFCHS--RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITL 201
Query: 288 FYRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLP 342
+YR PE+LLG Y ++D+WS+ CI EM PLF G +E+DQ+ KI EVLGLP
Sbjct: 202 WYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLP 257
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 150/335 (44%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L +++++ + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF---LIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + S +KI+DFG + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 159/354 (44%), Gaps = 49/354 (13%)
Query: 106 NHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ- 161
N Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 2 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQT 59
Query: 162 ----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFR 217
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 60 HAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----- 114
Query: 218 GVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSC 274
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 115 -MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLAR 168
Query: 275 QLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQM 332
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 169 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 228
Query: 333 NKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXX 391
NK++E LG P + T R Y + P + L PK P
Sbjct: 229 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE-------- 279
Query: 392 XXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
H+ + +DL+ +ML DP RI+ ALQH + D
Sbjct: 280 -------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 320
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 154/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 138
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + S +KI+DFG + + Y+ +R+YR+PE
Sbjct: 139 GLKYIHSAD--IIHRDLKPSN--LAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPE 194
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 255 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 283
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 284 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 159/354 (44%), Gaps = 49/354 (13%)
Query: 106 NHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ- 161
N Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 1 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQT 58
Query: 162 ----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFR 217
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 59 HAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----- 113
Query: 218 GVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSC 274
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 114 -MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLAR 167
Query: 275 QLGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQM 332
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 227
Query: 333 NKIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXX 391
NK++E LG P + T R Y + P + L PK P
Sbjct: 228 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE-------- 278
Query: 392 XXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
H+ + +DL+ +ML DP RI+ ALQH + D
Sbjct: 279 -------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 319
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 154/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 142
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + +IIH DLKP N L + S +KI+DFG + + Y+ +R+YR+PE
Sbjct: 143 GLKYIHSA--DIIHRDLKPSN--LAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPE 198
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 259 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 287
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 288 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLAFRH 82
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 83 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 138
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL S +KI DFG + + +Y+ +R+
Sbjct: 139 LKYIHSA--NVLHRDLKPSNLLLNT--TSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 255 NCGINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 286
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + + D
Sbjct: 287 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYD 320
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K KPF + E++LL+ M
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSKPFQSIIHAKRTYRELRLLKHMK 91
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 148
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 149 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 204
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 264
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 265 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 293
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 294 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 143
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + +IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 144 GLKYIHSA--DIIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 260 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 288
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 289 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 161/353 (45%), Gaps = 47/353 (13%)
Query: 106 NHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ- 161
N Y ++ G+ L RY+ IG G+ G V A+D +VAIK K +PF NQ
Sbjct: 1 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQT 58
Query: 162 ----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFR 217
A E+ L++ +N ++ + + ++ + LV EL+ NL +++
Sbjct: 59 HAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ----- 113
Query: 218 GVSLNLTRK--FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 275
+ L+ R Q+ + L + IIH DLKP NI++ + +KI+DFG +
Sbjct: 114 -MELDHERMSYLLYQMLXGIKHLHSA--GIIHRDLKPSNIVVKS--DXTLKILDFGLART 168
Query: 276 LGQRIYQ--YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMN 333
G Y+ +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ N
Sbjct: 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 228
Query: 334 KIVEVLGLPPKHLLDGAHKT-RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXX 392
K++E LG P + T R Y + P + L PK P
Sbjct: 229 KVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG-LTFPKLFPDSLFPADSE--------- 278
Query: 393 XXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
H+ + +DL+ +ML DP RI+ ALQH + D
Sbjct: 279 ------------HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 319
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 143
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + +IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 144 GLKYIHSA--DIIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 260 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 288
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 289 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 159/358 (44%), Gaps = 65/358 (18%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G V A+D + +VAIK K +PF NQ
Sbjct: 7 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + ++ + +V EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---- 120
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 173
Query: 274 CQLGQRIYQY--IQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G + +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 174 RTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 233
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPD-GSYILKK-------PKDGRKPKVPGSR 382
NK++E LG P + T R Y + P Y +K P D K+ S+
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 383 RLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
+DL+ +ML D RI+ ALQH +
Sbjct: 294 A------------------------------RDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 150/335 (44%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN-----QAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF---LIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S IG G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 141
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 142 GLKYIHSAD--IIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 197
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 258 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 286
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 287 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 143
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + +IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 144 GLKYIHSA--DIIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 260 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 288
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 289 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 149/335 (44%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF---LIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 154/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN-----QAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + + E++LL+ M
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 102
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 159
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 160 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPE 215
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 275
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 276 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 304
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 305 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 336
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLL-GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 90
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 147
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 148 GLKYIHSAD--IIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 203
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 263
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 264 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 292
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 293 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 324
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 130/253 (51%), Gaps = 37/253 (14%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G++G V A+D + VA+K K +PF Q+ I + TY +RL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPF--QSLIHAR-----------RTYRELRL 80
Query: 187 KRHFMWRNHLCL--VFELLSY--NLYDLLRNTNFRGVSLN-------LTRKFSQ----QL 231
+H N + L VF + + ++ T G LN L+ + Q QL
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQL 140
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRS 291
L ++ + IIH DLKP N+ + + S ++I+DFG + Q + + Y+ +R+YR+
Sbjct: 141 LRGLKYIHSA--GIIHRDLKPSNVAVN--EDSELRILDFGLARQADEEMTGYVATRWYRA 196
Query: 292 PEVLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD-- 348
PE++L + Y+ +D+WS+GCI+ E+ G+ LF GS+ +DQ+ +I+EV+G P +L
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 256
Query: 349 GAHKTRKYFDKMP 361
+ R Y +P
Sbjct: 257 SSEHARTYIQSLP 269
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 154/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN-----QAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + + E++LL+ M
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 142
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 143 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 198
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 259 ESARNYIQSLT------QMPKMNFANVFIGANPL-------------------------- 286
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 287 --AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 138
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 139 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 194
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 255 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 283
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 284 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 141
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 142 GLKYIHSAD--IIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 197
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 258 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 286
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 287 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 91
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 148
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 149 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 204
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 264
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 265 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 293
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 294 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 91
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 148
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 149 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 204
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 264
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 265 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 293
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 294 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 138
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 139 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 194
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 255 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 283
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 284 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 159/358 (44%), Gaps = 65/358 (18%)
Query: 105 DNHDYIIQHGEK---FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ 161
DN+ Y ++ G+ L RY+ IG G+ G V A+D + +VAIK K +PF NQ
Sbjct: 7 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQ 64
Query: 162 -----AQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
A E+ L++ +N ++ + ++ + +V EL+ NL +++
Sbjct: 65 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---- 120
Query: 217 RGVSLNLTRK---FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ L+ R Q LC S IIH DLKP NI++ +KI+DFG +
Sbjct: 121 --MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVV--KSDCTLKILDFGLA 173
Query: 274 CQLGQRIYQY--IQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
G + +R+YR+PEV+LG+ Y +D+WS+GCI+ EM + LF G + +DQ
Sbjct: 174 RTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQ 233
Query: 332 MNKIVEVLGLPPKHLLDGAHKT-RKYFDKMPD-GSYILKK-------PKDGRKPKVPGSR 382
NK++E LG P + T R Y + P Y +K P D K+ S+
Sbjct: 234 WNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 383 RLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
+DL+ +ML D RI+ ALQH +
Sbjct: 294 A------------------------------RDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 99
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 156
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 157 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 212
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 273 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 301
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 302 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 142
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + +IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 143 GLKYIHSA--DIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 198
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 259 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 287
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 288 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 98
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 155
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 156 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 211
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 271
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 272 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 300
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 301 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 130/253 (51%), Gaps = 37/253 (14%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G++G V A+D + VA+K K +PF Q+ I + TY +RL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPF--QSLIHAR-----------RTYRELRL 80
Query: 187 KRHFMWRNHLCL--VFELLSY--NLYDLLRNTNFRGVSLN-------LTRKFSQ----QL 231
+H N + L VF + + ++ T G LN L+ + Q QL
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL 140
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRS 291
L ++ + IIH DLKP N+ + + S ++I+DFG + Q + + Y+ +R+YR+
Sbjct: 141 LRGLKYIHSA--GIIHRDLKPSNVAVN--EDSELRILDFGLARQADEEMTGYVATRWYRA 196
Query: 292 PEVLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD-- 348
PE++L + Y+ +D+WS+GCI+ E+ G+ LF GS+ +DQ+ +I+EV+G P +L
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 256
Query: 349 GAHKTRKYFDKMP 361
+ R Y +P
Sbjct: 257 SSEHARTYIQSLP 269
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 138
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + +IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 139 GLKYIHSA--DIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 194
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 255 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 283
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 284 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 143
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 144 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 199
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 260 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 288
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 289 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 90
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 147
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 148 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 203
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 263
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 264 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 292
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 293 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 324
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 102
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 159
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + +IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 160 GLKYIHSA--DIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 215
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 275
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 276 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 304
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 305 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 336
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 138/257 (53%), Gaps = 25/257 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIK--IIKNKKPFLNQAQI-EVKLLEIMN 173
+++YE IG+GS+G V K + + VAIK + P + + + E+++L+ +
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLC 232
++ N + R KR L LVFE + L++L R RGV +L + + Q
Sbjct: 61 HPNLVNLLEVFRRKRR------LHLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTL 112
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFY 289
A+ F + N IH D+KPENIL+ K S IK+ DFG + L Y + +R+Y
Sbjct: 113 QAVNFCH--KHNCIHRDVKPENILIT--KHSVIKLCDFGFARLLTGPSDYYDDEVATRWY 168
Query: 290 RSPEVLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLG-LPPKHLL 347
RSPE+L+G Y +D+W++GC+ E+ +G PL+ G ++VDQ+ I + LG L P+H
Sbjct: 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRH-- 226
Query: 348 DGAHKTRKYFD--KMPD 362
T +YF K+PD
Sbjct: 227 QQVFSTNQYFSGVKIPD 243
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 154/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN-----QAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + + E++LL+ M
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 141
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 142 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 197
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 258 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 286
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 287 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 141
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 142 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 197
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 258 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 286
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 287 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 154/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN-----QAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + + E++LL+ M
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 78
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 79 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 135
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 136 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 191
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 251
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 252 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 280
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 281 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 312
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 132
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 133 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 188
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 249 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 277
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 278 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 76
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 133
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 134 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 189
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 249
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 250 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 278
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 279 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 310
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 76
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 133
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 134 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 189
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 249
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 250 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 278
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 279 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 310
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 77
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 78 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 134
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 135 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 190
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 250
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 251 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 279
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 280 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 311
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 154/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN-----QAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + + E++LL+ M
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 142
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 143 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 198
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 259 ESARNYIQSLA------QMPKMNFANVFIGANPL-------------------------- 286
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 287 --AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 99
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 156
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 157 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 212
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 273 ESARNYIQSLA------QMPKMNFANVFIGANPLA------------------------- 301
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 302 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 149/335 (44%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + Q+
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF---LIYQILR 132
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 133 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 188
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 249 ESARNYIQSLA------QMPKMNFANVFIGANPLA------------------------- 277
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 278 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLA------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 154/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN-----QAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + + E++LL+ M
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 98
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 155
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 156 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 211
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 271
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 272 ESARNYIQSLA------QMPKMNFANVFIGANPLA------------------------- 300
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 301 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 157/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 100
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + LV L+ +LY LL+ + +S + F Q+
Sbjct: 101 ENIIGINDIIRAPTIEQMKD-VYLVTHLMGADLYKLLKTQH---LSNDHICYFLYQILRG 156
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 157 LKYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 273 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 304
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 305 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 338
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 132
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 133 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 188
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 249 ESARNYIQSLA------QMPKMNFANVFIGANPLA------------------------- 277
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 278 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 157/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLAFRH 82
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 83 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 138
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 139 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 255 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 286
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + + D
Sbjct: 287 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYD 320
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+D+G + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ + +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 89
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 90 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 146
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + Y+ +R+YR+PE
Sbjct: 147 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 202
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 262
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 263 ESARNYIQSLA------QMPKMNFANVFIGANPLA------------------------- 291
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 292 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 323
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 81 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 136
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 137 LKYIHSA--NVLHRDLKPSNLLLNT--TXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 253 NXIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 284
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 285 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 81 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 136
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 137 LKYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 253 NXIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 284
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 285 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 82
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 83 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 138
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 139 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 255 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 286
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 287 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 320
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 151/330 (45%), Gaps = 51/330 (15%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHV--AIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+++Y IG+G++G V KA + + I++ K + + E+ +L+ + +
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 176 DVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTAL 235
++ Y ++ K+ L LVFE L +L LL + G+ + F QL +
Sbjct: 61 NIVKLYDVIHTKKR------LVLVFEHLDQDLKKLL-DVCEGGLESVTAKSFLLQLLNGI 113
Query: 236 LFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSP 292
+ + ++H DLKP+N+L+ + +KI DFG + G + +Y I + +YR+P
Sbjct: 114 AYCH--DRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAP 169
Query: 293 EVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAH 351
+VL+G Y ID+WS+GCI EM G PLF G +E DQ+ +I +LG P
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229
Query: 352 KTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYL 411
+ KY D ++ + +P +P L +
Sbjct: 230 ELPKY-----DPNFTVYEP-------LPWESFLKGLDESGI------------------- 258
Query: 412 KFKDLIFRMLDYDPKTRITPYYALQHNFFK 441
DL+ +ML DP RIT AL+H +FK
Sbjct: 259 ---DLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 100
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 101 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 156
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 157 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 273 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 304
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 305 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 338
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 81 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 136
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 137 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 253 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 284
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 285 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 88
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 89 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 144
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 145 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 260
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 261 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 292
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 293 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 326
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 81 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 136
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 137 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 253 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 284
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 285 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 81 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 136
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 137 LKYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 253 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 284
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 285 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYXQRTLREIKILLRFRH 84
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 85 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 140
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 141 LKYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 257 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 288
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 289 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + ++ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLA------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 85 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 140
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 141 LKYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 257 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 288
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 289 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 78
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 79 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 134
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 135 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 250
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 251 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 282
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 283 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 316
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 151/330 (45%), Gaps = 51/330 (15%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHV--AIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+++Y IG+G++G V KA + + I++ K + + E+ +L+ + +
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 176 DVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTAL 235
++ Y ++ K+ L LVFE L +L LL + G+ + F QL +
Sbjct: 61 NIVKLYDVIHTKKR------LVLVFEHLDQDLKKLL-DVCEGGLESVTAKSFLLQLLNGI 113
Query: 236 LFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSP 292
+ + ++H DLKP+N+L+ + +KI DFG + G + +Y + + +YR+P
Sbjct: 114 AYCH--DRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAP 169
Query: 293 EVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAH 351
+VL+G Y ID+WS+GCI EM G PLF G +E DQ+ +I +LG P
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229
Query: 352 KTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYL 411
+ KY D ++ + +P +P L +
Sbjct: 230 ELPKY-----DPNFTVYEP-------LPWESFLKGLDESGI------------------- 258
Query: 412 KFKDLIFRMLDYDPKTRITPYYALQHNFFK 441
DL+ +ML DP RIT AL+H +FK
Sbjct: 259 ---DLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 85
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 86 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 141
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 142 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 257
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 258 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 289
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 290 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 323
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 86
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 87 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 142
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 143 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 258
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 259 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 290
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 291 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 324
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 77
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 78 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 133
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 134 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 249
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 250 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 281
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 282 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 315
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 85 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 140
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 141 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 257 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 288
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 289 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 78
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 79 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 134
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 135 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDL 250
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 251 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 282
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 283 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 316
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 132
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + ++ +R+YR+PE
Sbjct: 133 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPE 188
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 249 ESARNYIQSLA------QMPKMNFANVFIGANPLA------------------------- 277
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 278 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + ++ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 151/330 (45%), Gaps = 51/330 (15%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHV--AIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+++Y IG+G++G V KA + + I++ K + + E+ +L+ + +
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 176 DVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTAL 235
++ Y ++ K+ L LVFE L +L LL + G+ + F QL +
Sbjct: 61 NIVKLYDVIHTKKR------LVLVFEHLDQDLKKLL-DVCEGGLESVTAKSFLLQLLNGI 113
Query: 236 LFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSP 292
+ + ++H DLKP+N+L+ + +KI DFG + G + +Y + + +YR+P
Sbjct: 114 AYCH--DRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAP 169
Query: 293 EVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAH 351
+VL+G Y ID+WS+GCI EM G PLF G +E DQ+ +I +LG P
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229
Query: 352 KTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYL 411
+ KY D ++ + +P +P L +
Sbjct: 230 ELPKY-----DPNFTVYEP-------LPWESFLKGLDESGI------------------- 258
Query: 412 KFKDLIFRMLDYDPKTRITPYYALQHNFFK 441
DL+ +ML DP RIT AL+H +FK
Sbjct: 259 ---DLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 129/253 (50%), Gaps = 37/253 (14%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G++G V A+D + VA+K K +PF Q+ I + TY +RL
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPF--QSLIHAR-----------RTYRELRL 72
Query: 187 KRHFMWRNHLCL--VFELLSY--NLYDLLRNTNFRGVSLN-------LTRKFSQ----QL 231
+H N + L VF + + ++ T G LN L+ + Q QL
Sbjct: 73 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL 132
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRS 291
L ++ + IIH DLKP N+ + + ++I+DFG + Q + + Y+ +R+YR+
Sbjct: 133 LRGLKYIHSA--GIIHRDLKPSNVAVN--EDCELRILDFGLARQADEEMTGYVATRWYRA 188
Query: 292 PEVLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD-- 348
PE++L + Y+ +D+WS+GCI+ E+ G+ LF GS+ +DQ+ +I+EV+G P +L
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 248
Query: 349 GAHKTRKYFDKMP 361
+ R Y +P
Sbjct: 249 SSEHARTYIQSLP 261
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 152/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+ FG + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 152/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + + +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 85 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKCQH---LSNDHICYFLYQILRG 140
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 141 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 257 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 288
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 289 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAI+ I PF +Q E+K+L
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 85 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 140
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + +Y+ +R+
Sbjct: 141 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 257 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 288
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 289 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 152/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+D G + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 152/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 99
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 156
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DFG + + + +R+YR+PE
Sbjct: 157 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPE 212
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 273 ESARNYIQSLA------QMPKMNFANVFIGANPLA------------------------- 301
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 302 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN-----QAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+D G + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN-----QAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+D G + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 152/335 (45%), Gaps = 51/335 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-----LNQAQIEVKLLEIMN 173
+RY+ S +G G++G V AFD + VA+K K +PF + E++LL+ M
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V + R N + LV L+ +L ++++ + ++ + + Q+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILR 136
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPE 293
L ++ + + IIH DLKP N L + +KI+DF + + Y+ +R+YR+PE
Sbjct: 137 GLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPE 192
Query: 294 VLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GA 350
++L + Y+ +D+WS+GCI+ E+ TG LF G++ +DQ+ I+ ++G P LL +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 351 HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDY 410
R Y + + PK G+ L
Sbjct: 253 ESARNYIQSLT------QMPKMNFANVFIGANPLA------------------------- 281
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
DL+ +ML D RIT AL H +F + D
Sbjct: 282 ---VDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 153/340 (45%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEI-----MNK 174
RY IG+G++G V A+D + VAIK I PF +Q + L EI
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS---PFEHQTYCQRTLREIQILLRFRH 100
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
+V I+R R+ + +V +L+ +LY LL++ +S + F Q+
Sbjct: 101 ENVIGIRDILRASTLEAMRD-VYIVQDLMETDLYKLLKSQQ---LSNDHICYFLYQILRG 156
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+L+ +KI DFG + + + + +R+
Sbjct: 157 LKYIHSA--NVLHRDLKPSNLLINT--TCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K K P S
Sbjct: 273 NCIINMKARNYLQSLP------SKTKVAWAKLFPKSDS---------------------- 304
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ RML ++P RIT AL H + ++ D
Sbjct: 305 ------KALDLLDRMLTFNPNKRITVEEALAHPYLEQYYD 338
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 157/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 85 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 140
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + + + +R+
Sbjct: 141 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 257 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 288
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 289 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 157/340 (46%), Gaps = 59/340 (17%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIMNK 174
RY S IG+G++G V A+D + VAIK I PF +Q E+K+L
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 85
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++ I+R ++ + +V +L+ +LY LL+ + +S + F Q+
Sbjct: 86 ENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 141
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRF 288
L ++ + N++H DLKP N+LL +KI DFG + + + + +R+
Sbjct: 142 LKYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLL 347
YR+PE++L Y +ID+WS+GCIL EM + P+F G + +DQ+N I+ +LG P + L
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 257
Query: 348 DGA--HKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXH 405
+ K R Y +P K KVP +R +
Sbjct: 258 NCIINLKARNYLLSLP------------HKNKVPWNRLFPNADS---------------- 289
Query: 406 SVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ +ML ++P RI AL H + ++ D
Sbjct: 290 ------KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 323
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 145/328 (44%), Gaps = 62/328 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G++G V A D VAIK K +PF Q++I K Y + L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIK--KLSRPF--QSEIFAK-----------RAYRELLL 76
Query: 187 KRHFMWRNHLCL--VFELLSY--NLYDLLRNTNFRGVSLN--LTRKFSQQLCTALLFLST 240
+H N + L VF S N YD F L + KFS++ L++
Sbjct: 77 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQML 136
Query: 241 PEL------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEV 294
L ++H DLKP N L + +KI+DFG + + Y+ +R+YR+PEV
Sbjct: 137 KGLKYIHSAGVVHRDLKPGN--LAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEV 194
Query: 295 LLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKT 353
+L + Y+ +D+WS+GCI+ EM TG+ LF G + +DQ+ +I++V G+P G
Sbjct: 195 ILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP------GTEFV 248
Query: 354 RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF 413
+K DK SYI P+ RK R +
Sbjct: 249 QKLNDKAAK-SYIQSLPQTPRKDFTQLFPRASP-------------------------QA 282
Query: 414 KDLIFRMLDYDPKTRITPYYALQHNFFK 441
DL+ +ML+ D R+T AL H FF+
Sbjct: 283 ADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 160/341 (46%), Gaps = 66/341 (19%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEI 171
+ +++Y+ +G+G++G V KA D + + VA+K I+ + + A E+ LL+
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQL 231
++ ++ + ++ +R L LVFE + +L +L + N G+ + + + QL
Sbjct: 76 LHHPNIVSLIDVIHSERC------LTLVFEFMEKDLKKVL-DENKTGLQDSQIKIYLYQL 128
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRF 288
+ + I+H DLKP+N+L+ + A+K+ DFG + G + Y + + +
Sbjct: 129 LRGVAHCH--QHRILHRDLKPQNLLINS--DGALKLADFGLARAFGIPVRSYTHEVVTLW 184
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLP----- 342
YR+P+VL+G Y ++D+WS+GCI EM TG+PLF G + DQ+ KI +LG P
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW 244
Query: 343 --PKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXX 400
+ L +T + F+K P S I ++G
Sbjct: 245 PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEG--------------------------- 277
Query: 401 XXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFK 441
DL+ ML +DP RI+ A+ H +FK
Sbjct: 278 -------------IDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 145/328 (44%), Gaps = 62/328 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G++G V A D VAIK K +PF Q++I K Y + L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIK--KLSRPF--QSEIFAK-----------RAYRELLL 94
Query: 187 KRHFMWRNHLCL--VFELLSY--NLYDLLRNTNFRGVSLN--LTRKFSQQLCTALLFLST 240
+H N + L VF S N YD F L + +FS++ L++
Sbjct: 95 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQML 154
Query: 241 PEL------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEV 294
L ++H DLKP N L + +KI+DFG + + Y+ +R+YR+PEV
Sbjct: 155 KGLKYIHSAGVVHRDLKPGN--LAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEV 212
Query: 295 LLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKT 353
+L + Y+ +D+WS+GCI+ EM TG+ LF G + +DQ+ +I++V G+P G
Sbjct: 213 ILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP------GTEFV 266
Query: 354 RKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKF 413
+K DK SYI P+ RK R +
Sbjct: 267 QKLNDKAAK-SYIQSLPQTPRKDFTQLFPRASP-------------------------QA 300
Query: 414 KDLIFRMLDYDPKTRITPYYALQHNFFK 441
DL+ +ML+ D R+T AL H FF+
Sbjct: 301 ADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 160/341 (46%), Gaps = 66/341 (19%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEI 171
+ +++Y+ +G+G++G V KA D + + VA+K I+ + + A E+ LL+
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQL 231
++ ++ + ++ +R L LVFE + +L +L + N G+ + + + QL
Sbjct: 76 LHHPNIVSLIDVIHSERC------LTLVFEFMEKDLKKVL-DENKTGLQDSQIKIYLYQL 128
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRF 288
+ + I+H DLKP+N+L+ + A+K+ DFG + G + Y + + +
Sbjct: 129 LRGVAHCH--QHRILHRDLKPQNLLINS--DGALKLADFGLARAFGIPVRSYTHEVVTLW 184
Query: 289 YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLP----- 342
YR+P+VL+G Y ++D+WS+GCI EM TG+PLF G + DQ+ KI +LG P
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW 244
Query: 343 --PKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXX 400
+ L +T + F+K P S I ++G
Sbjct: 245 PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEG--------------------------- 277
Query: 401 XXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFK 441
DL+ ML +DP RI+ A+ H +FK
Sbjct: 278 -------------IDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 17/244 (6%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQ-----AQIEVKLLEIMNKADVNNTY 181
+G G++G V A D VAIK K +PF ++ A E++LL+ M +V
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIK--KLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 182 YIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+ LV + +L L+++ + Q+ L ++
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF---LVYQMLKGLRYIHAA 147
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLG-IPY 300
IIH DLKP N L + +KI+DFG + Q + + +R+YR+PEV+L + Y
Sbjct: 148 --GIIHRDLKPGN--LAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRY 203
Query: 301 DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD--GAHKTRKYFD 358
+D+WS+GCI+ EM TG+ LF GS+ +DQ+ +I++V G PP + + + + Y
Sbjct: 204 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 263
Query: 359 KMPD 362
+P+
Sbjct: 264 GLPE 267
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 124/237 (52%), Gaps = 29/237 (12%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-----NKKPFLNQAQI-EVKLLEIMN 173
RYE +G+G F V KA D VAIK IK K +N+ + E+KLL+ ++
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLT----RKFSQ 229
+ I+ L F ++++ LVF+ + +L ++++ SL LT + +
Sbjct: 71 HPN------IIGLLDAFGHKSNISLVFDFMETDLEVIIKDN-----SLVLTPSHIKAYML 119
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ--RIYQY-IQS 286
L +L + I+H DLKP N+LL + +K+ DFG + G R Y + + +
Sbjct: 120 MTLQGLEYLH--QHWILHRDLKPNNLLL--DENGVLKLADFGLAKSFGSPNRAYXHQVVT 175
Query: 287 RFYRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLP 342
R+YR+PE+L G Y + +DMW++GCIL E+ P G +++DQ+ +I E LG P
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTP 232
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 120/226 (53%), Gaps = 18/226 (7%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI----EVKLLEIM 172
F +RY I ++GKGSFG+V+K D Q A+K+I NK N+ EV+LL+ +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKL 78
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+ ++ + I+ F L EL ++++ F S + + +Q+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFD----EIIKRKRF---SEHDAARIIKQVF 131
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFG-SSC-QLGQRIYQYIQSRFY 289
+ + ++ NI+H DLKPENILL + ++ IKI+DFG S+C Q ++ I + +Y
Sbjct: 132 SGITYMHKH--NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 290 RSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
+PEVL G YD D+WS G IL + +G P F G NE D + ++
Sbjct: 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 121/226 (53%), Gaps = 18/226 (7%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI----EVKLLEIM 172
F +RY I ++GKGSFG+V+K D Q A+K+I NK N+ EV+LL+ +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKL 78
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+ ++ + I+ F L EL ++++ F S + + +Q+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFD----EIIKRKRF---SEHDAARIIKQVF 131
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFG-SSC-QLGQRIYQYIQSRFY 289
+ + ++ + NI+H DLKPENILL + ++ IKI+DFG S+C Q ++ I + +Y
Sbjct: 132 SGITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 290 RSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
+PEVL G YD D+WS G IL + +G P F G NE D + ++
Sbjct: 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 121/226 (53%), Gaps = 18/226 (7%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI----EVKLLEIM 172
F +RY I ++GKGSFG+V+K D Q A+K+I NK N+ EV+LL+ +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKL 78
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+ ++ + I+ F L EL ++++ F S + + +Q+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFD----EIIKRKRF---SEHDAARIIKQVF 131
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFG-SSC-QLGQRIYQYIQSRFY 289
+ + ++ + NI+H DLKPENILL + ++ IKI+DFG S+C Q ++ I + +Y
Sbjct: 132 SGITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 290 RSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
+PEVL G YD D+WS G IL + +G P F G NE D + ++
Sbjct: 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 148/331 (44%), Gaps = 53/331 (16%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNK 174
+ +YE IG+G++G V KA + E VA+K ++ + + + A E+ LL+ +
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
+ IVRL L LVFE +L + N + + + F QL
Sbjct: 61 KN------IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKG 113
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRS 291
L F + N++H DLKP+N+L+ + +K+ +FG + G + Y + + +YR
Sbjct: 114 LGFCHS--RNVLHRDLKPQNLLI--NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRP 169
Query: 292 PEVLLGIP-YDLAIDMWSLGCILVEM-HTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDG 349
P+VL G Y +IDMWS GCI E+ + G PLF G++ DQ+ +I +LG P
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP------- 222
Query: 350 AHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSD 409
+ K+PD KP P P + L ++
Sbjct: 223 TEEQWPSMTKLPD-----YKP----YPMYPATTSLVNVVPKLNATG-------------- 259
Query: 410 YLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
+DL+ +L +P RI+ ALQH +F
Sbjct: 260 ----RDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 147/331 (44%), Gaps = 53/331 (16%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK---NKKPFLNQAQIEVKLLEIMNK 174
+ +YE IG+G++G V KA + E VA+K ++ + + + A E+ LL+ +
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
+ IVRL L LVFE +L + N + + + F QL
Sbjct: 61 KN------IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKG 113
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRS 291
L F + N++H DLKP+N+L+ + +K+ DFG + G + Y + + +YR
Sbjct: 114 LGFCHS--RNVLHRDLKPQNLLI--NRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRP 169
Query: 292 PEVLLGIP-YDLAIDMWSLGCILVEM-HTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDG 349
P+VL G Y +IDMWS GCI E+ + PLF G++ DQ+ +I +LG P
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTP------- 222
Query: 350 AHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSD 409
+ K+PD KP P P + L ++
Sbjct: 223 TEEQWPSMTKLPD-----YKP----YPMYPATTSLVNVVPKLNATG-------------- 259
Query: 410 YLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
+DL+ +L +P RI+ ALQH +F
Sbjct: 260 ----RDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 36/252 (14%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
L +YE+ +GKG++G V K+ D VA+K I + F N + EIM ++
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD--AFQNSTDAQRTFREIMILTEL 65
Query: 178 NNTYYIVRLKRHFMWRNH--LCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTAL 235
+ IV L N + LVF+ + +L+ ++R V + QL +
Sbjct: 66 SGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH---KQYVVYQLIKVI 122
Query: 236 LFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG--QRIYQ----------- 282
+L + L +H D+KP NILL +K+ DFG S +R+
Sbjct: 123 KYLHSGGL--LHRDMKPSNILL--NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTE 178
Query: 283 -----------YIQSRFYRSPEVLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVD 330
Y+ +R+YR+PE+LLG Y IDMWSLGCIL E+ G+P+F GS+ ++
Sbjct: 179 NFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238
Query: 331 QMNKIVEVLGLP 342
Q+ +I+ V+ P
Sbjct: 239 QLERIIGVIDFP 250
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 168/345 (48%), Gaps = 54/345 (15%)
Query: 105 DNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI 164
D ++++ G + D Y++ +G+G + +V +A ++ V +KI+K K N+ +
Sbjct: 25 DYASHVVEWGNQ--DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--NKIKR 80
Query: 165 EVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLT 224
E+K+LE + N + + + + R LVFE ++ NT+F+ + LT
Sbjct: 81 EIKILENLRGGP--NIITLADIVKDPVSRT-PALVFEHVN--------NTDFKQLYQTLT 129
Query: 225 ----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS--CQLGQ 278
R + ++ AL + + + I+H D+KP N+++ + R ++++D+G + GQ
Sbjct: 130 DYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRK-LRLIDWGLAEFYHPGQ 186
Query: 279 RIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HTGEPLFSGSNEVDQMNKIV 336
+ SR+++ PE+L+ YD ++DMWSLGC+L M EP F G + DQ+ +I
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 337 EVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXX 396
+VLG + L D K D P + IL GR + R +H
Sbjct: 247 KVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRKRWERFVH----------- 286
Query: 397 XXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
H VS + L F D ++L YD ++R+T A++H +F
Sbjct: 287 ----SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEHPYF 324
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 18/236 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII---KNKKPFLNQAQIEVKLLEIMNK 174
+ +YE + IG+G+FG+V KA + VA+K + K+ F A E+K+L+++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+V N I R K + + + LVF+ ++L LL N + +L+ ++ Q L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQMLL 135
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-------QRIYQYIQ 285
L ++ + I+H D+K N+L+ + +K+ DFG + R +
Sbjct: 136 NGLYYIHRNK--ILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 286 SRFYRSPEVLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLG 340
+ +YR PE+LLG Y ID+W GCI+ EM T P+ G+ E Q+ I ++ G
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 247
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 18/236 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII---KNKKPFLNQAQIEVKLLEIMNK 174
+ +YE + IG+G+FG+V KA + VA+K + K+ F A E+K+L+++
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+V N I R K + + + LVF+ ++L LL N + +L+ ++ Q L
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQMLL 134
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-------QRIYQYIQ 285
L ++ + I+H D+K N+L+ + +K+ DFG + R +
Sbjct: 135 NGLYYIHRNK--ILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 286 SRFYRSPEVLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLG 340
+ +YR PE+LLG Y ID+W GCI+ EM T P+ G+ E Q+ I ++ G
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 246
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 18/236 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII---KNKKPFLNQAQIEVKLLEIMNK 174
+ +YE + IG+G+FG+V KA + VA+K + K+ F A E+K+L+++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+V N I R K + + + LVF+ ++L LL N + +L+ ++ Q L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQMLL 135
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-------QRIYQYIQ 285
L ++ + I+H D+K N+L+ + +K+ DFG + R +
Sbjct: 136 NGLYYIHRNK--ILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 286 SRFYRSPEVLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLG 340
+ +YR PE+LLG Y ID+W GCI+ EM T P+ G+ E Q+ I ++ G
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 247
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 118/230 (51%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E IG GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + +++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ IK+ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 118/230 (51%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E IG GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + +++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ IK+ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 111 IQHGEK-FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLL 169
+QH F DRY+ ++GKGSFG+V+ D A+K+I +K+ + E L
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLR 98
Query: 170 EI--MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYD-LLRNTNFRGVSLNLTR 225
E+ + + D N I++L F + + LV E+ + L+D ++ F V
Sbjct: 99 EVQLLKQLDHPN---IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AA 152
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSC--QLGQRIYQ 282
+ +Q+ + + ++ + I+H DLKPEN+LL + + A I+I+DFG S + +++
Sbjct: 153 RIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 210
Query: 283 YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
I + +Y +PEVL G YD D+WS G IL + +G P F+G+NE D + K+
Sbjct: 211 KIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 262
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 111 IQHGEK-FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLL 169
+QH F DRY+ ++GKGSFG+V+ D A+K+I +K+ + E L
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLR 99
Query: 170 EI--MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYD-LLRNTNFRGVSLNLTR 225
E+ + + D N I++L F + + LV E+ + L+D ++ F V
Sbjct: 100 EVQLLKQLDHPN---IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AA 153
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSC--QLGQRIYQ 282
+ +Q+ + + ++ + I+H DLKPEN+LL + + A I+I+DFG S + +++
Sbjct: 154 RIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 211
Query: 283 YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
I + +Y +PEVL G YD D+WS G IL + +G P F+G+NE D + K+
Sbjct: 212 KIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 263
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 18/236 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII---KNKKPFLNQAQIEVKLLEIMNK 174
+ +YE + IG+G+FG+V KA + VA+K + K+ F A E+K+L+++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+V N I R K + + + LVF+ ++L LL N + +L+ ++ Q L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQMLL 135
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-------QRIYQYIQ 285
L ++ + I+H D+K N+L+ + +K+ DFG + R +
Sbjct: 136 NGLYYIHRNK--ILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 286 SRFYRSPEVLLG-IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLG 340
+ +YR PE+LLG Y ID+W GCI+ EM T P+ G+ E Q+ I ++ G
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 247
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 111 IQHGEK-FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLL 169
+QH F DRY+ ++GKGSFG+V+ D A+K+I +K+ + E L
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLR 75
Query: 170 EI--MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYD-LLRNTNFRGVSLNLTR 225
E+ + + D N I++L F + + LV E+ + L+D ++ F V
Sbjct: 76 EVQLLKQLDHPN---IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AA 129
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSC--QLGQRIYQ 282
+ +Q+ + + ++ + I+H DLKPEN+LL + + A I+I+DFG S + +++
Sbjct: 130 RIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 187
Query: 283 YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
I + +Y +PEVL G YD D+WS G IL + +G P F+G+NE D + K+
Sbjct: 188 KIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 124/233 (53%), Gaps = 18/233 (7%)
Query: 111 IQHGEK-FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLL 169
+QH F DRY+ ++GKGSFG+V+ D A+K+I +K+ + E L
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLR 81
Query: 170 EI--MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYD-LLRNTNFRGVSLNLTR 225
E+ + + D N I++L F + + LV E+ + L+D ++ F V
Sbjct: 82 EVQLLKQLDHPN---IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AA 135
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQL--GQRIYQ 282
+ +Q+ + + ++ + I+H DLKPEN+LL + + A I+I+DFG S +++
Sbjct: 136 RIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 193
Query: 283 YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
I + +Y +PEVL G YD D+WS G IL + +G P F+G+NE D + K+
Sbjct: 194 KIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 245
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E IG GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ IK+ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 119/233 (51%), Gaps = 18/233 (7%)
Query: 111 IQHGEK-FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNK--KPFLNQAQI--E 165
+QH F DRY+ ++GKGSFG+V+ D A+K+I + K ++ + E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 166 VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTR 225
V+LL+ ++ ++ Y K +F + EL +++ F V
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFD----EIISRKRFSEVD---AA 129
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSC--QLGQRIYQ 282
+ +Q+ + + + + I+H DLKPEN+LL + + A I+I+DFG S + ++
Sbjct: 130 RIIRQVLSGITYXHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKD 187
Query: 283 YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
I + +Y +PEVL G YD D+WS G IL + +G P F+G+NE D + K+
Sbjct: 188 KIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 153/344 (44%), Gaps = 61/344 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK--NKKPFLNQAQIEVKLLEIMNKADVN 178
+++ SL+G+G++G V A VAIK I+ +K F + E+K+L+ ++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFL 238
+ I R F N + ++ EL+ +L+ R + + +S + + F Q A+ L
Sbjct: 73 TIFNIQR-PDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 239 STPELNIIHCDLKPENILLCNPKRSAIKIVDFG-----------SSCQLGQR--IYQYIQ 285
N+IH DLKP N+L+ + +K+ DFG +S GQ+ + +Y+
Sbjct: 129 HGS--NVIHRDLKPSNLLINS--NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 286 SRFYRSPEVLL-GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPK 344
+R+YR+PEV+L Y A+D+WS GCIL E+ P+F G + Q+ I ++G P
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 345 H---LLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXX 401
+ + R+Y +P P P + +
Sbjct: 245 DNDLRCIESPRAREYIKSLP------------MYPAAPLEKMFPRVNP------------ 280
Query: 402 XXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ RML +DP RIT AL+H + + D
Sbjct: 281 ----------KGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 118/230 (51%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF----LNQAQIEVKLL 169
GEK D +++ +L+GKGSF V +A + VAIK+I K + + + Q EVK+
Sbjct: 7 GEKIED-FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQ 229
+ I+ L +F N++ LV E+ + + S N R F
Sbjct: 66 CQLKHPS------ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH 119
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQYIQS 286
Q+ T +L+L + I+H DL N+LL + IKI DFG + QL ++ Y +
Sbjct: 120 QIITGMLYLHSH--GILHRDLTLSNLLLT--RNMNIKIADFGLATQLKMPHEKHYTLCGT 175
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV 336
Y SPE+ + L D+WSLGC+ + G P F + +NK+V
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 117/229 (51%), Gaps = 17/229 (7%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK--NKKPFLNQAQIEVKLLEIMNKADVNNTYYIV 184
+G+G++ V K VA+K I+ +++ A EV LL+ + A++ + I+
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 185 RLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN 244
++ L LVFE L +L L + ++++ + F QL L + +
Sbjct: 70 HTEKS------LTLVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQK-- 120
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIY-QYIQSRFYRSPEVLLG-IPY 300
++H DLKP+N+L+ +R +K+ DFG + + + Y + + +YR P++LLG Y
Sbjct: 121 VLHRDLKPQNLLI--NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDY 178
Query: 301 DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDG 349
IDMW +GCI EM TG PLF GS +Q++ I +LG P + G
Sbjct: 179 STQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPG 227
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ E H A+KI+ +K+ + QIE L E + V
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRIQQAV 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ LR S R ++ Q+
Sbjct: 100 NFPF-LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ IK+ DFG + ++ R + + Y +PE++L
Sbjct: 157 YLHS--LDLIYRDLKPENLLI--DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 262
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 100 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 157 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIIL 212
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 262
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 100 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 157 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 262
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+++ ++ IK+ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 84
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 85 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 141
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 142 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIIL 197
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 247
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 153/344 (44%), Gaps = 61/344 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK--NKKPFLNQAQIEVKLLEIMNKADVN 178
+++ SL+G+G++G V A VAIK I+ +K F + E+K+L+ ++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFL 238
+ I R F N + ++ EL+ +L+ R + + +S + + F Q A+ L
Sbjct: 73 TIFNIQR-PDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 239 STPELNIIHCDLKPENILLCNPKRSAIKIVDFG-----------SSCQLGQR--IYQYIQ 285
N+IH DLKP N+L+ + +K+ DFG +S GQ+ + +++
Sbjct: 129 HGS--NVIHRDLKPSNLLINS--NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 286 SRFYRSPEVLL-GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPK 344
+R+YR+PEV+L Y A+D+WS GCIL E+ P+F G + Q+ I ++G P
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 345 H---LLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXX 401
+ + R+Y +P P P + +
Sbjct: 245 DNDLRCIESPRAREYIKSLP------------MYPAAPLEKMFPRVNP------------ 280
Query: 402 XXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ RML +DP RIT AL+H + + D
Sbjct: 281 ----------KGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+++ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLMI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 115/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + + +L+ F ++L +V E ++ LR S R ++ Q+
Sbjct: 100 NFPF-LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+++ ++ IK+ DFG + ++ R + + Y +PE++L
Sbjct: 157 YLHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 262
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 119
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 120 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 176
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 177 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 232
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 282
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 115/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + + +L+ F ++L +V E ++ LR S R ++ Q+
Sbjct: 100 NFPF-LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+++ ++ IK+ DFG + ++ R + + Y +PE++L
Sbjct: 157 YLHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 262
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + +IE L E V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKEIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+++ ++ IK+ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 100 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 157 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 262
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 115/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ LR S R ++ Q+
Sbjct: 100 NFPF-LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+++ ++ IK+ DFG + ++ R + + Y +PE++L
Sbjct: 157 YLHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 262
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 100 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 157 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 262
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR R ++ Q+
Sbjct: 100 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFE 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 157 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 262
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 100 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 157 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 262
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 91
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR S R ++ Q+
Sbjct: 92 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 148
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 149 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 204
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 254
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 115/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ LR R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+++ ++ IK+ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 152/344 (44%), Gaps = 61/344 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK--NKKPFLNQAQIEVKLLEIMNKADVN 178
+++ SL+G+G++G V A VAIK I+ +K F + E+K+L+ ++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFL 238
+ I R F N + ++ EL+ +L+ R + + +S + + F Q A+ L
Sbjct: 73 TIFNIQR-PDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 239 STPELNIIHCDLKPENILLCNPKRSAIKIVDFG-----------SSCQLGQR--IYQYIQ 285
N+IH DLKP N+L+ + +K+ DFG +S GQ+ + + +
Sbjct: 129 HGS--NVIHRDLKPSNLLINS--NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 286 SRFYRSPEVLL-GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPK 344
+R+YR+PEV+L Y A+D+WS GCIL E+ P+F G + Q+ I ++G P
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 345 H---LLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXX 401
+ + R+Y +P P P + +
Sbjct: 245 DNDLRCIESPRAREYIKSLP------------MYPAAPLEKMFPRVNP------------ 280
Query: 402 XXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
K DL+ RML +DP RIT AL+H + + D
Sbjct: 281 ----------KGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHF 261
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 100 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 157 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 262
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + +IE L E V
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKEIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+++ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLMI--DQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 85
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 86 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 142
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 143 YLHS--LDLIYRDLKPENLLI--DEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 198
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 248
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 114/230 (49%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ +E H A+KI+ +K+ + QIE L E V
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + + +L+ F ++L +V E ++ LR R ++ Q+
Sbjct: 100 NFPF-LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFE 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+++ ++ IK+ DFG + ++ R + + Y +PE++L
Sbjct: 157 YLHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 262
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR + R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFAEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ +M G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 156/379 (41%), Gaps = 86/379 (22%)
Query: 81 AQQSQGEDSSHKKEKKLYNE--GYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKA 138
A+ + D+ K + LY + G +D+ D+ ++F +Y+ +IG+G V +
Sbjct: 56 AEAKKLNDAQPKGTENLYFQSMGPEDELPDWAA--AKEFYQKYDPKDVIGRGVSSVVRRC 113
Query: 139 FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA-----DVNNTYYIVRLKRHFMWR 193
A+KI++ L+ Q+E ++ E + V +I+ L +
Sbjct: 114 VHRATGHEFAVKIMEVTAERLSPEQLE-EVREATRRETHILRQVAGHPHIITLIDSYESS 172
Query: 194 NHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKP 252
+ + LVF+L+ L+D L T +S TR + L A+ FL NI+H DLKP
Sbjct: 173 SFMFLVFDLMRKGELFDYL--TEKVALSEKETRSIMRSLLEAVSFLHAN--NIVHRDLKP 228
Query: 253 ENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPEVL------LGIPYDLAI 304
ENILL + + I++ DFG SC L G+++ + + Y +PE+L Y +
Sbjct: 229 ENILLDDNMQ--IRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEV 286
Query: 305 DMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGS 364
D+W+ G IL + G P F ++ + I+E G
Sbjct: 287 DLWACGVILFTLLAGSPPFWHRRQILMLRMIME-------------------------GQ 321
Query: 365 YILKKPK-DGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDY 423
Y P+ D R V KDLI R+L
Sbjct: 322 YQFSSPEWDDRSSTV-----------------------------------KDLISRLLQV 346
Query: 424 DPKTRITPYYALQHNFFKR 442
DP+ R+T ALQH FF+R
Sbjct: 347 DPEARLTAEQALQHPFFER 365
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 115/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD++E +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 91
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E + ++ LR R ++ Q+
Sbjct: 92 NFPF-LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFE 148
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 149 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 204
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 254
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 119
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR R ++ Q+
Sbjct: 120 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFE 176
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 177 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 232
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 282
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+++ ++ I++ DFG + ++ R + + Y +PE+++
Sbjct: 156 YLHS--LDLIYRDLKPENLII--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIII 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 93
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR R ++ Q+
Sbjct: 94 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFE 150
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 151 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 206
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 256
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 119/240 (49%), Gaps = 28/240 (11%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV--NNTYYI 183
+IGKGSFG+V+ A E+ A+K+++ KK L + + + IM++ +V N +
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQ-KKAILKKKEEK----HIMSERNVLLKNVKHP 99
Query: 184 VRLKRHFMWRNHLCLVFELLSYN----LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLS 239
+ HF ++ L F L N Y L R F R ++ ++ +AL +L
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR---ARFYAAEIASALGYLH 156
Query: 240 TPELNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRSPEVLL 296
+ LNI++ DLKPENILL + + I + DFG + + + + Y +PEVL
Sbjct: 157 S--LNIVYRDLKPENILLDS--QGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV-EVLGLPP------KHLLDG 349
PYD +D W LG +L EM G P F N + + I+ + L L P +HLL+G
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEG 272
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +P ++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 119
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 120 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 176
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ + + Y +PE++L
Sbjct: 177 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIIL 232
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 282
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 24/245 (9%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVK-LLEIMNKADVNNTYYIV 184
++G G FGQV K + +A KIIK + + + EVK + +MN+ D N ++
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQLDHAN---LI 149
Query: 185 RLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
+L F +N + LV E + L+D + + ++ L+ T F +Q+C + + ++
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELD-TILFMKQICEGIRHMH--QM 206
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----YRSPEVLLGIP 299
I+H DLKPENIL N IKI+DFG + + R + ++ F + +PEV +
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR--EKLKVNFGTPEFLAPEV---VN 261
Query: 300 YDLA---IDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV-LGLPPKHLLDGAHKTRK 355
YD DMWS+G I + +G F G N+ + +N I+ L + D + + ++
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKE 321
Query: 356 YFDKM 360
+ K+
Sbjct: 322 FISKL 326
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 146/343 (42%), Gaps = 59/343 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKN-----------KKPFLNQAQI-EVKL 168
Y + I GS+G V D E VAIK + N FL + + E++L
Sbjct: 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 169 LEIMNKADVNNTYYI-VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKF 227
L + ++ I V + M + L LV EL+ +L ++ + +S + F
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHK--LYLVTELMRTDLAQVIHDQRIV-ISPQHIQYF 139
Query: 228 SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--LGQRIYQYIQ 285
+ L L E ++H DL P NILL + + I I DF + + Y+
Sbjct: 140 MYHILLGLHVLH--EAGVVHRDLHPGNILLAD--NNDITICDFNLAREDTADANKTHYVT 195
Query: 286 SRFYRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPK 344
R+YR+PE+++ + +DMWS GC++ EM + LF GS +Q+NKIVEV+G P
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 345 H--LLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXX 402
++ + R Y + + P VP
Sbjct: 256 EDVVMFSSPSARDYLR-----NSLSNVPARAWTAVVP----------------------- 287
Query: 403 XXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
+D + DLI +ML+++P+ RI+ AL+H +F+ D
Sbjct: 288 ----TADPVAL-DLIAKMLEFNPQRRISTEQALRHPYFESLFD 325
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
LD+++ +G GSFG+V+ E H A+KI+ +K+ + QIE L E V
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N + +V+L+ F ++L +V E ++ ++ LR S R ++ Q+
Sbjct: 99 NFPF-LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFE 155
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + L++I+ DLKPEN+L+ ++ I++ DFG + ++ R + + +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIIL 211
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
Y+ A+D W+LG ++ EM G P F + KIV P H
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 146/343 (42%), Gaps = 59/343 (17%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKN-----------KKPFLNQAQI-EVKL 168
Y + I GS+G V D E VAIK + N FL + + E++L
Sbjct: 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 169 LEIMNKADVNNTYYI-VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKF 227
L + ++ I V + M + L LV EL+ +L ++ + +S + F
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHK--LYLVTELMRTDLAQVIHDQRIV-ISPQHIQYF 139
Query: 228 SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--LGQRIYQYIQ 285
+ L L E ++H DL P NILL + + I I DF + + Y+
Sbjct: 140 MYHILLGLHVLH--EAGVVHRDLHPGNILLAD--NNDITICDFNLAREDTADANKTHYVT 195
Query: 286 SRFYRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPK 344
R+YR+PE+++ + +DMWS GC++ EM + LF GS +Q+NKIVEV+G P
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 345 H--LLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXX 402
++ + R Y + + P VP
Sbjct: 256 EDVVMFSSPSARDYLR-----NSLSNVPARAWTAVVP----------------------- 287
Query: 403 XXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTAD 445
+D + DLI +ML+++P+ RI+ AL+H +F+ D
Sbjct: 288 ----TADPVAL-DLIAKMLEFNPQRRISTEQALRHPYFESLFD 325
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 113 HGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKP-FLNQAQIEVKLLEI 171
HG RY +G G G V A D + VAIK I P + A E+K++
Sbjct: 5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRR 64
Query: 172 MNKADVNNTYYIV-----RLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRK 226
++ ++ + I+ +L L V+ + Y DL + R
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL 124
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG------QRI 280
F QL L ++ + N++H DLKP N L N + +KI DFG + + +
Sbjct: 125 FMYQLLRGLKYIHSA--NVLHRDLKPAN-LFINTEDLVLKIGDFGLARIMDPHYSHKGHL 181
Query: 281 YQYIQSRFYRSPEVLLGIP--YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVE 337
+ + +++YRSP +LL P Y AIDMW+ GCI EM TG+ LF+G++E++QM I+E
Sbjct: 182 SEGLVTKWYRSPRLLLS-PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE 239
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 39/243 (16%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+L+ + R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVLIDHEHR 169
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + GQ + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + L D K D P + IL GR +
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRK 279
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQH 437
R +H H VS + L F D ++L YD ++R+T A++H
Sbjct: 280 RWERFVH---------------SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEH 321
Query: 438 NFF 440
+F
Sbjct: 322 PYF 324
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 114/228 (50%), Gaps = 10/228 (4%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
L ++I +G GSFG+V + A+K++K K+ + Q+E E + + V
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK-KEIVVRLKQVEHTNDERLMLSIV 63
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+ + I+R+ F + ++ + + L+ LLR + + + + ++ ++C AL
Sbjct: 64 THPF-IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALE 120
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLL 296
+L + + II+ DLKPENILL K IKI DFG + + Y + Y +PEV+
Sbjct: 121 YLHSKD--IIYRDLKPENILL--DKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVS 176
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV-LGLPP 343
PY+ +ID WS G ++ EM G F SN + KI+ L PP
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 224
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 39/243 (16%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 112 VFEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + GQ + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + L D K D P + IL GR +
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRK 279
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQH 437
R +H H VS + L F D ++L YD ++R+T A++H
Sbjct: 280 RWERFVH---------------SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEH 321
Query: 438 NFF 440
+F
Sbjct: 322 PYF 324
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 114/224 (50%), Gaps = 31/224 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK----------PFLNQAQIEVKL 168
D Y + +G G+ G+V AF+ + VAIKII +K P LN + E+++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 68
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYD-LLRNTNFRGVSLNLTRK 226
L+ +N I+++K F ++ +V EL+ L+D ++ N + + L
Sbjct: 69 LKKLNHP------CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL--- 118
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQR--IYQY 283
+ Q+ A+ +L E IIH DLKPEN+LL + + IKI DFG S LG+ +
Sbjct: 119 YFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 284 IQSRFYRSPEVLLGI---PYDLAIDMWSLGCILVEMHTGEPLFS 324
+ Y +PEVL+ + Y+ A+D WSLG IL +G P FS
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 121/246 (49%), Gaps = 20/246 (8%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
+EI +G G+FG+V KA + E A K+I+ K ++ ++E ++EI A ++
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHP 76
Query: 181 YYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLST 240
Y IV+L + L ++ E D + RG++ + +Q+ AL FL +
Sbjct: 77 Y-IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 241 PELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ---LGQRIYQYIQSRFYRSPEVLL- 296
IIH DLK N+L+ I++ DFG S + Q+ +I + ++ +PEV++
Sbjct: 136 K--RIIHRDLKAGNVLMT--LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 297 ----GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHK 352
PYD D+WSLG L+EM EP +E++ M ++++ P LL +
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEP---PHHELNPMRVLLKIAKSDPPTLLTPSKW 248
Query: 353 TRKYFD 358
+ ++ D
Sbjct: 249 SVEFRD 254
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 39/243 (16%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 111 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 168
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + GQ + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 169 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 227
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + L D K D P + IL GR +
Sbjct: 228 KEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRK 278
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQH 437
R +H H VS + L F D ++L YD ++R+T A++H
Sbjct: 279 RWERFVH---------------SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEH 320
Query: 438 NFF 440
+F
Sbjct: 321 PYF 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 39/243 (16%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + GQ + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + L D K D P + IL GR +
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRK 279
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQH 437
R +H H VS + L F D ++L YD ++R+T A++H
Sbjct: 280 RWERFVH---------------SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEH 321
Query: 438 NFF 440
+F
Sbjct: 322 PYF 324
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 114/224 (50%), Gaps = 31/224 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK----------PFLNQAQIEVKL 168
D Y + +G G+ G+V AF+ + VAIKII +K P LN + E+++
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 67
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYD-LLRNTNFRGVSLNLTRK 226
L+ +N I+++K F ++ +V EL+ L+D ++ N + + L
Sbjct: 68 LKKLNHP------CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL--- 117
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQR--IYQY 283
+ Q+ A+ +L E IIH DLKPEN+LL + + IKI DFG S LG+ +
Sbjct: 118 YFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 175
Query: 284 IQSRFYRSPEVLLGI---PYDLAIDMWSLGCILVEMHTGEPLFS 324
+ Y +PEVL+ + Y+ A+D WSLG IL +G P FS
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 114/224 (50%), Gaps = 31/224 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK----------PFLNQAQIEVKL 168
D Y + +G G+ G+V AF+ + VAIKII +K P LN + E+++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 68
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYD-LLRNTNFRGVSLNLTRK 226
L+ +N I+++K F ++ +V EL+ L+D ++ N + + L
Sbjct: 69 LKKLNHP------CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL--- 118
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQR--IYQY 283
+ Q+ A+ +L E IIH DLKPEN+LL + + IKI DFG S LG+ +
Sbjct: 119 YFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 284 IQSRFYRSPEVLLGI---PYDLAIDMWSLGCILVEMHTGEPLFS 324
+ Y +PEVL+ + Y+ A+D WSLG IL +G P FS
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 39/243 (16%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + GQ + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + L D K D P + IL GR +
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRK 279
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQH 437
R +H H VS + L F D ++L YD ++R+T A++H
Sbjct: 280 RWERFVH---------------SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEH 321
Query: 438 NFF 440
+F
Sbjct: 322 PYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 39/243 (16%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + GQ + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + L D K D P + IL GR +
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRK 279
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQH 437
R +H H VS + L F D ++L YD ++R+T A++H
Sbjct: 280 RWERFVH---------------SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEH 321
Query: 438 NFF 440
+F
Sbjct: 322 PYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 39/243 (16%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + GQ + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + L D K D P + IL GR +
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRK 279
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQH 437
R +H H VS + L F D ++L YD ++R+T A++H
Sbjct: 280 RWERFVH---------------SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEH 321
Query: 438 NFF 440
+F
Sbjct: 322 PYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 39/243 (16%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 110 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 167
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + GQ + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 168 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 226
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + L D K D P + IL GR +
Sbjct: 227 KEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRK 277
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQH 437
R +H H VS + L F D ++L YD ++R+T A++H
Sbjct: 278 RWERFVH---------------SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEH 319
Query: 438 NFF 440
+F
Sbjct: 320 PYF 322
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 39/243 (16%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + GQ + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + L D K D P + IL GR +
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRK 279
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQH 437
R +H H VS + L F D ++L YD ++R+T A++H
Sbjct: 280 RWERFVH---------------SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEH 321
Query: 438 NFF 440
+F
Sbjct: 322 PYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 39/243 (16%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + GQ + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + L D K D P + IL GR +
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRK 279
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQH 437
R +H H VS + L F D ++L YD ++R+T A++H
Sbjct: 280 RWERFVH---------------SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEH 321
Query: 438 NFF 440
+F
Sbjct: 322 PYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 39/243 (16%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 111 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 168
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + GQ + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 169 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 227
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + L D K D P + IL GR +
Sbjct: 228 KEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRK 278
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQH 437
R +H H VS + L F D ++L YD ++R+T A++H
Sbjct: 279 RWERFVH---------------SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEH 320
Query: 438 NFF 440
+F
Sbjct: 321 PYF 323
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 114/224 (50%), Gaps = 31/224 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK----------PFLNQAQIEVKL 168
D Y + +G G+ G+V AF+ + VAIKII +K P LN + E+++
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 74
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYD-LLRNTNFRGVSLNLTRK 226
L+ +N I+++K F ++ +V EL+ L+D ++ N + + L
Sbjct: 75 LKKLNHP------CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL--- 124
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQR--IYQY 283
+ Q+ A+ +L E IIH DLKPEN+LL + + IKI DFG S LG+ +
Sbjct: 125 YFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 182
Query: 284 IQSRFYRSPEVLLGI---PYDLAIDMWSLGCILVEMHTGEPLFS 324
+ Y +PEVL+ + Y+ A+D WSLG IL +G P FS
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 226
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 111/228 (48%), Gaps = 12/228 (5%)
Query: 111 IQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLE 170
I+H + LD Y+I +G G+FG V + + + A K + P + + K ++
Sbjct: 44 IKH-DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT--PHESDKETVRKEIQ 100
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQ 229
M+ V +V L F N + +++E +S L++ + + + + +S + ++ +
Sbjct: 101 TMS---VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMR 156
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG--QRIYQYIQSR 287
Q+C L + E N +H DLKPENI+ + + +K++DFG + L Q + +
Sbjct: 157 QVCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTA 214
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
+ +PEV G P DMWS+G + + +G F G N+ + + +
Sbjct: 215 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 262
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 39/243 (16%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + GQ + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + L D K D P + IL GR +
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRK 279
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQH 437
R +H H VS + L F D ++L YD ++R+T A++H
Sbjct: 280 RWERFVH---------------SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEH 321
Query: 438 NFF 440
+F
Sbjct: 322 PYF 324
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 121/246 (49%), Gaps = 20/246 (8%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
+EI +G G+FG+V KA + E A K+I+ K ++ ++E ++EI A ++
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHP 68
Query: 181 YYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLST 240
Y IV+L + L ++ E D + RG++ + +Q+ AL FL +
Sbjct: 69 Y-IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 241 PELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ---LGQRIYQYIQSRFYRSPEVLL- 296
IIH DLK N+L+ I++ DFG S + Q+ +I + ++ +PEV++
Sbjct: 128 K--RIIHRDLKAGNVLMT--LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 297 ----GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHK 352
PYD D+WSLG L+EM EP +E++ M ++++ P LL +
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEMAQIEP---PHHELNPMRVLLKIAKSDPPTLLTPSKW 240
Query: 353 TRKYFD 358
+ ++ D
Sbjct: 241 SVEFRD 246
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 114/224 (50%), Gaps = 31/224 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK----------PFLNQAQIEVKL 168
D Y + +G G+ G+V AF+ + VAIKII +K P LN + E+++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 68
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYD-LLRNTNFRGVSLNLTRK 226
L+ +N I+++K F ++ +V EL+ L+D ++ N + + L
Sbjct: 69 LKKLNHP------CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL--- 118
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQR--IYQY 283
+ Q+ A+ +L E IIH DLKPEN+LL + + IKI DFG S LG+ +
Sbjct: 119 YFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 284 IQSRFYRSPEVLLGI---PYDLAIDMWSLGCILVEMHTGEPLFS 324
+ Y +PEVL+ + Y+ A+D WSLG IL +G P FS
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 39/243 (16%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + GQ + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + L D K D P + IL GR +
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRK 279
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQH 437
R +H H VS + L F D ++L YD ++R+T A++H
Sbjct: 280 RWERFVH---------------SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEH 321
Query: 438 NFF 440
+F
Sbjct: 322 PYF 324
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 87
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 88 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 143 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 199 QYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL 249
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 88
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 89 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 143
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 144 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANSFVGTA 199
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 250
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 39/243 (16%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 117 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 174
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + GQ + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 175 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 233
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + L D K D P + IL GR +
Sbjct: 234 KEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIELD--PRFNDIL-----GRHSRK 284
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVS-DYLKFKDLIFRMLDYDPKTRITPYYALQH 437
R +H H VS + L F D ++L YD ++R+T A++H
Sbjct: 285 RWERFVH---------------SENQHLVSPEALDFLD---KLLRYDHQSRLTAREAMEH 326
Query: 438 NFF 440
+F
Sbjct: 327 PYF 329
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 111/228 (48%), Gaps = 12/228 (5%)
Query: 111 IQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLE 170
I+H + LD Y+I +G G+FG V + + + A K + P + + K ++
Sbjct: 150 IKH-DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT--PHESDKETVRKEIQ 206
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQ 229
M+ V +V L F N + +++E +S L++ + + + + +S + ++ +
Sbjct: 207 TMS---VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMR 262
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG--QRIYQYIQSR 287
Q+C L + E N +H DLKPENI+ + + +K++DFG + L Q + +
Sbjct: 263 QVCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTA 320
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
+ +PEV G P DMWS+G + + +G F G N+ + + +
Sbjct: 321 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 368
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 85
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 86 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 141 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANAFVGTA 196
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 88
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 89 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 143
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 144 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 199
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 250
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 85
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 86 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 141 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 85
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 86 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 141 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 90
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 91 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 145
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 146 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 201
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 202 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 252
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 87
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 88 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 143 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 87
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 88 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 143 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 87
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 88 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 143 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK--------NKKPFLNQAQIEVKLLE 170
DRY+ +G G++G+V+ D AIKIIK N L+ EV +L+
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD----EVAVLK 76
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYD-LLRNTNFRGVSLNLTRKFS 228
++ ++ Y KR++ LV E+ L+D ++ F V + K
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYY------LVMEVYRGGELFDEIILRQKFSEVDAAVIMK-- 128
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSC--QLGQRIYQYIQ 285
Q+ + +L NI+H DLKPEN+LL + R A IKIVDFG S ++G ++ + +
Sbjct: 129 -QVLSGTTYLHKH--NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLG 185
Query: 286 SRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
+ +Y +PEVL YD D+WS G IL + G P F G + + + ++
Sbjct: 186 TAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 64
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 65 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 119
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 120 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 175
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 226
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 65
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 66 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 120
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 121 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 176
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK--------NKKPFLNQAQIEVKLLE 170
DRY+ +G G++G+V+ D AIKIIK N L+ EV +L+
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD----EVAVLK 59
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYD-LLRNTNFRGVSLNLTRKFS 228
++ ++ Y KR++ LV E+ L+D ++ F V + K
Sbjct: 60 QLDHPNIMKLYEFFEDKRNYY------LVMEVYRGGELFDEIILRQKFSEVDAAVIMK-- 111
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSC--QLGQRIYQYIQ 285
Q+ + +L NI+H DLKPEN+LL + R A IKIVDFG S ++G ++ + +
Sbjct: 112 -QVLSGTTYLHKH--NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLG 168
Query: 286 SRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
+ +Y +PEVL YD D+WS G IL + G P F G + + + ++
Sbjct: 169 TAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 62
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 63 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 117
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 118 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 173
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 174 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 224
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 155/390 (39%), Gaps = 108/390 (27%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIK-IIKNKKPFLNQAQI--EVKLLEIMNKA 175
DRYEI LIG GS+G V +A+D E+ VAIK I++ + ++ +I E+ +L +N
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 176 DVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTAL 235
V IV + + + L +V E+ + L R + LT + L L
Sbjct: 113 HVVKVLDIV-IPKDVEKFDELYVVLEIADSDFKKLFRTPVY------LTELHIKTLLYNL 165
Query: 236 LFLS--TPELNIIHCDLKPENILL--------CN--------------------PKRSAI 265
L I+H DLKP N L+ C+ P+ +
Sbjct: 166 LVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDM 225
Query: 266 KIVDFGSSCQLGQRIYQYIQSRFYRSPE-VLLGIPYDLAIDMWSLGCILVEM-------- 316
+V F + L +++ ++ +R+YR+PE +LL Y AID+WS+GCI E+
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285
Query: 317 --HTGE-PLFSGSN--------------------EVDQMNKIVEVLGLPPKHLLDGAHK- 352
H PLF GS+ DQ+N I +LG P + ++ K
Sbjct: 286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKE 345
Query: 353 -TRKYFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYL 411
++Y P K+ + P S +D +
Sbjct: 346 DAKRYIRIFP------KREGTDLAERFPASS-------------------------ADAI 374
Query: 412 KFKDLIFRMLDYDPKTRITPYYALQHNFFK 441
L+ RML ++P RIT L H FFK
Sbjct: 375 H---LLKRMLVFNPNKRITINECLAHPFFK 401
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 63
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 64 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 118
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 119 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 174
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 225
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 87
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L LL+ G TR ++ ++
Sbjct: 88 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIV 142
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 143 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANSFVGTA 198
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 199 QYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 92
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 93 RLD--HPFFV---KLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 147
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 148 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 203
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 204 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 254
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 69
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 70 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 124
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 125 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 180
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 181 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 231
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 84
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 85 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 139
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 140 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANSFVGTA 195
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 246
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 84
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 85 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 139
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 140 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 195
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 246
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 114/224 (50%), Gaps = 31/224 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK----------PFLNQAQIEVKL 168
D Y + +G G+ G+V AF+ + VAI+II +K P LN + E+++
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALN-VETEIEI 193
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYD-LLRNTNFRGVSLNLTRK 226
L+ +N I+++K F ++ +V EL+ L+D ++ N + + L
Sbjct: 194 LKKLNHP------CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL--- 243
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQR--IYQY 283
+ Q+ A+ +L E IIH DLKPEN+LL + + IKI DFG S LG+ +
Sbjct: 244 YFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 301
Query: 284 IQSRFYRSPEVLLGI---PYDLAIDMWSLGCILVEMHTGEPLFS 324
+ Y +PEVL+ + Y+ A+D WSLG IL +G P FS
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 345
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF VV A +L AIKI++ NK P++ + + ++M+
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 87
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 88 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 143 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL 249
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 111/218 (50%), Gaps = 16/218 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
++ +E L+GKG+FG+V+ + + A+KI+K K+ + + ++ L E N+
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 65
Query: 178 NNTY-YIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
N+ + ++ LK F + LC V E + + L R F S + R + ++ +A
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 122
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRS 291
L +L + E N+++ DLK EN++L K IKI DFG + G + + + Y +
Sbjct: 123 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 179
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGE-PLFSGSNE 328
PEVL Y A+D W LG ++ EM G P ++ +E
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 217
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D +EI +G G+FG+V KA + E A K+I K ++ ++E ++EI A +
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK----SEEELEDYMVEIDILASCD 92
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFL 238
+ IV+L F + N+L ++ E + D + R ++ + + +Q AL +L
Sbjct: 93 HPN-IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 239 STPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ---LGQRIYQYIQSRFYRSPEVL 295
+ IIH DLK NIL IK+ DFG S + QR +I + ++ +PEV+
Sbjct: 152 H--DNKIIHRDLKAGNILFT--LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVV 207
Query: 296 L-----GIPYDLAIDMWSLGCILVEMHTGEP 321
+ PYD D+WSLG L+EM EP
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 111/218 (50%), Gaps = 16/218 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
++ +E L+GKG+FG+V+ + + A+KI+K K+ + + ++ L E N+
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 64
Query: 178 NNTY-YIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
N+ + ++ LK F + LC V E + + L R F S + R + ++ +A
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 121
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRS 291
L +L + E N+++ DLK EN++L K IKI DFG + G + + + Y +
Sbjct: 122 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 178
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGE-PLFSGSNE 328
PEVL Y A+D W LG ++ EM G P ++ +E
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 133/319 (41%), Gaps = 79/319 (24%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D YEI LIG+GS+G V A+D +VAIK + L + ++ + I+N+ +
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 179 NTYYIVRLK-----RHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
YI+RL + + L +V E+ +L L + F LT + + +
Sbjct: 88 ---YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF------LTEQHVKTILY 138
Query: 234 ALLFLS--TPELNIIHCDLKPENILLCNPKRSAIKIVDFG-------------------- 271
LL E IIH DLKP N LL + ++KI DFG
Sbjct: 139 NLLLGEKFIHESGIIHRDLKPANCLL--NQDCSVKICDFGLARTINSDKDIHIVNDLEEK 196
Query: 272 --------SSCQLGQRIYQYIQSRFYRSPE-VLLGIPYDLAIDMWSLGCILVEM------ 316
+ L +++ ++ +R+YR+PE +LL Y +ID+WS GCI E+
Sbjct: 197 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
Query: 317 HTGE-----PLFSGS-----------------NEVDQMNKIVEVLGLPPKHLLDGAHKTR 354
H PLF GS + DQ+N I V+G PP+ L K
Sbjct: 257 HINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQE 316
Query: 355 --KYFDKMP--DGSYILKK 369
KY P DG + KK
Sbjct: 317 VIKYIKLFPTRDGIDLSKK 335
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D +EI +G G+FG+V KA + E A K+I K ++ ++E ++EI A +
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK----SEEELEDYMVEIDILASCD 92
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFL 238
+ IV+L F + N+L ++ E + D + R ++ + + +Q AL +L
Sbjct: 93 HPN-IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 239 STPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ---LGQRIYQYIQSRFYRSPEVL 295
+ IIH DLK NIL IK+ DFG S + QR +I + ++ +PEV+
Sbjct: 152 H--DNKIIHRDLKAGNILFT--LDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVV 207
Query: 296 L-----GIPYDLAIDMWSLGCILVEMHTGEP 321
+ PYD D+WSLG L+EM EP
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 158/356 (44%), Gaps = 64/356 (17%)
Query: 115 EKFLDRYEIDSL-IGKGSFGQVVKAFDLEEQCHV--AIKIIKNKKPFLNQAQIEVKLLEI 171
E+ D +E + +G+G++G V KA + + A+K I+ ++ + E+ LL
Sbjct: 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACR-EIALLRE 74
Query: 172 MNKADVNNTYYIVRLKRHFMWR--NHLCLVFELLSYNLYDLLR-----NTNFRGVSL--N 222
+ +V + L++ F+ + L+F+ ++L+ +++ N + V L
Sbjct: 75 LKHPNV------ISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 223 LTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCN--PKRSAIKIVDFG------SSC 274
+ + Q+ + +L ++H DLKP NIL+ P+R +KI D G S
Sbjct: 129 MVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL 186
Query: 275 QLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNE----- 328
+ + + + +YR+PE+LLG Y AID+W++GCI E+ T EP+F E
Sbjct: 187 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS 246
Query: 329 ----VDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKVPGSRRL 384
DQ+++I V+G P A K + KMP+ S ++K D R+ +
Sbjct: 247 NPYHHDQLDRIFNVMGFP-------ADKDWEDIKKMPEHSTLMK---DFRRNTYTNCSLI 296
Query: 385 HDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHNFF 440
H V K L+ ++L DP RIT A+Q +F
Sbjct: 297 ---------------KYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 337
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 120/245 (48%), Gaps = 22/245 (8%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
++ +E L+GKG+FG+V+ + + A+KI+K K+ + + ++ L E N+
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 203
Query: 178 NNTY-YIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
N+ + ++ LK F + LC V E + + L R F S + R + ++ +A
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 260
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRS 291
L +L + E N+++ DLK EN++L K IKI DFG + G + + + Y +
Sbjct: 261 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 317
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGE-PLFSGSNE------VDQMNKIVEVLGLPPK 344
PEVL Y A+D W LG ++ EM G P ++ +E + + + LG K
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 377
Query: 345 HLLDG 349
LL G
Sbjct: 378 SLLSG 382
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 15/231 (6%)
Query: 121 YEIDSLIGKGSFG---QVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
+E+ ++GKG +G QV K A+K++K K + A+ N +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK-KAMIVRNAKDTAHTKAERNILEE 77
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-QQLCTALL 236
+IV L F L L+ E LS +L G+ + T F ++ AL
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGG--ELFMQLEREGIFMEDTACFYLAEISMALG 135
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRSPE 293
L + II+ DLKPENI+L + + +K+ DFG S G + + + Y +PE
Sbjct: 136 HLH--QKGIIYRDLKPENIMLNH--QGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE 191
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV-LGLPP 343
+L+ ++ A+D WSLG ++ +M TG P F+G N ++KI++ L LPP
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 120/245 (48%), Gaps = 22/245 (8%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
++ +E L+GKG+FG+V+ + + A+KI+K K+ + + ++ L E N+
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 206
Query: 178 NNTY-YIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
N+ + ++ LK F + LC V E + + L R F S + R + ++ +A
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 263
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRS 291
L +L + E N+++ DLK EN++L K IKI DFG + G + + + Y +
Sbjct: 264 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 320
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGE-PLFSGSNE------VDQMNKIVEVLGLPPK 344
PEVL Y A+D W LG ++ EM G P ++ +E + + + LG K
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 380
Query: 345 HLLDG 349
LL G
Sbjct: 381 SLLSG 385
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 114/224 (50%), Gaps = 31/224 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK----------PFLNQAQIEVKL 168
D Y + +G G+ G+V AF+ + VAI+II +K P LN + E+++
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALN-VETEIEI 207
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYD-LLRNTNFRGVSLNLTRK 226
L+ +N I+++K F ++ +V EL+ L+D ++ N + + L
Sbjct: 208 LKKLNHP------CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL--- 257
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQR--IYQY 283
+ Q+ A+ +L E IIH DLKPEN+LL + + IKI DFG S LG+ +
Sbjct: 258 YFYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 315
Query: 284 IQSRFYRSPEVLLGI---PYDLAIDMWSLGCILVEMHTGEPLFS 324
+ Y +PEVL+ + Y+ A+D WSLG IL +G P FS
Sbjct: 316 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 359
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 15/231 (6%)
Query: 121 YEIDSLIGKGSFG---QVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
+E+ ++GKG +G QV K A+K++K K + A+ N +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK-KAMIVRNAKDTAHTKAERNILEE 77
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-QQLCTALL 236
+IV L F L L+ E LS +L G+ + T F ++ AL
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGG--ELFMQLEREGIFMEDTACFYLAEISMALG 135
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRSPE 293
L + II+ DLKPENI+L + + +K+ DFG S G + + + Y +PE
Sbjct: 136 HLH--QKGIIYRDLKPENIMLNH--QGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPE 191
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV-LGLPP 343
+L+ ++ A+D WSLG ++ +M TG P F+G N ++KI++ L LPP
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 111/218 (50%), Gaps = 16/218 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
++ +E L+GKG+FG+V+ + + A+KI+K K+ + + ++ L E N+
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 63
Query: 178 NNTY-YIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
N+ + ++ LK F + LC V E + + L R F S + R + ++ +A
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 120
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRS 291
L +L + E N+++ DLK EN++L K IKI DFG + G + + + Y +
Sbjct: 121 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 177
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGE-PLFSGSNE 328
PEVL Y A+D W LG ++ EM G P ++ +E
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 215
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D +EI +G G+FG+V KA + E A K+I K ++ ++E ++EI A +
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK----SEEELEDYMVEIDILASCD 92
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFL 238
+ IV+L F + N+L ++ E + D + R ++ + + +Q AL +L
Sbjct: 93 HPN-IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 239 STPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ---LGQRIYQYIQSRFYRSPEVL 295
+ IIH DLK NIL IK+ DFG S + QR +I + ++ +PEV+
Sbjct: 152 H--DNKIIHRDLKAGNILFT--LDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVV 207
Query: 296 L-----GIPYDLAIDMWSLGCILVEMHTGEP 321
+ PYD D+WSLG L+EM EP
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 28/231 (12%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLLEIMN 173
++ ++G+GSF V A +L AIKI++ NK P++ + + ++M+
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRER------DVMS 85
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKFSQQLC 232
+ D + +++ K +F +++ L F L +LL+ G TR ++ ++
Sbjct: 86 RLD--HPFFV---KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-----QRIYQYIQSR 287
+AL +L IIH DLKPENILL I+I DFG++ L R ++ +
Sbjct: 141 SALEYLHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y SPE+L + D+W+LGCI+ ++ G P F NE KI+++
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKII--KNKKPFLNQAQIEVKLLEIMNKADVNNTYYIV 184
IGKGSFG+V K D Q VAIKII + + + Q E+ +L + + V YY
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTK-YYGS 89
Query: 185 RLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
LK +W ++ E L + DLLR F + K ++ L +L + +
Sbjct: 90 YLKGSKLW-----IIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKGLDYLHSEKK 141
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRFYRSPEVLLGIPY 300
IH D+K N+LL ++ +K+ DFG + QL + ++ + F+ +PEV+ Y
Sbjct: 142 --IHRDIKAANVLLS--EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAY 197
Query: 301 DLAIDMWSLGCILVEMHTGEP 321
D D+WSLG +E+ GEP
Sbjct: 198 DSKADIWSLGITAIELAKGEP 218
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 110/247 (44%), Gaps = 29/247 (11%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKN---KKP-----FLNQAQIEVKLLE 170
DRYE+ ++G G +V A DL + VA+K+++ + P F +AQ
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ------- 64
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-- 228
N A +N+ + L + ++ Y LR+ + R
Sbjct: 65 --NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVI 122
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQ--- 282
C AL F + + IIH D+KP NIL+ +A+K+VDFG + + G + Q
Sbjct: 123 ADACQALNF--SHQNGIIHRDVKPANILIS--ATNAVKVVDFGIARAIADSGNSVXQTAA 178
Query: 283 YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLP 342
I + Y SPE G D D++SLGC+L E+ TGEP F+G + V + V +P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Query: 343 PKHLLDG 349
P +G
Sbjct: 239 PSARHEG 245
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKAD 176
F D YE+ +IGKG+F V + + E A+KI+ K F + + + ++ +A
Sbjct: 22 FEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAK-FTSSPGLSTE--DLKREAS 78
Query: 177 VNNTY---YIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGV-SLNLTRKFSQQ 230
+ + +IV L + L +VFE + +++++ + V S + + +Q
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQR---IYQYIQS 286
+ AL + + NIIH D+KPEN+LL + + SA +K+ DFG + QLG+ + +
Sbjct: 139 ILEALRYCH--DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGT 196
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNE 328
+ +PEV+ PY +D+W G IL + +G F G+ E
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 414 KDLIFRMLDYDPKTRITPYYALQHNFFK 441
KDL+ RML DP RIT Y AL H + K
Sbjct: 264 KDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
+E+ L+G G++GQV K ++ AIK++ + + E+ +L+ + T
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 181 YYIVRLKRHF-MWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFL 238
YY +K++ + L LV E + ++ DL++NT + +++ L L
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 239 STPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRFYRSPEVL 295
+ +IH D+K +N+LL + + +K+VDFG S QL + + + +I + ++ +PEV+
Sbjct: 146 H--QHKVIHRDIKGQNVLLT--ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 201
Query: 296 L-----GIPYDLAIDMWSLGCILVEMHTGEP 321
YD D+WSLG +EM G P
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 12/231 (5%)
Query: 112 QHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
+ E D Y+ ++G G+F +V+ A D Q VAIK I K + +E ++ +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEI-AV 69
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
++K N IV L + HL L+ +L+S L+D + F + + Q
Sbjct: 70 LHKIKHPN---IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQ 124
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCN-PKRSAIKIVDFGSSCQL--GQRIYQYIQSR 287
+ A+ +L +L I+H DLKPEN+L + + S I I DFG S G + +
Sbjct: 125 VLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y +PEVL PY A+D WS+G I + G P F N+ +I++
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA 233
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
++Y I +G+G FG V + + + K +K K +Q ++ K + I+N A
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT--DQVLVK-KEISILNIARHR 61
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTR--KFSQQLCTALL 236
N I+ L F L ++FE +S D+ N LN + Q+C AL
Sbjct: 62 N---ILHLHESFESMEELVMIFEFISG--LDIFERINTSAFELNEREIVSYVHQVCEALQ 116
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPEV 294
FL + NI H D++PENI+ + S IKI++FG + QL G + Y +PEV
Sbjct: 117 FLHSH--NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV 174
Query: 295 LLGIPYDLAIDMWSLGCILVEMHTG-EPLFSGSNE 328
A DMWSLG ++ + +G P + +N+
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 65
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 66 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 119
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF-YRS 291
AL + + +IH D+KPEN+LL + +KI DFG SC + Y
Sbjct: 120 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSCHAPSSRRTTLSGTLDYLP 175
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 234
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 120/240 (50%), Gaps = 30/240 (12%)
Query: 111 IQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLE--EQCHVAIKIIKNKKPFLNQAQIEVKL 168
+Q GE+ D YE+ +G+G + +V + ++ E+C + I KK + L
Sbjct: 25 VQWGEQ--DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKK---KIKREIKIL 79
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLT---- 224
+M ++ IVR + L+FE ++ NT+F+ + LT
Sbjct: 80 QNLMGGPNIVKLLDIVRDQH----SKTPSLIFEYVN--------NTDFKVLYPTLTDYDI 127
Query: 225 RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS--CQLGQRIYQ 282
R + +L AL + + I+H D+KP N+++ + R ++++D+G + G+
Sbjct: 128 RYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELRK-LRLIDWGLAEFYHPGKEYNV 184
Query: 283 YIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HTGEPLFSGSNEVDQMNKIVEVLG 340
+ SR+++ PE+L+ + YD ++DMWSLGC+ M EP F G + DQ+ KI +VLG
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 114/242 (47%), Gaps = 37/242 (15%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + +L AL + + I+H D+KP N+++ + ++
Sbjct: 113 VFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSK--GIMHRDVKPHNVMI-DHQQ 169
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + Q + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 170 KKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 229
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + + + + D P + IL + R
Sbjct: 230 REPFFHGQDNYDQLVRIAKVLGTEELY----GYLKKYHIDLDPHFNDILGQHSRKRWENF 285
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHN 438
S H + DL+ ++L YD + R+T A++H
Sbjct: 286 IHSENRHLVSPEAL----------------------DLLDKLLRYDHQQRLTAKEAMEHP 323
Query: 439 FF 440
+F
Sbjct: 324 YF 325
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 110/247 (44%), Gaps = 29/247 (11%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKN---KKP-----FLNQAQIEVKLLE 170
DRYE+ ++G G +V A DL + VA+K+++ + P F +AQ
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ------- 64
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-- 228
N A +N+ + L + ++ Y LR+ + R
Sbjct: 65 --NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVI 122
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQ--- 282
C AL F + + IIH D+KP NI++ +A+K++DFG + + G + Q
Sbjct: 123 ADACQALNF--SHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 283 YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLP 342
I + Y SPE G D D++SLGC+L E+ TGEP F+G + V + V +P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Query: 343 PKHLLDG 349
P +G
Sbjct: 239 PSARHEG 245
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 114/242 (47%), Gaps = 37/242 (15%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + +L AL + + I+H D+KP N+++ + ++
Sbjct: 118 VFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSK--GIMHRDVKPHNVMI-DHQQ 174
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + Q + SR+++ PE+L+ YD ++DMWSLGC+L M
Sbjct: 175 KKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 234
Query: 319 GEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDGSYILKKPKDGRKPKV 378
EP F G + DQ+ +I +VLG + + + + D P + IL + R
Sbjct: 235 REPFFHGQDNYDQLVRIAKVLGTEELY----GYLKKYHIDLDPHFNDILGQHSRKRWENF 290
Query: 379 PGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKDLIFRMLDYDPKTRITPYYALQHN 438
S H + DL+ ++L YD + R+T A++H
Sbjct: 291 IHSENRHLVSPEAL----------------------DLLDKLLRYDHQQRLTAKEAMEHP 328
Query: 439 FF 440
+F
Sbjct: 329 YF 330
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + +L AL + + I+H D+KP N+++ + R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + G+ + SR+++ PE+L+ + YD ++DMWSLGC+ M
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 319 GEPLFSGSNEVDQMNKIVEVLG 340
EP F G + DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + +L AL + + I+H D+KP N+++ + R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + G+ + SR+++ PE+L+ + YD ++DMWSLGC+ M
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 319 GEPLFSGSNEVDQMNKIVEVLG 340
EP F G + DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + +L AL + + I+H D+KP N+++ + R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + G+ + SR+++ PE+L+ + YD ++DMWSLGC+ M
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 319 GEPLFSGSNEVDQMNKIVEVLG 340
EP F G + DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + +L AL + + I+H D+KP N+++ + R
Sbjct: 107 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 164
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + G+ + SR+++ PE+L+ + YD ++DMWSLGC+ M
Sbjct: 165 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 223
Query: 319 GEPLFSGSNEVDQMNKIVEVLG 340
EP F G + DQ+ KI +VLG
Sbjct: 224 KEPFFYGHDNHDQLVKIAKVLG 245
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + +L AL + + I+H D+KP N+++ + R
Sbjct: 127 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 184
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + G+ + SR+++ PE+L+ + YD ++DMWSLGC+ M
Sbjct: 185 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 243
Query: 319 GEPLFSGSNEVDQMNKIVEVLG 340
EP F G + DQ+ KI +VLG
Sbjct: 244 KEPFFYGHDNHDQLVKIAKVLG 265
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 12/231 (5%)
Query: 112 QHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
+ E D Y+ ++G G+F +V+ A D Q VAIK I + + +E ++ +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI-AV 69
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
++K N IV L + HL L+ +L+S L+D + F + + Q
Sbjct: 70 LHKIKHPN---IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQ 124
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCN-PKRSAIKIVDFGSSCQL--GQRIYQYIQSR 287
+ A+ +L +L I+H DLKPEN+L + + S I I DFG S G + +
Sbjct: 125 VLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y +PEVL PY A+D WS+G I + G P F N+ +I++
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA 233
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 15/233 (6%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +++ IG+GS+G+V A + A K I K F+ + +EIM D N
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIP--KYFVEDVDRFKQEIEIMKSLDHPN- 84
Query: 181 YYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLS 239
I+RL F + LV EL + L++ R + R + + + + +A+ +
Sbjct: 85 --IIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSAVAYCH 140
Query: 240 TPELNIIHCDLKPENIL-LCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPEVLL 296
+LN+ H DLKPEN L L + S +K++DFG + + G+ + + + +Y SP+VL
Sbjct: 141 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 198
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVE-VLGLPPKHLLD 348
G+ Y D WS G ++ + G P FS + + M KI E P K L+
Sbjct: 199 GL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLN 250
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 414 KDLIFRMLDYDPKTRITPYYALQHNFFKR 442
+ LI R+L PK RIT AL+H +F++
Sbjct: 256 ESLIRRLLTKSPKQRITSLQALEHEWFEK 284
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 12/231 (5%)
Query: 112 QHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
+ E D Y+ ++G G+F +V+ A D Q VAIK I + + +E ++ +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI-AV 69
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
++K N IV L + HL L+ +L+S L+D + F + + Q
Sbjct: 70 LHKIKHPN---IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQ 124
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCN-PKRSAIKIVDFGSSCQL--GQRIYQYIQSR 287
+ A+ +L +L I+H DLKPEN+L + + S I I DFG S G + +
Sbjct: 125 VLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y +PEVL PY A+D WS+G I + G P F N+ +I++
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA 233
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 12/231 (5%)
Query: 112 QHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
+ E D Y+ ++G G+F +V+ A D Q VAIK I + + +E ++ +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI-AV 69
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
++K N IV L + HL L+ +L+S L+D + F + + Q
Sbjct: 70 LHKIKHPN---IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQ 124
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCN-PKRSAIKIVDFGSSCQL--GQRIYQYIQSR 287
+ A+ +L +L I+H DLKPEN+L + + S I I DFG S G + +
Sbjct: 125 VLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
Y +PEVL PY A+D WS+G I + G P F N+ +I++
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA 233
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + +L AL + + I+H D+KP N+++ + R
Sbjct: 108 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 165
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + G+ + SR+++ PE+L+ + YD ++DMWSLGC+ M
Sbjct: 166 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 224
Query: 319 GEPLFSGSNEVDQMNKIVEVLG 340
EP F G + DQ+ KI +VLG
Sbjct: 225 KEPFFYGHDNHDQLVKIAKVLG 246
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 15/233 (6%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y +++ IG+GS+G+V A + A K I K F+ + +EIM D N
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIP--KYFVEDVDRFKQEIEIMKSLDHPN- 67
Query: 181 YYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLS 239
I+RL F + LV EL + L++ R + R + + + + +A+ +
Sbjct: 68 --IIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSAVAYCH 123
Query: 240 TPELNIIHCDLKPENIL-LCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPEVLL 296
+LN+ H DLKPEN L L + S +K++DFG + + G+ + + + +Y SP+VL
Sbjct: 124 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 181
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVE-VLGLPPKHLLD 348
G+ Y D WS G ++ + G P FS + + M KI E P K L+
Sbjct: 182 GL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLN 233
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 414 KDLIFRMLDYDPKTRITPYYALQHNFFKR 442
+ LI R+L PK RIT AL+H +F++
Sbjct: 239 ESLIRRLLTKSPKQRITSLQALEHEWFEK 267
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + +L AL + + I+H D+KP N+++ + R
Sbjct: 107 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 164
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + G+ + SR+++ PE+L+ + YD ++DMWSLGC+ M
Sbjct: 165 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 223
Query: 319 GEPLFSGSNEVDQMNKIVEVLG 340
EP F G + DQ+ KI +VLG
Sbjct: 224 KEPFFYGHDNHDQLVKIAKVLG 245
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 156/386 (40%), Gaps = 108/386 (27%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D Y I LIG+GS+G V A+D + +VAIK + L + ++ + I+N+ +
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 179 NTYYIVRL-----KRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
YI+RL + + L +V E+ +L L + F LT + + +
Sbjct: 86 ---YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF------LTEEHIKTILY 136
Query: 234 ALLFLST--PELNIIHCDLKPENILLCNPKRSAIKIVDFG-------------------- 271
LL E IIH DLKP N LL + ++K+ DFG
Sbjct: 137 NLLLGENFIHESGIIHRDLKPANCLLN--QDCSVKVCDFGLARTINSEKDTNIVNDLEEN 194
Query: 272 -----SSCQLGQRIYQYIQSRFYRSPE-VLLGIPYDLAIDMWSLGCILVEM------HTG 319
+ L +++ ++ +R+YR+PE +LL Y +ID+WS GCI E+ H
Sbjct: 195 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254
Query: 320 E-----PLFSGS-----------------NEVDQMNKIVEVLGLPPKHLLDGAHKTR--K 355
+ PLF GS + DQ+N I ++G P + L +K K
Sbjct: 255 DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIK 314
Query: 356 YFDKMPDGSYILKKPKDGRKPKVPGSRRLHDIXXXXXXXXXXXXXXXXXHSVSDYLKFKD 415
Y P +KP + K K P S+SD +
Sbjct: 315 YIKLFPH-----RKPIN-LKQKYP--------------------------SISD--DGIN 340
Query: 416 LIFRMLDYDPKTRITPYYALQHNFFK 441
L+ ML ++P RIT AL H + K
Sbjct: 341 LLESMLKFNPNKRITIDQALDHPYLK 366
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + +L AL + + I+H D+KP N+++ + R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + G+ + SR+++ PE+L+ + YD ++DMWSLGC+ M
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 319 GEPLFSGSNEVDQMNKIVEVLG 340
EP F G + DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Query: 207 LYDLLRNTNFRGVSLNLT----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+++ + NT+F+ + LT R + +L AL + + I+H D+KP N+++ + R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 263 SAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEM-HT 318
++++D+G + G+ + SR+++ PE+L+ + YD ++DMWSLGC+ M
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 319 GEPLFSGSNEVDQMNKIVEVLG 340
EP F G + DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI---EVKLLEIMNKADVNNTYYI 183
+G G++G+V+ D AIKII+ + EV +L++++ ++ Y
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 184 VRLKRHFMWRNHLCLVFELL-SYNLYD-LLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
KR++ LV E L+D ++ F V + K Q+ + + +L
Sbjct: 105 FEDKRNYY------LVMECYKGGELFDEIIHRMKFNEVDAAVIIK---QVLSGVTYLHKH 155
Query: 242 ELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSC--QLGQRIYQYIQSRFYRSPEVLLGI 298
NI+H DLKPEN+LL + ++ A IKIVDFG S + +++ + + + +Y +PEVL
Sbjct: 156 --NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK- 212
Query: 299 PYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
YD D+WS+G IL + G P F G + + + K+
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV 249
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 108 DYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVK 167
++++ KF D Y++ +GKG+F V + A KII KK Q +
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER 77
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRK 226
I K N IVRL + LVF+L++ L++ + F S
Sbjct: 78 EARICRKLQHPN---IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASH 132
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCN-PKRSAIKIVDFGSSCQL--GQRIYQY 283
QQ+ ++ + + I+H +LKPEN+LL + K +A+K+ DFG + ++ + + +
Sbjct: 133 CIQQILESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 190
Query: 284 IQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+ Y SPEVL PY +D+W+ G IL + G P F
Sbjct: 191 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 15/246 (6%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
+D +E ++GKGSFG+V+ A E A+K++K K L +E + E +
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLK-KDVILQDDDVECTMTEKRILSLA 80
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTAL 235
N ++ +L F + L V E ++ ++ + ++ F R ++ ++ +AL
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEAR---ARFYAAEIISAL 137
Query: 236 LFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS----CQLGQRIYQYIQSRFYRS 291
+FL + II+ DLK +N+LL K+ DFG C G + + Y +
Sbjct: 138 MFLH--DKGIIYRDLKLDNVLL--DHEGHCKLADFGMCKEGICN-GVTTATFCGTPDYIA 192
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAH 351
PE+L + Y A+D W++G +L EM G F NE D I+ + P L + A
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDAT 252
Query: 352 KTRKYF 357
K F
Sbjct: 253 GILKSF 258
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 109/247 (44%), Gaps = 29/247 (11%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKN---KKP-----FLNQAQIEVKLLE 170
DRYE+ ++G G +V A DL VA+K+++ + P F +AQ
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ------- 64
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-- 228
N A +N+ + L + ++ Y LR+ + R
Sbjct: 65 --NAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVI 122
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQ--- 282
C AL F + + IIH D+KP NI++ +A+K++DFG + + G + Q
Sbjct: 123 ADACQALNF--SHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 283 YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLP 342
I + Y SPE G D D++SLGC+L E+ TGEP F+G + V + V +P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Query: 343 PKHLLDG 349
P +G
Sbjct: 239 PSARHEG 245
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 29/225 (12%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKN---KKP-----FLNQAQIEVKLLE 170
DRYE+ ++G G +V A DL + VA+K+++ + P F +AQ
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ------- 64
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-- 228
N A +N+ + L + ++ Y LR+ + R
Sbjct: 65 --NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVI 122
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQ--- 282
C AL F + + IIH D+KP NI++ +A+K++DFG + + G + Q
Sbjct: 123 ADACQALNF--SHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 283 YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSN 327
I + Y SPE G D D++SLGC+L E+ TGEP F+G +
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 109/247 (44%), Gaps = 29/247 (11%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKN---KKP-----FLNQAQIEVKLLE 170
DRYE+ ++G G +V A DL VA+K+++ + P F +AQ
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ------- 64
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-- 228
N A +N+ + L + ++ Y LR+ + R
Sbjct: 65 --NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVI 122
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQ--- 282
C AL F + + IIH D+KP NI++ +A+K++DFG + + G + Q
Sbjct: 123 ADACQALNF--SHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 283 YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLP 342
I + Y SPE G D D++SLGC+L E+ TGEP F+G + V + V +P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Query: 343 PKHLLDG 349
P +G
Sbjct: 239 PSARHEG 245
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 65 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 118
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + + Y
Sbjct: 119 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTELCGTLDYLP 174
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 11/222 (4%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
++ +E+ ++GKGSFG+V A + AIK +K K L +E ++E +
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALK-KDVVLMDDDVECTMVEKRVLSLA 75
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNT-NFRGVSLNLTRKFSQQLCTALL 236
++ + F + +L V E L N DL+ + + L+ ++ ++ L
Sbjct: 76 WEHPFLTHMFCTFQTKENLFFVMEYL--NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--LGQ-RIYQYIQSRFYRSPE 293
FL + I++ DLK +NILL K IKI DFG + LG + ++ + Y +PE
Sbjct: 134 FLHSK--GIVYRDLKLDNILL--DKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPE 189
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
+LLG Y+ ++D WS G +L EM G+ F G +E + + I
Sbjct: 190 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 30/229 (13%)
Query: 113 HGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIE 165
HG F + YE ++G+G V + A+KII + + +
Sbjct: 13 HG--FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 166 VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLT 224
+K ++I+ K V+ I++LK + LVF+L+ L+D L + L+
Sbjct: 71 LKEVDILRK--VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE------KVTLS 122
Query: 225 RKFSQQLCTALL--FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRI 280
K ++++ ALL + +LNI+H DLKPENILL + IK+ DFG SCQL G+++
Sbjct: 123 EKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN--IKLTDFGFSCQLDPGEKL 180
Query: 281 YQYIQSRFYRSPEVLLGI------PYDLAIDMWSLGCILVEMHTGEPLF 323
+ + Y +PE++ Y +DMWS G I+ + G P F
Sbjct: 181 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + +A+K++ + L +A +E +L +EI +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 65 LRHPN---ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 118
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 119 NALSYCHSKK--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRAALCGTLDYLP 174
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + D +I V P + +GA
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGA 233
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 90
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 91 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 144
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 145 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLP 200
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 259
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 115/230 (50%), Gaps = 17/230 (7%)
Query: 121 YEIDSLIGKGSFGQV--VKAFDLEEQCHV-AIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
+E+ ++G+GSFG+V V+ + H+ A+K++K K + ++ K+ E ADV
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLK-KATLKVRDRVRTKM-ERDILADV 87
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-QQLCTALL 236
N+ + +V+L F L L+ + L DL + + KF +L L
Sbjct: 88 NHPF-VVKLHYAFQTEGKLYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALGLD 144
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYRSPE 293
L + L II+ DLKPENILL + IK+ DFG S + ++ Y + + Y +PE
Sbjct: 145 HLHS--LGIIYRDLKPENILL--DEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE 200
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV-LGLP 342
V+ + + D WS G ++ EM TG F G + + M I++ LG+P
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 109/247 (44%), Gaps = 29/247 (11%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKN---KKP-----FLNQAQIEVKLLE 170
DRYE+ ++G G +V A DL VA+K+++ + P F +AQ
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ------- 81
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-- 228
N A +N+ + L + ++ Y LR+ + R
Sbjct: 82 --NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVI 139
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQ--- 282
C AL F + + IIH D+KP NI++ +A+K++DFG + + G + Q
Sbjct: 140 ADACQALNF--SHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGNSVTQTAA 195
Query: 283 YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLP 342
I + Y SPE G D D++SLGC+L E+ TGEP F+G + V + V +P
Sbjct: 196 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 255
Query: 343 PKHLLDG 349
P +G
Sbjct: 256 PSARHEG 262
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 14/224 (6%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-----PFLNQAQIEVKLL 169
E F Y + L+GKG FG V L ++ VAIK+I + P + +++
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFE--LLSYNLYDLLRNTNFRGVSLNLTRKF 227
+ ++RL F + LV E L + +L+D + G +R F
Sbjct: 87 LLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGE--GPSRCF 144
Query: 228 SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ-YIQS 286
Q+ A+ + ++H D+K ENIL+ + +R K++DFGS L Y + +
Sbjct: 145 FGQVVAAIQHCHS--RGVVHRDIKDENILI-DLRRGCAKLIDFGSGALLHDEPYTDFDGT 201
Query: 287 RFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
R Y PE + Y L +WSLG +L +M G+ F E+
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI 245
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 81
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 82 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 135
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 136 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLP 191
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 192 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 250
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 119/245 (48%), Gaps = 15/245 (6%)
Query: 98 YNEGYDDDNHDYIIQHGE----KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK 153
Y++ Y+D Y+ Q E D Y+I +G G+FG V + + K I
Sbjct: 26 YDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFIN 85
Query: 154 NKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLR 212
P L++ ++ ++ IMN+ + ++ L F + + L+ E LS L+D +
Sbjct: 86 TPYP-LDKYTVKNEI-SIMNQL---HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIA 140
Query: 213 NTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGS 272
+++ +S + +Q C L + E +I+H D+KPENI+ K S++KI+DFG
Sbjct: 141 AEDYK-MSEAEVINYMRQACEGLKHMH--EHSIVHLDIKPENIMCETKKASSVKIIDFGL 197
Query: 273 SCQLG--QRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVD 330
+ +L + + + + +PE++ P DMW++G + + +G F+G ++++
Sbjct: 198 ATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE 257
Query: 331 QMNKI 335
+ +
Sbjct: 258 TLQNV 262
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 63
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 64 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 117
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 118 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLP 173
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 174 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 232
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 65 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 118
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 119 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLCGTLDYLP 174
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 66
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 67 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 120
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 121 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLCGTLDYLP 176
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 235
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 69
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 70 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 123
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 124 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLP 179
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE + G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 180 PEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 67
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 68 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 121
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 122 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLP 177
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 65 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 118
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 119 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTXLCGTLDYLP 174
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 65 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 118
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 119 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRAALCGTLDYLP 174
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 69
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 70 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 123
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 124 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLCGTLDYLP 179
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 68
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 69 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 122
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 123 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLP 178
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 237
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 13/217 (5%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
++GKGSFG+V+ A + AIKI+K K + +E ++E A ++ ++ +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILK-KDVVIQDDDVECTMVEKRVLALLDKPPFLTQ 84
Query: 186 LKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
L F + L V E ++ +Y + + F+ ++ ++ L FL +
Sbjct: 85 LHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF---YAAEISIGLFFLH--KR 139
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYRSPEVLLGIPY 300
II+ DLK +N++L IKI DFG + G ++ + Y +PE++ PY
Sbjct: 140 GIIYRDLKLDNVML--DSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPY 197
Query: 301 DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVE 337
++D W+ G +L EM G+P F G +E + I+E
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 69
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 70 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 123
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 124 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLP 179
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 65 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 118
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 119 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLP 174
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 19/220 (8%)
Query: 112 QHGEKFLDRYEIDSLIGK-GSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLE 170
+H + L+ + +IG+ G FG+V KA + E A K+I K ++ ++E ++E
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTK----SEEELEDYMVE 57
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
I A ++ IV+L F + N+L ++ E + D + R ++ + + +Q
Sbjct: 58 IDILASCDHPN-IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 116
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ----LGQRIYQYIQS 286
AL +L + IIH DLK NIL IK+ DFG S + QR +I +
Sbjct: 117 TLDALNYLH--DNKIIHRDLKAGNILFT--LDGDIKLADFGVSAKNTRTXIQRRDSFIGT 172
Query: 287 RFYRSPEVLL-----GIPYDLAIDMWSLGCILVEMHTGEP 321
++ +PEV++ PYD D+WSLG L+EM EP
Sbjct: 173 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 212
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 64
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 65 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 118
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 119 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLCGTLDYLP 174
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 68 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 121
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 122 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLCGTLDYLP 177
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 30/229 (13%)
Query: 113 HGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIE 165
HG F + YE ++G+G V + A+KII + + +
Sbjct: 13 HG--FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 166 VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLT 224
+K ++I+ K V+ I++LK + LVF+L+ L+D L + L+
Sbjct: 71 LKEVDILRK--VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE------KVTLS 122
Query: 225 RKFSQQLCTALL--FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRI 280
K ++++ ALL + +LNI+H DLKPENILL + IK+ DFG SCQL G+++
Sbjct: 123 EKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN--IKLTDFGFSCQLDPGEKL 180
Query: 281 YQYIQSRFYRSPEVLLGI------PYDLAIDMWSLGCILVEMHTGEPLF 323
+ Y +PE++ Y +DMWS G I+ + G P F
Sbjct: 181 RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 110/241 (45%), Gaps = 14/241 (5%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII--KNKKPFLNQAQIEVKLLEI 171
GE D +E S +G G+ G V K +A K+I + K NQ ++ L++
Sbjct: 20 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI---IRELQV 76
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQL 231
+++ N+ YIV F + + E + D + R + + K S +
Sbjct: 77 LHEC---NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAV 132
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYIQSRFYR 290
L +L I+H D+KP NIL+ + R IK+ DFG S QL + ++ +R Y
Sbjct: 133 IKGLTYLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYM 189
Query: 291 SPEVLLGIPYDLAIDMWSLGCILVEMHTGE-PLFSGSNEVDQMNKIVEVLGLPPKHLLDG 349
SPE L G Y + D+WS+G LVEM G P+ SGS + + ++ PP L G
Sbjct: 190 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSG 249
Query: 350 A 350
Sbjct: 250 V 250
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 67
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 68 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 121
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 122 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRAALCGTLDYLP 177
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 68 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 121
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 122 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLP 177
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 65
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 66 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 119
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 120 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLCGTLDYLP 175
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 234
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 90
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 91 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 144
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 145 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRDDLCGTLDYLP 200
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 259
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 112/239 (46%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
+D ++I +GKG FG V A + + + +A+K++ + L + +E +L +EI +
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ--LEKEGVEHQLRREIEIQSH 70
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
N I+R+ +F R + L+ E LY L+ + T F ++L
Sbjct: 71 LRHPN---ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT--FMEELAD 125
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-RIYQYIQSRFYRSP 292
AL + E +IH D+KPEN+L+ + +KI DFG S R + Y P
Sbjct: 126 ALHYCH--ERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXMCGTLDYLPP 181
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV-LGLPPKHLLDGA 350
E++ G +D +D+W G + E G P F + + +IV V L PP L DG+
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP-FLSDGS 239
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 12/222 (5%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
+E +G G+F +VV A + A+K I K ++ IE ++ ++ K N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIA-VLRKIKHEN- 81
Query: 181 YYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLS 239
IV L+ + NHL LV +L+S L+D + F + +Q+ A+ +L
Sbjct: 82 --IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF--YTEKDASTLIRQVLDAVYYLH 137
Query: 240 TPELNIIHCDLKPENILL-CNPKRSAIKIVDFGSSCQLGQR--IYQYIQSRFYRSPEVLL 296
+ I+H DLKPEN+L + S I I DFG S G+ + + Y +PEVL
Sbjct: 138 --RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLA 195
Query: 297 GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
PY A+D WS+G I + G P F N+ +I++
Sbjct: 196 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKA 237
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 65 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 118
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 119 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLCGTLDYLP 174
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
KF D Y++ +GKG+F V + A KII KK Q + I K
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 176 DVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
N IVRL + LVF+L++ L++ + F S QQ+ +
Sbjct: 63 QHPN---IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILES 117
Query: 235 LLFLSTPELNIIHCDLKPENILLCN-PKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRS 291
+ + + I+H +LKPEN+LL + K +A+K+ DFG + ++ + + + + Y S
Sbjct: 118 IAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLS 175
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
PEVL PY +D+W+ G IL + G P F
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 61
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 62 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 115
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 116 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLP 171
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 172 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 230
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 112/239 (46%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
+D ++I +GKG FG V A + + + +A+K++ + L + +E +L +EI +
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ--LEKEGVEHQLRREIEIQSH 71
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
N I+R+ +F R + L+ E LY L+ + T F ++L
Sbjct: 72 LRHPN---ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT--FMEELAD 126
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-RIYQYIQSRFYRSP 292
AL + E +IH D+KPEN+L+ + +KI DFG S R + Y P
Sbjct: 127 ALHYCH--ERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXMCGTLDYLPP 182
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV-LGLPPKHLLDGA 350
E++ G +D +D+W G + E G P F + + +IV V L PP L DG+
Sbjct: 183 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP-FLSDGS 240
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
KF D Y++ +GKG+F V + A KII KK Q + I K
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 176 DVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
N IVRL + LVF+L++ L++ + F S QQ+ +
Sbjct: 63 QHPN---IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILES 117
Query: 235 LLFLSTPELNIIHCDLKPENILLCN-PKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRS 291
+ + + I+H +LKPEN+LL + K +A+K+ DFG + ++ + + + + Y S
Sbjct: 118 IAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLS 175
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
PEVL PY +D+W+ G IL + G P F
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 28/225 (12%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK-------NKKPFLNQAQIEVKLL 169
F + YE ++G+G V + A+KII + + + +K +
Sbjct: 2 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 61
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFS 228
+I+ K V+ I++LK + LVF+L+ L+D L + L+ K +
Sbjct: 62 DILRK--VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE------KVTLSEKET 113
Query: 229 QQLCTALL--FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYI 284
+++ ALL + +LNI+H DLKPENILL + IK+ DFG SCQL G+++ +
Sbjct: 114 RKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN--IKLTDFGFSCQLDPGEKLREVC 171
Query: 285 QSRFYRSPEVLLGI------PYDLAIDMWSLGCILVEMHTGEPLF 323
+ Y +PE++ Y +DMWS G I+ + G P F
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
KF D Y++ +GKG+F V + A KII KK Q + I K
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 176 DVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
N IVRL + LVF+L++ L++ + F S QQ+ +
Sbjct: 62 QHPN---IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILES 116
Query: 235 LLFLSTPELNIIHCDLKPENILLCN-PKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRS 291
+ + + I+H +LKPEN+LL + K +A+K+ DFG + ++ + + + + Y S
Sbjct: 117 IAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLS 174
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
PEVL PY +D+W+ G IL + G P F
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 68 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 121
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 122 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRDDLCGTLDYLP 177
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 65
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 66 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 119
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 120 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRDTLCGTLDYLP 175
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 234
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKII--KNKKPFLNQAQIEVKLLEIMNKADVNNTYYIV 184
IGKGSFG+V K D Q VAIKII + + + Q E+ +L + V YY
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK-YYGS 88
Query: 185 RLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
LK +W ++ E L + DLL + + ++ L +L + +
Sbjct: 89 YLKDTKLW-----IIMEYLGGGSALDLLEPGPLDETQIATILR---EILKGLDYLHSEKK 140
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRFYRSPEVLLGIPY 300
IH D+K N+LL + +K+ DFG + QL + ++ + F+ +PEV+ Y
Sbjct: 141 --IHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 301 DLAIDMWSLGCILVEMHTGEP 321
D D+WSLG +E+ GEP
Sbjct: 197 DSKADIWSLGITAIELARGEP 217
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 26/212 (12%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK---------PFLNQAQIEV 166
++ +Y S +G G+FG V A D E+ V +K IK +K P L + +E+
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 167 KLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLN--LT 224
+L + A+ I+++ F + LV E L DL + R L+ L
Sbjct: 81 AILSRVEHAN------IIKVLDIFENQGFFQLVMEKHGSGL-DLFAFID-RHPRLDEPLA 132
Query: 225 RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQ 282
+QL +A+ +L +IIH D+K ENI++ + IK++DFGS+ L G+ Y
Sbjct: 133 SYIFRQLVSAVGYLRLK--DIIHRDIKDENIVIA--EDFTIKLIDFGSAAYLERGKLFYT 188
Query: 283 YIQSRFYRSPEVLLGIPY-DLAIDMWSLGCIL 313
+ + Y +PEVL+G PY ++MWSLG L
Sbjct: 189 FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTL 220
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IGKGSFG+V K D + VAIKII ++ I+ ++ ++++ D + YI R
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCD---SPYITRY 82
Query: 187 KRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
++ L ++ E L + DLL+ + + ++ L +L +
Sbjct: 83 FGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR---EILKGLDYLHSE--RK 137
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRFYRSPEVLLGIPYDL 302
IH D+K N+LL ++ +K+ DFG + QL + ++ + F+ +PEV+ YD
Sbjct: 138 IHRDIKAANVLLS--EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDF 195
Query: 303 AIDMWSLGCILVEMHTGEP 321
D+WSLG +E+ GEP
Sbjct: 196 KADIWSLGITAIELAKGEP 214
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 112/239 (46%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
+D ++I +GKG FG V A + + + +A+K++ + L + +E +L +EI +
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ--LEKEGVEHQLRREIEIQSH 70
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
N I+R+ +F R + L+ E LY L+ + T F ++L
Sbjct: 71 LRHPN---ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT--FMEELAD 125
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-RIYQYIQSRFYRSP 292
AL + E +IH D+KPEN+L+ + +KI DFG S R + Y P
Sbjct: 126 ALHYCH--ERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXMCGTLDYLPP 181
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV-LGLPPKHLLDGA 350
E++ G +D +D+W G + E G P F + + +IV V L PP L DG+
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP-FLSDGS 239
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 16/238 (6%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 69
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
N I+RL +F + L+ E +Y L+ + T + +L
Sbjct: 70 LRHPN---ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS--KFDEQRTATYITELAN 124
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRSP 292
AL + + +IH D+KPEN+LL + +KI DFG S R + Y P
Sbjct: 125 ALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLXGTLDYLPP 180
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
E++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 66
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 67 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 120
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI +FG S R + Y
Sbjct: 121 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIANFGWSVHAPSSRRTTLCGTLDYLP 176
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 235
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI---EVKLLEIMN 173
F Y++ +GKG+F V + + A KII KK Q E ++ ++
Sbjct: 20 FQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLK 79
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGV-SLNLTRKFSQQLC 232
+ IVRL H L+F+L++ +L + R S QQ+
Sbjct: 80 HPN------IVRLHDSISEEGHHYLIFDLVTGG--ELFEDIVAREYYSEADASHCIQQIL 131
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNP-KRSAIKIVDFGSSCQL---GQRIYQYIQSRF 288
A+L ++ ++H DLKPEN+LL + K +A+K+ DFG + ++ Q + + +
Sbjct: 132 EAVLHCH--QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPG 189
Query: 289 YRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
Y SPEVL PY +D+W+ G IL + G P F
Sbjct: 190 YLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKII--KNKKPFLNQAQIEVKLLEIMNKADVNNTYYIV 184
IGKGSFG+V K D Q VAIKII + + + Q E+ +L + V YY
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK-YYGS 73
Query: 185 RLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
LK +W ++ E L + DLL + + ++ L +L + +
Sbjct: 74 YLKDTKLW-----IIMEYLGGGSALDLLEPGPLDETQIATILR---EILKGLDYLHSEKK 125
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRFYRSPEVLLGIPY 300
IH D+K N+LL + +K+ DFG + QL + ++ + F+ +PEV+ Y
Sbjct: 126 --IHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 301 DLAIDMWSLGCILVEMHTGEP 321
D D+WSLG +E+ GEP
Sbjct: 182 DSKADIWSLGITAIELARGEP 202
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 114/242 (47%), Gaps = 22/242 (9%)
Query: 106 NHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIE 165
+ D + + E+ D E +G+GS+G V KA E VAIK + P + Q
Sbjct: 19 DEDSLTKQPEEVFDVLE---KLGEGSYGSVYKAIHKETGQIVAIKQV----PVESDLQEI 71
Query: 166 VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLT 224
+K + IM + D + ++V+ + L +V E + ++ D++R N + ++ +
Sbjct: 72 IKEISIMQQCD---SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEI 127
Query: 225 RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ-- 282
Q L +L + IH D+K NILL + K+ DFG + QL + +
Sbjct: 128 ATILQSTLKGLEYLHF--MRKIHRDIKAGNILLNTEGHA--KLADFGVAGQLTDXMAKRN 183
Query: 283 -YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGL 341
I + F+ +PEV+ I Y+ D+WSLG +EM G+P ++ ++ M I +
Sbjct: 184 XVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYA---DIHPMRAIFMIPTN 240
Query: 342 PP 343
PP
Sbjct: 241 PP 242
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKII--KNKKPFLNQAQIEVKLLEIMNKADVNNTYYIV 184
IGKGSFG+V K D Q VAIKII + + + Q E+ +L + V YY
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK-YYGS 93
Query: 185 RLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
LK +W ++ E L + DLL + + ++ L +L + +
Sbjct: 94 YLKDTKLW-----IIMEYLGGGSALDLLEPGPLDETQIATILR---EILKGLDYLHSEKK 145
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRFYRSPEVLLGIPY 300
IH D+K N+LL + +K+ DFG + QL + ++ + F+ +PEV+ Y
Sbjct: 146 --IHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 201
Query: 301 DLAIDMWSLGCILVEMHTGEP 321
D D+WSLG +E+ GEP
Sbjct: 202 DSKADIWSLGITAIELARGEP 222
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKII--KNKKPFLNQAQIEVKLLEIMNKADVNNTYYIV 184
IGKGSFG+V K D Q VAIKII + + + Q E+ +L + V YY
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK-YYGS 73
Query: 185 RLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
LK +W ++ E L + DLL + + ++ L +L + +
Sbjct: 74 YLKDTKLW-----IIMEYLGGGSALDLLEPGPLDETQIATILR---EILKGLDYLHSEKK 125
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRFYRSPEVLLGIPY 300
IH D+K N+LL + +K+ DFG + QL + ++ + F+ +PEV+ Y
Sbjct: 126 --IHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 301 DLAIDMWSLGCILVEMHTGEP 321
D D+WSLG +E+ GEP
Sbjct: 182 DSKADIWSLGITAIELARGEP 202
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 17/231 (7%)
Query: 120 RYEIDSLIGKGSFGQV--VKAFDLEEQCHV-AIKIIKNKKPFLNQAQIEVKLLEIMNKAD 176
++E+ ++G+GSFG+V VK + + A+K++K K + ++ K+ E +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-KATLKVRDRVRTKM-ERDILVE 82
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-QQLCTAL 235
VN+ + IV+L F L L+ + L DL + + KF +L AL
Sbjct: 83 VNHPF-IVKLHYAFQTEGKLYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 236 LFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRSP 292
L + L II+ DLKPENILL + IK+ DFG S ++ Y + + Y +P
Sbjct: 140 DHLHS--LGIIYRDLKPENILL--DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAP 195
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV-LGLP 342
EV+ + + D WS G ++ EM TG F G + + M I++ LG+P
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 28/227 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG+GS G V A + VA+K + +K Q + E+ E++ D ++ +V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRK----QQRRELLFNEVVIMRDYHHDN-VVDM 107
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFR-----GVSLNLTRKFSQQLCTALLFLST 240
++ + L +V E L L D++ +T V L++ R AL +L
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLR--------ALSYLHN 159
Query: 241 PELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRFYRSPEVLLG 297
+IH D+K ++ILL + R IK+ DFG Q+ + + + + + ++ +PEV+
Sbjct: 160 Q--GVIHRDIKSDSILLTSDGR--IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISR 215
Query: 298 IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPK 344
+PY +D+WSLG +++EM GEP + + M +I + LPP+
Sbjct: 216 LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD--SLPPR 260
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 68 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELA 121
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI +FG S R + Y
Sbjct: 122 NALSYCHSK--RVIHRDIKPENLLLGSA--GELKIANFGWSVHAPSSRRTTLCGTLDYLP 177
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 16/238 (6%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ +EI +GKG FG V A + + + +A+K++ K L +A +E +L +EI +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 69
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
N I+RL +F + L+ E +Y L+ + T + +L
Sbjct: 70 LRHPN---ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS--KFDEQRTATYITELAN 124
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRSP 292
AL + + +IH D+KPEN+LL + +KI DFG S R + Y P
Sbjct: 125 ALSYCHSK--RVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPP 180
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
E++ G +D +D+WSLG + E G+P F + + +I V P + +GA
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 132/303 (43%), Gaps = 58/303 (19%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
++ +E +++G+G+FGQVVKA + + + AIK I++ + L+ EV LL +N
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 176 DVNNTYYIVRLKRHFMWRNHL---------CLVFELLSY----NLYDLLRNTNFRGVSLN 222
V YY L+R RN + +F + Y LYDL+ + N
Sbjct: 63 YVVR-YYAAWLER----RNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 223 LTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL------ 276
R F +Q+ AL ++ + IIH DLKP NI + + +KI DFG + +
Sbjct: 118 YWRLF-RQILEALSYIHSQ--GIIHRDLKPMNIFIDESRN--VKIGDFGLAKNVHRSLDI 172
Query: 277 -----------GQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFS 324
+ I + Y + EVL G Y+ IDM+SLG I EM P +
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFST 230
Query: 325 GSNEVDQMNKIVEV-LGLPPKHLLDGAHKTRKYFD--KMPDGSYILKKPKDGRKPKVPGS 381
G V+ + K+ V + PP FD KM I++ D K PG+
Sbjct: 231 GMERVNILKKLRSVSIEFPPD------------FDDNKMKVEKKIIRLLIDHDPNKRPGA 278
Query: 382 RRL 384
R L
Sbjct: 279 RTL 281
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIM 172
+ Y + IGKG+F +V A + VA+KII K LN + EV++++I+
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIID--KTQLNPTSLQKLFREVRIMKIL 71
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQL 231
N ++ + ++ ++ L LV E S ++D L + R KF +Q+
Sbjct: 72 NHPNIVKLFEVIETEKT------LYLVMEYASGGEVFDYLV-AHGRMKEKEARAKF-RQI 123
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--LGQRIYQYIQSRFY 289
+A+ + + I+H DLK EN+LL IKI DFG S + +G ++ + S Y
Sbjct: 124 VSAVQYCH--QKYIVHRDLKAENLLLDGDMN--IKIADFGFSNEFTVGNKLDTFCGSPPY 179
Query: 290 RSPEVLLGIPYDL-AIDMWSLGCILVEMHTGEPLFSGSN 327
+PE+ G YD +D+WSLG IL + +G F G N
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
++ +E +++G+G+FGQVVKA + + + AIK I++ + L+ EV LL +N
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 176 DVNNTYYIVRLKRHFM-------WRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKF 227
V Y +R+F+ ++ L + E + LYDL+ + N R F
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 228 SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL----------- 276
+Q+ AL ++ + IIH DLKP NI + + +KI DFG + +
Sbjct: 123 -RQILEALSYIHSQ--GIIHRDLKPMNIFIDESRN--VKIGDFGLAKNVHRSLDILKLDS 177
Query: 277 ------GQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+ I + Y + EVL G Y+ IDM+SLG I EM P +G V
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERV 235
Query: 330 DQMNKIVEV-LGLPPKHLLDGAHKTRKYFD--KMPDGSYILKKPKDGRKPKVPGSRRL 384
+ + K+ V + PP FD KM I++ D K PG+R L
Sbjct: 236 NILKKLRSVSIEFPPD------------FDDNKMKVEKKIIRLLIDHDPNKRPGARTL 281
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D Y++ +GKG+F V + + A KII KK L + +
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKK------------LSARDHQKLE 51
Query: 179 NTYYIVRLKRH-FMWRNHLCLVFELLSYNLYDLLRNTNFRG--VSLNLTRKFSQQLCTAL 235
I RL +H + R H + E Y ++DL+ V+ + C
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQ 111
Query: 236 LFLSTPELN---IIHCDLKPENILLCN-PKRSAIKIVDFGSSCQLG---QRIYQYIQSRF 288
+ S + I+H DLKPEN+LL + K +A+K+ DFG + ++ Q + + +
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPG 171
Query: 289 YRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
Y SPEVL PY +DMW+ G IL + G P F
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 25/270 (9%)
Query: 76 KKKRRAQQSQGEDSSHKKEKKLYNEGYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQV 135
+K RA+ QG + +K ++ ++ N D + FL ++GKGSFG+V
Sbjct: 304 QKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFL------MVLGKGSFGKV 357
Query: 136 VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNH 195
+ + A+KI+K K + +E ++E A ++ +L F +
Sbjct: 358 MLSERKGTDELYAVKILK-KDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416
Query: 196 LCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPE 253
L V E ++ +Y + + F+ ++ ++ L FL + II+ DLK +
Sbjct: 417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVF---YAAEIAIGLFFLQSK--GIIYRDLKLD 471
Query: 254 NILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF------YRSPEVLLGIPYDLAIDMW 307
N++L IKI DFG C+ + I+ + ++ Y +PE++ PY ++D W
Sbjct: 472 NVML--DSEGHIKIADFGM-CK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWW 526
Query: 308 SLGCILVEMHTGEPLFSGSNEVDQMNKIVE 337
+ G +L EM G+ F G +E + I+E
Sbjct: 527 AFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNK-KPFLNQAQIEVKLLEIM 172
GE D +E S +G G+ G V K +A K+I + KP + QI ++ L+++
Sbjct: 63 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-QI-IRELQVL 120
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
++ N+ YIV F + + E + D + R + + K S +
Sbjct: 121 HEC---NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVI 176
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYIQSRFYRS 291
L +L + I+H D+KP NIL+ + R IK+ DFG S QL + ++ +R Y S
Sbjct: 177 KGLTYLRE-KHKIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMS 233
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTG 319
PE L G Y + D+WS+G LVEM G
Sbjct: 234 PERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
DRYE+ IG G+FG D + VA+K I+ + + EI+N +
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVK-----REIINHRSLR 73
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
+ IVR K + HL +V E S L++ R N S + R F QQL + + +
Sbjct: 74 HPN-IVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 238 LSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQYIQSRFYRSPEVL 295
+ + H DLK EN LL +KI DFG S L + + + Y +PEVL
Sbjct: 131 CHA--MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 296 LGIPYDLAI-DMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV 336
L YD + D+WS G L M G F E K +
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 17/231 (7%)
Query: 120 RYEIDSLIGKGSFGQV--VKAFDLEEQCHV-AIKIIKNKKPFLNQAQIEVKLLEIMNKAD 176
++E+ ++G+GSFG+V VK + + A+K++K K + ++ K+ E +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-KATLKVRDRVRTKM-ERDILVE 83
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-QQLCTAL 235
VN+ + IV+L F L L+ + L DL + + KF +L AL
Sbjct: 84 VNHPF-IVKLHYAFQTEGKLYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALAL 140
Query: 236 LFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRSP 292
L + L II+ DLKPENILL + IK+ DFG S ++ Y + + Y +P
Sbjct: 141 DHLHS--LGIIYRDLKPENILL--DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAP 196
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV-LGLP 342
EV+ + + D WS G ++ EM TG F G + + M I++ LG+P
Sbjct: 197 EVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 17/231 (7%)
Query: 120 RYEIDSLIGKGSFGQV--VKAFDLEEQCHV-AIKIIKNKKPFLNQAQIEVKLLEIMNKAD 176
++E+ ++G+GSFG+V VK + + A+K++K K + ++ K+ E +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-KATLKVRDRVRTKM-ERDILVE 82
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-QQLCTAL 235
VN+ + IV+L F L L+ + L DL + + KF +L AL
Sbjct: 83 VNHPF-IVKLHYAFQTEGKLYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 236 LFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRSP 292
L + L II+ DLKPENILL + IK+ DFG S ++ Y + + Y +P
Sbjct: 140 DHLHS--LGIIYRDLKPENILL--DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAP 195
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV-LGLP 342
EV+ + + D WS G ++ EM TG F G + + M I++ LG+P
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 15/222 (6%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKAD 176
F D YE+ +IGKG F V + + E A+KI+ K F + + + ++ +A
Sbjct: 24 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAK-FTSSPGLSTE--DLKREAS 80
Query: 177 VNNTY---YIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGV-SLNLTRKFSQQ 230
+ + +IV L + L +VFE + +++++ + V S + + +Q
Sbjct: 81 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 140
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQR---IYQYIQS 286
+ AL + + NIIH D+KP +LL + + SA +K+ FG + QLG+ + +
Sbjct: 141 ILEALRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGT 198
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNE 328
+ +PEV+ PY +D+W G IL + +G F G+ E
Sbjct: 199 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 240
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 414 KDLIFRMLDYDPKTRITPYYALQHNFFK 441
KDL+ RML DP RIT Y AL H + K
Sbjct: 266 KDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D Y++ +GKG+F V + + A KII KK L + +
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKK------------LSARDHQKLE 51
Query: 179 NTYYIVRLKRH-FMWRNHLCLVFELLSYNLYDLLRNTNFRG--VSLNLTRKFSQQLCTAL 235
I RL +H + R H + E Y ++DL+ V+ + C
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQ 111
Query: 236 LFLSTPELN---IIHCDLKPENILLCN-PKRSAIKIVDFGSSCQLG---QRIYQYIQSRF 288
+ S + I+H DLKPEN+LL + K +A+K+ DFG + ++ Q + + +
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPG 171
Query: 289 YRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
Y SPEVL PY +DMW+ G IL + G P F
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 15/222 (6%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKAD 176
F D YE+ +IGKG F V + + E A+KI+ K F + + + ++ +A
Sbjct: 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAK-FTSSPGLSTE--DLKREAS 78
Query: 177 VNNTY---YIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGV-SLNLTRKFSQQ 230
+ + +IV L + L +VFE + +++++ + V S + + +Q
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQR---IYQYIQS 286
+ AL + + NIIH D+KP +LL + + SA +K+ FG + QLG+ + +
Sbjct: 139 ILEALRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGT 196
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNE 328
+ +PEV+ PY +D+W G IL + +G F G+ E
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 414 KDLIFRMLDYDPKTRITPYYALQHNFFK 441
KDL+ RML DP RIT Y AL H + K
Sbjct: 264 KDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ ++I +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQ--LEKAGVEHQLRREVEIQSH 68
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 69 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF---DEQRTATYITELA 122
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 123 NALSYCHSK--RVIHRDIKPENLLLGS--NGELKIADFGWSVHAPSSRRTTLCGTLDYLP 178
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G P F + +I V P + +GA
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGA 237
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
DRYE+ IG G+FG D + VA+K I+ + + EI+N +
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK-----REIINHRSLR 73
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
+ IVR K + HL +V E S L++ R N S + R F QQL + + +
Sbjct: 74 HPN-IVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 238 LSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVL 295
+ + H DLK EN LL +KI DFG S L + + + Y +PEVL
Sbjct: 131 AHA--MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVL 188
Query: 296 LGIPYDLAI-DMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV 336
L YD + D+WS G L M G F E K +
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 11/222 (4%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
++ + + ++GKGSFG+V A + AIK +K K L +E ++E +
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALK-KDVVLMDDDVECTMVEKRVLSLA 74
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNT-NFRGVSLNLTRKFSQQLCTALL 236
++ + F + +L V E L N DL+ + + L+ ++ ++ L
Sbjct: 75 WEHPFLTHMFCTFQTKENLFFVMEYL--NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--LGQ-RIYQYIQSRFYRSPE 293
FL + I++ DLK +NILL K IKI DFG + LG + + + Y +PE
Sbjct: 133 FLHSK--GIVYRDLKLDNILL--DKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPE 188
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
+LLG Y+ ++D WS G +L EM G+ F G +E + + I
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI---EVKLLEIM 172
+F + Y++ +GKG+F V + + A II KK Q E ++ ++
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ IVRL H L+F+L++ D++ + + QQ
Sbjct: 68 KHPN------IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---HCIQQ 118
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNP-KRSAIKIVDFGSSCQL---GQRIYQYIQS 286
+ A+L ++ ++H +LKPEN+LL + K +A+K+ DFG + ++ Q + + +
Sbjct: 119 ILEAVLHCH--QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGT 176
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
Y SPEVL PY +D+W+ G IL + G P F
Sbjct: 177 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNK-KPFLNQAQIEVKLLEIM 172
GE D +E S +G G+ G V K +A K+I + KP + QI ++ L+++
Sbjct: 4 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-QI-IRELQVL 61
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
++ N+ YIV F + + E + D + R + + K S +
Sbjct: 62 HEC---NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVI 117
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
L +L I+H D+KP NIL+ + R IK+ DFG S QL + +++ +R Y S
Sbjct: 118 KGLTYLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDEMANEFVGTRSYMS 174
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTG 319
PE L G Y + D+WS+G LVEM G
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 21/207 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN---QAQI--EVKLLEIM 172
+ Y+I +G+GSFG+V A+ VA+KII NKK Q +I E+ L ++
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-NKKVLAKSDMQGRIEREISYLRLL 71
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+ Y +++ K + + +V E L+D + + +S R+F QQ+
Sbjct: 72 RHPHIIKLYDVIKSK------DEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQII 123
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYR 290
+A+ + + I+H DLKPEN+LL + +KI DFG S + G + S Y
Sbjct: 124 SAVEYCHRHK--IVHRDLKPENLLL--DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 179
Query: 291 SPEVLLGIPY-DLAIDMWSLGCILVEM 316
+PEV+ G Y +D+WS G IL M
Sbjct: 180 APEVISGKLYAGPEVDVWSCGVILYVM 206
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 21/207 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN---QAQI--EVKLLEIM 172
+ Y+I +G+GSFG+V A+ VA+KII NKK Q +I E+ L ++
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-NKKVLAKSDMQGRIEREISYLRLL 70
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+ Y +++ K + + +V E L+D + + +S R+F QQ+
Sbjct: 71 RHPHIIKLYDVIKSK------DEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQII 122
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYR 290
+A+ + + I+H DLKPEN+LL + +KI DFG S + G + S Y
Sbjct: 123 SAVEYCHRHK--IVHRDLKPENLLL--DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 178
Query: 291 SPEVLLGIPY-DLAIDMWSLGCILVEM 316
+PEV+ G Y +D+WS G IL M
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVILYVM 205
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
DRYE+ IG G+FG D + VA+K I+ + + EI+N +
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK-----REIINHRSLR 72
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
+ IVR K + HL +V E S L++ R N S + R F QQL + + +
Sbjct: 73 HPN-IVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 129
Query: 238 LSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQYIQSRFYRSPEVL 295
+ + H DLK EN LL +KI DFG S L + + + Y +PEVL
Sbjct: 130 CHA--MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 187
Query: 296 LGIPYDLAI-DMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV 336
L YD + D+WS G L M G F E K +
Sbjct: 188 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 229
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 18/239 (7%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL---LEIMNK 174
L+ ++I +GKG FG V A + + + +A+K++ + L +A +E +L +EI +
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQ--LEKAGVEHQLRREVEIQSH 68
Query: 175 ADVNNTYYIVRLKRHF--MWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+RL +F R +L L + L +L + + F T + +L
Sbjct: 69 LRHPN---ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF---DEQRTATYITELA 122
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRFYRS 291
AL + + +IH D+KPEN+LL + +KI DFG S R + Y
Sbjct: 123 NALSYCHSK--RVIHRDIKPENLLLGS--NGELKIADFGWSVHAPSSRRDTLCGTLDYLP 178
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGA 350
PE++ G +D +D+WSLG + E G P F + +I V P + +GA
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGA 237
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+F D Y++ +GKG+F V + A KII KK L +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKK------------LSARDHQ 75
Query: 176 DVNNTYYIVRLKRH-FMWRNHLCLVFELLSYNLYDLLRNTNFRG--VSLNLTRKFSQQLC 232
+ I RL +H + R H + E Y ++DL+ V+ + C
Sbjct: 76 KLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHC 135
Query: 233 TALLFLSTPEL---NIIHCDLKPENILLCNP-KRSAIKIVDFGSSCQLG---QRIYQYIQ 285
+ S + +I+H DLKPEN+LL + K +A+K+ DFG + ++ Q + +
Sbjct: 136 IHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAG 195
Query: 286 SRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+ Y SPEVL PY +D+W+ G IL + G P F
Sbjct: 196 TPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIM 172
+ Y + IGKG+F +V A + VA+KII K LN + + EV++++++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIID--KTQLNSSSLQKLFREVRIMKVL 70
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQL 231
N ++ + ++ ++ L LV E S ++D L + R KF +Q+
Sbjct: 71 NHPNIVKLFEVIETEKT------LYLVMEYASGGEVFDYLV-AHGRMKEKEARAKF-RQI 122
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--LGQRIYQYIQSRFY 289
+A+ + + I+H DLK EN+LL IKI DFG S + G ++ + S Y
Sbjct: 123 VSAVQYCH--QKFIVHRDLKAENLLL--DADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 178
Query: 290 RSPEVLLGIPYDL-AIDMWSLGCILVEMHTGEPLFSGSN 327
+PE+ G YD +D+WSLG IL + +G F G N
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 21/207 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN---QAQI--EVKLLEIM 172
+ Y+I +G+GSFG+V A+ VA+KII NKK Q +I E+ L ++
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-NKKVLAKSDMQGRIEREISYLRLL 65
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+ Y +++ K + + +V E L+D + + +S R+F QQ+
Sbjct: 66 RHPHIIKLYDVIKSK------DEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQII 117
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYR 290
+A+ + + I+H DLKPEN+LL + +KI DFG S + G + S Y
Sbjct: 118 SAVEYCHRHK--IVHRDLKPENLLL--DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 173
Query: 291 SPEVLLGIPY-DLAIDMWSLGCILVEM 316
+PEV+ G Y +D+WS G IL M
Sbjct: 174 APEVISGKLYAGPEVDVWSCGVILYVM 200
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 23/219 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIM 172
+ Y + IGKG+F +V A + VA++II K LN + + EV++++++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIID--KTQLNSSSLQKLFREVRIMKVL 70
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQL 231
N ++ + ++ ++ L LV E S ++D L + R KF +Q+
Sbjct: 71 NHPNIVKLFEVIETEKT------LYLVMEYASGGEVFDYLV-AHGRMKEKEARAKF-RQI 122
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--LGQRIYQYIQSRFY 289
+A+ + + I+H DLK EN+LL IKI DFG S + G ++ ++ S Y
Sbjct: 123 VSAVQYCH--QKFIVHRDLKAENLLL--DADMNIKIADFGFSNEFTFGNKLDEFCGSPPY 178
Query: 290 RSPEVLLGIPYDL-AIDMWSLGCILVEMHTGEPLFSGSN 327
+PE+ G YD +D+WSLG IL + +G F G N
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIM 172
+ Y + IGKG+F +V A + VAIKII K LN + EV++++I+
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIID--KTQLNPTSLQKLFREVRIMKIL 68
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQL 231
N ++ + ++ ++ L L+ E S ++D L + R KF +Q+
Sbjct: 69 NHPNIVKLFEVIETEKT------LYLIMEYASGGEVFDYLV-AHGRMKEKEARSKF-RQI 120
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--LGQRIYQYIQSRFY 289
+A+ + + I+H DLK EN+LL IKI DFG S + +G ++ + S Y
Sbjct: 121 VSAVQYCH--QKRIVHRDLKAENLLL--DADMNIKIADFGFSNEFTVGGKLDTFCGSPPY 176
Query: 290 RSPEVLLGIPYDL-AIDMWSLGCILVEMHTGEPLFSGSN 327
+PE+ G YD +D+WSLG IL + +G F G N
Sbjct: 177 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII--KNKKPFLNQAQIEVKLLEI 171
GE D +E S +G G+ G V K +A K+I + K NQ ++ L++
Sbjct: 28 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI---IRELQV 84
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQL 231
+++ N+ YIV F + + E + D + R + + K S +
Sbjct: 85 LHEC---NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAV 140
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYIQSRFYR 290
L +L I+H D+KP NIL+ + R IK+ DFG S QL + ++ +R Y
Sbjct: 141 IKGLTYLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYM 197
Query: 291 SPEVLLGIPYDLAIDMWSLGCILVEMHTG 319
SPE L G Y + D+WS+G LVEM G
Sbjct: 198 SPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIM 172
+ Y + IGKG+F +V A + VA+KII K LN + + EV++++++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIID--KTQLNSSSLQKLFREVRIMKVL 70
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQL 231
N ++ + ++ ++ L LV E S ++D L + R KF +Q+
Sbjct: 71 NHPNIVKLFEVIETEKT------LYLVMEYASGGEVFDYLV-AHGRMKEKEARAKF-RQI 122
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--LGQRIYQYIQSRFY 289
+A+ + + I+H DLK EN+LL IKI DFG S + G ++ + S Y
Sbjct: 123 VSAVQYCH--QKFIVHRDLKAENLLL--DADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 178
Query: 290 RSPEVLLGIPYDL-AIDMWSLGCILVEMHTGEPLFSGSN 327
+PE+ G YD +D+WSLG IL + +G F G N
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 21/207 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN---QAQI--EVKLLEIM 172
+ Y+I +G+GSFG+V A+ VA+KII NKK Q +I E+ L ++
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-NKKVLAKSDMQGRIEREISYLRLL 61
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+ Y +++ K + + +V E L+D + + +S R+F QQ+
Sbjct: 62 RHPHIIKLYDVIKSK------DEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQII 113
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYR 290
+A+ + + I+H DLKPEN+LL + +KI DFG S + G + S Y
Sbjct: 114 SAVEYCHRHK--IVHRDLKPENLLL--DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 169
Query: 291 SPEVLLGIPY-DLAIDMWSLGCILVEM 316
+PEV+ G Y +D+WS G IL M
Sbjct: 170 APEVISGKLYAGPEVDVWSCGVILYVM 196
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIM 172
+ Y + IGKG+F +V A + VA+KII K LN + + EV++++++
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIID--KTQLNSSSLQKLFREVRIMKVL 63
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQL 231
N ++ + ++ ++ L LV E S ++D L + + R +Q+
Sbjct: 64 NHPNIVKLFEVIETEKT------LYLVMEYASGGEVFDYLVAHGW--MKEKEARAKFRQI 115
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--LGQRIYQYIQSRFY 289
+A+ + + I+H DLK EN+LL IKI DFG S + G ++ + S Y
Sbjct: 116 VSAVQYCH--QKFIVHRDLKAENLLL--DADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 171
Query: 290 RSPEVLLGIPYDL-AIDMWSLGCILVEMHTGEPLFSGSN 327
+PE+ G YD +D+WSLG IL + +G F G N
Sbjct: 172 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNK-KPFLNQAQIEVKLLEIMNKADV 177
D +E S +G G+ G V K +A K+I + KP + QI ++ L+++++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-QI-IRELQVLHEC-- 61
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
N+ YIV F + + E + D + R + + K S + L +
Sbjct: 62 -NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTY 119
Query: 238 LSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYIQSRFYRSPEVLL 296
L I+H D+KP NIL+ + R IK+ DFG S QL + ++ +R Y SPE L
Sbjct: 120 LREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQ 176
Query: 297 GIPYDLAIDMWSLGCILVEMHTG 319
G Y + D+WS+G LVEM G
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 32/220 (14%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D Y++ IGKG+F V + L A KII KK L + +
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKK------------LSARDHQKLE 51
Query: 179 NTYYIVRLKRHF-MWRNHLCLVFELLSYNLYDLLRNTN-FRGVSLNLTRKFS-------- 228
I RL +H + R H + E Y ++DL+ F + + R++
Sbjct: 52 REARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDI---VAREYYSEADASHC 108
Query: 229 -QQLCTALLFLSTPELNIIHCDLKPENILLCNP-KRSAIKIVDFGSSCQLG---QRIYQY 283
QQ+ A+L ++ ++H DLKPEN+LL + K +A+K+ DFG + ++ Q + +
Sbjct: 109 IQQILEAVLHCH--QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGF 166
Query: 284 IQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+ Y SPEVL Y +D+W+ G IL + G P F
Sbjct: 167 AGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNK-KPFLNQAQIEVKLLEIMNKADV 177
D +E S +G G+ G V K +A K+I + KP + QI ++ L+++++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-QI-IRELQVLHEC-- 61
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
N+ YIV F + + E + D + R + + K S + L +
Sbjct: 62 -NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTY 119
Query: 238 LSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYIQSRFYRSPEVLL 296
L I+H D+KP NIL+ + R IK+ DFG S QL + ++ +R Y SPE L
Sbjct: 120 LREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQ 176
Query: 297 GIPYDLAIDMWSLGCILVEMHTG 319
G Y + D+WS+G LVEM G
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 96/223 (43%), Gaps = 14/223 (6%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
DRY+ IG G+FG D + VA+K I+ Q EI+N +
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ-----REIINHRSLR 74
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
+ IVR K + HL ++ E S LY+ R N S + R F QQL + + +
Sbjct: 75 HPN-IVRFKEVILTPTHLAIIMEYASGGELYE--RICNAGRFSEDEARFFFQQLLSGVSY 131
Query: 238 LSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQYIQSRFYRSPEVL 295
+ + I H DLK EN LL +KI DFG S L + + + Y +PEVL
Sbjct: 132 CHS--MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 189
Query: 296 LGIPYDLAI-DMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVE 337
L YD I D+WS G L M G F E K ++
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQ 232
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 117/269 (43%), Gaps = 21/269 (7%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
++G G+F +V A+K IK K P + +E ++ ++ K N IV
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIK-KSPAFRDSSLENEI-AVLKKIKHEN---IVT 70
Query: 186 LKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFS-QQLCTALLFLSTPEL 243
L+ + H LV +L+S L+D + RGV QQ+ +A+ +L E
Sbjct: 71 LEDIYESTTHYYLVMQLVSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLH--EN 125
Query: 244 NIIHCDLKPENILLCNPKR-SAIKIVDFG-SSCQLGQRIYQYIQSRFYRSPEVLLGIPYD 301
I+H DLKPEN+L P+ S I I DFG S + + + Y +PEVL PY
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYS 185
Query: 302 LAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKTRKYF---- 357
A+D WS+G I + G P F E KI E D ++ K F
Sbjct: 186 KAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHL 245
Query: 358 -DKMPDGSYILKKPKDGRKPKVPGSRRLH 385
+K P+ Y +K P + G+ LH
Sbjct: 246 LEKDPNERYTCEKALS--HPWIDGNTALH 272
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNK-KPFLNQAQIEVKLLEIMNKADV 177
D +E S +G G+ G V K +A K+I + KP + QI ++ L+++++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-QI-IRELQVLHEC-- 61
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
N+ YIV F + + E + D + R + + K S + L +
Sbjct: 62 -NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTY 119
Query: 238 LSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYIQSRFYRSPEVLL 296
L I+H D+KP NIL+ + R IK+ DFG S QL + ++ +R Y SPE L
Sbjct: 120 LREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQ 176
Query: 297 GIPYDLAIDMWSLGCILVEMHTG 319
G Y + D+WS+G LVEM G
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 146/316 (46%), Gaps = 39/316 (12%)
Query: 62 LIKTYKHINEVYYAKKKRRAQQSQ-----GEDSSHKKEKKLYNEGYDDDNHDYIIQHGE- 115
L+ H+ +Y+ + R + G S ++ +++ +E + ++ G+
Sbjct: 14 LVPRGSHMENLYFQGARARQENGMPEKPPGPRSPQREPQRVSHEQFRAALQ-LVVDPGDP 72
Query: 116 -KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNK 174
+LD + IG+GS G V A VA+K + +K Q + E+ E++
Sbjct: 73 RSYLDNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIM 125
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
D + +V + ++ + L +V E L L D++ +T + + +C
Sbjct: 126 RDYQHEN-VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-------MNEEQIAAVCL 177
Query: 234 ALL-FLSTPEL-NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRF 288
A+L LS +IH D+K ++ILL + R +K+ DFG Q+ + + + + + +
Sbjct: 178 AVLQALSVLHAQGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPY 235
Query: 289 YRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLD 348
+ +PE++ +PY +D+WSLG +++EM GEP + + M I + LPP+ L
Sbjct: 236 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPR--LK 291
Query: 349 GAHKT----RKYFDKM 360
HK + + D++
Sbjct: 292 NLHKVSPSLKGFLDRL 307
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIM 172
+ Y + IGKG+F +V A + VA++II K LN + + EV++++++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIID--KTQLNSSSLQKLFREVRIMKVL 70
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQL 231
N ++ + ++ ++ L LV E S ++D L + R KF +Q+
Sbjct: 71 NHPNIVKLFEVIETEKT------LYLVMEYASGGEVFDYLV-AHGRMKEKEARAKF-RQI 122
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--LGQRIYQYIQSRFY 289
+A+ + + I+H DLK EN+LL IKI DFG S + G ++ + S Y
Sbjct: 123 VSAVQYCH--QKFIVHRDLKAENLLL--DADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 178
Query: 290 RSPEVLLGIPYDL-AIDMWSLGCILVEMHTGEPLFSGSN 327
+PE+ G YD +D+WSLG IL + +G F G N
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIM 172
+ Y + IGKG+F +V A + VA+KII K LN + + EV++++++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIID--KTQLNSSSLQKLFREVRIMKVL 70
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQL 231
N ++ + ++ ++ L LV E S ++D L + R KF +Q+
Sbjct: 71 NHPNIVKLFEVIETEKT------LYLVMEYASGGEVFDYLV-AHGRMKEKEARAKF-RQI 122
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--LGQRIYQYIQSRFY 289
+A+ + + I+H DLK EN+LL IKI DFG S + G ++ + + Y
Sbjct: 123 VSAVQYCH--QKFIVHRDLKAENLLL--DADMNIKIADFGFSNEFTFGNKLDAFCGAPPY 178
Query: 290 RSPEVLLGIPYDL-AIDMWSLGCILVEMHTGEPLFSGSN 327
+PE+ G YD +D+WSLG IL + +G F G N
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
++GKGSFG+V+ + A+KI+K K + +E ++E A ++ +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILK-KDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 85
Query: 186 LKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
L F + L V E ++ +Y + + F+ ++ ++ L FL +
Sbjct: 86 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF---YAAEIAIGLFFLQSK-- 140
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF------YRSPEVLLG 297
II+ DLK +N++L IKI DFG C+ + I+ + ++ Y +PE++
Sbjct: 141 GIIYRDLKLDNVML--DSEGHIKIADFGM-CK--ENIWDGVTTKXFCGTPDYIAPEIIAY 195
Query: 298 IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVE 337
PY ++D W+ G +L EM G+ F G +E + I+E
Sbjct: 196 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII--KNKKPFLNQAQIEVKLLEIMNKAD 176
D +E S +G G+ G V K +A K+I + K NQ ++ L+++++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI---IRELQVLHEC- 61
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N+ YIV F + + E + D + R + + K S + L
Sbjct: 62 --NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLT 118
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYIQSRFYRSPEVL 295
+L I+H D+KP NIL+ + R IK+ DFG S QL + ++ +R Y SPE L
Sbjct: 119 YLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 296 LGIPYDLAIDMWSLGCILVEMHTG 319
G Y + D+WS+G LVEM G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII--KNKKPFLNQAQIEVKLLEIMNKAD 176
D +E S +G G+ G V K +A K+I + K NQ ++ L+++++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI---IRELQVLHEC- 61
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
N+ YIV F + + E + D + R + + K S + L
Sbjct: 62 --NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLT 118
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYIQSRFYRSPEVL 295
+L I+H D+KP NIL+ + R IK+ DFG S QL + ++ +R Y SPE L
Sbjct: 119 YLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 296 LGIPYDLAIDMWSLGCILVEMHTG 319
G Y + D+WS+G LVEM G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 116/242 (47%), Gaps = 24/242 (9%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG+GS G V A + VA+K++ +K Q + E+ E++ D + + +V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRDYQH-FNVVEM 107
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ ++ L ++ E L L D++ + + + AL +L +
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA---TVCEAVLQALAYLHAQ--GV 162
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRFYRSPEVLLGIPYDL 302
IH D+K ++ILL R +K+ DFG Q+ + + + + + ++ +PEV+ Y
Sbjct: 163 IHRDIKSDSILLTLDGR--VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYAT 220
Query: 303 AIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKT----RKYFD 358
+D+WSLG +++EM GEP + + V M ++ + PPK L +HK R + +
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD--SPPPK--LKNSHKVSPVLRDFLE 276
Query: 359 KM 360
+M
Sbjct: 277 RM 278
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIM 172
+ Y + IGKG+F +V A + VAIKII K LN + EV++++I+
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIID--KTQLNPTSLQKLFREVRIMKIL 71
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQL 231
N ++ + ++ ++ L L+ E S ++D L + R KF +Q+
Sbjct: 72 NHPNIVKLFEVIETEKT------LYLIMEYASGGEVFDYLV-AHGRMKEKEARSKF-RQI 123
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--LGQRIYQYIQSRFY 289
+A+ + + I+H DLK EN+LL IKI DFG S + +G ++ + + Y
Sbjct: 124 VSAVQYCH--QKRIVHRDLKAENLLL--DADMNIKIADFGFSNEFTVGGKLDAFCGAPPY 179
Query: 290 RSPEVLLGIPYDL-AIDMWSLGCILVEMHTGEPLFSGSN 327
+PE+ G YD +D+WSLG IL + +G F G N
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 33/247 (13%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI----EVKLL 169
G L + I+ IG+G F +V +A L + VA+K ++ +A+ E+ LL
Sbjct: 27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL 86
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF-----RGVSLNLT 224
+ +N +V Y F+ N L +V EL DL R R +
Sbjct: 87 KQLNHPNVIKYY------ASFIEDNELNIVLELADAG--DLSRMIKHFKKQKRLIPERTV 138
Query: 225 RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI---Y 281
K+ QLC+AL + + ++H D+KP N+ + +K+ D G + +
Sbjct: 139 WKYFVQLCSALEHMHS--RRVMHRDIKPANVFIT--ATGVVKLGDLGLGRFFSSKTTAAH 194
Query: 282 QYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMN-----KIV 336
+ + +Y SPE + Y+ D+WSLGC+L EM + F G D+MN K +
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG----DKMNLYSLCKKI 250
Query: 337 EVLGLPP 343
E PP
Sbjct: 251 EQCDYPP 257
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY-YIV 184
L+GKG+FG+V+ + + A+KI++ + + A+ EV ++ N + ++
Sbjct: 15 LLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTRHPFLT 71
Query: 185 RLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
LK F + LC V E + + L R F + R + ++ +AL +L +
Sbjct: 72 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSR- 127
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRSPEVLLGIP 299
++++ D+K EN++L K IKI DFG G + + + Y +PEVL
Sbjct: 128 -DVVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 184
Query: 300 YDLAIDMWSLGCILVEMHTGE-PLFSGSNE 328
Y A+D W LG ++ EM G P ++ +E
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 214
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 28/244 (11%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG+GS G V A VA+K + +K Q + E+ E++ D + +V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHEN-VVEM 213
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL-FLSTPEL- 243
++ + L +V E L L D++ +T + + +C A+L LS
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTHTR-------MNEEQIAAVCLAVLQALSVLHAQ 266
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRFYRSPEVLLGIPY 300
+IH D+K ++ILL + R +K+ DFG Q+ + + + + + ++ +PE++ +PY
Sbjct: 267 GVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 324
Query: 301 DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKT----RKY 356
+D+WSLG +++EM GEP + + M I + LPP+ L HK + +
Sbjct: 325 GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPR--LKNLHKVSPSLKGF 380
Query: 357 FDKM 360
D++
Sbjct: 381 LDRL 384
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY-YIV 184
L+GKG+FG+V+ + + A+KI++ + + A+ EV ++ N + ++
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 185 RLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
LK F + LC V E + + L R F + R + ++ +AL +L +
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSR- 124
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRSPEVLLGIP 299
++++ D+K EN++L K IKI DFG G + + + Y +PEVL
Sbjct: 125 -DVVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 300 YDLAIDMWSLGCILVEMHTGE-PLFSGSNE 328
Y A+D W LG ++ EM G P ++ +E
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 20/231 (8%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D YE+ +G G F V K A K IK ++ L+ ++ V EI + ++
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRR--LSSSRRGVSREEIEREVNIL 69
Query: 179 NTYY---IVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
I+ L F + + L+ EL+S L+D L ++ + +F +Q+
Sbjct: 70 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDG 127
Query: 235 LLFLSTPELNIIHCDLKPENILLC-----NPKRSAIKIVDFGSS--CQLGQRIYQYIQSR 287
+ +L + I H DLKPENI+L NP+ IK++DFG + + G +
Sbjct: 128 VHYLHSK--RIAHFDLKPENIMLLDKNVPNPR---IKLIDFGIAHKIEAGNEFKNIFGTP 182
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + I V
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 233
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-----EVKLLEIM 172
+ Y + IGKG+F +V A + VA+KII K LN + + EV++ +++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIID--KTQLNSSSLQKLFREVRIXKVL 70
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQL 231
N ++ + ++ ++ L LV E S ++D L + R KF +Q+
Sbjct: 71 NHPNIVKLFEVIETEKT------LYLVXEYASGGEVFDYLV-AHGRXKEKEARAKF-RQI 122
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ--LGQRIYQYIQSRFY 289
+A+ + + I+H DLK EN+LL IKI DFG S + G ++ + + Y
Sbjct: 123 VSAVQYCH--QKFIVHRDLKAENLLL--DADXNIKIADFGFSNEFTFGNKLDAFCGAPPY 178
Query: 290 RSPEVLLGIPYDL-AIDMWSLGCILVEMHTGEPLFSGSN 327
+PE+ G YD +D+WSLG IL + +G F G N
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY-YIV 184
L+GKG+FG+V+ + + A+KI++ + + A+ EV ++ N + ++
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTRHPFLT 73
Query: 185 RLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
LK F + LC V E + + L R F + R + ++ +AL +L +
Sbjct: 74 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSR- 129
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRSPEVLLGIP 299
++++ D+K EN++L K IKI DFG G + + + Y +PEVL
Sbjct: 130 -DVVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 186
Query: 300 YDLAIDMWSLGCILVEMHTGE-PLFSGSNE 328
Y A+D W LG ++ EM G P ++ +E
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY-YIV 184
L+GKG+FG+V+ + + A+KI++ + + A+ EV ++ N + ++
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 185 RLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
LK F + LC V E + + L R F + R + ++ +AL +L +
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSR- 124
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRSPEVLLGIP 299
++++ D+K EN++L K IKI DFG G + + + Y +PEVL
Sbjct: 125 -DVVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 300 YDLAIDMWSLGCILVEMHTGE-PLFSGSNE 328
Y A+D W LG ++ EM G P ++ +E
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY-YIV 184
L+GKG+FG+V+ + + A+KI++ + + A+ EV ++ N + ++
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 185 RLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
LK F + LC V E + + L R F + R + ++ +AL +L +
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSR- 124
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRSPEVLLGIP 299
++++ D+K EN++L K IKI DFG G + + + Y +PEVL
Sbjct: 125 -DVVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 300 YDLAIDMWSLGCILVEMHTGE-PLFSGSNE 328
Y A+D W LG ++ EM G P ++ +E
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQA-QIEVKLLEIMNKADVNNTYYIV 184
++GKG++G V DL Q +AIK I + +Q E+ L + + + IV
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN------IV 82
Query: 185 RLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLN--LTRKFSQQLCTALLFLSTPE 242
+ F + + E + L + + + N +++Q+ L +L +
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 142
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR---IYQYIQSRFYRSPEVLLGIP 299
I+H D+K +N+L+ N +KI DFG+S +L + + Y +PE++ P
Sbjct: 143 --IVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 300 --YDLAIDMWSLGCILVEMHTGEPLF 323
Y A D+WSLGC ++EM TG+P F
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY-YIV 184
L+GKG+FG+V+ + + A+KI++ + + A+ EV ++ N + ++
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 185 RLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
LK F + LC V E + + L R F + R + ++ +AL +L +
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSR- 124
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRSPEVLLGIP 299
++++ D+K EN++L K IKI DFG G + + + Y +PEVL
Sbjct: 125 -DVVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 300 YDLAIDMWSLGCILVEMHTGE-PLFSGSNE 328
Y A+D W LG ++ EM G P ++ +E
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 126 LIGKGSFGQV----VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
++G+G FG+V +KA C K K+ A +E K+L ++ +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH------SR 245
Query: 182 YIVRLKRHFMWRNHLCLVFELLS-----YNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+IV L F + LCLV +++ Y++Y++ + + G ++ Q+ + L
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQ-RIYQYIQSRFYRSPE 293
L + NII+ DLKPEN+LL + ++I D G + +L GQ + Y + + +PE
Sbjct: 304 HLH--QRNIIYRDLKPENVLLDDDGN--VRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNE 328
+LLG YD ++D ++LG L EM F E
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 20/231 (8%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D YE+ +G G F V K A K IK ++ L+ ++ V EI + ++
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRR--LSSSRRGVSREEIEREVNIL 62
Query: 179 NTYY---IVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
I+ L F + + L+ EL+S L+D L ++ + +F +Q+
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDG 120
Query: 235 LLFLSTPELNIIHCDLKPENILLC-----NPKRSAIKIVDFGSS--CQLGQRIYQYIQSR 287
+ +L + I H DLKPENI+L NP+ IK++DFG + + G +
Sbjct: 121 VHYLHSK--RIAHFDLKPENIMLLDKNVPNPR---IKLIDFGIAHKIEAGNEFKNIFGTP 175
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + I V
Sbjct: 176 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 226
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 414 KDLIFRMLDYDPKTRITPYYALQHNFFK 441
KD I R+L DPK R+T +L+H++ K
Sbjct: 243 KDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVKLLEI 171
D Y+ +G G F V K + A K IK ++ ++ + EV +L+
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V + L + + + L+ EL++ L+D L ++ +F +Q
Sbjct: 70 IQHPNV------ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQ 121
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQS 286
+ + +L + L I H DLKPENI+L N + IKI+DFG + ++ G +
Sbjct: 122 ILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 179
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + + V
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 106/232 (45%), Gaps = 26/232 (11%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG+G++G V K +A+K I++ Q Q+ + L +M +D YIV+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP---YIVQF 86
Query: 187 KRHFMWRNHLCLVFELLSYN-------LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLS 239
+ EL+S + +Y +L + + + K + AL L
Sbjct: 87 YGALFREGDCWICMELMSTSFDKFYKYVYSVLDDV----IPEEILGKITLATVKALNHLK 142
Query: 240 TPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQS--RFYRSPEVLLG 297
L IIH D+KP NILL + IK+ DFG S QL I + + R Y +PE +
Sbjct: 143 E-NLKIIHRDIKPSNILL--DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDP 199
Query: 298 IP----YDLAIDMWSLGCILVEMHTGEPLFSGSNEV-DQMNKIVEVLGLPPK 344
YD+ D+WSLG L E+ TG + N V DQ+ ++V+ G PP+
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDPPQ 249
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 126 LIGKGSFGQV----VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
++G+G FG+V +KA C K K+ A +E K+L ++ +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH------SR 245
Query: 182 YIVRLKRHFMWRNHLCLVFELLS-----YNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+IV L F + LCLV +++ Y++Y++ + + G ++ Q+ + L
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQ-RIYQYIQSRFYRSPE 293
L + NII+ DLKPEN+LL + ++I D G + +L GQ + Y + + +PE
Sbjct: 304 HLH--QRNIIYRDLKPENVLLDDDGN--VRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNE 328
+LLG YD ++D ++LG L EM F E
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY-YIV 184
L+GKG+FG+V+ + + A+KI++ + + A+ EV ++ N + ++
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 185 RLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
LK F + LC V E + + L R F + R + ++ +AL +L +
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSR- 124
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQYIQSRFYRSPEVLLGIP 299
++++ D+K EN++L K IKI DFG G + + + Y +PEVL
Sbjct: 125 -DVVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 300 YDLAIDMWSLGCILVEMHTGE-PLFSGSNE 328
Y A+D W LG ++ EM G P ++ +E
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 126 LIGKGSFGQV----VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
++G+G FG+V +KA C K K+ A +E K+L ++ +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH------SR 245
Query: 182 YIVRLKRHFMWRNHLCLVFELLS-----YNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+IV L F + LCLV +++ Y++Y++ + + G ++ Q+ + L
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQ-RIYQYIQSRFYRSPE 293
L + NII+ DLKPEN+LL + ++I D G + +L GQ + Y + + +PE
Sbjct: 304 HLH--QRNIIYRDLKPENVLLDDDGN--VRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNE 328
+LLG YD ++D ++LG L EM F E
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVKLLEI 171
D Y+ +G G F V K + A K IK ++ ++ + EV +L+
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V + L + + + L+ EL++ L+D L ++ +F +Q
Sbjct: 70 IQHPNV------ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQ 121
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQS 286
+ + +L + L I H DLKPENI+L N + IKI+DFG + ++ G +
Sbjct: 122 ILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 179
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + + V
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 127/277 (45%), Gaps = 31/277 (11%)
Query: 116 KFLDRYEIDS-LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNK 174
KF D Y++ S L+G+G++ +V A L+ A+KII+ K+ +++++ + +E + +
Sbjct: 9 KFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIE-KQAGHSRSRV-FREVETLYQ 66
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLC 232
N I+ L F LVFE L L + + +F + + + +
Sbjct: 67 CQGNKN--ILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHF---NEREASRVVRDVA 121
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKR-SAIKIVDF--GSSCQLGQ--------RIY 281
AL FL T I H DLKPENIL +P++ S +KI DF GS +L +
Sbjct: 122 AALDFLHTK--GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 282 QYIQSRFYRSPEVL-----LGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV 336
S Y +PEV+ YD D+WSLG +L M +G P F G D
Sbjct: 180 TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRG 239
Query: 337 EVLGLPPKHLLDGAHKTRKYF-DKMPDGSYILKKPKD 372
EV + L + + + F DK D ++I + KD
Sbjct: 240 EVCRVCQNKLFESIQEGKYEFPDK--DWAHISSEAKD 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVKLLEI 171
D Y+ +G G F V K + A K IK ++ ++ + EV +L+
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V + L + + + L+ EL++ L+D L ++ +F +Q
Sbjct: 71 IQHPNV------ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQ 122
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQS 286
+ + +L + L I H DLKPENI+L N + IKI+DFG + ++ G +
Sbjct: 123 ILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVKLLEI 171
D Y+ +G G F V K + A K IK ++ ++ + EV +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V + L + + + L+ EL++ L+D L ++ +F +Q
Sbjct: 71 IQHPNV------ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQ 122
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQS 286
+ + +L + L I H DLKPENI+L N + IKI+DFG + ++ G +
Sbjct: 123 ILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 95/222 (42%), Gaps = 14/222 (6%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
DRYE+ IG G+FG D + VA+K I+ + + EI+N +
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK-----REIINHRSLR 73
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
+ IVR K + HL +V E S L++ R N S + R F QQL + + +
Sbjct: 74 HP-NIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 238 LSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQYIQSRFYRSPEVL 295
+ + H DLK EN LL +KI FG S L + + + Y +PEVL
Sbjct: 131 CHA--MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 296 LGIPYDLAI-DMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV 336
L YD + D+WS G L M G F E K +
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVKLLEI 171
D Y+ +G G F V K + A K IK ++ ++ + EV +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V + L + + + L+ EL++ L+D L ++ +F +Q
Sbjct: 71 IQHPNV------ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQ 122
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQS 286
+ + +L + L I H DLKPENI+L N + IKI+DFG + ++ G +
Sbjct: 123 ILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLE---- 170
+K D Y+I +G G F V K + A K IK ++ ++ + + +E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQ 229
I+ + +N ++ L + R + L+ EL+S L+D L +S F +
Sbjct: 68 ILRQVLHHN---VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIK 122
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQ 285
Q+ + +L T + I H DLKPENI+L N IK++DFG + ++ G
Sbjct: 123 QILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 286 SRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ + +PE++ P L DMWS+G I + +G F G + + + I V
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E + +L+D + T + L R
Sbjct: 64 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERMEPVQDLFDFI--TERGALQEELAR 117
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 118 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 174
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 175 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 28/244 (11%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG+GS G V A VA+K + +K Q + E+ E++ D + +V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHEN-VVEM 91
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL-FLSTPEL- 243
++ + L +V E L L D++ +T + + +C A+L LS
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTHTR-------MNEEQIAAVCLAVLQALSVLHAQ 144
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRFYRSPEVLLGIPY 300
+IH D+K ++ILL + R +K+ DFG Q+ + + + + + ++ +PE++ +PY
Sbjct: 145 GVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 202
Query: 301 DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKT----RKY 356
+D+WSLG +++EM GEP + + M I + LPP+ L HK + +
Sbjct: 203 GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPR--LKNLHKVSPSLKGF 258
Query: 357 FDKM 360
D++
Sbjct: 259 LDRL 262
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 95/222 (42%), Gaps = 14/222 (6%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
DRYE+ IG G+FG D + VA+K I+ + + EI+N +
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK-----REIINHRSLR 73
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
+ IVR K + HL +V E S L++ R N S + R F QQL + + +
Sbjct: 74 HP-NIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 238 LSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQYIQSRFYRSPEVL 295
+ + H DLK EN LL +KI FG S L + + + Y +PEVL
Sbjct: 131 CHA--MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVL 188
Query: 296 LGIPYDLAI-DMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV 336
L YD + D+WS G L M G F E K +
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVKLLEI 171
D Y+ +G G F V K + A K IK ++ ++ + EV +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V + L + + + L+ EL++ L+D L ++ +F +Q
Sbjct: 71 IQHPNV------ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQ 122
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQS 286
+ + +L + L I H DLKPENI+L N + IKI+DFG + ++ G +
Sbjct: 123 ILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQA-QIEVKLLEIMNKADVNNTYYIV 184
++GKG++G V DL Q +AIK I + +Q E+ L + + + IV
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN------IV 68
Query: 185 RLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLN--LTRKFSQQLCTALLFLSTPE 242
+ F + + E + L + + + N +++Q+ L +L +
Sbjct: 69 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 128
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR---IYQYIQSRFYRSPEVLLGIP 299
I+H D+K +N+L+ N +KI DFG+S +L + + Y +PE++ P
Sbjct: 129 --IVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 185
Query: 300 --YDLAIDMWSLGCILVEMHTGEPLF 323
Y A D+WSLGC ++EM TG+P F
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVKLLEI 171
D Y+ +G G F V K + A K IK ++ ++ + EV +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V + L + + + L+ EL++ L+D L ++ +F +Q
Sbjct: 71 IQHPNV------ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQ 122
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQS 286
+ + +L + L I H DLKPENI+L N + IKI+DFG + ++ G +
Sbjct: 123 ILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 28/244 (11%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG+GS G V A VA+K + +K Q + E+ E++ D + +V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHEN-VVEM 93
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL-FLSTPEL- 243
++ + L +V E L L D++ +T + + +C A+L LS
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDIVTHTR-------MNEEQIAAVCLAVLQALSVLHAQ 146
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRFYRSPEVLLGIPY 300
+IH D+K ++ILL + R +K+ DFG Q+ + + + + + ++ +PE++ +PY
Sbjct: 147 GVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 204
Query: 301 DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKT----RKY 356
+D+WSLG +++EM GEP + + M I + LPP+ L HK + +
Sbjct: 205 GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPR--LKNLHKVSPSLKGF 260
Query: 357 FDKM 360
D++
Sbjct: 261 LDRL 264
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVKLLEI 171
D Y+ +G G F V K + A K IK ++ ++ + EV +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V + L + + + L+ EL++ L+D L ++ +F +Q
Sbjct: 71 IQHPNV------ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQ 122
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQS 286
+ + +L + L I H DLKPENI+L N + IKI+DFG + ++ G +
Sbjct: 123 ILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 25/209 (11%)
Query: 126 LIGKGSFGQV----VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
++GKG FG+V V+A C K K+ A E ++LE +N +
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN------SR 244
Query: 182 YIVRLKRHFMWRNHLCLVFEL-----LSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
++V L + ++ LCLV L L +++Y + + G ++ ++C L
Sbjct: 245 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA----GFPEARAVFYAAEICCGLE 300
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPEV 294
L I++ DLKPENILL + I+I D G + + GQ I + + Y +PEV
Sbjct: 301 DLHRE--RIVYRDLKPENILLDD--HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV 356
Query: 295 LLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+ Y + D W+LGC+L EM G+ F
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVKLLEI 171
D Y+ +G G F V K + A K IK ++ ++ + EV +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V + L + + + L+ EL++ L+D L ++ +F +Q
Sbjct: 71 IQHPNV------ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQ 122
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQS 286
+ + +L + L I H DLKPENI+L N + IKI+DFG + ++ G +
Sbjct: 123 ILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVKLLEI 171
D Y+ +G G F V K + A K IK ++ ++ + EV +L+
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V + L + + + L+ EL++ L+D L ++ +F +Q
Sbjct: 71 IQHPNV------ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQ 122
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQS 286
+ + +L + L I H DLKPENI+L N + IKI+DFG + ++ G +
Sbjct: 123 ILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNK-KPFLNQAQIEVKLLEIM 172
GE D +E S +G G+ G V K +A K+I + KP + QI ++ L+++
Sbjct: 11 GELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN-QI-IRELQVL 68
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
++ N+ YIV F + + E + D + R + + K S +
Sbjct: 69 HEC---NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR-IPEEILGKVSIAVL 124
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYIQSRFYRS 291
L +L I+H D+KP NIL+ + R IK+ DFG S QL + ++ +R Y +
Sbjct: 125 RGLAYLREKH-QIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMA 181
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHTG 319
PE L G Y + D+WS+G LVE+ G
Sbjct: 182 PERLQGTHYSVQSDIWSMGLSLVELAVG 209
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 20/231 (8%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D YE+ +G G F V K A K IK ++ L ++ V EI + ++
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRR--LXSSRRGVSREEIEREVNIL 83
Query: 179 NTYY---IVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
I+ L F + + L+ EL+S L+D L ++ + +F +Q+
Sbjct: 84 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDG 141
Query: 235 LLFLSTPELNIIHCDLKPENILLC-----NPKRSAIKIVDFGSS--CQLGQRIYQYIQSR 287
+ +L + I H DLKPENI+L NP+ IK++DFG + + G +
Sbjct: 142 VHYLHSK--RIAHFDLKPENIMLLDKNVPNPR---IKLIDFGIAHKIEAGNEFKNIFGTP 196
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + I V
Sbjct: 197 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 247
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG+G+ G V A D+ VAI+ + ++ Q + E+ + EI+ + N IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINEILVMRE-NKNPNIVNY 82
Query: 187 KRHFMWRNHLCLVFELLSY-NLYDLLRNTNF-RGVSLNLTRKFSQQLCTALLFLSTPELN 244
++ + L +V E L+ +L D++ T G + R+ Q AL FL + +
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----ALEFLHSNQ-- 136
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQYIQSRFYRSPEVLLGIPYD 301
+IH D+K +NILL ++K+ DFG Q+ + + + + ++ +PEV+ Y
Sbjct: 137 VIHRDIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYG 194
Query: 302 LAIDMWSLGCILVEMHTGEPLFSGSN 327
+D+WSLG + +EM GEP + N
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 28/244 (11%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG+GS G V A VA+K + +K Q + E+ E++ D + +V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHEN-VVEM 86
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL-FLSTPEL- 243
++ + L +V E L L D++ +T + + +C A+L LS
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDIVTHTR-------MNEEQIAAVCLAVLQALSVLHAQ 139
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRFYRSPEVLLGIPY 300
+IH D+K ++ILL + R +K+ DFG Q+ + + + + + ++ +PE++ +PY
Sbjct: 140 GVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 197
Query: 301 DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKT----RKY 356
+D+WSLG +++EM GEP + + M I + LPP+ L HK + +
Sbjct: 198 GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPR--LKNLHKVSPSLKGF 253
Query: 357 FDKM 360
D++
Sbjct: 254 LDRL 257
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 126 LIGKGSFGQV----VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
++G+G FG+V +KA C K K+ A +E K+L ++ +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH------SR 245
Query: 182 YIVRLKRHFMWRNHLCLVFELLS-----YNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+IV L F + LCLV +++ Y++Y++ + + G ++ Q+ + L
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQ-RIYQYIQSRFYRSPE 293
L + NII+ DLKPEN+LL + ++I D G + +L GQ + Y + + +PE
Sbjct: 304 HLH--QRNIIYRDLKPENVLLDDDGN--VRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNE 328
+LLG YD ++D ++LG L EM F E
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVKLLEI 171
D Y+ +G G F V K + A K IK ++ ++ + EV +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V + L + + + L+ EL++ L+D L ++ +F +Q
Sbjct: 71 IQHPNV------ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQ 122
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQS 286
+ + +L + L I H DLKPENI+L N + IKI+DFG + ++ G +
Sbjct: 123 ILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D +E++S +G+G+ V + Q A+K++K +++ + ++ ++ + N
Sbjct: 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT---VDKKIVRTEIGVLLRLSHPN 109
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
I++LK F + LV EL++ L+D + + S +Q+ A+ +
Sbjct: 110 ----IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQILEAVAY 163
Query: 238 LSTPELNIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQRIYQ--YIQSRFYRSPEV 294
L E I+H DLKPEN+L P A +KI DFG S + ++ + Y +PE+
Sbjct: 164 LH--ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEI 221
Query: 295 LLGIPYDLAIDMWSLGCILVEMHTG-EPLF 323
L G Y +DMWS+G I + G EP +
Sbjct: 222 LRGCAYGPEVDMWSVGIITYILLCGFEPFY 251
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 411 LKFKDLIFRMLDYDPKTRITPYYALQHNFFKRTA 444
L KDL+ +++ DPK R+T + ALQH + A
Sbjct: 280 LNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA 313
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 28/244 (11%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG+GS G V A VA+K + +K Q + E+ E++ D + +V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHEN-VVEM 82
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL-FLSTPEL- 243
++ + L +V E L L D++ +T + + +C A+L LS
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTHTR-------MNEEQIAAVCLAVLQALSVLHAQ 135
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQSRFYRSPEVLLGIPY 300
+IH D+K ++ILL + R +K+ DFG Q+ + + + + + ++ +PE++ +PY
Sbjct: 136 GVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 193
Query: 301 DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAHKT----RKY 356
+D+WSLG +++EM GEP + + M I + LPP+ L HK + +
Sbjct: 194 GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPR--LKNLHKVSPSLKGF 249
Query: 357 FDKM 360
D++
Sbjct: 250 LDRL 253
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVKLLEI 171
D Y+ +G G F V K + A K IK ++ ++ + EV +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V + L + + + L+ EL++ L+D L ++ +F +Q
Sbjct: 71 IQHPNV------ITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQ 122
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQS 286
+ + +L + L I H DLKPENI+L N + IKI+DFG + ++ G +
Sbjct: 123 ILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + + V
Sbjct: 181 PAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 25/209 (11%)
Query: 126 LIGKGSFGQV----VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
++GKG FG+V V+A C K K+ A E ++LE +N +
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN------SR 244
Query: 182 YIVRLKRHFMWRNHLCLVFEL-----LSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
++V L + ++ LCLV L L +++Y + + G ++ ++C L
Sbjct: 245 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA----GFPEARAVFYAAEICCGLE 300
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPEV 294
L I++ DLKPENILL + I+I D G + + GQ I + + Y +PEV
Sbjct: 301 DLHRE--RIVYRDLKPENILLDD--HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV 356
Query: 295 LLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+ Y + D W+LGC+L EM G+ F
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVKLLEI 171
D Y+ +G G F V K + A K IK ++ ++ + EV +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V + L + + + L+ EL++ L+D L ++ +F +Q
Sbjct: 71 IQHPNV------ITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEFLKQ 122
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQS 286
+ + +L + L I H DLKPENI+L N + IKI+DFG + ++ G +
Sbjct: 123 ILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLE---- 170
+K D Y+I +G G F V K + A K IK ++ ++ + + +E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQ 229
I+ + +N ++ L + R + L+ EL+S L+D L +S F +
Sbjct: 68 ILRQVLHHN---VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIK 122
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQ 285
Q+ + +L T + I H DLKPENI+L N IK++DFG + ++ G
Sbjct: 123 QILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 286 SRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ + +PE++ P L DMWS+G I + +G F G + + + I V
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPF-LNQAQIEVKLLEIMNKAD 176
D +EI IGKGSFG+V + + A+K + +K N+ + K L+IM +
Sbjct: 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE 73
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
++V L F + +V +LL Y L +N +F+ ++ L F +L A
Sbjct: 74 ---HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL---FICELVMA 127
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ--RIYQYIQSRFYRSP 292
L +L IIH D+KP+NILL + + I DF + L + +I ++ Y +P
Sbjct: 128 LDYLQNQR--IIHRDMKPDNILL--DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAP 183
Query: 293 EVLL---GIPYDLAIDMWSLGCILVEMHTG 319
E+ G Y A+D WSLG E+ G
Sbjct: 184 EMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII-KNKKPFLNQAQIEVKLLEIMNK 174
+F D YE+ IG GS+ + A+KII K+K+ + +I ++ + N
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPN- 77
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
I+ LK + ++ +V EL+ L D + F FS++ +
Sbjct: 78 --------IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF----------FSEREAS 119
Query: 234 ALLFLSTPEL------NIIHCDLKPENILLC----NPKRSAIKIVDFGSSCQL----GQR 279
A+LF T + ++H DLKP NIL NP+ +I+I DFG + QL G
Sbjct: 120 AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPE--SIRICDFGFAKQLRAENGLL 177
Query: 280 IYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTG-EPLFSGSNEV 329
+ + F +PEVL YD A D+WSLG +L M TG P +G ++
Sbjct: 178 MTPCYTANFV-APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLE---- 170
+K D Y+I +G G F V K + A K IK ++ ++ + + +E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQ 229
I+ + +N ++ L + R + L+ EL+S L+D L +S F +
Sbjct: 68 ILRQVLHHN---VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIK 122
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQ 285
Q+ + +L T + I H DLKPENI+L N IK++DFG + ++ G
Sbjct: 123 QILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 286 SRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ + +PE++ P L DMWS+G I + +G F G + + + I V
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVKLLEI 171
D Y+ +G G F V K + A K IK ++ ++ + EV +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V + L + + + L+ EL++ L+D L ++ +F +Q
Sbjct: 71 IQHPNV------ITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQ 122
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQS 286
+ + +L + L I H DLKPENI+L N + IKI+DFG + ++ G +
Sbjct: 123 ILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ +PE++ P L DMWS+G I + +G F G + + + + V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 80 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 133
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 134 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 190
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 79 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 132
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 133 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 189
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 80 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 133
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 134 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 190
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLE---- 170
+K D Y+I +G G F V K + A K IK ++ ++ + + +E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQ 229
I+ + +N ++ L + R + L+ EL+S L+D L +S F +
Sbjct: 68 ILRQVLHHN---VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIK 122
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQ 285
Q+ + +L T + I H DLKPENI+L N IK++DFG + ++ G
Sbjct: 123 QILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 286 SRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ + +PE++ P L DMWS+G I + +G F G + + + I V
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG+G+ G V A D+ VAI+ + ++ Q + E+ + EI+ + N IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINEILVMRE-NKNPNIVNY 82
Query: 187 KRHFMWRNHLCLVFELLSY-NLYDLLRNTNF-RGVSLNLTRKFSQQLCTALLFLSTPELN 244
++ + L +V E L+ +L D++ T G + R+ Q AL FL + +
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----ALEFLHSNQ-- 136
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQYIQSRFYRSPEVLLGIPYD 301
+IH D+K +NILL ++K+ DFG Q+ + + + ++ +PEV+ Y
Sbjct: 137 VIHRDIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 194
Query: 302 LAIDMWSLGCILVEMHTGEPLFSGSN 327
+D+WSLG + +EM GEP + N
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 99 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 152
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 153 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 209
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 210 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 255
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 80 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 133
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 134 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 190
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 27/226 (11%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK--------------NKKPFLNQAQIEVKLLEIM 172
+G G++G+V+ + AIK+IK N + F + E+ LL+ +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+ ++ + + K++F EL ++ F +Q+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFE----QIINRHKFDECD---AANIMKQIL 156
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRS-AIKIVDFGSSCQLGQ--RIYQYIQSRFY 289
+ + +L NI+H D+KPENILL N IKIVDFG S + ++ + + +Y
Sbjct: 157 SGICYLHKH--NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYY 214
Query: 290 RSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
+PEVL Y+ D+WS G I+ + G P F G N+ D + K+
Sbjct: 215 IAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 79 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 132
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 133 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 189
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG+G+ G V A D+ VAI+ + ++ Q + E+ + EI+ + N IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINEILVMRE-NKNPNIVNY 82
Query: 187 KRHFMWRNHLCLVFELLSY-NLYDLLRNTNF-RGVSLNLTRKFSQQLCTALLFLSTPELN 244
++ + L +V E L+ +L D++ T G + R+ Q AL FL + +
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----ALEFLHSNQ-- 136
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQYIQSRFYRSPEVLLGIPYD 301
+IH D+K +NILL ++K+ DFG Q+ + + + ++ +PEV+ Y
Sbjct: 137 VIHRDIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYG 194
Query: 302 LAIDMWSLGCILVEMHTGEPLFSGSN 327
+D+WSLG + +EM GEP + N
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 65 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 118
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 119 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 175
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLE---- 170
+K D Y+I +G G F V K + A K IK ++ ++ + + +E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQ 229
I+ + +N ++ L + R + L+ EL+S L+D L +S F +
Sbjct: 68 ILRQVLHHN---VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIK 122
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQYIQ 285
Q+ + +L T + I H DLKPENI+L N IK++DFG + ++ G
Sbjct: 123 QILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 286 SRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ + +PE++ P L DMWS+G I + +G F G + + + I V
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG+G+ G V A D+ VAI+ + ++ Q + E+ + EI+ + N IV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINEILVMRE-NKNPNIVNY 83
Query: 187 KRHFMWRNHLCLVFELLSY-NLYDLLRNTNF-RGVSLNLTRKFSQQLCTALLFLSTPELN 244
++ + L +V E L+ +L D++ T G + R+ Q AL FL + +
Sbjct: 84 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----ALEFLHSNQ-- 137
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQYIQSRFYRSPEVLLGIPYD 301
+IH D+K +NILL ++K+ DFG Q+ + + + ++ +PEV+ Y
Sbjct: 138 VIHRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYG 195
Query: 302 LAIDMWSLGCILVEMHTGEPLFSGSN 327
+D+WSLG + +EM GEP + N
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNEN 221
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 52 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 111
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 112 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 165
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 166 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 222
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 223 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 268
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 110/216 (50%), Gaps = 20/216 (9%)
Query: 117 FLDRYEIDS-LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+D Y++ S ++G G G+V++ F+ Q A+K++++ +A+ EV+L
Sbjct: 13 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL-----HW 63
Query: 176 DVNNTYYIVRL----KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +IVR+ + + R L +V E L L+ +++ + + + +
Sbjct: 64 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 123
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQR--IYQYIQSR 287
+ A+ +L + +NI H D+KPEN+L + + +AI K+ DFG + + + + +
Sbjct: 124 IGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTP 181
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+Y +PEVL YD + DMWSLG I+ + G P F
Sbjct: 182 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 65 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 118
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 119 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 175
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 65 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 118
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 119 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 175
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 93 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 146
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 147 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 203
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 64 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 117
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 118 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 174
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 175 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 92 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 145
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 146 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 202
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 93 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 146
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 147 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 203
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 107 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 160
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 161 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 217
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 27 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 87 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 140
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 141 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 197
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 198 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 243
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 25/235 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI----EVKLLEIMN 173
++ + + +IG+G FG+V + A+K + K+ + Q + E +L +++
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
D +IV + F + L + +L+ N DL + + GV +F
Sbjct: 247 TGDCP---FIVCMSYAFHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMRFY----A 297
Query: 234 ALLFLSTPELN---IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI-YQYIQSRFY 289
A + L ++ +++ DLKP NILL + ++I D G +C ++ + + + Y
Sbjct: 298 AEIILGLEHMHNRFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTHGY 355
Query: 290 RSPEVLL-GIPYDLAIDMWSLGCILVEMHTGEPLF-----SGSNEVDQMNKIVEV 338
+PEVL G+ YD + D +SLGC+L ++ G F +E+D+M + V
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 410
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 93 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 146
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 147 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 203
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 92 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 145
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 146 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 202
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 25/235 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI----EVKLLEIMN 173
++ + + +IG+G FG+V + A+K + K+ + Q + E +L +++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
D +IV + F + L + +L+ N DL + + GV +F
Sbjct: 248 TGDCP---FIVCMSYAFHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMRFY----A 298
Query: 234 ALLFLSTPELN---IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI-YQYIQSRFY 289
A + L ++ +++ DLKP NILL + ++I D G +C ++ + + + Y
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTHGY 356
Query: 290 RSPEVLL-GIPYDLAIDMWSLGCILVEMHTGEPLF-----SGSNEVDQMNKIVEV 338
+PEVL G+ YD + D +SLGC+L ++ G F +E+D+M + V
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 92 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 145
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 146 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 202
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 93 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 146
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 147 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 203
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 11/234 (4%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y I +G+GSFG+V A + Q VA+K I + L ++ + +++ ++ +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFI--SRQLLKKSDMHMRVEREISYLKLLRH 68
Query: 181 YYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLST 240
+I++L + +V E L+D + + ++ + R+F QQ+ A+ +
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYAGGELFDYI--VEKKRMTEDEGRRFFQQIICAIEYCHR 126
Query: 241 PELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPEVLLGI 298
+ I+H DLKPEN+LL + +KI DFG S + G + S Y +PEV+ G
Sbjct: 127 HK--IVHRDLKPENLLLDD--NLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGK 182
Query: 299 PY-DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHLLDGAH 351
Y +D+WS G +L M G F + K+ + + P L GA
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQ 236
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 92 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 145
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 146 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 202
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 27/206 (13%)
Query: 122 EIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKN---KKPFLNQAQIEVKLLEIMNKADVN 178
E++ ++G+G+FG V KA + VAIK I++ +K F+ +E++ L +N ++
Sbjct: 12 EVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESESERKAFI----VELRQLSRVNHPNIV 65
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTN-----FRGVSLNLTRKFSQQLC 232
Y N +CLV E +LY++L +++ + SQ +
Sbjct: 66 KLYGACL--------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV- 116
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSP 292
A L P+ +IH DLKP N+LL + +KI DFG++C + + S + +P
Sbjct: 117 -AYLHSMQPK-ALIHRDLKPPNLLLVA-GGTVLKICDFGTACDIQTHMTNNKGSAAWMAP 173
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
EV G Y D++S G IL E+ T
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVIT 199
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 117 FLDRYEIDS-LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+D Y++ S ++G G G+V++ F+ Q A+K++++ +A+ EV+L
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL-----HW 65
Query: 176 DVNNTYYIVRL----KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +IVR+ + + R L +V E L L+ +++ + + + +
Sbjct: 66 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQR--IYQYIQSR 287
+ A+ +L + +NI H D+KPEN+L + + +AI K+ DFG + + + +
Sbjct: 126 IGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 183
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+Y +PEVL YD + DMWSLG I+ + G P F
Sbjct: 184 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 107 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 160
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 161 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 217
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 122 EIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKN---KKPFLNQAQIEVKLLEIMNKADVN 178
E++ ++G+G+FG V KA + VAIK I++ +K F+ +E++ L +N ++
Sbjct: 11 EVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESESERKAFI----VELRQLSRVNHPNIV 64
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTN---FRGVSLNLTRKFSQQLCTA 234
Y N +CLV E +LY++L + + ++ A
Sbjct: 65 KLYGACL--------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEV 294
L P+ +IH DLKP N+LL + +KI DFG++C + + S + +PEV
Sbjct: 117 YLHSMQPK-ALIHRDLKPPNLLLVA-GGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEV 174
Query: 295 LLGIPYDLAIDMWSLGCILVEMHT 318
G Y D++S G IL E+ T
Sbjct: 175 FEGSNYSEKCDVFSWGIILWEVIT 198
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 117 FLDRYEIDS-LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+D Y++ S ++G G G+V++ F+ Q A+K++++ +A+ EV+L
Sbjct: 65 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL-----HW 115
Query: 176 DVNNTYYIVRL----KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +IVR+ + + R L +V E L L+ +++ + + + +
Sbjct: 116 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 175
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQR--IYQYIQSR 287
+ A+ +L + +NI H D+KPEN+L + + +AI K+ DFG + + + +
Sbjct: 176 IGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 233
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+Y +PEVL YD + DMWSLG I+ + G P F
Sbjct: 234 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 25/235 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI----EVKLLEIMN 173
++ + + +IG+G FG+V + A+K + K+ + Q + E +L +++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
D +IV + F + L + +L+ N DL + + GV +F
Sbjct: 248 TGDCP---FIVCMSYAFHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMRFY----A 298
Query: 234 ALLFLSTPELN---IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI-YQYIQSRFY 289
A + L ++ +++ DLKP NILL + ++I D G +C ++ + + + Y
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTHGY 356
Query: 290 RSPEVLL-GIPYDLAIDMWSLGCILVEMHTGEPLF-----SGSNEVDQMNKIVEV 338
+PEVL G+ YD + D +SLGC+L ++ G F +E+D+M + V
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 25/235 (10%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI----EVKLLEIMN 173
++ + + +IG+G FG+V + A+K + K+ + Q + E +L +++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
D +IV + F + L + +L+ N DL + + GV +F
Sbjct: 248 TGDCP---FIVCMSYAFHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMRFY----A 298
Query: 234 ALLFLSTPELN---IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI-YQYIQSRFY 289
A + L ++ +++ DLKP NILL + ++I D G +C ++ + + + Y
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTHGY 356
Query: 290 RSPEVLL-GIPYDLAIDMWSLGCILVEMHTGEPLF-----SGSNEVDQMNKIVEV 338
+PEVL G+ YD + D +SLGC+L ++ G F +E+D+M + V
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 117 FLDRYEIDS-LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+D Y++ S ++G G G+V++ F+ Q A+K++++ +A+ EV+L
Sbjct: 29 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL-----HW 79
Query: 176 DVNNTYYIVRL----KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +IVR+ + + R L +V E L L+ +++ + + + +
Sbjct: 80 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 139
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQR--IYQYIQSR 287
+ A+ +L + +NI H D+KPEN+L + + +AI K+ DFG + + + +
Sbjct: 140 IGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 197
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+Y +PEVL YD + DMWSLG I+ + G P F
Sbjct: 198 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G FG V + + VAIK ++ + P + +EV
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 63 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 116
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 117 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 173
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 174 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 117 FLDRYEIDS-LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+D Y++ S ++G G G+V++ F+ Q A+K++++ +A+ EV+L
Sbjct: 21 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL-----HW 71
Query: 176 DVNNTYYIVRL----KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +IVR+ + + R L +V E L L+ +++ + + + +
Sbjct: 72 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 131
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQR--IYQYIQSR 287
+ A+ +L + +NI H D+KPEN+L + + +AI K+ DFG + + + +
Sbjct: 132 IGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 189
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+Y +PEVL YD + DMWSLG I+ + G P F
Sbjct: 190 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 117 FLDRYEIDS-LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+D Y++ S ++G G G+V++ F+ Q A+K++++ +A+ EV+L
Sbjct: 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL-----HW 109
Query: 176 DVNNTYYIVRL----KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +IVR+ + + R L +V E L L+ +++ + + + +
Sbjct: 110 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 169
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQR--IYQYIQSR 287
+ A+ +L + +NI H D+KPEN+L + + +AI K+ DFG + + + +
Sbjct: 170 IGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 227
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+Y +PEVL YD + DMWSLG I+ + G P F
Sbjct: 228 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVKLLEIM 172
+Y++ L+G G FG V + + VAIK ++ + P + +EV LL+ +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ ++RL F + L+ E +L+D + T + L R F Q
Sbjct: 65 SSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQ 118
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYIQSRFY 289
+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y + +R Y
Sbjct: 119 VLEAVRHCHN--XGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 175
Query: 290 RSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
PE + Y + +WSLG +L +M G+ F E+
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 117 FLDRYEIDS-LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+D Y++ S ++G G G+V++ F+ Q A+K++++ +A+ EV+L
Sbjct: 19 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL-----HW 69
Query: 176 DVNNTYYIVRL----KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +IVR+ + + R L +V E L L+ +++ + + + +
Sbjct: 70 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 129
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQR--IYQYIQSR 287
+ A+ +L + +NI H D+KPEN+L + + +AI K+ DFG + + + +
Sbjct: 130 IGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 187
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+Y +PEVL YD + DMWSLG I+ + G P F
Sbjct: 188 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
++ +E +++G+G+FGQVVKA + + + AIK I++ + L+ EV LL +N
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQ 62
Query: 176 DVNNTYYIVRLKRHFM-------WRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKF 227
V Y +R+F+ ++ L + E + LYDL+ + N R F
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 228 SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL----------- 276
+Q+ AL ++ + IIH +LKP NI + + +KI DFG + +
Sbjct: 123 -RQILEALSYIHSQ--GIIHRNLKPXNIFIDESRN--VKIGDFGLAKNVHRSLDILKLDS 177
Query: 277 ------GQRIYQYIQSRFYRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+ I + Y + EVL G Y+ ID +SLG I E P +G V
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY--PFSTGXERV 235
Query: 330 DQMNKIVEV-LGLPP 343
+ + K+ V + PP
Sbjct: 236 NILKKLRSVSIEFPP 250
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 117 FLDRYEIDS-LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+D Y++ S ++G G G+V++ F+ Q A+K++++ +A+ EV+L
Sbjct: 13 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL-----HW 63
Query: 176 DVNNTYYIVRL----KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +IVR+ + + R L +V E L L+ +++ + + + +
Sbjct: 64 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 123
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQR--IYQYIQSR 287
+ A+ +L + +NI H D+KPEN+L + + +AI K+ DFG + + + +
Sbjct: 124 IGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 181
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+Y +PEVL YD + DMWSLG I+ + G P F
Sbjct: 182 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 117 FLDRYEIDS-LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+D Y++ S ++G G G+V++ F+ Q A+K++++ +A+ EV+L
Sbjct: 20 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL-----HW 70
Query: 176 DVNNTYYIVRL----KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +IVR+ + + R L +V E L L+ +++ + + + +
Sbjct: 71 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 130
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQR--IYQYIQSR 287
+ A+ +L + +NI H D+KPEN+L + + +AI K+ DFG + + + +
Sbjct: 131 IGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 188
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+Y +PEVL YD + DMWSLG I+ + G P F
Sbjct: 189 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 117 FLDRYEIDS-LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+D Y++ S ++G G G+V++ F+ Q A+K++++ +A+ EV+L
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL-----HW 65
Query: 176 DVNNTYYIVRL----KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +IVR+ + + R L +V E L L+ +++ + + + +
Sbjct: 66 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQR--IYQYIQSR 287
+ A+ +L + +NI H D+KPEN+L + + +AI K+ DFG + + + +
Sbjct: 126 IGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 183
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+Y +PEVL YD + DMWSLG I+ + G P F
Sbjct: 184 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 21/219 (9%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK-NKKPFLNQAQIEVKLLEIMNKADVNNT--YYI 183
IG GSFG V A D+ VAIK + + K + Q +K + + K NT Y
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLR--NTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
L+ H W LV E + DLL + V + + Q L +L +
Sbjct: 122 CYLREHTAW-----LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ---GLAYLHSH 173
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGI--- 298
N+IH D+K NILL P +K+ DFGS+ + ++ + ++ +PEV+L +
Sbjct: 174 --NMIHRDVKAGNILLSEP--GLVKLGDFGSASIMAP-ANXFVGTPYWMAPEVILAMDEG 228
Query: 299 PYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVE 337
YD +D+WSLG +E+ +P N + + I +
Sbjct: 229 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 267
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 117 FLDRYEIDS-LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+D Y++ S ++G G G+V++ F+ Q A+K++++ +A+ EV+L
Sbjct: 14 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL-----HW 64
Query: 176 DVNNTYYIVRL----KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +IVR+ + + R L +V E L L+ +++ + + + +
Sbjct: 65 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 124
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQR--IYQYIQSR 287
+ A+ +L + +NI H D+KPEN+L + + +AI K+ DFG + + + +
Sbjct: 125 IGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 182
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+Y +PEVL YD + DMWSLG I+ + G P F
Sbjct: 183 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVKLLEIM 172
+Y++ L+G G FG V + + VAIK ++ + P + +EV LL+ +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ ++RL F + L+ E +L+D + T + L R F Q
Sbjct: 65 SSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQ 118
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYIQSRFY 289
+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y + +R Y
Sbjct: 119 VLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 175
Query: 290 RSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
PE + Y + +WSLG +L +M G+ F E+
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVKLLEIM 172
+Y++ L+G G FG V + + VAIK ++ + P + +EV LL+ +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ ++RL F + L+ E +L+D + T + L R F Q
Sbjct: 65 SSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQ 118
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYIQSRFY 289
+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y + +R Y
Sbjct: 119 VLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 175
Query: 290 RSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
PE + Y + +WSLG +L +M G+ F E+
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 105/242 (43%), Gaps = 28/242 (11%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV- 177
D +EI +IG+G+F +V +++ V I NK L + ++ + DV
Sbjct: 61 DDFEILKVIGRGAFSEVA-VVKMKQTGQVYAMKIMNKWDMLKRGEVSC----FREERDVL 115
Query: 178 --NNTYYIVRLKRHFMWRNHLCLVFEL-LSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTA 234
+ +I +L F N+L LV E + +L LL R + + R + ++ A
Sbjct: 116 VNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMA 174
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ----RIYQYIQSRFYR 290
+ S L +H D+KP+NILL + I++ DFGS +L R + + Y
Sbjct: 175 ID--SVHRLGYVHRDIKPDNILL--DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYL 230
Query: 291 SPEVLLGIPYDLA-------IDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV---EVLG 340
SPE+L + D W+LG EM G+ F + + KIV E L
Sbjct: 231 SPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS 290
Query: 341 LP 342
LP
Sbjct: 291 LP 292
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 92 KKEKKLYNEGYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKI 151
+ + L + GYD + Q + L R +G GS+G+V K E+ A+K
Sbjct: 36 EASETLQSPGYDPSRPESFFQQSFQRLSR------LGHGSYGEVFKVRSKEDGRLYAVK- 88
Query: 152 IKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLL 211
++ PF KL E+ + V VRL++ + L L EL +L
Sbjct: 89 -RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQ--- 144
Query: 212 RNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG 271
++ G SL + + T L ++H D+KP NI L R K+ DFG
Sbjct: 145 QHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG--PRGRCKLGDFG 202
Query: 272 SSCQLGQRIYQYIQSR--FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+LG +Q Y +PE+L G Y A D++SLG ++E+ L G
Sbjct: 203 LLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW 261
Query: 330 DQMNKIVEVLGLPPK 344
Q+ + LPP+
Sbjct: 262 QQLRQGY----LPPE 272
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 21/219 (9%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK-NKKPFLNQAQIEVKLLEIMNKADVNNT--YYI 183
IG GSFG V A D+ VAIK + + K + Q +K + + K NT Y
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLR--NTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
L+ H W LV E + DLL + V + + Q L +L +
Sbjct: 83 CYLREHTAW-----LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ---GLAYLHSH 134
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGI--- 298
N+IH D+K NILL P +K+ DFGS+ + ++ + ++ +PEV+L +
Sbjct: 135 --NMIHRDVKAGNILLSEP--GLVKLGDFGSASIMAP-ANXFVGTPYWMAPEVILAMDEG 189
Query: 299 PYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVE 337
YD +D+WSLG +E+ +P N + + I +
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG+G+ G V A D+ VAI+ + ++ Q + E+ + EI+ + N IV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINEILVMRE-NKNPNIVNY 83
Query: 187 KRHFMWRNHLCLVFELLSY-NLYDLLRNTNF-RGVSLNLTRKFSQQLCTALLFLSTPELN 244
++ + L +V E L+ +L D++ T G + R+ Q AL FL + +
Sbjct: 84 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----ALEFLHSNQ-- 137
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQYIQSRFYRSPEVLLGIPYD 301
+IH ++K +NILL ++K+ DFG Q+ + + + ++ +PEV+ Y
Sbjct: 138 VIHRNIKSDNILL--GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 195
Query: 302 LAIDMWSLGCILVEMHTGEPLFSGSN 327
+D+WSLG + +EM GEP + N
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNEN 221
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 22/236 (9%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-------EVK 167
+K D Y+I +G G F V K + A K IK ++ ++ + EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRK 226
+L + + I+ L + R + L+ EL+S L+D L +S
Sbjct: 68 ILRQVLHPN------IITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATS 119
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLC--NPKRSAIKIVDFGSSCQL--GQRIYQ 282
F +Q+ + +L T + I H DLKPENI+L N IK++DFG + ++ G
Sbjct: 120 FIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 283 YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
+ + +PE++ P L DMWS+G I + +G F G + + + I V
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 22/229 (9%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
+D +EI +GKG FG V A + + VA+K+ L ++QIE + +E + ++
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKV-------LFKSQIEKEGVEHQLRREI 74
Query: 178 NNTYY-----IVRLKRHFMWRNHLCLVFELLSYN-LY-DLLRNTNFRGVSLNLTRKFSQQ 230
+ I+RL +F R + L+ E LY +L ++ F T ++
Sbjct: 75 EIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTF---DEQRTATIMEE 131
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-RIYQYIQSRFY 289
L AL++ + +IH D+KPEN+L + +KI DFG S R + Y
Sbjct: 132 LADALMYCHGKK--VIHRDIKPENLL--LGLKGELKIADFGWSVHAPSLRRKTMCGTLDY 187
Query: 290 RSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEV 338
PE++ G ++ +D+W +G + E+ G P F ++ + +IV+V
Sbjct: 188 LPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 10/225 (4%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQ--IEVKLLEIMNKADVN 178
+E+ +G G FG V++ + VAIK + + N+ + +E+++++ +N +V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRN-TNFRGVSLNLTRKFSQQLCTALL 236
+ + + + L E +L L N G+ R + +AL
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 237 FLSTPELNIIHCDLKPENILLC-NPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPE 293
+L E IIH DLKPENI+L P+R KI+D G + +L G+ +++ + Y +PE
Sbjct: 136 YLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPE 193
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTG-EPLFSGSNEVDQMNKIVE 337
+L Y + +D WS G + E TG P V K+ E
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE 238
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
+ RY +GKG F + + D++ + A K++ K L Q E EI +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEKMSTEIAIHKSL 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+N + +V F + + +V E+ +L +L + + V+ R F +Q +
Sbjct: 100 DNPH-VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQ 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYRSPE 293
+L +IH DLK N+ L + +KI DFG + ++ G+R + Y +PE
Sbjct: 157 YLHNN--RVIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE 212
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGS 326
VL + +D+WSLGCIL + G+P F S
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
+ RY +GKG F + + D++ + A K++ K L Q E EI +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEKMSTEIAIHKSL 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+N + +V F + + +V E+ +L +L + + V+ R F +Q +
Sbjct: 100 DNPH-VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQ 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYRSPE 293
+L +IH DLK N+ L + +KI DFG + ++ G+R + Y +PE
Sbjct: 157 YLHNN--RVIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPE 212
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGS 326
VL + +D+WSLGCIL + G+P F S
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 10/225 (4%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQ--IEVKLLEIMNKADVN 178
+E+ +G G FG V++ + VAIK + + N+ + +E+++++ +N +V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRN-TNFRGVSLNLTRKFSQQLCTALL 236
+ + + + L E +L L N G+ R + +AL
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 237 FLSTPELNIIHCDLKPENILLC-NPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPE 293
+L E IIH DLKPENI+L P+R KI+D G + +L G+ +++ + Y +PE
Sbjct: 137 YLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPE 194
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTG-EPLFSGSNEVDQMNKIVE 337
+L Y + +D WS G + E TG P V K+ E
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE 239
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
+ RY +GKG F + + D++ + A K++ K L Q E EI +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEKMSTEIAIHKSL 99
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+N + +V F + + +V E+ +L +L + + V+ R F +Q +
Sbjct: 100 DNPH-VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQ 156
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYRSPE 293
+L +IH DLK N+ L + +KI DFG + ++ G+R + Y +PE
Sbjct: 157 YLHNN--RVIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPE 212
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGS 326
VL + +D+WSLGCIL + G+P F S
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
+ RY +GKG F + + D++ + A K++ K L Q E EI +
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEKMSTEIAIHKSL 83
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+N + +V F + + +V E+ +L +L + + V+ R F +Q +
Sbjct: 84 DNPH-VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQ 140
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYRSPE 293
+L +IH DLK N+ L + +KI DFG + ++ G+R + Y +PE
Sbjct: 141 YLHNN--RVIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE 196
Query: 294 VLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGS 326
VL + +D+WSLGCIL + G+P F S
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMN 173
L +++ +IG+GS+ +V+ + A+K++K N ++ Q E + E
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE--- 64
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF-RGVSLNLTRKFSQQLC 232
+N ++V L F + L V E + N DL+ + R + R +S ++
Sbjct: 65 --QASNHPFLVGLHSCFQTESRLFFVIEYV--NGGDLMFHMQRQRKLPEEHARFYSAEIS 120
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR----IYQYIQSRF 288
AL +L E II+ DLK +N+LL IK+ D+G C+ G R + +
Sbjct: 121 LALNYLH--ERGIIYRDLKLDNVLL--DSEGHIKLTDYGM-CKEGLRPGDTTSXFCGTPN 175
Query: 289 YRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
Y +PE+L G Y ++D W+LG ++ EM G F
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 29/257 (11%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV--- 177
+EI +IG+G+FG+V + A+KI+ NK L +A+ + DV
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL-NKWEMLKRAETAC----FREERDVLVN 130
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFEL-LSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+ +I L F NHL LV + + +L LL + + ++ R + ++ A+
Sbjct: 131 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAID 189
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF------YR 290
S +L+ +H D+KP+N+LL I++ DFGS ++ +QS Y
Sbjct: 190 --SIHQLHYVHRDIKPDNVLL--DVNGHIRLADFGSCLKMNDD--GTVQSSVAVGTPDYI 243
Query: 291 SPEVLLGIP-----YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV--EVLGLPP 343
SPE+L + Y D WSLG + EM GE F + V+ KI+ E P
Sbjct: 244 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 303
Query: 344 KHLLDGAHKTRKYFDKM 360
H+ D + + + ++
Sbjct: 304 SHVTDVSEEAKDLIQRL 320
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 29/257 (11%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV--- 177
+EI +IG+G+FG+V + A+KI+ NK L +A+ + DV
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL-NKWEMLKRAETAC----FREERDVLVN 146
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFEL-LSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+ +I L F NHL LV + + +L LL + + ++ R + ++ A+
Sbjct: 147 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAID 205
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF------YR 290
S +L+ +H D+KP+N+LL I++ DFGS ++ +QS Y
Sbjct: 206 --SIHQLHYVHRDIKPDNVLL--DVNGHIRLADFGSCLKMNDD--GTVQSSVAVGTPDYI 259
Query: 291 SPEVLLGIP-----YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV--EVLGLPP 343
SPE+L + Y D WSLG + EM GE F + V+ KI+ E P
Sbjct: 260 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 319
Query: 344 KHLLDGAHKTRKYFDKM 360
H+ D + + + ++
Sbjct: 320 SHVTDVSEEAKDLIQRL 336
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 118 LDRYEIDSLIGKGSFGQVV----KAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMN 173
L +++ +IG+GS+ +V+ K D V K + N ++ Q E + E
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE--- 107
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF-RGVSLNLTRKFSQQLC 232
+N ++V L F + L V E + N DL+ + R + R +S ++
Sbjct: 108 --QASNHPFLVGLHSCFQTESRLFFVIEYV--NGGDLMFHMQRQRKLPEEHARFYSAEIS 163
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR----IYQYIQSRF 288
AL +L E II+ DLK +N+LL IK+ D+G C+ G R + +
Sbjct: 164 LALNYLH--ERGIIYRDLKLDNVLL--DSEGHIKLTDYGM-CKEGLRPGDTTSTFCGTPN 218
Query: 289 YRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
Y +PE+L G Y ++D W+LG ++ EM G F
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 37/230 (16%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII-KNKKPFLNQAQIEVKLLEIMNK 174
+F D YE+ IG GS+ + A+KII K+K+ + +I ++ + N
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPN- 77
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
I+ LK + ++ +V EL L D + F FS++ +
Sbjct: 78 --------IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF----------FSEREAS 119
Query: 234 ALLFLSTPEL------NIIHCDLKPENILLC----NPKRSAIKIVDFGSSCQLGQR---I 280
A+LF T + ++H DLKP NIL NP+ +I+I DFG + QL +
Sbjct: 120 AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPE--SIRICDFGFAKQLRAENGLL 177
Query: 281 YQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTG-EPLFSGSNEV 329
+ + +PEVL YD A D+WSLG +L TG P +G ++
Sbjct: 178 XTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDT 227
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMN 173
L +++ +IG+GS+ +V+ + A+K++K N ++ Q E + E
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE--- 75
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF-RGVSLNLTRKFSQQLC 232
+N ++V L F + L V E + N DL+ + R + R +S ++
Sbjct: 76 --QASNHPFLVGLHSCFQTESRLFFVIEYV--NGGDLMFHMQRQRKLPEEHARFYSAEIS 131
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR----IYQYIQSRF 288
AL +L E II+ DLK +N+LL IK+ D+G C+ G R + +
Sbjct: 132 LALNYLH--ERGIIYRDLKLDNVLL--DSEGHIKLTDYGM-CKEGLRPGDTTSXFCGTPN 186
Query: 289 YRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
Y +PE+L G Y ++D W+LG ++ EM G F
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMN 173
L +++ +IG+GS+ +V+ + A+K++K N ++ Q E + E
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE--- 60
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNF-RGVSLNLTRKFSQQLC 232
+N ++V L F + L V E + N DL+ + R + R +S ++
Sbjct: 61 --QASNHPFLVGLHSCFQTESRLFFVIEYV--NGGDLMFHMQRQRKLPEEHARFYSAEIS 116
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR----IYQYIQSRF 288
AL +L E II+ DLK +N+LL IK+ D+G C+ G R + +
Sbjct: 117 LALNYLH--ERGIIYRDLKLDNVLL--DSEGHIKLTDYGM-CKEGLRPGDTTSXFCGTPN 171
Query: 289 YRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
Y +PE+L G Y ++D W+LG ++ EM G F
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 30/252 (11%)
Query: 92 KKEKKLYNEGYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKI 151
+++ K+ G D ++ + I+ E L + IG GSFG V K + VA+KI
Sbjct: 14 QEKNKIRPRGQRDSSYYWEIEASEVMLS-----TRIGSGSFGTVYKG---KWHGDVAVKI 65
Query: 152 IKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDL 210
+K P Q Q + ++ K N + L +M +++L +V + +LY
Sbjct: 66 LKVVDPTPEQFQAFRNEVAVLRKTRHVN----ILLFMGYMTKDNLAIVTQWCEGSSLYKH 121
Query: 211 L--RNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIV 268
L + T F+ L ++Q + +L NIIH D+K NI L + +KI
Sbjct: 122 LHVQETKFQMFQL---IDIARQTAQGMDYLHAK--NIIHRDMKSNNIFL--HEGLTVKIG 174
Query: 269 DFG-----SSCQLGQRIYQYIQSRFYRSPEVLL---GIPYDLAIDMWSLGCILVEMHTGE 320
DFG S Q++ Q S + +PEV+ P+ D++S G +L E+ TGE
Sbjct: 175 DFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
Query: 321 PLFSGSNEVDQM 332
+S N DQ+
Sbjct: 235 LPYSHINNRDQI 246
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 41/276 (14%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKI--IKNKKPFLNQAQIEVKLLEIMNKAD 176
+RY + IG GSFG + D+ VAIK+ +K K P Q IE K+ ++M +
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP---QLHIESKIYKMM-QGG 62
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
V I ++ ++ +V ELL +L DL N R SL + Q+ + +
Sbjct: 63 VG----IPTIRWCGAEGDYNVMVMELLGPSLEDLF-NFCSRKFSLKTVLLLADQMISRIE 117
Query: 237 FLSTPELNIIHCDLKPENILL-CNPKRSAIKIVDFGSSCQL-GQRIYQYIQSR------- 287
++ + N IH D+KP+N L+ K + + I+DFG + + R +Q+I R
Sbjct: 118 YIHSK--NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTG 175
Query: 288 --FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVD-----------QMNK 334
Y S LGI D+ SLG +L+ + G + G +M+
Sbjct: 176 TARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 235
Query: 335 IVEVL--GLPPKH--LLDGAHKTRKYFDKMPDGSYI 366
+EVL G P + L+ R FD PD SY+
Sbjct: 236 PIEVLCKGYPSEFATYLNFCRSLR--FDDKPDYSYL 269
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 41/276 (14%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKI--IKNKKPFLNQAQIEVKLLEIMNKAD 176
+RY + IG GSFG + D+ VAIK+ +K K P Q IE K+ ++M +
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP---QLHIESKIYKMM-QGG 64
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
V I ++ ++ +V ELL +L DL N R SL + Q+ + +
Sbjct: 65 VG----IPTIRWCGAEGDYNVMVMELLGPSLEDLF-NFCSRKFSLKTVLLLADQMISRIE 119
Query: 237 FLSTPELNIIHCDLKPENILL-CNPKRSAIKIVDFGSSCQL-GQRIYQYIQSR------- 287
++ + N IH D+KP+N L+ K + + I+DFG + + R +Q+I R
Sbjct: 120 YIHSK--NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTG 177
Query: 288 --FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVD-----------QMNK 334
Y S LGI D+ SLG +L+ + G + G +M+
Sbjct: 178 TARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237
Query: 335 IVEVL--GLPPKH--LLDGAHKTRKYFDKMPDGSYI 366
+EVL G P + L+ R FD PD SY+
Sbjct: 238 PIEVLCKGYPSEFATYLNFCRSLR--FDDKPDYSYL 271
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 108/233 (46%), Gaps = 23/233 (9%)
Query: 117 FLDRYEID---SLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-EVKLLEIM 172
F Y++D +G+GSF K + A+KII + Q +I +KL E
Sbjct: 6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCE-- 63
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQL 231
IV+L F + H LV ELL+ L++ ++ + S ++L
Sbjct: 64 ------GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKL 115
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRS-AIKIVDFGSSCQL----GQRIYQYIQS 286
+A+ + ++ ++H DLKPEN+L + + IKI+DFG + +L Q + +
Sbjct: 116 VSAVSHMH--DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFA-RLKPPDNQPLKTPCFT 172
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVL 339
Y +PE+L YD + D+WSLG IL M +G+ F + VE++
Sbjct: 173 LHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM 225
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 32/232 (13%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII-------KNKKPFLNQAQIEVKLLEIMN 173
YE+ +IG+G+FG+V + A+K++ ++ F + + +IM
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER------DIMA 129
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
A N+ ++V+L F +L +V E + +L +L+ N + V R ++ ++
Sbjct: 130 FA---NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVV 183
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ----RIYQYIQSRF 288
AL + + + IH D+KP+N+LL K +K+ DFG+ ++ + R + +
Sbjct: 184 LALDAIHS--MGFIHRDVKPDNMLL--DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 289 YRSPEVLLGIP----YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV 336
Y SPEVL Y D WS+G L EM G+ F + V +KI+
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 32/232 (13%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII-------KNKKPFLNQAQIEVKLLEIMN 173
YE+ +IG+G+FG+V + A+K++ ++ F + + +IM
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER------DIMA 124
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
A N+ ++V+L F +L +V E + +L +L+ N + V R ++ ++
Sbjct: 125 FA---NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVV 178
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ----RIYQYIQSRF 288
AL + + + IH D+KP+N+LL K +K+ DFG+ ++ + R + +
Sbjct: 179 LALDAIHS--MGFIHRDVKPDNMLL--DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 234
Query: 289 YRSPEVLLGIP----YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV 336
Y SPEVL Y D WS+G L EM G+ F + V +KI+
Sbjct: 235 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 32/232 (13%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII-------KNKKPFLNQAQIEVKLLEIMN 173
YE+ +IG+G+FG+V + A+K++ ++ F + + +IM
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER------DIMA 129
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
A N+ ++V+L F +L +V E + +L +L+ N + V R ++ ++
Sbjct: 130 FA---NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVV 183
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ----RIYQYIQSRF 288
AL + + + IH D+KP+N+LL K +K+ DFG+ ++ + R + +
Sbjct: 184 LALDAIHS--MGFIHRDVKPDNMLL--DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 289 YRSPEVLLGIP----YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV 336
Y SPEVL Y D WS+G L EM G+ F + V +KI+
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 118 LDRYEIDSL-------IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI-- 164
LD++E++ +G G FG+V + + VA+K +K + FL +A +
Sbjct: 3 LDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 62
Query: 165 EVK---LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVS 220
E+K L++++ +YI+ E ++Y NL D LR N + VS
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIIT---------------EFMTYGNLLDYLRECNRQEVS 107
Query: 221 LNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQR 279
+ + Q+ +A+ +L N IH DL N L+ + +K+ DFG S G
Sbjct: 108 AVVLLYMATQISSAMEYLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDT 163
Query: 280 IYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ ++F + +PE L + + D+W+ G +L E+ T
Sbjct: 164 XTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 197 CLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQ---QLCTALLFLSTPELNIIHCDLKPE 253
CL+ + +L RG R+ ++ + TA+ FL + NI H D+KPE
Sbjct: 81 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH--NIAHRDVKPE 138
Query: 254 NILLCNPKRSAI-KIVDFGSSCQLGQRIYQY-IQSRFYRSPEVLLGIPYDLAIDMWSLGC 311
N+L + ++ A+ K+ DFG + + Q Q + +Y +PEVL YD + DMWSLG
Sbjct: 139 NLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 198
Query: 312 ILVEMHTGEPLF 323
I+ + G P F
Sbjct: 199 IMYILLCGFPPF 210
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 27/231 (11%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV--- 177
+EI +IG+G+FG+V L+ V I NK L +A+ + DV
Sbjct: 76 FEILKVIGRGAFGEVA-VVKLKNADKVFAMKILNKWEMLKRAETAC----FREERDVLVN 130
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFEL-LSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
++ +I L F N+L LV + + +L LL R + + R + ++ A+
Sbjct: 131 GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAID 189
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF------YR 290
S +L+ +H D+KP+NIL+ I++ DFGS +L + +QS Y
Sbjct: 190 --SVHQLHYVHRDIKPDNILM--DMNGHIRLADFGSCLKLMED--GTVQSSVAVGTPDYI 243
Query: 291 SPEVLLGIP-----YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV 336
SPE+L + Y D WSLG + EM GE F + V+ KI+
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 197 CLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQ---QLCTALLFLSTPELNIIHCDLKPE 253
CL+ + +L RG R+ ++ + TA+ FL + NI H D+KPE
Sbjct: 100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH--NIAHRDVKPE 157
Query: 254 NILLCNPKRSAI-KIVDFGSSCQLGQRIYQY-IQSRFYRSPEVLLGIPYDLAIDMWSLGC 311
N+L + ++ A+ K+ DFG + + Q Q + +Y +PEVL YD + DMWSLG
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 217
Query: 312 ILVEMHTGEPLF 323
I+ + G P F
Sbjct: 218 IMYILLCGFPPF 229
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 118 LDRYEIDSL-------IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI-- 164
LD++E++ +G G +G+V + + VA+K +K + FL +A +
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 62
Query: 165 EVK---LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVS 220
E+K L++++ +YI+ E ++Y NL D LR N + VS
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIIT---------------EFMTYGNLLDYLRECNRQEVS 107
Query: 221 LNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQR 279
+ + Q+ +A+ +L N IH DL N L+ + +K+ DFG S G
Sbjct: 108 AVVLLYMATQISSAMEYLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDT 163
Query: 280 IYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ ++F + +PE L + + D+W+ G +L E+ T
Sbjct: 164 FTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 20/216 (9%)
Query: 117 FLDRYEIDS-LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+D Y++ S ++G G G+V++ F+ Q A+K +++ +A+ EV+L
Sbjct: 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQD----CPKARREVEL-----HW 109
Query: 176 DVNNTYYIVRL----KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +IVR+ + + R L +V E L L+ +++ + + + +
Sbjct: 110 RASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKS 169
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQR--IYQYIQSR 287
+ A+ +L + +NI H D+KPEN+L + + +AI K+ DFG + + + +
Sbjct: 170 IGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 227
Query: 288 FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
+Y +PEVL YD + D WSLG I + G P F
Sbjct: 228 YYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 18/226 (7%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
Y++ +IG+G+FG+V Q A+K++ +K + ++ E + N+
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLL-SKFEMIKRSD-SAFFWEERDIMAFANS 134
Query: 181 YYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLS 239
++V+L F +L +V E + +L +L+ N + V + ++ ++ AL +
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD---VPEKWAKFYTAEVVLALDAIH 191
Query: 240 TPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----YRSPEVL 295
+ + +IH D+KP+N+LL K +K+ DFG+ ++ + + + Y SPEVL
Sbjct: 192 S--MGLIHRDVKPDNMLL--DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVL 247
Query: 296 LGIP----YDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVE 337
Y D WS+G L EM G+ F + V +KI++
Sbjct: 248 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMD 293
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 99 NEGYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIK---IIKNK 155
+ G D + Q EK++ +I G+GSFG+ + E+ IK I +
Sbjct: 8 SSGVDLGTENLYFQSMEKYVRLQKI----GEGSFGKAILVKSTEDGRQYVIKEINISRMS 63
Query: 156 KPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTN 215
+++ EV +L M + IV+ + F L +V + DL + N
Sbjct: 64 SKEREESRREVAVLANMKHPN------IVQYRESFEENGSLYIVMDYCEGG--DLFKRIN 115
Query: 216 F-RGVSLNLTR--KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGS 272
+GV + + Q+C AL + + I+H D+K +NI L K +++ DFG
Sbjct: 116 AQKGVLFQEDQILDWFVQICLALKHVH--DRKILHRDIKSQNIFLT--KDGTVQLGDFGI 171
Query: 273 SCQLGQRI---YQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+ L + I + +Y SPE+ PY+ D+W+LGC+L E+ T + F +
Sbjct: 172 ARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK 231
Query: 330 DQMNKIVEVLGLPPKHL 346
+ + KI+ PP L
Sbjct: 232 NLVLKIISG-SFPPVSL 247
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 100/236 (42%), Gaps = 33/236 (13%)
Query: 105 DNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI 164
D D++ Q E R + ++ +G F V +A D+ A+K + + + N+A I
Sbjct: 14 DQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAII 73
Query: 165 EVKLLEIMNKADVNNTYYIVRL--------KRHFMWRNHLCLVFELLSYNLYDLLRNTNF 216
+ E+ ++ IV+ + + L+ EL L + L+
Sbjct: 74 Q----EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMES 129
Query: 217 RG-VSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 275
RG +S + K Q C A+ + + IIH DLK EN+LL N + IK+ DFGS+
Sbjct: 130 RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN--QGTIKLCDFGSATT 187
Query: 276 LGQRI-YQYIQSR--------------FYRSPEVL---LGIPYDLAIDMWSLGCIL 313
+ Y + R YR+PE++ P D+W+LGCIL
Sbjct: 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 118 LDRYEIDSL-------IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI-- 164
LD++E++ +G G +G+V + + VA+K +K + FL +A +
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 62
Query: 165 EVK---LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVS 220
E+K L++++ +YI+ E ++Y NL D LR N + VS
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYII---------------IEFMTYGNLLDYLRECNRQEVS 107
Query: 221 LNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQR 279
+ + Q+ +A+ +L N IH DL N L+ + +K+ DFG S G
Sbjct: 108 AVVLLYMATQISSAMEYLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDT 163
Query: 280 IYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ ++F + +PE L + + D+W+ G +L E+ T
Sbjct: 164 XTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 15/246 (6%)
Query: 101 GYDDDNHDYIIQHGEKFLDRYEIDSL-IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFL 159
G D + Q E F + Y + S +G+G F V + A K +K ++
Sbjct: 10 GVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ 69
Query: 160 N-QAQI--EVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTN 215
+ +A+I E+ +LE+ ++ L + + + L+ E + ++ L
Sbjct: 70 DCRAEILHEIAVLELAKSCP-----RVINLHEVYENTSEIILILEYAAGGEIFSLCLPEL 124
Query: 216 FRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNP-KRSAIKIVDFGSSC 274
VS N + +Q+ + +L + NI+H DLKP+NILL + IKIVDFG S
Sbjct: 125 AEMVSENDVIRLIKQILEGVYYLH--QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182
Query: 275 QLGQ--RIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQM 332
++G + + + + Y +PE+L P A DMW++G I + T F G + +
Sbjct: 183 KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242
Query: 333 NKIVEV 338
I +V
Sbjct: 243 LNISQV 248
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 121/276 (43%), Gaps = 41/276 (14%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKI--IKNKKPFLNQAQIEVKLLEIMNKAD 176
++Y + IG GSFG + ++ VAIK+ +K K P Q IE K ++M +
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHP---QLHIESKFYKMM-QGG 64
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
V I +K ++ +V ELL +L DL N R SL + Q+ + +
Sbjct: 65 VG----IPSIKWCGAEGDYNVMVMELLGPSLEDLF-NFCSRKFSLKTVLLLADQMISRIE 119
Query: 237 FLSTPELNIIHCDLKPENILL-CNPKRSAIKIVDFGSSCQL-GQRIYQYIQSR------- 287
++ + N IH D+KP+N L+ K + + I+DFG + + R +Q+I R
Sbjct: 120 YIHSK--NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTG 177
Query: 288 --FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVD-----------QMNK 334
Y S LGI D+ SLG +L+ + G + G +M+
Sbjct: 178 TARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237
Query: 335 IVEVL--GLPPKH--LLDGAHKTRKYFDKMPDGSYI 366
+EVL G P + L+ R FD PD SY+
Sbjct: 238 PIEVLCKGYPSEFSTYLNFCRSLR--FDDKPDYSYL 271
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 219 VSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
+S++ F+ Q+ + ++ I+H D+KP+NIL+ + K +KI DFG + L +
Sbjct: 108 LSVDTAINFTNQILDGIKH--AHDMRIVHRDIKPQNILIDSNK--TLKIFDFGIAKALSE 163
Query: 279 ----RIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+ + + Y SPE G D D++S+G +L EM GEP F+G V
Sbjct: 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + VS + + Q+ +A+
Sbjct: 86 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 130
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 131 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + VS + + Q+ +A+
Sbjct: 81 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 126 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + VS + + Q+ +A+
Sbjct: 81 EPPFYII---------------IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 126 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + VS + + Q+ +A+
Sbjct: 81 EPPFYII---------------IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 126 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + VS + + Q+ +A+
Sbjct: 81 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 126 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 64 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 115
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL----GQRIYQYIQSRF- 288
+++L + I H D+KPEN+LL +R +KI DFG + +R+ +
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 64
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 65 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 116
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL----GQRIYQYIQSRF- 288
+++L + I H D+KPEN+LL +R +KI DFG + +R+ +
Sbjct: 117 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D YE+ +IG G+ V A+ ++ VAIK I +K + ++ +K ++ M++
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL-LKEIQAMSQCHHP 73
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRG------VSLNLTRKFSQQL 231
N IV F+ ++ L LV +LLS ++ D++++ +G + + +++
Sbjct: 74 N---IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQ------Y 283
L +L IH D+K NILL + +++I DFG S L G I + +
Sbjct: 131 LEGLEYLHKN--GQIHRDVKAGNILL--GEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 284 IQSRFYRSPEVLLGI-PYDLAIDMWSLGCILVEMHTG 319
+ + + +PEV+ + YD D+WS G +E+ TG
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 120/271 (44%), Gaps = 62/271 (22%)
Query: 120 RYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII-KNKKPFLN-----QAQIEVKLLEIMN 173
+Y + IG+GS+G V A + + + AIKI+ KNK +N + + EV+L++ ++
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELL-------SYNLY----------DLLR---- 212
+ I RL + ++CLV EL N++ D+++
Sbjct: 87 HPN------IARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 213 ----------NTNFRGV--SLNLTRK------FSQQLCTALLFLSTPELNIIHCDLKPEN 254
N + G SL+ ++ +Q+ +AL +L I H D+KPEN
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ--GICHRDIKPEN 198
Query: 255 ILLCNPKRSAIKIVDFGSSCQ---LGQRIYQYIQSR----FYRSPEVL--LGIPYDLAID 305
L K IK+VDFG S + L Y + ++ ++ +PEVL Y D
Sbjct: 199 FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258
Query: 306 MWSLGCILVEMHTGEPLFSGSNEVDQMNKIV 336
WS G +L + G F G N+ D +++++
Sbjct: 259 AWSAGVLLHLLLMGAVPFPGVNDADTISQVL 289
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN 178
D YE+ +IG G+ V A+ ++ VAIK I +K + ++ +K ++ M++
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL-LKEIQAMSQCHHP 68
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRG------VSLNLTRKFSQQL 231
N IV F+ ++ L LV +LLS ++ D++++ +G + + +++
Sbjct: 69 N---IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQ------Y 283
L +L IH D+K NILL + +++I DFG S L G I + +
Sbjct: 126 LEGLEYLHKN--GQIHRDVKAGNILL--GEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 284 IQSRFYRSPEVLLGI-PYDLAIDMWSLGCILVEMHTG 319
+ + + +PEV+ + YD D+WS G +E+ TG
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + VS + + Q+ +A+
Sbjct: 288 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 332
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L + N IH +L N L+ + +K+ DFG S G + ++F + +P
Sbjct: 333 YLE--KKNFIHRNLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 388
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 389 ESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 40/222 (18%)
Query: 118 LDRYEIDSL-------IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI-- 164
+D++E++ +G G +G+V + VA+K +K + FL +A +
Sbjct: 24 MDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 83
Query: 165 EVK---LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVS 220
E+K L++++ + +YIV E + Y NL D LR N V+
Sbjct: 84 EIKHPNLVQLLGVCTLEPPFYIVT---------------EYMPYGNLLDYLRECNREEVT 128
Query: 221 LNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQR 279
+ + Q+ +A+ +L N IH DL N L+ + +K+ DFG S G
Sbjct: 129 AVVLLYMATQISSAMEYLEKK--NFIHRDLAARNCLV--GENHVVKVADFGLSRLMTGDT 184
Query: 280 IYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ ++F + +PE L + + D+W+ G +L E+ T
Sbjct: 185 YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 128/295 (43%), Gaps = 36/295 (12%)
Query: 99 NEGYDDDNHDYIIQHGEKFLDRYEIDSL-----IGKGSFGQVVKAFDLEEQCHVAIKIIK 153
+ G Y+ G+++ + EI+ L +G G+ GQV K + +A+K ++
Sbjct: 2 SSGSSGKQTGYLTIGGQRY--QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR 59
Query: 154 NKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRN 213
+I + L ++ D YIV+ F+ + + EL+ + L+
Sbjct: 60 RSGNKEENKRILMDLDVVLKSHDCP---YIVQCFGTFITNTDVFIAMELMG-TCAEKLKK 115
Query: 214 TNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+ + K + + AL +L +IH D+KP NILL +R IK+ DFG S
Sbjct: 116 RMQGPIPERILGKMTVAIVKALYYLKEKH-GVIHRDVKPSNILL--DERGQIKLCDFGIS 172
Query: 274 CQL--GQRIYQYIQSRFYRSPEVL-----LGIPYDLAIDMWSLGCILVEMHTGE-PLFSG 325
+L + + Y +PE + YD+ D+WSLG LVE+ TG+ P +
Sbjct: 173 GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC 232
Query: 326 SNEVDQMNKIV-EVLGLPPKHL-------------LDGAHKTRKYFDKMPDGSYI 366
+ + + K++ E L P H+ L H+ R ++K+ + S+I
Sbjct: 233 KTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 64 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 115
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 82 EPPFYII---------------IEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 126
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 127 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 182
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G+FG V + IK I + + QIE ++ E++ D N I+++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEI-EVLKSLDHPN---IIKI 85
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLN--LTRKFSQQLCTALLFLSTPEL 243
F +++ +V E L + + + RG +L+ + +Q+ AL + +
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-- 143
Query: 244 NIIHCDLKPENILLCNPK-RSAIKIVDFGSS--CQLGQRIYQYIQSRFYRSPEVLLGIPY 300
+++H DLKPENIL + S IKI+DFG + + + + Y +PEV
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV-FKRDV 202
Query: 301 DLAIDMWSLGCILVEMHTGEPLFSGSN--EVDQ 331
D+WS G ++ + TG F+G++ EV Q
Sbjct: 203 TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ 235
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 64 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 115
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL----GQRIYQYIQSRF- 288
+++L + I H D+KPEN+LL +R +KI DFG + +R+ +
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 83 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 128 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 183
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 64 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 115
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 289 YRSPEVLLGIPYDL-AIDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 86 EPPFYII---------------IEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 131 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 86 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 131 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 83 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 128 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 183
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 86 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 131 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 186
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 85 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 129
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 130 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 185
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 186 ESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 65 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 116
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 117 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 289 YRSPEVLLGIPYDL-AIDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 86 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 131 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 94 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 138
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 139 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 194
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 195 ESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 25 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 77
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 78 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 130
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 131 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 186
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 187 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 64 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 115
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL----GQRIYQYIQSRF- 288
+++L + I H D+KPEN+LL +R +KI DFG + +R+ +
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 49 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 101
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 102 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 154
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 155 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 210
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 211 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 81 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 125
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 126 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 24 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 76
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 77 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 129
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 130 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 185
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 186 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 123 IDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNK-----KPFLNQAQIEVKLLEIMNKADV 177
++ +IG G FG+V +AF + ++ VA+K ++ + + E KL ++ +
Sbjct: 11 LEEIIGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN- 67
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
I+ L+ + +LCLV E L R + + + ++ ++ Q+ + +
Sbjct: 68 -----IIALRGVCLKEPNLCLVMEFARGG--PLNRVLSGKRIPPDILVNWAVQIARGMNY 120
Query: 238 LSTPEL-NIIHCDLKPENILLCNPKRSA------IKIVDFGSSCQLGQRIYQYIQSRF-Y 289
L + IIH DLK NIL+ + +KI DFG + + + + +
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAW 180
Query: 290 RSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSG 325
+PEV+ + D+WS G +L E+ TGE F G
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 21 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 74 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 126
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 127 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 23 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 75
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 76 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 128
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 129 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 184
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 185 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 64 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 115
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL----GQRIYQYIQSRF- 288
+++L + I H D+KPEN+LL +R +KI DFG + +R+ +
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 81 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 125
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G + ++F + +P
Sbjct: 126 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 65 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 116
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 117 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 65 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 116
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 117 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 65 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 116
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 117 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 110/234 (47%), Gaps = 17/234 (7%)
Query: 113 HGEKF-LDRYEIDSLIGKGSFGQV--VKAFDLEEQCHV-AIKIIKNKKPFLNQAQIEVKL 168
H EK ++ +E+ ++G G++G+V V+ + + A+K++K E
Sbjct: 47 HAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTR 106
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG-VSLNLTRKF 227
E + + ++V L F L L+ + + N +L + + R + + + +
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYI--NGGELFTHLSQRERFTEHEVQIY 164
Query: 228 SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL----GQRIYQY 283
++ AL L +L II+ D+K ENILL + + + DFG S + +R Y +
Sbjct: 165 VGEIVLALEHLH--KLGIIYRDIKLENILLDS--NGHVVLTDFGLSKEFVADETERAYDF 220
Query: 284 IQSRFYRSPEVLLG--IPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKI 335
+ Y +P+++ G +D A+D WSLG ++ E+ TG F+ E + +I
Sbjct: 221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI 274
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 22 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 74
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 75 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 127
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 128 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 183
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 184 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 62
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 63 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 114
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 115 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 170
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 171 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 16 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 68
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 69 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 121
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 122 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 177
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 178 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 17 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 69
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 70 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 122
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 123 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 178
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 179 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 18 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 71 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 123
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 124 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 64 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 115
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 65 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 116
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 117 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 18 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 71 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 123
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 124 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 327 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 371
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L + N IH +L N L+ + +K+ DFG S G + ++F + +P
Sbjct: 372 YLE--KKNFIHRNLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 427
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 428 ESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 18 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 71 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 123
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 124 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEFFKVKEPGES 179
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 64 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 115
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 36 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 88
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 89 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 141
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 142 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 198 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 36 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 88
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 89 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 141
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 142 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 198 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 30/224 (13%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
++ EI LIGKG FGQV + VAI++I ++ N+ Q++ E+M
Sbjct: 32 FEQLEIGELIGKGRFGQV---YHGRWHGEVAIRLIDIERD--NEDQLKAFKREVMAYRQT 86
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+ +V M HL ++ L LY ++R+ + +N TR+ +Q++ +
Sbjct: 87 RHE-NVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIV-LDVNKTRQIAQEIVKGMG 144
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-----SSCQLGQRIYQY-IQSRF-- 288
+L I+H DLK +N+ N K + I DFG Q G+R + IQ+ +
Sbjct: 145 YLHAK--GILHKDLKSKNVFYDNGK---VVITDFGLFSISGVLQAGRREDKLRIQNGWLC 199
Query: 289 YRSPEVLL---------GIPYDLAIDMWSLGCILVEMHTGEPLF 323
+ +PE++ +P+ D+++LG I E+H E F
Sbjct: 200 HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 64 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 115
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 26/261 (9%)
Query: 92 KKEKKLYNEGYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKI 151
KK ++ G D + D+ I G+ + IG GSFG V K + VA+K+
Sbjct: 2 KKGHHHHHHGSRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKG---KWHGDVAVKM 53
Query: 152 IKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDL 210
+ P Q Q + ++ K N + L + + L +V + +LY
Sbjct: 54 LNVTAPTPQQLQAFKNEVGVLRKTRHVN----ILLFMGYSTKPQLAIVTQWCEGSSLYHH 109
Query: 211 LRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDF 270
L + + + ++Q + +L +IIH DLK NI L + + +KI DF
Sbjct: 110 LHASETK-FEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNNIFL--HEDNTVKIGDF 164
Query: 271 G-----SSCQLGQRIYQYIQSRFYRSPEVLL---GIPYDLAIDMWSLGCILVEMHTGEPL 322
G S + Q S + +PEV+ PY D+++ G +L E+ TG+
Sbjct: 165 GLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
Query: 323 FSGSNEVDQMNKIVEVLGLPP 343
+S N DQ+ ++V L P
Sbjct: 225 YSNINNRDQIIEMVGRGSLSP 245
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 21 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 74 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL-QYTSQI 126
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 127 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 285 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 329
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH +L N L+ + +K+ DFG S G + ++F + +P
Sbjct: 330 YLEKK--NFIHRNLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 385
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 386 ESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 64 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 115
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 64 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 115
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D R G+ ++F QL
Sbjct: 65 ENV------VKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMA 116
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 117 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 19 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 71
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L D L+ R + L +++ Q+
Sbjct: 72 DN------IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 124
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSR---- 287
C + +L T IH +L NIL+ N R +KI DFG + L Q Y
Sbjct: 125 CKGMEYLGTKRY--IHRNLATRNILVENENR--VKIGDFGLTKVLPQDKEYYKVKEPGES 180
Query: 288 --FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 181 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G++G+V A + + VA+KI+ K+ I E+ + ++N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNH 64
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D R G+ ++F QL
Sbjct: 65 ENV------VKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMA 116
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 117 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 127 IGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNK-KPFLNQAQIEVKLLEIMNK 174
+GKG+FG V E C VA+K +++ + L + E+++L+ +
Sbjct: 21 LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 175 ADVNNTYYIVRLKR--HFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQL 231
+ IV+ K + R +L L+ E L Y +L + L+ R + L +++ Q+
Sbjct: 74 DN------IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLL-QYTSQI 126
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQS 286
C + +L T IH DL NIL+ N R +KI DFG + L Q ++ + +S
Sbjct: 127 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 287 R-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + +A D+WS G +L E+ T
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 18/228 (7%)
Query: 124 DSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
D IG+GSF V K D E VA ++++K ++ Q + E + N I
Sbjct: 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN---I 87
Query: 184 VRLKRHFMW------RNHLCLVFEL-LSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
VR + W + + LV EL S L L+ F+ + + R + +Q+ L
Sbjct: 88 VRF--YDSWESTVKGKKCIVLVTELXTSGTLKTYLKR--FKVXKIKVLRSWCRQILKGLQ 143
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRFYRSPEVL 295
FL T IIH DLK +NI + P S +KI D G ++ + I + + +PE
Sbjct: 144 FLHTRTPPIIHRDLKCDNIFITGPTGS-VKIGDLGLATLKRASFAKAVIGTPEFXAPEXY 202
Query: 296 LGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPP 343
YD ++D+++ G +E T E +S Q+ + V G+ P
Sbjct: 203 EE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRV-TSGVKP 248
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 24/220 (10%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKI--IKNKKPFLNQAQIEVKLLEIMNKAD 176
+++ + IG GSFG++ +++ VAIK+ +K K P Q E K+ I+
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP---QLLYESKIYRILQGGT 63
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
I ++ + ++ LV +LL +L DL N R +SL + Q+ +
Sbjct: 64 G-----IPNVRWFGVEGDYNVLVMDLLGPSLEDLF-NFCSRKLSLKTVLMLADQMINRVE 117
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRS-AIKIVDFGSSCQL-GQRIYQYIQSR------- 287
F+ + + +H D+KP+N L+ +R+ + I+DFG + + +Q+I R
Sbjct: 118 FVHSK--SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTG 175
Query: 288 --FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSG 325
Y S LGI D+ SLG +L+ G + G
Sbjct: 176 TARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 215
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 83 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G ++F + +P
Sbjct: 128 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAP 183
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 33/206 (16%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNK----KPFLNQAQI--EVK---LLEIMNKADV 177
+G G +G+V + + VA+K +K + FL +A + E+K L++++
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+YI+ E ++Y NL D LR N + V+ + + Q+ +A+
Sbjct: 82 EPPFYIIT---------------EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 126
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSP 292
+L N IH DL N L+ + +K+ DFG S G ++F + +P
Sbjct: 127 YLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAP 182
Query: 293 EVLLGIPYDLAIDMWSLGCILVEMHT 318
E L + + D+W+ G +L E+ T
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 107/232 (46%), Gaps = 34/232 (14%)
Query: 116 KFLDRYEI-DSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLL-EI 171
+F D Y++ + ++G+G+ +V +L A+KII+ K+P ++++ EV++L +
Sbjct: 9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQC 67
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQ 229
+V + F LVFE + L + + +F + ++ Q
Sbjct: 68 QGHRNVLELIEFFEEEDRFY------LVFEKMRGGSILSHIHKRRHFNELEASVV---VQ 118
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKR-SAIKIVDF--GSSCQLGQ-------- 278
+ +AL FL I H DLKPENIL +P + S +KI DF GS +L
Sbjct: 119 DVASALDFLHNK--GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP 176
Query: 279 RIYQYIQSRFYRSPEVLLGIP-----YDLAIDMWSLGCILVEMHTGEPLFSG 325
+ S Y +PEV+ YD D+WSLG IL + +G P F G
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 107/232 (46%), Gaps = 34/232 (14%)
Query: 116 KFLDRYEI-DSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLL-EI 171
+F D Y++ + ++G+G+ +V +L A+KII+ K+P ++++ EV++L +
Sbjct: 9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQC 67
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNFRGVSLNLTRKFSQ 229
+V + F LVFE + L + + +F + ++ Q
Sbjct: 68 QGHRNVLELIEFFEEEDRFY------LVFEKMRGGSILSHIHKRRHFNELEASVV---VQ 118
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKR-SAIKIVDFG--SSCQLGQ-------- 278
+ +AL FL I H DLKPENIL +P + S +KI DFG S +L
Sbjct: 119 DVASALDFLHNK--GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTP 176
Query: 279 RIYQYIQSRFYRSPEVLLGIP-----YDLAIDMWSLGCILVEMHTGEPLFSG 325
+ S Y +PEV+ YD D+WSLG IL + +G P F G
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 117 FLDRYEIDS-LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKA 175
+D Y++ S ++G G G+V++ F+ Q A+K++++ +A+ EV+L
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL-----HW 65
Query: 176 DVNNTYYIVRL----KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +IVR+ + + R L +V E L L+ +++ + + + +
Sbjct: 66 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI-KIVDFGSSCQLGQRIYQYIQSRFY 289
+ A+ +L + +NI H D+KPEN+L + + +AI K+ DFG + +
Sbjct: 126 IGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET------------- 170
Query: 290 RSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLF 323
G YD + DMWSLG I+ + G P F
Sbjct: 171 ------TGEKYDKSCDMWSLGVIMYILLCGYPPF 198
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI--EVKLLEIMNK 174
F++ +++ +G+G+ G+V A + + VA+KI+ K+ I E+ + +++N
Sbjct: 4 FVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 175 ADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+V V+ H N L E S L+D + G+ ++F QL
Sbjct: 64 ENV------VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMA 115
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+++L + I H D+KPEN+LL +R +KI DFG + + + ++
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 289 YRSPEVLLGIPYDLA-IDMWSLGCILVEMHTGE 320
Y +PE+L + +D+WS G +L M GE
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR---IYQYIQSRFYRSPEVLLGIPY 300
++H DLKP N+ L + +K+ DFG + L +++ + +Y SPE + + Y
Sbjct: 136 TVLHRDLKPANVFL--DGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSY 193
Query: 301 DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVE 337
+ D+WSLGC+L E+ P F+ ++ + KI E
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 14/238 (5%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCH-VAIKIIKNKKPFLNQAQIEVKLLEIM 172
G + Y + +G G+FG+V K E H VA+KI+ +K + + K+ +
Sbjct: 11 GRVKIGHYILGDTLGVGTFGKV-KVGKHELTGHKVAVKILNRQK--IRSLDVVGKIRREI 67
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQL 231
+ +I++L + + + +V E +S L+D + N R + +R+ QQ+
Sbjct: 68 QNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI-CKNGR-LDEKESRRLFQQI 125
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFY 289
+ + + ++H DLKPEN+LL KI DFG S + G+ + S Y
Sbjct: 126 LSGVDYCH--RHMVVHRDLKPENVLL--DAHMNAKIADFGLSNMMSDGEFLRXSCGSPNY 181
Query: 290 RSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPPKHL 346
+PEV+ G Y +D+WS G IL + G F + KI + + P++L
Sbjct: 182 AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYL 239
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 42/269 (15%)
Query: 92 KKEKKLYNEGYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKI 151
KK ++ G D D+ I G+ + IG GSFG V K + VA+K+
Sbjct: 2 KKGHHHHHHGSRDAADDWEIPDGQ-----ITVGQRIGSGSFGTVYKG---KWHGDVAVKM 53
Query: 152 IKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRH-----FMWRN---HLCLVFELL 203
+ P Q Q N ++R RH FM + L +V +
Sbjct: 54 LNVTAPTPQQLQA------------FKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWC 101
Query: 204 -SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKR 262
+LY L + + + ++Q + +L +IIH DLK NI L +
Sbjct: 102 EGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNNIFL--HED 156
Query: 263 SAIKIVDFG-----SSCQLGQRIYQYIQSRFYRSPEVLL---GIPYDLAIDMWSLGCILV 314
+ +KI DFG S + Q S + +PEV+ PY D+++ G +L
Sbjct: 157 NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216
Query: 315 EMHTGEPLFSGSNEVDQMNKIVEVLGLPP 343
E+ TG+ +S N DQ+ ++V L P
Sbjct: 217 ELMTGQLPYSNINNRDQIIEMVGRGSLSP 245
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 105/249 (42%), Gaps = 26/249 (10%)
Query: 104 DDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQ 163
D + D+ I G+ + IG GSFG V K + VA+K++ P Q Q
Sbjct: 2 DSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQ 53
Query: 164 IEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLN 222
+ ++ K N + L + + L +V + +LY L + + +
Sbjct: 54 AFKNEVGVLRKTRHVN----ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMK 108
Query: 223 LTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-----SSCQLG 277
++Q + +L +IIH DLK NI L + + +KI DFG S
Sbjct: 109 KLIDIARQTARGMDYLHAK--SIIHRDLKSNNIFL--HEDNTVKIGDFGLATVKSRWSGS 164
Query: 278 QRIYQYIQSRFYRSPEVLL---GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNK 334
+ Q S + +PEV+ PY D+++ G +L E+ TG+ +S N DQ+ +
Sbjct: 165 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIE 224
Query: 335 IVEVLGLPP 343
+V L P
Sbjct: 225 MVGRGSLSP 233
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII-KNKKPFLNQAQIEVKLLEIMNKA 175
F D Y + IG GS+ + + A+K+I K+K+ + +I ++ + N
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPN-- 82
Query: 176 DVNNTYYIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNF--RGVSLNLTRKFSQQL 231
I+ LK + H+ LV EL+ L +LR F R S L +
Sbjct: 83 -------IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL-----HTI 130
Query: 232 CTALLFLSTPELNIIHCDLKPENILLC----NPKRSAIKIVDFGSSCQL----GQRIYQY 283
+ +L + ++H DLKP NIL NP+ ++I DFG + QL G +
Sbjct: 131 GKTVEYLHSQ--GVVHRDLKPSNILYVDESGNPE--CLRICDFGFAKQLRAENGLLMTPC 186
Query: 284 IQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTG-EPLFSGSNEV 329
+ F +PEVL YD D+WSLG +L M G P +G ++
Sbjct: 187 YTANFV-APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDT 232
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY---QYIQSRFYRSPEVLLGIPY 300
++H DLKP N+ L + +K+ DFG + L ++ + +Y SPE + + Y
Sbjct: 136 TVLHRDLKPANVFL--DGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSY 193
Query: 301 DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVE 337
+ D+WSLGC+L E+ P F+ ++ + KI E
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 53/258 (20%)
Query: 121 YEIDSLIGKGSFGQVVKA---FDLEEQCHVAIK-IIKNKKPFLNQAQIEVKLLEIMNKAD 176
++I+ IG+G+F V A + + +A+K +I P A E++ L + D
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAA--ELQCLTVAGGQD 80
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSYNLY-DLLRNTNFRGVSLNLTRKFSQQLCTAL 235
++ +K F +H+ + L + + D+L + +F+ V R++ L AL
Sbjct: 81 -----NVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEV-----REYMLNLFKAL 130
Query: 236 LFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG------------------------ 271
+ + I+H D+KP N L N + +VDFG
Sbjct: 131 KRIH--QFGIVHRDVKPSNFLY-NRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQER 187
Query: 272 ---SSCQLGQRIYQYIQSRF----YRSPEVLLGIP-YDLAIDMWSLGCILVEMHTGE-PL 322
+ C + Q + R +R+PEVL P AIDMWS G I + + +G P
Sbjct: 188 CSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
Query: 323 FSGSNEVDQMNKIVEVLG 340
+ S+++ + +I+ + G
Sbjct: 248 YKASDDLTALAQIMTIRG 265
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY---QYIQSRFYRSPEVLLGIPY 300
++H DLKP N+ L + +K+ DFG + L ++ + +Y SPE + + Y
Sbjct: 136 TVLHRDLKPANVFL--DGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSY 193
Query: 301 DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVE 337
+ D+WSLGC+L E+ P F+ ++ + KI E
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 117 FLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKII-KNKKPFLNQAQIEVKLLEIMNKA 175
F D Y + IG GS+ + + A+K+I K+K+ + +I ++ + N
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPN-- 82
Query: 176 DVNNTYYIVRLKRHFMWRNHLCLVFELLSYN--LYDLLRNTNF--RGVSLNLTRKFSQQL 231
I+ LK + H+ LV EL+ L +LR F R S L +
Sbjct: 83 -------IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL-----HTI 130
Query: 232 CTALLFLSTPELNIIHCDLKPENILLC----NPKRSAIKIVDFGSSCQL----GQRIYQY 283
+ +L + ++H DLKP NIL NP+ ++I DFG + QL G +
Sbjct: 131 GKTVEYLHSQ--GVVHRDLKPSNILYVDESGNPE--CLRICDFGFAKQLRAENGLLMTPC 186
Query: 284 IQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFS 324
+ F +PEVL YD D+WSLG +L M G F+
Sbjct: 187 YTANFV-APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFA 226
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 22/215 (10%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCH-VAIKIIKNKK----PFLNQAQIEVKL 168
G + Y + +G G+FG+V K + + H VA+KI+ +K + + + E++
Sbjct: 6 GRVKIGHYVLGDTLGVGTFGKV-KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN 64
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKF 227
L++ + Y ++ F +V E +S L+D + V R+
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFF------MVMEYVSGGELFDYI--CKHGRVEEMEARRL 116
Query: 228 SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQ 285
QQ+ +A+ + ++H DLKPEN+LL KI DFG S + G+ +
Sbjct: 117 FQQILSAVDYCHRH--MVVHRDLKPENVLL--DAHMNAKIADFGLSNMMSDGEFLRDSCG 172
Query: 286 SRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTG 319
S Y +PEV+ G Y +D+WS G IL + G
Sbjct: 173 SPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKI--IKNKKPFLNQAQIEVKLLEIMNKAD-V 177
+ + IG G+FG++ +L +VAIK+ IK++ P Q +E + + ++ + V
Sbjct: 6 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAP---QLHLEYRFYKQLSATEGV 62
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
YY ++ +V ELL +L DL + R +L + QL T + +
Sbjct: 63 PQVYYFGPXGKYN------AMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLITRMEY 115
Query: 238 LSTPELNIIHCDLKPENILLCNP---KRSAIKIVDFG 271
+ T L I+ D+KPEN L+ P ++ AI I+DFG
Sbjct: 116 VHTKSL--IYRDVKPENFLVGRPGTKRQHAIHIIDFG 150
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 22/215 (10%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCH-VAIKIIKNKK----PFLNQAQIEVKL 168
G + Y + +G G+FG+V K + + H VA+KI+ +K + + + E++
Sbjct: 6 GRVKIGHYVLGDTLGVGTFGKV-KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN 64
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKF 227
L++ + Y ++ F +V E +S L+D + V R+
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFF------MVMEYVSGGELFDYI--CKHGRVEEMEARRL 116
Query: 228 SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQ 285
QQ+ +A+ + ++H DLKPEN+LL KI DFG S + G+ +
Sbjct: 117 FQQILSAVDYCHRH--MVVHRDLKPENVLL--DAHMNAKIADFGLSNMMSDGEFLRTSCG 172
Query: 286 SRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTG 319
S Y +PEV+ G Y +D+WS G IL + G
Sbjct: 173 SPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV--NNTYYIV 184
+G+G++G V K + +A+K I+ Q ++ + L M D T+Y
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 185 RLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSL--NLTRKFSQQLCTALLFLSTPE 242
+ +W +C+ EL+ +L + +G ++ ++ K + + AL L + +
Sbjct: 119 LFREGDVW---ICM--ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-K 172
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQS--RFYRSPE----VLL 296
L++IH D+KP N+L+ +K+ DFG S L + + I + + Y +PE L
Sbjct: 173 LSVIHRDVKPSNVLIN--ALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELN 230
Query: 297 GIPYDLAIDMWSLGCILVEMHTGE-PLFSGSNEVDQMNKIVE 337
Y + D+WSLG ++E+ P S Q+ ++VE
Sbjct: 231 QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 18/229 (7%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK--PFLNQAQIEVKLLEIM 172
++ L YE+ IG G F +V A + VAIKI+ L + + E++ L+ +
Sbjct: 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL 65
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
+ Y+++ C EL Y + + +S TR +Q+
Sbjct: 66 RHQHICQLYHVLETANKIFMVLEYCPGGELFDYII-------SQDRLSEEETRVVFRQIV 118
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ-LGQRIYQY---IQSRF 288
+A+ ++ + H DLKPEN+L + +K++DFG + G + Y S
Sbjct: 119 SAVAYVHSQ--GYAHRDLKPENLLF--DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA 174
Query: 289 YRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIV 336
Y +PE++ G Y D+WS+G +L + G F N + KI+
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIM 223
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 27/202 (13%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
IG G FG V + L + VAIK I+ +++ F+ +A++ +KL +
Sbjct: 15 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFIEEAEVMMKL----------SHPK 63
Query: 183 IVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGV-SLNLTRKFSQQLCTALLFLST 240
+V+L + + +CLVFE + + L D LR RG+ + +C + +L
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLE- 120
Query: 241 PELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSPEVLL 296
E ++IH DL N L+ + IK+ DFG + L + ++F + SPEV
Sbjct: 121 -EASVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 177
Query: 297 GIPYDLAIDMWSLGCILVEMHT 318
Y D+WS G ++ E+ +
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFS 199
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 56/265 (21%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK--NKKPFLNQAQIEVKLLEIMN 173
++L +E +G+G FG V +A + + C+ AIK I+ N++ + EVK L +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 174 KADVNNTYYIVRLKRHFMWRN------------HLCLVFELL-SYNLYDLLRN-----TN 215
IVR ++ +N +L + +L NL D +
Sbjct: 62 HPG------IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER 115
Query: 216 FRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 275
R V L++ Q+ A+ FL + L +H DLKP NI +K+ DFG
Sbjct: 116 ERSVCLHIF----LQIAEAVEFLHSKGL--MHRDLKPSNIFFT--MDDVVKVGDFGLVTA 167
Query: 276 LGQ---------------RIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGE 320
+ Q R + ++ Y SPE + G Y +D++SLG IL E+
Sbjct: 168 MDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL---- 223
Query: 321 PLFSGSNEVDQMNKIVEV--LGLPP 343
L+ S +++++ + +V L PP
Sbjct: 224 -LYPFSTQMERVRTLTDVRNLKFPP 247
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 36/216 (16%)
Query: 124 DSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
+ ++G GS G VV + + +++ + F + A +E+KLL + YY
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYC 94
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-----QQLCTALLFL 238
F++ + EL + NL DL+ + N +L L ++++ +Q+ + + L
Sbjct: 95 SETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 239 STPELNIIHCDLKPENILLCNPKRSA-----------IKIVDFGSSCQL--GQRIYQY-- 283
+ L IIH DLKP+NIL+ R I I DFG +L GQ ++
Sbjct: 150 HS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 284 ---IQSRFYRSPEVL---LGIPYDLAIDMWSLGCIL 313
+ +R+PE+L +ID++S+GC+
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 36/216 (16%)
Query: 124 DSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
+ ++G GS G VV + + +++ + F + A +E+KLL + YY
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYC 94
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-----QQLCTALLFL 238
F++ + EL + NL DL+ + N +L L ++++ +Q+ + + L
Sbjct: 95 SETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 239 STPELNIIHCDLKPENILLCNPKRSA-----------IKIVDFGSSCQL--GQRIYQY-- 283
+ L IIH DLKP+NIL+ R I I DFG +L GQ ++
Sbjct: 150 HS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 284 ---IQSRFYRSPEVL---LGIPYDLAIDMWSLGCIL 313
+ +R+PE+L +ID++S+GC+
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 39/227 (17%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL--------- 168
L++Y + IGKGS+G V A++ + + A+K++ KK + QA +
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKK-LIRQAGFPRRPPPRGTRPAP 70
Query: 169 ----------------LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLR 212
+ I+ K D N +V + +HL +VFEL+ N ++
Sbjct: 71 GGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPN-EDHLYMVFELV--NQGPVME 127
Query: 213 NTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGS 272
+ +S + R + Q L + +L + IIH D+KP N+L+ + IKI DFG
Sbjct: 128 VPTLKPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLVG--EDGHIKIADFGV 183
Query: 273 SCQLGQR---IYQYIQSRFYRSPEVL---LGIPYDLAIDMWSLGCIL 313
S + + + + + +PE L I A+D+W++G L
Sbjct: 184 SNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 114/266 (42%), Gaps = 60/266 (22%)
Query: 106 NHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQ---CHVAIKIIKN------KK 156
DY IQ +R E+ IG+G FG V + + + VAIK KN ++
Sbjct: 382 TRDYEIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE 436
Query: 157 PFLNQA----QIE----VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLY 208
FL +A Q + VKL+ ++ + N +I+ LC + EL S+
Sbjct: 437 KFLQEALTMRQFDHPHIVKLIGVITE----NPVWIIM---------ELCTLGELRSF--- 480
Query: 209 DLLRNTNFRGVSLNLTR--KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIK 266
R SL+L ++ QL TAL +L + +H D+ N+L+ + +K
Sbjct: 481 -----LQVRKFSLDLASLILYAYQLSTALAYLESKRF--VHRDIAARNVLVSS--NDCVK 531
Query: 267 IVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVE--MHTG 319
+ DFG S + Y Y S+ + +PE + + A D+W G + E MH
Sbjct: 532 LGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 590
Query: 320 EPLFSGSNEVDQMNKIV--EVLGLPP 343
+P F G D + +I E L +PP
Sbjct: 591 KP-FQGVKNNDVIGRIENGERLPMPP 615
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 34/239 (14%)
Query: 123 IDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEIMN 173
ID ++G G FG+V +++ VAIK +K ++ FL +A I M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI-------MG 101
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQLC 232
+ D N I+RL+ + +V E + D LR + + + L + +
Sbjct: 102 QFDHPN---IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIA 157
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF---- 288
+ + +LS ++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 158 SGMKYLS--DMGFVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 289 --YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLPP 343
+ SPE + + A D+WS G +L E M GE P + SN+ D + + E LPP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPP 271
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 119/278 (42%), Gaps = 61/278 (21%)
Query: 95 KKLYNEG-YDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQ---CHVAIK 150
+ LY +G DY IQ +R E+ IG+G FG V + + + VAIK
Sbjct: 18 ENLYFQGAMGSSTRDYEIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIK 72
Query: 151 IIKN------KKPFLNQA----QIE----VKLLEIMNKADVNNTYYIVRLKRHFMWRNHL 196
KN ++ FL +A Q + VKL+ ++ + N +I+ L
Sbjct: 73 TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----NPVWIIM---------EL 119
Query: 197 CLVFELLSYNLYDLLRNTNFRGVSLNLTR--KFSQQLCTALLFLSTPELNIIHCDLKPEN 254
C + EL S+ R SL+L ++ QL TAL +L + +H D+ N
Sbjct: 120 CTLGELRSF--------LQVRKYSLDLASLILYAYQLSTALAYLESKRF--VHRDIAARN 169
Query: 255 ILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSL 309
+L+ + +K+ DFG S + Y Y S+ + +PE + + A D+W
Sbjct: 170 VLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMF 226
Query: 310 GCILVE--MHTGEPLFSGSNEVDQMNKI--VEVLGLPP 343
G + E MH +P F G D + +I E L +PP
Sbjct: 227 GVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 263
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 34/239 (14%)
Query: 123 IDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEIMN 173
ID ++G G FG+V +++ VAIK +K ++ FL +A I M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI-------MG 101
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQLC 232
+ D N I+RL+ + +V E + D LR + + + L + +
Sbjct: 102 QFDHPN---IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIA 157
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF---- 288
+ + +LS ++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 158 SGMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 289 --YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLPP 343
+ SPE + + A D+WS G +L E M GE P + SN+ D + + E LPP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPP 271
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 34/239 (14%)
Query: 123 IDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEIMN 173
ID ++G G FG+V +++ VAIK +K ++ FL +A I M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI-------MG 101
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQLC 232
+ D N I+RL+ + +V E + D LR + + + L + +
Sbjct: 102 QFDHPN---IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIA 157
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF---- 288
+ + +LS ++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 158 SGMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 289 --YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLPP 343
+ SPE + + A D+WS G +L E M GE P + SN+ D + + E LPP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPP 271
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 109/260 (41%), Gaps = 50/260 (19%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV 177
+D EI+ LIG G FGQV KA + + +IK K +A+ EVK L ++ ++
Sbjct: 11 MDFKEIE-LIGSGGFGQVFKA---KHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNI 66
Query: 178 ---NNTY----YIVRLKRHFMWRNHLCLVFELLSYNLYDLLRN--TNFRGVSLN--LTRK 226
N + Y R+ +F + + L RG L+ L +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQY 283
+Q+ + ++ + +L I+ DLKP NI L + K+ +KI DFG L G+R
Sbjct: 127 LFEQITKGVDYIHSKKL--INRDLKPSNIFLVDTKQ--VKIGDFGLVTSLKNDGKRXRSK 182
Query: 284 IQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGLPP 343
R Y SPE + Y +D+++LG IL E+
Sbjct: 183 GTLR-YMSPEQISSQDYGKEVDLYALGLILAELL-------------------------- 215
Query: 344 KHLLDGAHKTRKYFDKMPDG 363
H+ D A +T K+F + DG
Sbjct: 216 -HVCDTAFETSKFFTDLRDG 234
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 34/239 (14%)
Query: 123 IDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEIMN 173
ID ++G G FG+V +++ VAIK +K ++ FL +A I M
Sbjct: 47 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI-------MG 99
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQLC 232
+ D N I+RL+ + +V E + D LR + + + L + +
Sbjct: 100 QFDHPN---IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIA 155
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF---- 288
+ + +LS ++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 156 SGMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Query: 289 --YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLPP 343
+ SPE + + A D+WS G +L E M GE P + SN+ D + + E LPP
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPP 269
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 34/239 (14%)
Query: 123 IDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEIMN 173
ID ++G G FG+V +++ VAIK +K ++ FL +A I M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI-------MG 101
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQLC 232
+ D N I+RL+ + +V E + D LR + + + L + +
Sbjct: 102 QFDHPN---IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIA 157
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF---- 288
+ + +LS ++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 158 SGMKYLS--DMGAVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 289 --YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLPP 343
+ SPE + + A D+WS G +L E M GE P + SN+ D + + E LPP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPP 271
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 34/239 (14%)
Query: 123 IDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEIMN 173
ID ++G G FG+V +++ VAIK +K ++ FL +A I M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI-------MG 101
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQLC 232
+ D N I+RL+ + +V E + D LR + + + L + +
Sbjct: 102 QFDHPN---IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIA 157
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF---- 288
+ + +LS ++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 158 SGMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 289 --YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLPP 343
+ SPE + + A D+WS G +L E M GE P + SN+ D + + E LPP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPP 271
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 34/239 (14%)
Query: 123 IDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEIMN 173
ID ++G G FG+V +++ VAIK +K ++ FL +A I M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI-------MG 101
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQLC 232
+ D N I+RL+ + +V E + D LR + + + L + +
Sbjct: 102 QFDHPN---IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIA 157
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF---- 288
+ + +LS ++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 158 SGMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 289 --YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLPP 343
+ SPE + + A D+WS G +L E M GE P + SN+ D + + E LPP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPP 271
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 27/202 (13%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
IG G FG V + L + VAIK IK ++ F+ +A++ +KL +
Sbjct: 35 IGSGQFGLVHLGYWLNKD-KVAIKTIKEGSMSEDDFIEEAEVMMKL----------SHPK 83
Query: 183 IVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGV-SLNLTRKFSQQLCTALLFLST 240
+V+L + + +CLVFE + + L D LR RG+ + +C + +L
Sbjct: 84 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLE- 140
Query: 241 PELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSPEVLL 296
E +IH DL N L+ + IK+ DFG + L + ++F + SPEV
Sbjct: 141 -EACVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 197
Query: 297 GIPYDLAIDMWSLGCILVEMHT 318
Y D+WS G ++ E+ +
Sbjct: 198 FSRYSSKSDVWSFGVLMWEVFS 219
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 34/239 (14%)
Query: 123 IDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEIMN 173
ID ++G G FG+V +++ VAIK +K ++ FL +A I M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI-------MG 101
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQLC 232
+ D N I+RL+ + +V E + D LR + + + L + +
Sbjct: 102 QFDHPN---IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIA 157
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF---- 288
+ + +LS ++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 158 SGMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 289 --YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLPP 343
+ SPE + + A D+WS G +L E M GE P + SN+ D + + E LPP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPP 271
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 275 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 329
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 330 VVS-------EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 380
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 381 RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 438
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 439 GRFTIKSDVWSFGILLTELTT 459
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 60/266 (22%)
Query: 106 NHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQ---CHVAIKIIKN------KK 156
DY IQ +R E+ IG+G FG V + + + VAIK KN ++
Sbjct: 382 TRDYEIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE 436
Query: 157 PFLNQA----QIE----VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLY 208
FL +A Q + VKL+ ++ + N +I+ LC + EL S+
Sbjct: 437 KFLQEALTMRQFDHPHIVKLIGVITE----NPVWIIM---------ELCTLGELRSF--- 480
Query: 209 DLLRNTNFRGVSLNLTR--KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIK 266
R SL+L ++ QL TAL +L + +H D+ N+L+ +K
Sbjct: 481 -----LQVRKFSLDLASLILYAYQLSTALAYLESKRF--VHRDIAARNVLV--SATDCVK 531
Query: 267 IVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVE--MHTG 319
+ DFG S + Y Y S+ + +PE + + A D+W G + E MH
Sbjct: 532 LGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 590
Query: 320 EPLFSGSNEVDQMNKIV--EVLGLPP 343
+P F G D + +I E L +PP
Sbjct: 591 KP-FQGVKNNDVIGRIENGERLPMPP 615
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV--NNTYYIV 184
+G+G++G V K + +A+K I+ Q ++ + L M D T+Y
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 185 RLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSL--NLTRKFSQQLCTALLFLSTPE 242
+ +W +C+ EL+ +L + +G ++ ++ K + + AL L + +
Sbjct: 75 LFREGDVW---ICM--ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-K 128
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQS--RFYRSPE----VLL 296
L++IH D+KP N+L+ +K+ DFG S L + + I + + Y +PE L
Sbjct: 129 LSVIHRDVKPSNVLI--NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELN 186
Query: 297 GIPYDLAIDMWSLGCILVEMHTGE-PLFSGSNEVDQMNKIVE 337
Y + D+WSLG ++E+ P S Q+ ++VE
Sbjct: 187 QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 228
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 27/202 (13%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
IG G FG V + L + VAIK I+ +++ F+ +A++ +KL +
Sbjct: 15 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFIEEAEVMMKL----------SHPK 63
Query: 183 IVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGV-SLNLTRKFSQQLCTALLFLST 240
+V+L + + +CLVFE + + L D LR RG+ + +C + +L
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLE- 120
Query: 241 PELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSPEVLL 296
E +IH DL N L+ + IK+ DFG + L + ++F + SPEV
Sbjct: 121 -EACVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 177
Query: 297 GIPYDLAIDMWSLGCILVEMHT 318
Y D+WS G ++ E+ +
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFS 199
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
+GKG F + + D + + A KI+ K L Q E +EI + + + +V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQH-VVG 85
Query: 186 LKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN 244
F + + +V EL +L +L + + ++ R + +Q+ +L
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLH--RNR 141
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYRSPEVLLGIPYD 301
+IH DLK N+ L + +KI DFG + ++ G+R + Y +PEVL +
Sbjct: 142 VIHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 199
Query: 302 LAIDMWSLGCILVEMHTGEPLFSGS 326
+D+WS+GCI+ + G+P F S
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 27/202 (13%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
IG G FG V + L + VAIK I+ +++ F+ +A++ +KL +
Sbjct: 18 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFIEEAEVMMKL----------SHPK 66
Query: 183 IVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGV-SLNLTRKFSQQLCTALLFLST 240
+V+L + + +CLVFE + + L D LR RG+ + +C + +L
Sbjct: 67 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLE- 123
Query: 241 PELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSPEVLL 296
E +IH DL N L+ + IK+ DFG + L + ++F + SPEV
Sbjct: 124 -EACVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 180
Query: 297 GIPYDLAIDMWSLGCILVEMHT 318
Y D+WS G ++ E+ +
Sbjct: 181 FSRYSSKSDVWSFGVLMWEVFS 202
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 30/243 (12%)
Query: 101 GYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN 160
G D + D+ I G+ + IG GSFG V K + VA+K++ P
Sbjct: 23 GRRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQ 74
Query: 161 QAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLR--NTNFR 217
Q Q + ++ K N + L + + L +V + +LY L T F
Sbjct: 75 QLQAFKNEVGVLRKTRHVN----ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFE 130
Query: 218 GVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-----S 272
+ L ++Q + +L +IIH DLK NI L + +KI DFG S
Sbjct: 131 MIKLI---DIARQTAQGMDYLHAK--SIIHRDLKSNNIFL--HEDLTVKIGDFGLATEKS 183
Query: 273 SCQLGQRIYQYIQSRFYRSPEVLL---GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+ Q S + +PEV+ PY D+++ G +L E+ TG+ +S N
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
Query: 330 DQM 332
DQ+
Sbjct: 244 DQI 246
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 30/243 (12%)
Query: 101 GYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN 160
G D + D+ I G+ + IG GSFG V K + VA+K++ P
Sbjct: 23 GRRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQ 74
Query: 161 QAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLR--NTNFR 217
Q Q + ++ K N + L + + L +V + +LY L T F
Sbjct: 75 QLQAFKNEVGVLRKTRHVN----ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFE 130
Query: 218 GVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-----S 272
+ L ++Q + +L +IIH DLK NI L + +KI DFG S
Sbjct: 131 MIKLI---DIARQTAQGMDYLHAK--SIIHRDLKSNNIFL--HEDLTVKIGDFGLATVKS 183
Query: 273 SCQLGQRIYQYIQSRFYRSPEVLL---GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+ Q S + +PEV+ PY D+++ G +L E+ TG+ +S N
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
Query: 330 DQM 332
DQ+
Sbjct: 244 DQI 246
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 27/202 (13%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
IG G FG V + L + VAIK I+ +++ F+ +A++ +KL +
Sbjct: 13 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFIEEAEVMMKL----------SHPK 61
Query: 183 IVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGV-SLNLTRKFSQQLCTALLFLST 240
+V+L + + +CLVFE + + L D LR RG+ + +C + +L
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLE- 118
Query: 241 PELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSPEVLL 296
E +IH DL N L+ + IK+ DFG + L + ++F + SPEV
Sbjct: 119 -EACVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 175
Query: 297 GIPYDLAIDMWSLGCILVEMHT 318
Y D+WS G ++ E+ +
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFS 197
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 28/228 (12%)
Query: 116 KFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFL---NQAQI--EVKLLE 170
K + +Y + L+G+GS+G+V + D E C A+KI+K KK +A + E++LL
Sbjct: 2 KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLR 61
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
+ +V ++ + + + +V E + ++L + + + + Q
Sbjct: 62 RLRHKNVIQLVDVLYNEE----KQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQ 117
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNP---KRSAIKIVD----FGS--SCQLGQRIY 281
L L +L + I+H D+KP N+LL K SA+ + + F + +C+ Q
Sbjct: 118 LIDGLEYLHS--QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ--- 172
Query: 282 QYIQSRFYRSPEVLLGIPY--DLAIDMWSLGCILVEMHTGEPLFSGSN 327
S ++ PE+ G+ +D+WS G L + TG F G N
Sbjct: 173 ---GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 40/220 (18%)
Query: 124 DSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
+ ++G GS G VV + + VA+K + F + A +E+KLL + YY
Sbjct: 20 EKILGYGSSGTVVFQGSFQGR-PVAVK--RMLIDFCDIALMEIKLLTESDDHPNVIRYYC 76
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-----QQLCTALLFL 238
F++ + EL + NL DL+ + N +L L ++++ +Q+ + + L
Sbjct: 77 SETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 239 STPELNIIHCDLKPENILLCNPKRSA-----------IKIVDFGSSCQL--GQRIYQY-- 283
+ L IIH DLKP+NIL+ R I I DFG +L GQ ++
Sbjct: 132 HS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 189
Query: 284 ---IQSRFYRSPEVL-----LGIPYDL--AIDMWSLGCIL 313
+ +R+PE+L L L +ID++S+GC+
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 30/243 (12%)
Query: 101 GYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN 160
G D + D+ I G+ + IG GSFG V K + VA+K++ P
Sbjct: 22 GRRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQ 73
Query: 161 QAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLR--NTNFR 217
Q Q + ++ K N + L + + L +V + +LY L T F
Sbjct: 74 QLQAFKNEVGVLRKTRHVN----ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFE 129
Query: 218 GVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-----S 272
+ L ++Q + +L +IIH DLK NI L + +KI DFG S
Sbjct: 130 MIKLI---DIARQTAQGMDYLHAK--SIIHRDLKSNNIFL--HEDLTVKIGDFGLATVKS 182
Query: 273 SCQLGQRIYQYIQSRFYRSPEVLL---GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+ Q S + +PEV+ PY D+++ G +L E+ TG+ +S N
Sbjct: 183 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 242
Query: 330 DQM 332
DQ+
Sbjct: 243 DQI 245
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
+GKG F + + D + + A KI+ K L Q E +EI + + + +V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQH-VVG 105
Query: 186 LKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN 244
F + + +V EL +L +L + + ++ R + +Q+ +L
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLH--RNR 161
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYRSPEVLLGIPYD 301
+IH DLK N+ L + +KI DFG + ++ G+R + Y +PEVL +
Sbjct: 162 VIHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 302 LAIDMWSLGCILVEMHTGEPLFSGS 326
+D+WS+GCI+ + G+P F S
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 30/243 (12%)
Query: 101 GYDDDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLN 160
G D + D+ I G+ + IG GSFG V K + VA+K++ P
Sbjct: 15 GRRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQ 66
Query: 161 QAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLR--NTNFR 217
Q Q + ++ K N + L + + L +V + +LY L T F
Sbjct: 67 QLQAFKNEVGVLRKTRHVN----ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFE 122
Query: 218 GVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-----S 272
+ L ++Q + +L +IIH DLK NI L + +KI DFG S
Sbjct: 123 MIKLI---DIARQTAQGMDYLHAK--SIIHRDLKSNNIFL--HEDLTVKIGDFGLATEKS 175
Query: 273 SCQLGQRIYQYIQSRFYRSPEVLL---GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+ Q S + +PEV+ PY D+++ G +L E+ TG+ +S N
Sbjct: 176 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 235
Query: 330 DQM 332
DQ+
Sbjct: 236 DQI 238
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
+GKG F + + D + + A KI+ K L Q E +EI + + + +V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQH-VVG 81
Query: 186 LKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN 244
F + + +V EL +L +L + + ++ R + +Q+ +L
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLH--RNR 137
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYRSPEVLLGIPYD 301
+IH DLK N+ L + +KI DFG + ++ G+R + Y +PEVL +
Sbjct: 138 VIHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 302 LAIDMWSLGCILVEMHTGEPLFSGS 326
+D+WS+GCI+ + G+P F S
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
+GKG F + + D + + A KI+ K L Q E +EI + + + +V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQH-VVG 81
Query: 186 LKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN 244
F + + +V EL +L +L + + ++ R + +Q+ +L
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLH--RNR 137
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYRSPEVLLGIPYD 301
+IH DLK N+ L + +KI DFG + ++ G+R + Y +PEVL +
Sbjct: 138 VIHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 302 LAIDMWSLGCILVEMHTGEPLFSGS 326
+D+WS+GCI+ + G+P F S
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 60/267 (22%)
Query: 105 DNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQ---CHVAIKIIKN------K 155
DY IQ +R E+ IG+G FG V + + + VAIK KN +
Sbjct: 3 STRDYEIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR 57
Query: 156 KPFLNQA----QIE----VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNL 207
+ FL +A Q + VKL+ ++ + N +I+ LC + EL S+
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVITE----NPVWIIM---------ELCTLGELRSF-- 102
Query: 208 YDLLRNTNFRGVSLNLTR--KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI 265
R SL+L ++ QL TAL +L + +H D+ N+L+ + +
Sbjct: 103 ------LQVRKYSLDLASLILYAYQLSTALAYLESKRF--VHRDIAARNVLVSS--NDCV 152
Query: 266 KIVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVE--MHT 318
K+ DFG S + Y Y S+ + +PE + + A D+W G + E MH
Sbjct: 153 KLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 211
Query: 319 GEPLFSGSNEVDQMNKIV--EVLGLPP 343
+P F G D + +I E L +PP
Sbjct: 212 VKP-FQGVKNNDVIGRIENGERLPMPP 237
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 60/267 (22%)
Query: 105 DNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQ---CHVAIKIIKN------K 155
DY IQ +R E+ IG+G FG V + + + VAIK KN +
Sbjct: 4 STRDYEIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR 58
Query: 156 KPFLNQA----QIE----VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNL 207
+ FL +A Q + VKL+ ++ + N +I+ LC + EL S+
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVITE----NPVWIIM---------ELCTLGELRSF-- 103
Query: 208 YDLLRNTNFRGVSLNLTR--KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI 265
R SL+L ++ QL TAL +L + +H D+ N+L+ + +
Sbjct: 104 ------LQVRKYSLDLASLILYAYQLSTALAYLESKRF--VHRDIAARNVLVSS--NDCV 153
Query: 266 KIVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVE--MHT 318
K+ DFG S + Y Y S+ + +PE + + A D+W G + E MH
Sbjct: 154 KLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 212
Query: 319 GEPLFSGSNEVDQMNKIV--EVLGLPP 343
+P F G D + +I E L +PP
Sbjct: 213 VKP-FQGVKNNDVIGRIENGERLPMPP 238
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 29/185 (15%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKI--IKNKKPFLNQAQIEVKLLEIMNKADVN 178
Y++ IG+GSFG + + +L VAIK ++ P L KLL +
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLL--AGCTGIP 68
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFL 238
N YY + H + LV +LL +L DLL + R S+ ++Q+ +
Sbjct: 69 NVYYFGQEGLHNV------LVIDLLGPSLEDLL-DLCGRKFSVKTVAMAAKQMLARV--Q 119
Query: 239 STPELNIIHCDLKPENILLCNPKR---SAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVL 295
S E ++++ D+KP+N L+ P + I +VDFG +FYR P
Sbjct: 120 SIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG-------------MVKFYRDPVTK 166
Query: 296 LGIPY 300
IPY
Sbjct: 167 QHIPY 171
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
+GKG F + + D + + A KI+ K L Q E +EI + + + +V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQH-VVG 103
Query: 186 LKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN 244
F + + +V EL +L +L + + ++ R + +Q+ +L
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLH--RNR 159
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYRSPEVLLGIPYD 301
+IH DLK N+ L + +KI DFG + ++ G+R + Y +PEVL +
Sbjct: 160 VIHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 302 LAIDMWSLGCILVEMHTGEPLFSGS 326
+D+WS+GCI+ + G+P F S
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 60/268 (22%)
Query: 104 DDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQ---CHVAIKIIKN------ 154
DY IQ +R E+ IG+G FG V + + + VAIK KN
Sbjct: 5 SSTRDYEIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV 59
Query: 155 KKPFLNQA----QIE----VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYN 206
++ FL +A Q + VKL+ ++ + N +I+ LC + EL S+
Sbjct: 60 REKFLQEALTMRQFDHPHIVKLIGVITE----NPVWIIM---------ELCTLGELRSF- 105
Query: 207 LYDLLRNTNFRGVSLNLTR--KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSA 264
R SL+L ++ QL TAL +L + +H D+ N+L+ +
Sbjct: 106 -------LQVRKYSLDLASLILYAYQLSTALAYLESKRF--VHRDIAARNVLVSS--NDC 154
Query: 265 IKIVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVE--MH 317
+K+ DFG S + Y Y S+ + +PE + + A D+W G + E MH
Sbjct: 155 VKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH 213
Query: 318 TGEPLFSGSNEVDQMNKI--VEVLGLPP 343
+P F G D + +I E L +PP
Sbjct: 214 GVKP-FQGVKNNDVIGRIENGERLPMPP 240
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKN---KKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IGKG FG V+ D VA+K IKN + FL +A + +L ++ +
Sbjct: 20 IGKGEFGDVMLG-DYRGN-KVAVKCIKNDATAQAFLAEASVMTQL---------RHSNLV 68
Query: 184 VRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
L + L +V E ++ +L D LR+ + + KFS +C A+ +L
Sbjct: 69 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 127
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDL 302
N +H DL N+L+ + + K+ DFG + + + +PE L +
Sbjct: 128 -NFVHRDLAARNVLV--SEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFST 184
Query: 303 AIDMWSLGCILVEMHT 318
D+WS G +L E+++
Sbjct: 185 KSDVWSFGILLWEIYS 200
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 29/185 (15%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKI--IKNKKPFLNQAQIEVKLLEIMNKADVN 178
Y++ IG+GSFG + + +L VAIK ++ P L KLL +
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLL--AGCTGIP 69
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFL 238
N YY + H + LV +LL +L DLL + R S+ ++Q+ +
Sbjct: 70 NVYYFGQEGLHNV------LVIDLLGPSLEDLL-DLCGRKFSVKTVAMAAKQMLARV--Q 120
Query: 239 STPELNIIHCDLKPENILLCNPKR---SAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVL 295
S E ++++ D+KP+N L+ P + I +VDFG +FYR P
Sbjct: 121 SIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG-------------MVKFYRDPVTK 167
Query: 296 LGIPY 300
IPY
Sbjct: 168 QHIPY 172
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 40/220 (18%)
Query: 124 DSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
+ ++G GS G VV + + VA+K + F + A +E+KLL + YY
Sbjct: 20 EKILGYGSSGTVVFQGSFQGR-PVAVK--RMLIDFCDIALMEIKLLTESDDHPNVIRYYC 76
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS-----QQLCTALLFL 238
F++ + EL + NL DL+ + N +L L ++++ +Q+ + + L
Sbjct: 77 SETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 239 STPELNIIHCDLKPENILLCNPKRSA-----------IKIVDFGSSCQL--GQRIYQY-- 283
+ L IIH DLKP+NIL+ R I I DFG +L GQ ++
Sbjct: 132 HS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNL 189
Query: 284 ---IQSRFYRSPEVL-----LGIPYDL--AIDMWSLGCIL 313
+ +R+PE+L L L +ID++S+GC+
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 34/239 (14%)
Query: 123 IDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEIMN 173
ID ++G G FG+V +++ VAIK +K ++ FL +A I M
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI-------MG 89
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQLC 232
+ D N I+RL+ + +V E + D LR + + + L + +
Sbjct: 90 QFDHPN---IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIA 145
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF---- 288
+ + +LS ++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 146 SGMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 289 --YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLPP 343
+ SPE + + A D+WS G +L E M GE P + SN+ D + + E LPP
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPP 259
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 34/239 (14%)
Query: 123 IDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEIMN 173
ID ++G G FG+V +++ VAIK +K ++ FL +A I M
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI-------MG 72
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQLC 232
+ D N I+RL+ + +V E + D LR + + + L + +
Sbjct: 73 QFDHPN---IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIA 128
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF---- 288
+ + +LS ++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 129 SGMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 289 --YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLPP 343
+ SPE + + A D+WS G +L E M GE P + SN+ D + + E LPP
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPP 242
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKI--IKNKKPFLNQAQIEVKLLEIMNKAD-V 177
+ + IG G+FG++ +L +VAIK+ +K++ P Q +E + + + D +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP---QLHLEYRFYKQLGSGDGI 67
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
YY ++ +V ELL +L DL + R SL + QL + + +
Sbjct: 68 PQVYYFGPCGKYN------AMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEY 120
Query: 238 LSTPELNIIHCDLKPENILLCNP---KRSAIKIVDFG 271
+ + N+I+ D+KPEN L+ P + I I+DFG
Sbjct: 121 VHSK--NLIYRDVKPENFLIGRPGNKTQQVIHIIDFG 155
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 60/267 (22%)
Query: 105 DNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQ---CHVAIKIIKN------K 155
DY IQ +R E+ IG+G FG V + + + VAIK KN +
Sbjct: 1 STRDYEIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR 55
Query: 156 KPFLNQA----QIE----VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNL 207
+ FL +A Q + VKL+ ++ + N +I+ LC + EL S+
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITE----NPVWIIM---------ELCTLGELRSF-- 100
Query: 208 YDLLRNTNFRGVSLNLTR--KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI 265
R SL+L ++ QL TAL +L + +H D+ N+L+ + +
Sbjct: 101 ------LQVRKYSLDLASLILYAYQLSTALAYLESKRF--VHRDIAARNVLVSS--NDCV 150
Query: 266 KIVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVE--MHT 318
K+ DFG S + Y Y S+ + +PE + + A D+W G + E MH
Sbjct: 151 KLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 209
Query: 319 GEPLFSGSNEVDQMNKIV--EVLGLPP 343
+P F G D + +I E L +PP
Sbjct: 210 VKP-FQGVKNNDVIGRIENGERLPMPP 235
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 34/239 (14%)
Query: 123 IDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEIMN 173
ID ++G G FG+V +++ VAIK +K ++ FL +A I M
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI-------MG 72
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQLC 232
+ D N I+RL+ + +V E + D LR + + + L + +
Sbjct: 73 QFDHPN---IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIA 128
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF---- 288
+ + +LS ++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 129 SGMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 289 --YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLPP 343
+ SPE + + A D+WS G +L E M GE P + SN+ D + + E LPP
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPP 242
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 60/267 (22%)
Query: 105 DNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQ---CHVAIKIIKN------K 155
DY IQ +R E+ IG+G FG V + + + VAIK KN +
Sbjct: 1 STRDYEIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR 55
Query: 156 KPFLNQA----QIE----VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNL 207
+ FL +A Q + VKL+ ++ + N +I+ LC + EL S+
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITE----NPVWIIM---------ELCTLGELRSF-- 100
Query: 208 YDLLRNTNFRGVSLNLTR--KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI 265
R SL+L ++ QL TAL +L + +H D+ N+L+ + +
Sbjct: 101 ------LQVRKYSLDLASLILYAYQLSTALAYLESKRF--VHRDIAARNVLVSS--NDCV 150
Query: 266 KIVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVE--MHT 318
K+ DFG S + Y Y S+ + +PE + + A D+W G + E MH
Sbjct: 151 KLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 209
Query: 319 GEPLFSGSNEVDQMNKIV--EVLGLPP 343
+P F G D + +I E L +PP
Sbjct: 210 VKP-FQGVKNNDVIGRIENGERLPMPP 235
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 37/152 (24%)
Query: 217 RGVSLN--LTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSC 274
RG L+ L + +Q+ + ++ + +L IH DLKP NI L + K+ +KI DFG
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSKKL--IHRDLKPSNIFLVDTKQ--VKIGDFGLVT 184
Query: 275 QL---GQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQ 331
L G+R R Y SPE + Y +D+++LG IL E+
Sbjct: 185 SLKNDGKRTRSKGTLR-YMSPEQISSQDYGKEVDLYALGLILAELL-------------- 229
Query: 332 MNKIVEVLGLPPKHLLDGAHKTRKYFDKMPDG 363
H+ D A +T K+F + DG
Sbjct: 230 -------------HVCDTAFETSKFFTDLRDG 248
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 42/243 (17%)
Query: 123 IDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEIMN 173
ID ++G G FG+V +++ VAIK +K ++ FL +A I M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI-------MG 101
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQLC 232
+ D N I+RL+ + +V E + D LR + + + L + +
Sbjct: 102 QFDHPN---IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIA 157
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF---- 288
+ + +LS ++ +H DL NIL+ + K+ DFG LG+ + ++ +
Sbjct: 158 SGMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFG----LGRVLEDDPEAAYTTRG 209
Query: 289 ------YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLG 340
+ SPE + + A D+WS G +L E M GE P + SN+ D + + E
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYR 268
Query: 341 LPP 343
LPP
Sbjct: 269 LPP 271
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 114/264 (43%), Gaps = 60/264 (22%)
Query: 108 DYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQ---CHVAIKIIKN------KKPF 158
DY IQ +R E+ IG+G FG V + + + VAIK KN ++ F
Sbjct: 1 DYEIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 55
Query: 159 LNQA----QIE----VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDL 210
L +A Q + VKL+ ++ + N +I+ LC + EL S+
Sbjct: 56 LQEALTMRQFDHPHIVKLIGVITE----NPVWIIM---------ELCTLGELRSF----- 97
Query: 211 LRNTNFRGVSLNLTR--KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIV 268
R SL+L ++ QL TAL +L + +H D+ N+L+ + +K+
Sbjct: 98 ---LQVRKYSLDLASLILYAYQLSTALAYLESKRF--VHRDIAARNVLVSS--NDCVKLG 150
Query: 269 DFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVE--MHTGEP 321
DFG S + Y Y S+ + +PE + + A D+W G + E MH +P
Sbjct: 151 DFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 209
Query: 322 LFSGSNEVDQMNKIV--EVLGLPP 343
F G D + +I E L +PP
Sbjct: 210 -FQGVKNNDVIGRIENGERLPMPP 232
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 113/267 (42%), Gaps = 60/267 (22%)
Query: 105 DNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQ---CHVAIKIIKN------K 155
DY IQ +R E+ IG+G FG V + + + VAIK KN +
Sbjct: 1 STRDYEIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR 55
Query: 156 KPFLNQA----QIE----VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNL 207
+ FL +A Q + VKL+ ++ + N +I+ LC + EL S+
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITE----NPVWIIM---------ELCTLGELRSF-- 100
Query: 208 YDLLRNTNFRGVSLNLTR--KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAI 265
R SL+L ++ QL TAL +L + +H D+ N+L+ +
Sbjct: 101 ------LQVRKFSLDLASLILYAYQLSTALAYLESKRF--VHRDIAARNVLV--SATDCV 150
Query: 266 KIVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVE--MHT 318
K+ DFG S + Y Y S+ + +PE + + A D+W G + E MH
Sbjct: 151 KLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 209
Query: 319 GEPLFSGSNEVDQMNKIV--EVLGLPP 343
+P F G D + +I E L +PP
Sbjct: 210 VKP-FQGVKNNDVIGRIENGERLPMPP 235
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 34/239 (14%)
Query: 123 IDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEIMN 173
ID ++G G FG+V +++ VAIK +K ++ FL +A I M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI-------MG 101
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQLC 232
+ D N I+RL+ + +V E + D LR + + + L + +
Sbjct: 102 QFDHPN---IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIA 157
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF---- 288
+ + +LS ++ +H DL NIL+ + K+ DFG + L +R
Sbjct: 158 SGMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLARVLEDDPEAAYTTRGGKIP 213
Query: 289 --YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLPP 343
+ SPE + + A D+WS G +L E M GE P + SN+ D + + E LPP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPP 271
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 246
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 247 VVS-------EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 297
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 298 RMNYVHRDLRAANILV--GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 356 GRFTIKSDVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 246
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 247 VVS-------EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 297
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 298 RMNYVHRDLRAANILV--GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 356 GRFTIKSDVWSFGILLTELTT 376
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 19/196 (9%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKN---KKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IGKG FG V+ D VA+K IKN + FL +A + + ++ + V I
Sbjct: 201 IGKGEFGDVMLG-DYRGN-KVAVKCIKNDATAQAFLAEASV---MTQLRHSNLVQLLGVI 255
Query: 184 VRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
V K L +V E ++ +L D LR+ + + KFS +C A+ +L
Sbjct: 256 VEEK------GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 308
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDL 302
N +H DL N+L+ + + K+ DFG + + + +PE L +
Sbjct: 309 -NFVHRDLAARNVLV--SEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST 365
Query: 303 AIDMWSLGCILVEMHT 318
D+WS G +L E+++
Sbjct: 366 KSDVWSFGILLWEIYS 381
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 30/205 (14%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G+GSFG+V + D + A+K ++ +EV +E + ++ IV L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVPL 115
Query: 187 ---KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
R W N + ELL +L L++ + + + Q L +L T
Sbjct: 116 YGAVREGPWVN---IFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHT-- 168
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFGSS-C----QLGQRIYQ--YI-QSRFYRSPEV 294
I+H D+K +N+LL + S + DFG + C LG+ + YI + + +PEV
Sbjct: 169 RRILHGDVKADNVLL-SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 295 LLGIPYDLAIDMWSLGCILVEMHTG 319
++G P D +D+WS C+++ M G
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 246
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 247 VVS-------EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 297
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 298 RMNYVHRDLRAANILV--GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 356 GRFTIKSDVWSFGILLTELTT 376
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G G FG+V VAIK +K + + FL +AQI KL + Y
Sbjct: 17 LGNGQFGEVWMG-TWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKL----KHDKLVQLYA 71
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E ++ +L D L++ R + L + Q+ + ++
Sbjct: 72 VVS-------EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE-- 122
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N IH DL+ NIL+ N KI DFG + + Q ++F + +PE L
Sbjct: 123 RMNYIHRDLRSANILVGN--GLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 180
Query: 298 IPYDLAIDMWSLGCILVEMHT-GEPLFSGSNEVDQMNKI 335
+ + D+WS G +L E+ T G + G N + + ++
Sbjct: 181 GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV 219
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 30/205 (14%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G+GSFG+V + D + A+K ++ +EV +E + ++ IV L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVPL 131
Query: 187 ---KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
R W N + ELL +L L++ + + + Q L +L T
Sbjct: 132 YGAVREGPWVN---IFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHT-- 184
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFGSS-C----QLGQRIYQ--YI-QSRFYRSPEV 294
I+H D+K +N+LL + A + DFG + C LG+ + YI + + +PEV
Sbjct: 185 RRILHGDVKADNVLLSSDGSRA-ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 295 LLGIPYDLAIDMWSLGCILVEMHTG 319
++G P D +D+WS C+++ M G
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 126 LIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
+GKG F + + D + + A KI+ K L Q E +EI + + + +V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQH-VVG 79
Query: 186 LKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN 244
F + + +V EL +L +L + + ++ R + +Q+ +L
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN--R 135
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYRSPEVLLGIPYD 301
+IH DLK N+ L + +KI DFG + ++ G+R + Y +PEVL +
Sbjct: 136 VIHRDLKLGNLFL--NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 302 LAIDMWSLGCILVEMHTGEPLFSGS 326
+D+WS+GCI+ + G+P F S
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 80
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 81 VVS-------EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 132 RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 19 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 73
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 74 VVS-------EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 124
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 125 RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 182
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 183 GRFTIKSDVWSFGILLTELTT 203
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 30/240 (12%)
Query: 104 DDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQ 163
D + D+ I G+ + IG GSFG V K + VA+K++ P Q Q
Sbjct: 3 DSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQ 54
Query: 164 IEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLR--NTNFRGVS 220
+ ++ K N + L + + L +V + +LY L T F +
Sbjct: 55 AFKNEVGVLRKTRHVN----ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK 110
Query: 221 LNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-----SSCQ 275
L ++Q + +L +IIH DLK NI L + +KI DFG S
Sbjct: 111 L---IDIARQTAQGMDYLHAK--SIIHRDLKSNNIFL--HEDLTVKIGDFGLATVKSRWS 163
Query: 276 LGQRIYQYIQSRFYRSPEVLL---GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQM 332
+ Q S + +PEV+ PY D+++ G +L E+ TG+ +S N DQ+
Sbjct: 164 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 19/196 (9%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKN---KKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IGKG FG V+ D VA+K IKN + FL +A + + ++ + V I
Sbjct: 29 IGKGEFGDVMLG-DYRGN-KVAVKCIKNDATAQAFLAEASV---MTQLRHSNLVQLLGVI 83
Query: 184 VRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
V K L +V E ++ +L D LR+ + + KFS +C A+ +L
Sbjct: 84 VEEK------GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 136
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDL 302
N +H DL N+L+ + + K+ DFG + + + +PE L +
Sbjct: 137 -NFVHRDLAARNVLV--SEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST 193
Query: 303 AIDMWSLGCILVEMHT 318
D+WS G +L E+++
Sbjct: 194 KSDVWSFGILLWEIYS 209
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 51/230 (22%)
Query: 127 IGKGSFGQVVK--AFDLEEQCH---VAIKIIKNKKPFLNQAQIEVK-LLEIMNKADVNNT 180
+G+G FG+VVK AF L+ + VA+K++K N + E++ LL N N
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-----NASPSELRDLLSEFNVLKQVNH 85
Query: 181 YYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNT----------------------NFR 217
++++L L L+ E Y +L LR + + R
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 218 GVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG 277
+++ F+ Q+ + +L+ E+ ++H DL NIL+ ++ +KI DFG L
Sbjct: 146 ALTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILVAEGRK--MKISDFG----LS 197
Query: 278 QRIYQ---YIQSRFYRSPEVLLGIP------YDLAIDMWSLGCILVEMHT 318
+ +Y+ Y++ R P + I Y D+WS G +L E+ T
Sbjct: 198 RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK--NKKP--FLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K N P FL +AQ+ KL + Y
Sbjct: 193 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKL----RHEKLVQLYA 247
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 248 VVS-------EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 298
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + Y Q ++F + +PE L
Sbjct: 299 RMNYVHRDLRAANILV--GENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALY 356
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 357 GRFTIKSDVWSFGILLTELTT 377
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 80
Query: 183 IVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S L D L+ + + L + Q+ + + ++
Sbjct: 81 VVS-------EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 132 RMNYVHRDLRAANILV--GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 30/240 (12%)
Query: 104 DDNHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQ 163
D + D+ I G+ + IG GSFG V K + VA+K++ P Q Q
Sbjct: 3 DSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQ 54
Query: 164 IEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLR--NTNFRGVS 220
+ ++ K N + L + + L +V + +LY L T F +
Sbjct: 55 AFKNEVGVLRKTRHVN----ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK 110
Query: 221 LNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-----SSCQ 275
L ++Q + +L +IIH DLK NI L + +KI DFG S
Sbjct: 111 L---IDIARQTAQGMDYLHAK--SIIHRDLKSNNIFL--HEDLTVKIGDFGLATVKSRWS 163
Query: 276 LGQRIYQYIQSRFYRSPEVLL---GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQM 332
+ Q S + +PEV+ PY D+++ G +L E+ TG+ +S N DQ+
Sbjct: 164 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 23 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 77
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E ++ +L D L+ + + L S Q+ + + ++
Sbjct: 78 VVS-------EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE-- 128
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 129 RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 186
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 187 GRFTIKSDVWSFGILLTELTT 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 19/196 (9%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKN---KKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
IGKG FG V+ D VA+K IKN + FL +A + + ++ + V I
Sbjct: 14 IGKGEFGDVMLG-DYRGN-KVAVKCIKNDATAQAFLAEASV---MTQLRHSNLVQLLGVI 68
Query: 184 VRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
V K L +V E ++ +L D LR+ + + KFS +C A+ +L
Sbjct: 69 VEEK------GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 121
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDL 302
N +H DL N+L+ + + K+ DFG + + + +PE L +
Sbjct: 122 -NFVHRDLAARNVLV--SEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST 178
Query: 303 AIDMWSLGCILVEMHT 318
D+WS G +L E+++
Sbjct: 179 KSDVWSFGILLWEIYS 194
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 30/205 (14%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G+GSFG+V + D + A+K ++ +EV +E + ++ IV L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVPL 129
Query: 187 ---KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
R W N + ELL +L L++ + + + Q L +L T
Sbjct: 130 YGAVREGPWVN---IFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHT-- 182
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFGSS-C----QLGQRIYQ--YI-QSRFYRSPEV 294
I+H D+K +N+LL + S + DFG + C LG+ + YI + + +PEV
Sbjct: 183 RRILHGDVKADNVLL-SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 295 LLGIPYDLAIDMWSLGCILVEMHTG 319
++G P D +D+WS C+++ M G
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 80
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 81 VVS-------EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 132 RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 17 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 71
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 72 VVS-------EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 122
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 123 RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 180
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 181 GRFTIKSDVWSFGILLTELTT 201
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 20/226 (8%)
Query: 115 EKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKK-------PFLNQAQIEVK 167
E +Y++ L+G G G V + + VAIK ++ + P + +EV
Sbjct: 47 EPLESQYQVGPLLGSGGSGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLS--YNLYDLLRNTNFRGVSLNLTR 225
LL+ ++ ++RL F + L+ E +L+D + T + L R
Sbjct: 107 LLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELAR 160
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QYI 284
F Q+ A+ ++H D+K ENIL+ + R +K++DFGS L +Y +
Sbjct: 161 SFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFD 217
Query: 285 QSRFYRSPEVLLGIPY-DLAIDMWSLGCILVEMHTGEPLFSGSNEV 329
+R Y PE + Y + +WSLG +L +M G+ F E+
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 35/225 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKA--FDLEEQCH---VAIKIIKNK------KPFLNQAQIEVK 167
DR + +G+G+FGQV++A F +++ VA+K++K + +++ +I +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-----NLYDLLRNTNFRGVSLN 222
+ +N VN + M C L +Y N + ++ ++L
Sbjct: 87 IGHHLNV--VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 223 LTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ 282
+S Q+ + FL++ + IH DL NILL +++ +KI DFG L + IY+
Sbjct: 145 HLIXYSFQVAKGMEFLASRK--XIHRDLAARNILLS--EKNVVKIXDFG----LARDIYK 196
Query: 283 ---YIQ---SRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
Y++ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 197 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 39/229 (17%)
Query: 119 DRYEIDSLIGKGSFGQVVKA----FDLEEQCH-VAIKIIKNK------KPFLNQAQIEVK 167
DR ++ +G+G+FGQV++A D C VA+K++K + +++ +I +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKF 227
+ +N VN + M C L +Y ++ +L + F
Sbjct: 78 IGHHLNV--VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 228 ---------SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
S Q+ + FL++ + IH DL NILL +++ +KI DFG L +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFG----LAR 187
Query: 279 RIYQ---YIQ---SRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
IY+ Y++ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 188 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 15 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 69
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 70 VVS-------EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 120
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 121 RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 178
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 179 GRFTIKSDVWSFGILLTELTT 199
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 80
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 81 VVS-------EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 132 RMNYVHRDLRAANILV--GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 39/229 (17%)
Query: 119 DRYEIDSLIGKGSFGQVVKA----FDLEEQCH-VAIKIIKNK------KPFLNQAQIEVK 167
DR ++ +G+G+FGQV++A D C VA+K++K + +++ +I +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKF 227
+ +N VN + M C L +Y ++ +L + F
Sbjct: 78 IGHHLNV--VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 228 ---------SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
S Q+ + FL++ + IH DL NILL +++ +KI DFG L +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFG----LAR 187
Query: 279 RIYQ---YIQ---SRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
IY+ Y++ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 188 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG GSFG V K + VA+K++ P Q Q + ++ K N + L
Sbjct: 18 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN----ILL 70
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLR--NTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
+ + L +V + +LY L T F + L ++Q + +L
Sbjct: 71 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAK-- 125
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFG-----SSCQLGQRIYQYIQSRFYRSPEVLL-- 296
+IIH DLK NI L + +KI DFG S + Q S + +PEV+
Sbjct: 126 SIIHRDLKSNNIFL--HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 297 -GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQM 332
PY D+++ G +L E+ TG+ +S N DQ+
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 220
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG GSFG V K + VA+K++ P Q Q + ++ K N + L
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN----ILL 68
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLR--NTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
+ + L +V + +LY L T F + L ++Q + +L
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAK-- 123
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFG-----SSCQLGQRIYQYIQSRFYRSPEVLL-- 296
+IIH DLK NI L + +KI DFG S + Q S + +PEV+
Sbjct: 124 SIIHRDLKSNNIFL--HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 297 -GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQM 332
PY D+++ G +L E+ TG+ +S N DQ+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 80
Query: 183 IVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S L D L+ + + L + Q+ + + ++
Sbjct: 81 VVS-------EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 132 RMNYVHRDLRAANILV--GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 39/229 (17%)
Query: 119 DRYEIDSLIGKGSFGQVVKA----FDLEEQCH-VAIKIIKNK------KPFLNQAQIEVK 167
DR ++ +G+G+FGQV++A D C VA+K++K + +++ +I +
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKF 227
+ +N VN + M C L +Y ++ +L + F
Sbjct: 89 IGHHLNV--VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDF 146
Query: 228 ---------SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
S Q+ + FL++ + IH DL NILL +++ +KI DFG L +
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFG----LAR 198
Query: 279 RIYQ---YIQ---SRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
IY+ Y++ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 199 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG GSFG V K + VA+K++ P Q Q + ++ K N + L
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN----ILL 68
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLR--NTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
+ + L +V + +LY L T F + L ++Q + +L
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAK-- 123
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFG-----SSCQLGQRIYQYIQSRFYRSPEVLL-- 296
+IIH DLK NI L + +KI DFG S + Q S + +PEV+
Sbjct: 124 SIIHRDLKSNNIFL--HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 297 -GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQM 332
PY D+++ G +L E+ TG+ +S N DQ+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 45/269 (16%)
Query: 122 EIDSLIGKGSFGQV----VKAFDLEEQCHVAIKIIKN------KKPFLNQAQIEVKLLEI 171
+I+ +IG G FG+V +KA +E C VAIK +K ++ FL++A I
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESC-VAIKTLKGGYTERQRREFLSEAS-------I 70
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQL 231
M + + N I+RL+ + ++ E + D N ++ + +
Sbjct: 71 MGQFEHPN---IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGI 127
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF--- 288
+ + +L+ E++ +H DL NIL+ + K+ DFG S L + ++
Sbjct: 128 ASGMRYLA--EMSYVHRDLAARNILVNS--NLVCKVSDFGLSRFLEENSSDPTETSSLGG 183
Query: 289 -----YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGL 341
+ +PE + + A D WS G ++ E M GE P + SN+ D +N I + L
Sbjct: 184 KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ-DVINAIEQDYRL 242
Query: 342 PP---------KHLLDGAHKTRKYFDKMP 361
PP + +LD K R + P
Sbjct: 243 PPPPDCPTSLHQLMLDCWQKDRNARPRFP 271
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ K+ + Y
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKI----RHEKLVQLYA 80
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 81 VVS-------EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 132 RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 19/152 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKI--IKNKKPFLNQAQIEVKLLEIMNKAD--VNNTYY 182
IG G+FG++ +L +VAIK+ IK++ P Q +E + + + A + YY
Sbjct: 8 IGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAP---QLHLEYRFYKQLGSAGEGLPQVYY 64
Query: 183 IVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
++ +V ELL +L DL + R +L + QL + + ++ +
Sbjct: 65 FGPXGKYN------AMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLLSRMEYVHSK- 116
Query: 243 LNIIHCDLKPENILL---CNPKRSAIKIVDFG 271
N+I+ D+KPEN L+ N K I I+DFG
Sbjct: 117 -NLIYRDVKPENFLIGRQGNKKEHVIHIIDFG 147
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 23 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 77
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E ++ +L D L+ + + L S Q+ + + ++
Sbjct: 78 VVS-------EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE-- 128
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + + Q ++F + +PE L
Sbjct: 129 RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALY 186
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 187 GRFTIKSDVWSFGILLTELTT 207
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG+V + VA+K +K + E L++ + + Y +V
Sbjct: 31 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 88
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E + + +L D L+ + +++N + Q+ + F+ E N
Sbjct: 89 ------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNY 140
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
IH DL+ NIL+ + + KI DFG + + Y + ++F + +PE + +
Sbjct: 141 IHRDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 302 LAIDMWSLGCILVEMHT 318
+ D+WS G +L E+ T
Sbjct: 199 IKSDVWSFGILLTEIVT 215
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 27/242 (11%)
Query: 100 EGYDDDNHDYI----IQHGEKF---LDRYEIDSLIGKGSFGQVVKA--FDLEEQCHVAIK 150
E Y+ +++ +I + + EK+ + + +G G+FG+VV+A F L ++ V
Sbjct: 20 ESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV 79
Query: 151 IIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYD 209
+K K + + E + E+ + + IV L + ++ E Y +L +
Sbjct: 80 AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 139
Query: 210 LLR--------NTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPK 261
LR + R + L FS Q+ + FL++ N IH D+ N+LL N
Sbjct: 140 FLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGH 197
Query: 262 RSAIKIVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEM 316
+ KI DFG + + ++ + +PE + Y + D+WS G +L E+
Sbjct: 198 VA--KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
Query: 317 HT 318
+
Sbjct: 256 FS 257
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 80
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 81 VVS-------EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL NIL+ + K+ DFG + + Y Q ++F + +PE L
Sbjct: 132 RMNYVHRDLAAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKI--IKNKKPFLNQAQIEVKLLEIMNKAD-V 177
+ + IG G+FG++ +L +VAIK+ +K++ P Q +E + + + D +
Sbjct: 32 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP---QLHLEYRFYKQLGSGDGI 88
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
YY ++ +V ELL +L DL + R SL + QL + + +
Sbjct: 89 PQVYYFGPCGKYN------AMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEY 141
Query: 238 LSTPELNIIHCDLKPENILLCNP---KRSAIKIVDFG 271
+ + N+I+ D+KPEN L+ P + I I+DF
Sbjct: 142 VHSK--NLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 176
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKI--IKNKKPFLNQAQIEVKLLEIMNKAD-V 177
+ + IG G+FG++ +L +VAIK+ +K++ P Q +E + + + D +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP---QLHLEYRFYKQLGSGDGI 67
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLF 237
YY ++ +V ELL +L DL + R SL + QL + + +
Sbjct: 68 PQVYYFGPCGKYN------AMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEY 120
Query: 238 LSTPELNIIHCDLKPENILLCNP---KRSAIKIVDFG 271
+ + N+I+ D+KPEN L+ P + I I+DF
Sbjct: 121 VHSK--NLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG VVK Q VAIK+IK ++ E K++ ++ + Y +
Sbjct: 32 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+R ++ E ++ L + LR R + L + + +C A+ +L + +
Sbjct: 91 QRPIF------IITEYMANGCLLNYLREMRHRFQTQQLL-EMCKDVCEAMEYLESKQF-- 141
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSPEVLLGIPYD 301
+H DL N L+ + + +K+ DFG S L + S+F + PEVL+ +
Sbjct: 142 LHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 302 LAIDMWSLGCILVEMHT 318
D+W+ G ++ E+++
Sbjct: 200 SKSDIWAFGVLMWEIYS 216
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 27/242 (11%)
Query: 100 EGYDDDNHDYI----IQHGEKF---LDRYEIDSLIGKGSFGQVVKA--FDLEEQCHVAIK 150
E Y+ +++ +I + + EK+ + + +G G+FG+VV+A F L ++ V
Sbjct: 12 ESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV 71
Query: 151 IIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYD 209
+K K + + E + E+ + + IV L + ++ E Y +L +
Sbjct: 72 AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 131
Query: 210 LLR--------NTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPK 261
LR + R + L FS Q+ + FL++ N IH D+ N+LL N
Sbjct: 132 FLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGH 189
Query: 262 RSAIKIVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEM 316
+ KI DFG + + ++ + +PE + Y + D+WS G +L E+
Sbjct: 190 VA--KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
Query: 317 HT 318
+
Sbjct: 248 FS 249
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 39/229 (17%)
Query: 119 DRYEIDSLIGKGSFGQVVKA----FDLEEQCH-VAIKIIKNK------KPFLNQAQIEVK 167
DR ++ +G+G+FGQV++A D C VA+K++K + +++ +I +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKF 227
+ +N VN + M C L +Y ++ +L + F
Sbjct: 87 IGHHLNV--VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 228 ---------SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
S Q+ + FL++ + IH DL NILL +++ +KI DFG L +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFG----LAR 196
Query: 279 RIYQ---YIQ---SRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
IY+ Y++ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 197 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 27/202 (13%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
IG G FG V + L + VAIK I+ +++ F+ +A++ +KL +
Sbjct: 16 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFIEEAEVMMKL----------SHPK 64
Query: 183 IVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGV-SLNLTRKFSQQLCTALLFLST 240
+V+L + + +CLV E + + L D LR RG+ + +C + +L
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLE- 121
Query: 241 PELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSPEVLL 296
E +IH DL N L+ + IK+ DFG + L + ++F + SPEV
Sbjct: 122 -EACVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 178
Query: 297 GIPYDLAIDMWSLGCILVEMHT 318
Y D+WS G ++ E+ +
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFS 200
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 122 EIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
+++ +G G FG+V A + VA+K +K + E +++ + + +
Sbjct: 191 KLEKKLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 249
Query: 182 YIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLST 240
+V + + ++ E ++ +L D L++ L FS Q+ + F+
Sbjct: 250 AVVT-------KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE- 301
Query: 241 PELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLL 296
+ N IH DL+ NIL+ KI DFG + + Y + ++F + +PE +
Sbjct: 302 -QRNYIHRDLRAANILVS--ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 358
Query: 297 GIPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L+E+ T
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVT 380
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 43/226 (19%)
Query: 127 IGKGSFGQVVK--AFDLEEQCH---VAIKIIKNKKPFLNQAQIEVK-LLEIMNKADVNNT 180
+G+G FG+VVK AF L+ + VA+K++K N + E++ LL N N
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-----NASPSELRDLLSEFNVLKQVNH 85
Query: 181 YYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNT----------------------NFR 217
++++L L L+ E Y +L LR + + R
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 218 GVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG 277
+++ F+ Q+ + +L+ E++++H DL NIL+ ++ +KI DFG S +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLA--EMSLVHRDLAARNILVAEGRK--MKISDFGLSRDVY 201
Query: 278 QR--IYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ + Q R + + E L Y D+WS G +L E+ T
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 39/229 (17%)
Query: 119 DRYEIDSLIGKGSFGQVVKA----FDLEEQCH-VAIKIIKNK------KPFLNQAQIEVK 167
DR ++ +G+G+FGQV++A D C VA+K++K + +++ +I +
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKF 227
+ +N VN + M C L +Y ++ +L + F
Sbjct: 124 IGHHLNV--VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 181
Query: 228 ---------SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
S Q+ + FL++ + IH DL NILL +++ +KI DFG L +
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFG----LAR 233
Query: 279 RIYQ---YIQ---SRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
IY+ Y++ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 234 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 35/225 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKA--FDLEEQCH---VAIKIIKNK------KPFLNQAQIEVK 167
DR + +G+G+FGQV++A F +++ VA+K++K + +++ +I +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-----NLYDLLRNTNFRGVSLN 222
+ +N VN + M C L +Y N + ++ ++L
Sbjct: 87 IGHHLNV--VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 223 LTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ 282
+S Q+ + FL++ + IH DL NILL +++ +KI DFG L + IY+
Sbjct: 145 HLICYSFQVAKGMEFLASRK--XIHRDLAARNILLS--EKNVVKICDFG----LARDIYK 196
Query: 283 ---YIQ---SRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
Y++ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 197 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG+V + VA+K +K + E L++ + + Y +V
Sbjct: 26 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 83
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E + + +L D L+ + +++N + Q+ + F+ E N
Sbjct: 84 ------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNY 135
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
IH DL+ NIL+ + + KI DFG + + Y + ++F + +PE + +
Sbjct: 136 IHRDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 302 LAIDMWSLGCILVEMHT 318
+ D+WS G +L E+ T
Sbjct: 194 IKSDVWSFGILLTEIVT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG+V + VA+K +K + E L++ + + Y +V
Sbjct: 27 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 84
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E + + +L D L+ + +++N + Q+ + F+ E N
Sbjct: 85 ------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNY 136
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
IH DL+ NIL+ + + KI DFG + + Y + ++F + +PE + +
Sbjct: 137 IHRDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 302 LAIDMWSLGCILVEMHT 318
+ D+WS G +L E+ T
Sbjct: 195 IKSDVWSFGILLTEIVT 211
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 116/274 (42%), Gaps = 55/274 (20%)
Query: 122 EIDSLIGKGSFGQV----VKAFDLEEQCHVAIKIIKN------KKPFLNQAQIEVKLLEI 171
+I+ +IG G FG+V +KA +E C VAIK +K ++ FL++A I
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESC-VAIKTLKGGYTERQRREFLSEAS-------I 68
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQL 231
M + + N I+RL+ + ++ E + D N ++ + +
Sbjct: 69 MGQFEHPN---IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGI 125
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS-------------CQLGQ 278
+ + +L+ E++ +H DL NIL+ + K+ DFG S LG
Sbjct: 126 ASGMRYLA--EMSYVHRDLAARNILVNS--NLVCKVSDFGLSRFLEENSSDPTYTSSLGG 181
Query: 279 RIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIV 336
+I + +PE + + A D WS G ++ E M GE P + SN+ D +N I
Sbjct: 182 KI-----PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ-DVINAIE 235
Query: 337 EVLGLPP---------KHLLDGAHKTRKYFDKMP 361
+ LPP + +LD K R + P
Sbjct: 236 QDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFP 269
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 25/201 (12%)
Query: 122 EIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
+++ +G G FG+V A + VA+K +K + E +++ + + +
Sbjct: 185 KLEKKLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 243
Query: 182 YIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLST 240
+V + + ++ E ++ +L D L++ L FS Q+ + F+
Sbjct: 244 AVVT-------KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE- 295
Query: 241 PELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF---YRSPEVLLG 297
+ N IH DL+ NIL+ KI DFG + + ++F + +PE +
Sbjct: 296 -QRNYIHRDLRAANILVS--ASLVCKIADFGLA---------RVGAKFPIKWTAPEAINF 343
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L+E+ T
Sbjct: 344 GSFTIKSDVWSFGILLMEIVT 364
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG+V + VA+K +K + E L++ + + Y +V
Sbjct: 21 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 78
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E + + +L D L+ + +++N + Q+ + F+ E N
Sbjct: 79 ------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNY 130
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
IH DL+ NIL+ + + KI DFG + + Y + ++F + +PE + +
Sbjct: 131 IHRDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 302 LAIDMWSLGCILVEMHT 318
+ D+WS G +L E+ T
Sbjct: 189 IKSDVWSFGILLTEIVT 205
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 43/226 (19%)
Query: 127 IGKGSFGQVVK--AFDLEEQCH---VAIKIIKNKKPFLNQAQIEVK-LLEIMNKADVNNT 180
+G+G FG+VVK AF L+ + VA+K++K N + E++ LL N N
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-----NASPSELRDLLSEFNVLKQVNH 85
Query: 181 YYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNT----------------------NFR 217
++++L L L+ E Y +L LR + + R
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 218 GVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG 277
+++ F+ Q+ + +L+ E+ ++H DL NIL+ ++ +KI DFG S +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILVAEGRK--MKISDFGLSRDVY 201
Query: 278 QR--IYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ + Q R + + E L Y D+WS G +L E+ T
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG VVK Q VAIK+IK ++ E K++ ++ + Y +
Sbjct: 23 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+R ++ E ++ L + LR R + L + + +C A+ +L + +
Sbjct: 82 QRPIF------IITEYMANGCLLNYLREMRHRFQTQQLL-EMCKDVCEAMEYLESKQF-- 132
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSPEVLLGIPYD 301
+H DL N L+ + + +K+ DFG S L + S+F + PEVL+ +
Sbjct: 133 LHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 302 LAIDMWSLGCILVEMHT 318
D+W+ G ++ E+++
Sbjct: 191 SKSDIWAFGVLMWEIYS 207
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG VVK Q VAIK+IK ++ E K++ ++ + Y +
Sbjct: 32 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+R ++ E ++ L + LR R + L + + +C A+ +L + +
Sbjct: 91 QRPIF------IITEYMANGCLLNYLREMRHRFQTQQLL-EMCKDVCEAMEYLESKQF-- 141
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSPEVLLGIPYD 301
+H DL N L+ + + +K+ DFG S L + S+F + PEVL+ +
Sbjct: 142 LHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 302 LAIDMWSLGCILVEMHT 318
D+W+ G ++ E+++
Sbjct: 200 SKSDIWAFGVLMWEIYS 216
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 17/222 (7%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG+V + VA+K +K + E L++ + + Y +V
Sbjct: 21 LGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 187 KRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E ++ +L D L++ V L FS Q+ + ++ N
Sbjct: 80 E------EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK--NY 131
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
IH DL+ N+L+ + KI DFG + + Y + ++F + +PE + +
Sbjct: 132 IHRDLRAANVLVS--ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 302 LAIDMWSLGCILVEMHT-GEPLFSGSNEVDQMNKIVEVLGLP 342
+ D+WS G +L E+ T G+ + G D M + + +P
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMP 231
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG GSFG V K + VA+K++ P Q Q + ++ K N + L
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN----ILL 68
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLR--NTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
+ L +V + +LY L T F + L ++Q + +L
Sbjct: 69 FMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAK-- 123
Query: 244 NIIHCDLKPENILLCNPKRSAIKIVDFG-----SSCQLGQRIYQYIQSRFYRSPEVLL-- 296
+IIH DLK NI L + +KI DFG S + Q S + +PEV+
Sbjct: 124 SIIHRDLKSNNIFL--HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 297 -GIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQM 332
PY D+++ G +L E+ TG+ +S N DQ+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG VVK Q VAIK+IK ++ E K++ ++ + Y +
Sbjct: 16 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+R ++ E ++ L + LR R + L + + +C A+ +L + +
Sbjct: 75 QRPIF------IITEYMANGCLLNYLREMRHRFQTQQLL-EMCKDVCEAMEYLESKQF-- 125
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSPEVLLGIPYD 301
+H DL N L+ + + +K+ DFG S L + S+F + PEVL+ +
Sbjct: 126 LHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 302 LAIDMWSLGCILVEMHT 318
D+W+ G ++ E+++
Sbjct: 184 SKSDIWAFGVLMWEIYS 200
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 16 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 70
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 71 VVS-------EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 121
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Q ++F + +PE L
Sbjct: 122 RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 179
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 180 GRFTIKSDVWSFGILLTELTT 200
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG VVK Q VAIK+IK ++ E K++ ++ + Y +
Sbjct: 12 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+R ++ E ++ L + LR R + L + + +C A+ +L + +
Sbjct: 71 QRPIF------IITEYMANGCLLNYLREMRHRFQTQQLL-EMCKDVCEAMEYLESKQF-- 121
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSPEVLLGIPYD 301
+H DL N L+ + + +K+ DFG S L + S+F + PEVL+ +
Sbjct: 122 LHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 302 LAIDMWSLGCILVEMHT 318
D+W+ G ++ E+++
Sbjct: 180 SKSDIWAFGVLMWEIYS 196
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 122 EIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
+++ +G G FG+V A + VA+K +K + E +++ + + +
Sbjct: 18 KLEKKLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 76
Query: 182 YIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLST 240
+V + + ++ E ++ +L D L++ L FS Q+ + F+
Sbjct: 77 AVVT-------KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE- 128
Query: 241 PELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLL 296
+ N IH DL+ NIL+ KI DFG + + Y + ++F + +PE +
Sbjct: 129 -QRNYIHRDLRAANILVS--ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 185
Query: 297 GIPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L+E+ T
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVT 207
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYI 284
F+QQ+C + +L + IH DL N+LL N + +KI DFG + + G Y+
Sbjct: 139 FAQQICEGMAYLHAQ--HYIHRDLAARNVLLDNDR--LVKIGDFGLAKAVPEGHEXYRVR 194
Query: 285 QSR----FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ F+ +PE L + A D+WS G L E+ T
Sbjct: 195 EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG+V + VA+K +K + E L++ + + Y +V
Sbjct: 16 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 73
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E + + +L D L+ + +++N + Q+ + F+ E N
Sbjct: 74 ------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNY 125
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
IH DL+ NIL+ + + KI DFG + + Y + ++F + +PE + +
Sbjct: 126 IHRDLRAANILVSDT--LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 302 LAIDMWSLGCILVEMHT 318
+ D+WS G +L E+ T
Sbjct: 184 IKSDVWSFGILLTEIVT 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG VVK Q VAIK+IK ++ E K++ ++ + Y +
Sbjct: 17 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+R ++ E ++ L + LR R + L + + +C A+ +L + +
Sbjct: 76 QRPIF------IITEYMANGCLLNYLREMRHRFQTQQLL-EMCKDVCEAMEYLESKQF-- 126
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQSRF---YRSPEVLLGIPYD 301
+H DL N L+ + + +K+ DFG S L + S+F + PEVL+ +
Sbjct: 127 LHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 302 LAIDMWSLGCILVEMHT 318
D+W+ G ++ E+++
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 114 GEKFLDRYEIDSL--IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVK 167
G L R EI L +G G FG VVK + Q VA+K+IK ++ F +AQ +K
Sbjct: 1 GHMELKREEITLLKELGSGQFG-VVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMK 59
Query: 168 LL--EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTR 225
L +++ V + Y + + ++ ++ CL+ L S+ +G+ +
Sbjct: 60 LSHPKLVKFYGVCSKEYPIYIVTEYI--SNGCLLNYLRSHG----------KGLEPSQLL 107
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYI 284
+ +C + FL + + IH DL N L+ + +K+ DFG + L + +
Sbjct: 108 EMCYDVCEGMAFLESHQF--IHRDLAARNCLV--DRDLCVKVSDFGMTRYVLDDQYVSSV 163
Query: 285 QSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
++F + +PEV Y D+W+ G ++ E+ +
Sbjct: 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 25/201 (12%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIK----NKKPFLNQAQIEVKLLEIMNKADVNNTYY 182
+G+G FG+V VAIK +K + + FL +AQ+ KL + Y
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL----RHEKLVQLYA 80
Query: 183 IVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
+V + +V E +S +L D L+ + + L + Q+ + + ++
Sbjct: 81 VVS-------EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLG 297
+N +H DL+ NIL+ + K+ DFG + + Q ++F + +PE L
Sbjct: 132 RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 189
Query: 298 IPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 55/236 (23%)
Query: 119 DRYEIDSLIGKGSFGQVVKA--FDLEEQCH---VAIKIIKNK------KPFLNQAQIEVK 167
DR ++ +G+G+FGQV++A F +++ VA+K++K + +++ +I +
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 168 --------------------LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNL 207
L+ I+ N +R KR+ E + Y
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-----------EFVPYKP 137
Query: 208 YDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKI 267
DL ++ ++L +S Q+ + FL++ + IH DL NILL +++ +KI
Sbjct: 138 EDLYKDF----LTLEHLIXYSFQVAKGMEFLASRK--XIHRDLAARNILLS--EKNVVKI 189
Query: 268 VDFGSSCQLGQR--IYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
DFG + + + + +R + +PE + Y + D+WS G +L E+ +
Sbjct: 190 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 48/230 (20%)
Query: 123 IDSLIGKGSFGQVVKAFDLE---EQCHVAIKIIK------NKKPFLNQAQIE-------- 165
++ ++G+G FG+V + E+ +VA+K K NK+ F+++A I
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 71
Query: 166 VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTN-FRGVSLNLT 224
VKL+ I+ + T+ I+ L + EL Y L RN N + ++L L
Sbjct: 72 VKLIGIIEE---EPTWIIMELYPYG----------ELGHY----LERNKNSLKVLTLVL- 113
Query: 225 RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQY 283
+S Q+C A+ +L + +N +H D+ NIL+ +P+ +K+ DFG S + + Y+
Sbjct: 114 --YSLQICKAMAYLES--INCVHRDIAVRNILVASPE--CVKLGDFGLSRYIEDEDYYKA 167
Query: 284 IQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEPLFSGSNE 328
+R + SPE + + A D+W + E+ + +P F N+
Sbjct: 168 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK 217
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 48/230 (20%)
Query: 123 IDSLIGKGSFGQVVKAFDLE---EQCHVAIKIIK------NKKPFLNQAQIE-------- 165
++ ++G+G FG+V + E+ +VA+K K NK+ F+++A I
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 87
Query: 166 VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTN-FRGVSLNLT 224
VKL+ I+ + T+ I+ L + EL Y L RN N + ++L L
Sbjct: 88 VKLIGIIEE---EPTWIIMELYPYG----------ELGHY----LERNKNSLKVLTLVL- 129
Query: 225 RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQY 283
+S Q+C A+ +L + +N +H D+ NIL+ +P+ +K+ DFG S + + Y+
Sbjct: 130 --YSLQICKAMAYLES--INCVHRDIAVRNILVASPE--CVKLGDFGLSRYIEDEDYYKA 183
Query: 284 IQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEPLFSGSNE 328
+R + SPE + + A D+W + E+ + +P F N+
Sbjct: 184 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK 233
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 48/230 (20%)
Query: 123 IDSLIGKGSFGQVVKAFDLE---EQCHVAIKIIK------NKKPFLNQAQIE-------- 165
++ ++G+G FG+V + E+ +VA+K K NK+ F+++A I
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 166 VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTN-FRGVSLNLT 224
VKL+ I+ + T+ I+ L + EL Y L RN N + ++L L
Sbjct: 76 VKLIGIIEE---EPTWIIMELYPYG----------ELGHY----LERNKNSLKVLTLVL- 117
Query: 225 RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQY 283
+S Q+C A+ +L + +N +H D+ NIL+ +P+ +K+ DFG S + + Y+
Sbjct: 118 --YSLQICKAMAYLES--INCVHRDIAVRNILVASPE--CVKLGDFGLSRYIEDEDYYKA 171
Query: 284 IQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEPLFSGSNE 328
+R + SPE + + A D+W + E+ + +P F N+
Sbjct: 172 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK 221
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 58/265 (21%)
Query: 106 NHDYIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQ---CHVAIKIIKN------KK 156
DY IQ +R E+ IG+G FG V + + + VAIK KN ++
Sbjct: 2 TRDYEIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE 56
Query: 157 PFLNQA----QIE----VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLY 208
FL +A Q + VKL+ ++ + N +I+ LC + EL S+
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITE----NPVWIIM---------ELCTLGELRSF--- 100
Query: 209 DLLRNTNFRGVSLNLTR--KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIK 266
R SL+L ++ QL TAL +L + +H D+ N+L+ + +K
Sbjct: 101 -----LQVRKFSLDLASLILYAYQLSTALAYLESKRF--VHRDIAARNVLVSS--NDCVK 151
Query: 267 IVDFGSSCQL-GQRIYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVE--MHTGE 320
+ DFG S + + + + + +PE + + A D+W G + E MH +
Sbjct: 152 LGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 211
Query: 321 PLFSGSNEVDQMNKIV--EVLGLPP 343
P F G D + +I E L +PP
Sbjct: 212 P-FQGVKNNDVIGRIENGERLPMPP 235
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 125 SLIGKGSFGQV----VKAFDLEEQCHVAIKIIKNKKPFLNQA-QIEVKLLEIMNKADVNN 179
S +GKG+FG V VA+K +++ P + Q E+++L+ ++
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH------ 69
Query: 180 TYYIVRLK--RHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRK--FSQQLCTA 234
+ +IV+ + + R L LV E L S L D L+ R L+ +R +S Q+C
Sbjct: 70 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKG 126
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSR------F 288
+ +L + +H DL NIL+ + +KI DFG + L Y+ F
Sbjct: 127 MEYLGS--RRCVHRDLAARNILV--ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 182
Query: 289 YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ +PE L + D+WS G +L E+ T
Sbjct: 183 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEV-KLLEIMNKADVNNTYYI-- 183
+G+GSFG+V + D + A+K ++ +EV + E+M A + + +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR----------LEVFRAEELMACAGLTSPRIVPL 150
Query: 184 VRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
R W N + ELL +L L++ + + + Q L +L +
Sbjct: 151 YGAVREGPWVN---IFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHS-- 203
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSC-----QLGQRIYQ--YI-QSRFYRSPEV 294
I+H D+K +N+LL + S + DFG + LG+ + YI + + +PEV
Sbjct: 204 RRILHGDVKADNVLLSS-DGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEV 262
Query: 295 LLGIPYDLAIDMWSLGCILVEMHTG 319
+LG D +D+WS C+++ M G
Sbjct: 263 VLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 31/246 (12%)
Query: 100 EGYDDDNHDYI----IQHGEKF---LDRYEIDSLIGKGSFGQVVKA--FDLEEQCHVAIK 150
E Y+ +++ +I + + EK+ + + +G G+FG+VV+A F L ++ V
Sbjct: 20 ESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV 79
Query: 151 IIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYD 209
+K K + + E + E+ + + IV L + ++ E Y +L +
Sbjct: 80 AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 139
Query: 210 LLRNTN--------FRGVSLNLTRK----FSQQLCTALLFLSTPELNIIHCDLKPENILL 257
LR + F + L+ + FS Q+ + FL++ N IH D+ N+LL
Sbjct: 140 FLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK--NCIHRDVAARNVLL 197
Query: 258 CNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCI 312
N + KI DFG + + ++ + +PE + Y + D+WS G +
Sbjct: 198 TNGHVA--KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 313 LVEMHT 318
L E+ +
Sbjct: 256 LWEIFS 261
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 125 SLIGKGSFGQV----VKAFDLEEQCHVAIKIIKNKKPFLNQA-QIEVKLLEIMNKADVNN 179
S +GKG+FG V VA+K +++ P + Q E+++L+ ++
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH------ 70
Query: 180 TYYIVRLK--RHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRK--FSQQLCTA 234
+ +IV+ + + R L LV E L S L D L+ R L+ +R +S Q+C
Sbjct: 71 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKG 127
Query: 235 LLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSR------F 288
+ +L + +H DL NIL+ + +KI DFG + L Y+ F
Sbjct: 128 MEYLGS--RRCVHRDLAARNILV--ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 183
Query: 289 YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ +PE L + D+WS G +L E+ T
Sbjct: 184 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 36/241 (14%)
Query: 122 EIDSLIGKGSFGQV----VKAFDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEI 171
+I+ +IG G FG+V +K E C VAIK +K ++ FL++A I
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREIC-VAIKTLKAGYTDKQRRDFLSEASI------- 83
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQ 230
M + D N I+ L+ + ++ E + D LR + R + L +
Sbjct: 84 MGQFDHPN---IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RG 139
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF-- 288
+ + + +LS +++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 140 IGSGMKYLS--DMSAVHRDLAARNILVNS--NLVCKVSDFGMSRVLEDDPEAAYTTRGGK 195
Query: 289 ----YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLP 342
+ +PE + + A D+WS G ++ E M GE P + SN+ D + I E LP
Sbjct: 196 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYRLP 254
Query: 343 P 343
P
Sbjct: 255 P 255
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 39/229 (17%)
Query: 119 DRYEIDSLIGKGSFGQVVKA----FDLEEQCH-VAIKIIKNK------KPFLNQAQIEVK 167
DR ++ +G+G+FGQV++A D C VA+K++K + +++ +I +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKF 227
+ +N VN + M C L +Y ++ +L + F
Sbjct: 87 IGHHLNV--VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 228 ---------SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
S Q+ + FL++ + IH DL NILL +++ +KI DFG L +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFG----LAR 196
Query: 279 RIYQ------YIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
IY+ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 197 DIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 15/218 (6%)
Query: 127 IGKGSFGQVVKA-FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
+G GSFG V + +D V++ + K L+Q + + +N + ++R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 186 LKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN 244
L + + +V EL +L D LR + L+R ++ Q+ + +L +
Sbjct: 86 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAEGMGYLESK--R 141
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF------YRSPEVLLGI 298
IH DL N+LL R +KI DFG L Q Y+ + +PE L
Sbjct: 142 FIHRDLAARNLLLAT--RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 299 PYDLAIDMWSLGCILVEMHT-GEPLFSGSNEVDQMNKI 335
+ A D W G L EM T G+ + G N ++KI
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 125 SLIGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNKKPFLNQA-QIEVKLLEIM 172
S +GKG+FG V E C VA+K +++ P + Q E+++L+ +
Sbjct: 29 SQLGKGNFGSV-------ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL 81
Query: 173 NKADVNNTYYIVRLK--RHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRK--F 227
+ + +IV+ + + R L LV E L S L D L+ R L+ +R +
Sbjct: 82 H------SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLY 132
Query: 228 SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSR 287
S Q+C + +L + +H DL NIL+ + +KI DFG + L Y+
Sbjct: 133 SSQICKGMEYLGS--RRCVHRDLAARNILV--ESEAHVKIADFGLAKLLPLDKDYYVVRE 188
Query: 288 ------FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
F+ +PE L + D+WS G +L E+ T
Sbjct: 189 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 32/230 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDL-------EEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
D+ + +G+G+FGQVV A + +E VA+K++K+ + + + V +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL-VSEMEM 93
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRKFS 228
M + I+ L L ++ E S NL + LR G+ S ++ R
Sbjct: 94 MKM--IGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 229 QQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
+Q+ L T +L IH DL N+L+ + + +KI DFG + +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLARDINN 209
Query: 279 RIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQS 286
F+QQ+C + +L + + IH +L N+LL N + +KI DFG + + + ++Y +
Sbjct: 122 FAQQICEGMAYLHSQ--HYIHRNLAARNVLLDNDR--LVKIGDFGLAKAVPEG-HEYYRV 176
Query: 287 R-------FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
R F+ +PE L + A D+WS G L E+ T
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 32/230 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDL-------EEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
D+ + +G+G+FGQVV A + +E VA+K++K+ + + + V +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDL-VSEMEM 93
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRKFS 228
M + I+ L L ++ E S NL + LR G+ S ++ R
Sbjct: 94 MKM--IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 229 QQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
+Q+ L T +L IH DL N+L+ + + +KI DFG + +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLARDINN 209
Query: 279 RIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 15/218 (6%)
Query: 127 IGKGSFGQVVKA-FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
+G GSFG V + +D V++ + K L+Q + + +N + ++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 186 LKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN 244
L + + +V EL +L D LR + L+R ++ Q+ + +L +
Sbjct: 76 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAEGMGYLESKRF- 132
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF------YRSPEVLLGI 298
IH DL N+LL R +KI DFG L Q Y+ + +PE L
Sbjct: 133 -IHRDLAARNLLLAT--RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 299 PYDLAIDMWSLGCILVEMHT-GEPLFSGSNEVDQMNKI 335
+ A D W G L EM T G+ + G N ++KI
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 33/248 (13%)
Query: 100 EGYDDDNHDYI----IQHGEKF---LDRYEIDSLIGKGSFGQVVKA--FDLEEQCHVAIK 150
E Y+ +++ +I + + EK+ + + +G G+FG+VV+A F L ++ V
Sbjct: 20 ESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV 79
Query: 151 IIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYD 209
+K K + + E + E+ + + IV L + ++ E Y +L +
Sbjct: 80 AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 139
Query: 210 LLRNTNFRGV--SLNLTRK------------FSQQLCTALLFLSTPELNIIHCDLKPENI 255
LR G+ S N + FS Q+ + FL++ N IH D+ N+
Sbjct: 140 FLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK--NCIHRDVAARNV 197
Query: 256 LLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLG 310
LL N + KI DFG + + ++ + +PE + Y + D+WS G
Sbjct: 198 LLTNGHVA--KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 255
Query: 311 CILVEMHT 318
+L E+ +
Sbjct: 256 ILLWEIFS 263
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 32/230 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDL-------EEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
D+ + +G+G+FGQVV A + +E VA+K++K+ + + + V +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL-VSEMEM 93
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRKFS 228
M + I+ L L ++ E S NL + LR G+ S ++ R
Sbjct: 94 MKM--IGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 229 QQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
+Q+ L T +L IH DL N+L+ + + +KI DFG + +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLARDINN 209
Query: 279 RIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEV-KLLEIMNKADVNNTYYI-- 183
+G+GSFG+V + D + A+K ++ +EV + E+M A + + +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR----------LEVFRAEELMACAGLTSPRIVPL 131
Query: 184 VRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPE 242
R W N + ELL +L L++ + + + Q L +L +
Sbjct: 132 YGAVREGPWVN---IFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHS-- 184
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSC-----QLGQRIYQ--YI-QSRFYRSPEV 294
I+H D+K +N+LL + A + DFG + LG+ + YI + + +PEV
Sbjct: 185 RRILHGDVKADNVLLSSDGSHA-ALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEV 243
Query: 295 LLGIPYDLAIDMWSLGCILVEMHTG 319
+LG D +D+WS C+++ M G
Sbjct: 244 VLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 36/241 (14%)
Query: 122 EIDSLIGKGSFGQV----VKAFDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEI 171
+I+ +IG G FG+V +K E C VAIK +K ++ FL++A I
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREIC-VAIKTLKAGYTDKQRRDFLSEASI------- 68
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQ 230
M + D N I+ L+ + ++ E + D LR + R + L +
Sbjct: 69 MGQFDHPN---IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RG 124
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF-- 288
+ + + +LS +++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 125 IGSGMKYLS--DMSYVHRDLAARNILVNS--NLVCKVSDFGMSRVLEDDPEAAYTTRGGK 180
Query: 289 ----YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLP 342
+ +PE + + A D+WS G ++ E M GE P + SN+ D + I E LP
Sbjct: 181 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYRLP 239
Query: 343 P 343
P
Sbjct: 240 P 240
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKA----FDLEEQCH-VAIKIIKNK------KPFLNQAQIEVK 167
DR ++ +G+G+FGQV++A D C VA+K++K + +++ +I +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKF 227
+ +N VN + M C L +Y ++ +L + F
Sbjct: 78 IGHHLNV--VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 228 ---------SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
S Q+ + FL++ + IH DL NILL +++ +KI DFG + + +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFGLARDIXK 191
Query: 279 R--IYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 36/241 (14%)
Query: 122 EIDSLIGKGSFGQV----VKAFDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEI 171
+I+ +IG G FG+V +K E C VAIK +K ++ FL++A I
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREIC-VAIKTLKAGYTDKQRRDFLSEASI------- 62
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQ 230
M + D N I+ L+ + ++ E + D LR + R + L +
Sbjct: 63 MGQFDHPN---IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RG 118
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF-- 288
+ + + +LS +++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 119 IGSGMKYLS--DMSYVHRDLAARNILVNS--NLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 289 ----YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIVEVLGLP 342
+ +PE + + A D+WS G ++ E M GE P + SN+ D + I E LP
Sbjct: 175 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYRLP 233
Query: 343 P 343
P
Sbjct: 234 P 234
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 15/218 (6%)
Query: 127 IGKGSFGQVVKA-FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
+G GSFG V + +D V++ + K L+Q + + +N + ++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 186 LKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN 244
L + + +V EL +L D LR + L+R ++ Q+ + +L +
Sbjct: 76 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAEGMGYLESKRF- 132
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF------YRSPEVLLGI 298
IH DL N+LL R +KI DFG L Q Y+ + +PE L
Sbjct: 133 -IHRDLAARNLLLAT--RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 299 PYDLAIDMWSLGCILVEMHT-GEPLFSGSNEVDQMNKI 335
+ A D W G L EM T G+ + G N ++KI
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 15/218 (6%)
Query: 127 IGKGSFGQVVKA-FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
+G GSFG V + +D V++ + K L+Q + + +N + ++R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 186 LKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN 244
L + + +V EL +L D LR + L+R ++ Q+ + +L +
Sbjct: 80 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAEGMGYLESKRF- 136
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF------YRSPEVLLGI 298
IH DL N+LL R +KI DFG L Q Y+ + +PE L
Sbjct: 137 -IHRDLAARNLLLAT--RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 299 PYDLAIDMWSLGCILVEMHT-GEPLFSGSNEVDQMNKI 335
+ A D W G L EM T G+ + G N ++KI
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 15/218 (6%)
Query: 127 IGKGSFGQVVKA-FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
+G GSFG V + +D V++ + K L+Q + + +N + ++R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 186 LKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN 244
L + + +V EL +L D LR + L+R ++ Q+ + +L +
Sbjct: 80 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAEGMGYLESK--R 135
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF------YRSPEVLLGI 298
IH DL N+LL R +KI DFG L Q Y+ + +PE L
Sbjct: 136 FIHRDLAARNLLLAT--RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 299 PYDLAIDMWSLGCILVEMHT-GEPLFSGSNEVDQMNKI 335
+ A D W G L EM T G+ + G N ++KI
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 24/127 (18%)
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY------ 283
Q+ A+ FL + L +H DLKP NI +K+ DFG + Q +
Sbjct: 172 QIAEAVEFLHSKGL--MHRDLKPSNIFFT--MDDVVKVGDFGLVTAMDQDEEEQTVLTPM 227
Query: 284 ---------IQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNK 334
+ ++ Y SPE + G Y +D++SLG IL E+ L+S S +++++
Sbjct: 228 PAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL-----LYSFSTQMERVRI 282
Query: 335 IVEVLGL 341
I +V L
Sbjct: 283 ITDVRNL 289
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 114 GEKFLDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIK--NKKPFLNQAQIEVKLL 169
++L +E +G+G FG V +A + + C+ AIK I+ N++ + EVK L
Sbjct: 1 ASRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKAL 58
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQS 286
F+QQ+C + +L + IH +L N+LL N + +KI DFG + + + ++Y +
Sbjct: 122 FAQQICEGMAYLHAQ--HYIHRNLAARNVLLDNDR--LVKIGDFGLAKAVPEG-HEYYRV 176
Query: 287 R-------FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
R F+ +PE L + A D+WS G L E+ T
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 32/230 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDL-------EEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
D+ + +G+G+FGQVV A + +E VA+K++K+ + + + V +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL-VSEMEM 93
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRKFS 228
M + I+ L L ++ E S NL + LR G+ S ++ R
Sbjct: 94 MKM--IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 229 QQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
+Q+ L T +L IH DL N+L+ + + +KI DFG + +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLARDINN 209
Query: 279 RIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 210 IDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 94/235 (40%), Gaps = 51/235 (21%)
Query: 127 IGKGSFGQVVKAFDLEEQCH----------VAIKIIKNKKPFLNQA-QIEVKLLEIMNKA 175
+G+G+FG+V A +CH VA+K +K Q Q E +LL ++
Sbjct: 49 LGEGAFGKVFLA-----ECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQ 103
Query: 176 DVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG----------------V 219
+ + + R L +VFE + + DL R G +
Sbjct: 104 HIVRFFGVCTEGRP------LLMVFEYMRHG--DLNRFLRSHGPDAKLLAGGEDVAPGPL 155
Query: 220 SLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR 279
L + Q+ +++L+ L+ +H DL N L+ + +KI DFG S +
Sbjct: 156 GLGQLLAVASQVAAGMVYLAG--LHFVHRDLATRNCLV--GQGLVVKIGDFGMSRDIYST 211
Query: 280 IYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEPLFSGSN 327
Y + R + PE +L + D+WS G +L E+ T +P + SN
Sbjct: 212 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 17/121 (14%)
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQS 286
F+QQ+C + +L + IH L N+LL N + +KI DFG + + + ++Y +
Sbjct: 117 FAQQICEGMAYLHAQ--HYIHRALAARNVLLDNDR--LVKIGDFGLAKAVPEG-HEYYRV 171
Query: 287 R-------FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVL 339
R F+ +PE L + A D+WS G L E+ T + SN+ K E++
Sbjct: 172 REDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT----YCDSNQSPH-TKFTELI 226
Query: 340 G 340
G
Sbjct: 227 G 227
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 17/121 (14%)
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQS 286
F+QQ+C + +L + IH L N+LL N + +KI DFG + + + ++Y +
Sbjct: 116 FAQQICEGMAYLHAQ--HYIHRALAARNVLLDNDR--LVKIGDFGLAKAVPEG-HEYYRV 170
Query: 287 R-------FYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVL 339
R F+ +PE L + A D+WS G L E+ T + SN+ K E++
Sbjct: 171 REDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT----YCDSNQSPH-TKFTELI 225
Query: 340 G 340
G
Sbjct: 226 G 226
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG+V + VA+K +K + E L++ + + Y +V
Sbjct: 29 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 86
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E + + +L D L+ + +++N + Q+ + F+ E N
Sbjct: 87 ------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNY 138
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
IH DL+ NIL+ + + KI DFG + + + ++F + +PE + +
Sbjct: 139 IHRDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 302 LAIDMWSLGCILVEMHT 318
+ D+WS G +L E+ T
Sbjct: 197 IKSDVWSFGILLTEIVT 213
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 113/273 (41%), Gaps = 39/273 (14%)
Query: 123 IDSLIGKGSFGQVVKAF--DLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
+ L+G+G+F QV +A DL + + ++K +KP N + + ++M + +
Sbjct: 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP-ANPWEFYIGT-QLMERLKPSMQ 126
Query: 181 YYIVRLKRHFMWRNHLCLVFELLSY----NLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+ ++ +++N LV EL SY N +L +NT + + L F+ ++ +
Sbjct: 127 HMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRM--LYM 184
Query: 237 FLSTPELNIIHCDLKPENILLCNP---------KRSAIKIVDFGSSCQL-----GQRIYQ 282
+ IIH D+KP+N +L N + + ++D G S + G
Sbjct: 185 IEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTA 244
Query: 283 YIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTG--------------EPLFSGSNE 328
++ ++ E+L P++ ID + + + M G E LF
Sbjct: 245 KCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPH 304
Query: 329 VDQMNKIVEV-LGLPPKHLLDGAHKTRKYFDKM 360
+D N+ V L +P H L R+ K+
Sbjct: 305 LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG+V + VA+K +K + E L++ + + Y +V
Sbjct: 17 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 74
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E + + +L D L+ + +++N + Q+ + F+ E N
Sbjct: 75 ------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNY 126
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
IH +L+ NIL+ + + KI DFG + + Y + ++F + +PE + +
Sbjct: 127 IHRNLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 302 LAIDMWSLGCILVEMHT 318
+ D+WS G +L E+ T
Sbjct: 185 IKSDVWSFGILLTEIVT 201
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 46/247 (18%)
Query: 122 EIDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIKN------KKPFLNQAQIEVKLLEIM 172
+I+ +IG G FG+V + + VAIK +K+ ++ FL++A I M
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI-------M 88
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQL 231
+ D N ++ L+ + ++ E + D LR + + + L + +
Sbjct: 89 GQFDHPN---VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML-RGI 144
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS-------------CQLGQ 278
+ +L+ ++N +H DL NIL+ + K+ DFG S LG
Sbjct: 145 AAGMKYLA--DMNYVHRDLAARNILVNS--NLVCKVSDFGLSRFLEDDTSDPTYTSALGG 200
Query: 279 RIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIV 336
+I + +PE + + A D+WS G ++ E M GE P + +N+ D +N I
Sbjct: 201 KI-----PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-DVINAIE 254
Query: 337 EVLGLPP 343
+ LPP
Sbjct: 255 QDYRLPP 261
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG+V + VA+K +K + E L++ + + Y +V
Sbjct: 27 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 84
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E + + +L D L+ + +++N + Q+ + F+ E N
Sbjct: 85 ------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNY 136
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
IH DL+ NIL+ + + KI DFG + + + ++F + +PE + +
Sbjct: 137 IHRDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 302 LAIDMWSLGCILVEMHT 318
+ D+WS G +L E+ T
Sbjct: 195 IKSDVWSFGILLTEIVT 211
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG VVK Q VAIK+IK ++ E K++ ++ + Y +
Sbjct: 17 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 187 KRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+R ++ E ++ L + LR R + L + + +C A+ +L + +
Sbjct: 76 QRPIF------IITEYMANGCLLNYLREMRHRFQTQQLL-EMCKDVCEAMEYLESKQF-- 126
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
+H DL N L+ + + +K+ DFG S + Y + S+F + PEVL+ +
Sbjct: 127 LHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 302 LAIDMWSLGCILVEMHT 318
D+W+ G ++ E+++
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG+V + VA+K +K + E L++ + + Y +V
Sbjct: 30 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 87
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E + + +L D L+ + +++N + Q+ + F+ E N
Sbjct: 88 ------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNY 139
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
IH DL+ NIL+ + + KI DFG + + + ++F + +PE + +
Sbjct: 140 IHRDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 302 LAIDMWSLGCILVEMHT 318
+ D+WS G +L E+ T
Sbjct: 198 IKSDVWSFGILLTEIVT 214
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 36/232 (15%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDL-------EEQCHVAIKIIKN--KKPFLNQAQIEVKLL 169
D+ + +G+G FGQVV A + +E VA+K++K+ + L+ E++++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRK 226
+++ K I+ L L ++ E S NL + LR G+ S ++ R
Sbjct: 141 KMIGKHK-----NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 195
Query: 227 FSQQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 276
+Q+ L T +L IH DL N+L+ + + +KI DFG + +
Sbjct: 196 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLARDI 253
Query: 277 GQRIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 254 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 51/235 (21%)
Query: 127 IGKGSFGQVVKAFDLEEQCH----------VAIKIIKNKKPFLNQA-QIEVKLLEIMNKA 175
+G+G+FG+V A +CH VA+K +K Q Q E +LL ++
Sbjct: 20 LGEGAFGKVFLA-----ECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQ 74
Query: 176 DVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG----------------V 219
+ + + R + +VFE + + DL R G +
Sbjct: 75 HIVRFFGVCTEGRPLL------MVFEYMRHG--DLNRFLRSHGPDAKLLAGGEDVAPGPL 126
Query: 220 SLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR 279
L + Q+ +++L+ L+ +H DL N L+ + +KI DFG S +
Sbjct: 127 GLGQLLAVASQVAAGMVYLAG--LHFVHRDLATRNCLV--GQGLVVKIGDFGMSRDIYST 182
Query: 280 IYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEPLFSGSN 327
Y + R + PE +L + D+WS G +L E+ T +P + SN
Sbjct: 183 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 237
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 51/235 (21%)
Query: 127 IGKGSFGQVVKAFDLEEQCH----------VAIKIIKNKKPFLNQA-QIEVKLLEIMNKA 175
+G+G+FG+V A +CH VA+K +K Q Q E +LL ++
Sbjct: 26 LGEGAFGKVFLA-----ECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQ 80
Query: 176 DVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRG----------------V 219
+ + + R + +VFE + + DL R G +
Sbjct: 81 HIVRFFGVCTEGRPLL------MVFEYMRHG--DLNRFLRSHGPDAKLLAGGEDVAPGPL 132
Query: 220 SLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR 279
L + Q+ +++L+ L+ +H DL N L+ + +KI DFG S +
Sbjct: 133 GLGQLLAVASQVAAGMVYLAG--LHFVHRDLATRNCLV--GQGLVVKIGDFGMSRDIYST 188
Query: 280 IYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEPLFSGSN 327
Y + R + PE +L + D+WS G +L E+ T +P + SN
Sbjct: 189 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 243
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG+V + VA+K +K + E L++ + + Y +V
Sbjct: 21 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 78
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E + + +L D L+ + +++N + Q+ + F+ E N
Sbjct: 79 ------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNY 130
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
IH DL+ NIL+ + + KI DFG + + + ++F + +PE + +
Sbjct: 131 IHRDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 302 LAIDMWSLGCILVEMHT 318
+ D+WS G +L E+ T
Sbjct: 189 IKSDVWSFGILLTEIVT 205
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 32/230 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDL-------EEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
D+ + +G+G+FGQVV A + +E VA+K++K+ + + + V +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL-VSEMEM 93
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRKFS 228
M + I+ L L ++ E S NL + LR G+ S ++ R
Sbjct: 94 MKM--IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 229 QQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
+Q+ L T +L IH DL N+L+ + + ++I DFG + +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMRIADFGLARDINN 209
Query: 279 RIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 33/247 (13%)
Query: 100 EGYDDDNHDYI----IQHGEKF---LDRYEIDSLIGKGSFGQVVKA--FDLEEQCHVAIK 150
E Y+ +++ +I + + EK+ + + +G G+FG+VV+A F L ++ V
Sbjct: 20 ESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV 79
Query: 151 IIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYD 209
+K K + + E + E+ + + IV L + ++ E Y +L +
Sbjct: 80 AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 139
Query: 210 LLRN-------------TNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENIL 256
LR N + +L FS Q+ + FL++ N IH D+ N+L
Sbjct: 140 FLRRKSRVLETDPAFAIANSTASTRDLLH-FSSQVAQGMAFLASK--NCIHRDVAARNVL 196
Query: 257 LCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGC 311
L N + KI DFG + + ++ + +PE + Y + D+WS G
Sbjct: 197 LTNGHVA--KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 312 ILVEMHT 318
+L E+ +
Sbjct: 255 LLWEIFS 261
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 56/263 (21%)
Query: 121 YEIDSLIGKGSFGQV------------VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL 168
Y I IG G +V +K +LEE + + +N+ +LN+ Q
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ----- 112
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS 228
++ I+RL + + ++ +V E + +L L+ + + + +
Sbjct: 113 ---------QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYW 161
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ--- 285
+ + A+ + + I+H DLKP N L+ + +K++DFG + Q+ ++
Sbjct: 162 KNMLEAVHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 286 --SRFYRSPEVLLGIPYD-----------LAIDMWSLGCILVEMHTGE-PLFSGSNEVDQ 331
+ Y PE + + D+WSLGCIL M G+ P N++ +
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 276
Query: 332 MNKI------VEVLGLPPKHLLD 348
++ I +E +P K L D
Sbjct: 277 LHAIIDPNHEIEFPDIPEKDLQD 299
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 32/230 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDL-------EEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
D+ + +G+G FGQVV A + +E VA+K++K+ + + + V +E+
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL-VSEMEM 85
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRKFS 228
M + I+ L L ++ E S NL + LR G+ S ++ R
Sbjct: 86 MKM--IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 143
Query: 229 QQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
+Q+ L T +L IH DL N+L+ + + +KI DFG + +
Sbjct: 144 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLARDINN 201
Query: 279 RIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 202 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 32/230 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDL-------EEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
D+ + +G+G FGQVV A + +E VA+K++K+ + + + V +E+
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL-VSEMEM 82
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRKFS 228
M + I+ L L ++ E S NL + LR G+ S ++ R
Sbjct: 83 MKM--IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 140
Query: 229 QQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
+Q+ L T +L IH DL N+L+ + + +KI DFG + +
Sbjct: 141 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLARDINN 198
Query: 279 RIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 199 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 56/263 (21%)
Query: 121 YEIDSLIGKGSFGQV------------VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL 168
Y I IG G +V +K +LEE + + +N+ +LN+ Q
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ----- 112
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS 228
++ I+RL + + ++ +V E + +L L+ + + + +
Sbjct: 113 ---------QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYW 161
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ--- 285
+ + A+ + + I+H DLKP N L+ + +K++DFG + Q+ ++
Sbjct: 162 KNMLEAVHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 286 --SRFYRSPEVLLGIPYD-----------LAIDMWSLGCILVEMHTGE-PLFSGSNEVDQ 331
+ Y PE + + D+WSLGCIL M G+ P N++ +
Sbjct: 217 VGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 276
Query: 332 MNKI------VEVLGLPPKHLLD 348
++ I +E +P K L D
Sbjct: 277 LHAIIDPNHEIEFPDIPEKDLQD 299
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 56/263 (21%)
Query: 121 YEIDSLIGKGSFGQV------------VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL 168
Y I IG G +V +K +LEE + + +N+ +LN+ Q
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ----- 112
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS 228
++ I+RL + + ++ +V E + +L L+ + + + +
Sbjct: 113 ---------QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYW 161
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ--- 285
+ + A+ + + I+H DLKP N L+ + +K++DFG + Q+ ++
Sbjct: 162 KNMLEAVHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 286 --SRFYRSPEVLLGIPYD-----------LAIDMWSLGCILVEMHTGE-PLFSGSNEVDQ 331
+ Y PE + + D+WSLGCIL M G+ P N++ +
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 276
Query: 332 MNKI------VEVLGLPPKHLLD 348
++ I +E +P K L D
Sbjct: 277 LHAIIDPNHEIEFPDIPEKDLQD 299
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 28/224 (12%)
Query: 119 DRYEIDSLIGKGSFGQVVKA--FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKAD 176
+R +G G+FG+VV+A + L + +K KP + + E + E+ +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLT----------- 224
+ N IV L ++ E Y +L + LR + +
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 225 -----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR 279
FS Q+ + FL++ N IH DL NILL + + + KI DFG + +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARHIKND 221
Query: 280 IYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
++ + +PE + Y D+WS G L E+ +
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 109 YIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDL-----EEQCHVAIKIIKNKKPFLNQAQ 163
Y+ E ++ + +G+GSFG V + E + VAIK + N+A
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 67
Query: 164 IEVKLLEIMNKADVN---NTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR------- 212
+ +E +N+A V N +++VRL ++ EL++ +L LR
Sbjct: 68 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 127
Query: 213 -NTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG 271
N SL+ + + ++ + +L+ + +H DL N ++ + +KI DFG
Sbjct: 128 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 183
Query: 272 SSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ + + Y + + SPE L + D+WS G +L E+ T
Sbjct: 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 109 YIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDL-----EEQCHVAIKIIKNKKPFLNQAQ 163
Y+ E ++ + +G+GSFG V + E + VAIK + N+A
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 67
Query: 164 IEVKLLEIMNKADVN---NTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR------- 212
+ +E +N+A V N +++VRL ++ EL++ +L LR
Sbjct: 68 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMA 127
Query: 213 -NTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG 271
N SL+ + + ++ + +L+ + +H DL N ++ + +KI DFG
Sbjct: 128 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 183
Query: 272 SSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ + + Y + + SPE L + D+WS G +L E+ T
Sbjct: 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKA----FDLEEQCH-VAIKIIKNK------KPFLNQAQIEVK 167
DR ++ +G+G+FGQV++A D C VA+K++K + +++ +I +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKF 227
+ +N VN + M C L +Y ++ +L + F
Sbjct: 87 IGHHLNV--VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 228 ---------SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
S Q+ + FL++ + IH DL NILL +++ +KI DFG + + +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFGLARDIXK 200
Query: 279 R--IYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 32/230 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDL-------EEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
D+ + +G+G FGQVV A + +E VA+K++K+ + + + V +E+
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL-VSEMEM 80
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRKFS 228
M + I+ L L ++ E S NL + LR G+ S ++ R
Sbjct: 81 MKM--IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 138
Query: 229 QQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
+Q+ L T +L IH DL N+L+ + + +KI DFG + +
Sbjct: 139 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVT--ENNVMKIADFGLARDINN 196
Query: 279 RIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 197 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG+V + VA+K +K + E L++ + + Y +V
Sbjct: 23 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 80
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E + + +L D L+ + +++N + Q+ + F+ E N
Sbjct: 81 ------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNY 132
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
IH DL+ NIL+ + + KI DFG + + + ++F + +PE + +
Sbjct: 133 IHRDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 302 LAIDMWSLGCILVEMHT 318
+ D+WS G +L E+ T
Sbjct: 191 IKSDVWSFGILLTEIVT 207
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKA----FDLEEQCH-VAIKIIKNK------KPFLNQAQIEVK 167
DR ++ +G+G+FGQV++A D C VA+K++K + +++ +I +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKF 227
+ +N VN + M C L +Y ++ +L + F
Sbjct: 78 IGHHLNV--VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 228 ---------SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
S Q+ + FL++ + IH DL NILL +++ +KI DFG + + +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFGLARDIXK 191
Query: 279 R--IYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 28/224 (12%)
Query: 119 DRYEIDSLIGKGSFGQVVKA--FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKAD 176
+R +G G+FG+VV+A + L + +K KP + + E + E+ +
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLT----------- 224
+ N IV L ++ E Y +L + LR + +
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 225 -----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR 279
FS Q+ + FL++ N IH DL NILL + + + KI DFG + +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARDIKND 198
Query: 280 IYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
++ + +PE + Y D+WS G L E+ +
Sbjct: 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 28/224 (12%)
Query: 119 DRYEIDSLIGKGSFGQVVKA--FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKAD 176
+R +G G+FG+VV+A + L + +K KP + + E + E+ +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLT----------- 224
+ N IV L ++ E Y +L + LR + +
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 225 -----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR 279
FS Q+ + FL++ N IH DL NILL + + + KI DFG + +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARDIKND 221
Query: 280 IYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
++ + +PE + Y D+WS G L E+ +
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG+V + VA+K +K + E L++ + + Y +V
Sbjct: 22 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 79
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E + + +L D L+ + +++N + Q+ + F+ E N
Sbjct: 80 ------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNY 131
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
IH DL+ NIL+ + + KI DFG + + + ++F + +PE + +
Sbjct: 132 IHRDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 302 LAIDMWSLGCILVEMHT 318
+ D+WS G +L E+ T
Sbjct: 190 IKSDVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G FG+V + VA+K +K + E L++ + + Y +V
Sbjct: 21 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 78
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E + + +L D L+ + +++N + Q+ + F+ E N
Sbjct: 79 ------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNY 130
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-SRF---YRSPEVLLGIPYD 301
IH DL+ NIL+ + + KI DFG + + + ++F + +PE + +
Sbjct: 131 IHRDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 302 LAIDMWSLGCILVEMHT 318
+ D+WS G +L E+ T
Sbjct: 189 IKSDVWSFGILLTEIVT 205
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 32/230 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDL-------EEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
D+ + +G+G+FGQVV A + +E VA+K++K+ + + + V +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL-VSEMEM 93
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRKFS 228
M + I+ L L ++ E S NL + LR G+ S ++ R
Sbjct: 94 MKM--IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPE 151
Query: 229 QQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
+Q+ L T +L IH DL N+L+ + + +KI DFG + +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLARDINN 209
Query: 279 --RIYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
+ R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 32/230 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDL-------EEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
D+ + +G+G+FGQVV A + +E VA+K++K+ + + + V +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL-VSEMEM 93
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRKFS 228
M + I+ L L ++ E S NL + LR G+ S ++ R
Sbjct: 94 MKM--IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 229 QQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
+Q+ L T +L IH DL N+L+ + + +KI DFG + +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLARDINN 209
Query: 279 --RIYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
+ R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 28/224 (12%)
Query: 119 DRYEIDSLIGKGSFGQVVKA--FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKAD 176
+R +G G+FG+VV+A + L + +K KP + + E + E+ +
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLT----------- 224
+ N IV L ++ E Y +L + LR + +
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 225 -----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR 279
FS Q+ + FL++ N IH DL NILL + + + KI DFG + +
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARDIKND 214
Query: 280 IYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
++ + +PE + Y D+WS G L E+ +
Sbjct: 215 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 28/224 (12%)
Query: 119 DRYEIDSLIGKGSFGQVVKA--FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKAD 176
+R +G G+FG+VV+A + L + +K KP + + E + E+ +
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLT----------- 224
+ N IV L ++ E Y +L + LR + +
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 225 -----RKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR 279
FS Q+ + FL++ N IH DL NILL + + + KI DFG + +
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARDIKND 216
Query: 280 IYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
++ + +PE + Y D+WS G L E+ +
Sbjct: 217 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 109 YIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDL-----EEQCHVAIKIIKNKKPFLNQAQ 163
Y+ E ++ + +G+GSFG V + E + VAIK + N+A
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 61
Query: 164 IEVKLLEIMNKADVN---NTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR------- 212
+ +E +N+A V N +++VRL ++ EL++ +L LR
Sbjct: 62 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 121
Query: 213 -NTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG 271
N SL+ + + ++ + +L+ + +H DL N ++ + +KI DFG
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 177
Query: 272 SSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ + + Y + + SPE L + D+WS G +L E+ T
Sbjct: 178 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 115/274 (41%), Gaps = 39/274 (14%)
Query: 100 EGYDDDNHDYIIQHGEKFLDR--YEIDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK- 153
E Y+D N + K LD +I+ +IG G FG+V + VAIK +K
Sbjct: 24 ETYEDPNR--AVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKV 81
Query: 154 -----NKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLY 208
++ FL +A I M + D N +V L+ + +V E +
Sbjct: 82 GYTEKQRRDFLCEASI-------MGQFDHPN---VVHLEGVVTRGKPVMIVIEFMENGAL 131
Query: 209 D-LLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKI 267
D LR + + + L + + + +L+ ++ +H DL NIL+ + K+
Sbjct: 132 DAFLRKHDGQFTVIQLVGML-RGIAAGMRYLA--DMGYVHRDLAARNILVNS--NLVCKV 186
Query: 268 VDFGSSCQLG---QRIYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE 320
DFG S + + +Y + + +PE + + A D+WS G ++ E M GE
Sbjct: 187 SDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 246
Query: 321 -PLFSGSNEVDQMNKIVEVLGLP-PKHLLDGAHK 352
P + SN+ D + I E LP P G H+
Sbjct: 247 RPYWDMSNQ-DVIKAIEEGYRLPAPMDCPAGLHQ 279
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 109 YIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDL-----EEQCHVAIKIIKNKKPFLNQAQ 163
Y+ E ++ + +G+GSFG V + E + VAIK + N+A
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 60
Query: 164 IEVKLLEIMNKADVN---NTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR------- 212
+ +E +N+A V N +++VRL ++ EL++ +L LR
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 213 -NTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG 271
N SL+ + + ++ + +L+ + +H DL N ++ + +KI DFG
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 176
Query: 272 SSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ + + Y + + SPE L + D+WS G +L E+ T
Sbjct: 177 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 19/222 (8%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADV--NNTYYIV 184
+G+G++G V K + A+K I+ Q ++ L D T+Y
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 185 RLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSL--NLTRKFSQQLCTALLFLSTPE 242
+ +W + EL +L + +G ++ ++ K + + AL L + +
Sbjct: 102 LFREGDVW-----ICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-K 155
Query: 243 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQS--RFYRSPE----VLL 296
L++IH D+KP N+L+ +K DFG S L + + I + + Y +PE L
Sbjct: 156 LSVIHRDVKPSNVLIN--ALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELN 213
Query: 297 GIPYDLAIDMWSLGCILVEMHTGE-PLFSGSNEVDQMNKIVE 337
Y + D+WSLG +E+ P S Q+ ++VE
Sbjct: 214 QKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE 255
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 91/220 (41%), Gaps = 46/220 (20%)
Query: 126 LIGKGSFGQVVKAFDLEE--QCHVAIKIIK------NKKPFLNQAQIEVKLLEIMNKADV 177
+IG+G+FGQV+KA ++ + AIK +K + + F + ++ KL N
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN---- 87
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR--------------NTNFRGVSLN 222
I+ L R +L L E + NL D LR N+ +S
Sbjct: 88 -----IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 223 LTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ 282
F+ + + +LS + IH DL NIL+ + KI DFG S GQ +
Sbjct: 143 QLLHFAADVARGMDYLSQKQF--IHRDLAARNILV--GENYVAKIADFGLS--RGQEV-- 194
Query: 283 YIQSRFYRSPEVLLGIP------YDLAIDMWSLGCILVEM 316
Y++ R P + I Y D+WS G +L E+
Sbjct: 195 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 234
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 109 YIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDL-----EEQCHVAIKIIKNKKPFLNQAQ 163
Y+ E ++ + +G+GSFG V + E + VAIK + N+A
Sbjct: 5 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 57
Query: 164 IEVKLLEIMNKADVN---NTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR------- 212
+ +E +N+A V N +++VRL ++ EL++ +L LR
Sbjct: 58 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMA 117
Query: 213 -NTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG 271
N SL+ + + ++ + +L+ + +H DL N ++ + +KI DFG
Sbjct: 118 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 173
Query: 272 SSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ + + Y + + SPE L + D+WS G +L E+ T
Sbjct: 174 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Query: 194 NHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPE 253
N + L+ E L N ++L K++ Q+C + +L + + +H DL
Sbjct: 98 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY--VHRDLAAR 155
Query: 254 NILLCNPKRSAIKIVDFG--SSCQLGQRIYQYIQSR----FYRSPEVLLGIPYDLAIDMW 307
N+L+ +KI DFG + + + R F+ +PE L+ + +A D+W
Sbjct: 156 NVLV--ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213
Query: 308 SLGCILVEMHT 318
S G L E+ T
Sbjct: 214 SFGVTLHELLT 224
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 31/240 (12%)
Query: 126 LIGKGSFGQVVKAFDLEE----QCHVAIKIIK-NKKPFLNQAQIEVKLLEIMNKADVN-- 178
++G G+FG V K + + + VAIK+++ N P N+ EI+++A V
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK--------EILDEAYVMAG 75
Query: 179 -NTYYIVRLKRHFMWRNHLCLVFELLSYN-LYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
+ Y+ RL + + + LV +L+ Y L D +R R S +L + Q+ +
Sbjct: 76 VGSPYVSRLLGICL-TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLL-NWCMQIAKGMS 133
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS--CQLGQRIYQYIQSRF---YRS 291
+L ++ ++H DL N+L+ +P +KI DFG + + + Y + + +
Sbjct: 134 YLE--DVRLVHRDLAARNVLVKSPNH--VKITDFGLARLLDIDETEYHADGGKVPIKWMA 189
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHT-GEPLFSG--SNEVDQMNKIVEVLGLPPKHLLD 348
E +L + D+WS G + E+ T G + G + E+ + + E L PP +D
Sbjct: 190 LESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTID 249
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 32/230 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDL-------EEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
D+ + +G+G+FGQVV A + +E VA+K++K+ + + + V +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL-VSEMEM 93
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRKFS 228
M + I+ L L ++ S NL + LR G+ S ++ R
Sbjct: 94 MKM--IGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 229 QQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
+Q+ L T +L IH DL N+L+ + + +KI DFG + +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLARDINN 209
Query: 279 RIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 109 YIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDL-----EEQCHVAIKIIKNKKPFLNQAQ 163
Y+ E ++ + +G+GSFG V + E + VAIK + N+A
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 60
Query: 164 IEVKLLEIMNKADVN---NTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR------- 212
+ +E +N+A V N +++VRL ++ EL++ +L LR
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 213 -NTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG 271
N SL+ + + ++ + +L+ + +H DL N ++ + +KI DFG
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 176
Query: 272 SSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ + + Y + + SPE L + D+WS G +L E+ T
Sbjct: 177 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 43/217 (19%)
Query: 125 SLIGKGSFGQVVKAFDLEEQCH-----------VAIKIIKNKKPFLNQA-QIEVKLLEIM 172
S +GKG+FG V E C VA+K +++ P + Q E+++L+ +
Sbjct: 13 SQLGKGNFGSV-------ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL 65
Query: 173 NKADVNNTYYIVRLK--RHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRK--F 227
+ + +IV+ + + R L LV E L S L D L+ R L+ +R +
Sbjct: 66 H------SDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLY 116
Query: 228 SQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-----GQRIYQ 282
S Q+C + +L + +H DL NIL+ + +KI DFG + L + +
Sbjct: 117 SSQICKGMEYLGS--RRCVHRDLAARNILV--ESEAHVKIADFGLAKLLPLDKDXXVVRE 172
Query: 283 YIQSR-FYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
QS F+ +PE L + D+WS G +L E+ T
Sbjct: 173 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 91/220 (41%), Gaps = 46/220 (20%)
Query: 126 LIGKGSFGQVVKAFDLEE--QCHVAIKIIK------NKKPFLNQAQIEVKLLEIMNKADV 177
+IG+G+FGQV+KA ++ + AIK +K + + F + ++ KL N
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN---- 77
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR--------------NTNFRGVSLN 222
I+ L R +L L E + NL D LR N+ +S
Sbjct: 78 -----IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 223 LTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ 282
F+ + + +LS + IH DL NIL+ + KI DFG S GQ +
Sbjct: 133 QLLHFAADVARGMDYLSQKQF--IHRDLAARNILV--GENYVAKIADFGLS--RGQEV-- 184
Query: 283 YIQSRFYRSPEVLLGIP------YDLAIDMWSLGCILVEM 316
Y++ R P + I Y D+WS G +L E+
Sbjct: 185 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 224
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 56/263 (21%)
Query: 121 YEIDSLIGKGSFGQV------------VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL 168
Y I IG G +V +K +LEE + + +N+ +LN+ Q
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ----- 65
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS 228
++ I+RL + + ++ +V E + +L L+ + + + +
Sbjct: 66 ---------QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYW 114
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ--- 285
+ + A+ + + I+H DLKP N L+ + +K++DFG + Q+ ++
Sbjct: 115 KNMLEAVHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQ 169
Query: 286 --SRFYRSPEVLLGIPYD-----------LAIDMWSLGCILVEMHTGE-PLFSGSNEVDQ 331
+ Y PE + + D+WSLGCIL M G+ P N++ +
Sbjct: 170 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 229
Query: 332 MNKI------VEVLGLPPKHLLD 348
++ I +E +P K L D
Sbjct: 230 LHAIIDPNHEIEFPDIPEKDLQD 252
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 105/255 (41%), Gaps = 40/255 (15%)
Query: 100 EGYDDDNHDYI----IQHGEKF---LDRYEIDSLIGKGSFGQVVKA--FDLEEQCHVAIK 150
E Y+ +++ +I + + EK+ + + +G G+FG+VV+A F L ++ V
Sbjct: 5 ESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV 64
Query: 151 IIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYD 209
+K K + + E + E+ + + IV L + ++ E Y +L +
Sbjct: 65 AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 124
Query: 210 LLR---------------------NTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHC 248
LR + R + L FS Q+ + FL++ N IH
Sbjct: 125 FLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK--NCIHR 182
Query: 249 DLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLA 303
D+ N+LL N + KI DFG + + ++ + +PE + Y +
Sbjct: 183 DVAARNVLLTNGHVA--KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 240
Query: 304 IDMWSLGCILVEMHT 318
D+WS G +L E+ +
Sbjct: 241 SDVWSYGILLWEIFS 255
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 33/214 (15%)
Query: 127 IGKGSFGQVVKAFDL-----EEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN--- 178
+G+GSFG V + E + VAIK + N+A + +E +N+A V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRERIEFLNEASVMKEF 72
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR--------NTNFRGVSLNLTRKFSQ 229
N +++VRL ++ EL++ +L LR N SL+ + +
Sbjct: 73 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 132
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF- 288
++ + +L+ + +H DL N ++ + +KI DFG + + + Y +
Sbjct: 133 EIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETDYYRKGGKGL 188
Query: 289 ----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ SPE L + D+WS G +L E+ T
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 42/230 (18%)
Query: 119 DRYEIDSLIGKGSFGQVVKA----FDLEEQCH-VAIKIIKNK------KPFLNQAQIEVK 167
DR + +G+G+FGQV++A D C VA+K++K + +++ +I
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI--- 84
Query: 168 LLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV------- 219
L+ I + +V N L L ++ E + NL LR+ V
Sbjct: 85 LIHIGHHLNVVNL-----LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPED 139
Query: 220 ------SLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS 273
+L +S Q+ + FL++ + IH DL NILL +++ +KI DFG +
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFGLA 195
Query: 274 CQLGQR--IYQYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ + + +R + +PE + Y + D+WS G +L E+ +
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 33/214 (15%)
Query: 127 IGKGSFGQVVKAFDL-----EEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN--- 178
+G+GSFG V + E + VAIK + N+A + +E +N+A V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRERIEFLNEASVMKEF 76
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR--------NTNFRGVSLNLTRKFSQ 229
N +++VRL ++ EL++ +L LR N SL+ + +
Sbjct: 77 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 136
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF- 288
++ + +L+ + +H DL N ++ + +KI DFG + + + Y +
Sbjct: 137 EIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETDYYRKGGKGL 192
Query: 289 ----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ SPE L + D+WS G +L E+ T
Sbjct: 193 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 109 YIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDL-----EEQCHVAIKIIKNKKPFLNQAQ 163
Y+ E ++ + +G+GSFG V + E + VAIK + N+A
Sbjct: 37 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 89
Query: 164 IEVKLLEIMNKADVN---NTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR------- 212
+ +E +N+A V N +++VRL ++ EL++ +L LR
Sbjct: 90 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 149
Query: 213 -NTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG 271
N SL+ + + ++ + +L+ + +H DL N ++ + +KI DFG
Sbjct: 150 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 205
Query: 272 SSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ + + Y + + SPE L + D+WS G +L E+ T
Sbjct: 206 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Query: 194 NHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPE 253
N + L+ E L N ++L K++ Q+C + +L + + +H DL
Sbjct: 86 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY--VHRDLAAR 143
Query: 254 NILLCNPKRSAIKIVDFG--SSCQLGQRIYQYIQSR----FYRSPEVLLGIPYDLAIDMW 307
N+L+ +KI DFG + + + R F+ +PE L+ + +A D+W
Sbjct: 144 NVLV--ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVW 201
Query: 308 SLGCILVEMHT 318
S G L E+ T
Sbjct: 202 SFGVTLHELLT 212
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 32/230 (13%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDL-------EEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
D+ + +G+G+FGQVV A + +E VA+K++K+ + + + V +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL-VSEMEM 93
Query: 172 MNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRKFS 228
M + I+ L L ++ S NL + LR G+ S ++ R
Sbjct: 94 MKM--IGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 229 QQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
+Q+ L T +L IH DL N+L+ + + +KI DFG + +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLARDINN 209
Query: 279 RIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G ++ E+ T G P
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 14/102 (13%)
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL------GQR-IYQYIQSRFYRSPEV 294
E NI H D+KP NIL+ K +K+ DFG S + G R Y+++ F+ +
Sbjct: 170 EKNICHRDVKPSNILM--DKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESS 227
Query: 295 LLGIPYDLAIDMWSLG-CILVEMHTGEPLFSGSNEVDQMNKI 335
G +D+WSLG C+ V + P + V+ N I
Sbjct: 228 YNG----AKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 102/246 (41%), Gaps = 50/246 (20%)
Query: 121 YEIDSLIGKGSFGQV------------VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL 168
Y I IG G +V +K +LEE + + +N+ +LN+ Q
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ----- 84
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS 228
++ I+RL + + ++ +V E + +L L+ + + + +
Sbjct: 85 ---------QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYW 133
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ--- 285
+ + A+ + + I+H DLKP N L+ + +K++DFG + Q+ ++
Sbjct: 134 KNMLEAVHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQ 188
Query: 286 --SRFYRSPEVLLGIPYD-----------LAIDMWSLGCILVEMHTGE-PLFSGSNEVDQ 331
+ Y PE + + D+WSLGCIL M G+ P N++ +
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 248
Query: 332 MNKIVE 337
++ I++
Sbjct: 249 LHAIID 254
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 17/101 (16%)
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---Y 283
+S Q+ + FL++ + IH DL NILL +++ +KI DFG L + IY+ Y
Sbjct: 196 YSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFG----LARDIYKDPDY 247
Query: 284 IQ---SRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
++ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 248 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 119 DRYEIDSLIGKGSFGQVVKA----FDLEEQCH-VAIKIIKN 154
DR ++ +G+G+FGQV++A D C VA+K++K
Sbjct: 20 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE 60
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 17/101 (16%)
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---Y 283
+S Q+ + FL++ + IH DL NILL +++ +KI DFG L + IY+ Y
Sbjct: 205 YSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFG----LARDIYKDPDY 256
Query: 284 IQ---SRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
++ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 257 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 119 DRYEIDSLIGKGSFGQVVKA----FDLEEQCH-VAIKIIKN 154
DR ++ +G+G+FGQV++A D C VA+K++K
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE 69
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 17/101 (16%)
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---Y 283
+S Q+ + FL++ + IH DL NILL +++ +KI DFG L + IY+ Y
Sbjct: 203 YSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFG----LARDIYKDPDY 254
Query: 284 IQ---SRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
++ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 255 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 119 DRYEIDSLIGKGSFGQVVKA----FDLEEQCH-VAIKIIKN 154
DR ++ +G+G+FGQV++A D C VA+K++K
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE 67
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 102/246 (41%), Gaps = 50/246 (20%)
Query: 121 YEIDSLIGKGSFGQV------------VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL 168
Y I IG G +V +K +LEE + + +N+ +LN+ Q
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ----- 84
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS 228
++ I+RL + + ++ +V E + +L L+ + + + +
Sbjct: 85 ---------QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYW 133
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ--- 285
+ + A+ + + I+H DLKP N L+ + +K++DFG + Q+ ++
Sbjct: 134 KNMLEAVHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDXXXVVKDSQ 188
Query: 286 --SRFYRSPEVLLGIPYD-----------LAIDMWSLGCILVEMHTGE-PLFSGSNEVDQ 331
+ Y PE + + D+WSLGCIL M G+ P N++ +
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 248
Query: 332 MNKIVE 337
++ I++
Sbjct: 249 LHAIID 254
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 17/101 (16%)
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---Y 283
+S Q+ + FL++ + IH DL NILL +++ +KI DFG L + IY+ Y
Sbjct: 198 YSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFG----LARDIYKDPDY 249
Query: 284 IQ---SRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
++ +R + +PE + Y + D+WS G +L E+ +
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 119 DRYEIDSLIGKGSFGQVVKA----FDLEEQCH-VAIKIIKN 154
DR ++ +G+G+FGQV++A D C VA+K++K
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE 62
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 102/246 (41%), Gaps = 50/246 (20%)
Query: 121 YEIDSLIGKGSFGQV------------VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL 168
Y I IG G +V +K +LEE + + +N+ +LN+ Q
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ----- 68
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS 228
++ I+RL + + ++ +V E + +L L+ + + + +
Sbjct: 69 ---------QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYW 117
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ--- 285
+ + A+ + + I+H DLKP N L+ + +K++DFG + Q+ ++
Sbjct: 118 KNMLEAVHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQ 172
Query: 286 --SRFYRSPEVLLGIPYD-----------LAIDMWSLGCILVEMHTGE-PLFSGSNEVDQ 331
+ Y PE + + D+WSLGCIL M G+ P N++ +
Sbjct: 173 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 232
Query: 332 MNKIVE 337
++ I++
Sbjct: 233 LHAIID 238
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 111 IQHGEKFLDRYEI---DSLIGKGSFGQVVKAF--DLEEQCHVAIKIIKNKKPFLNQAQIE 165
I+ E +LDR + D +G G+FG V K + + VA+KI+KN+ N ++
Sbjct: 358 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 414
Query: 166 VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTR 225
+LL N + YIVR+ LV E+ + N R V
Sbjct: 415 DELLAEANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQN-RHVKDKNII 472
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYI 284
+ Q+ + +L E N +H DL N+LL + KI DFG S L Y
Sbjct: 473 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKA 528
Query: 285 QSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT-GEPLFSG--SNEVDQMNKIV 336
Q+ + +PE + + D+WS G ++ E + G+ + G +EV M +
Sbjct: 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 588
Query: 337 EVLGLP---PKHLLD 348
E +G P P+ + D
Sbjct: 589 ERMGCPAGCPREMYD 603
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 111 IQHGEKFLDRYEI---DSLIGKGSFGQVVKAF--DLEEQCHVAIKIIKNKKPFLNQAQIE 165
I+ E +LDR + D +G G+FG V K + + VA+KI+KN+ N ++
Sbjct: 359 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 415
Query: 166 VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTR 225
+LL N + YIVR+ LV E+ + N R V
Sbjct: 416 DELLAEANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQN-RHVKDKNII 473
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYI 284
+ Q+ + +L E N +H DL N+LL + KI DFG S L Y
Sbjct: 474 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKA 529
Query: 285 QSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT-GEPLFSG--SNEVDQMNKIV 336
Q+ + +PE + + D+WS G ++ E + G+ + G +EV M +
Sbjct: 530 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 589
Query: 337 EVLGLP---PKHLLD 348
E +G P P+ + D
Sbjct: 590 ERMGCPAGCPREMYD 604
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 15/218 (6%)
Query: 127 IGKGSFGQVVKA-FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
+G GSFG V + +D V++ + K L+Q + + +N + ++R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 186 LKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN 244
L + + +V EL +L D LR + L+R ++ Q+ + +L +
Sbjct: 86 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAEGMGYLESK--R 141
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF------YRSPEVLLGI 298
IH DL N+LL R +KI DFG L Q + + +PE L
Sbjct: 142 FIHRDLAARNLLLAT--RDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 299 PYDLAIDMWSLGCILVEMHT-GEPLFSGSNEVDQMNKI 335
+ A D W G L EM T G+ + G N ++KI
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 102/246 (41%), Gaps = 50/246 (20%)
Query: 121 YEIDSLIGKGSFGQV------------VKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKL 168
Y I IG G +V +K +LEE + + +N+ +LN+ Q
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ----- 64
Query: 169 LEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFS 228
++ I+RL + + ++ +V E + +L L+ + + + +
Sbjct: 65 ---------QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYW 113
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ--- 285
+ + A+ + + I+H DLKP N L+ + +K++DFG + Q+ ++
Sbjct: 114 KNMLEAVHTIH--QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQ 168
Query: 286 --SRFYRSPEVLLGIPYD-----------LAIDMWSLGCILVEMHTGE-PLFSGSNEVDQ 331
+ Y PE + + D+WSLGCIL M G+ P N++ +
Sbjct: 169 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 228
Query: 332 MNKIVE 337
++ I++
Sbjct: 229 LHAIID 234
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 124 DSLIGKGSFGQVVKAF--DLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
D +G G+FG V + ++Q VAIK++K + ++ ++ +IM++ D
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEM-MREAQIMHQLD---NP 396
Query: 182 YIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
YIVRL L LV E+ + ++ + Q+ + +L
Sbjct: 397 YIVRLI-GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE-- 453
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF------YRSPEVL 295
E N +H +L N+LL N R KI DFG S LG Y + +PE +
Sbjct: 454 EKNFVHRNLAARNVLLVN--RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 511
Query: 296 LGIPYDLAIDMWSLGCILVE 315
+ D+WS G + E
Sbjct: 512 NFRKFSSRSDVWSYGVTMWE 531
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 15/218 (6%)
Query: 127 IGKGSFGQVVKA-FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVR 185
+G GSFG V + +D V++ + K L+Q + + +N + ++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 186 LKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN 244
L + + +V EL +L D LR + L+R ++ Q+ + +L +
Sbjct: 76 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAEGMGYLESK--R 131
Query: 245 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF------YRSPEVLLGI 298
IH DL N+LL R +KI DFG L Q + + +PE L
Sbjct: 132 FIHRDLAARNLLLAT--RDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 299 PYDLAIDMWSLGCILVEMHT-GEPLFSGSNEVDQMNKI 335
+ A D W G L EM T G+ + G N ++KI
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 33/214 (15%)
Query: 127 IGKGSFGQVVK--AFDL---EEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
+G+GSFG V + A D+ E + VA+K + N++ + +E +N+A V +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 182 ---YIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR--------NTNFRGVSLNLTRKFSQ 229
++VRL +V EL+++ +L LR N +L + +
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF- 288
++ + +L+ + +H DL N ++ + +KI DFG + + + Y +
Sbjct: 138 EIADGMAYLNAKKF--VHRDLAARNCMVAH--DFTVKIGDFGMTRDIYETAYYRKGGKGL 193
Query: 289 ----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ +PE L + + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 83/216 (38%), Gaps = 24/216 (11%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG G FG V K + C AIK ++KKP + L E+ A + ++VR
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 187 KRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQ---QLCTALLFLSTPEL 243
+ +H+ + E + + N+R +S + Q+ L ++ + +
Sbjct: 73 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS--M 130
Query: 244 NIIHCDLKPENILLCN-----------------PKRSAIKIVDFGSSCQLGQRIYQYIQS 286
+++H D+KP NI + + KI D G ++ + S
Sbjct: 131 SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 190
Query: 287 RFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPL 322
RF + + + D+++L +V EPL
Sbjct: 191 RFLANEVLQENYTHLPKADIFALALTVVXAAGAEPL 226
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 33/232 (14%)
Query: 109 YIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDL-----EEQCHVAIKIIKNKKPFLNQAQ 163
Y+ E ++ + +G+GSFG V + E + VAIK + N+A
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 61
Query: 164 IEVKLLEIMNKADVN---NTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR------- 212
+ +E +N+A V N +++VRL ++ EL++ +L LR
Sbjct: 62 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 121
Query: 213 -NTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG 271
N SL+ + + ++ + +L+ + +H DL N ++ + +KI DFG
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 177
Query: 272 SSCQLGQ-----RIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ + + + + + + SPE L + D+WS G +L E+ T
Sbjct: 178 MTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 247 HCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQY---IQSRFYRSPEVLLGIPYDL 302
H D+KPENIL+ + +VDFG +S +++ Q + + +Y +PE
Sbjct: 157 HRDVKPENILVSADDFA--YLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 303 AIDMWSLGCILVEMHTGEPLFSG 325
D+++L C+L E TG P + G
Sbjct: 215 RADIYALTCVLYECLTGSPPYQG 237
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 124 DSLIGKGSFGQVVKAF--DLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
D +G G+FG V + ++Q VAIK++K + ++ ++ +IM++ D
Sbjct: 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEM-MREAQIMHQLD---NP 70
Query: 182 YIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTP 241
YIVRL L LV E+ + ++ + Q+ + +L
Sbjct: 71 YIVRLI-GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE-- 127
Query: 242 ELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF------YRSPEVL 295
E N +H DL N+LL N R KI DFG S LG Y + +PE +
Sbjct: 128 EKNFVHRDLAARNVLLVN--RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 185
Query: 296 LGIPYDLAIDMWSLGCILVE 315
+ D+WS G + E
Sbjct: 186 NFRKFSSRSDVWSYGVTMWE 205
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 110/242 (45%), Gaps = 48/242 (19%)
Query: 127 IGKGSFGQVVKA--FDL---EEQCHVAIKIIKN-----KKPFLNQAQIEVKLLEIMNKAD 176
+G+G+FG+V A ++L +++ VA+K +K+ +K F +A++ L
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-------- 72
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSL-------NLTRK-- 226
+IV+ + + L +VFE + + +L LR V + LT+
Sbjct: 73 --QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQM 130
Query: 227 --FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYI 284
+QQ+ +++L++ + +H DL N L+ + +KI DFG S + Y +
Sbjct: 131 LHIAQQIAAGMVYLASQ--HFVHRDLATRNCLV--GENLLVKIGDFGMSRDVYSTDYYRV 186
Query: 285 QSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEPLFSGSNEVDQMNKIVE 337
+ PE ++ + D+WSLG +L E+ T +P + SN N+++E
Sbjct: 187 GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-----NEVIE 241
Query: 338 VL 339
+
Sbjct: 242 CI 243
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 97/232 (41%), Gaps = 33/232 (14%)
Query: 109 YIIQHGEKFLDRYEIDSLIGKGSFGQVVKAFDL-----EEQCHVAIKIIKNKKPFLNQAQ 163
Y+ E ++ + +G+GSFG V + E + VAIK + N+A
Sbjct: 2 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 54
Query: 164 IEVKLLEIMNKADVN---NTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR------- 212
+ +E +N+A V N +++VRL ++ EL++ +L LR
Sbjct: 55 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 114
Query: 213 -NTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFG 271
N SL+ + + ++ + +L+ + +H DL N + + +KI DFG
Sbjct: 115 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCXVA--EDFTVKIGDFG 170
Query: 272 SSCQLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ + + Y + + SPE L + D+WS G +L E+ T
Sbjct: 171 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 33/214 (15%)
Query: 127 IGKGSFGQVVK--AFDL---EEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
+G+GSFG V + A D+ E + VA+K + N++ + +E +N+A V +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 76
Query: 182 ---YIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR--------NTNFRGVSLNLTRKFSQ 229
++VRL +V EL+++ +L LR N +L + +
Sbjct: 77 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF- 288
++ + +L+ + +H DL N ++ + +KI DFG + + + Y +
Sbjct: 137 EIADGMAYLNAKKF--VHRDLAARNCMVAH--DFTVKIGDFGMTRDIYETDYYRKGGKGL 192
Query: 289 ----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ +PE L + + DMWS G +L E+ +
Sbjct: 193 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 27/202 (13%)
Query: 126 LIGKGSFGQVV--KAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYI 183
++G G+ G +V FD + VA+K I + + A EV+LL ++ Y+
Sbjct: 31 VLGHGAEGTIVYRGMFDNRD---VAVKRILPE--CFSFADREVQLLRESDEHPNVIRYFC 85
Query: 184 VRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPEL 243
R F + + EL + L + + +F + L QQ + L L + L
Sbjct: 86 TEKDRQFQY-----IAIELCAATLQEYVEQKDFAHLGLEPI-TLLQQTTSGLAHLHS--L 137
Query: 244 NIIHCDLKPENILLCNPK-RSAIK--IVDFGSSCQLGQRIYQYIQ------SRFYRSPEV 294
NI+H DLKP NIL+ P IK I DFG +L + + + + + +PE+
Sbjct: 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM 197
Query: 295 LLGIPYD---LAIDMWSLGCIL 313
L + +D++S GC+
Sbjct: 198 LSEDCKENPTYTVDIFSAGCVF 219
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKAD-- 176
+ E + IGKG FG V K ++++ VAIK + L ++ E +++E +
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL-----ILGDSEGETEMIEKFQEFQRE 73
Query: 177 ---VNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
++N + +K + + N +V E + +LY L + + ++ + +
Sbjct: 74 VFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIA 132
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSA---IKIVDFGSSCQLGQRIYQYIQSRFY 289
+ ++ I+H DL+ NI L + +A K+ DFG+S Q + + + +
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQW 192
Query: 290 RSPEVLLG--IPYDLAIDMWSLGCILVEMHTGEPLF 323
+PE + Y D +S IL + TGE F
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 46/247 (18%)
Query: 122 EIDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIKN------KKPFLNQAQIEVKLLEIM 172
+I+ +IG G FG+V + + VAIK +K+ ++ FL++A IM
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEA-------SIM 62
Query: 173 NKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQL 231
+ D N ++ L+ + ++ E + D LR + + + L + +
Sbjct: 63 GQFDHPN---VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML-RGI 118
Query: 232 CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSS-------------CQLGQ 278
+ +L+ ++N +H L NIL+ + K+ DFG S LG
Sbjct: 119 AAGMKYLA--DMNYVHRALAARNILVNS--NLVCKVSDFGLSRFLEDDTSDPTYTSALGG 174
Query: 279 RIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGE-PLFSGSNEVDQMNKIV 336
+I + +PE + + A D+WS G ++ E M GE P + +N+ D +N I
Sbjct: 175 KI-----PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-DVINAIE 228
Query: 337 EVLGLPP 343
+ LPP
Sbjct: 229 QDYRLPP 235
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 27/202 (13%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
+G G G+V + VA+K +K + E L++ + + Y +V
Sbjct: 21 LGAGQAGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 78
Query: 187 KRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNI 245
+ + ++ E + + +L D L+ + +++N + Q+ + F+ E N
Sbjct: 79 ------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNY 130
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ------SRF---YRSPEVLL 296
IH DL+ NIL+ + + KI DFG + R+ + + ++F + +PE +
Sbjct: 131 IHRDLRAANILVSD--TLSCKIADFGLA-----RLIEDAEXTAREGAKFPIKWTAPEAIN 183
Query: 297 GIPYDLAIDMWSLGCILVEMHT 318
+ + D+WS G +L E+ T
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT 205
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 92/217 (42%), Gaps = 44/217 (20%)
Query: 126 LIGKGSFGQVVKAFDLEE-QCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIV 184
++GKG FGQ +K E + V ++I+ + EVK++ + +V ++
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 185 RLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRK--------FSQQLCTALL 236
+ + + + ++ RG+ ++ + F++ + + +
Sbjct: 77 YKDKRLNF--------------ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMA 122
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-----------------GQR 279
+L + +NIIH DL N L+ K + + DFG + + ++
Sbjct: 123 YLHS--MNIIHRDLNSHNCLVRENKN--VVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178
Query: 280 IYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEM 316
Y + + ++ +PE++ G YD +D++S G +L E+
Sbjct: 179 RYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 46/220 (20%)
Query: 126 LIGKGSFGQVVKAFDLEE--QCHVAIKIIK------NKKPFLNQAQIEVKLLEIMNKADV 177
+IG+G+FGQV+KA ++ + AIK +K + + F + ++ KL N
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN---- 84
Query: 178 NNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR--------------NTNFRGVSLN 222
I+ L R +L L E + NL D LR N+ +S
Sbjct: 85 -----IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 223 LTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ 282
F+ + + +LS + IH +L NIL+ + KI DFG S GQ +
Sbjct: 140 QLLHFAADVARGMDYLSQKQF--IHRNLAARNILV--GENYVAKIADFGLS--RGQEV-- 191
Query: 283 YIQSRFYRSPEVLLGIP------YDLAIDMWSLGCILVEM 316
Y++ R P + I Y D+WS G +L E+
Sbjct: 192 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 231
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 33/214 (15%)
Query: 127 IGKGSFGQVVKAFDL-----EEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVN--- 178
+G+GSFG V + E + VAIK + N+A + +E +N+A V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRERIEFLNEASVMKEF 70
Query: 179 NTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR--------NTNFRGVSLNLTRKFSQ 229
N +++VRL ++ EL++ +L LR N SL+ + +
Sbjct: 71 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 130
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYI 284
++ + +L+ + +H DL N ++ + +KI DFG + + + + + +
Sbjct: 131 EIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFGMTRDIXETDXXRKGGKGL 186
Query: 285 QSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ SPE L + D+WS G +L E+ T
Sbjct: 187 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 195 HLCLVFELLSY-NLYDLL-RNTNFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKP 252
H L+ + Y +LY++L TNF V + KF+ + + FL T E I L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFV-VDQSQAVKFALDMARGMAFLHTLEPLIPRHALNS 141
Query: 253 ENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDL---AIDMWSL 309
++++ + I + D S Q R+Y + + +PE L P D + DMWS
Sbjct: 142 RSVMIDEDMTARISMADVKFSFQSPGRMY----APAWVAPEALQKKPEDTNRRSADMWSF 197
Query: 310 GCILVEMHTGEPLFS 324
+L E+ T E F+
Sbjct: 198 AVLLWELVTREVPFA 212
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 33/214 (15%)
Query: 127 IGKGSFGQVVK--AFDL---EEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
+G+GSFG V + A D+ E + VA+K + N++ + +E +N+A V +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 182 ---YIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR--------NTNFRGVSLNLTRKFSQ 229
++VRL +V EL+++ +L LR N +L + +
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF- 288
++ + +L+ + +H DL N ++ + +KI DFG + + + Y +
Sbjct: 138 EIADGMAYLNAKKF--VHRDLAARNCMVAH--DFTVKIGDFGMTRDIYETDYYRKGGKGL 193
Query: 289 ----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ +PE L + + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG G FG V K + C AIK ++KKP + L E+ A + ++VR
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 187 KRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQ---QLCTALLFLSTPEL 243
+ +H+ + E + + N+R +S + Q+ L ++ + +
Sbjct: 77 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS--M 134
Query: 244 NIIHCDLKPENILL 257
+++H D+KP NI +
Sbjct: 135 SLVHMDIKPSNIFI 148
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---Y 283
+S Q+ + FLS+ + IH DL NILL + + +KI DFG L + IY+ Y
Sbjct: 204 YSFQVARGMEFLSSRK--CIHRDLAARNILLS--ENNVVKICDFG----LARDIYKNPDY 255
Query: 284 IQ---SRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
++ +R + +PE + Y D+WS G +L E+ + G P
Sbjct: 256 VRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSP 301
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG G FG V K + C AIK ++KKP + L E+ A + ++VR
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 187 KRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQ---QLCTALLFLSTPEL 243
+ +H+ + E + + N+R +S + Q+ L ++ + +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS--M 132
Query: 244 NIIHCDLKPENILL 257
+++H D+KP NI +
Sbjct: 133 SLVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG G FG V K + C AIK ++KKP + L E+ A + ++VR
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 187 KRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQ---QLCTALLFLSTPEL 243
+ +H+ + E + + N+R +S + Q+ L ++ + +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS--M 132
Query: 244 NIIHCDLKPENILL 257
+++H D+KP NI +
Sbjct: 133 SLVHMDIKPSNIFI 146
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFY 289
++ AL +L + + +++ DLKPENI+L + +K++D G+ ++ Y Y F
Sbjct: 190 EILPALSYLHS--IGLVYNDLKPENIMLTEEQ---LKLIDLGAVSRINSFGYLYGTPGF- 243
Query: 290 RSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSG 325
++PE++ P +A D++++G L + P +G
Sbjct: 244 QAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNG 278
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 101/260 (38%), Gaps = 39/260 (15%)
Query: 120 RYEIDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLE 170
R I+ +IG G G+V + VAIK +K ++ FL++A I
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI------ 103
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
M + D N I+RL+ +V E + D T+ ++ +
Sbjct: 104 -MGQFDHPN---IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ---RIYQYIQSR 287
+ + +LS +L +H DL N+L+ K+ DFG S L Y +
Sbjct: 160 VGAGMRYLS--DLGYVHRDLAARNVLV--DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGK 215
Query: 288 F---YRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGEPLFSGSNEVDQMNKIVEVLGLPP 343
+ +PE + + A D+WS G ++ E + GE + D ++ + E LP
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA 275
Query: 344 ---------KHLLDGAHKTR 354
+ +LD HK R
Sbjct: 276 PMGCPHALHQLMLDCWHKDR 295
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 29/233 (12%)
Query: 126 LIGKGSFGQVVKAF----DLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
+IG G FG+V K +++ VAIK +K E + ++ + +A + +
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLK-------AGYTEKQRVDFLGEAGIMGQF 103
Query: 182 Y---IVRLKRHFMWRNHLCLVFELLSYNLYD-LLRNTNFRGVSLNLTRKFSQQLCTALLF 237
I+RL+ + ++ E + D LR + L L + + + +
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML-RGIAAGMKY 162
Query: 238 LSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQYIQSRF---YRS 291
L+ +N +H DL NIL+ + K+ DFG S L + Y + + +
Sbjct: 163 LAN--MNYVHRDLAARNILVNS--NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 218
Query: 292 PEVLLGIPYDLAIDMWSLGCILVEMHT-GE-PLFSGSNEVDQMNKIVEVLGLP 342
PE + + A D+WS G ++ E+ T GE P + SN + M I + LP
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAINDGFRLP 270
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 111 IQHGEKFLDRYEI---DSLIGKGSFGQVVKAF--DLEEQCHVAIKIIKNKKPFLNQAQIE 165
I+ E +LDR + D +G G+FG V K + + VA+KI+KN+ N ++
Sbjct: 16 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 72
Query: 166 VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTR 225
+LL N + YIVR+ LV E+ + N R V
Sbjct: 73 DELLAEANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQN-RHVKDKNII 130
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYI 284
+ Q+ + +L E N +H DL N+LL + KI DFG S L Y
Sbjct: 131 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKA 186
Query: 285 QSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT-GEPLFSG--SNEVDQMNKIV 336
Q+ + +PE + + D+WS G ++ E + G+ + G +EV M +
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 246
Query: 337 EVLGLP---PKHLLD 348
E +G P P+ + D
Sbjct: 247 ERMGCPAGCPREMYD 261
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 111 IQHGEKFLDRYEI---DSLIGKGSFGQVVKAF--DLEEQCHVAIKIIKNKKPFLNQAQIE 165
I+ E +LDR + D +G G+FG V K + + VA+KI+KN+ N ++
Sbjct: 16 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 72
Query: 166 VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTR 225
+LL N + YIVR+ LV E+ + N R V
Sbjct: 73 DELLAEANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQN-RHVKDKNII 130
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYI 284
+ Q+ + +L E N +H DL N+LL + KI DFG S L Y
Sbjct: 131 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKA 186
Query: 285 QSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT-GEPLFSG--SNEVDQMNKIV 336
Q+ + +PE + + D+WS G ++ E + G+ + G +EV M +
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 246
Query: 337 EVLGLP---PKHLLD 348
E +G P P+ + D
Sbjct: 247 ERMGCPAGCPREMYD 261
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 111 IQHGEKFLDRYEI---DSLIGKGSFGQVVKAF--DLEEQCHVAIKIIKNKKPFLNQAQIE 165
I+ E +LDR + D +G G+FG V K + + VA+KI+KN+ N ++
Sbjct: 14 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 70
Query: 166 VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTR 225
+LL N + YIVR+ LV E+ + N R V
Sbjct: 71 DELLAEANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQN-RHVKDKNII 128
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYI 284
+ Q+ + +L E N +H DL N+LL + KI DFG S L Y
Sbjct: 129 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKA 184
Query: 285 QSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT-GEPLFSG--SNEVDQMNKIV 336
Q+ + +PE + + D+WS G ++ E + G+ + G +EV M +
Sbjct: 185 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 244
Query: 337 EVLGLP---PKHLLD 348
E +G P P+ + D
Sbjct: 245 ERMGCPAGCPREMYD 259
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 95/229 (41%), Gaps = 39/229 (17%)
Query: 122 EIDSLIGKGSFGQVVKA--FDLEE---QCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKAD 176
E ++G G+FG+V+ A + + + VA+K++K K + ++ E + E+
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSEREALMSELKMMTQ 104
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRN---------------------T 214
+ + IV L + L+FE Y +L + LR+
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 215 NFRGVSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSC 274
+ ++ F+ Q+ + FL + +H DL N+L+ + K +KI DFG +
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFK--SCVHRDLAARNVLVTHGK--VVKICDFGLAR 220
Query: 275 QLGQRIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ ++ + +PE L Y + D+WS G +L E+ +
Sbjct: 221 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 33/214 (15%)
Query: 127 IGKGSFGQVVK--AFDL---EEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
+G+GSFG V + A D+ E + VA+K + N++ + +E +N+A V +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 182 ---YIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR--------NTNFRGVSLNLTRKFSQ 229
++VRL +V EL+++ +L LR N +L + +
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYI 284
++ + +L+ + +H DL N ++ + +KI DFG + + + + + +
Sbjct: 138 EIADGMAYLNAKKF--VHRDLAARNCMVAH--DFTVKIGDFGMTRDIXETDXXRKGGKGL 193
Query: 285 QSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ +PE L + + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 33/214 (15%)
Query: 127 IGKGSFGQVVK--AFDL---EEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
+G+GSFG V + A D+ E + VA+K + N++ + +E +N+A V +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 182 ---YIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR--------NTNFRGVSLNLTRKFSQ 229
++VRL +V EL+++ +L LR N +L + +
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYI 284
++ + +L+ + +H DL N ++ + +KI DFG + + + + + +
Sbjct: 138 EIADGMAYLNAKKF--VHRDLAARNCMVAH--DFTVKIGDFGMTRDIXETDXXRKGGKGL 193
Query: 285 QSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ +PE L + + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 17/216 (7%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKAD-- 176
+ E + IGKG FG V K ++++ VAIK + L ++ E +++E +
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL-----ILGDSEGETEMIEKFQEFQRE 73
Query: 177 ---VNNTYYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRNTNFRGVSLNLTRKFSQQLC 232
++N + +K + + N +V E + +LY L + + ++ + +
Sbjct: 74 VFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIA 132
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSA---IKIVDFGSSCQLGQRIYQYIQSRFY 289
+ ++ I+H DL+ NI L + +A K+ DFG S Q + + + +
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQW 192
Query: 290 RSPEVLLG--IPYDLAIDMWSLGCILVEMHTGEPLF 323
+PE + Y D +S IL + TGE F
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 33/214 (15%)
Query: 127 IGKGSFGQVVK--AFDL---EEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
+G+GSFG V + A D+ E + VA+K + N++ + +E +N+A V +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 74
Query: 182 ---YIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR--------NTNFRGVSLNLTRKFSQ 229
++VRL +V EL+++ +L LR N +L + +
Sbjct: 75 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQYI 284
++ + +L+ + +H DL N ++ + +KI DFG + + + + + +
Sbjct: 135 EIADGMAYLNAKKF--VHRDLAARNCMVAH--DFTVKIGDFGMTRDIXETDXXRKGGKGL 190
Query: 285 QSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ +PE L + + DMWS G +L E+ +
Sbjct: 191 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 119 DRYEIDSLIGKGSFGQVV--KAFDLEEQ-----CHVAIKIIKNKKPFLNQAQI--EVKLL 169
DR + +G+G+FGQVV +A L++ VA+K++K+ + + + E++++
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRK 226
+++ K I+ L L ++ E S NL + L+ G+ S N +
Sbjct: 80 KMIGKHK-----NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 134
Query: 227 FSQQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 276
+QL + L ++ IH DL N+L+ + + +KI DFG + +
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNVMKIADFGLARDI 192
Query: 277 GQRIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 193 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 244
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 90/213 (42%), Gaps = 18/213 (8%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
+ + ++G+G+ V + + AIK+ N FL ++++ E++ K + N
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNI 69
Query: 181 YYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRN-TNFRGVSLNLTRKFSQQLCTALLFL 238
+ ++ R H L+ E +LY +L +N G+ + + + + L
Sbjct: 70 VKLFAIEEETTTR-HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 239 STPELNIIHCDLKPENIL--LCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPEV 294
E I+H ++KP NI+ + +S K+ DFG++ +L ++ + Y P++
Sbjct: 129 R--ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDM 186
Query: 295 LLGI--------PYDLAIDMWSLGCILVEMHTG 319
Y +D+WS+G TG
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 33/214 (15%)
Query: 127 IGKGSFGQVVK--AFDL---EEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
+G+GSFG V + A D+ E + VA+K + N++ + +E +N+A V +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 78
Query: 182 ---YIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR--------NTNFRGVSLNLTRKFSQ 229
++VRL +V EL+++ +L LR N +L + +
Sbjct: 79 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF- 288
++ + +L+ + +H +L N ++ + +KI DFG + + + Y +
Sbjct: 139 EIADGMAYLNAKKF--VHRNLAARNCMVAH--DFTVKIGDFGMTRDIYETDYYRKGGKGL 194
Query: 289 ----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ +PE L + + DMWS G +L E+ +
Sbjct: 195 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 119 DRYEIDSLIGKGSFGQVV--KAFDLEEQ-----CHVAIKIIKNKKPFLNQAQI--EVKLL 169
DR + +G+G+FGQVV +A L++ VA+K++K+ + + + E++++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRK 226
+++ K I+ L L ++ E S NL + L+ G+ S N +
Sbjct: 88 KMIGKHK-----NIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHN 142
Query: 227 FSQQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 276
+QL + L ++ IH DL N+L+ + + +KI DFG + +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNVMKIADFGLARDI 200
Query: 277 GQRIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 90/213 (42%), Gaps = 18/213 (8%)
Query: 121 YEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNT 180
+ + ++G+G+ V + + AIK+ N FL ++++ E++ K + N
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNI 69
Query: 181 YYIVRLKRHFMWRNHLCLVFELL-SYNLYDLLRN-TNFRGVSLNLTRKFSQQLCTALLFL 238
+ ++ R H L+ E +LY +L +N G+ + + + + L
Sbjct: 70 VKLFAIEEETTTR-HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 239 STPELNIIHCDLKPENIL--LCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPEV 294
E I+H ++KP NI+ + +S K+ DFG++ +L ++ + Y P++
Sbjct: 129 R--ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186
Query: 295 LLGI--------PYDLAIDMWSLGCILVEMHTG 319
Y +D+WS+G TG
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 33/214 (15%)
Query: 127 IGKGSFGQVVK--AFDL---EEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
+G+GSFG V + A D+ E + VA+K + N++ + +E +N+A V +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 182 ---YIVRLKRHFMWRNHLCLVFELLSY-NLYDLLR--------NTNFRGVSLNLTRKFSQ 229
++VRL +V EL+++ +L LR N +L + +
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF- 288
++ + +L+ + +H +L N ++ + +KI DFG + + + Y +
Sbjct: 138 EIADGMAYLNAKKF--VHRNLAARNCMVAH--DFTVKIGDFGMTRDIYETDYYRKGGKGL 193
Query: 289 ----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT 318
+ +PE L + + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 119 DRYEIDSLIGKGSFGQVV--KAFDLEEQ-----CHVAIKIIKNKKPFLNQAQI--EVKLL 169
DR + +G+G+FGQVV +A L++ VA+K++K+ + + + E++++
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRK 226
+++ K I+ L L ++ E S NL + L+ G+ S N +
Sbjct: 129 KMIGKHK-----NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183
Query: 227 FSQQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 276
+QL + L ++ IH DL N+L+ + + +KI DFG + +
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNVMKIADFGLARDI 241
Query: 277 GQRIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 242 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 119 DRYEIDSLIGKGSFGQVV--KAFDLEEQ-----CHVAIKIIKNKKPFLNQAQI--EVKLL 169
DR + +G+G+FGQVV +A L++ VA+K++K+ + + + E++++
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRK 226
+++ K I+ L L ++ E S NL + L+ G+ S N +
Sbjct: 77 KMIGKHK-----NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 131
Query: 227 FSQQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 276
+QL + L ++ IH DL N+L+ + + +KI DFG + +
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNVMKIADFGLARDI 189
Query: 277 GQRIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 190 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 241
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 119 DRYEIDSLIGKGSFGQVV--KAFDLEEQ-----CHVAIKIIKNKKPFLNQAQI--EVKLL 169
DR + +G+G+FGQVV +A L++ VA+K++K+ + + + E++++
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRK 226
+++ K I+ L L ++ E S NL + L+ G+ S N +
Sbjct: 81 KMIGKHK-----NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 135
Query: 227 FSQQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 276
+QL + L ++ IH DL N+L+ + + +KI DFG + +
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNVMKIADFGLARDI 193
Query: 277 GQRIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 194 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 245
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 119 DRYEIDSLIGKGSFGQVV--KAFDLEEQ-----CHVAIKIIKNKKPFLNQAQI--EVKLL 169
DR + +G+G+FGQVV +A L++ VA+K++K+ + + + E++++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRK 226
+++ K I+ L L ++ E S NL + L+ G+ S N +
Sbjct: 88 KMIGKHK-----NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 142
Query: 227 FSQQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 276
+QL + L ++ IH DL N+L+ + + +KI DFG + +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNVMKIADFGLARDI 200
Query: 277 GQRIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 98/237 (41%), Gaps = 32/237 (13%)
Query: 123 IDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLEIMN 173
I+ +IG G FG+V + + VAIK +K ++ FL +A I M
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASI-------MG 78
Query: 174 KADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCT 233
+ D N I+ L+ + +V E + D N ++ + +
Sbjct: 79 QFDHPN---IIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISA 135
Query: 234 ALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF----- 288
+ +LS ++ +H DL NIL+ + K+ DFG S L +R
Sbjct: 136 GMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 191
Query: 289 -YRSPEVLLGIPYDLAIDMWSLGCILVEMHT-GE-PLFSGSNEVDQMNKIVEVLGLP 342
+ +PE + + A D+WS G ++ E+ + GE P + +N+ D + + E LP
Sbjct: 192 RWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQ-DVIKAVEEGYRLP 247
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 111 IQHGEKFLDRYEI---DSLIGKGSFGQVVKAF--DLEEQCHVAIKIIKNKKPFLNQAQIE 165
I+ E +LDR + D +G G+FG V K + + VA+KI+KN+ N ++
Sbjct: 6 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 62
Query: 166 VKLLEIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTR 225
+LL N + YIVR+ LV E+ + N R V
Sbjct: 63 DELLAEANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQN-RHVKDKNII 120
Query: 226 KFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYI 284
+ Q+ + +L E N +H DL N+LL + KI DFG S L Y
Sbjct: 121 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKA 176
Query: 285 QSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT-GEPLFSG--SNEVDQMNKIV 336
Q+ + +PE + + D+WS G ++ E + G+ + G +EV M +
Sbjct: 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 236
Query: 337 EVLGLP---PKHLLD 348
E +G P P+ + D
Sbjct: 237 ERMGCPAGCPREMYD 251
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 106/251 (42%), Gaps = 26/251 (10%)
Query: 115 EKFLDRYEI---DSLIGKGSFGQVVKAF--DLEEQCHVAIKIIKNKKPFLNQAQIEVKLL 169
E +LDR + D +G G+FG V K + + VA+KI+KN+ N ++ +LL
Sbjct: 4 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELL 60
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQ 229
N + YIVR+ LV E+ + N R V +
Sbjct: 61 AEANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVH 118
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRF 288
Q+ + +L E N +H DL N+LL + KI DFG S L Y Q+
Sbjct: 119 QVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHG 174
Query: 289 -----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT-GEPLFSG--SNEVDQMNKIVEVLG 340
+ +PE + + D+WS G ++ E + G+ + G +EV M + E +G
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 234
Query: 341 LP---PKHLLD 348
P P+ + D
Sbjct: 235 CPAGCPREMYD 245
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 17/89 (19%)
Query: 247 HCDLKPENILLCNPKRSAIKIVDFGSSCQL-----GQRIYQYIQ-------SRFYRSPEV 294
H DLKP NILL + + + +D GS Q G R +Q + YR+PE+
Sbjct: 157 HRDLKPTNILLGDEGQPVL--MDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPEL 214
Query: 295 LLGIPY---DLAIDMWSLGCILVEMHTGE 320
+ D D+WSLGC+L M GE
Sbjct: 215 FSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 40/234 (17%)
Query: 119 DRYEIDSLIGKGSFGQVV--KAFDLEEQ-----CHVAIKIIKNKKPFLNQAQI--EVKLL 169
DR + +G+G+FGQVV +A L++ VA+K++K+ + + + E++++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV------SLN 222
+++ K I+ L L ++ E S NL + L+ G+ S N
Sbjct: 88 KMIGKHK-----NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 142
Query: 223 LTRKFSQ--------QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSC 274
+ S Q+ + +L++ + IH DL N+L+ + + +KI DFG +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLAR 198
Query: 275 QLGQRIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
+ Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 101/261 (38%), Gaps = 41/261 (15%)
Query: 120 RYEIDSLIGKGSFGQVVKA---FDLEEQCHVAIKIIK------NKKPFLNQAQIEVKLLE 170
R I+ +IG G G+V + VAIK +K ++ FL++A I
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI------ 103
Query: 171 IMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQ 230
M + D N I+RL+ +V E + D T+ ++ +
Sbjct: 104 -MGQFDHPN---IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159
Query: 231 LCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-------GQRIYQY 283
+ + +LS +L +H DL N+L+ K+ DFG S L
Sbjct: 160 VGAGMRYLS--DLGYVHRDLAARNVLV--DSNLVCKVSDFGLSRVLEDDPDAAXTTTGGK 215
Query: 284 IQSRFYRSPEVLLGIPYDLAIDMWSLGCILVE-MHTGEPLFSGSNEVDQMNKIVEVLGLP 342
I R + +PE + + A D+WS G ++ E + GE + D ++ + E LP
Sbjct: 216 IPIR-WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP 274
Query: 343 P---------KHLLDGAHKTR 354
+ +LD HK R
Sbjct: 275 APMGCPHALHQLMLDCWHKDR 295
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 40/234 (17%)
Query: 119 DRYEIDSLIGKGSFGQVV--KAFDLEEQ-----CHVAIKIIKNKKPFLNQAQI--EVKLL 169
DR + +G+G+FGQVV +A L++ VA+K++K+ + + + E++++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV------SLN 222
+++ K I+ L L ++ E S NL + L+ G+ S N
Sbjct: 73 KMIGKHK-----NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 127
Query: 223 LTRKFSQ--------QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSC 274
+ S Q+ + +L++ + IH DL N+L+ + + +KI DFG +
Sbjct: 128 PEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLAR 183
Query: 275 QLGQRIY--QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
+ Y + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 184 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 237
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 44/236 (18%)
Query: 119 DRYEIDSLIGKGSFGQVV--KAFDLEEQ-----CHVAIKIIKNKKPFLNQAQI--EVKLL 169
DR + +G+G+FGQVV +A L++ VA+K++K+ + + + E++++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGV--SLNLTRK 226
+++ K I+ L L ++ E S NL + L+ G+ S N +
Sbjct: 88 KMIGKHK-----NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHN 142
Query: 227 FSQQLCTALLFLSTPEL----------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 276
+QL + L ++ IH DL N+L+ + + +KI DFG L
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNVMKIADFG----L 196
Query: 277 GQRIY------QYIQSRF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEP 321
+ I+ + R + +PE L Y D+WS G +L E+ T G P
Sbjct: 197 ARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 26/251 (10%)
Query: 115 EKFLDRYEI---DSLIGKGSFGQVVKAF--DLEEQCHVAIKIIKNKKPFLNQAQIEVKLL 169
E +LDR + D +G G+FG V K + + VA+KI+KN+ N ++ +LL
Sbjct: 4 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELL 60
Query: 170 EIMNKADVNNTYYIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQ 229
N + YIVR+ LV E+ + N R V +
Sbjct: 61 AEANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVH 118
Query: 230 QLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQY---IQS 286
Q+ + +L E N +H DL N+LL + KI DFG S L Y
Sbjct: 119 QVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENXYKAQTHG 174
Query: 287 RF---YRSPEVLLGIPYDLAIDMWSLGCILVEMHT-GEPLFSG--SNEVDQMNKIVEVLG 340
++ + +PE + + D+WS G ++ E + G+ + G +EV M + E +G
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 234
Query: 341 LP---PKHLLD 348
P P+ + D
Sbjct: 235 CPAGCPREMYD 245
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Query: 219 VSLNLTRKFSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 278
+ L+ + Q+ + +++L++ + +H DL N L+ +KI DFG S +
Sbjct: 130 LGLSQMLHIASQIASGMVYLASQ--HFVHRDLATRNCLV--GANLLVKIGDFGMSRDVYS 185
Query: 279 RIYQYIQSRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT--GEPLFSGSN---- 327
Y + + PE ++ + D+WS G IL E+ T +P F SN
Sbjct: 186 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI 245
Query: 328 EVDQMNKIVEVLGLPPKHLLD 348
E +++E + PK + D
Sbjct: 246 ECITQGRVLERPRVCPKEVYD 266
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 15/195 (7%)
Query: 127 IGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTYYIVRL 186
IG+G+FG+V + VA+K + P ++ K L+ + IVRL
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLP----PDLKAKFLQEARILKQYSHPNIVRL 177
Query: 187 KRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFLSTPELN-I 245
+ + +V EL+ D L G L + + Q + A + E
Sbjct: 178 IGVCTQKQPIYIVMELVQGG--DFLTFLRTEGARLRV-KTLLQMVGDAAAGMEYLESKCC 234
Query: 246 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF-----YRSPEVLLGIPY 300
IH DL N L+ +++ +KI DFG S + +Y + +PE L Y
Sbjct: 235 IHRDLAARNCLVT--EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRY 292
Query: 301 DLAIDMWSLGCILVE 315
D+WS G +L E
Sbjct: 293 SSESDVWSFGILLWE 307
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 107/254 (42%), Gaps = 36/254 (14%)
Query: 117 FLDRYEI---DSLIGKGSFGQVVKAF--DLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEI 171
+LDR + D +G G+FG V K + + VA+KI+KN+ N ++ +LL
Sbjct: 2 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELLAE 58
Query: 172 MNKADVNNTYYIVRL-----KRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRK 226
N + YIVR+ +M LV E+ + N R V +
Sbjct: 59 ANVMQQLDNPYIVRMIGICEAESWM------LVMEMAELGPLNKYLQQN-RHVKDKNIIE 111
Query: 227 FSQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQ 285
Q+ + +L E N +H DL N+LL + KI DFG S L Y Q
Sbjct: 112 LVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQ 167
Query: 286 SRF-----YRSPEVLLGIPYDLAIDMWSLGCILVEMHT-GEPLFSG--SNEVDQMNKIVE 337
+ + +PE + + D+WS G ++ E + G+ + G +EV M + E
Sbjct: 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 227
Query: 338 VLGLP---PKHLLD 348
+G P P+ + D
Sbjct: 228 RMGCPAGCPREMYD 241
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 94/228 (41%), Gaps = 40/228 (17%)
Query: 118 LDRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQI-EVKLLEIMNKAD 176
LD ++ LIG+G +G V K E V + N++ F+N+ I V L+E N A
Sbjct: 12 LDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIA- 70
Query: 177 VNNTYYIVRLKRHFM-WRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTAL 235
+IV +R R LV E Y L + + + + + + L
Sbjct: 71 ----RFIVGDERVTADGRMEYLLVMEY--YPNGSLXKYLSLHTSDWVSSCRLAHSVTRGL 124
Query: 236 LFLSTPEL--------NIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQ---- 282
+L T EL I H DL N+L+ N I DFG S +L G R+ +
Sbjct: 125 AYLHT-ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS--DFGLSMRLTGNRLVRPGEE 181
Query: 283 ------YIQSRFYRSPEVLLGIPYDL--------AIDMWSLGCILVEM 316
+ + Y +PEVL G +L +DM++LG I E+
Sbjct: 182 DNAAISEVGTIRYMAPEVLEG-AVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 102/244 (41%), Gaps = 33/244 (13%)
Query: 124 DSLIGKGSFGQVVKAF--DLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
D +G G+FG V K + + VA+KI+KN+ N ++ +LL N +
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELLAEANVMQQLDNP 66
Query: 182 YIVRL-----KRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALL 236
YIVR+ +M LV E+ + N R V + Q+ +
Sbjct: 67 YIVRMIGICEAESWM------LVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMK 119
Query: 237 FLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQYIQSRF-----YR 290
+L E N +H DL N+LL + KI DFG S L Y Q+ +
Sbjct: 120 YLE--ESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHGKWPVKWY 175
Query: 291 SPEVLLGIPYDLAIDMWSLGCILVEMHT-GEPLFSG--SNEVDQMNKIVEVLGLP---PK 344
+PE + + D+WS G ++ E + G+ + G +EV M + E +G P P+
Sbjct: 176 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 235
Query: 345 HLLD 348
+ D
Sbjct: 236 EMYD 239
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 113/272 (41%), Gaps = 28/272 (10%)
Query: 119 DRYEIDSLIGKGSFGQVVKAFDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKAD-- 176
+ E + IGKG FG V K ++++ VAIK + L ++ E +++E +
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL-----ILGDSEGETEMIEKFQEFQRE 73
Query: 177 ---VNNTYYIVRLKRHFMWRNHLCLVFELLSY-NLYDLLRNTNFRGVSLNLTRKFSQQLC 232
++N + +K + + N +V E + +LY L + + ++ + +
Sbjct: 74 VFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIA 132
Query: 233 TALLFLSTPELNIIHCDLKPENILLCNPKRSA---IKIVDFGSSCQLGQRIYQYIQSRFY 289
+ ++ I+H DL+ NI L + +A K+ DF S Q + + + +
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQW 192
Query: 290 RSPEVLLG--IPYDLAIDMWSLGCILVEMHTGEPLFS--GSNEVDQMNKIVEVLGLPPKH 345
+PE + Y D +S IL + TGE F ++ +N I E GL P
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE-GLRPTI 251
Query: 346 LLDGAHKTRKYFD--------KMPDGSYILKK 369
D + R + K P SYI+K+
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 19/153 (12%)
Query: 126 LIGKGSFGQVVKAFDLEE----QCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
++G G+FG V K + E + VAIKI LN+ +E M++A + +
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKI-------LNETTGPKANVEFMDEALIMASM 97
Query: 182 ---YIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFL 238
++VRL + + LV +L+ + + + + L + Q+ +++L
Sbjct: 98 DHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 156
Query: 239 STPELNIIHCDLKPENILLCNPKRSAIKIVDFG 271
E ++H DL N+L+ +P +KI DFG
Sbjct: 157 E--ERRLVHRDLAARNVLVKSPNH--VKITDFG 185
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 19/153 (12%)
Query: 126 LIGKGSFGQVVKAFDLEE----QCHVAIKIIKNKKPFLNQAQIEVKLLEIMNKADVNNTY 181
++G G+FG V K + E + VAIKI LN+ +E M++A + +
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKI-------LNETTGPKANVEFMDEALIMASM 74
Query: 182 ---YIVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFSQQLCTALLFL 238
++VRL + + LV +L+ + + + + L + Q+ +++L
Sbjct: 75 DHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 133
Query: 239 STPELNIIHCDLKPENILLCNPKRSAIKIVDFG 271
E ++H DL N+L+ +P +KI DFG
Sbjct: 134 E--ERRLVHRDLAARNVLVKSPNH--VKITDFG 162
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 29/238 (12%)
Query: 120 RYEIDSLIGKGSFGQVVKA-FDLEEQCHVAIKIIKNKKPFLNQAQIEVKLLE--IMNKAD 176
++ + ++GKG FG V +A E+ V + + K + + IE L E M + D
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 177 VNNTYYIVRLKRHFMWRNHLCLVFELLSY----NLYDLLRNTNFRGVSLNL----TRKFS 228
+ +V + + L + +L + +L+ L + NL +F
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 229 QQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---YIQ 285
+ + +LS+ N IH DL N +L + + + DFG L ++IY Y Q
Sbjct: 144 VDIACGMEYLSSR--NFIHRDLAARNCML--AEDMTVCVADFG----LSRKIYSGDYYRQ 195
Query: 286 SRFYRSPEVLLGIP------YDLAIDMWSLGCILVEMHT-GEPLFSGSNEVDQMNKIV 336
+ P L + Y + D+W+ G + E+ T G+ ++G + N ++
Sbjct: 196 GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI 253
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,699,777
Number of Sequences: 62578
Number of extensions: 560936
Number of successful extensions: 4120
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 352
Number of HSP's that attempted gapping in prelim test: 1425
Number of HSP's gapped (non-prelim): 1489
length of query: 493
length of database: 14,973,337
effective HSP length: 103
effective length of query: 390
effective length of database: 8,527,803
effective search space: 3325843170
effective search space used: 3325843170
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)