Query psy16087
Match_columns 252
No_of_seqs 126 out of 1698
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 20:33:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16087.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16087hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vw7_A Proteinase-activated re 99.9 6.5E-29 2.2E-33 220.0 4.1 192 5-196 4-220 (484)
2 3odu_A C-X-C chemokine recepto 99.9 5.2E-29 1.8E-33 221.6 2.7 182 17-198 47-243 (502)
3 4grv_A Neurotensin receptor ty 99.9 5.1E-28 1.7E-32 216.6 8.4 180 19-198 33-239 (510)
4 3uon_A Human M2 muscarinic ace 99.9 4E-28 1.4E-32 213.9 3.7 182 18-199 23-221 (467)
5 4dkl_A MU-type opioid receptor 99.9 1.4E-28 4.8E-33 216.5 0.5 183 16-198 15-215 (464)
6 2z73_A Rhodopsin; visual pigme 99.9 7.2E-27 2.5E-31 205.5 11.3 186 18-203 34-239 (448)
7 4amj_A Beta-1 adrenergic recep 99.9 4.2E-28 1.4E-32 202.8 2.5 184 16-199 9-212 (315)
8 3rze_A Histamine H1 receptor, 99.9 4.9E-28 1.7E-32 212.5 0.9 179 19-197 9-204 (452)
9 2rh1_A Beta-2-adrenergic recep 99.9 8.3E-27 2.9E-31 208.2 8.3 181 17-197 39-239 (500)
10 3v2y_A Sphingosine 1-phosphate 99.9 4.3E-26 1.5E-30 204.6 12.7 174 19-195 64-250 (520)
11 2ks9_A Substance-P receptor; w 99.9 1.4E-26 4.7E-31 198.0 9.1 179 14-194 27-226 (364)
12 4ea3_A Fusion protein of nocic 99.9 1.2E-26 4E-31 203.6 8.6 182 13-194 120-319 (434)
13 3sn6_R Lysozyme, beta-2 adrene 99.9 6.3E-27 2.2E-31 209.6 6.3 186 17-202 181-386 (514)
14 3pbl_A D(3) dopamine receptor, 99.9 1.2E-27 4E-32 211.8 0.5 178 18-197 38-230 (481)
15 2lnl_A C-X-C chemokine recepto 99.9 5.8E-26 2E-30 189.2 8.8 176 17-193 10-203 (296)
16 3eml_A Human adenosine A2A rec 99.9 1.7E-26 5.8E-31 204.4 5.8 181 18-199 21-227 (488)
17 1u19_A Rhodopsin; G protein-co 99.9 9.8E-27 3.3E-31 197.5 2.2 177 18-195 38-235 (349)
18 4eiy_A Adenosine receptor A2A/ 99.9 1.5E-26 5.3E-31 202.7 0.3 181 18-199 31-237 (447)
19 1hll_A Alpha-2A adrenergic rec 98.8 1.3E-09 4.4E-14 59.0 1.9 31 93-123 2-32 (32)
20 2lot_A Apelin receptor; membra 93.0 0.0042 1.4E-07 38.4 -2.8 30 20-49 30-59 (64)
21 2rdd_B UPF0092 membrane protei 45.2 31 0.0011 18.2 3.4 23 174-196 6-29 (37)
22 2ks9_A Substance-P receptor; w 41.5 1.2E+02 0.004 24.3 8.3 34 9-42 95-128 (364)
23 3arc_I Photosystem II reaction 41.2 23 0.00079 18.8 2.4 21 16-36 6-26 (38)
24 3pbl_A D(3) dopamine receptor, 34.6 1.6E+02 0.0055 24.6 8.3 34 9-42 102-135 (481)
25 3vw7_A Proteinase-activated re 29.8 24 0.00083 29.9 2.2 34 9-42 83-116 (484)
26 3uon_A Human M2 muscarinic ace 28.6 1.9E+02 0.0064 24.0 7.6 34 9-42 86-119 (467)
27 4ea3_A Fusion protein of nocic 24.9 2.3E+02 0.008 23.4 7.5 34 9-42 187-220 (434)
28 3rze_A Histamine H1 receptor, 23.3 2.3E+02 0.0078 23.3 7.2 34 9-42 71-104 (452)
29 3arc_M Photosystem II reaction 21.1 1E+02 0.0036 16.2 3.4 21 167-187 9-29 (36)
30 2jx4_A Vasopressin V2 receptor 20.7 46 0.0016 19.0 1.5 14 184-197 2-15 (52)
31 3eml_A Human adenosine A2A rec 20.0 3.4E+02 0.012 22.4 7.7 32 11-42 84-115 (488)
No 1
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.95 E-value=6.5e-29 Score=220.04 Aligned_cols=192 Identities=24% Similarity=0.315 Sum_probs=150.6
Q ss_pred EEEEcCccC---CchhhHHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeeeh---------hhh-HHH-Hhc
Q psy16087 5 KLQVNGKWG---LPDFVCDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSVY---------LPF-VYL-QVN 70 (252)
Q Consensus 5 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l~---------~p~-~~~-~~~ 70 (252)
||..++... .+....++.+++.+++++|++||+++++++.+++++|+++|+|++|++ +|+ ... ...
T Consensus 4 ~f~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~~ 83 (484)
T 3vw7_A 4 AFISEDASGYLTSSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSG 83 (484)
T ss_dssp -----CHHHHHTCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTT
T ss_pred cccCCCCccCcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444555432 334566788889999999999999999999999999999999998843 444 333 334
Q ss_pred CccccccccchHhhHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhcccccC-
Q psy16087 71 GKWGLPDFVCDFYIAMDVMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNNT- 149 (252)
Q Consensus 71 ~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~- 149 (252)
+.|.+|+..|++..++..++..+|++++++||+|||+||++|++|+..++++++..+++++|++++++++|+++.+...
T Consensus 84 ~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~ 163 (484)
T 3vw7_A 84 SDWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQ 163 (484)
T ss_dssp SCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEE
T ss_pred CCcccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999998876552
Q ss_pred -CCCCCcceeeeccc---------hhhhhHHHHhhHHHHHHHHHHHHHHHHHHHhHH
Q psy16087 150 -PDRVPDLCLFYSSD---------FIIYSSLSSFYIPCIIMVFLYYNIFKALSKRAK 196 (252)
Q Consensus 150 -~~~~~~~C~~~~~~---------~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~~ 196 (252)
+......|...... |.....++.+++|+++|+++|.+|++.++++.+
T Consensus 164 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~ 220 (484)
T 3vw7_A 164 VPGLGITTCHDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSAN 220 (484)
T ss_dssp ETTTTEEEESSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred cCCCCCceeeccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhH
Confidence 23334567654322 445556788999999999999999999998764
No 2
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.95 E-value=5.2e-29 Score=221.61 Aligned_cols=182 Identities=18% Similarity=0.250 Sum_probs=156.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeee---------hhhhHHHHhcCccccccccchHhhHHH
Q psy16087 17 FVCDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSV---------YLPFVYLQVNGKWGLPDFVCDFYIAMD 87 (252)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l---------~~p~~~~~~~~~~~~~~~~C~~~~~~~ 87 (252)
...++.+++.+++++|++||+++++++.+++++|+++|+|++|+ .+|+........|.+|+..|++..++.
T Consensus 47 ~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~p~~~~~~~~~~~~~~~~C~~~~~~~ 126 (502)
T 3odu_A 47 NKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIY 126 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCchhhhhHHHHH
Confidence 35667888899999999999999999999999999999999874 456633344558999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhcccccCCCCCCcceeeeccc----
Q psy16087 88 VMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNNTPDRVPDLCLFYSSD---- 163 (252)
Q Consensus 88 ~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~C~~~~~~---- 163 (252)
.++..+|++++++||+|||+||++|++|+..++++++..+++++|++++++++|+++........+...|.....+
T Consensus 127 ~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ 206 (502)
T 3odu_A 127 TVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYPNDLWV 206 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECSSSEEEEECCSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccCCceEEeecCCchhHH
Confidence 9999999999999999999999999999999999999999999999999999999887666555566778865443
Q ss_pred --hhhhhHHHHhhHHHHHHHHHHHHHHHHHHHhHHhH
Q psy16087 164 --FIIYSSLSSFYIPCIIMVFLYYNIFKALSKRAKKA 198 (252)
Q Consensus 164 --~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~~~~ 198 (252)
|.+...++.+++|+++++++|.+|+++++++.++.
T Consensus 207 ~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~ 243 (502)
T 3odu_A 207 VVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNI 243 (502)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Confidence 45555677889999999999999999999875543
No 3
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.94 E-value=5.1e-28 Score=216.63 Aligned_cols=180 Identities=18% Similarity=0.268 Sum_probs=144.8
Q ss_pred HHHHHHHHHHHHHHhhhhheeeeeeccccc---cccccceeeeee----------hhhh-HHHHh--cCccccccccchH
Q psy16087 19 CDFYIAMDVMCSTSSIFNLVAISIDRGKLC---FTKFSNVFLLSV----------YLPF-VYLQV--NGKWGLPDFVCDF 82 (252)
Q Consensus 19 ~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~---~~~~~~~li~~l----------~~p~-~~~~~--~~~~~~~~~~C~~ 82 (252)
.++.++|.+++++|++||+++++++.++++ +++++|+|++|+ ++|+ ++..+ .+.|.+|+..|++
T Consensus 33 v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C~~ 112 (510)
T 4grv_A 33 VLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRG 112 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHHHH
Confidence 456677889999999999999988876654 457889998773 4566 33333 3569999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhcccccCC------CCCCcc
Q psy16087 83 YIAMDVMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNNTP------DRVPDL 156 (252)
Q Consensus 83 ~~~~~~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~------~~~~~~ 156 (252)
..++..++..+|++++++||+|||+||++|++|+..++++++..+++++|++++++++|+++.+.... ......
T Consensus 113 ~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~ 192 (510)
T 4grv_A 113 YYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGLV 192 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSCCGGGEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999988664321 112234
Q ss_pred eeeeccc-----hhhhhHHHHhhHHHHHHHHHHHHHHHHHHHhHHhH
Q psy16087 157 CLFYSSD-----FIIYSSLSSFYIPCIIMVFLYYNIFKALSKRAKKA 198 (252)
Q Consensus 157 C~~~~~~-----~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~~~~ 198 (252)
|....+. |..+.+++.|++|+++|+++|.+|++.++++.+..
T Consensus 193 c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~ 239 (510)
T 4grv_A 193 CTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIF 239 (510)
T ss_dssp EEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHH
T ss_pred cccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhh
Confidence 5544332 55556677899999999999999999999765433
No 4
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.94 E-value=4e-28 Score=213.91 Aligned_cols=182 Identities=25% Similarity=0.451 Sum_probs=155.3
Q ss_pred hHHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeee----------hhhh-HHHHhcCccccccccchHhhHH
Q psy16087 18 VCDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSV----------YLPF-VYLQVNGKWGLPDFVCDFYIAM 86 (252)
Q Consensus 18 ~~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l----------~~p~-~~~~~~~~~~~~~~~C~~~~~~ 86 (252)
..++.+++.+++++|++||+++++++.+++++|+++|+|++|+ .+|+ +.....+.|.+|+..|++..++
T Consensus 23 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 102 (467)
T 3uon_A 23 VVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLAL 102 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHHHH
Confidence 4567788889999999999999999999999999999999874 4455 5666778999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhccccc---CCCCCCcceeeecc-
Q psy16087 87 DVMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNN---TPDRVPDLCLFYSS- 162 (252)
Q Consensus 87 ~~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~---~~~~~~~~C~~~~~- 162 (252)
..++..+|++++++||+|||+||++|++|+...+++++..+++++|++++++++|+++.+.. ........|.....
T Consensus 103 ~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 182 (467)
T 3uon_A 103 DYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFS 182 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCCGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcceeecCc
Confidence 99999999999999999999999999999999999999999999999999999998876543 22334456776543
Q ss_pred --chhhhhHHHHhhHHHHHHHHHHHHHHHHHHHhHHhHH
Q psy16087 163 --DFIIYSSLSSFYIPCIIMVFLYYNIFKALSKRAKKAK 199 (252)
Q Consensus 163 --~~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~~~~~ 199 (252)
.+.....++.+++|+++++++|.+|++.+|++.++.+
T Consensus 183 ~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~ 221 (467)
T 3uon_A 183 NAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFE 221 (467)
T ss_dssp SHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 2566667888999999999999999999998765443
No 5
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.94 E-value=1.4e-28 Score=216.51 Aligned_cols=183 Identities=22% Similarity=0.372 Sum_probs=156.3
Q ss_pred hhhHHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeee---------hhhh-HHHHhcCccccccccchHhhH
Q psy16087 16 DFVCDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSV---------YLPF-VYLQVNGKWGLPDFVCDFYIA 85 (252)
Q Consensus 16 ~~~~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l---------~~p~-~~~~~~~~~~~~~~~C~~~~~ 85 (252)
....++.+++.+++++|++||+++++++.+++++|+++|+|++|+ .+|+ +.....+.|.+|+..|++..+
T Consensus 15 ~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 94 (464)
T 4dkl_A 15 VTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGNILCKIVIS 94 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhHHH
Confidence 446678888999999999999999999999999999999999874 3566 566677889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhcccccCCCCCCcceeeeccc--
Q psy16087 86 MDVMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNNTPDRVPDLCLFYSSD-- 163 (252)
Q Consensus 86 ~~~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~C~~~~~~-- 163 (252)
+..++..+|++++++||+|||+||++|++|+..++++++..+++++|++++++++|+++........+...|......
T Consensus 95 ~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~ 174 (464)
T 4dkl_A 95 IDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPT 174 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETTEEECCBCCSSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCCCceEEeecCCcc
Confidence 999999999999999999999999999999999999999999999999999999998876555444455567654322
Q ss_pred ------hhhhhHHHHhhHHHHHHHHHHHHHHHHHHHhHHhH
Q psy16087 164 ------FIIYSSLSSFYIPCIIMVFLYYNIFKALSKRAKKA 198 (252)
Q Consensus 164 ------~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~~~~ 198 (252)
+.+...++.+++|+++++++|.+|++.+|+++++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~ 215 (464)
T 4dkl_A 175 WYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIF 215 (464)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 45556677889999999999999999998765533
No 6
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.94 E-value=7.2e-27 Score=205.52 Aligned_cols=186 Identities=23% Similarity=0.345 Sum_probs=154.9
Q ss_pred hHHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeeeh-----------hhh-HHHHhcCccccccccchHhhH
Q psy16087 18 VCDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSVY-----------LPF-VYLQVNGKWGLPDFVCDFYIA 85 (252)
Q Consensus 18 ~~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l~-----------~p~-~~~~~~~~~~~~~~~C~~~~~ 85 (252)
...+.+++.+++++|++||+++++++.+++++|+++|+++++++ +|+ +.....+.|.+++..|++..+
T Consensus 34 ~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 113 (448)
T 2z73_A 34 YYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGF 113 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHHHH
Confidence 34466778889999999999999999988999999999998843 344 445566789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhcccccC-CCCCCcceeeecc--
Q psy16087 86 MDVMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNNT-PDRVPDLCLFYSS-- 162 (252)
Q Consensus 86 ~~~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~-~~~~~~~C~~~~~-- 162 (252)
+..++..+|++++++||+|||++|++|++|++..+++++..+++++|++++++++++++.+... .+.....|..+..
T Consensus 114 ~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 193 (448)
T 2z73_A 114 IGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISR 193 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSSSEEECCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCceeEecccccC
Confidence 9999999999999999999999999999999999999999999999999999999988876552 2334456765432
Q ss_pred -----chhhhhHHHHhhHHHHHHHHHHHHHHHHHHHhHHhHHhccC
Q psy16087 163 -----DFIIYSSLSSFYIPCIIMVFLYYNIFKALSKRAKKAKAARK 203 (252)
Q Consensus 163 -----~~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~~~~~~~~~ 203 (252)
.+.....++.+++|+++++++|.+|++.++++.++.++..+
T Consensus 194 ~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~ 239 (448)
T 2z73_A 194 DSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAK 239 (448)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHT
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 14445556678899999999999999999998877765433
No 7
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.94 E-value=4.2e-28 Score=202.79 Aligned_cols=184 Identities=28% Similarity=0.504 Sum_probs=149.2
Q ss_pred hhhHHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeee----------hhhh-HHHHhcCccccccccchHhh
Q psy16087 16 DFVCDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSV----------YLPF-VYLQVNGKWGLPDFVCDFYI 84 (252)
Q Consensus 16 ~~~~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l----------~~p~-~~~~~~~~~~~~~~~C~~~~ 84 (252)
.....+.+++.+++++|++||++++.++.+++++|+++|++++|+ .+|+ ......+.|.+|+..|++..
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 88 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWT 88 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHH
Confidence 455677888899999999999999999999999999999998773 4566 56667789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhcccccCC-CCCCcceeee---
Q psy16087 85 AMDVMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNNTP-DRVPDLCLFY--- 160 (252)
Q Consensus 85 ~~~~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~-~~~~~~C~~~--- 160 (252)
++...+..+|.++++++|+|||+||++|++|++..+++++...++++|+.+++.+.|+.+...... ......|..+
T Consensus 89 ~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 168 (315)
T 4amj_A 89 SLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGC 168 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCcccccccccc
Confidence 999999999999999999999999999999998899999999999999999999988876543322 1111223221
Q ss_pred -----ccchhhhhHHHHhhHHHHHHHHHHHHHHHHHHHhHHhHH
Q psy16087 161 -----SSDFIIYSSLSSFYIPCIIMVFLYYNIFKALSKRAKKAK 199 (252)
Q Consensus 161 -----~~~~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~~~~~ 199 (252)
...|.....++.+++|++++.++|.+|++.+|++.++.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~ 212 (315)
T 4amj_A 169 CDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKID 212 (315)
T ss_dssp CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC-----
T ss_pred chhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 223566666777889999999999999999998766544
No 8
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.93 E-value=4.9e-28 Score=212.49 Aligned_cols=179 Identities=27% Similarity=0.520 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeee----------hhhh-HHHHhcCccccccccchHhhHHH
Q psy16087 19 CDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSV----------YLPF-VYLQVNGKWGLPDFVCDFYIAMD 87 (252)
Q Consensus 19 ~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l----------~~p~-~~~~~~~~~~~~~~~C~~~~~~~ 87 (252)
..+.+++.+++++|++||+++++++.+++++|+++|++++|+ .+|+ +.....+.|.+|+..|++..++.
T Consensus 9 ~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 88 (452)
T 3rze_A 9 MPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMD 88 (452)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHHH
Confidence 345677889999999999999999999999999999999874 3566 55666789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhcccccCC---CCCCcceeeeccc-
Q psy16087 88 VMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNNTP---DRVPDLCLFYSSD- 163 (252)
Q Consensus 88 ~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~---~~~~~~C~~~~~~- 163 (252)
.++..+|++++++||+|||+||++|++|+..++++++..+++++|++++++++|.+....... ......|..+...
T Consensus 89 ~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~ 168 (452)
T 3rze_A 89 YVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCETDFYDV 168 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-------CCSSSSCCSCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCeecCCCccc
Confidence 999999999999999999999999999999999999999999999999999888554322222 1245567654433
Q ss_pred --hhhhhHHHHhhHHHHHHHHHHHHHHHHHHHhHHh
Q psy16087 164 --FIIYSSLSSFYIPCIIMVFLYYNIFKALSKRAKK 197 (252)
Q Consensus 164 --~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~~~ 197 (252)
|.....++.+++|+++++++|.+|++.+|++.++
T Consensus 169 ~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~ 204 (452)
T 3rze_A 169 TWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNI 204 (452)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 5566678889999999999999999999887444
No 9
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.93 E-value=8.3e-27 Score=208.16 Aligned_cols=181 Identities=27% Similarity=0.513 Sum_probs=148.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeee----------hhhh-HHHHhcCccccccccchHhhH
Q psy16087 17 FVCDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSV----------YLPF-VYLQVNGKWGLPDFVCDFYIA 85 (252)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l----------~~p~-~~~~~~~~~~~~~~~C~~~~~ 85 (252)
....+.+++.+++++|++||+++++++.+++++|+++|+|++|+ .+|+ +.....+.|.+|+..|++..+
T Consensus 39 ~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~~ 118 (500)
T 2rh1_A 39 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTS 118 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHHH
Confidence 34556778889999999999999999999999999999999873 4566 555667899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchh-cccccCCCCCCcceee-----
Q psy16087 86 MDVMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIV-LGLNNTPDRVPDLCLF----- 159 (252)
Q Consensus 86 ~~~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~-~~~~~~~~~~~~~C~~----- 159 (252)
+..++..+|++++++||+|||+||++|++|++.++++++..+++++|+++++++++|. +.+..........|..
T Consensus 119 ~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~ 198 (500)
T 2rh1_A 119 IDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCC 198 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccccCcceeccccccc
Confidence 9999999999999999999999999999999999999999999999999999986444 4433322111112321
Q ss_pred --e-ccchhhhhHHHHhhHHHHHHHHHHHHHHHHHHHhHHh
Q psy16087 160 --Y-SSDFIIYSSLSSFYIPCIIMVFLYYNIFKALSKRAKK 197 (252)
Q Consensus 160 --~-~~~~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~~~ 197 (252)
. ...|.+...++.+++|+++|+++|.+|++.+|++.++
T Consensus 199 ~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~ 239 (500)
T 2rh1_A 199 DFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNI 239 (500)
T ss_dssp CCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2236666677889999999999999999999987655
No 10
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.93 E-value=4.3e-26 Score=204.59 Aligned_cols=174 Identities=21% Similarity=0.288 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeeehh----------hhHHHHhcCccccccccchHhhHHHH
Q psy16087 19 CDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSVYL----------PFVYLQVNGKWGLPDFVCDFYIAMDV 88 (252)
Q Consensus 19 ~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l~~----------p~~~~~~~~~~~~~~~~C~~~~~~~~ 88 (252)
.++.+++.+++++|++||+++++++.+++++|+++|+|++|+++ |.........|.++...|++..++..
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~~~~~~~~~~~~c~~~~~~~~ 143 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGATTYKLTPAQWFLREGSMF 143 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGGTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeCccccchHHHHHH
Confidence 56788899999999999999999999999999999999998544 33222345678899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhcccccCCCCCCcceeeecc---chh
Q psy16087 89 MCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNNTPDRVPDLCLFYSS---DFI 165 (252)
Q Consensus 89 ~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~C~~~~~---~~~ 165 (252)
++.++|++++++||+|||+||+ |++|+..++++++..+++++|++++++++|+++++... ++...|....+ .+.
T Consensus 144 ~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~--~~~~~C~~~~~~~~~~~ 220 (520)
T 3v2y_A 144 VALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI--SALSSCSTVLPLYHKHY 220 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT--TCGGGBCSSSTTBBHHH
T ss_pred HHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc--cCCCcccccCCccchHH
Confidence 9999999999999999999999 99999999999999999999999999999999877665 34457876543 233
Q ss_pred hhhHHHHhhHHHHHHHHHHHHHHHHHHHhH
Q psy16087 166 IYSSLSSFYIPCIIMVFLYYNIFKALSKRA 195 (252)
Q Consensus 166 ~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~ 195 (252)
....++.|++|+++|+++|.+|++.+|+++
T Consensus 221 ~~~~~~~~~lPl~ii~~~Y~~I~~~l~~~~ 250 (520)
T 3v2y_A 221 ILFCTTVFTLLLLSIVILYCRIYSLVRTRN 250 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 444556789999999999999999999886
No 11
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.93 E-value=1.4e-26 Score=198.02 Aligned_cols=179 Identities=18% Similarity=0.319 Sum_probs=146.4
Q ss_pred CchhhH-HHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeeeh----------hhh-HHHHhcCccccccccch
Q psy16087 14 LPDFVC-DFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSVY----------LPF-VYLQVNGKWGLPDFVCD 81 (252)
Q Consensus 14 ~~~~~~-~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l~----------~p~-~~~~~~~~~~~~~~~C~ 81 (252)
.+.+.. .+.+++.+++++|++||+++++++.+++++|+++|++++|++ +|. +.....+.|.+|+..|+
T Consensus 27 ~~~~~~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~ 106 (364)
T 2ks9_A 27 QPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCK 106 (364)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHH
Confidence 334443 347788899999999999999999999999999999998743 455 45556788999999999
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhcccccCCCCCCcceeeec
Q psy16087 82 FYIAMDVMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNNTPDRVPDLCLFYS 161 (252)
Q Consensus 82 ~~~~~~~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~C~~~~ 161 (252)
+..++...+..+|++++++||+|||+||++|++|+ .+++++...++++|+++++.++|...........+...|..+.
T Consensus 107 ~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~ 184 (364)
T 2ks9_A 107 FHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEW 184 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCTTCSSBCCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHHhhheecCCCCEEeecC
Confidence 99999999999999999999999999999999975 5788899999999999999999887544444444555676543
Q ss_pred c---------chhhhhHHHHhhHHHHHHHHHHHHHHHHHHHh
Q psy16087 162 S---------DFIIYSSLSSFYIPCIIMVFLYYNIFKALSKR 194 (252)
Q Consensus 162 ~---------~~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~ 194 (252)
. .|.....++.+++|++++.++|.+|++.++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~ 226 (364)
T 2ks9_A 185 PEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWAS 226 (364)
T ss_dssp SCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSC
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2 24455567788999999999999999998754
No 12
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.93 E-value=1.2e-26 Score=203.58 Aligned_cols=182 Identities=21% Similarity=0.347 Sum_probs=147.0
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeee---------hhhh-HHHHhcCccccccccchH
Q psy16087 13 GLPDFVCDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSV---------YLPF-VYLQVNGKWGLPDFVCDF 82 (252)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l---------~~p~-~~~~~~~~~~~~~~~C~~ 82 (252)
.-+.....+.+++.+++++|++||+++++++.+++++|+++|++++++ .+|+ ......+.|.+|...|++
T Consensus 120 ~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~~~~~p~~~~~~~~~~~~~~~~~C~~ 199 (434)
T 4ea3_A 120 LPLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGFWPFGNALCKT 199 (434)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcCcccHHHH
Confidence 344556677888899999999999999999999999999999998874 4466 556667789999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhcccccCCCCCCcceeeecc
Q psy16087 83 YIAMDVMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNNTPDRVPDLCLFYSS 162 (252)
Q Consensus 83 ~~~~~~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~C~~~~~ 162 (252)
..++..++..+|++++++||+|||+||++|++|+..++++++..+++++|+++++.++|..+............|.....
T Consensus 200 ~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~c~~~~~ 279 (434)
T 4ea3_A 200 VIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIP 279 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSSCCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecCceeEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999998877554444444566776432
Q ss_pred c--------hhhhhHHHHhhHHHHHHHHHHHHHHHHHHHh
Q psy16087 163 D--------FIIYSSLSSFYIPCIIMVFLYYNIFKALSKR 194 (252)
Q Consensus 163 ~--------~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~ 194 (252)
. +.....++.+++|+++++++|.+|++.+|++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~ 319 (434)
T 4ea3_A 280 TPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGV 319 (434)
T ss_dssp SSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTC
T ss_pred ChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 1 4555667788999999999999999998764
No 13
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.93 E-value=6.3e-27 Score=209.55 Aligned_cols=186 Identities=26% Similarity=0.491 Sum_probs=151.7
Q ss_pred hhHHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeee----------hhhh-HHHHhcCccccccccchHhhH
Q psy16087 17 FVCDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSV----------YLPF-VYLQVNGKWGLPDFVCDFYIA 85 (252)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l----------~~p~-~~~~~~~~~~~~~~~C~~~~~ 85 (252)
....+.+++.+++++|++||+++++++.+++++|+++|++++|+ .+|+ +.....+.|.+|+..|++..+
T Consensus 181 ~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 260 (514)
T 3sn6_R 181 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTS 260 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHH
Confidence 34557788889999999999999999999999999999999873 4566 566677889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhcc-cccCCCCCCccee------
Q psy16087 86 MDVMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLG-LNNTPDRVPDLCL------ 158 (252)
Q Consensus 86 ~~~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~-~~~~~~~~~~~C~------ 158 (252)
+..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++++.+. +..........|.
T Consensus 261 l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~~~~~ 340 (514)
T 3sn6_R 261 IDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCC 340 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeeccccc
Confidence 999999999999999999999999999999998999999999999999999999766543 3222221111222
Q ss_pred e--eccchhhhhHHHHhhHHHHHHHHHHHHHHHHHHHhHHhHHhcc
Q psy16087 159 F--YSSDFIIYSSLSSFYIPCIIMVFLYYNIFKALSKRAKKAKAAR 202 (252)
Q Consensus 159 ~--~~~~~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~~~~~~~~ 202 (252)
. ....|.+...++.+++|+++++++|.+|++.+|++.++.+...
T Consensus 341 ~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~ 386 (514)
T 3sn6_R 341 DFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSE 386 (514)
T ss_dssp CCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 1 1223666777888999999999999999999999877766543
No 14
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.93 E-value=1.2e-27 Score=211.81 Aligned_cols=178 Identities=34% Similarity=0.651 Sum_probs=152.0
Q ss_pred hHHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeee----------hhhh-HHHHhc-CccccccccchHhhH
Q psy16087 18 VCDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSV----------YLPF-VYLQVN-GKWGLPDFVCDFYIA 85 (252)
Q Consensus 18 ~~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l----------~~p~-~~~~~~-~~~~~~~~~C~~~~~ 85 (252)
..++.+++.+++++|++||+++++++.+++++|+++|+|++++ .+|+ +..... +.|.+|+..|++..+
T Consensus 38 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~ 117 (481)
T 3pbl_A 38 HAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVT 117 (481)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHHH
Confidence 4455677889999999999999999999999999999998874 3455 333333 679999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccccc---ccccccchhhhhHHHHHHHHHHhhhchhcccccCCCCCCcceeeecc
Q psy16087 86 MDVMCSTSSIFNLVAISIDRYIAVTQPIKY---AKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNNTPDRVPDLCLFYSS 162 (252)
Q Consensus 86 ~~~~~~~~s~~~l~~isidRy~aI~~Pl~~---~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~C~~~~~ 162 (252)
+..++..+|++++++||+|||+||++|++| ....+++++..+++++|++++++++|+++.+.... +...|.....
T Consensus 118 ~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~--~~~~C~~~~~ 195 (481)
T 3pbl_A 118 LDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTG--DPTVCSISNP 195 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCS--STTCCSCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecccC--CCCcccccCc
Confidence 999999999999999999999999999999 56788899999999999999999999988765533 3456888877
Q ss_pred chhhhhHHHHhhHHHHHHHHHHHHHHHHHHHhHHh
Q psy16087 163 DFIIYSSLSSFYIPCIIMVFLYYNIFKALSKRAKK 197 (252)
Q Consensus 163 ~~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~~~ 197 (252)
.+.....++.+++|+++++++|.+|++.+|+++++
T Consensus 196 ~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~ 230 (481)
T 3pbl_A 196 DFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRK 230 (481)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 88888889999999999999999999999987543
No 15
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.93 E-value=5.8e-26 Score=189.16 Aligned_cols=176 Identities=20% Similarity=0.277 Sum_probs=139.9
Q ss_pred hhHHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeeeh---------hhhHHHHhcCccccccccchHhhHHH
Q psy16087 17 FVCDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSVY---------LPFVYLQVNGKWGLPDFVCDFYIAMD 87 (252)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l~---------~p~~~~~~~~~~~~~~~~C~~~~~~~ 87 (252)
...++.+++++++++|++||++++.++.++|++|+++|++++|++ +|+.......+|.+|+..|+...++.
T Consensus 10 ~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~~p~~~~~~~~~~~~~~~~c~~~~~~~ 89 (296)
T 2lnl_A 10 NKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLK 89 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCSSHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHhhhHHHhhccCCCccchhHHHHHhhhh
Confidence 355677889999999999999999999999999999999998843 45533344567999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhcccccCCCCC-Ccceeee----c-
Q psy16087 88 VMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNNTPDRV-PDLCLFY----S- 161 (252)
Q Consensus 88 ~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~-~~~C~~~----~- 161 (252)
..+..+|.+++++||+|||+||++|++|+... ++++..+++++|+.+++.++|+.........+. ...|... .
T Consensus 90 ~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (296)
T 2lnl_A 90 EVNFYSGILLLACISVDRYLAIVHATRTLTQK-RHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTA 168 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCH-HHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCCSCCTT
T ss_pred hhhHHHHHHHHHHHHhhhhhhhhhccccchhh-hhhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeeeeccccch
Confidence 99999999999999999999999999987654 466777888999999999999887766533222 2222211 1
Q ss_pred ---cchhhhhHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy16087 162 ---SDFIIYSSLSSFYIPCIIMVFLYYNIFKALSK 193 (252)
Q Consensus 162 ---~~~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~ 193 (252)
..+......+.+++|+.++..+|.++.+++++
T Consensus 169 ~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~ 203 (296)
T 2lnl_A 169 KWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFK 203 (296)
T ss_dssp TTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11455556778899999999999988766544
No 16
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.92 E-value=1.7e-26 Score=204.43 Aligned_cols=181 Identities=23% Similarity=0.351 Sum_probs=148.1
Q ss_pred hHHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeeeh----------hhhHHHHhcCccccccccchHhhHHH
Q psy16087 18 VCDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSVY----------LPFVYLQVNGKWGLPDFVCDFYIAMD 87 (252)
Q Consensus 18 ~~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l~----------~p~~~~~~~~~~~~~~~~C~~~~~~~ 87 (252)
..++.+++.+++++|++||+++++++.+++++|+++|+|++|++ +|+... ....|.++...|++..++.
T Consensus 21 ~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~-~~~~~~~~~~~C~~~~~~~ 99 (488)
T 3eml_A 21 SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT-ISTGFCAACHGCLFIACFV 99 (488)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHH-HTTCCEECHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHH-HhccccccchHHHHHHHHH
Confidence 45677888899999999999999999999999999999998844 344222 2346888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhcccccCCC-----CCCcceeeecc
Q psy16087 88 VMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNNTPD-----RVPDLCLFYSS 162 (252)
Q Consensus 88 ~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~-----~~~~~C~~~~~ 162 (252)
.++..+|++++++||+|||++|++|++|+..++++++..+++++|++++++++|+++++..... .....|.....
T Consensus 100 ~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 179 (488)
T 3eml_A 100 LVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQV 179 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC-------CCSSCTTCE
T ss_pred HHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999887655222 12233443211
Q ss_pred -----------chhhhhHHHHhhHHHHHHHHHHHHHHHHHHHhHHhHH
Q psy16087 163 -----------DFIIYSSLSSFYIPCIIMVFLYYNIFKALSKRAKKAK 199 (252)
Q Consensus 163 -----------~~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~~~~~ 199 (252)
.+.....++.+++|+++++++|.+|++++|++.++.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~ 227 (488)
T 3eml_A 180 ACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFE 227 (488)
T ss_dssp ECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHH
T ss_pred eeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 1444456788899999999999999999998765543
No 17
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.92 E-value=9.8e-27 Score=197.46 Aligned_cols=177 Identities=18% Similarity=0.350 Sum_probs=147.3
Q ss_pred hHHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeeeh----------hhh-HHHHhcCccccccccchHhhHH
Q psy16087 18 VCDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSVY----------LPF-VYLQVNGKWGLPDFVCDFYIAM 86 (252)
Q Consensus 18 ~~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l~----------~p~-~~~~~~~~~~~~~~~C~~~~~~ 86 (252)
..++.+++.+++++|++||+++++++.+++++|+++|++++|++ +|. ......+.|.+|+..|++..++
T Consensus 38 ~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 117 (349)
T 1u19_A 38 FSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFF 117 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHHHHH
Confidence 44566778899999999999999999999999999999998843 444 4455667899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhccccc-CCCCCCcceeeecc---
Q psy16087 87 DVMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNN-TPDRVPDLCLFYSS--- 162 (252)
Q Consensus 87 ~~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~-~~~~~~~~C~~~~~--- 162 (252)
...+..+|++++++||+|||+||++|++|++ .+++++...++++|+++++.++|+.+++.. .++.....|..+..
T Consensus 118 ~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 196 (349)
T 1u19_A 118 ATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPH 196 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETTTTEEECCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCCceeecccccCcc
Confidence 9999999999999999999999999999876 788999999999999999999999887644 22334456765431
Q ss_pred ------chhhhhHHHHhhHHHHHHHHHHHHHHHHHHHhH
Q psy16087 163 ------DFIIYSSLSSFYIPCIIMVFLYYNIFKALSKRA 195 (252)
Q Consensus 163 ------~~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~ 195 (252)
.|.....++.+++|+++++++|.+|++++|+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~ 235 (349)
T 1u19_A 197 EETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA 235 (349)
T ss_dssp GGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCC
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 244555677788999999999999999987653
No 18
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.91 E-value=1.5e-26 Score=202.67 Aligned_cols=181 Identities=23% Similarity=0.354 Sum_probs=145.8
Q ss_pred hHHHHHHHHHHHHHHhhhhheeeeeeccccccccccceeeeeeh----------hhhHHHHhcCccccccccchHhhHHH
Q psy16087 18 VCDFYIAMDVMCSTSSIFNLVAISIDRGKLCFTKFSNVFLLSVY----------LPFVYLQVNGKWGLPDFVCDFYIAMD 87 (252)
Q Consensus 18 ~~~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~~~~~~~li~~l~----------~p~~~~~~~~~~~~~~~~C~~~~~~~ 87 (252)
..++.+++.+++++|++||+++++++.+++++|+++|++++|++ +|+... ....|.++...|++..++.
T Consensus 31 ~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~-~~~~~~~~~~~C~~~~~~~ 109 (447)
T 4eiy_A 31 SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT-ISTGFCAACHGCLFIACFV 109 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHH-HHTTCEEEHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccccCccHHHHHHHHH
Confidence 45677888899999999999999999999999999999998843 344222 3346778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhhhhHHHHHHHHHHhhhchhcccccCCCCC-----Ccceeee--
Q psy16087 88 VMCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTIVLVWAISVAIGSPIVLGLNNTPDRV-----PDLCLFY-- 160 (252)
Q Consensus 88 ~~~~~~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~-----~~~C~~~-- 160 (252)
.++..+|++++++||+|||+||++|++|+..++++++..+++++|++++++++|+.+++....... ...|...
T Consensus 110 ~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 189 (447)
T 4eiy_A 110 LVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQV 189 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHHTTCCTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCccccccccccccch
Confidence 999999999999999999999999999999999999999999999999999999988765533211 1123221
Q ss_pred -----cc----chhhhhHHHHhhHHHHHHHHHHHHHHHHHHHhHHhHH
Q psy16087 161 -----SS----DFIIYSSLSSFYIPCIIMVFLYYNIFKALSKRAKKAK 199 (252)
Q Consensus 161 -----~~----~~~~~~~~~~~~lp~~~i~~~y~~I~~~lr~~~~~~~ 199 (252)
.. .+.....++.+++|+++++++|.+|++.+|++.++.+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~ 237 (447)
T 4eiy_A 190 ACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLE 237 (447)
T ss_dssp ECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 11 1223335667889999999999999999999866554
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.82 E-value=1.3e-09 Score=59.02 Aligned_cols=31 Identities=52% Similarity=0.786 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHhhhhhcccccccccccch
Q psy16087 93 SSIFNLVAISIDRYIAVTQPIKYAKHKNNRR 123 (252)
Q Consensus 93 ~s~~~l~~isidRy~aI~~Pl~~~~~~t~~~ 123 (252)
+|++++++||+|||+||++|++|...+++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~~ 32 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPRR 32 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCCC
Confidence 6899999999999999999999988777653
No 20
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=93.00 E-value=0.0042 Score=38.43 Aligned_cols=30 Identities=7% Similarity=-0.258 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHhhhhheeeeeecccccc
Q psy16087 20 DFYIAMDVMCSTSSIFNLVAISIDRGKLCF 49 (252)
Q Consensus 20 ~~~~~~~~~~~~g~~gN~~vi~v~~~~~~~ 49 (252)
.+.++|++++++|++||+++++++.+++-.
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 566788899999999999999997766543
No 21
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=45.16 E-value=31 Score=18.20 Aligned_cols=23 Identities=22% Similarity=0.592 Sum_probs=11.9
Q ss_pred hHHHHHH-HHHHHHHHHHHHHhHH
Q psy16087 174 YIPCIIM-VFLYYNIFKALSKRAK 196 (252)
Q Consensus 174 ~lp~~~i-~~~y~~I~~~lr~~~~ 196 (252)
++|++++ ++.|..++|-=+++++
T Consensus 6 ~l~~v~~~~ifYFl~iRPQ~Kr~K 29 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMILRPQQKRTK 29 (37)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3454443 5666666655444433
No 22
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=41.51 E-value=1.2e+02 Score=24.27 Aligned_cols=34 Identities=21% Similarity=0.484 Sum_probs=22.1
Q ss_pred cCccCCchhhHHHHHHHHHHHHHHhhhhheeeee
Q psy16087 9 NGKWGLPDFVCDFYIAMDVMCSTSSIFNLVAISI 42 (252)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~g~~gN~~vi~v 42 (252)
.++|.+++..+.+...+........+.++..+.+
T Consensus 95 ~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isi 128 (364)
T 2ks9_A 95 HNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAF 128 (364)
T ss_dssp HTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccchHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999888887666555555555555554443
No 23
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=41.24 E-value=23 Score=18.79 Aligned_cols=21 Identities=5% Similarity=-0.211 Sum_probs=15.7
Q ss_pred hhhHHHHHHHHHHHHHHhhhh
Q psy16087 16 DFVCDFYIAMDVMCSTSSIFN 36 (252)
Q Consensus 16 ~~~~~~~~~~~~~~~~g~~gN 36 (252)
.......+++..++++|.+.|
T Consensus 6 i~Vy~vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 6 ITVYIVVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT
T ss_pred eeehhHHHHHHHHHHccccCC
Confidence 445566777778888999887
No 24
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=34.59 E-value=1.6e+02 Score=24.56 Aligned_cols=34 Identities=47% Similarity=0.943 Sum_probs=22.5
Q ss_pred cCccCCchhhHHHHHHHHHHHHHHhhhhheeeee
Q psy16087 9 NGKWGLPDFVCDFYIAMDVMCSTSSIFNLVAISI 42 (252)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~g~~gN~~vi~v 42 (252)
.++|.++...+.+...+..+...+.+.+++++.+
T Consensus 102 ~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~ 135 (481)
T 3pbl_A 102 GGVWNFSRICCDVFVTLDVMMCTASIWNLCAISI 135 (481)
T ss_dssp TSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccccCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3679999988887776665555555555555544
No 25
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=29.76 E-value=24 Score=29.85 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=24.2
Q ss_pred cCccCCchhhHHHHHHHHHHHHHHhhhhheeeee
Q psy16087 9 NGKWGLPDFVCDFYIAMDVMCSTSSIFNLVAISI 42 (252)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~g~~gN~~vi~v 42 (252)
.++|.+++..+.+...+..+...+-+.+++++.+
T Consensus 83 ~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~ 116 (484)
T 3vw7_A 83 GSDWQFGSELCRFVTAAFYCNMYASILLMTVISI 116 (484)
T ss_dssp TSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccchhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999988777666666666666555544
No 26
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=28.60 E-value=1.9e+02 Score=23.98 Aligned_cols=34 Identities=41% Similarity=0.801 Sum_probs=23.5
Q ss_pred cCccCCchhhHHHHHHHHHHHHHHhhhhheeeee
Q psy16087 9 NGKWGLPDFVCDFYIAMDVMCSTSSIFNLVAISI 42 (252)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~g~~gN~~vi~v 42 (252)
.++|.++...+.+...+..+.....+.+++.+.+
T Consensus 86 ~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isi 119 (467)
T 3uon_A 86 IGYWPLGPVVCDLWLALDYVVSNASVMNLLIISF 119 (467)
T ss_dssp SSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccCCcchHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999998887776666666655555555544
No 27
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=24.87 E-value=2.3e+02 Score=23.37 Aligned_cols=34 Identities=32% Similarity=0.544 Sum_probs=22.2
Q ss_pred cCccCCchhhHHHHHHHHHHHHHHhhhhheeeee
Q psy16087 9 NGKWGLPDFVCDFYIAMDVMCSTSSIFNLVAISI 42 (252)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~g~~gN~~vi~v 42 (252)
.++|.++...+.+...+........+.+++++.+
T Consensus 187 ~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isi 220 (434)
T 4ea3_A 187 LGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSV 220 (434)
T ss_dssp HTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678888888887766666555555555555433
No 28
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=23.27 E-value=2.3e+02 Score=23.27 Aligned_cols=34 Identities=38% Similarity=0.750 Sum_probs=23.1
Q ss_pred cCccCCchhhHHHHHHHHHHHHHHhhhhheeeee
Q psy16087 9 NGKWGLPDFVCDFYIAMDVMCSTSSIFNLVAISI 42 (252)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~g~~gN~~vi~v 42 (252)
.++|.++...+.+...+..+.....+.+++.+.+
T Consensus 71 ~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~ 104 (452)
T 3rze_A 71 MSKWSLGRPLCLFWLSMDYVASTASIFSVFILCI 104 (452)
T ss_dssp SSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccCCchhHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999988887776666665555555555543
No 29
>3arc_M Photosystem II reaction center protein M; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_M* 2axt_M* 3bz1_M* 3bz2_M* 3kzi_M* 3prq_M* 3prr_M* 3a0b_M* 3a0h_M*
Probab=21.08 E-value=1e+02 Score=16.18 Aligned_cols=21 Identities=14% Similarity=0.453 Sum_probs=15.5
Q ss_pred hhHHHHhhHHHHHHHHHHHHH
Q psy16087 167 YSSLSSFYIPCIIMVFLYYNI 187 (252)
Q Consensus 167 ~~~~~~~~lp~~~i~~~y~~I 187 (252)
.-..++.++|..+.++.|++.
T Consensus 9 iAt~Lfi~iPt~FLlilYvqT 29 (36)
T 3arc_M 9 IATALFVLVPSVFLIILYVQT 29 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhee
Confidence 334556678999999988864
No 30
>2jx4_A Vasopressin V2 receptor; protein, G-protein coupled receptor, glycoprotein, lipoprotein, membrane, palmitate, phosphorylation, receptor transducer; HET: DGN NLE CCS; NMR {Synthetic}
Probab=20.73 E-value=46 Score=19.01 Aligned_cols=14 Identities=14% Similarity=0.154 Sum_probs=10.0
Q ss_pred HHHHHHHHHHhHHh
Q psy16087 184 YYNIFKALSKRAKK 197 (252)
Q Consensus 184 y~~I~~~lr~~~~~ 197 (252)
|..|++++|++.+.
T Consensus 2 y~~I~~~Iw~~~~~ 15 (52)
T 2jx4_A 2 QVLIFREIHASLVP 15 (52)
T ss_dssp CHHHHHHHHHHHTH
T ss_pred eEEEEeHHHhhCCc
Confidence 57788888877543
No 31
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=20.02 E-value=3.4e+02 Score=22.40 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=18.6
Q ss_pred ccCCchhhHHHHHHHHHHHHHHhhhhheeeee
Q psy16087 11 KWGLPDFVCDFYIAMDVMCSTSSIFNLVAISI 42 (252)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~g~~gN~~vi~v 42 (252)
.|.++...+.+...+..+.....+.+++++.+
T Consensus 84 ~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~ 115 (488)
T 3eml_A 84 GFCAACHGCLFIACFVLVLTQSSIFSLLAIAI 115 (488)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677777776666555555555555444433
Done!