BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16082
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q90805|CNG1_CHICK Cyclic nucleotide-gated channel cone photoreceptor subunit alpha
OS=Gallus gallus PE=2 SV=1
Length = 735
Score = 213 bits (542), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 145/218 (66%), Gaps = 3/218 (1%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
V++P SN+Y+ WL II V YN LI R F ELQ + K W F DY +D V D+
Sbjct: 202 VIDPSSNMYYNWLTIIAAPVFYNWCMLICRACFDELQIDHIKLWLFLDYCSDIIYVFDMF 261
Query: 98 VQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-PMLRFPRFL 156
V+FRTG+LEQGL+V + KL HY ++ F LD++SLLP DL Y K+G+N P LRF R L
Sbjct: 262 VRFRTGFLEQGLLVKDEKKLRDHYTQTVQFKLDVLSLLPTDLAYLKLGLNYPELRFNRLL 321
Query: 157 KVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVYP- 214
++ R+++++ E+RT YPN++R+ NLV +LI HW C Y+ +S+ GF D WVYP
Sbjct: 322 RIARLFEFFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKVIGFGTDSWVYPN 381
Query: 215 YRVGEFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
+ E+ L+RKY+ S+YWSTLTLTTIG+ P P D E
Sbjct: 382 VSIPEYGRLSRKYIYSLYWSTLTLTTIGETPPPVKDEE 419
>sp|Q9JJZ8|CNGA3_MOUSE Cyclic nucleotide-gated cation channel alpha-3 OS=Mus musculus
GN=Cnga3 PE=1 SV=2
Length = 631
Score = 207 bits (527), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 114/246 (46%), Positives = 149/246 (60%), Gaps = 14/246 (5%)
Query: 10 GDSGQPDDGNCHAGRRPRCRRKKVHHSTVVNPDSNLYFYWLLIITCCVLYNLWTLIVRQS 69
G+ PD G GR+ VV+P SN+Y+ WL I V YN L+ R
Sbjct: 84 GEQKPPDGGE---GRK--------EEPIVVDPSSNIYYRWLTAIALPVFYNWCLLVCRAC 132
Query: 70 FPELQENGAKFWFFCDYTTDTFIVLDILVQFRTGYLEQGLMVYNSMKLAGHYVKSRAFML 129
F ELQ W DY+ D VLD+LV+ RTG+LEQGLMV ++ +L HY K+ F L
Sbjct: 133 FDELQSEHLTLWLVLDYSADVLYVLDMLVRARTGFLEQGLMVRDTKRLWKHYTKTLHFKL 192
Query: 130 DIISLLPLDLLYFKIGVN-PMLRFPRFLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILL 188
DI+SL+P DL Y K+GVN P LRF R LK R+++++ E+RT YPN++R+ NLV L
Sbjct: 193 DILSLIPTDLAYLKLGVNYPELRFNRLLKFSRLFEFFDRTETRTNYPNVFRIGNLVLYTL 252
Query: 189 IFAHWFGCFYYLLSQAEGFYGD-WVYPYRVG-EFSTLTRKYLGSIYWSTLTLTTIGDLPQ 246
I HW C Y+ +S+ GF D WVYP E++ L+RKY+ S+YWSTLTLTTIG+ P
Sbjct: 253 IIIHWNACIYFAISKFIGFGTDSWVYPNTSKPEYARLSRKYIYSLYWSTLTLTTIGETPP 312
Query: 247 PETDVE 252
P D E
Sbjct: 313 PVKDEE 318
>sp|Q90980|CNG3_CHICK Cyclic nucleotide-gated channel rod photoreceptor subunit alpha
OS=Gallus gallus PE=2 SV=1
Length = 645
Score = 206 bits (525), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 141/218 (64%), Gaps = 3/218 (1%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
+++P N+Y+ WL IT V+YN +I R F ELQ + WF DY +D + D+
Sbjct: 109 IIDPAGNMYYNWLFCITMPVMYNWTMIIARACFDELQNDYLAVWFIVDYVSDVIYIADMF 168
Query: 98 VQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-PMLRFPRFL 156
V+ RTGYLEQGL+V KL Y S F LD +S++P DLLYFK+G+N P LR R L
Sbjct: 169 VRTRTGYLEQGLLVKEEQKLKEKYKSSLQFKLDFLSIIPTDLLYFKLGLNYPELRINRLL 228
Query: 157 KVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVYPY 215
+V R+++++ E+RT YPN++R+ NLV ++I HW C YY +S+A GF D WVYP
Sbjct: 229 RVARMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPN 288
Query: 216 RV-GEFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
EF+ LTRKY+ S+YWSTLTLTTIG+ P P D E
Sbjct: 289 TSHPEFARLTRKYVYSLYWSTLTLTTIGETPPPVRDSE 326
>sp|Q29441|CNGA3_BOVIN Cyclic nucleotide-gated cation channel alpha-3 OS=Bos taurus
GN=CNGA3 PE=2 SV=1
Length = 706
Score = 205 bits (521), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 145/220 (65%), Gaps = 3/220 (1%)
Query: 36 STVVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLD 95
S V++P SN+Y++WL +I V YN L+ R F ELQ W DY+ D +D
Sbjct: 177 SVVMDPSSNMYYHWLTVIAVPVFYNWCLLVCRACFDELQSEHLMLWLVLDYSADILYGMD 236
Query: 96 ILVQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-PMLRFPR 154
+LV+ RTG+LEQGLMV ++ +L HY ++ F LD++SL+P DL YFK+G+N P LRF R
Sbjct: 237 MLVRARTGFLEQGLMVMDASRLWKHYTQTLHFKLDVLSLVPTDLAYFKLGMNYPELRFNR 296
Query: 155 FLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVY 213
LK+ R+++++ E+RT YPN++R+ NLV +LI HW C Y+ +S+ GF D WVY
Sbjct: 297 LLKLARLFEFFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVY 356
Query: 214 PYRVG-EFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
P E+ L+RKY+ S+YWSTLTLTTIG+ P P D E
Sbjct: 357 PNVSNPEYGRLSRKYIYSLYWSTLTLTTIGETPPPVKDEE 396
>sp|Q16281|CNGA3_HUMAN Cyclic nucleotide-gated cation channel alpha-3 OS=Homo sapiens
GN=CNGA3 PE=1 SV=2
Length = 694
Score = 203 bits (517), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 141/220 (64%), Gaps = 3/220 (1%)
Query: 36 STVVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLD 95
+ VV+P SNLY+ WL I V YN + LI R F ELQ W DY+ D VLD
Sbjct: 158 AIVVDPSSNLYYRWLTAIALPVFYNWYLLICRACFDELQSEYLMLWLVLDYSADVLYVLD 217
Query: 96 ILVQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-PMLRFPR 154
+LV+ RTG+LEQGLMV ++ +L HY + F LD++SL+P DL Y K+G N P +RF R
Sbjct: 218 VLVRARTGFLEQGLMVSDTNRLWQHYKTTTQFKLDVLSLVPTDLAYLKVGTNYPEVRFNR 277
Query: 155 FLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVY 213
LK R+++++ E+RT YPN++R+ NLV +LI HW C Y+ +S+ GF D WVY
Sbjct: 278 LLKFSRLFEFFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVY 337
Query: 214 P-YRVGEFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
P + E L+RKY+ S+YWSTLTLTTIG+ P P D E
Sbjct: 338 PNISIPEHGRLSRKYIYSLYWSTLTLTTIGETPPPVKDEE 377
>sp|P29973|CNGA1_HUMAN cGMP-gated cation channel alpha-1 OS=Homo sapiens GN=CNGA1 PE=1
SV=3
Length = 690
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 140/218 (64%), Gaps = 3/218 (1%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
V++P N Y+ WL IT V+YN +I R F ELQ + ++W DY +D ++D+
Sbjct: 157 VIDPSGNTYYNWLFCITLPVMYNWTMVIARACFDELQSDYLEYWLILDYVSDIVYLIDMF 216
Query: 98 VQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-PMLRFPRFL 156
V+ RTGYLEQGL+V +KL Y + F LD++SL+P DLLYFK+G N P +R R L
Sbjct: 217 VRTRTGYLEQGLLVKEELKLINKYKSNLQFKLDVLSLIPTDLLYFKLGWNYPEIRLNRLL 276
Query: 157 KVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVYP- 214
+ R+++++ E+RT YPN++R+ NLV ++I HW C +Y +S+A GF D WVYP
Sbjct: 277 RFSRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVFYSISKAIGFGNDTWVYPD 336
Query: 215 YRVGEFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
EF L RKY+ S+YWSTLTLTTIG+ P P D E
Sbjct: 337 INDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSE 374
>sp|Q62927|CNGA1_RAT cGMP-gated cation channel alpha-1 OS=Rattus norvegicus GN=Cnga1
PE=2 SV=1
Length = 683
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 141/218 (64%), Gaps = 3/218 (1%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
V++P N+Y+ WL IT V+YN +I R F ELQ + ++W DY +D + D+
Sbjct: 148 VIDPSGNMYYNWLFCITLPVMYNWTMIIARACFDELQSDYLEYWLIFDYVSDVVYLADMF 207
Query: 98 VQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-PMLRFPRFL 156
V+ RTGYLEQGL+V + +KL Y + F LD++S++P DLLYFK G N P +R R L
Sbjct: 208 VRTRTGYLEQGLLVKDELKLIEKYKANLQFKLDVLSVIPTDLLYFKFGWNYPEIRLNRLL 267
Query: 157 KVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVYP- 214
++ R+++++ E+RT YPN++R+ NLV ++I HW C YY +S+A GF D WVYP
Sbjct: 268 RISRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGNDTWVYPD 327
Query: 215 YRVGEFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
EF L RKY+ S+YWSTLTLTTIG+ P P D E
Sbjct: 328 VNDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVLDSE 365
>sp|P29974|CNGA1_MOUSE cGMP-gated cation channel alpha-1 OS=Mus musculus GN=Cnga1 PE=2
SV=2
Length = 684
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 139/218 (63%), Gaps = 3/218 (1%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
V++P N Y+ WL IT V+YN +I R F ELQ + ++W DY +D + D+
Sbjct: 149 VIDPSGNTYYNWLFCITLPVMYNWTMIIARACFDELQSDYLEYWLIFDYVSDVVYLADMF 208
Query: 98 VQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-PMLRFPRFL 156
V+ RTGYLEQGL+V + MKL Y + F LD++S++P DLLY K G N P +R R L
Sbjct: 209 VRTRTGYLEQGLLVKDRMKLIEKYKANLQFKLDVLSVIPTDLLYIKFGWNYPEIRLNRLL 268
Query: 157 KVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVYP- 214
++ R+++++ E+RT YPN++R+ NLV ++I HW C YY +S+A GF D WVYP
Sbjct: 269 RISRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGNDTWVYPD 328
Query: 215 YRVGEFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
EF L RKY+ S+YWSTLTLTTIG+ P P D E
Sbjct: 329 VNDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVLDSE 366
>sp|Q28279|CNGA1_CANFA cGMP-gated cation channel alpha-1 OS=Canis familiaris GN=CNGA1 PE=2
SV=1
Length = 691
Score = 196 bits (498), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 140/218 (64%), Gaps = 3/218 (1%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
V++P N+Y+ WL IT V+YN +I R F ELQ + ++W DY +D +LD+
Sbjct: 156 VIDPAGNMYYNWLFCITLPVMYNWTMVIARACFDELQSDYLEYWIIFDYLSDIVYLLDMF 215
Query: 98 VQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-PMLRFPRFL 156
V+ RTGYLEQGL+V KL Y + F LD +S++P DLLYFK+G N P +R R L
Sbjct: 216 VRTRTGYLEQGLLVREEAKLIEKYKSNLQFKLDFLSVIPTDLLYFKLGWNYPEIRLNRLL 275
Query: 157 KVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVYP- 214
++ R+++++ E+RT YPN++R+ NLV ++I HW C Y+ +S+A GF D WVYP
Sbjct: 276 RISRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYFSISKAIGFGNDTWVYPD 335
Query: 215 YRVGEFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
EF L RKY+ S+YWSTLTLTTIG+ P P D E
Sbjct: 336 VNDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSE 373
>sp|Q00194|CNGA1_BOVIN cGMP-gated cation channel alpha-1 OS=Bos taurus GN=CNGA1 PE=1 SV=1
Length = 690
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 138/218 (63%), Gaps = 3/218 (1%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
V++P N Y+ WL IT V+YN +I R F ELQ + ++W DY +D +LD+
Sbjct: 155 VIDPSGNTYYNWLFCITLPVMYNWTMIIARACFDELQSDYLEYWLAFDYLSDVVYLLDMF 214
Query: 98 VQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-PMLRFPRFL 156
V+ RTGYLEQGL+V KL Y + F LD++S++P DLLY K G N P +R R L
Sbjct: 215 VRTRTGYLEQGLLVKEERKLIDKYKSTFQFKLDVLSVIPTDLLYIKFGWNYPEIRLNRLL 274
Query: 157 KVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVYP- 214
++ R+++++ E+RT YPN++R+ NLV ++I HW C Y+ +S+A GF D WVYP
Sbjct: 275 RISRMFEFFQRTETRTNYPNIFRISNLVMYIIIIIHWNACVYFSISKAIGFGNDTWVYPD 334
Query: 215 YRVGEFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
+F L RKY+ S+YWSTLTLTTIG+ P P D E
Sbjct: 335 VNDPDFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSE 372
>sp|Q00195|CNGA2_RAT Cyclic nucleotide-gated olfactory channel OS=Rattus norvegicus
GN=Cnga2 PE=2 SV=1
Length = 664
Score = 186 bits (471), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 140/218 (64%), Gaps = 3/218 (1%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
V++P + Y+ WL +I VLYN L+ R F +LQ N W DY +DT + D++
Sbjct: 134 VLDPAGDWYYRWLFVIAMPVLYNWCLLVARACFSDLQRNYFVVWLVLDYFSDTVYIADLI 193
Query: 98 VQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGV-NPMLRFPRFL 156
++ RTG+LEQGL+V + KL +Y+ + F LD+ S++P DL+YF +G+ +P +RF R L
Sbjct: 194 IRLRTGFLEQGLLVKDPKKLRDNYIHTLQFKLDVASIIPTDLIYFAVGIHSPEVRFNRLL 253
Query: 157 KVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVYPY 215
R+++++ E+RT YPN++R+ NLV +L+ HW C YY++S++ GF D WVYP
Sbjct: 254 HFARMFEFFDRTETRTSYPNIFRISNLVLYILVIIHWNACIYYVISKSIGFGVDTWVYPN 313
Query: 216 RVG-EFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
E+ L R+Y+ +YWSTLTLTTIG+ P P D E
Sbjct: 314 ITDPEYGYLAREYIYCLYWSTLTLTTIGETPPPVKDEE 351
>sp|Q62398|CNGA2_MOUSE Cyclic nucleotide-gated olfactory channel OS=Mus musculus GN=Cnga2
PE=2 SV=2
Length = 664
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 141/225 (62%), Gaps = 3/225 (1%)
Query: 31 KKVHHSTVVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDT 90
KK V++P + Y+ WL +I VLYN L+ R F +LQ N W DY +DT
Sbjct: 127 KKKFELFVLDPAGDWYYRWLFVIAMPVLYNWCLLVARACFSDLQRNYFVVWLVLDYFSDT 186
Query: 91 FIVLDILVQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGV-NPM 149
+ D++++ RTG+LEQGL+V + KL +Y+ + F LD+ S++P DL+YF +G+ +P
Sbjct: 187 VYIADLIIRLRTGFLEQGLLVKDPKKLRDNYIHTLQFKLDVASIIPTDLIYFAVGIHSPE 246
Query: 150 LRFPRFLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYG 209
+RF R L R+++++ E+RT YPN++R+ NLV +L+ HW C YY +S++ GF
Sbjct: 247 VRFNRLLHFARMFEFFDRTETRTSYPNIFRISNLVLYILVIIHWNACIYYAISKSIGFGV 306
Query: 210 D-WVYPYRVG-EFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
D WVYP E+ L R+Y+ +YWSTLTLTTIG+ P P D E
Sbjct: 307 DTWVYPNITDPEYGYLAREYIYCLYWSTLTLTTIGETPPPVKDEE 351
>sp|Q28718|CNGA2_RABIT Cyclic nucleotide-gated olfactory channel OS=Oryctolagus cuniculus
GN=CNGA2 PE=2 SV=1
Length = 664
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 136/218 (62%), Gaps = 3/218 (1%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
V++P + Y+ WL +I VLYN L+ R F +LQ W DY +D + D+
Sbjct: 132 VLDPAGDWYYRWLFVIAMPVLYNWCLLVARACFSDLQRGYFLVWLVLDYFSDVVYIADLF 191
Query: 98 VQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGV-NPMLRFPRFL 156
++ RTG+LEQGL+V + KL +Y+ + F LD+ S++P DL+YF +G+ NP LRF R L
Sbjct: 192 IRLRTGFLEQGLLVKDPKKLRDNYIHTLQFKLDVASIIPTDLIYFAVGIHNPELRFNRLL 251
Query: 157 KVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVYPY 215
R+++++ E+RT YPN++R+ NLV +L+ HW C YY +S++ GF D WVYP
Sbjct: 252 HFARMFEFFDRTETRTSYPNIFRISNLVLYILVIIHWNACIYYAISKSIGFGVDTWVYPN 311
Query: 216 RVG-EFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
E+ L R+Y+ +YWSTLTLTTIG+ P P D E
Sbjct: 312 ITDPEYGYLAREYIYCLYWSTLTLTTIGETPPPVKDEE 349
>sp|P55934|CNG_ICTPU Cyclic nucleotide-gated cation channel OS=Ictalurus punctatus PE=2
SV=1
Length = 682
Score = 181 bits (460), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 138/239 (57%), Gaps = 4/239 (1%)
Query: 15 PDDGNCHAGRRPRCRRKKVHHSTVVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQ 74
+D + P+ K+ VV+ ++Y+YWL I LYN L+ R F +LQ
Sbjct: 107 ANDQSAAPADAPKKTFKERWEGFVVSQSDDIYYYWLFFIALASLYNWIMLVARACFDQLQ 166
Query: 75 ENGAKFWFFCDYTTDTFIVLDILVQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISL 134
+ W DY D +LD ++ RTGYLEQGL+V + KL +Y+++ F LD +S+
Sbjct: 167 DENFFLWVGLDYLCDVIYILDTCIRLRTGYLEQGLLVKDLAKLRDNYIRTLQFKLDFLSI 226
Query: 135 LPLDLLYFKIGVNPMLRFPRFLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWF 194
LP +LL+F G P LRF R L+ R+++++ E+RT YPN +R+ NL+ +L+ HW
Sbjct: 227 LPTELLFFVTGYVPQLRFNRLLRFSRMFEFFDRTETRTNYPNAFRICNLILYILVIIHWN 286
Query: 195 GCFYYLLSQAEGFYGD-WVYPYRVGEFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
C YY +S+A G D WVY G+ TL+ Y+ YWSTLTLTTIG++P P D E
Sbjct: 287 ACIYYAISKALGLSSDTWVYS---GQNKTLSFCYVYCFYWSTLTLTTIGEMPPPVKDEE 342
>sp|Q16280|CNGA2_HUMAN Cyclic nucleotide-gated olfactory channel OS=Homo sapiens GN=CNGA2
PE=2 SV=2
Length = 664
Score = 179 bits (455), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 144/242 (59%), Gaps = 4/242 (1%)
Query: 14 QPDDGNCHAGRRPRCRRKKVHHSTVVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPEL 73
Q DG + +KK V++P + Y+ WL +I VLYN L+ R F +L
Sbjct: 109 QEGDGKGDKDGEDKGTKKKFEL-FVLDPAGDWYYCWLFVIAMPVLYNWCLLVARACFSDL 167
Query: 74 QENGAKFWFFCDYTTDTFIVLDILVQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIIS 133
Q+ W DY +D + D+ ++ RTG+LEQGL+V ++ KL +Y+ + F LD+ S
Sbjct: 168 QKGYYLVWLVLDYVSDVVYIADLFIRLRTGFLEQGLLVKDTKKLRDNYIHTLQFKLDVAS 227
Query: 134 LLPLDLLYFKIGV-NPMLRFPRFLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAH 192
++P DL+YF + + +P +RF R L R+++++ E+RT YPN++R+ NLV +L+ H
Sbjct: 228 IIPTDLIYFAVDIHSPEVRFNRLLHFARMFEFFDRTETRTNYPNIFRISNLVLYILVIIH 287
Query: 193 WFGCFYYLLSQAEGFYGD-WVYPYRVG-EFSTLTRKYLGSIYWSTLTLTTIGDLPQPETD 250
W C YY +S++ GF D WVYP E+ L R+Y+ +YWSTLTLTTIG+ P P D
Sbjct: 288 WNACIYYAISKSIGFGVDTWVYPNITDPEYGYLAREYIYCLYWSTLTLTTIGETPPPVKD 347
Query: 251 VE 252
E
Sbjct: 348 EE 349
>sp|Q03041|CNGA2_BOVIN Cyclic nucleotide-gated olfactory channel OS=Bos taurus GN=CNGA2
PE=1 SV=1
Length = 663
Score = 179 bits (453), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 141/225 (62%), Gaps = 3/225 (1%)
Query: 31 KKVHHSTVVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDT 90
KK V++P + Y+ WL +I VLYN L+ R F +LQ+ W DY +D
Sbjct: 125 KKKFELFVLDPAGDWYYRWLFLIALPVLYNWCLLVARACFSDLQKGYYIVWLVLDYVSDV 184
Query: 91 FIVLDILVQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGV-NPM 149
+ D+ ++ RTG+LEQGL+V ++ KL +Y+ + F LD+ S++P DL+YF +G+ NP
Sbjct: 185 VYIADLFIRLRTGFLEQGLLVKDTKKLRDNYIHTMQFKLDVASIIPTDLIYFAVGIHNPE 244
Query: 150 LRFPRFLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYG 209
+RF R L R+++++ E+RT YPN++R+ NL+ +LI HW C YY +S++ GF
Sbjct: 245 VRFNRLLHFARMFEFFDRTETRTSYPNIFRISNLILYILIIIHWNACIYYAISKSIGFGV 304
Query: 210 D-WVYPYRVG-EFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
D WVYP E+ L+R+Y+ +YWSTLTLTTIG+ P P D E
Sbjct: 305 DTWVYPNITDPEYGYLSREYIYCLYWSTLTLTTIGETPPPVKDEE 349
>sp|Q64359|CNGA4_RAT Cyclic nucleotide-gated cation channel alpha-4 OS=Rattus norvegicus
GN=Cnga4 PE=2 SV=1
Length = 575
Score = 172 bits (437), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 137/218 (62%), Gaps = 3/218 (1%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
V++P + Y++WL + ++YNL ++ R FP+LQ + WF DYT+D +LDI
Sbjct: 26 VLDPSGDYYYWWLNTMVFPIMYNLIIVVCRACFPDLQHSYLVAWFVLDYTSDLLYLLDIG 85
Query: 98 VQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-PMLRFPRFL 156
V+F TG+LEQG++V + +A YV++ +F+LD+ SL+P D Y ++G + P LR RFL
Sbjct: 86 VRFHTGFLEQGILVVDKGMIASRYVRTWSFLLDLASLVPTDAAYVQLGPHIPTLRLNRFL 145
Query: 157 KVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVYPY 215
+V R+++ + E+RT YPN +R+ L+ + + HW C Y+ LS+ GF D WVYP
Sbjct: 146 RVPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSCLYFALSRYLGFGRDAWVYPD 205
Query: 216 RVGE-FSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
F L R+YL S Y+STL LTT+GD P P+ + E
Sbjct: 206 PAQPGFERLRRQYLYSFYFSTLILTTVGDTPLPDREEE 243
>sp|Q3UW12|CNGA4_MOUSE Cyclic nucleotide-gated cation channel alpha-4 OS=Mus musculus
GN=Cnga4 PE=2 SV=1
Length = 575
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 136/218 (62%), Gaps = 3/218 (1%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
V++P + Y++WL + ++YNL ++ R FP+LQ + WF DYT+D +LDI
Sbjct: 26 VLDPSGDYYYWWLNTMVFPIMYNLIIVVCRACFPDLQHSYLVAWFVLDYTSDLLYLLDIG 85
Query: 98 VQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-PMLRFPRFL 156
V+F TG+LEQG++V + +A YV++ +F+LD+ SL+P D Y ++G + P LR RFL
Sbjct: 86 VRFHTGFLEQGILVVDKSMIASRYVRTWSFLLDLASLVPTDAAYVQLGPHIPTLRLNRFL 145
Query: 157 KVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVYPY 215
+V R+++ + E+RT YPN +R+ L+ + + HW C Y+ LS+ GF D WVYP
Sbjct: 146 RVPRLFEAFDRTETRTAYPNAFRIAKLMIYIFVVIHWNSCLYFALSRYLGFGRDAWVYPD 205
Query: 216 RVGE-FSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
F L R+YL S Y+STL LTT+GD P P + E
Sbjct: 206 PAQPGFERLRRQYLYSFYFSTLILTTVGDTPLPAREEE 243
>sp|Q8IV77|CNGA4_HUMAN Cyclic nucleotide-gated cation channel alpha-4 OS=Homo sapiens
GN=CNGA4 PE=1 SV=3
Length = 575
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 136/218 (62%), Gaps = 3/218 (1%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
V++P + Y++WL + V+YNL L+ R FP+LQ W DYT+D +LD++
Sbjct: 26 VLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMV 85
Query: 98 VQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-PMLRFPRFL 156
V+F TG+LEQG++V + +++ YV++ +F LD+ SL+P D++Y ++G + P LR RFL
Sbjct: 86 VRFHTGFLEQGILVVDKGRISSRYVRTWSFFLDLASLMPTDVVYVRLGPHTPTLRLNRFL 145
Query: 157 KVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVYPY 215
+ R+++ + E+RT YPN +R+ L+ + + HW C Y+ LS+ GF D WVYP
Sbjct: 146 RAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSCLYFALSRYLGFGRDAWVYPD 205
Query: 216 RVGE-FSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
F L R+YL S Y+STL LTT+GD P P + E
Sbjct: 206 PAQPGFERLRRQYLYSFYFSTLILTTVGDTPPPAREEE 243
>sp|Q24278|CNG_DROME Cyclic nucleotide-gated cation channel OS=Drosophila melanogaster
GN=Cng PE=2 SV=2
Length = 665
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 130/225 (57%), Gaps = 11/225 (4%)
Query: 39 VNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDILV 98
V+P ++ WL I++ VLYN+ ++ R F E+ ++ FW+ DY D +LD LV
Sbjct: 100 VDPTLQSHYRWLAIVSLAVLYNIIFVVGRAVFWEINKSAPAFWYTLDYLCDFIYLLDTLV 159
Query: 99 QFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLY----------FKIGVNP 148
G+L+QGL+V ++ +L HY ++ + LD++S+LP DL Y +
Sbjct: 160 HMHEGFLDQGLLVRDAFRLRRHYFHTKGWYLDVLSMLPTDLAYIWWPPETCSSLYLPCPV 219
Query: 149 MLRFPRFLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFY 208
++R R L++ R+++++ E+ T YPN +R+ +V +L+ HW C Y+ +S GF
Sbjct: 220 IVRLNRLLRINRLWEWFDRTETATGYPNAFRICKVVLAILVLIHWNACMYFAISYEIGFS 279
Query: 209 GD-WVYPYRVGEFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
D WVY +TL R+Y+ S YWSTLTLTTIG+ P PE DVE
Sbjct: 280 SDSWVYNLNGTRNNTLQRQYIYSFYWSTLTLTTIGETPTPENDVE 324
>sp|Q28181|CNGB1_BOVIN Cyclic nucleotide-gated cation channel beta-1 OS=Bos taurus
GN=CNGB1 PE=1 SV=1
Length = 1394
Score = 119 bits (297), Expect = 3e-26, Method: Composition-based stats.
Identities = 83/236 (35%), Positives = 115/236 (48%), Gaps = 13/236 (5%)
Query: 20 CHAGRRPRCRRKKVHHSTVVNPDSNL-YFYWLLIITCCVLYNLWTLIVRQSFPELQENGA 78
C RRP KK ++P +NL Y WL + +N W + VR +FP +
Sbjct: 746 CKFKRRPW---KKYQFPQSIDPLTNLMYILWLFFVVLAWNWNCWLIPVRWAFPYQTPDNI 802
Query: 79 KFWFFCDYTTDTFIVLDILV-QFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPL 137
W DY D +LDI V Q R ++ G ++ + ++ +YVKS+ F +D++ LLPL
Sbjct: 803 HLWLLMDYLCDLIYLLDITVFQMRLQFVRGGDIITDKKEMRNNYVKSQRFKMDMLCLLPL 862
Query: 138 DLLYFKIGVNPMLRFPRFLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCF 197
DLLY K GVNP+LR PR LK +++ +ES ++RV+ LL H C
Sbjct: 863 DLLYLKFGVNPLLRLPRCLKYMAFFEFNNRLESILSKAYVYRVIRTTAYLLYSLHLNSCL 922
Query: 198 YYLLSQAEGF-YGDWVYPYRVGEFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
YY S EG WVY + Y+ YW+ TL TIG LP P T E
Sbjct: 923 YYWASAYEGLGSTHWVY-------DGVGNSYIRCYYWAVKTLITIGGLPDPRTLFE 971
>sp|Q8MJD7|CNGB3_CANFA Cyclic nucleotide-gated cation channel beta-3 OS=Canis familiaris
GN=CNGB3 PE=1 SV=1
Length = 782
Score = 117 bits (294), Expect = 6e-26, Method: Composition-based stats.
Identities = 68/202 (33%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 53 ITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLD-ILVQFRTGYLEQGLMV 111
+T +N W + +R FP + +WF D T D + D +L+Q R +++ G ++
Sbjct: 220 VTIAYNWNCWLIPLRLVFPYQTPDNTHYWFITDITCDIIYLCDMLLIQPRLQFIKGGDIM 279
Query: 112 YNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVNPMLRFPRFLKVYRVYDYYYIVESR 171
+S +L HY S F LD+ S++P D+ Y G NP+ R R LK +++ + +ES
Sbjct: 280 VDSNELKRHYRSSTKFQLDVASVMPFDVFYLFFGFNPVFRMNRILKYTSFFEFNHHLESI 339
Query: 172 TVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGF-YGDWVYPYRVGEFSTLTRKYLGS 230
++RV+ LL H C YY S EG WVY GE KYL
Sbjct: 340 MDKAYIYRVIRTTGYLLYTLHINACIYYWASDYEGIGSTKWVYN---GE----GNKYLRC 392
Query: 231 IYWSTLTLTTIGDLPQPETDVE 252
YW+ TL TIG LP+P+T E
Sbjct: 393 YYWAVRTLITIGGLPEPQTSFE 414
>sp|Q9JJZ9|CNGB3_MOUSE Cyclic nucleotide-gated cation channel beta-3 OS=Mus musculus
GN=Cngb3 PE=1 SV=1
Length = 694
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 106/210 (50%), Gaps = 9/210 (4%)
Query: 45 LYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL-VQFRTG 103
+Y WLL++T +N W L VR FP + +W D D + DIL +Q R
Sbjct: 209 VYLLWLLLVTIAYNWNCWLLPVRLVFPCQTPDNKNYWIITDIVCDIIYLCDILLIQPRLQ 268
Query: 104 YLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVNPMLRFPRFLKVYRVYD 163
++ G ++ +S +L +Y S F +D+ SLLP ++LY GVNP+ R R LK ++
Sbjct: 269 FVRGGEIIVDSNELKRNYRSSTKFRMDVASLLPFEVLYIFFGVNPIFRANRILKYTSFFE 328
Query: 164 YYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYG-DWVYPYRVGEFST 222
+ + +ES ++RV+ LL H C YY S EG WVY GE +
Sbjct: 329 FNHHLESIMDKAYVYRVIRTTGYLLFLLHINACVYYWASDYEGIGSTKWVYN---GEGN- 384
Query: 223 LTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
KYL YW+ TL TIG LP+P+T E
Sbjct: 385 ---KYLRCFYWAVRTLITIGGLPEPQTSFE 411
>sp|Q14028|CNGB1_HUMAN Cyclic nucleotide-gated cation channel beta-1 OS=Homo sapiens
GN=CNGB1 PE=1 SV=2
Length = 1251
Score = 113 bits (283), Expect = 1e-24, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 20 CHAGRRPRCRRKKVHHSTVVNPDSNL-YFYWLLIITCCVLYNLWTLIVRQSFPELQENGA 78
C RP KK ++P +NL Y WL + +N W + VR +FP +
Sbjct: 632 CKFKHRPW---KKYQFPQSIDPLTNLMYVLWLFFVVMAWNWNCWLIPVRWAFPYQTPDNI 688
Query: 79 KFWFFCDYTTDTFIVLDILV-QFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIISLLPL 137
W DY D LDI V Q R ++ G ++ + + +Y+KSR F +D++SLLPL
Sbjct: 689 HHWLLMDYLCDLIYFLDITVFQTRLQFVRGGDIITDKKDMRNNYLKSRRFKMDLLSLLPL 748
Query: 138 DLLYFKIGVNPMLRFPRFLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCF 197
D LY K+GVNP+LR PR LK +++ +ES ++RV+ LL H C
Sbjct: 749 DFLYLKVGVNPLLRLPRCLKYMAFFEFNSRLESILSKAYVYRVIRTTAYLLYSLHLNSCL 808
Query: 198 YYLLSQAEGF-YGDWVYPYRVGEFSTLTRKYLGSIYWSTLTLTTIGDLPQPETDVE 252
YY S +G WVY + Y+ Y++ TL TIG LP P+T E
Sbjct: 809 YYWASAYQGLGSTHWVY-------DGVGNSYIRCYYFAVKTLITIGGLPDPKTLFE 857
>sp|Q03611|CNG_CAEEL Cyclic nucleotide-gated cation channel OS=Caenorhabditis elegans
GN=tax-4 PE=2 SV=3
Length = 733
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 138/312 (44%), Gaps = 68/312 (21%)
Query: 9 VGDSGQP---DDGNCHAGRRPR----CRRKKVHHSTVVNPDSNLYFYWLLIITCCVLYNL 61
GQP D G+ P+ R +K + +P ++ ++YW ++T +YNL
Sbjct: 77 AATGGQPASSDGGSAIEVPPPKESYAVRIRKYLANYTQDPSTDNFYYWTCVVTVAYIYNL 136
Query: 62 WTLIVRQSF-----PELQE-----NGA--------------------------------- 78
+I RQ F P Q NG
Sbjct: 137 LFVIARQVFNDLIGPSSQSLCRFYNGTLNSTTQVECTYNMLTNMKEMPTYSQYPDLGWSK 196
Query: 79 -----KFWFFCDYTTDTFIVLDILVQFRTGYLEQGLMVYNSMKLAGHYVKSRAFMLDIIS 133
W F D D ++D + +R GY++QGL+V + K+ Y +S+ + +D IS
Sbjct: 197 YWHFRMLWVFFDLLMDCVYLIDTFLNYRMGYMDQGLVVREAEKVTKAYWQSKQYRIDGIS 256
Query: 134 LLPLDLL------YFKIGVNPMLRFPRFLKVYRVYDYYYIVESRTVYPNLWRVVNLVHIL 187
L+PLD + Y P+LR R ++ RV + E+R+ PN +RVV +V +
Sbjct: 257 LIPLDYILGWPIPYINWRGLPILRLNRLIRYKRVRNCLERTETRSSMPNAFRVVVVVWYI 316
Query: 188 LIFAHWFGCFYYLLSQAEGFYGD-WVYPYRVGEF------STLTRKYLGSIYWSTLTLTT 240
+I HW C Y+ +S+ G D WVY + + TL R+Y+ S YWSTL LTT
Sbjct: 317 VIIIHWNACLYFWISEWIGLGTDAWVYGHLNKQSLPDDITDTLLRRYVYSFYWSTLILTT 376
Query: 241 IGDLPQPETDVE 252
IG++P P ++E
Sbjct: 377 IGEVPSPVRNIE 388
>sp|Q9NQW8|CNGB3_HUMAN Cyclic nucleotide-gated cation channel beta-3 OS=Homo sapiens
GN=CNGB3 PE=1 SV=2
Length = 809
Score = 105 bits (263), Expect = 2e-22, Method: Composition-based stats.
Identities = 64/196 (32%), Positives = 94/196 (47%), Gaps = 9/196 (4%)
Query: 59 YNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL-VQFRTGYLEQGLMVYNSMKL 117
+N + +R FP + +W D D + D+L +Q R ++ G ++ +S +L
Sbjct: 231 WNCCFIPLRLVFPYQTADNIHYWLIADIICDIIYLYDMLFIQPRLQFVRGGDIIVDSNEL 290
Query: 118 AGHYVKSRAFMLDIISLLPLDLLYFKIGVNPMLRFPRFLKVYRVYDYYYIVESRTVYPNL 177
HY S F LD+ S++P D+ Y G NPM R R LK +++ + +ES +
Sbjct: 291 RKHYRTSTKFQLDVASIIPFDICYLFFGFNPMFRANRMLKYTSFFEFNHHLESIMDKAYI 350
Query: 178 WRVVNLVHILLIFAHWFGCFYYLLSQAEGF-YGDWVYPYRVGEFSTLTRKYLGSIYWSTL 236
+RV+ LL H C YY S EG WVY GE +YL YW+
Sbjct: 351 YRVIRTTGYLLFILHINACVYYWASNYEGIGTTRWVYD---GE----GNEYLRCYYWAVR 403
Query: 237 TLTTIGDLPQPETDVE 252
TL TIG LP+P+T E
Sbjct: 404 TLITIGGLPEPQTLFE 419
>sp|O88705|HCN3_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Mus musculus GN=Hcn3 PE=1
SV=1
Length = 779
Score = 77.0 bits (188), Expect = 1e-13, Method: Composition-based stats.
Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 48/249 (19%)
Query: 30 RKKVHHSTVVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTD 89
R K + +++P S+ FYW LI+ ++ NL L V +F +E + W + +D
Sbjct: 76 RVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITF--FKEENSPPWIVFNVLSD 133
Query: 90 TFIVLDILVQFRTG-YLEQGLMVYNSMKLAGHYVKSRA----FMLDIISLLPLDLLYFKI 144
TF +LD+++ FRTG +E+G + LA +++R F++D+IS +P+D ++ +
Sbjct: 134 TFFLLDLVLNFRTGIVVEEGAEIL----LAPRAIRTRYLRTWFLVDLISSIPVDYIFLVV 189
Query: 145 GVNP-----------MLRFPRFLKVY-------------------RVYDYYYIVESRTVY 174
+ P LR RF K+ ++ Y + S V
Sbjct: 190 ELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVV- 248
Query: 175 PNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVYPYRVGEFSTLTRKYLGSIYW 233
R+ NL+ ++L+ HW GC +L+ + F D WV R+ S R+Y +++
Sbjct: 249 ----RIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSMNRMVNHS-WGRQYSHALFK 303
Query: 234 STLTLTTIG 242
+ + IG
Sbjct: 304 AMSHMLCIG 312
>sp|Q9JKA8|HCN3_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Rattus norvegicus GN=Hcn3
PE=2 SV=1
Length = 780
Score = 76.6 bits (187), Expect = 1e-13, Method: Composition-based stats.
Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 48/249 (19%)
Query: 30 RKKVHHSTVVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTD 89
R K + +++P S+ FYW LI+ ++ NL L V +F +E + W + +D
Sbjct: 76 RVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITF--FKEENSPPWIVFNVLSD 133
Query: 90 TFIVLDILVQFRTG-YLEQGLMVYNSMKLAGHYVKSRA----FMLDIISLLPLDLLYFKI 144
TF +LD+++ FRTG +E+G + LA +++R F++D+IS +P+D ++ +
Sbjct: 134 TFFLLDLVLNFRTGIVVEEGAEIL----LAPRAIRTRYLRTWFLVDLISSIPVDYIFLVV 189
Query: 145 GVNP-----------MLRFPRFLKVY-------------------RVYDYYYIVESRTVY 174
+ P LR RF K+ ++ Y + S V
Sbjct: 190 ELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYMHQWEEIFHMTYDLASAVV- 248
Query: 175 PNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WVYPYRVGEFSTLTRKYLGSIYW 233
R+ NL+ ++L+ HW GC +L+ + F D WV R+ S R+Y +++
Sbjct: 249 ----RIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSMNRMVNHS-WGRQYSHALFK 303
Query: 234 STLTLTTIG 242
+ + IG
Sbjct: 304 AMSHMLCIG 312
>sp|Q9P1Z3|HCN3_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Homo sapiens GN=HCN3 PE=2
SV=2
Length = 774
Score = 75.1 bits (183), Expect = 5e-13, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 47/219 (21%)
Query: 30 RKKVHHSTVVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTD 89
R K + +++P S+ FYW LI+ ++ NL L V +F +E + W + +D
Sbjct: 77 RVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITF--FKEENSPPWIVFNVLSD 134
Query: 90 TFIVLDILVQFRTG-YLEQGLMVYNSMKLAGHYVKSRA----FMLDIISLLPLDLLYFKI 144
TF +LD+++ FRTG +E+G + LA +++R F++D+IS +P+D ++ +
Sbjct: 135 TFFLLDLVLNFRTGIVVEEGAEIL----LAPRAIRTRYLRTWFLVDLISSIPVDYIFLVV 190
Query: 145 GVNP-----------MLRFPRFLKVY-------------------RVYDYYYIVESRTVY 174
+ P LR RF K+ ++ Y + S V
Sbjct: 191 ELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVV- 249
Query: 175 PNLWRVVNLVHILLIFAHWFGCFYYLLSQAEGFYGD-WV 212
R+ NL+ ++L+ HW GC +L+ + F D WV
Sbjct: 250 ----RIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWV 284
>sp|Q75HP9|AKT2_ORYSJ Potassium channel AKT2 OS=Oryza sativa subsp. japonica
GN=Os05g0428700 PE=2 SV=1
Length = 855
Score = 73.9 bits (180), Expect = 9e-13, Method: Composition-based stats.
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 39/251 (15%)
Query: 13 GQPDDGNCHAGRR-PRCRRKKVHHSTVVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFP 71
G P G+ +G P RR V++P + Y W + V Y+ W +F
Sbjct: 44 GVPAGGHAQSGHAGPNDRR-------VISPLDSRYRCWDTFMVVLVAYSAWVYPFEVAFM 96
Query: 72 ELQENGAKFWFFCDYTTDTFIVLDILVQFRTGYLEQ--GLMVYNSMKLAGHYVKSRAFML 129
G D D F +DI++ F Y++ L+V + ++A Y+ S F++
Sbjct: 97 NASPKGG--LEVADIVVDLFFAVDIVLTFFVAYIDSRTQLLVRDRRRIATRYL-STFFIM 153
Query: 130 DIISLLPLDLLYF----KIGVNPMLRFPRFLKVYR---VYDYYYIVESRTVYPNLW-RVV 181
D+ S +P L + ++ +P L+++R V ++ +E + W R
Sbjct: 154 DVASTIPFQGLAYIVTGEVRESPAFSLLGILRLWRLRKVKQFFTRLEKDIRFNYFWIRCA 213
Query: 182 NLVHILLIFAHWFGCFYYLLSQAEGFYGDWVYPYR--------VGEF--STLTRKYLGSI 231
L+ + L H GC YYL++ YP+R + +F ++L +Y S+
Sbjct: 214 RLIAVTLFLVHCAGCLYYLIADR--------YPHREKTWIGAVIPDFQEASLWIRYTSSV 265
Query: 232 YWSTLTLTTIG 242
YWS T+TT+G
Sbjct: 266 YWSITTMTTVG 276
>sp|Q9Y3Q4|HCN4_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Homo sapiens GN=HCN4 PE=1
SV=1
Length = 1203
Score = 70.9 bits (172), Expect = 9e-12, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 39/206 (18%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
+++P S+ FYW L + ++ NL + V +F ++ W + +DTF ++D++
Sbjct: 254 IIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FKDENTTPWIVFNVVSDTFFLIDLV 311
Query: 98 VQFRTGYL--EQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-------- 147
+ FRTG + + ++ + ++ Y+KS FM+D IS +P+D ++ +
Sbjct: 312 LNFRTGIVVEDNTEIILDPQRIKMKYLKS-WFMVDFISSIPVDYIFLIVETRIDSEVYKT 370
Query: 148 -PMLRFPRFLKVY-------------------RVYDYYYIVESRTVYPNLWRVVNLVHIL 187
LR RF K+ ++ Y + S V R+VNL+ ++
Sbjct: 371 ARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVV-----RIVNLIGMM 425
Query: 188 LIFAHWFGCFYYLLSQAEGFYGD-WV 212
L+ HW GC +L+ + F D WV
Sbjct: 426 LLLCHWDGCLQFLVPMLQDFPDDCWV 451
>sp|Q38898|AKT2_ARATH Potassium channel AKT2/3 OS=Arabidopsis thaliana GN=AKT2 PE=1 SV=1
Length = 802
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 14/216 (6%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
+++P + Y W + V Y+ W +F L + + D D F +DI+
Sbjct: 67 IISPMDSRYRCWEFYMVLLVAYSAWVYPFEVAF--LNSSPKRNLCIADNIVDLFFAVDIV 124
Query: 98 VQFRTGYLEQ--GLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLL-YFKIGVNPM----- 149
+ F Y+++ L+V ++A Y+ S F++D+ S +P D + Y G + +
Sbjct: 125 LTFFVAYIDERTQLLVREPKQIAVRYL-STWFLMDVASTIPFDAIGYLITGTSTLNITCN 183
Query: 150 -LRFPRFLKVYRVYDYYYIVESRTVYPNLW-RVVNLVHILLIFAHWFGCFYYLLSQAEGF 207
L RF ++ RV + +E Y W R L+ + L H GC YYL++
Sbjct: 184 LLGLLRFWRLRRVKHLFTRLEKDIRYSYFWIRCFRLLSVTLFLVHCAGCSYYLIADRYPH 243
Query: 208 YGD-WVYPYRVGEFSTLTRKYLGSIYWSTLTLTTIG 242
G W ++L+ +Y+ +IYWS T+TT+G
Sbjct: 244 QGKTWTDAIPNFTETSLSIRYIAAIYWSITTMTTVG 279
>sp|Q9JKA7|HCN4_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Rattus norvegicus GN=Hcn4
PE=2 SV=1
Length = 1198
Score = 68.6 bits (166), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 39/206 (18%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
+++P S+ FYW L + ++ NL + V +F ++ W + +DTF ++D++
Sbjct: 254 IIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FKDENTTPWIVFNVVSDTFFLIDLV 311
Query: 98 VQFRTGYL--EQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-------- 147
+ FRTG + + ++ + ++ Y+KS F++D IS +P+D ++ +
Sbjct: 312 LNFRTGIVVEDNTEIILDPQRIKMKYLKS-WFVVDFISSIPVDYIFLIVETRIDSEVYKT 370
Query: 148 -PMLRFPRFLKVY-------------------RVYDYYYIVESRTVYPNLWRVVNLVHIL 187
LR RF K+ ++ Y + S V R+VNL+ ++
Sbjct: 371 ARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVV-----RIVNLIGMM 425
Query: 188 LIFAHWFGCFYYLLSQAEGFYGD-WV 212
L+ HW GC +L+ + F D WV
Sbjct: 426 LLLCHWDGCLQFLVPMLQDFPHDCWV 451
>sp|Q9TV66|HCN4_RABIT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Oryctolagus cuniculus
GN=HCN4 PE=2 SV=1
Length = 1175
Score = 67.4 bits (163), Expect = 9e-11, Method: Composition-based stats.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 39/206 (18%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
+++P S+ FYW L + ++ NL + V +F ++ W + +DTF ++D++
Sbjct: 255 IIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FKDENTTPWIVFNVVSDTFFLIDLV 312
Query: 98 VQFRTGYL--EQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-------- 147
+ FRTG + + ++ + ++ Y+KS F++D +S +P+D ++ +
Sbjct: 313 LNFRTGIVVEDNTDIILDPRRIKMKYLKS-WFVVDFVSSIPVDYIFLIVETRIDSEVYKT 371
Query: 148 -PMLRFPRFLKVY-------------------RVYDYYYIVESRTVYPNLWRVVNLVHIL 187
LR RF K+ ++ Y + S V R+VNL+ ++
Sbjct: 372 ARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVV-----RIVNLIGMM 426
Query: 188 LIFAHWFGCFYYLLSQAEGFYGD-WV 212
L+ HW GC +L+ + F D WV
Sbjct: 427 LLLCHWDGCLQFLVPMLQDFPDDCWV 452
>sp|Q9M8S6|SKOR_ARATH Potassium channel SKOR OS=Arabidopsis thaliana GN=SKOR PE=1 SV=1
Length = 828
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 112/231 (48%), Gaps = 26/231 (11%)
Query: 31 KKVHHSTVVNPDSNLYFYWLLIITCCVLYN-LWTLIVRQSFPELQENGAKFWFFCDYTTD 89
+ + ++V+PD+ Y W + I LY+ +T + F L EN F D
Sbjct: 67 RDISRGSIVHPDNRWYKAWTMFILIWALYSSFFTPLEFGFFRGLPEN----LFILDIAGQ 122
Query: 90 TFIVLDILVQFRTGYLEQGL--MVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN 147
++DI++ F Y + M+Y +A Y+KS F++D+++ +P D++Y G
Sbjct: 123 IAFLVDIVLTFFVAYRDSRTYRMIYKRSSIALRYLKS-TFIIDLLACMPWDIIYKAAGEK 181
Query: 148 PMLRFPRFLKVYRVYD---YYYIVESRTVYPNLW-RVVNLVHILLIFAHWFGCFYYLL-- 201
+R+ +++YRV+ +++ +E L+ R+V L+ + L H C +Y L
Sbjct: 182 EEVRYLLLIRLYRVHRVILFFHKMEKDIRINYLFTRIVKLIFVELYCTHTAACIFYYLAT 241
Query: 202 ---SQAEGFYGDWVYPYRVGEFS-------TLTRKYLGSIYWSTLTLTTIG 242
+ EG+ W+ ++G++S L +Y S+Y++ +T+ T+G
Sbjct: 242 TLPASQEGY--TWIGSLKLGDYSYSKFREIDLWTRYTTSMYFAVVTMATVG 290
>sp|Q653P0|KOR1_ORYSJ Potassium channel KOR1 OS=Oryza sativa subsp. japonica
GN=Os06g0250600 PE=2 SV=1
Length = 858
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 22/222 (9%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYN-LWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDI 96
V++PD+ Y W I +Y+ +T + F L N FF D ++DI
Sbjct: 90 VIDPDNKWYRLWTRFILVWAVYSSFFTPLEFGFFRGLPRN----LFFLDIAGQIAFLIDI 145
Query: 97 LVQFRTGYLEQGL--MVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVNPMLRF-- 152
+++F Y + MV+N +A Y KS +F+ D++ P D +Y G +R+
Sbjct: 146 VLRFFVAYRDPDTYRMVHNPTSIALRYCKS-SFIFDLLGCFPWDAIYKACGSKEEVRYLL 204
Query: 153 -PRFLKVYRVYDYYYIVESRTVYPNLW-RVVNLVHILLIFAHWFGCFYYLLSQA--EGFY 208
R + +V +++ +E L+ R+V L+ + L H C +Y L+ E
Sbjct: 205 WIRLTRAMKVTEFFRSMEKDIRINYLFTRIVKLIVVELYCTHTAACIFYYLATTLPESME 264
Query: 209 G-DWVYPYRVGEFS-------TLTRKYLGSIYWSTLTLTTIG 242
G W+ ++G++S LT++Y+ S+Y++ +T+ T+G
Sbjct: 265 GYTWIGSLQLGDYSYSHFREIDLTKRYMTSLYFAIVTMATVG 306
>sp|Q38998|AKT1_ARATH Potassium channel AKT1 OS=Arabidopsis thaliana GN=AKT1 PE=1 SV=2
Length = 857
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 28/235 (11%)
Query: 20 CHAGRRPRCRRKKVHHSTVVNPDSNLYFYWLLIITCCVLYNLWTL-----IVRQSFPELQ 74
+ RR + RR VV+P + Y W + V+Y W +R+ P L
Sbjct: 37 ARSNRRVKLRR------FVVSPYDHKYRIWEAFLVVLVVYTAWVSPFEFGFLRKPRPPLS 90
Query: 75 ENGAKFWFFCDYTTDTFIVLDILVQFRTGYLEQG--LMVYNSMKLAGHYVKSRAFMLDII 132
D + F +DI++ F GYL++ L+V + ++A Y++S F+LD++
Sbjct: 91 --------ITDNIVNAFFAIDIIMTFFVGYLDKSTYLIVDDRKQIAFKYLRS-WFLLDLV 141
Query: 133 SLLPLDLLYFKIGVNP--MLRFPRFLKVYRVYDYYYIVESRTVYPNLW-RVVNLVHILLI 189
S +P + +I + R ++ RV + +E + W R LV + L
Sbjct: 142 STIPSEA-AMRISSQSYGLFNMLRLWRLRRVGALFARLEKDRNFNYFWVRCAKLVCVTLF 200
Query: 190 FAHWFGCFYYLLSQAEGFYGDWVYPYRVGEF--STLTRKYLGSIYWSTLTLTTIG 242
H CFYYL++ V F +L +Y+ S+YWS TLTT+G
Sbjct: 201 AVHCAACFYYLIAARNSNPAKTWIGANVANFLEESLWMRYVTSMYWSITTLTTVG 255
>sp|O70507|HCN4_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Mus musculus GN=Hcn4 PE=1
SV=2
Length = 1186
Score = 65.5 bits (158), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 95/206 (46%), Gaps = 39/206 (18%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
+++P S+ FYW L + ++ NL + V +F ++ W + +DTF ++D++
Sbjct: 254 IIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FKDENTTPWIVFNVVSDTFFLIDLV 311
Query: 98 VQFRTGYL--EQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVN-------- 147
+ FRTG + + ++ + ++ Y+KS F++D IS +P++ ++ +
Sbjct: 312 LNFRTGIVVEDNTEIILDPQRIKMKYLKS-WFVVDFISSIPVEYIFLIVETRIDSEVYKT 370
Query: 148 -PMLRFPRFLKVY-------------------RVYDYYYIVESRTVYPNLWRVVNLVHIL 187
+R RF K+ ++ Y + S V R+VNL+ ++
Sbjct: 371 ARAVRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVV-----RIVNLIGMM 425
Query: 188 LIFAHWFGCFYYLLSQAEGFYGD-WV 212
L+ HW GC +L+ + F D WV
Sbjct: 426 LLLCHWDGCLQFLVPMLQDFPHDCWV 451
>sp|O60741|HCN1_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Homo sapiens GN=HCN1 PE=2
SV=3
Length = 890
Score = 65.1 bits (157), Expect = 4e-10, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 39/206 (18%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDIL 97
+++P S+ FYW LI+ ++ NL + V +F E W + +DT +LD++
Sbjct: 134 IIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITF--FTEQTTTPWIIFNVASDTVFLLDLI 191
Query: 98 VQFRTGYLEQ--GLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKI--GVNP----- 148
+ FRTG + + ++ + + +Y+KS F++D IS +P+D ++ + G++
Sbjct: 192 MNFRTGTVNEDSSEIILDPKVIKMNYLKS-WFVVDFISSIPVDYIFLIVEKGMDSEVYKT 250
Query: 149 --MLRFPRFLKVY-------------------RVYDYYYIVESRTVYPNLWRVVNLVHIL 187
LR RF K+ ++ Y + S V R+ NL+ ++
Sbjct: 251 ARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVV-----RIFNLIGMM 305
Query: 188 LIFAHWFGCFYYLLSQAEGFYGD-WV 212
L+ HW GC +L+ + F D WV
Sbjct: 306 LLLCHWDGCLQFLVPLLQDFPPDCWV 331
>sp|O88703|HCN2_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Mus musculus GN=Hcn2 PE=1
SV=1
Length = 863
Score = 65.1 bits (157), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 100/209 (47%), Gaps = 29/209 (13%)
Query: 30 RKKVHHSTVVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTD 89
R K + +++P S+ FYW + ++ NL + V +F ++ W + +D
Sbjct: 168 RVKSAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITF--FKDETTAPWIVFNVVSD 225
Query: 90 TFIVLDILVQFRTGYL--EQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKI--G 145
TF ++D+++ FRTG + + ++ + K+ Y+++ F++D +S +P+D ++ + G
Sbjct: 226 TFFLMDLVLNFRTGIVIEDNTEIILDPEKIKKKYLRT-WFVVDFVSSIPVDYIFLIVEKG 284
Query: 146 VNP-------MLRFPRFLKVYRVYDYY-------YIVESRTVY-------PNLWRVVNLV 184
++ LR RF K+ + YI + ++ + R+ NL+
Sbjct: 285 IDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRICNLI 344
Query: 185 HILLIFAHWFGCFYYLLSQAEGFYGD-WV 212
++L+ HW GC +L+ + F D WV
Sbjct: 345 SMMLLLCHWDGCLQFLVPMLQDFPSDCWV 373
>sp|Q9TSZ3|KCNH2_CANFA Potassium voltage-gated channel subfamily H member 2 OS=Canis
familiaris GN=KCNH2 PE=2 SV=1
Length = 1158
Score = 64.7 bits (156), Expect = 6e-10, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 29/179 (16%)
Query: 85 DYTTDTFIVLDILVQFRTGYLEQG-LMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFK 143
D+ D ++DIL+ FRT Y+ +V + ++A HY K F++D+++ +P DLL F
Sbjct: 455 DFIVDIMFIVDILINFRTTYVNANEEVVSHPGRIAVHYFKG-WFLIDMVAAIPFDLLIFG 513
Query: 144 ------IGVNPMLRFPRFLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCF 197
IG+ R R ++V R D Y + ++ L+ + AHW C
Sbjct: 514 SGSEELIGLLKTARLLRLVRVARKLDRYSEYGAAVLFL-------LMCTFALIAHWLACI 566
Query: 198 YYLLSQAEGFYGD----WVY--------PYRVGEFS--TLTRKYLGSIYWSTLTLTTIG 242
+Y + E + D W++ PY ++ KY+ ++Y++ +LT++G
Sbjct: 567 WYAIGNMEQPHMDSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVG 625
>sp|Q9JKA9|HCN2_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Rattus norvegicus GN=Hcn2
PE=2 SV=3
Length = 863
Score = 64.7 bits (156), Expect = 6e-10, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 100/209 (47%), Gaps = 29/209 (13%)
Query: 30 RKKVHHSTVVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTD 89
R K + +++P S+ FYW + ++ NL + V +F ++ W + +D
Sbjct: 168 RVKSAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITF--FKDETTAPWIVFNVVSD 225
Query: 90 TFIVLDILVQFRTGYL--EQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKI--G 145
TF ++D+++ FRTG + + ++ + K+ Y+++ F++D +S +P+D ++ + G
Sbjct: 226 TFFLMDLVLNFRTGIVIEDNTEIILDPEKIKKKYLRT-WFVVDFVSSIPVDYIFLIVEKG 284
Query: 146 VNP-------MLRFPRFLKVYRVYDYY-------YIVESRTVY-------PNLWRVVNLV 184
++ LR RF K+ + YI + ++ + R+ NL+
Sbjct: 285 IDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRICNLI 344
Query: 185 HILLIFAHWFGCFYYLLSQAEGFYGD-WV 212
++L+ HW GC +L+ + F D WV
Sbjct: 345 SMMLLLCHWDGCLQFLVPMLQDFPSDCWV 373
>sp|O35219|KCNH2_MOUSE Potassium voltage-gated channel subfamily H member 2 OS=Mus
musculus GN=Kcnh2 PE=2 SV=2
Length = 1162
Score = 63.2 bits (152), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 29/179 (16%)
Query: 85 DYTTDTFIVLDILVQFRTGYLEQG-LMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFK 143
D D ++DIL+ FRT Y+ +V + ++A HY K F++D+++ +P DLL F
Sbjct: 458 DLIVDIMFIVDILINFRTTYVNANEEVVSHPGRIAVHYFKG-WFLIDMVAAIPFDLLIFG 516
Query: 144 ------IGVNPMLRFPRFLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCF 197
IG+ R R ++V R D Y + ++ L+ + AHW C
Sbjct: 517 SGSEELIGLLKTARLLRLVRVARKLDRYSEYGAAVLFL-------LMCTFALIAHWLACI 569
Query: 198 YYLLSQAEGFYGD----WVY--------PYRVGEFS--TLTRKYLGSIYWSTLTLTTIG 242
+Y + E + D W++ PY ++ KY+ ++Y++ +LT++G
Sbjct: 570 WYAIGNMEQPHMDSHIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVG 628
>sp|Q12809|KCNH2_HUMAN Potassium voltage-gated channel subfamily H member 2 OS=Homo
sapiens GN=KCNH2 PE=1 SV=1
Length = 1159
Score = 63.2 bits (152), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 29/179 (16%)
Query: 85 DYTTDTFIVLDILVQFRTGYLEQG-LMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFK 143
D D ++DIL+ FRT Y+ +V + ++A HY K F++D+++ +P DLL F
Sbjct: 456 DLIVDIMFIVDILINFRTTYVNANEEVVSHPGRIAVHYFKG-WFLIDMVAAIPFDLLIFG 514
Query: 144 ------IGVNPMLRFPRFLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCF 197
IG+ R R ++V R D Y + ++ L+ + AHW C
Sbjct: 515 SGSEELIGLLKTARLLRLVRVARKLDRYSEYGAAVLFL-------LMCTFALIAHWLACI 567
Query: 198 YYLLSQAEGFYGD----WVY--------PYRVGEFS--TLTRKYLGSIYWSTLTLTTIG 242
+Y + E + D W++ PY ++ KY+ ++Y++ +LT++G
Sbjct: 568 WYAIGNMEQPHMDSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVG 626
>sp|O08962|KCNH2_RAT Potassium voltage-gated channel subfamily H member 2 OS=Rattus
norvegicus GN=Kcnh2 PE=1 SV=1
Length = 1163
Score = 62.8 bits (151), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 29/179 (16%)
Query: 85 DYTTDTFIVLDILVQFRTGYLEQG-LMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFK 143
D D ++DIL+ FRT Y+ +V + ++A HY K F++D+++ +P DLL F
Sbjct: 458 DLLVDIMFIVDILINFRTTYVNANEEVVSHPGRIAVHYFKG-WFLIDMVAAIPFDLLIFG 516
Query: 144 ------IGVNPMLRFPRFLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCF 197
IG+ R R ++V R D Y + ++ L+ + AHW C
Sbjct: 517 SGSEELIGLLKTARLLRLVRVARKLDRYSEYGAAVLFL-------LMCTFALIAHWLACI 569
Query: 198 YYLLSQAEGFYGD----WVY--------PYRVGEFS--TLTRKYLGSIYWSTLTLTTIG 242
+Y + E + D W++ PY ++ KY+ ++Y++ +LT++G
Sbjct: 570 WYAIGNMEQPHMDSHIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVG 628
>sp|Q9UL51|HCN2_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Homo sapiens GN=HCN2 PE=1
SV=3
Length = 889
Score = 62.4 bits (150), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 97/203 (47%), Gaps = 28/203 (13%)
Query: 30 RKKVHHSTVVNPDSNLYFYWLLIITCCVLYNLWTLIVRQSFPELQENGAKFWFFCDYTTD 89
R K + +++P S+ FYW + ++ NL + V +F ++ W + +D
Sbjct: 195 RVKSAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITF--FKDETTAPWIVFNVVSD 252
Query: 90 TFIVLDILVQFRTGYL--EQGLMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKI--G 145
TF ++D+++ FRTG + + ++ + K+ Y+++ F++D +S +P+D ++ + G
Sbjct: 253 TFFLMDLVLNFRTGIVIEDNTEIILDPEKIKKKYLRT-WFVVDFVSSIPVDYIFLIVEKG 311
Query: 146 VNP-------MLRFPRFLKVYRVYDYY-------YIVESRTVY-------PNLWRVVNLV 184
++ LR RF K+ + YI + ++ + R+ NL+
Sbjct: 312 IDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRICNLI 371
Query: 185 HILLIFAHWFGCFYYLLSQAEGF 207
++L+ HW GC +L+ + F
Sbjct: 372 SMMLLLCHWDGCLQFLVPMLQDF 394
>sp|O54852|KCNH7_RAT Potassium voltage-gated channel subfamily H member 7 OS=Rattus
norvegicus GN=Kcnh7 PE=1 SV=1
Length = 1195
Score = 62.4 bits (150), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 85 DYTTDTFIVLDILVQFRTGYLEQG-LMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFK 143
D D ++DIL+ FRT Y+ Q +V + K+A HY K F++D+++ +P DLL F
Sbjct: 455 DLIVDIMFIIDILINFRTTYVNQNEEVVSDPAKIAVHYFKG-WFLIDMVAAIPFDLLIFG 513
Query: 144 IGVNPMLRFPRFLKVYRVYDYYYIVESRTVYPNLWRVV--NLVHILLIFAHWFGCFYYLL 201
G + LK R+ + Y V L+ I + AHW C +Y +
Sbjct: 514 SGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLMLLMCIFALIAHWLACIWYAI 573
Query: 202 SQAEGFYGDWVYPY---RVGEFSTL-------------------TRKYLGSIYWSTLTLT 239
E PY ++G +L KY+ ++Y++ +LT
Sbjct: 574 GNVE-------RPYLTDKIGWLDSLGTQIGKRYNDSDSSSGPSIKDKYVTALYFTFSSLT 626
Query: 240 TIG 242
++G
Sbjct: 627 SVG 629
>sp|Q8WNY2|KCNH2_RABIT Potassium voltage-gated channel subfamily H member 2 OS=Oryctolagus
cuniculus GN=KCNH2 PE=2 SV=3
Length = 1161
Score = 61.2 bits (147), Expect = 6e-09, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 85 DYTTDTFIVLDILVQFRTGYLEQG-LMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFK 143
D D ++DIL+ FRT Y+ +V + ++A HY K F++D+++ +P DLL F
Sbjct: 458 DLIVDIMFIVDILINFRTTYVNANEEVVSHPGRIAVHYFKG-WFLIDMVAAIPFDLLIFG 516
Query: 144 ------IGVNPMLRFPRFLKVYRVYDYYYIVESRTVYPNLWRVVNLVHILLIFAHWFGCF 197
IG+ R R ++V R D Y + ++ L+ + AHW C
Sbjct: 517 SGSEELIGLLKTARLLRLVRVARKLDRYSEYGAAV-------LLLLMCTFALIAHWLACI 569
Query: 198 YYLLSQAEGFYGD----WVY--------PYRVGEFS--TLTRKYLGSIYWSTLTLTTIG 242
+Y + E + D W++ PY ++ KY+ +Y++ +LT++G
Sbjct: 570 WYAIGNMEQPHMDSRIGWLHNLGDQMGKPYNSSGLGGPSIKDKYVTGLYFTFSSLTSVG 628
>sp|Q94A76|GORK_ARATH Potassium channel GORK OS=Arabidopsis thaliana GN=GORK PE=1 SV=2
Length = 820
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 26/224 (11%)
Query: 38 VVNPDSNLYFYWLLIITCCVLYN-LWTLIVRQSFPELQENGAKFWFFCDYTTDTFIVLDI 96
+++P + Y W + I +Y+ L+T + F L E F D ++DI
Sbjct: 57 IIHPKNRWYKAWEMFILVWAIYSSLFTPMEFGFFRGLPER----LFVLDIVGQIAFLVDI 112
Query: 97 LVQFRTGYLEQGL--MVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFKIGVNPMLRF-- 152
++QF Y + VY ++A Y+KS F++D I P DL+Y G + ++R+
Sbjct: 113 VLQFFVAYRDTQTYRTVYKPTRIAFRYLKSH-FLMDFIGCFPWDLIYKASGKHELVRYLL 171
Query: 153 -PRFLKVYRVYDYYYIVESRTVYPNLW-RVVNLVHILLIFAHWFGCFYYLLS-----QAE 205
R +V +V +++ +E T L+ R++ L+ + + H C +Y L+ + E
Sbjct: 172 WIRLFRVRKVVEFFQRLEKDTRINYLFTRILKLLFVEVYCTHTAACIFYYLATTLPPENE 231
Query: 206 GFYGDWVYPYRVGEFS-------TLTRKYLGSIYWSTLTLTTIG 242
G+ W+ ++G++S L ++Y ++Y++ +T+ T+G
Sbjct: 232 GY--TWIGSLKLGDYSYENFREIDLWKRYTTALYFAIVTMATVG 273
>sp|Q9NS40|KCNH7_HUMAN Potassium voltage-gated channel subfamily H member 7 OS=Homo
sapiens GN=KCNH7 PE=2 SV=2
Length = 1196
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 19/176 (10%)
Query: 85 DYTTDTFIVLDILVQFRTGYLEQG-LMVYNSMKLAGHYVKSRAFMLDIISLLPLDLLYFK 143
D D ++DIL+ FRT Y+ Q +V + K+A HY K F++D+++ +P DLL F
Sbjct: 455 DLIVDIMFIIDILINFRTTYVNQNEEVVSDPAKIAIHYFKG-WFLIDMVAAIPFDLLIFG 513
Query: 144 IGVNPMLRFPRFLKVYRVYDYYYIVESRTVYPNLWRVV--NLVHILLIFAHWFGCFYYLL 201
G + LK R+ + Y V L+ I + AHW C +Y +
Sbjct: 514 SGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLMLLMCIFALIAHWLACIWYAI 573
Query: 202 SQAEGFY---------------GDWVYPYRVGEFSTLTRKYLGSIYWSTLTLTTIG 242
E Y G ++ KY+ ++Y++ +LT++G
Sbjct: 574 GNVERPYLTDKIGWLDSLGQQIGKRYNDSDSSSGPSIKDKYVTALYFTFSSLTSVG 629
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.145 0.481
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,896,229
Number of Sequences: 539616
Number of extensions: 4251791
Number of successful extensions: 10287
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 10066
Number of HSP's gapped (non-prelim): 121
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)