Query psy16095
Match_columns 241
No_of_seqs 294 out of 2037
Neff 5.4
Searched_HMMs 29240
Date Fri Aug 16 20:45:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16095.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16095hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eno_A Putative O-sialoglycopr 100.0 5.7E-50 2E-54 368.3 18.5 181 1-240 5-186 (334)
2 3en9_A Glycoprotease, O-sialog 100.0 6.6E-49 2.3E-53 378.6 20.9 180 2-241 6-186 (540)
3 2ivn_A O-sialoglycoprotein end 100.0 2.4E-44 8.2E-49 329.1 21.4 179 2-240 1-180 (330)
4 3r6m_A YEAZ, resuscitation pro 100.0 6E-29 2.1E-33 216.8 12.3 148 1-218 1-153 (213)
5 2a6a_A Hypothetical protein TM 100.0 3.7E-28 1.3E-32 212.3 15.5 120 98-221 39-161 (218)
6 2gel_A Putative GRAM negative 99.9 7.7E-28 2.6E-32 211.0 12.0 97 98-195 28-124 (231)
7 3ven_A O-carbamoyltransferase 99.9 2.5E-24 8.7E-29 210.8 1.7 127 111-240 55-199 (576)
8 4ehu_A Activator of 2-hydroxyi 99.8 5E-19 1.7E-23 155.3 12.6 130 77-240 22-155 (276)
9 4g9i_A Hydrogenase maturation 99.0 4.5E-10 1.5E-14 113.4 7.7 125 106-240 435-575 (772)
10 3vth_A Hydrogenase maturation 98.6 2.8E-07 9.7E-12 93.0 13.2 123 106-240 437-629 (761)
11 1hux_A Activator of (R)-2-hydr 98.3 9E-06 3.1E-10 71.7 14.4 150 2-240 3-154 (270)
12 3ttc_A HYPF, transcriptional r 98.3 3.6E-06 1.2E-10 83.7 11.9 122 107-240 341-538 (657)
13 2qm1_A Glucokinase; alpha-beta 95.1 0.097 3.3E-06 45.7 9.2 107 3-172 7-125 (326)
14 2e2o_A Hexokinase; acetate and 94.3 0.75 2.6E-05 39.7 12.8 103 1-173 1-104 (299)
15 2ch5_A NAGK protein; transfera 93.3 1.8 6.3E-05 37.9 13.6 66 104-171 48-117 (347)
16 1zc6_A Probable N-acetylglucos 92.7 1.7 5.7E-05 37.8 12.4 62 104-172 52-118 (305)
17 2ews_A Pantothenate kinase; PA 92.6 1.7 5.8E-05 38.8 12.4 89 123-225 61-154 (287)
18 1hjr_A Holliday junction resol 91.8 0.39 1.3E-05 39.4 6.7 21 2-22 1-21 (158)
19 2p3r_A Glycerol kinase; glycer 90.9 0.99 3.4E-05 42.7 9.4 77 1-133 2-80 (510)
20 4e1j_A Glycerol kinase; struct 89.9 1.4 4.6E-05 41.9 9.5 30 103-132 73-102 (520)
21 2dpn_A Glycerol kinase; thermu 89.7 1.5 5.1E-05 41.1 9.5 77 1-133 1-79 (495)
22 3hz6_A Xylulokinase; xylulose, 89.4 1.5 5.3E-05 41.4 9.3 79 2-136 5-85 (511)
23 3ifr_A Carbohydrate kinase, FG 88.9 1.5 5.1E-05 41.5 8.9 76 2-133 7-84 (508)
24 2gup_A ROK family protein; sug 88.8 1.4 4.8E-05 37.8 7.9 61 106-173 40-112 (292)
25 3djc_A Type III pantothenate k 88.5 12 0.00041 32.7 16.7 50 108-163 40-90 (266)
26 3g25_A Glycerol kinase; IDP007 88.5 2 6.9E-05 40.3 9.5 75 3-133 7-83 (501)
27 3l0q_A Xylulose kinase; xlylul 88.2 1 3.6E-05 43.0 7.4 78 1-134 4-83 (554)
28 4ep4_A Crossover junction endo 88.2 1.5 5.1E-05 36.3 7.3 21 2-22 1-21 (166)
29 1z6r_A MLC protein; transcript 87.6 1.6 5.3E-05 39.6 7.8 69 104-173 124-204 (406)
30 3h3n_X Glycerol kinase; ATP-bi 87.5 2.3 7.7E-05 40.1 9.1 76 2-133 5-82 (506)
31 3ezw_A Glycerol kinase; glycer 87.5 2.1 7.2E-05 40.5 8.9 32 105-136 53-85 (526)
32 2aa4_A Mannac kinase, putative 87.4 3.4 0.00012 35.3 9.5 30 144-173 85-114 (289)
33 2zf5_O Glycerol kinase; hypert 86.6 2.7 9.2E-05 39.4 9.1 76 1-132 1-79 (497)
34 1z05_A Transcriptional regulat 85.5 3.1 0.00011 38.0 8.8 69 104-172 147-225 (429)
35 1saz_A Probable butyrate kinas 84.9 9 0.00031 34.7 11.5 57 109-166 51-131 (381)
36 2w40_A Glycerol kinase, putati 84.6 3.1 0.00011 39.0 8.5 77 1-133 3-83 (503)
37 3jvp_A Ribulokinase; PSI-II, N 83.9 3.4 0.00012 39.6 8.5 32 105-136 66-98 (572)
38 3ll3_A Gluconate kinase; xylul 83.5 4.8 0.00016 37.9 9.3 77 1-136 3-82 (504)
39 2hoe_A N-acetylglucosamine kin 83.4 3.8 0.00013 36.9 8.2 69 104-172 127-205 (380)
40 4db3_A Glcnac kinase, N-acetyl 82.7 7.9 0.00027 34.0 9.9 65 104-173 63-138 (327)
41 4bc3_A Xylulose kinase; transf 81.9 4.1 0.00014 38.7 8.2 22 1-22 9-30 (538)
42 3vgl_A Glucokinase; ROK family 81.7 3.9 0.00013 35.8 7.5 61 105-172 41-113 (321)
43 2w6k_A COBE; biosynthetic prot 81.6 3.8 0.00013 32.9 6.7 51 106-163 25-75 (145)
44 2yhw_A Bifunctional UDP-N-acet 79.5 6.1 0.00021 34.7 8.0 68 105-173 69-149 (343)
45 2d4w_A Glycerol kinase; alpha 78.6 9.2 0.00031 35.8 9.3 74 3-132 3-78 (504)
46 3il3_A 3-oxoacyl-[acyl-carrier 78.6 3.8 0.00013 36.3 6.3 46 104-158 222-267 (323)
47 3h78_A PQS biosynthetic enzyme 78.5 3.1 0.00011 37.5 5.8 46 104-158 252-297 (359)
48 4e1l_A Acetoacetyl-COA thiolas 78.4 2.6 8.9E-05 38.3 5.3 56 105-164 30-89 (395)
49 4dfe_A 3-oxoacyl-[acyl-carrier 77.3 3.7 0.00013 36.2 5.8 47 103-158 231-277 (333)
50 4dd5_A Acetyl-COA acetyltransf 77.3 3 0.0001 38.0 5.4 56 105-164 32-91 (396)
51 4ewp_A 3-oxoacyl-[acyl-carrier 77.2 2.2 7.6E-05 37.7 4.4 46 104-158 247-292 (350)
52 3gwa_A 3-oxoacyl-(acyl-carrier 77.1 2.6 9E-05 38.0 4.9 45 105-158 265-309 (365)
53 3lma_A Stage V sporulation pro 77.0 6.1 0.00021 36.3 7.3 51 105-163 56-107 (347)
54 1vhx_A Putative holliday junct 77.0 9.2 0.00031 30.6 7.6 47 109-163 44-97 (150)
55 3vov_A Glucokinase, hexokinase 76.8 12 0.00041 32.4 9.0 66 104-173 39-116 (302)
56 4efi_A 3-oxoacyl-(acyl-carrier 76.4 2.9 9.8E-05 37.5 4.9 45 105-158 243-287 (354)
57 3ss6_A Acetyl-COA acetyltransf 75.0 2.9 0.0001 38.0 4.6 56 104-163 29-88 (394)
58 3s21_A 3-oxoacyl-[ACP] synthas 74.1 4.3 0.00015 36.1 5.4 46 104-158 244-289 (345)
59 2ap1_A Putative regulator prot 71.6 43 0.0015 28.9 11.2 64 105-173 64-138 (327)
60 3h78_A PQS biosynthetic enzyme 71.3 6.2 0.00021 35.5 5.8 29 105-133 75-103 (359)
61 4htl_A Beta-glucoside kinase; 71.2 22 0.00075 30.6 9.2 60 108-172 43-114 (297)
62 1mzj_A Beta-ketoacylsynthase I 70.6 7.3 0.00025 34.2 6.1 42 105-151 230-271 (339)
63 3r8e_A Hypothetical sugar kina 70.3 12 0.00041 32.6 7.4 62 105-171 60-134 (321)
64 2x3e_A 3-oxoacyl-[acyl-carrier 70.1 6.6 0.00022 34.4 5.6 43 105-152 223-265 (331)
65 3led_A 3-oxoacyl-acyl carrier 69.5 7.6 0.00026 35.5 6.1 43 104-151 289-331 (392)
66 1zbs_A Hypothetical protein PG 69.2 53 0.0018 28.0 11.3 60 107-172 44-105 (291)
67 1zow_A 3-oxoacyl-[acyl-carrier 69.0 8.8 0.0003 33.0 6.1 43 105-152 211-253 (313)
68 4dfe_A 3-oxoacyl-[acyl-carrier 68.8 4.7 0.00016 35.6 4.4 30 104-133 65-94 (333)
69 3goa_A 3-ketoacyl-COA thiolase 68.6 6.3 0.00022 35.8 5.3 56 105-164 28-89 (387)
70 1u6e_A 3-oxoacyl-[acyl-carrier 67.7 6.7 0.00023 34.1 5.1 31 104-134 61-91 (335)
71 1u6e_A 3-oxoacyl-[acyl-carrier 67.5 7 0.00024 34.0 5.2 43 105-152 231-273 (335)
72 1hnj_A Beta-ketoacyl-acyl carr 67.4 6.9 0.00024 33.8 5.1 58 105-171 217-277 (317)
73 3htv_A D-allose kinase, alloki 66.7 47 0.0016 28.8 10.5 62 105-169 47-121 (310)
74 1ted_A PKS18; thiolase fold, s 66.5 7.2 0.00025 35.2 5.2 43 104-151 285-327 (393)
75 3i8b_A Xylulose kinase; strain 66.3 14 0.00047 35.0 7.3 27 106-133 46-72 (515)
76 3gwa_A 3-oxoacyl-(acyl-carrier 65.8 6.2 0.00021 35.5 4.6 32 105-136 81-113 (365)
77 1u0m_A Putative polyketide syn 65.5 9.4 0.00032 34.3 5.8 45 105-159 252-296 (382)
78 3il3_A 3-oxoacyl-[acyl-carrier 64.1 6.9 0.00023 34.6 4.5 29 105-133 59-87 (323)
79 4efi_A 3-oxoacyl-(acyl-carrier 63.8 6.6 0.00023 35.1 4.4 29 105-133 67-95 (354)
80 2itm_A Xylulose kinase, xylulo 62.6 41 0.0014 31.1 9.7 29 102-132 46-74 (484)
81 2ebd_A 3-oxoacyl-[acyl-carrier 61.6 9 0.00031 32.8 4.7 40 105-149 209-248 (309)
82 3s21_A 3-oxoacyl-[ACP] synthas 61.1 8.2 0.00028 34.2 4.5 32 105-136 69-101 (345)
83 1ub7_A 3-oxoacyl-[acyl-carrier 60.8 9.1 0.00031 33.1 4.6 44 106-158 220-263 (322)
84 1ub7_A 3-oxoacyl-[acyl-carrier 60.6 8.6 0.0003 33.3 4.4 31 104-134 50-80 (322)
85 3euo_A Type III pentaketide sy 60.2 13 0.00043 33.7 5.6 29 106-134 83-111 (379)
86 3h6e_A Carbohydrate kinase, FG 60.0 19 0.00064 33.9 6.9 20 3-22 7-26 (482)
87 1woq_A Inorganic polyphosphate 59.1 79 0.0027 26.4 10.5 65 105-171 55-130 (267)
88 3s3l_A CERJ; acyltransferase, 59.0 17 0.00058 32.5 6.2 29 105-133 55-83 (357)
89 3mcp_A Glucokinase; structural 58.7 21 0.00071 32.4 6.8 48 124-171 65-124 (366)
90 1zow_A 3-oxoacyl-[acyl-carrier 58.6 13 0.00044 31.9 5.2 30 105-134 52-81 (313)
91 2ebd_A 3-oxoacyl-[acyl-carrier 58.3 13 0.00043 31.9 5.0 31 104-134 50-80 (309)
92 3oit_A OS07G0271500 protein; t 58.0 12 0.00043 33.9 5.2 29 105-133 97-125 (387)
93 3il6_A 3-oxoacyl-[acyl-carrier 57.3 11 0.00037 33.2 4.5 32 105-136 53-85 (321)
94 3awk_A Chalcone synthase-like 57.1 23 0.00079 32.1 6.9 29 105-133 116-144 (402)
95 3tsy_A Fusion protein 4-coumar 55.8 13 0.00045 37.3 5.4 46 107-157 692-737 (979)
96 2iik_A 3-ketoacyl-COA thiolase 55.4 13 0.00045 34.1 4.9 56 105-164 56-115 (418)
97 2h84_A Steely1; thiolase-fold, 55.4 22 0.00076 31.5 6.3 30 104-133 95-124 (374)
98 3ov2_A Curcumin synthase; type 55.0 15 0.0005 33.5 5.1 29 105-133 103-131 (393)
99 2uyt_A Rhamnulokinase; rhamnos 54.8 10 0.00035 35.2 4.1 22 1-22 3-24 (489)
100 2h84_A Steely1; thiolase-fold, 54.7 13 0.00044 33.0 4.7 45 105-159 266-316 (374)
101 1hnj_A Beta-ketoacyl-acyl carr 54.0 18 0.0006 31.2 5.3 30 105-134 52-81 (317)
102 3s3l_A CERJ; acyltransferase, 53.5 9.3 0.00032 34.3 3.5 29 103-131 235-263 (357)
103 2wu9_A 3-ketoacyl-COA thiolase 53.2 32 0.0011 31.9 7.2 56 105-163 56-115 (442)
104 3e1h_A PKSIIINC, putative unch 53.0 22 0.00074 33.5 6.1 29 106-134 112-140 (465)
105 1wl4_A Acetyl-coenzyme A acety 52.6 16 0.00055 33.1 5.0 56 105-164 31-90 (397)
106 1ulq_A Putative acetyl-COA ace 52.5 16 0.00053 33.2 4.9 55 106-163 28-86 (401)
107 3by5_A Cobalamin biosynthesis 52.5 28 0.00094 28.3 5.9 48 106-163 24-71 (155)
108 3svk_A Acetyl-COA acetyltransf 51.9 11 0.00039 34.4 3.9 55 105-163 33-93 (407)
109 2ib8_A Acetyl-COA acetyltransf 51.7 17 0.00058 32.8 5.0 56 105-164 33-92 (395)
110 3kzu_A 3-oxoacyl-(acyl-carrier 51.6 14 0.00049 33.8 4.5 44 108-152 295-338 (428)
111 1mzj_A Beta-ketoacylsynthase I 51.5 18 0.00063 31.5 5.1 31 104-134 60-90 (339)
112 3eeq_A Putative cobalamin bios 51.1 16 0.00055 33.2 4.7 47 105-163 222-268 (336)
113 3led_A 3-oxoacyl-acyl carrier 50.8 13 0.00046 33.9 4.2 32 105-136 118-150 (392)
114 3a5r_A Benzalacetone synthase; 50.7 21 0.00072 32.1 5.4 29 105-133 99-127 (387)
115 1e5m_A KAS II, beta ketoacyl a 49.3 13 0.00045 33.8 3.8 25 107-131 282-306 (416)
116 1i88_A CHS2, chalcone synthase 49.3 29 0.00097 31.2 6.1 29 105-133 103-131 (389)
117 1afw_A 3-ketoacetyl-COA thiola 49.0 23 0.00078 32.1 5.4 56 105-164 36-99 (393)
118 4ewp_A 3-oxoacyl-[acyl-carrier 48.2 16 0.00053 32.2 4.1 27 109-135 67-94 (350)
119 1xpm_A 3-hydroxy-3-methylgluta 48.0 19 0.00063 32.7 4.6 30 103-132 204-233 (396)
120 1tqy_B Actinorhodin polyketide 47.0 17 0.00057 33.0 4.2 24 108-131 281-304 (415)
121 3epq_A Putative fructokinase; 46.9 60 0.0021 28.1 7.7 28 144-171 86-113 (302)
122 1ted_A PKS18; thiolase fold, s 46.9 25 0.00086 31.6 5.3 29 105-133 114-142 (393)
123 1u0m_A Putative polyketide syn 45.7 24 0.00082 31.6 5.0 30 105-134 85-114 (382)
124 2p0u_A Stilbenecarboxylate syn 45.5 27 0.00092 31.9 5.3 29 105-133 121-149 (413)
125 3v7i_A Putative polyketide syn 45.2 18 0.00062 33.4 4.1 26 108-133 141-166 (413)
126 2vu1_A Acetyl-COA acetyltransf 45.1 20 0.0007 32.2 4.4 55 105-163 28-86 (392)
127 3tsy_A Fusion protein 4-coumar 45.0 27 0.00092 35.0 5.6 44 104-152 862-905 (979)
128 1xes_A Dihydropinosylvin synth 44.6 30 0.001 31.6 5.5 29 105-133 126-154 (413)
129 3q93_A 7,8-dihydro-8-oxoguanin 44.3 9.1 0.00031 30.3 1.7 74 53-132 12-90 (176)
130 2f82_A HMG-COA synthase; HMGS1 42.5 25 0.00086 32.5 4.7 28 106-133 54-81 (450)
131 1ee0_A 2-pyrone synthase; poly 42.4 35 0.0012 30.9 5.5 29 105-133 108-136 (402)
132 1wdk_C 3-ketoacyl-COA thiolase 41.4 21 0.00073 32.1 3.9 56 105-163 31-91 (390)
133 3grn_A MUTT related protein; s 41.0 32 0.0011 25.9 4.4 54 73-132 16-76 (153)
134 1iv0_A Hypothetical protein; r 39.5 1.1E+02 0.0038 22.5 7.1 21 2-22 1-21 (98)
135 3lma_A Stage V sporulation pro 39.5 63 0.0022 29.5 6.8 62 92-159 193-254 (347)
136 2wge_A 3-oxoacyl-[acyl-carrier 37.3 19 0.00065 32.9 2.9 30 107-137 286-315 (416)
137 2h3g_X Biosynthetic protein; p 37.0 2E+02 0.0069 24.7 15.6 53 106-163 37-89 (268)
138 2d3m_A Pentaketide chromone sy 36.9 39 0.0013 30.5 5.0 29 105-133 116-144 (406)
139 1zxo_A Conserved hypothetical 36.9 52 0.0018 28.0 5.6 46 124-172 56-103 (291)
140 3shd_A Phosphatase NUDJ; nudix 36.4 36 0.0012 25.4 4.0 54 73-132 12-69 (153)
141 3sqz_A Putative hydroxymethylg 36.3 26 0.0009 32.5 3.7 32 102-133 237-268 (425)
142 2gp6_A 3-oxoacyl-[acyl-carrier 35.7 23 0.00079 32.6 3.2 28 107-135 303-330 (434)
143 3v4n_A HMG-COA synthase; hydro 35.3 28 0.00097 31.6 3.8 31 103-133 209-239 (388)
144 4gni_A Putative heat shock pro 34.8 34 0.0012 30.5 4.1 54 99-158 318-371 (409)
145 1ulq_A Putative acetyl-COA ace 34.0 20 0.00067 32.5 2.4 24 109-132 299-322 (401)
146 4ewg_A Beta-ketoacyl synthase; 33.9 21 0.00072 32.4 2.6 27 105-131 278-304 (412)
147 3eds_A MUTT/nudix family prote 33.4 22 0.00075 27.0 2.3 56 73-134 29-85 (153)
148 2d3m_A Pentaketide chromone sy 33.4 51 0.0017 29.8 5.1 45 104-158 288-336 (406)
149 2yyh_A MUTT domain, 8-OXO-DGTP 33.1 31 0.0011 25.4 3.1 55 75-135 21-80 (139)
150 3e1h_A PKSIIINC, putative unch 32.9 46 0.0016 31.2 4.8 45 105-159 292-343 (465)
151 3o04_A LMO2201 protein, beta-k 32.2 23 0.0008 32.0 2.6 29 107-136 278-306 (413)
152 2p8u_A Hydroxymethylglutaryl-C 32.0 25 0.00086 33.0 2.9 30 105-134 74-103 (478)
153 1j3n_A 3-oxoacyl-(acyl-carrier 31.8 24 0.00082 31.8 2.6 29 107-136 276-304 (408)
154 1afw_A 3-ketoacetyl-COA thiola 31.7 19 0.00066 32.6 2.0 24 109-132 296-319 (393)
155 2vu1_A Acetyl-COA acetyltransf 31.3 20 0.00068 32.3 2.0 24 109-132 293-316 (392)
156 4ddo_A 3-oxoacyl-[acyl-carrier 31.2 25 0.00084 32.5 2.6 26 107-132 309-334 (451)
157 2f82_A HMG-COA synthase; HMGS1 31.1 78 0.0027 29.2 6.1 44 104-152 212-261 (450)
158 2gqd_A 3-oxoacyl-[acyl-carrier 31.0 25 0.00085 32.3 2.6 29 107-136 302-330 (437)
159 4e1l_A Acetoacetyl-COA thiolas 31.0 24 0.00081 31.8 2.4 23 109-131 297-319 (395)
160 1sjy_A MUTT/nudix family prote 30.5 34 0.0012 25.6 3.0 54 73-132 21-83 (159)
161 3euo_A Type III pentaketide sy 30.4 56 0.0019 29.4 4.8 45 105-159 263-314 (379)
162 1wdk_C 3-ketoacyl-COA thiolase 30.4 21 0.00071 32.2 1.9 24 109-132 288-311 (390)
163 2iwz_A 3-oxoacyl-[acyl-carrier 30.3 26 0.00089 32.2 2.6 29 107-136 302-330 (438)
164 1ox0_A Beta ketoacyl-acyl carr 30.2 23 0.00078 32.4 2.2 60 107-170 297-358 (430)
165 1tqy_A Beta-ketoacyl synthase/ 30.2 26 0.0009 31.8 2.6 25 107-131 284-308 (424)
166 2ix4_A 3-oxoacyl-[acyl-carrier 30.2 26 0.0009 32.0 2.6 30 106-136 294-323 (431)
167 3qbx_A Anhydro-N-acetylmuramic 30.2 47 0.0016 30.7 4.3 57 103-161 65-126 (371)
168 3hhj_A Mutator MUTT protein; n 30.1 50 0.0017 24.9 3.9 53 72-130 36-94 (158)
169 1wl4_A Acetyl-coenzyme A acety 29.9 21 0.00073 32.2 1.9 24 109-132 298-321 (397)
170 3ho9_A 3-oxoacyl-[acyl-carrier 29.4 28 0.00095 31.8 2.6 63 108-171 294-358 (427)
171 1i88_A CHS2, chalcone synthase 29.3 82 0.0028 28.1 5.7 46 104-159 275-321 (389)
172 2ib8_A Acetyl-COA acetyltransf 28.7 20 0.00068 32.3 1.5 23 109-131 298-320 (395)
173 1e5m_A KAS II, beta ketoacyl a 28.5 1.3E+02 0.0044 27.1 6.9 29 106-134 79-111 (416)
174 3ss6_A Acetyl-COA acetyltransf 28.3 25 0.00086 31.7 2.1 23 109-131 295-317 (394)
175 2wu9_A 3-ketoacyl-COA thiolase 28.3 27 0.00093 32.4 2.4 23 110-132 319-341 (442)
176 3i7u_A AP4A hydrolase; nudix p 28.3 31 0.0011 25.9 2.4 36 90-131 29-64 (134)
177 3svk_A Acetyl-COA acetyltransf 28.1 24 0.00082 32.2 2.0 23 110-132 309-331 (407)
178 2gqd_A 3-oxoacyl-[acyl-carrier 27.8 1.4E+02 0.0049 27.1 7.2 30 105-134 99-132 (437)
179 3goa_A 3-ketoacyl-COA thiolase 27.7 26 0.0009 31.6 2.1 24 109-132 285-308 (387)
180 3a5r_A Benzalacetone synthase; 27.4 78 0.0027 28.2 5.2 45 104-158 271-316 (387)
181 1dkg_D Molecular chaperone DNA 27.4 63 0.0022 28.3 4.6 53 101-159 309-361 (383)
182 2v7y_A Chaperone protein DNAK; 27.2 3.7E+02 0.013 24.7 14.0 29 1-29 1-29 (509)
183 3gg6_A Nudix motif 18, nucleos 27.0 29 0.001 26.1 2.0 56 72-133 27-87 (156)
184 1sz2_A Glucokinase, glucose ki 27.0 3E+02 0.01 23.6 10.0 60 108-173 52-120 (332)
185 3fst_A 5,10-methylenetetrahydr 26.8 1.8E+02 0.0063 25.6 7.5 49 106-161 39-87 (304)
186 3h1q_A Ethanolamine utilizatio 26.7 2.6E+02 0.0089 22.8 16.7 108 108-226 77-185 (272)
187 2p0u_A Stilbenecarboxylate syn 26.7 84 0.0029 28.5 5.4 46 104-159 293-339 (413)
188 2iik_A 3-ketoacyl-COA thiolase 26.5 23 0.00077 32.5 1.5 23 110-132 317-339 (418)
189 1ee0_A 2-pyrone synthase; poly 26.3 86 0.0029 28.2 5.3 46 103-158 279-325 (402)
190 2fkb_A Putative nudix hydrolas 26.2 84 0.0029 24.1 4.6 52 73-130 45-104 (180)
191 2v4w_A Hydroxymethylglutaryl-C 26.2 35 0.0012 32.3 2.7 29 105-133 55-83 (460)
192 1xes_A Dihydropinosylvin synth 26.1 84 0.0029 28.5 5.3 45 104-158 298-343 (413)
193 4dd5_A Acetyl-COA acetyltransf 25.9 31 0.0011 31.1 2.3 24 108-131 297-320 (396)
194 3exq_A Nudix family hydrolase; 25.5 90 0.0031 23.7 4.7 51 77-133 23-78 (161)
195 3oga_A Nucleoside triphosphata 25.2 56 0.0019 24.8 3.4 53 72-130 34-93 (165)
196 2wya_A Hydroxymethylglutaryl-C 25.2 34 0.0012 31.7 2.4 25 109-133 59-83 (460)
197 3cqy_A Anhydro-N-acetylmuramic 24.2 52 0.0018 30.4 3.4 57 103-161 69-132 (370)
198 3sy1_A UPF0001 protein YGGS; e 24.1 1.2E+02 0.0042 25.7 5.6 55 103-166 7-61 (245)
199 1ox0_A Beta ketoacyl-acyl carr 24.0 2.1E+02 0.0072 25.8 7.6 30 105-134 94-127 (430)
200 3r03_A Nudix hydrolase; struct 23.7 63 0.0022 23.6 3.3 53 73-131 16-74 (144)
201 3j21_S 50S ribosomal protein L 23.2 40 0.0014 27.4 2.2 86 45-135 33-123 (155)
202 2v4w_A Hydroxymethylglutaryl-C 23.2 1.5E+02 0.0051 27.8 6.5 49 101-154 211-270 (460)
203 4a17_Q RPL17, 60S ribosomal pr 23.0 64 0.0022 27.0 3.5 22 44-65 31-52 (183)
204 4gud_A Imidazole glycerol phos 23.0 91 0.0031 25.0 4.4 37 125-163 40-79 (211)
205 3qfu_A 78 kDa glucose-regulate 23.0 54 0.0018 28.7 3.2 54 100-159 318-372 (394)
206 1rya_A GDP-mannose mannosyl hy 22.4 70 0.0024 23.8 3.4 53 73-131 26-85 (160)
207 1xho_A Chorismate mutase; sout 22.3 1.4E+02 0.0046 24.3 5.1 54 105-164 50-106 (148)
208 3awk_A Chalcone synthase-like 22.0 90 0.0031 28.1 4.6 45 104-158 288-333 (402)
209 1hjs_A Beta-1,4-galactanase; 4 21.8 2.6E+02 0.0089 24.5 7.5 53 111-164 191-246 (332)
210 2lai_A Avirulence protein ATR1 21.7 10 0.00035 28.4 -1.5 21 216-239 56-76 (101)
211 3i9x_A MUTT/nudix family prote 21.6 79 0.0027 24.8 3.7 42 89-136 70-111 (187)
212 3i33_A Heat shock-related 70 k 21.5 59 0.002 28.7 3.2 54 100-159 326-380 (404)
213 1iv3_A 2-C-methyl-D-erythritol 21.3 1.2E+02 0.0041 24.7 4.7 56 104-162 72-127 (152)
214 3v4d_A Aminoacrylate peracid r 21.3 1.2E+02 0.004 23.2 4.5 42 90-131 43-84 (134)
215 2yvp_A NDX2, MUTT/nudix family 21.2 48 0.0016 25.8 2.3 53 72-130 48-106 (182)
216 3r79_A Uncharacterized protein 21.2 1.5E+02 0.0052 25.3 5.6 54 104-166 9-62 (244)
217 3mqd_A Beta-ketoacyl synthase; 21.0 1.1E+02 0.0037 27.8 5.0 30 105-134 93-126 (428)
218 1vcd_A NDX1; nudix protein, di 20.4 51 0.0017 23.5 2.1 53 73-131 10-63 (126)
219 4dyw_A MUTT/nudix family prote 20.2 64 0.0022 24.5 2.8 51 76-132 39-94 (157)
220 2kdv_A RNA pyrophosphohydrolas 20.1 72 0.0025 24.6 3.1 53 73-131 16-70 (164)
No 1
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=100.00 E-value=5.7e-50 Score=368.28 Aligned_cols=181 Identities=46% Similarity=0.780 Sum_probs=170.2
Q ss_pred CeEEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEE
Q psy16095 1 MVIAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTIL 80 (241)
Q Consensus 1 ~~~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 80 (241)
+|++|||||||+++|+||++++ +|+
T Consensus 5 ~M~iLgIdts~~~~svAl~~~~-------------------------------------------------------~i~ 29 (334)
T 3eno_A 5 PMIVLGLEGTAHTISCGIIDES-------------------------------------------------------RIL 29 (334)
T ss_dssp CCEEEEEECSSSEEEEEEEESS-------------------------------------------------------CCC
T ss_pred CceEEEEECCCcCeEEEEEECC-------------------------------------------------------EEE
Confidence 3899999999999999999863 367
Q ss_pred eeeeeecccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeE
Q psy16095 81 SNCRRTYVTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIV 160 (241)
Q Consensus 81 ~~~~~s~~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli 160 (241)
++...++ +.+||||+||.++|+|+++++++|++||+++|++++|||+|||+.|||+|||||||+++||+|+..+++|++
T Consensus 30 ~~~~~~~-~~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~Iav~~gPG~~t~lrvg~~~ak~La~~~~~Pl~ 108 (334)
T 3eno_A 30 AMESSMY-RPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGFSMGPGLAPSLRVTATAARTISVLTGKPII 108 (334)
T ss_dssp EEEEEEC-CCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSSCHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred EEEEEee-ccccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCcchHHHHHHHHHHHhhccCCCeE
Confidence 7665554 468899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccchhhhhhcccccCCCCcEEEEEeCCceEEEEEeCCcEEEEeeeccChhhhHHHHHHHHhCCCCCCCCc-HHHHhhh
Q psy16095 161 GVNHCIGHIEMGRNVTKCENPTVLYVSGGNTQVIAYSRQRYRIFGETIDIAVGNCLDRFARVLKLSNDPSPG-YNIEQMA 239 (241)
Q Consensus 161 ~V~HleaHa~sa~~~~~~~~Pl~L~VSGGhT~l~~~~~~~~~ilg~t~DdalGe~~Dkvar~LGl~~~p~PG-p~iE~lA 239 (241)
+||||++|++++++.+++++|++|+||||||+++.+++++|+++|+|+|+|+|++|||+|++|||+ ||| |.||+||
T Consensus 109 ~v~hl~aHa~sa~~~s~~~~pl~L~vsGg~t~l~~~~~~~~~~lg~t~d~S~G~~fD~vA~~LGl~---y~g~~~le~lA 185 (334)
T 3eno_A 109 GVNHPLGHIEIGRRVTGAIDPVMLYVSGGNTQVIAHVNGRYRVLGETLDIGIGNMIDKFAREAGIP---FPGGPEIEKLA 185 (334)
T ss_dssp EECHHHHHHHHHHHHHTCSSCEEEEESSSCEEEEEECSSBEEEEEEBSSCCHHHHHHHHHTTTTCC---SCHHHHHHTTG
T ss_pred EeccHHHHHHHHHhcCCCCCCEEEEEECCCcEEEEEeCCEEEEeccCCCccHHHHHHHHHHHcCCC---CCCHHHHHHHH
Confidence 999999999999999998889999999999999988889999999999999999999999999999 896 9999998
Q ss_pred h
Q psy16095 240 K 240 (241)
Q Consensus 240 ~ 240 (241)
.
T Consensus 186 ~ 186 (334)
T 3eno_A 186 M 186 (334)
T ss_dssp G
T ss_pred h
Confidence 6
No 2
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=100.00 E-value=6.6e-49 Score=378.65 Aligned_cols=180 Identities=53% Similarity=0.944 Sum_probs=169.7
Q ss_pred eEEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEEe
Q psy16095 2 VIAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTILS 81 (241)
Q Consensus 2 ~~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 81 (241)
|++|||||||++||+||++++ +++++
T Consensus 6 m~iL~i~ts~~~~~~al~~~~------------------------------------------------------~~~~~ 31 (540)
T 3en9_A 6 MICLGLEGTAEKTGVGIVTSD------------------------------------------------------GEVLF 31 (540)
T ss_dssp CEEEEEECSSSEEEEEEEETT------------------------------------------------------SCEEE
T ss_pred ceEEEEEcCccceEEEEEECC------------------------------------------------------CeEEE
Confidence 899999999999999999974 34777
Q ss_pred eeeeecccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEE
Q psy16095 82 NCRRTYVTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVG 161 (241)
Q Consensus 82 ~~~~s~~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~ 161 (241)
+.... .+.+||||+||.|+|+|.++|+++|+++|++ ++++|||+||||.|||++||||||+++||+||.++++|+++
T Consensus 32 ~~~~~-~~~~~gg~~p~~a~~~h~~~l~~~i~~~l~~--~~~~~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~ 108 (540)
T 3en9_A 32 NKTIM-YKPPKQGINPREAADHHAETFPKLIKEAFEV--VDKNEIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG 108 (540)
T ss_dssp EEEEE-CCCCCSSSSCCCHHHHHHHHHHHHHHHHHHH--SCGGGCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEEe-ecCCCCCCChHHHHHHHHHHHHHHHHHHHHh--CCHhHCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE
Confidence 77654 4789999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred eccchhhhhhcccccCCCCcEEEEEeCCceEEEEEeCCcEEEEeeeccChhhhHHHHHHHHhCCCCCCCCc-HHHHhhhh
Q psy16095 162 VNHCIGHIEMGRNVTKCENPTVLYVSGGNTQVIAYSRQRYRIFGETIDIAVGNCLDRFARVLKLSNDPSPG-YNIEQMAK 240 (241)
Q Consensus 162 V~HleaHa~sa~~~~~~~~Pl~L~VSGGhT~l~~~~~~~~~ilg~t~DdalGe~~Dkvar~LGl~~~p~PG-p~iE~lA~ 240 (241)
||||+||++++++.+++++|++|+||||||+++.+++++|+++|+|+|+|+|++|||+||+|||+ ||| |.||+||+
T Consensus 109 v~h~~aH~~~~~~~~~~~~p~~l~vsGg~t~~~~~~~~~~~~lg~t~d~s~G~~~D~~a~~lgl~---~~gg~~ie~lA~ 185 (540)
T 3en9_A 109 VNHCIAHIEIGKLTTEAEDPLTLYVSGGNTQVIAYVSKKYRVFGETLDIAVGNCLDQFARYVNLP---HPGGPYIEELAR 185 (540)
T ss_dssp EEHHHHHHHHHHHHSSCSSCEEEEECSSCEEEEEEETTEEEEEEEBSSSCHHHHHHHHHHHTTCC---SSCHHHHHHHHH
T ss_pred eccHHHHHHHHHHhcCCCCCcEEEEcCCCcEEEEEeCCceEEEeeccchHhHHHHHHHHHHcCCC---CCCHHHHHHHHH
Confidence 99999999999998888889999999999999988889999999999999999999999999999 896 99999996
Q ss_pred C
Q psy16095 241 K 241 (241)
Q Consensus 241 ~ 241 (241)
+
T Consensus 186 ~ 186 (540)
T 3en9_A 186 K 186 (540)
T ss_dssp T
T ss_pred c
Confidence 3
No 3
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=100.00 E-value=2.4e-44 Score=329.08 Aligned_cols=179 Identities=50% Similarity=0.846 Sum_probs=168.3
Q ss_pred eEEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEEe
Q psy16095 2 VIAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTILS 81 (241)
Q Consensus 2 ~~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 81 (241)
|++|||||||+++++||++++ +|++
T Consensus 1 M~iLgIdts~~~~~val~~~g-------------------------------------------------------~i~~ 25 (330)
T 2ivn_A 1 MLALGIEGTAHTLGIGIVSED-------------------------------------------------------KVLA 25 (330)
T ss_dssp CCEEEEECSSSEEEEEEECSS-------------------------------------------------------CEEE
T ss_pred CEEEEEEccCCCeEEEEEECC-------------------------------------------------------EEEE
Confidence 679999999999999999763 4777
Q ss_pred eeeeecccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEE
Q psy16095 82 NCRRTYVTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVG 161 (241)
Q Consensus 82 ~~~~s~~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~ 161 (241)
+...+|. .++||++|+.++|+|+++++++|+++|+++|++++|||+|||+.|||+||+||+|+++||+|+..+++|+++
T Consensus 26 ~~~~~~~-~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~GPG~~~~lrvg~~~ak~la~~~~~pl~~ 104 (330)
T 2ivn_A 26 NVFDTLT-TEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKYRKPIVG 104 (330)
T ss_dssp EEEEECC-CTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEEEee-cccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCchHHHHHHHHHHHHHHHHcCCCEEe
Confidence 7777765 667899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccchhhhhhcccccCCCCcEEEEEeCCceEEEEEeCCcEEEEeeeccChhhhHHHHHHHHhCCCCCCCC-cHHHHhhhh
Q psy16095 162 VNHCIGHIEMGRNVTKCENPTVLYVSGGNTQVIAYSRQRYRIFGETIDIAVGNCLDRFARVLKLSNDPSP-GYNIEQMAK 240 (241)
Q Consensus 162 V~HleaHa~sa~~~~~~~~Pl~L~VSGGhT~l~~~~~~~~~ilg~t~DdalGe~~Dkvar~LGl~~~p~P-Gp~iE~lA~ 240 (241)
|+|+++|++++++ +++++|++|++|||||+++..+.++|+++|+|+|||+|++||++|++|||+ || |+.||+||.
T Consensus 105 v~h~~aHa~~a~~-~~~~~~~~l~v~GG~t~~i~~~~~~~~~lg~t~dds~Gr~fD~vA~~LGl~---~~~~~~le~lA~ 180 (330)
T 2ivn_A 105 VNHCIAHVEITKM-FGVKDPVGLYVSGGNTQVLALEGGRYRVFGETLDIGIGNAIDVFARELGLG---FPGGPKVEKLAE 180 (330)
T ss_dssp EEHHHHHHHGGGG-GTCCSCEEEEECSSCEEEEEEETTEEEEEEEBSSSCHHHHHHHHHHHHTCC---SCHHHHHHHHHH
T ss_pred eCcHHHHHHHHhh-cCCCCCeEEEEcCCCceEEEEcCCeEEEEEeecCchhHHHHHHHHHHhCCC---CCcHHHHHHHhh
Confidence 9999999999999 888889999999999999988899999999999999999999999999999 67 599999986
No 4
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=99.96 E-value=6e-29 Score=216.83 Aligned_cols=148 Identities=16% Similarity=0.277 Sum_probs=118.3
Q ss_pred CeEEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEE
Q psy16095 1 MVIAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTIL 80 (241)
Q Consensus 1 ~~~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 80 (241)
.|++|||||||+++||||++++ +++
T Consensus 1 ~M~iLaIdTS~~~~svAl~~~~-------------------------------------------------------~~~ 25 (213)
T 3r6m_A 1 SAKILAIDTATENCSVALLVND-------------------------------------------------------QVI 25 (213)
T ss_dssp -CCEEEEECSSSEEEEEEESSS-------------------------------------------------------CEE
T ss_pred CCEEEEEEccCcceEEEEEECC-------------------------------------------------------EEE
Confidence 4889999999999999999863 345
Q ss_pred eeeeeecccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeE
Q psy16095 81 SNCRRTYVTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIV 160 (241)
Q Consensus 81 ~~~~~s~~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli 160 (241)
++. +.+.|+|+++|+++|+++|+++|++++|||+|||+.|||||||||||+++||+||+.+++|++
T Consensus 26 ~~~--------------~~~~~~Hs~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~~iPl~ 91 (213)
T 3r6m_A 26 SRS--------------EVAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMI 91 (213)
T ss_dssp EEE--------------EECCSCCHHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EEE--------------EechHHHHHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHhCCCEE
Confidence 443 356788999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccchhhhhhcccccCCCCcEEEEEeCCceEEEE--Ee---CCcEEEEeeeccChhhhHHHH
Q psy16095 161 GVNHCIGHIEMGRNVTKCENPTVLYVSGGNTQVIA--YS---RQRYRIFGETIDIAVGNCLDR 218 (241)
Q Consensus 161 ~V~HleaHa~sa~~~~~~~~Pl~L~VSGGhT~l~~--~~---~~~~~ilg~t~DdalGe~~Dk 218 (241)
+|||+++|+..+....+. ..++..++....++|. ++ ++.++.+.+..-.++.++.++
T Consensus 92 gVstL~a~a~~~~~~~~~-~~v~~~~DARr~evY~~~y~~~~~~~~~~~~~~~v~~~~~~~~~ 153 (213)
T 3r6m_A 92 GVSTLAAMAQASYRLHGA-TDVAVAIDARMSEVYWARYSRQENGEWIGVDEECVIPPARLAEE 153 (213)
T ss_dssp EEEHHHHHHHHHHHHHCC-SEEEEEECCSTTCEEEEEEEECTTSCEEEEEEEEEECHHHHHHS
T ss_pred EEcCHHHHHHhhhhcCCC-cEEEEEEECCCCCeeeeEeeccCCCceEecccceeCCHHHHHHH
Confidence 999999999876543221 2467778877766666 32 456666665554444444433
No 5
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=99.96 E-value=3.7e-28 Score=212.25 Aligned_cols=120 Identities=15% Similarity=0.120 Sum_probs=101.1
Q ss_pred hhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEEeccchhhhhhcccccC
Q psy16095 98 RETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVGVNHCIGHIEMGRNVTK 177 (241)
Q Consensus 98 e~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~HleaHa~sa~~~~~ 177 (241)
+.+.|+|+++|+++|+++|+++|++++|||+|||+.|||||||||||+++||+||.++++|+++|||+++|++....
T Consensus 39 ~~~~r~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTGlRiG~~~Ak~La~~~~iPl~gVs~l~a~a~~~~~--- 115 (218)
T 2a6a_A 39 YTGEKKHAEILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLTGLRVGIATVVGLVSPYDIPVAPLNSFEMTAKSCPA--- 115 (218)
T ss_dssp EESCGGGGGHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHGGGTCCEEEECHHHHHHHTCSS---
T ss_pred ecchHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchHhHHHHHHHHHHHHHHcCCCEEEeCcHHHHHhhccc---
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999987542
Q ss_pred CCCcEEEEEeCCceEEEE--Ee-CCcEEEEeeeccChhhhHHHHHHH
Q psy16095 178 CENPTVLYVSGGNTQVIA--YS-RQRYRIFGETIDIAVGNCLDRFAR 221 (241)
Q Consensus 178 ~~~Pl~L~VSGGhT~l~~--~~-~~~~~ilg~t~DdalGe~~Dkvar 221 (241)
..+++..++....++|. ++ ++.++.+.+..-.++.++.+.+..
T Consensus 116 -~~~v~~~iDARr~eVY~a~y~~~~~~~~~~~~~v~~~~~l~~~l~~ 161 (218)
T 2a6a_A 116 -DGVVLVARRARKGYHYCAVYLKDKGLNPLKEPSVVSDEELEEITKE 161 (218)
T ss_dssp -CEEEEEEEECSTTEEEEEEEEESSSCEEEEEEEEEEHHHHHHHHHH
T ss_pred -CCcEEEEEECCCCcEEEEEEeCCCceEeecccccCCHHHHHHHHHh
Confidence 23567778888878877 33 555666666666666666666543
No 6
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=99.95 E-value=7.7e-28 Score=211.03 Aligned_cols=97 Identities=21% Similarity=0.282 Sum_probs=87.3
Q ss_pred hhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEEeccchhhhhhcccccC
Q psy16095 98 RETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVGVNHCIGHIEMGRNVTK 177 (241)
Q Consensus 98 e~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~HleaHa~sa~~~~~ 177 (241)
+.+.|+|+++|+++|+++|+++|++++|||+|||+.|||||||||||+++||+||.++++|+++|+||++|+++++..++
T Consensus 28 ~~~~~~h~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRig~~~ak~la~~~~~Pl~~V~~l~a~a~~~~~~~~ 107 (231)
T 2gel_A 28 ELCPREHTQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGVSTLATMAQGAWRKTG 107 (231)
T ss_dssp EECCSCCHHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHHTTTCCEEEECHHHHHHHHHHHHHC
T ss_pred hhhhHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHHHHHHHHHHHHHcCCCEEEeccHHHHHHHHhhccC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999998765433
Q ss_pred CCCcEEEEEeCCceEEEE
Q psy16095 178 CENPTVLYVSGGNTQVIA 195 (241)
Q Consensus 178 ~~~Pl~L~VSGGhT~l~~ 195 (241)
+.++++++++.+.++|.
T Consensus 108 -~~~v~~~~DArrgevY~ 124 (231)
T 2gel_A 108 -ATRVLAAIDARMGEVYW 124 (231)
T ss_dssp -CSEEEEEEEETTTEEEE
T ss_pred -CceEEEEEECCCCcEEE
Confidence 34577788887777776
No 7
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=99.88 E-value=2.5e-24 Score=210.79 Aligned_cols=127 Identities=17% Similarity=0.172 Sum_probs=107.1
Q ss_pred HHHHHHhhCCCCcCCcCEEEEEcC-CCCCChhHHH-------HHH----HHHHHHHhCCCeEEeccchhhhhhcccccCC
Q psy16095 111 VLKEALDQAKVSRDDIDVICYTKG-PGMGGPLTVV-------AIV----ARTLALLWNKPIVGVNHCIGHIEMGRNVTKC 178 (241)
Q Consensus 111 ~I~~~L~~agi~~~DID~IAvt~G-PGs~tgLRVG-------~s~----Ak~LA~~l~iPli~V~HleaHa~sa~~~~~~ 178 (241)
+|++||+++|++++|||+|||+.+ |++...+++| ... +|.|+...+.|++.|+||++|++++++.+++
T Consensus 55 AI~~cL~~AGi~~~DID~Va~~~~~P~l~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~~~l~~v~HHlaHAaSAf~~Spf 134 (576)
T 3ven_A 55 AAAFCLAQAGLTVDDLDAVAFGWDLPAMYRERLGGWPHSDSEALDILLPRDVFPRRTDPPLHFVQHHLAHAASAYYFSGE 134 (576)
T ss_dssp HHHHHHHHHTCCGGGCSEEEESSCHHHHHHHHSSCCCCCHHHHHHHHSCTTTSCCSSCCCEEECCHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHcCCCHHHCcEEEEECCCccchhhhhhcchhhhhhhhhhhhhHHhcccccCCCeEecCHHHHHHHHhhhcCCC
Confidence 488999999999999999999999 9764333322 222 4556666789999999999999999999999
Q ss_pred CCcEEEEEeCC---ceEEEE-EeCCcEEEEeee-ccChhhhHHHHHHHHhCCCCCCCCc-HHHHhhhh
Q psy16095 179 ENPTVLYVSGG---NTQVIA-YSRQRYRIFGET-IDIAVGNCLDRFARVLKLSNDPSPG-YNIEQMAK 240 (241)
Q Consensus 179 ~~Pl~L~VSGG---hT~l~~-~~~~~~~ilg~t-~DdalGe~~Dkvar~LGl~~~p~PG-p~iE~lA~ 240 (241)
+..++|++||+ +|.++. .+++++++++++ .|+|+|++|+++|++|||+ |+| +.+..||.
T Consensus 135 e~aaVLvvDG~Ge~~T~~v~~~~~~~l~~l~~~~~p~SLG~~Y~~vT~~LGF~---~~gE~KVMGLAp 199 (576)
T 3ven_A 135 DRGAVLIVDGQGEEECVTLAHAEGGKITVLDTVPGAWSLGFFYEHVSEYTGLG---GDNPGKLMGLAA 199 (576)
T ss_dssp SEEEEEEECSCSSSEEEEEEEEETTEEEEEEEEEGGGCHHHHHHHHHHHTTSC---TTCHHHHHHHHT
T ss_pred CceEEEEEeCCCCCceEEEEEeeCCEEEEEEEeccCChHHHHHHHHHHHcCCC---CCCccceeEEcC
Confidence 75589999986 776665 699999999998 6999999999999999999 676 88998884
No 8
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.79 E-value=5e-19 Score=155.31 Aligned_cols=130 Identities=15% Similarity=0.217 Sum_probs=106.3
Q ss_pred CeEEeeeeeecccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhC
Q psy16095 77 NTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWN 156 (241)
Q Consensus 77 ~~il~~~~~s~~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~ 156 (241)
++|+++...++ |++||.++| +++++++++++...|++.++++.+|++ +.+
T Consensus 22 ~~il~~~~~~~------g~~~e~a~~--------vl~~~~~~a~~~~~~~~~~a~t~~~~~----------------a~~ 71 (276)
T 4ehu_A 22 EDIVASETISS------GTGTTGPSR--------VLEKLYGKTGLAREDIKKVVVTGYGRM----------------NYS 71 (276)
T ss_dssp TEEEEEEEESC------CTTSSHHHH--------HHHHHHHHHCCCGGGEEEEEEESTTGG----------------GCC
T ss_pred CeEEEEEEecC------CCCHHHHHH--------HHHHHHHHCCCcchhccccccCchHHH----------------Hhh
Confidence 46777776653 788998876 688999999999999999999999864 356
Q ss_pred CCeEEeccchhhhhhcccccCCCCcEEEEEeCCceEEEEE-eCCcE--EEEeeeccChhhhHHHHHHHHhCCCCCCCCc-
Q psy16095 157 KPIVGVNHCIGHIEMGRNVTKCENPTVLYVSGGNTQVIAY-SRQRY--RIFGETIDIAVGNCLDRFARVLKLSNDPSPG- 232 (241)
Q Consensus 157 iPli~V~HleaHa~sa~~~~~~~~Pl~L~VSGGhT~l~~~-~~~~~--~ilg~t~DdalGe~~Dkvar~LGl~~~p~PG- 232 (241)
.|++.|||+.||++++++..+..+ .++.+.|+++.+... .++.+ ..++++.|+..|+++|+++++||++ ||+
T Consensus 72 ~~~~~Vne~~aha~a~~~~~~~~~-~vl~lgG~~~~~~~~~~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~---~~~~ 147 (276)
T 4ehu_A 72 DADKQISELSCHARGVNFIIPETR-TIIDIGGQDAKVLKLDNNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVD---VSEL 147 (276)
T ss_dssp SCSEECCHHHHHHHHHHHHSTTCC-EEEEECSSCEEEEEECTTSCEEEEEEECSCSTTSHHHHHHHHHHHTCC---GGGH
T ss_pred CCCcccchHHHHHHHHHHhCCCCC-eEEEEcCCCceEEEEEecCceEEEEeCCCcCcchhhHHHHHHHHhccC---hhhh
Confidence 899999999999999887665444 456777777776665 44554 4779999999999999999999999 895
Q ss_pred HHHHhhhh
Q psy16095 233 YNIEQMAK 240 (241)
Q Consensus 233 p~iE~lA~ 240 (241)
+.+++.|+
T Consensus 148 ~~~~~~a~ 155 (276)
T 4ehu_A 148 GSISMNSQ 155 (276)
T ss_dssp HHHHTTCS
T ss_pred HHHHhcCC
Confidence 99988775
No 9
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=99.00 E-value=4.5e-10 Score=113.43 Aligned_cols=125 Identities=12% Similarity=0.056 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEEeccchhhhhhcccccCCCCcEEEE
Q psy16095 106 SKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVGVNHCIGHIEMGRNVTKCENPTVLY 185 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~HleaHa~sa~~~~~~~~Pl~L~ 185 (241)
+.+-..++.+.+-.+++ ..+.|++-.-|+..+. .+||.||..+++|+++|+||+||++++++.++++..++|.
T Consensus 435 ~~~~~~~~~~~~l~~~~--p~~~i~~D~HP~y~st-----~~Ak~lA~~~~iPli~VqHH~AHaaS~~~esg~~~~l~La 507 (772)
T 4g9i_A 435 EFMREAIAHFRKILRVK--NLDLIIADLHPAYNTT-----KLAMEMANELDVELLQVQHHYAHIASVMAEKNLDSVIGIA 507 (772)
T ss_dssp HHHHHHHHHHHTTSCSS--CSSCEEEESCTTCHHH-----HHHHHHHTTTTCCCCEECSHHHHTHHHHHHTTCCCCEEEE
T ss_pred HHHHHHHHHHHHhhCCC--CCCEEEEeCCCCcHHH-----HHHHHHHHhcCCCeeeehHHHHHHHHHHHhcCCCCeEEEE
Confidence 34445566666555544 3578999999987653 6899999999999999999999999999999886556777
Q ss_pred EeC---Cc-eEEEE-----EeC------CcEEEEeeeccChhhhHHHHHHHHhCCCCCCCCc-HHHHhhhh
Q psy16095 186 VSG---GN-TQVIA-----YSR------QRYRIFGETIDIAVGNCLDRFARVLKLSNDPSPG-YNIEQMAK 240 (241)
Q Consensus 186 VSG---Gh-T~l~~-----~~~------~~~~ilg~t~DdalGe~~Dkvar~LGl~~~p~PG-p~iE~lA~ 240 (241)
+|| |+ +.+|. ++. ++++.++.+.||++++.++|+++.+++. ||| +.+|++++
T Consensus 508 lDGsG~G~dgtiWgGE~L~~d~~~~eRlg~l~~l~l~ggDaA~~~p~r~a~~ll~~---~~G~~~i~~~~k 575 (772)
T 4g9i_A 508 LDGVGYGTDGNTWGGEVLYLGYEDVERLAHIDYYPLPGGDLASYYPLRALMGILSK---VYSIDELEGVIN 575 (772)
T ss_dssp CCSSEEETTTEEEESEEEECCSSSCEECCCBCCEEESSHHHHHHSTHHHHHHHHTT---TSCHHHHHHHHT
T ss_pred EEEeCCCCCCeEeeeEEEEecCcceEEeeeeeecCcccchhhhhhHHHHHHHHHhh---cCCchHHHHHHH
Confidence 776 33 33432 233 3456667788999999999999999999 776 99988764
No 10
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=98.61 E-value=2.8e-07 Score=93.00 Aligned_cols=123 Identities=14% Similarity=0.212 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEEeccchhhhhhcccccCCCCc-EEE
Q psy16095 106 SKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVGVNHCIGHIEMGRNVTKCENP-TVL 184 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~HleaHa~sa~~~~~~~~P-l~L 184 (241)
+.+-..++.+.+-.++++ +.|++-.-|+.++. .||..+++|++.|-||.||+++.+.+++.+.| +.+
T Consensus 437 ~~~~~~~~~~~~l~~~~p---~~i~~D~HP~y~st---------~~a~~~~~p~~~VQHHhAH~as~mae~~~~~~vlg~ 504 (761)
T 3vth_A 437 NYYIEQIERYKKLFRVDP---EVVAHDMHKGYLST---------QYAKSLDLPKIEVQHHHAHIASCMAEHNLDEKVIGI 504 (761)
T ss_dssp HHHHHHHHHHHHHTTCCC---SEEEEESCTTSHHH---------HHHHHSSSCEEEECHHHHHHHHHHHHTTCCSCEEEE
T ss_pred HHHHHHHHHHHHHhCCCC---CEEEEeCCCCchHH---------HHHHhcCCCeEEecHHHHHHHHHHHhcCCCCceEEE
Confidence 334455666666566654 89999999987542 24556799999999999999999888888777 688
Q ss_pred EEeC---Cc------eEEEEEeCCcEEEEeee------------------------------------------------
Q psy16095 185 YVSG---GN------TQVIAYSRQRYRIFGET------------------------------------------------ 207 (241)
Q Consensus 185 ~VSG---Gh------T~l~~~~~~~~~ilg~t------------------------------------------------ 207 (241)
.+|| |. .+++.++..+|+.+|.-
T Consensus 505 a~DGtGyG~dg~iWGGE~l~~~~~~~~r~~~l~~~~lpGgd~a~~~p~r~a~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 584 (761)
T 3vth_A 505 AYDGTGYGTDGNVWGAEILVCDLKSFERIAHLKYKPLPGNELAIKKIYRTALGFIFDNISFYKNFVEQVDSRELDIILKQ 584 (761)
T ss_dssp EEEEEEECTTSSEEEEEEEEECSSCEEEEEEECCEEEESTTHHHHCHHHHHHHHHGGGGGGGHHHHHHSCHHHHHHHHHH
T ss_pred EEeCCCcCCCCCeeeeEEEEEeCCceEEEeccccCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhhCCHHHHHHHHHH
Confidence 8997 32 35555666777766532
Q ss_pred --------ccChhhhHHHHHHHHhCCCCC-CCCc-H--HHHhhhh
Q psy16095 208 --------IDIAVGNCLDRFARVLKLSND-PSPG-Y--NIEQMAK 240 (241)
Q Consensus 208 --------~DdalGe~~Dkvar~LGl~~~-p~PG-p--~iE~lA~ 240 (241)
.-+|+|++||++|++||+.+. .|+| + .+|.+|.
T Consensus 585 ~~~~~n~p~tSS~GRLFDavAalLGl~~~~~YEGqaA~~LEalA~ 629 (761)
T 3vth_A 585 IDRKINTAYVSSMGRFFDAVAALIGVRKEVLFEGQAAMELESLMA 629 (761)
T ss_dssp HHHTSSEEEECCHHHHHHHHHHHTTSCSSCSSTTHHHHHHHHTCC
T ss_pred HHcCCCCCCCCcchhhHHHHHHHcCCCCCCccccchHHHHHHHHh
Confidence 238999999999999999743 4887 5 6999885
No 11
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.35 E-value=9e-06 Score=71.68 Aligned_cols=150 Identities=13% Similarity=0.132 Sum_probs=98.1
Q ss_pred eEEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEEe
Q psy16095 2 VIAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTILS 81 (241)
Q Consensus 2 ~~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 81 (241)
|+.||||.....+.++++|.+ |++++
T Consensus 3 ~~~lGiD~Gst~~k~~l~d~~------------------------------------------------------g~i~~ 28 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILKDG------------------------------------------------------KEIVA 28 (270)
T ss_dssp CEEEEEEECSSEEEEEEEETT------------------------------------------------------TEEEE
T ss_pred cEEEEEEeccceEEEEEEeCC------------------------------------------------------CCEEE
Confidence 678999999999999999874 45665
Q ss_pred eeeeecccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEE
Q psy16095 82 NCRRTYVTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVG 161 (241)
Q Consensus 82 ~~~~s~~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~ 161 (241)
...... .| .|.. .+..+++++.+ +++...+|++|++|- -|- .+ +.. +.. ..
T Consensus 29 ~~~~~~-----~~-~~~~-------~~~~~l~~l~~-~~~~~~~i~~i~~TG-~g~--~~---------~~~-~~~--~~ 79 (270)
T 1hux_A 29 KSLVAV-----GT-GTSG-------PARSISEVLEN-AHMKKEDMAFTLATG-YGR--NS---------LEG-IAD--KQ 79 (270)
T ss_dssp EEEEEC-----CS-SCCH-------HHHHHHHHHHH-HTCCGGGCSEEEEES-TTT--TT---------TTT-TCS--EE
T ss_pred EEEecC-----CC-CHHH-------HHHHHHHHHHH-cCCChhHEEEEEEeC-ccc--cc---------hhh-cCC--CC
Confidence 542221 12 4543 23345555544 466778899998853 221 00 011 233 44
Q ss_pred eccchhhhhhcccccCCCCcEEEEEeCCceEEEEEeCCcEE--EEeeeccChhhhHHHHHHHHhCCCCCCCCcHHHHhhh
Q psy16095 162 VNHCIGHIEMGRNVTKCENPTVLYVSGGNTQVIAYSRQRYR--IFGETIDIAVGNCLDRFARVLKLSNDPSPGYNIEQMA 239 (241)
Q Consensus 162 V~HleaHa~sa~~~~~~~~Pl~L~VSGGhT~l~~~~~~~~~--ilg~t~DdalGe~~Dkvar~LGl~~~p~PGp~iE~lA 239 (241)
++++.+|+..+.+..+. .-.++.+.|+.|.++..+++++. ...+...-.-|.++|.+++.||++ | ..++++|
T Consensus 80 v~Ei~ah~~ga~~~~~~-~~~vidiGGqd~k~i~~~~g~v~~~~mn~~ca~GtG~~le~~a~~lg~~---~--~el~~la 153 (270)
T 1hux_A 80 MSELSCHAMGASFIWPN-VHTVIDIGGQDVKVIHVENGTMTNFQMNDKCAAGTGRFLDVMANILEVK---V--SDLAELG 153 (270)
T ss_dssp ECHHHHHHHHHHHHCTT-CCEEEEEETTEEEEEEEETTEEEEEEEESSCCTTSHHHHHHHHHHHTCC---T--TTHHHHH
T ss_pred cccHHHHHHHHHHhCCC-CCEEEEECCCceEEEEEeCCceeeeccccccchhhHHHHHHHHHHhCCC---H--HHHHHHH
Confidence 99999999777665442 22678888888888888777653 344444556799999999999998 4 3455555
Q ss_pred h
Q psy16095 240 K 240 (241)
Q Consensus 240 ~ 240 (241)
+
T Consensus 154 ~ 154 (270)
T 1hux_A 154 A 154 (270)
T ss_dssp T
T ss_pred h
Confidence 3
No 12
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=98.30 E-value=3.6e-06 Score=83.73 Aligned_cols=122 Identities=17% Similarity=0.185 Sum_probs=88.2
Q ss_pred HHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEEeccchhhhhhcccccCC---CCc-E
Q psy16095 107 KVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVGVNHCIGHIEMGRNVTKC---ENP-T 182 (241)
Q Consensus 107 ~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~HleaHa~sa~~~~~~---~~P-l 182 (241)
.+-..++.+.+-.++++ +.|++-.-|+.++. .+|..+++|++.|-||.||+++...+++. +.| +
T Consensus 341 ~~~~~~~~~~~l~~~~p---~~i~~D~HP~y~st---------~~a~~~~~~~~~vQHHhAH~~a~~ae~~~~~~~~~vl 408 (657)
T 3ttc_A 341 QWREALRLMQNIYNFTP---QYVVHDAHPGYVSC---------QWASEMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVI 408 (657)
T ss_dssp HHHHHHHHHHHHTTCCC---SEEEEESCTTCHHH---------HHHTTSCSCEEEECHHHHHHHHHHHHTTCCTTCCCEE
T ss_pred HHHHHHHHHHHHhCCCC---CEEEEcCCCCchHH---------HHHHHcCCCeEEeeHHHHHHHHHHHhcCCccCCCCEE
Confidence 34445566665556654 89999999987642 15566789999999999999998777766 457 6
Q ss_pred EEEEeC---Cc------eEEEEEeCCcEEEEee-----------------------------------------------
Q psy16095 183 VLYVSG---GN------TQVIAYSRQRYRIFGE----------------------------------------------- 206 (241)
Q Consensus 183 ~L~VSG---Gh------T~l~~~~~~~~~ilg~----------------------------------------------- 206 (241)
.+..|| |. .+++.++..+|+++|.
T Consensus 409 g~~~DG~G~G~Dg~iWGGE~l~~~~~~~~R~~hl~~~~lpGGd~a~~~p~R~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 488 (657)
T 3ttc_A 409 ALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYPETASVAAANWSV 488 (657)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEECSSCEEEEEESCCEECTTGGGGGTCTHHHHHHHHHHHCTTGGGSGGGHHHHHSCTHH
T ss_pred EEEEeCCccCCCCCeeeeEEEEEECCccEEEeecccCCCCCHHHHHHHHHHHHHHHHHHhccccccchhhhhcCHHHHHH
Confidence 888886 32 3555556666655542
Q ss_pred -----------eccChhhhHHHHHHHHhCCCCC--CCCc-H--HHHhhhh
Q psy16095 207 -----------TIDIAVGNCLDRFARVLKLSND--PSPG-Y--NIEQMAK 240 (241)
Q Consensus 207 -----------t~DdalGe~~Dkvar~LGl~~~--p~PG-p--~iE~lA~ 240 (241)
..-.|+|++||++|++||+.++ -|+| + .||++|.
T Consensus 489 ~~~~~~~~~n~~~tSS~GRLFDavAalLGl~~~~~~YEGqaA~~LEalA~ 538 (657)
T 3ttc_A 489 LARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYEGEAACALEALAA 538 (657)
T ss_dssp HHHHHHTTSSCCEEEEHHHHHHHHHHHHTCSCSSCSSTTHHHHHHHHHHH
T ss_pred HHHHHHcCCCCcccCccchHHHHHHHHcCCCCccCccCchhHHHHHHHHh
Confidence 1145799999999999999832 2887 5 5999985
No 13
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.12 E-value=0.097 Score=45.75 Aligned_cols=107 Identities=15% Similarity=0.136 Sum_probs=72.8
Q ss_pred EEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEEee
Q psy16095 3 IAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTILSN 82 (241)
Q Consensus 3 ~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 82 (241)
.+||||-....+.++++|.+ |+++..
T Consensus 7 ~~lgiDiggt~~~~~l~d~~------------------------------------------------------g~il~~ 32 (326)
T 2qm1_A 7 KIIGIDLGGTTIKFAILTTD------------------------------------------------------GVVQQK 32 (326)
T ss_dssp EEEEEEECSSEEEEEEEETT------------------------------------------------------CCEEEE
T ss_pred EEEEEEECCCEEEEEEECCC------------------------------------------------------CCEEEE
Confidence 79999999999999999974 345554
Q ss_pred eeeecccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCC---Ch-------hH-HHH-HHHHH
Q psy16095 83 CRRTYVTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMG---GP-------LT-VVA-IVART 150 (241)
Q Consensus 83 ~~~s~~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~---tg-------LR-VG~-s~Ak~ 150 (241)
...... .. .....-.+.+..++++++++.+++..+|.+|+++. ||.. .+ +. -+. .+.+.
T Consensus 33 ~~~~~~--~~------~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~igi~~-pG~vd~~~g~v~~~~~l~w~~~~~l~~~ 103 (326)
T 2qm1_A 33 WSIETN--IL------EDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGT-PGSVDIEKGTVVGAYNLNWTTVQPVKEQ 103 (326)
T ss_dssp EEEECC--CT------TTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEE-SSEEETTTTEEECBGGGTBCSCBCHHHH
T ss_pred EEEcCC--CC------CCHHHHHHHHHHHHHHHHHHcCCCccceeEEEEec-ccceeCCCCEEEecCCCCccCCchHHHH
Confidence 433321 11 11122456677889999999998888899999864 5521 11 10 123 45677
Q ss_pred HHHHhCCCeEEeccchhhhhhc
Q psy16095 151 LALLWNKPIVGVNHCIGHIEMG 172 (241)
Q Consensus 151 LA~~l~iPli~V~HleaHa~sa 172 (241)
|...+++|++-.|...+-+++-
T Consensus 104 l~~~~~~pv~v~ND~~aaa~~e 125 (326)
T 2qm1_A 104 IESALGIPFALDNDANVAALGE 125 (326)
T ss_dssp HHHHHCSCEEEEEHHHHHHHHH
T ss_pred HHHHhCCCEEEecHHHHHHHHH
Confidence 8888999999888877766553
No 14
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=94.31 E-value=0.75 Score=39.71 Aligned_cols=103 Identities=12% Similarity=0.072 Sum_probs=63.1
Q ss_pred CeEEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEE
Q psy16095 1 MVIAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTIL 80 (241)
Q Consensus 1 ~~~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 80 (241)
||.+||||-...++.++++|.+ |+++
T Consensus 1 mM~~lgiDiGgt~~~~~l~d~~------------------------------------------------------g~i~ 26 (299)
T 2e2o_A 1 MMIIVGVDAGGTKTKAVAYDCE------------------------------------------------------GNFI 26 (299)
T ss_dssp CCCEEEEEECSSCEEEEEECTT------------------------------------------------------SCEE
T ss_pred CeEEEEEEeCCCcEEEEEEcCC------------------------------------------------------CCEE
Confidence 7789999999999999999874 3455
Q ss_pred eeeeeecccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEE-cCCCCCChhHHHHHHHHHHHHHhCCCe
Q psy16095 81 SNCRRTYVTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYT-KGPGMGGPLTVVAIVARTLALLWNKPI 159 (241)
Q Consensus 81 ~~~~~s~~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt-~GPGs~tgLRVG~s~Ak~LA~~l~iPl 159 (241)
...+... . .. .+.....-.+.+..++++++++. ++.|+++ .||..-.+. ..+.+.|.. ++.|+
T Consensus 27 ~~~~~~~--~---~~-~~~~~~~~~~~i~~~i~~~~~~~------~~~igi~~~G~~~~~~~---~~l~~~l~~-~~~pv 90 (299)
T 2e2o_A 27 GEGSSGP--G---NY-HNVGLTRAIENIKEAVKIAAKGE------ADVVGMGVAGLDSKFDW---ENFTPLASL-IAPKV 90 (299)
T ss_dssp EEEEESC--C---CH-HHHCHHHHHHHHHHHHHHHHTSC------CSEEEEEETTCCSHHHH---HHHHHHHTT-SSSEE
T ss_pred EEEeCCC--C---Cc-ccCCHHHHHHHHHHHHHHHHhcC------CCEEEEEcCCCCchhHH---HHHHHHHHh-CCCCE
Confidence 4443221 0 00 01112223445556677766643 6788875 455111222 456677777 88999
Q ss_pred EEeccchhhhhhcc
Q psy16095 160 VGVNHCIGHIEMGR 173 (241)
Q Consensus 160 i~V~HleaHa~sa~ 173 (241)
+-.|...+-++...
T Consensus 91 ~v~ND~~aaa~~e~ 104 (299)
T 2e2o_A 91 IIQHDGVIALFAET 104 (299)
T ss_dssp EEEEHHHHHHHHHH
T ss_pred EEeCcHHHHHhhcc
Confidence 88887777666543
No 15
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=93.26 E-value=1.8 Score=37.87 Aligned_cols=66 Identities=14% Similarity=0.107 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHhhCCCCcC-CcCEEEEEcCCCCCChhHHHHHHHHHHHHHhC---CCeEEeccchhhhhh
Q psy16095 104 HKSKVLEVLKEALDQAKVSRD-DIDVICYTKGPGMGGPLTVVAIVARTLALLWN---KPIVGVNHCIGHIEM 171 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~-DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~---iPli~V~HleaHa~s 171 (241)
-.+.+..++++++++.+++.+ +|.+|+++ -||.... .-...+.+.|...++ .|++-.|...+.+++
T Consensus 48 ~~~~i~~~i~~~~~~~~~~~~~~i~gigi~-~pG~vd~-~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a 117 (347)
T 2ch5_A 48 CVERINEMVNRAKRKAGVDPLVPLRSLGLS-LSGGDQE-DAGRILIEELRDRFPYLSESYLITTDAAGSIAT 117 (347)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTCCBSEEEEE-ETTTTCH-HHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCcccceeEEEEe-ccCCCch-HHHHHHHHHHHHhcCCCCceEEEECcHHHHHHh
Confidence 356677788999998888777 89999985 4554432 134566777888886 899999987776665
No 16
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=92.75 E-value=1.7 Score=37.80 Aligned_cols=62 Identities=13% Similarity=-0.055 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCc--CEEEEE-cCCCCCChhHHHHHHHHHHHHHh--CCCeEEeccchhhhhhc
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDI--DVICYT-KGPGMGGPLTVVAIVARTLALLW--NKPIVGVNHCIGHIEMG 172 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DI--D~IAvt-~GPGs~tgLRVG~s~Ak~LA~~l--~iPli~V~HleaHa~sa 172 (241)
-.+.+..++++++++++++.++| ..|+++ .||......+ .|...+ +.|+.-.|...+-++..
T Consensus 52 ~~~~l~~~i~~~l~~~~~~~~~i~~~~igig~pG~v~~~~~~-------~l~~~~~~~~pv~v~NDa~aaa~ge 118 (305)
T 1zc6_A 52 SWQAVLSTLEAAFQQAGLPAAPASACAIGLGLSGVHNRQWAG-------EFESQAPGFARLSLATDGYTTLLGA 118 (305)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCGGGEEEEEEESCCCTTSHHH-------HHHHTCCCCSEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCChhhhccceEEEEecCCCchHHHH-------HHHHhCCCCceEEEECCHHHHHHhh
Confidence 35667788999999999888887 677774 3554333221 155566 68888888776655443
No 17
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=92.60 E-value=1.7 Score=38.76 Aligned_cols=89 Identities=17% Similarity=0.103 Sum_probs=64.0
Q ss_pred cCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEEeccchhhhhhcccccCCC----CcEEEEEe-CCceEEEEEe
Q psy16095 123 RDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVGVNHCIGHIEMGRNVTKCE----NPTVLYVS-GGNTQVIAYS 197 (241)
Q Consensus 123 ~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~HleaHa~sa~~~~~~~----~Pl~L~VS-GGhT~l~~~~ 197 (241)
.+|++.|++|-+ + +..++..+++|+.-++-+.+|+..+.+..+.. +|. ++++ ||-+.++.++
T Consensus 61 ~~~~~~i~~TG~----G--------~~~~~~~l~~~~~~v~Ei~~~~~Ga~~l~~~~~~~~~~~-~vIdIGg~dsii~v~ 127 (287)
T 2ews_A 61 QQQIEKLCLTGG----N--------AGVIAENINIPAQIFVEFDAASQGLGILLKEQGHDLADY-IFANVGTGTSLHYFD 127 (287)
T ss_dssp TSCCSEEEEEST----T--------HHHHHTTSSSCCEECCHHHHHHHHHHHHHHHTTCCCSCE-EEEEESSSEEEEEEC
T ss_pred ccCceEEEEECh----h--------HHhHhHhhCCCcceeehhHHHHHHHHHhcccCCCCcCCe-EEEEeCCCeEEEEEc
Confidence 467888888743 1 12233467889999999999998877654321 353 4444 5544466677
Q ss_pred CCcEEEEeeeccChhhhHHHHHHHHhCC
Q psy16095 198 RQRYRIFGETIDIAVGNCLDRFARVLKL 225 (241)
Q Consensus 198 ~~~~~ilg~t~DdalGe~~Dkvar~LGl 225 (241)
+++++..+.+.--. |-++|..+.+||.
T Consensus 128 ~~~f~r~~g~aaGg-GtFl~l~a~ll~~ 154 (287)
T 2ews_A 128 GQSQRRVGGIGTGG-GMIQGLGYLLSQI 154 (287)
T ss_dssp SSCEEEEEEESCSH-HHHHHHHHHHHCC
T ss_pred CCceEEcCccccch-hhHHHHHHHHhCC
Confidence 77999999888666 9999999999996
No 18
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=91.81 E-value=0.39 Score=39.36 Aligned_cols=21 Identities=19% Similarity=0.482 Sum_probs=19.3
Q ss_pred eEEEEEeeCCCceeEEEEeCC
Q psy16095 2 VIAIGFEGSANKLGIGIVDTK 22 (241)
Q Consensus 2 ~~~~~~e~s~~~~~~~~~~~~ 22 (241)
|+|||||-+...|+.||++.+
T Consensus 1 m~ILGIDPGl~~tG~gvi~~~ 21 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIRQV 21 (158)
T ss_dssp CEEEEEECCSSEEEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEEec
Confidence 789999999999999999864
No 19
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=90.89 E-value=0.99 Score=42.71 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=52.8
Q ss_pred CeEEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEE
Q psy16095 1 MVIAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTIL 80 (241)
Q Consensus 1 ~~~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 80 (241)
|..+||||=....+-++++|.+ |+++
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~------------------------------------------------------G~il 27 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHD------------------------------------------------------ANII 27 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTT------------------------------------------------------CCEE
T ss_pred CcEEEEEEcCCcceEEEEECCC------------------------------------------------------CCEE
Confidence 6789999999999999999874 4455
Q ss_pred eeeeeecc--cCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 81 SNCRRTYV--TPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 81 ~~~~~s~~--~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
+....... .+.-|.+ |.....--+.+..++++++++++++..+|.+|+++.
T Consensus 28 ~~~~~~~~~~~p~~g~~--e~dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~ 80 (510)
T 2p3r_A 28 SVSQREFEQIYPKPGWV--EHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITN 80 (510)
T ss_dssp EEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEE
T ss_pred EEEEEecccccCCCCcE--EECHHHHHHHHHHHHHHHHHHcCCChhheEEEEEeC
Confidence 54433331 1222222 222333455677788999999999999999999864
No 20
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=89.94 E-value=1.4 Score=41.94 Aligned_cols=30 Identities=27% Similarity=0.411 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 103 HHKSKVLEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 103 ~H~e~L~~~I~~~L~~agi~~~DID~IAvt 132 (241)
.--+.+..++++++++++++..+|.+|+++
T Consensus 73 ~~~~~i~~~i~~~~~~~~~~~~~I~~Igis 102 (520)
T 4e1j_A 73 EIWQTVVSTVKEAIEKSGITANDIAAIGIT 102 (520)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCcccEEEEEEe
Confidence 344667778999999999999999999985
No 21
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=89.70 E-value=1.5 Score=41.15 Aligned_cols=77 Identities=10% Similarity=0.116 Sum_probs=51.6
Q ss_pred CeEEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEE
Q psy16095 1 MVIAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTIL 80 (241)
Q Consensus 1 ~~~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 80 (241)
|..+||||=....+-++++|.+ |+++
T Consensus 1 M~~~lgiDiGtT~~k~~l~d~~------------------------------------------------------g~i~ 26 (495)
T 2dpn_A 1 MAFLLALDQGTTSSRAILFTLE------------------------------------------------------GRPV 26 (495)
T ss_dssp --CEEEEEECSSEEEEEEECTT------------------------------------------------------SCEE
T ss_pred CcEEEEEeeCCcceEEEEECCC------------------------------------------------------CCEE
Confidence 5678999999999999999874 3455
Q ss_pred eeeeeecc--cCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 81 SNCRRTYV--TPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 81 ~~~~~s~~--~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
+....... ....|.+ |.....--+.+..+++++++++++...+|.+|+++.
T Consensus 27 ~~~~~~~~~~~p~~g~~--e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis~ 79 (495)
T 2dpn_A 27 AVAKREFRQLYPKPGWV--EHDPLEIWETTLWAAREVLRRAGAEAGEVLALGITN 79 (495)
T ss_dssp EEEEEECCEECSSTTCC--EECHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEE
T ss_pred EEEEEeeceecCCCCcE--eeCHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEeC
Confidence 44433321 1233333 223334456677889999999998888999999863
No 22
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=89.35 E-value=1.5 Score=41.40 Aligned_cols=79 Identities=11% Similarity=0.089 Sum_probs=51.8
Q ss_pred eEEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEEe
Q psy16095 2 VIAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTILS 81 (241)
Q Consensus 2 ~~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 81 (241)
..+||||=....+-++++|.+ |++++
T Consensus 5 ~~~lgIDiGtts~k~~l~d~~------------------------------------------------------G~il~ 30 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALADRD------------------------------------------------------GGLHF 30 (511)
T ss_dssp CEEEEEEECSSEEEEEEECTT------------------------------------------------------SCEEE
T ss_pred cEEEEEEeCCCceEEEEECCC------------------------------------------------------CCEEE
Confidence 379999999999999999874 44555
Q ss_pred eeeeecc-cCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEc-CCC
Q psy16095 82 NCRRTYV-TPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTK-GPG 136 (241)
Q Consensus 82 ~~~~s~~-~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~-GPG 136 (241)
.....+. ..+..|- .|.....--+.+..++++++ +++++..+|.+|+++. +.+
T Consensus 31 ~~~~~~~~~~p~~g~-~e~dp~~~~~~~~~~i~~~~-~~~~~~~~I~~Igis~q~~~ 85 (511)
T 3hz6_A 31 QRSIALETYGDGNGP-VEQDAGDWYDAVQRIASSWW-QSGVDARRVSAIVLSGQMQN 85 (511)
T ss_dssp EEEEECCCBSTTSSC-CEECHHHHHHHHHHHHHHHH-TTTCCGGGEEEEEEEECCSC
T ss_pred EEEeecceecCCCCC-EEECHHHHHHHHHHHHHHHH-hcCCChhHeEEEEEeccccc
Confidence 5444331 1111221 12223344556777888888 8888889999999964 544
No 23
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=88.91 E-value=1.5 Score=41.48 Aligned_cols=76 Identities=20% Similarity=0.115 Sum_probs=51.8
Q ss_pred eEEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEEe
Q psy16095 2 VIAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTILS 81 (241)
Q Consensus 2 ~~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 81 (241)
..+||||-....+-++++|.+ |++++
T Consensus 7 ~~~lgIDiGtts~k~~l~d~~------------------------------------------------------G~il~ 32 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVRLP------------------------------------------------------DTVVA 32 (508)
T ss_dssp CEEEEEEECSSEEEEEEEETT------------------------------------------------------TEEEE
T ss_pred CEEEEEEecCcceEEEEECCC------------------------------------------------------CCEEE
Confidence 478999999999999999963 45665
Q ss_pred eeeeecc--cCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 82 NCRRTYV--TPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 82 ~~~~s~~--~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
....... ...-|.+ |.....--+.+..++++++++++++..+|.+|+++.
T Consensus 33 ~~~~~~~~~~p~~g~~--e~dp~~~~~~i~~~i~~~~~~~~~~~~~I~~Igis~ 84 (508)
T 3ifr_A 33 VASRPTTLSSPHPGWA--EEDPAQWWDNARAVLAELKTTAGESDWRPGGICVTG 84 (508)
T ss_dssp EEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHHHHCGGGCCEEEEEEEE
T ss_pred EEEEecceecCCCCce--EECHHHHHHHHHHHHHHHHHhcCCChhheEEEEEEC
Confidence 5444331 1222221 222333456677788999999999889999999853
No 24
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=88.76 E-value=1.4 Score=37.84 Aligned_cols=61 Identities=16% Similarity=0.071 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCC----------ChhH--HHHHHHHHHHHHhCCCeEEeccchhhhhhcc
Q psy16095 106 SKVLEVLKEALDQAKVSRDDIDVICYTKGPGMG----------GPLT--VVAIVARTLALLWNKPIVGVNHCIGHIEMGR 173 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~----------tgLR--VG~s~Ak~LA~~l~iPli~V~HleaHa~sa~ 173 (241)
+.+...+.+++++ .++.+|+++. ||.. +.+. -++.+++.| ..+++|++-.|...+.+++-.
T Consensus 40 ~~~~~~i~~~i~~-----~~i~gigi~~-pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~~pv~v~NDa~aaa~~e~ 112 (292)
T 2gup_A 40 EDLLAWLDQRLSE-----QDYSGIAMSV-PGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQLPVHLENDANCVGLSEL 112 (292)
T ss_dssp HHHHHHHHHHHTT-----SCCSEEEEEE-SSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGCCCEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcEEEEEe-cCcccCCCCEEEecCCCCcccCCCHHHHH-HHcCCCEEEechHHHHHHHHH
Confidence 3455666777765 5789999865 4421 1111 134567778 889999999998777666543
No 25
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=88.55 E-value=12 Score=32.72 Aligned_cols=50 Identities=16% Similarity=0.082 Sum_probs=34.8
Q ss_pred HHHHHHHHHhhCCCCcCCcCEEEEE-cCCCCCChhHHHHHHHHHHHHHhCCCeEEec
Q psy16095 108 VLEVLKEALDQAKVSRDDIDVICYT-KGPGMGGPLTVVAIVARTLALLWNKPIVGVN 163 (241)
Q Consensus 108 L~~~I~~~L~~agi~~~DID~IAvt-~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~ 163 (241)
+...++.++++.++++++|+.|+++ .+| .+--.+.+.+...++++.+-|+
T Consensus 40 ~~~~l~~ll~~~~~~~~~I~~iiISSVvp------~~~~~l~~~~~~~~~~~~~~v~ 90 (266)
T 3djc_A 40 LGIFLKSVLRENNCSPETIRKIAICSVVP------QVDYSLRSACVKYFSIDPFLLQ 90 (266)
T ss_dssp HHHHHHHHHHTTTCCGGGCCEEEEEESCH------HHHHHHHHHHHHHTCCCCEECC
T ss_pred HHHHHHHHHHHcCCChhhceEEEEecchH------hHHHHHHHHHHHHcCCCeEEEc
Confidence 5567888999999999999999985 444 2333344444455788777666
No 26
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=88.48 E-value=2 Score=40.34 Aligned_cols=75 Identities=19% Similarity=0.250 Sum_probs=50.9
Q ss_pred EEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEEee
Q psy16095 3 IAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTILSN 82 (241)
Q Consensus 3 ~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 82 (241)
.+||||-....+-++++|.+ |++++.
T Consensus 7 ~~lgIDiGtts~k~~l~d~~------------------------------------------------------G~il~~ 32 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQK------------------------------------------------------GEIAGV 32 (501)
T ss_dssp EEEEEEECSSEEEEEEECTT------------------------------------------------------SCEEEE
T ss_pred EEEEEEeCccceEEEEEcCC------------------------------------------------------CCEEEE
Confidence 79999999999999999874 445554
Q ss_pred eeeecc--cCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 83 CRRTYV--TPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 83 ~~~s~~--~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
...... ....|.+ |.....--+.+..++++++++++++..+|.+|+++.
T Consensus 33 ~~~~~~~~~p~~g~~--e~d~~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~ 83 (501)
T 3g25_A 33 AQREFKQYFPQSGWV--EHDANEIWTSVLAVMTEVINENDVRADQIAGIGITN 83 (501)
T ss_dssp EEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEE
T ss_pred EEeecccccCCCCcE--EECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEEC
Confidence 433321 1222222 222233445677788999999999999999999963
No 27
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=88.22 E-value=1 Score=42.95 Aligned_cols=78 Identities=13% Similarity=0.268 Sum_probs=52.6
Q ss_pred CeEEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEE
Q psy16095 1 MVIAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTIL 80 (241)
Q Consensus 1 ~~~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 80 (241)
|..+||||-....+-++++|.+ |+++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~------------------------------------------------------G~il 29 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQ------------------------------------------------------GRMV 29 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETT------------------------------------------------------SCEE
T ss_pred CcEEEEEEECcccEEEEEECCC------------------------------------------------------CCEE
Confidence 4579999999999999999964 4455
Q ss_pred eeeeeecc--cCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcC
Q psy16095 81 SNCRRTYV--TPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKG 134 (241)
Q Consensus 81 ~~~~~s~~--~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~G 134 (241)
+.....+. ...-|.+ |.....--+.+..++++++++++++..+|.+|+++.-
T Consensus 30 ~~~~~~~~~~~p~~g~~--eqdp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 83 (554)
T 3l0q_A 30 GQASREITMFKPKADFV--EQSSENIWQAVCNAVRDAVNQADINPIQVKGLGFDAT 83 (554)
T ss_dssp EEEEEECCCEEEETTEE--EECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred EEEEEecccccCCCCcc--ccCHHHHHHHHHHHHHHHHHHcCCCHhHEEEEEEcCC
Confidence 54433321 1111221 2223334556777889999999999999999999764
No 28
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=88.18 E-value=1.5 Score=36.28 Aligned_cols=21 Identities=24% Similarity=0.648 Sum_probs=19.8
Q ss_pred eEEEEEeeCCCceeEEEEeCC
Q psy16095 2 VIAIGFEGSANKLGIGIVDTK 22 (241)
Q Consensus 2 ~~~~~~e~s~~~~~~~~~~~~ 22 (241)
|+|||||-+-..||.||+|.+
T Consensus 1 MrILGIDPGl~~tG~gvi~~~ 21 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAVE 21 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEEC
T ss_pred CEEEEEccccCceEEEEEEec
Confidence 789999999999999999975
No 29
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=87.56 E-value=1.6 Score=39.61 Aligned_cols=69 Identities=9% Similarity=0.050 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEc-CC-----CC------CChhHHHHHHHHHHHHHhCCCeEEeccchhhhhh
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTK-GP-----GM------GGPLTVVAIVARTLALLWNKPIVGVNHCIGHIEM 171 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~-GP-----Gs------~tgLRVG~s~Ak~LA~~l~iPli~V~HleaHa~s 171 (241)
-.+.+..++++++++.+++..+|.+|+++. || |. +.+. -++.+++.|...+++|++-.|...+-+++
T Consensus 124 ~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~~w-~~~~l~~~l~~~~~~pv~v~NDa~aaala 202 (406)
T 1z6r_A 124 LLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDV-KEMPLGEALEQHTGVPVYIQHDISAWTMA 202 (406)
T ss_dssp HHHHHHHHHHHHHHHTGGGCCCEEEEEEEESSEEETTTTEEEECTTCTTC-SSBCHHHHHHHHHSSCEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCcCceeEEEEEeecCEeCCCCEEecCCCCCCc-cCCCHHHHHHHHHCCCEEEechhHHHHHH
Confidence 345677789999999888778899998853 44 21 1011 13456677888899999988877766655
Q ss_pred cc
Q psy16095 172 GR 173 (241)
Q Consensus 172 a~ 173 (241)
-.
T Consensus 203 E~ 204 (406)
T 1z6r_A 203 EA 204 (406)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 30
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=87.52 E-value=2.3 Score=40.14 Aligned_cols=76 Identities=13% Similarity=0.155 Sum_probs=51.0
Q ss_pred eEEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEEe
Q psy16095 2 VIAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTILS 81 (241)
Q Consensus 2 ~~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 81 (241)
..+||||=....+-++++|.+ |++++
T Consensus 5 ~~~lgIDiGtts~k~~l~d~~------------------------------------------------------G~il~ 30 (506)
T 3h3n_X 5 NYVMAIDQGTTSSRAIIFDRN------------------------------------------------------GKKIG 30 (506)
T ss_dssp CEEEEEEECSSEEEEEEEETT------------------------------------------------------SCEEE
T ss_pred CEEEEEEcCCCceEEEEECCC------------------------------------------------------CCEEE
Confidence 479999999999999999974 44555
Q ss_pred eeeeecc--cCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 82 NCRRTYV--TPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 82 ~~~~s~~--~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
....... ...-|.+ |.....--+.+..++++++++++++..+|.+|+++.
T Consensus 31 ~~~~~~~~~~p~~g~~--e~dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~ 82 (506)
T 3h3n_X 31 SSQKEFPQYFPKSGWV--EHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITN 82 (506)
T ss_dssp EEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEE
T ss_pred EEEEecCccCCCCCcE--EECHHHHHHHHHHHHHHHHHHcCCChhheEEEEeeC
Confidence 4433321 1222222 222233445677788999999999999999999963
No 31
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=87.46 E-value=2.1 Score=40.54 Aligned_cols=32 Identities=28% Similarity=0.268 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEE-cCCC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYT-KGPG 136 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt-~GPG 136 (241)
-+.+..+++++++++++++++|.+|+++ .+.+
T Consensus 53 w~~~~~~i~~~l~~~~~~~~~I~aIgis~q~~~ 85 (526)
T 3ezw_A 53 WATQSSTLVEVLAKADISSDQIAAIGITNQRET 85 (526)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEEEEECSSC
T ss_pred HHHHHHHHHHHHHHcCCChhhEEEEEEeCCCCC
Confidence 3456678899999999999999999985 4554
No 32
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=87.37 E-value=3.4 Score=35.25 Aligned_cols=30 Identities=20% Similarity=0.127 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhCCCeEEeccchhhhhhcc
Q psy16095 144 VAIVARTLALLWNKPIVGVNHCIGHIEMGR 173 (241)
Q Consensus 144 G~s~Ak~LA~~l~iPli~V~HleaHa~sa~ 173 (241)
++.+++.|...+++|++-.|...+.+++-+
T Consensus 85 ~~~l~~~l~~~~~~pv~v~NDa~aaa~~e~ 114 (289)
T 2aa4_A 85 HFPLVKTLEQLTNLPTIAINDAQAAAWAEF 114 (289)
T ss_dssp TCCHHHHHHHHHCSCEEEEEHHHHHHHHHH
T ss_pred CCChHHHHHHHHCCCEEEechHHHHHHHHH
Confidence 345677888889999998898777666543
No 33
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=86.63 E-value=2.7 Score=39.41 Aligned_cols=76 Identities=16% Similarity=0.202 Sum_probs=51.4
Q ss_pred Ce-EEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeE
Q psy16095 1 MV-IAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTI 79 (241)
Q Consensus 1 ~~-~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 79 (241)
|| .+||||=....+-++++|.+ |++
T Consensus 1 M~~~~lgiDiGtt~~k~~l~d~~------------------------------------------------------g~~ 26 (497)
T 2zf5_O 1 MEKFVLSLDEGTTSARAIIFDRE------------------------------------------------------SNI 26 (497)
T ss_dssp CCCEEEEEEECSSEEEEEEECTT------------------------------------------------------CCE
T ss_pred CCcEEEEEecCCchhEEEEECCC------------------------------------------------------CCE
Confidence 44 68999998888889999874 345
Q ss_pred Eeeeeeecc--cCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 80 LSNCRRTYV--TPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 80 l~~~~~s~~--~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt 132 (241)
++....... .+..|.+. .....--+.+..++++++++++++..+|.+|+++
T Consensus 27 ~~~~~~~~~~~~p~~g~~e--~d~~~~~~~~~~~i~~~~~~~~~~~~~i~~Igis 79 (497)
T 2zf5_O 27 HGIGQYEFPQHYPRPGWVE--HNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVT 79 (497)
T ss_dssp EEEEEEECCCBCCSTTCCE--ECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred EEEEEeccceecCCCCcEE--ECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEe
Confidence 554433331 23333332 2223345567778888998888888899999985
No 34
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=85.54 E-value=3.1 Score=38.04 Aligned_cols=69 Identities=12% Similarity=0.009 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEc-CCC-CCCh-------h-HHHHHHHHHHHHHhCCCeEEeccchhhhhhc
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTK-GPG-MGGP-------L-TVVAIVARTLALLWNKPIVGVNHCIGHIEMG 172 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~-GPG-s~tg-------L-RVG~s~Ak~LA~~l~iPli~V~HleaHa~sa 172 (241)
-.+.+..++++++++.+++..+|.+|+++. ||- .-++ + --++.+++.|...+++|++-.|...+-+++-
T Consensus 147 ~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~~pV~v~NDa~aaalaE 225 (429)
T 1z05_A 147 VLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAE 225 (429)
T ss_dssp HHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEETTTTEEEECSSSBCSSBCHHHHHHHHHCSCEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCcCceEEEEEeccCcEeCCCCeEeecCCCCCCCCCHHHHHHHHhCCCEEEechhHHHHHHH
Confidence 356677789999999988888899998853 331 0011 1 0124556778888999999999777766553
No 35
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=84.93 E-value=9 Score=34.70 Aligned_cols=57 Identities=14% Similarity=0.218 Sum_probs=39.7
Q ss_pred HHHHHHHHhhCCCCcCCcCEEEEEc-CC-----C-C-----------------CChhHHHHHHHHHHHHHhCCCeEEecc
Q psy16095 109 LEVLKEALDQAKVSRDDIDVICYTK-GP-----G-M-----------------GGPLTVVAIVARTLALLWNKPIVGVNH 164 (241)
Q Consensus 109 ~~~I~~~L~~agi~~~DID~IAvt~-GP-----G-s-----------------~tgLRVG~s~Ak~LA~~l~iPli~V~H 164 (241)
..++++++++.++...+|.+| ++. || | . ...--.+...++.|+..+++|++-.|.
T Consensus 51 ~~~i~~~l~~~~~~~~~i~gI-i~~pG~vd~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~~~Pv~v~ND 129 (381)
T 1saz_A 51 EKIARQFVEETGYSLSSFSAF-VSRGGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSETGVPAYVVDP 129 (381)
T ss_dssp HHHHHHHHHTTTCCGGGCSEE-EEECCSCSCBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHHCCCEEEESC
T ss_pred HHHHHHHHHHcCCCccCceEE-EecCCCCCCCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhcCCCEEEeCC
Confidence 567888888888877889999 653 32 2 1 111122677788899999999997776
Q ss_pred ch
Q psy16095 165 CI 166 (241)
Q Consensus 165 le 166 (241)
..
T Consensus 130 an 131 (381)
T 1saz_A 130 VV 131 (381)
T ss_dssp TT
T ss_pred Cc
Confidence 54
No 36
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=84.61 E-value=3.1 Score=39.02 Aligned_cols=77 Identities=12% Similarity=0.092 Sum_probs=50.1
Q ss_pred CeEEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEE
Q psy16095 1 MVIAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTIL 80 (241)
Q Consensus 1 ~~~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 80 (241)
|..+||||=....+-++++|.+ |+++
T Consensus 3 m~~~lgIDiGtT~~k~~l~d~~------------------------------------------------------g~i~ 28 (503)
T 2w40_A 3 MNVILSIDQSTQSTKVFFYDEE------------------------------------------------------LNIV 28 (503)
T ss_dssp CEEEEEEEECSSEEEEEEEETT------------------------------------------------------CCEE
T ss_pred ccEEEEEEeCCcceEEEEECCC------------------------------------------------------CCEE
Confidence 3468999999999999999974 3455
Q ss_pred eeeeeecc--cCCCCcccchhhhHHHHHHHHHHHHHHHhhC--CCCcCCcCEEEEEc
Q psy16095 81 SNCRRTYV--TPPGEGFLPRETAQHHKSKVLEVLKEALDQA--KVSRDDIDVICYTK 133 (241)
Q Consensus 81 ~~~~~s~~--~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~a--gi~~~DID~IAvt~ 133 (241)
+....... ....|.+. .....--+.+..+++++++++ ++...+|.+|+++.
T Consensus 29 ~~~~~~~~~~~~~~g~~e--~d~~~~~~~i~~~i~~~~~~~~~~~~~~~i~~Igis~ 83 (503)
T 2w40_A 29 HSNNLNHEQKCLKPGWYE--HDPIEIMTNLYNLMNEGIKVLKDKYTSVIIKCIGITN 83 (503)
T ss_dssp EEEEEECCCBCCSTTCCE--ECHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred EEEEEeeeeecCCCCcEE--ECHHHHHHHHHHHHHHHHHHhhcCCCccceEEEEEcC
Confidence 44433321 12233322 222333456667888888877 77778899999853
No 37
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=83.88 E-value=3.4 Score=39.55 Aligned_cols=32 Identities=13% Similarity=0.056 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc-CCC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK-GPG 136 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~-GPG 136 (241)
-+.+..++++++++++++..+|.+|+++. +.+
T Consensus 66 ~~~~~~~i~~~l~~~~~~~~~I~~Igis~q~~~ 98 (572)
T 3jvp_A 66 VEVLTTSVPAVMKESGVDADDVIGIGVDFTACT 98 (572)
T ss_dssp HHHHTTHHHHHHHC---CCSCEEEEEEEECSSC
T ss_pred HHHHHHHHHHHHHHcCCChhHEEEEEEecCCCc
Confidence 45566789999999999999999999954 443
No 38
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=83.50 E-value=4.8 Score=37.89 Aligned_cols=77 Identities=12% Similarity=0.134 Sum_probs=49.2
Q ss_pred CeEEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEE
Q psy16095 1 MVIAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTIL 80 (241)
Q Consensus 1 ~~~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 80 (241)
|..+||||=....+-++++|.+ |+++
T Consensus 3 m~~~lgIDiGtts~K~~l~d~~------------------------------------------------------G~il 28 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDIN------------------------------------------------------GKAV 28 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEETT------------------------------------------------------SCEE
T ss_pred CCEEEEEEecCCceEEEEEcCC------------------------------------------------------CCEE
Confidence 3479999999989999999874 4455
Q ss_pred eeeeeecc--cCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEc-CCC
Q psy16095 81 SNCRRTYV--TPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTK-GPG 136 (241)
Q Consensus 81 ~~~~~s~~--~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~-GPG 136 (241)
+.....+. ....|.+ |.....--+.+..++++++++++ .+|.+|+++. +.+
T Consensus 29 ~~~~~~~~~~~p~~g~~--e~dp~~~~~~~~~~i~~~~~~~~---~~I~~Igis~q~~~ 82 (504)
T 3ll3_A 29 ASVSKGYPLIQTKVGQA--EEDPKLIFDAVQEIIFDLTQKID---GKIAAISWSSQMHS 82 (504)
T ss_dssp EEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHHTCS---SEEEEEEEEECSSC
T ss_pred EEEEeecceecCCCCcE--EECHHHHHHHHHHHHHHHHHhCC---CCeEEEEEECCCCc
Confidence 54444331 1222222 22233344566678888888776 7899999865 554
No 39
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=83.37 E-value=3.8 Score=36.88 Aligned_cols=69 Identities=10% Similarity=-0.012 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEc-CCCCC-Ch-------h-HHHHHHHHHHHHHhCCCeEEeccchhhhhhc
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTK-GPGMG-GP-------L-TVVAIVARTLALLWNKPIVGVNHCIGHIEMG 172 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~-GPGs~-tg-------L-RVG~s~Ak~LA~~l~iPli~V~HleaHa~sa 172 (241)
-.+.+..++++++++.+++..+|.+|+++. ||-.. .+ + --++.+++.|...+++|++-.|...+-+++-
T Consensus 127 ~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE 205 (380)
T 2hoe_A 127 TLNVMYRIIDRAKDMMEKLGSKLSALTVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADMGAVGE 205 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCEEEEEESSCEETTTTEECCCSSCTTBTSCHHHHHHHHHCSEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCcCcEEEEEEEeeccEECCCCEEeccCCCCCcCCChHHHHHHHhCCCEEEechHHHHHHHH
Confidence 345677788888988887778899999853 44110 11 1 0124566778888999999888776665543
No 40
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=82.71 E-value=7.9 Score=34.03 Aligned_cols=65 Identities=9% Similarity=-0.068 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCC---------Chh--HHHHHHHHHHHHHhCCCeEEeccchhhhhhc
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMG---------GPL--TVVAIVARTLALLWNKPIVGVNHCIGHIEMG 172 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~---------tgL--RVG~s~Ak~LA~~l~iPli~V~HleaHa~sa 172 (241)
-.+.+..++++++++.+ .+.+|+++. ||.. +.+ --++.+.+.|...+++|++-.|...+-+++-
T Consensus 63 ~~~~i~~~i~~~~~~~~----~~~gigi~~-pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pV~v~NDa~aaalgE 137 (327)
T 4db3_A 63 LLETIAGLVAKYDQEFA----CEGKIGLGL-PGMEDADDATVLTVNVPAAKGKPLRADLEAKIGRSVKIENDANCFALSE 137 (327)
T ss_dssp HHHHHHHHHHHHHHHHT----SCCEEEEEE-SEEECTTTCCEEESSSGGGTTSCHHHHHHHHHSSCCEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC----CccEEEEEe-eccEeCCCCEEEcCCCccccCCCHHHHHHHHHCCCEEEecchhHHHHHH
Confidence 34455566777766543 367887753 3321 111 1234566778888999998888776666554
Q ss_pred c
Q psy16095 173 R 173 (241)
Q Consensus 173 ~ 173 (241)
.
T Consensus 138 ~ 138 (327)
T 4db3_A 138 A 138 (327)
T ss_dssp H
T ss_pred H
Confidence 3
No 41
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=81.87 E-value=4.1 Score=38.67 Aligned_cols=22 Identities=18% Similarity=0.317 Sum_probs=18.8
Q ss_pred CeEEEEEeeCCCceeEEEEeCC
Q psy16095 1 MVIAIGFEGSANKLGIGIVDTK 22 (241)
Q Consensus 1 ~~~~~~~e~s~~~~~~~~~~~~ 22 (241)
|.++||||-+..-+=+.|+|.+
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~~ 30 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDAE 30 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEETT
T ss_pred CCEEEEEEEcCcCEEEEEECCC
Confidence 4579999999999999999963
No 42
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=81.72 E-value=3.9 Score=35.80 Aligned_cols=61 Identities=10% Similarity=0.019 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCC---C---------hhHHHHHHHHHHHHHhCCCeEEeccchhhhhhc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMG---G---------PLTVVAIVARTLALLWNKPIVGVNHCIGHIEMG 172 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~---t---------gLRVG~s~Ak~LA~~l~iPli~V~HleaHa~sa 172 (241)
.+.+..++++++++ .+|.+|+++. ||.. + ++ -+..+++.|...+++|++-.|...+-++.-
T Consensus 41 ~~~i~~~i~~~~~~-----~~i~gigi~~-pG~vd~~~g~v~~~~~l~w-~~~~l~~~l~~~~~~pv~v~NDa~aaal~E 113 (321)
T 3vgl_A 41 VDAICAAVAGASEG-----HDVEAVGIGA-AGYVDDKRATVLFAPNIDW-RHEPLKDKVEQRVGLPVVVENDANAAAWGE 113 (321)
T ss_dssp HHHHHHHHHHHHTT-----CCEEEEEEEE-SSEECTTSSCEEECSSSCC-EEECHHHHHHHHHCSCEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----cCceEEEEec-cccEeCCCCEEEeCCCCCC-cCCCHHHHHhhhhCCCEEEEehhhhHHHHH
Confidence 34455566666653 3788888853 3321 1 11 123456778888899999888776665543
No 43
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=81.63 E-value=3.8 Score=32.93 Aligned_cols=51 Identities=22% Similarity=0.298 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEEec
Q psy16095 106 SKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVGVN 163 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~ 163 (241)
+.|..+|+++|+++|+.+.+|++||--.--.--.|| ..+|..+++|+..++
T Consensus 25 ~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL-------~~~A~~lg~pl~~~~ 75 (145)
T 2w6k_A 25 EHLRALLERTLGEHGRSLAELDALASIDGKRDEPGL-------RQLATLLERPVHFLA 75 (145)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHH-------HHHHHHHTSCEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHH-------HHHHHHhCCCcEEeC
Confidence 447789999999999999999999975433333444 457888999999986
No 44
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=79.50 E-value=6.1 Score=34.69 Aligned_cols=68 Identities=16% Similarity=0.017 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEE-cCC-----C-------CCChhHHHHHHHHHHHHHhCCCeEEeccchhhhhh
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYT-KGP-----G-------MGGPLTVVAIVARTLALLWNKPIVGVNHCIGHIEM 171 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt-~GP-----G-------s~tgLRVG~s~Ak~LA~~l~iPli~V~HleaHa~s 171 (241)
.+.+..++++++++.+....+|.+|+++ .|| | .+.+++ ++.+++.|...+++|++-.|...+-+++
T Consensus 69 ~~~i~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~~~~~w~-~~~l~~~l~~~~~~pv~v~NDa~aaal~ 147 (343)
T 2yhw_A 69 INLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWN-SVDLRTPLSDTLHLPVWVDNDGNCAALA 147 (343)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEEEEEESSEEETTTTEEEECCTTSSSCS-SEECHHHHHHHHCSCEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCceEEEEEecccCEeCCCCEEEeCCcCCCCCc-CCCHHHHHHHHHCCCEEEechhHHHHHH
Confidence 4566677888887766555678888885 233 1 001111 2345667788889999988877776655
Q ss_pred cc
Q psy16095 172 GR 173 (241)
Q Consensus 172 a~ 173 (241)
-.
T Consensus 148 E~ 149 (343)
T 2yhw_A 148 ER 149 (343)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 45
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=78.63 E-value=9.2 Score=35.84 Aligned_cols=74 Identities=16% Similarity=0.180 Sum_probs=50.3
Q ss_pred EEEEEeeCCCceeEEEEeCCCCceeccccccccCCCCCCCCCchhhccccchhhhhhhhhhhccccCCCcCCCCCeEEee
Q psy16095 3 IAIGFEGSANKLGIGIVDTKKNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEEKFDYLSQNQRGKGSIGKKNTILSN 82 (241)
Q Consensus 3 ~~~~~e~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 82 (241)
.+||||=....+-++++|.+ |++++.
T Consensus 3 ~~lgiDiGtts~k~~l~d~~------------------------------------------------------G~i~~~ 28 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHS------------------------------------------------------GEIYST 28 (504)
T ss_dssp EEEEEEECSSEEEEEEECTT------------------------------------------------------SCEEEE
T ss_pred EEEEEecCCcceEEEEECCC------------------------------------------------------CCEEEE
Confidence 58999999999999999874 345554
Q ss_pred eeeecc--cCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 83 CRRTYV--TPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 83 ~~~s~~--~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt 132 (241)
...... .+..|.+ |.....--+.+..+++++++++++...+|.+|+++
T Consensus 29 ~~~~~~~~~p~~g~~--e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis 78 (504)
T 2d4w_A 29 GQLEHDQIFPRAGWV--EHNPEQIWNNVREVVGLALTRGNLTHEDIAAVGIT 78 (504)
T ss_dssp EEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred EEEecceecCCCCce--eECHHHHHHHHHHHHHHHHHHcCCCcccEEEEEEe
Confidence 433331 1223333 22223345667778899999988888899999985
No 46
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=78.60 E-value=3.8 Score=36.32 Aligned_cols=46 Identities=15% Similarity=0.226 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP 158 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP 158 (241)
-.+.++.+++++|+++|++++|||.+..-.+ +.|+- +.++..+++|
T Consensus 222 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~-----~~~i~----~~~~~~lgl~ 267 (323)
T 3il3_A 222 AVRELSNVVEETLLANNLDKKDLDWLVPHQA-----NLRII----TATAKKLEMD 267 (323)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTTCCEEEECCS-----CHHHH----HHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHH----HHHHHHcCcC
Confidence 4566788999999999999999999988765 45554 4455566665
No 47
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=78.49 E-value=3.1 Score=37.53 Aligned_cols=46 Identities=20% Similarity=0.316 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP 158 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP 158 (241)
-.+.++.+++++|+++|++++|||.+..-.+ +.|+--.+++ .+++|
T Consensus 252 ~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~-----n~~i~~~~~~----~lgl~ 297 (359)
T 3h78_A 252 ASQTLVRIAGEMLAAHELTLDDIDHVICHQP-----NLRILDAVQE----QLGIP 297 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECCS-----CHHHHHHHHH----HHTCC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHH----HhCcC
Confidence 3566888999999999999999999988766 5666544444 45665
No 48
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=78.39 E-value=2.6 Score=38.27 Aligned_cols=56 Identities=23% Similarity=0.160 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhC----CCeEEecc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWN----KPIVGVNH 164 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~----iPli~V~H 164 (241)
.+....+++++|+++|++++|||.|.+..--....+- ..+..++..++ +|.+.|+.
T Consensus 30 ~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~----~~a~~~~~~lGl~~~~p~~~v~~ 89 (395)
T 4e1l_A 30 VQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQ----NVARQIAINAGIPNSVPSYTVNK 89 (395)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTC----CHHHHHHHHTTCCTTSCEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcc----hHHHHHHHHcCCCCCceEEEccc
Confidence 4556679999999999999999999886432211111 23444555544 46777763
No 49
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=77.29 E-value=3.7 Score=36.24 Aligned_cols=47 Identities=19% Similarity=0.244 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC
Q psy16095 103 HHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP 158 (241)
Q Consensus 103 ~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP 158 (241)
.-.+.++.+++++|+++|++++|||.+..-.+ +.|+-- .++..+++|
T Consensus 231 ~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~-----~~~i~~----~~~~~lgl~ 277 (333)
T 4dfe_A 231 LAVNVLEKVAVEALEKANLSAEQIDWLIPHQA-----NIRIMQ----STCRKLGLP 277 (333)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCS-----CHHHHH----HHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHH----HHHHHhCCC
Confidence 34466788999999999999999999987655 555544 444556665
No 50
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=77.28 E-value=3 Score=37.96 Aligned_cols=56 Identities=27% Similarity=0.201 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhC----CCeEEecc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWN----KPIVGVNH 164 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~----iPli~V~H 164 (241)
.+....+++++|+++|++++|||.|.+...-+.+.+- ..+..++..++ +|.+.|+.
T Consensus 32 ~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~----~~a~~v~~~lGl~~~~p~~~v~~ 91 (396)
T 4dd5_A 32 VELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQ----NIARQIALGAGIPVEKPAMTINI 91 (396)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCS----CHHHHHHHHTTCCTTSCEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCc----hHHHHHHHHcCCCCCceEEEecc
Confidence 4556679999999999999999999986532222111 23444555544 56777763
No 51
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=77.16 E-value=2.2 Score=37.74 Aligned_cols=46 Identities=22% Similarity=0.303 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP 158 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP 158 (241)
-.+.++.+++++|+++|++++|||.+..-.+ +.|+-- .++..+++|
T Consensus 247 a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~-----~~~i~~----~~~~~Lgl~ 292 (350)
T 4ewp_A 247 AVWSMAKVAREALDAAGVEPEDLAAFIPHQA-----NMRIID----EFAKQLKLP 292 (350)
T ss_dssp HHHTHHHHHHHHHHHHTCCGGGEEEEEECCS-----CHHHHH----HHHHHTTCC
T ss_pred HHHhhhHHHHHHHHhhcCChhHhceEEecCC-----CHHHHH----HHHHHcCcC
Confidence 3456788999999999999999999998766 555544 445556665
No 52
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=77.13 E-value=2.6 Score=37.99 Aligned_cols=45 Identities=16% Similarity=0.204 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP 158 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP 158 (241)
.+.++.+++++|+++|++++|||.+..-.+ +.|+--.+++ .+++|
T Consensus 265 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq~-----n~~i~~~~~~----~Lgl~ 309 (365)
T 3gwa_A 265 LAEVPRAADRLLALAGEPRENIDCFVLHQA-----NRFMLDALRK----KMKIP 309 (365)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECCC-----CHHHHHHHHH----HHTCC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHH----HhCCC
Confidence 566788999999999999999999998765 6666555555 45555
No 53
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=76.99 E-value=6.1 Score=36.32 Aligned_cols=51 Identities=14% Similarity=0.180 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc-CCCCCChhHHHHHHHHHHHHHhCCCeEEec
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK-GPGMGGPLTVVAIVARTLALLWNKPIVGVN 163 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~-GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~ 163 (241)
++....+++++|+++|++++|||.|.+.. -|-.. .+ ..++..+++|.+.|+
T Consensus 56 sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~~----~A----~~va~~LgipafdV~ 107 (347)
T 3lma_A 56 RKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQNV----TA----NYVARHLKIPFLCLF 107 (347)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSST----TH----HHHHHHHCCCEEEBC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCchh----HH----HHHHHHhCCCEEEec
Confidence 44556699999999999999999998843 45222 12 223334478887775
No 54
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=76.98 E-value=9.2 Score=30.63 Aligned_cols=47 Identities=26% Similarity=0.258 Sum_probs=31.3
Q ss_pred HHHHHHHHhhCCCCcCCcCEEEEE-----cCCCCCChhHHH--HHHHHHHHHHhCCCeEEec
Q psy16095 109 LEVLKEALDQAKVSRDDIDVICYT-----KGPGMGGPLTVV--AIVARTLALLWNKPIVGVN 163 (241)
Q Consensus 109 ~~~I~~~L~~agi~~~DID~IAvt-----~GPGs~tgLRVG--~s~Ak~LA~~l~iPli~V~ 163 (241)
...|.+++++ .+++.|+|. +|-. +...+ ..|++.|+...++|++-|+
T Consensus 44 ~~~l~~li~~-----~~~~~ivVGlP~~~nGt~---~~~~~~ar~f~~~L~~~~~lpV~~vD 97 (150)
T 1vhx_A 44 LSRLSELIKD-----YTIDKIVLGFPKNMNGTV---GPRGEASQTFAKVLETTYNVPVVLWD 97 (150)
T ss_dssp HHHHHHHHTT-----SEEEEEEEECCCCBTTBC---CHHHHHHHHHHHHHHHHHCSCEEEEC
T ss_pred HHHHHHHHHH-----cCCCEEEEeeeecCCcch---hHHHHHHHHHHHHHHHhhCCCEEEec
Confidence 3456666665 468899987 4432 33333 4677777777899999965
No 55
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=76.82 E-value=12 Score=32.45 Aligned_cols=66 Identities=17% Similarity=0.062 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEc-CC-----C------CCChhHHHHHHHHHHHHHhCCCeEEeccchhhhhh
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTK-GP-----G------MGGPLTVVAIVARTLALLWNKPIVGVNHCIGHIEM 171 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~-GP-----G------s~tgLRVG~s~Ak~LA~~l~iPli~V~HleaHa~s 171 (241)
-.+.+..++++++++. ..++..|+++. || | .+.++ -++.+.+.|...+++|++-.|...+-+++
T Consensus 39 ~~~~i~~~i~~~~~~~---~~~i~gigi~~pG~vd~~~g~v~~~~~~~~w-~~~~l~~~l~~~~~~pv~v~NDa~aaal~ 114 (302)
T 3vov_A 39 VAEALAEAAERAEREA---GVRGEAIGLGTPGPLDFRRGVIRFAPNIPGV-QDFPIRRILEEATGRPVFLENDANAAALA 114 (302)
T ss_dssp HHHHHHHHHHHHHHHH---TCCCSSEEEEESSCEETTTTEEC---CCTTC-TTCCHHHHHHHHHSSCEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhc---cCCceEEEEEecccEeCCCCEEEcCCCCCCc-CCCChHHHHHHhhCCCEEEEechHHHHHH
Confidence 3444556677777664 36788888853 43 1 01122 13456677888899999988876666554
Q ss_pred cc
Q psy16095 172 GR 173 (241)
Q Consensus 172 a~ 173 (241)
-.
T Consensus 115 E~ 116 (302)
T 3vov_A 115 EH 116 (302)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 56
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=76.44 E-value=2.9 Score=37.53 Aligned_cols=45 Identities=22% Similarity=0.286 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP 158 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP 158 (241)
.+.++.+++++|+++|++++|||.+..-.+ +.|+-- .++..+++|
T Consensus 243 ~~~~~~~i~~~l~~~gl~~~did~~v~Hq~-----~~~i~~----~~~~~Lgl~ 287 (354)
T 4efi_A 243 LNAVPKLVSRTLDIAGRDKDSYDAFLFHQA-----NLFMLK----HLAKKAGLP 287 (354)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECCC-----CHHHHH----HHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCCC-----CHHHHH----HHHHHhCcC
Confidence 566788999999999999999999998776 556544 445556665
No 57
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=74.98 E-value=2.9 Score=37.99 Aligned_cols=56 Identities=21% Similarity=0.140 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCC----CeEEec
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNK----PIVGVN 163 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~i----Pli~V~ 163 (241)
-.+....+++++|+++|++++|||.|.+..--....+ -..+..++..++. |.+.|+
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~----~~~a~~i~~~lGl~~~~p~~~v~ 88 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDE----ANTARTAALAAGFPDTVTGYTIQ 88 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGG----CSHHHHHHHHTTCCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCcc----chHHHHHHHHcCCCCCceEEEec
Confidence 3455667999999999999999999998543222111 2344555655554 566665
No 58
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=74.05 E-value=4.3 Score=36.06 Aligned_cols=46 Identities=7% Similarity=-0.013 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP 158 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP 158 (241)
-.+.++.+++++|+++|++++|||.+..-.+ +.|+--.+++ .+++|
T Consensus 244 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~-----~~~i~~~~~~----~lgl~ 289 (345)
T 3s21_A 244 GIKLAQKTFVAAKQVLGWAVEELDQFVIHQV-----SRPHTAAFVK----SFGID 289 (345)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCSEEEECCS-----CHHHHHHHHH----HHTCC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC-----CHHHHHHHHH----HcCcC
Confidence 3456778999999999999999999998665 5665544444 45665
No 59
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=71.57 E-value=43 Score=28.86 Aligned_cols=64 Identities=11% Similarity=-0.082 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEE-cCCCC----------CChhHHHHHHHHHHHHHhCCCeEEeccchhhhhhcc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYT-KGPGM----------GGPLTVVAIVARTLALLWNKPIVGVNHCIGHIEMGR 173 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt-~GPGs----------~tgLRVG~s~Ak~LA~~l~iPli~V~HleaHa~sa~ 173 (241)
.+.+..++++++++. .++.+|+++ -||-. +..+ -++.+.+.|...+++|++-.|...+-+++-.
T Consensus 64 ~~~i~~~i~~~~~~~----~~i~~igi~~pG~vd~~~g~v~~~~~~~~-~~~~l~~~l~~~~~~pv~v~NDa~aaalgE~ 138 (327)
T 2ap1_A 64 LDAVCELVEEADQRF----GVKGSVGIGIPGMPETEDGTLYAANVPAA-SGKPLRADLSARLDRDVRLDNDANCFALSEA 138 (327)
T ss_dssp HHHHHHHHHHHHHHH----TSCCEEEEEESSBSCCTTSCCBCTTCTTT-TTSCHHHHHHHHHTSCEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc----CCccEEEEEeeeeEECCCCEEEccCCCcc-CCCChHHHHHHHHCCCEEEecHHHHHHHHHH
Confidence 345555666666543 247878874 34411 1112 2345567788888999998898777666533
No 60
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=71.31 E-value=6.2 Score=35.55 Aligned_cols=29 Identities=17% Similarity=0.367 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.+....+++++|+++|++++|||.|.+..
T Consensus 75 ~~La~~Aa~~aL~~agl~~~dId~vi~~t 103 (359)
T 3h78_A 75 SALMVPAARQAIEAAGLLPEDIDLLLVNT 103 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCHHHCCEEEEEe
Confidence 44455689999999999999999998854
No 61
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=71.19 E-value=22 Score=30.61 Aligned_cols=60 Identities=17% Similarity=0.086 Sum_probs=36.5
Q ss_pred HHHHHHHHHhhCCCCcCCcCEEEEEc-CC-----CC------CChhHHHHHHHHHHHHHhCCCeEEeccchhhhhhc
Q psy16095 108 VLEVLKEALDQAKVSRDDIDVICYTK-GP-----GM------GGPLTVVAIVARTLALLWNKPIVGVNHCIGHIEMG 172 (241)
Q Consensus 108 L~~~I~~~L~~agi~~~DID~IAvt~-GP-----Gs------~tgLRVG~s~Ak~LA~~l~iPli~V~HleaHa~sa 172 (241)
+...+.+.+++ ..+|.+|+++. || |. +.++ -++.+.+.|...+++|++-.|...+-++.-
T Consensus 43 ~~~~i~~~~~~----~~~i~gigi~~pG~vd~~~g~v~~~~~l~~w-~~~~l~~~l~~~~~~pV~v~NDa~aaal~E 114 (297)
T 4htl_A 43 ILAEMKVFLAE----NTDVTGIAVSAPGYVNPKTGLITMGGAIRRF-DNFNLKEWLEAETGLPVAIENDANCALLAE 114 (297)
T ss_dssp HHHHHHHHHHT----CTTCCEEEEEESSEECTTTCEEEECTTCGGG-TTEEHHHHHHHHHCSCEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHhh----cCCeeEEEEecCcceeCCCCEEEeCCCCCCc-cCCCHHHHHHHHHCcCEEEecHHHHHHHHH
Confidence 44445555553 35788998864 33 10 1122 234567778888999998888766655543
No 62
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=70.64 E-value=7.3 Score=34.17 Aligned_cols=42 Identities=19% Similarity=0.332 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHH
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTL 151 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~L 151 (241)
.+.+..+++++|+++|++++|||.|..-. ++.++.-.+++.|
T Consensus 230 ~~~~~~~i~~aL~~agl~~~did~v~~H~-----~~~~~~d~i~~~l 271 (339)
T 1mzj_A 230 VADVVPAAREALEVAGLTVGDLVAFVPHQ-----ANLRIIDVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGCSEEEECC-----SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHh
Confidence 35677899999999999999999998753 3677766655554
No 63
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=70.31 E-value=12 Score=32.62 Aligned_cols=62 Identities=10% Similarity=-0.053 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCC----------Chh--HHHHHHHHHHHHHh-CCCeEEeccchhhhhh
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMG----------GPL--TVVAIVARTLALLW-NKPIVGVNHCIGHIEM 171 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~----------tgL--RVG~s~Ak~LA~~l-~iPli~V~HleaHa~s 171 (241)
.+.+..+++++++ +..++.+|+++. ||.. +.+ --++.+++.|...+ ++|++-.|...+-+++
T Consensus 60 ~~~i~~~i~~~~~----~~~~i~gigi~~-pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~~pV~v~NDa~aaala 134 (321)
T 3r8e_A 60 VESMKLEIGNFLK----QYPIVKGVGIGW-PGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPHIHFKIENDAKCAALG 134 (321)
T ss_dssp HHHHHHHHHHHHH----HCTTCCEEEEEE-SSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTTSEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHh----ccCCeeEEEEEe-cccEECCCCEEEeCCCCccccCCCHHHHHHHHcCCCCEEEEchHHHHHHH
Confidence 4455567777775 346799999865 4421 111 01345667788889 9999988876665554
No 64
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=70.14 E-value=6.6 Score=34.37 Aligned_cols=43 Identities=16% Similarity=0.271 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHH
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLA 152 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA 152 (241)
.+.++.+++++|+++|++++|||.|..-.. +.++.-.+++.|.
T Consensus 223 ~~~~~~~i~~aL~~agl~~~did~~~~H~~-----~~~~~d~~~~~lg 265 (331)
T 2x3e_A 223 VTQMSDSVRRVLDRVGWQASDLHHLVPHQA-----NTRILAAVADQLD 265 (331)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECCC-----CHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHcC
Confidence 356778999999999999999999987433 6677666666553
No 65
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=69.48 E-value=7.6 Score=35.52 Aligned_cols=43 Identities=12% Similarity=0.208 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHH
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTL 151 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~L 151 (241)
-...++..++++|+++|++++|||.+..-.+ +.|+--.+++.|
T Consensus 289 a~~~~~~~i~~~L~~~gl~~~dId~~v~Hqa-----n~~i~~~~~~~l 331 (392)
T 3led_A 289 VVPLVSEMIIEHAREIGIDPHGLKRMWLHQA-----NINMNEIIGRKV 331 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECSS-----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEcCC-----CHHHHHHHHHHh
Confidence 3456778999999999999999999998665 677777777765
No 66
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=69.23 E-value=53 Score=27.97 Aligned_cols=60 Identities=12% Similarity=0.153 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhC--CCeEEeccchhhhhhc
Q psy16095 107 KVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWN--KPIVGVNHCIGHIEMG 172 (241)
Q Consensus 107 ~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~--iPli~V~HleaHa~sa 172 (241)
.+..++++++ +++..+++.|+++ -||.. -..+..+.+.|...++ .|+.-.|...+-++..
T Consensus 44 ~i~~~i~~~~---~~~~~~i~~igig-~pG~~--~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge 105 (291)
T 1zbs_A 44 ALRSEVLPAI---GQKASSIRAVYFY-GAGCT--PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARAL 105 (291)
T ss_dssp HHTTTTHHHH---TTSTTTCCEEEEE-ETTCC--TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHh---CCCcccccEEEEE-CCCCC--hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhh
Confidence 3434444433 3455689999884 24432 1223456677887888 4988888777666553
No 67
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=68.96 E-value=8.8 Score=33.00 Aligned_cols=43 Identities=14% Similarity=0.265 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHH
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLA 152 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA 152 (241)
.+.+..+++++|+++|++++|||.|..-.. +.++.-.+.+.|.
T Consensus 211 ~~~~~~~i~~al~~agl~~~did~~~~H~~-----~~~~~d~~~~~lg 253 (313)
T 1zow_A 211 VRIMGDASTRVVEKANLTSDDIDLFIPHQA-----NIRIMESARERLG 253 (313)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEECCS-----CHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHhC
Confidence 456778999999999999999999986433 5566655555443
No 68
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=68.77 E-value=4.7 Score=35.55 Aligned_cols=30 Identities=17% Similarity=0.282 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
-.+....+++++|+++|++++|||.|.+..
T Consensus 65 ~~~la~~Aa~~al~~ag~~~~~Id~vi~~t 94 (333)
T 4dfe_A 65 TSDLAFIASQRAIEAADIDPQSIDLIIVAT 94 (333)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 345556699999999999999999998854
No 69
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=68.63 E-value=6.3 Score=35.76 Aligned_cols=56 Identities=21% Similarity=0.277 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHhhC-CCCcCCcCEEEEEcC-CCCCChhHHHHHHHHHHHHHh----CCCeEEecc
Q psy16095 105 KSKVLEVLKEALDQA-KVSRDDIDVICYTKG-PGMGGPLTVVAIVARTLALLW----NKPIVGVNH 164 (241)
Q Consensus 105 ~e~L~~~I~~~L~~a-gi~~~DID~IAvt~G-PGs~tgLRVG~s~Ak~LA~~l----~iPli~V~H 164 (241)
.+.+..+++++|+++ |++++|||.|.+... |....+. ..++.++..+ ++|.+.|+.
T Consensus 28 ~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~----~~a~~~~~~~Gl~~~~p~~~v~~ 89 (387)
T 3goa_A 28 EDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGF----NIARNAALLAEIPHSVPAVTVNR 89 (387)
T ss_dssp HHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTT----THHHHHHHHTTCCTTSCCEEEEC
T ss_pred HHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCccccc----HHHHHHHHHcCCCCCCcEeEecC
Confidence 455667999999999 999999999998653 2211121 2344444444 456677764
No 70
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=67.71 E-value=6.7 Score=34.11 Aligned_cols=31 Identities=32% Similarity=0.321 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcC
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKG 134 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~G 134 (241)
-.+....+++++|+++|++++|||.|.+...
T Consensus 61 ~~~la~~A~~~al~~ag~~~~~id~vi~~t~ 91 (335)
T 1u6e_A 61 AASMATEACRRALSNAGLSAADIDGVIVTTN 91 (335)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 3455666899999999999999999998654
No 71
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=67.49 E-value=7 Score=33.99 Aligned_cols=43 Identities=26% Similarity=0.327 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHH
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLA 152 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA 152 (241)
.+.+..+++++|+++|++++|||.|..-.. +.++.-.+++.|.
T Consensus 231 ~~~~~~~i~~al~~agl~~~dId~~~~H~~-----~~~~~~~~~~~lg 273 (335)
T 1u6e_A 231 AFKMGDVGRRAMDAAGVRPDQIDVFVPHQA-----NSRINELLVKNLQ 273 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEECCS-----CHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcC
Confidence 446777999999999999999999987543 6666666666554
No 72
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=67.44 E-value=6.9 Score=33.80 Aligned_cols=58 Identities=14% Similarity=0.229 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC---eEEeccchhhhhh
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP---IVGVNHCIGHIEM 171 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP---li~V~HleaHa~s 171 (241)
.+.++.+++++|+++|++++|||.|..-.. +.++.-.++ ..++.| +..+-...+|..+
T Consensus 217 ~~~~~~~i~~aL~~agl~~~did~v~~H~~-----~~~~~d~i~----~~lg~~~~~~~~~~~~~Gn~~~ 277 (317)
T 1hnj_A 217 VTELAHIVDETLAANNLDRSQLDWLVPHQA-----NLRIISATA----KKLGMSMDNVVVTLDRHGNTSA 277 (317)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEECCS-----CHHHHHHHH----HHTTCCGGGBCCCHHHHCBCGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHH----HHcCCCHHHhHhhHhhhCcHHH
Confidence 346778999999999999999999987432 566655444 445554 2222234555544
No 73
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=66.73 E-value=47 Score=28.79 Aligned_cols=62 Identities=16% Similarity=0.037 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc-CCC-----C--C-Chh--H-H-HHHHHHHHHHHhCCCeEEeccchhhh
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK-GPG-----M--G-GPL--T-V-VAIVARTLALLWNKPIVGVNHCIGHI 169 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~-GPG-----s--~-tgL--R-V-G~s~Ak~LA~~l~iPli~V~HleaHa 169 (241)
.+.+..++++++++.+. ++.+|+++. ||- . + +.+ + . +..+++.|...+++|++-.|...+-+
T Consensus 47 ~~~i~~~i~~~~~~~~~---~i~gigi~~pG~vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~~pv~v~NDanaaa 121 (310)
T 3htv_A 47 VSGIGEMIDEQLRRFNA---RCHGLVMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQL 121 (310)
T ss_dssp HHHHHHHHHHHHHHHTE---EEEEEEEEESSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHTSCEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHHhcCC---CeeEEEEeccccEeCCCCEEEeCCCCCCccccCccHHHHHHHHhCCCEEEeeHHHHHH
Confidence 34455667777666542 477787753 331 1 1 111 1 1 24667889999999998888655433
No 74
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=66.46 E-value=7.2 Score=35.21 Aligned_cols=43 Identities=26% Similarity=0.254 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHH
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTL 151 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~L 151 (241)
-.+.++.+++++|+++|++++|||.|..-.. +.++.-.+++.|
T Consensus 285 ~~~~~~~~i~~aL~~agl~~~dId~~~~H~~-----~~~i~d~~~~~l 327 (393)
T 1ted_A 285 IFSGVAPVVTEMLWDNGLQISDIDLWAIHPG-----GPKIIEQSVRSL 327 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSCEEECCS-----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCCEEEECCC-----cHHHHHHHHHHc
Confidence 4567888999999999999999999987433 566655555543
No 75
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=66.29 E-value=14 Score=34.97 Aligned_cols=27 Identities=26% Similarity=0.245 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 106 SKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
+.+...+.+++++++. ..+|.+|+++.
T Consensus 46 ~~~~~~i~~~l~~~~~-~~~I~~Igis~ 72 (515)
T 3i8b_A 46 SYWWSAFQEAAEQAGG-LDDVSALAVGG 72 (515)
T ss_dssp HHHHHHHHHHHHHTTC-STTEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCC-ccCceEEEEeC
Confidence 3455567788888876 58999999853
No 76
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=65.84 E-value=6.2 Score=35.53 Aligned_cols=32 Identities=22% Similarity=0.404 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEE-EcCCC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICY-TKGPG 136 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAv-t~GPG 136 (241)
.+....+++++|+++|++++|||.|.+ +..|.
T Consensus 81 ~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~ 113 (365)
T 3gwa_A 81 ADLAYEAARKLFAQGAVGADQVDFVILCTQAPD 113 (365)
T ss_dssp HHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCC
Confidence 445556999999999999999999888 44553
No 77
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=65.54 E-value=9.4 Score=34.32 Aligned_cols=45 Identities=13% Similarity=0.108 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCe
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPI 159 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPl 159 (241)
.+.++ +++++|+++|++++|||.|..-.. +.++.-.++ ..+++|-
T Consensus 252 ~~~~~-~i~~aL~~agl~~~dId~v~~H~~-----~~~i~d~~~----~~lgl~~ 296 (382)
T 1u0m_A 252 EPLAP-ALKELAGEHGWDASDLDFYIVHAG-----GPRILDDLS----TFLEVDP 296 (382)
T ss_dssp HHHHH-HHHHHHHTTSCCSSCCSCCEEECS-----HHHHHHHHH----HHSCSCG
T ss_pred HHHHH-HHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHH----HHcCCCH
Confidence 45677 999999999999999999988544 666655444 4566653
No 78
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=64.07 E-value=6.9 Score=34.60 Aligned_cols=29 Identities=24% Similarity=0.418 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.+....+++++|+++|++++|||.|.+..
T Consensus 59 ~~La~~Aa~~aL~~ag~~~~~Id~vi~~t 87 (323)
T 3il3_A 59 ATMGFEAAKNAIEAAQINPQDIELIIVAT 87 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 44455689999999999999999999854
No 79
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=63.84 E-value=6.6 Score=35.12 Aligned_cols=29 Identities=14% Similarity=0.134 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.+....+++++|+++|++++|||.|.+..
T Consensus 67 ~~La~~Aa~~aL~~agi~~~~Id~vi~~t 95 (354)
T 4efi_A 67 GDLCRKAGEKLLAGLGWQADSIDALIFVS 95 (354)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 34455689999999999999999998854
No 80
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=62.59 E-value=41 Score=31.07 Aligned_cols=29 Identities=14% Similarity=0.115 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 102 QHHKSKVLEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 102 r~H~e~L~~~I~~~L~~agi~~~DID~IAvt 132 (241)
..--+.+..++++++++.+ .++|.+|+++
T Consensus 46 ~~~~~~i~~~i~~~~~~~~--~~~i~~Igis 74 (484)
T 2itm_A 46 EQWWQATDRAMKALGDQHS--LQDVKALGIA 74 (484)
T ss_dssp HHHHHHHHHHHHHHHHHSC--CTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCC--ccceEEEEEc
Confidence 3445567778888887753 5789999985
No 81
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=61.57 E-value=9 Score=32.79 Aligned_cols=40 Identities=18% Similarity=0.356 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHH
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVAR 149 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak 149 (241)
.+.+..+++++|+++|++++|||.|..-. + +-++.-.+.+
T Consensus 209 ~~~~~~~i~~al~~agl~~~did~~~~H~-~----~~~~~~~~~~ 248 (309)
T 2ebd_A 209 VRSMEEVCREVLEKAGVKPEEVSLVIPHQ-A----NVRIINALAE 248 (309)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECC-S----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcC-C----CHHHHHHHHH
Confidence 34677799999999999999999987643 2 4455444433
No 82
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=61.12 E-value=8.2 Score=34.20 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc-CCC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK-GPG 136 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~-GPG 136 (241)
.+....+++++|+++|++++|||.|.+.. -|.
T Consensus 69 ~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~ 101 (345)
T 3s21_A 69 SDAATQAARKALIDANIGIEKIGLLINTSVSRD 101 (345)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCC
Confidence 34455689999999999999999998854 444
No 83
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=60.76 E-value=9.1 Score=33.11 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC
Q psy16095 106 SKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP 158 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP 158 (241)
+.+..+++++|+++|++++|||.|..-.. +.++.-.+ ...++.|
T Consensus 220 ~~~~~~i~~al~~agl~~~did~~~~H~~-----~~~~~d~~----~~~lg~~ 263 (322)
T 1ub7_A 220 RVMNTATLEAIEKAGLTPEDIRLFVPHQA-----NLRIIDAA----RERLGLP 263 (322)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCS-----CHHHHHHH----HHTTTCC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHH----HHHcCCC
Confidence 56778999999999999999999987432 55555444 4445554
No 84
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=60.61 E-value=8.6 Score=33.25 Aligned_cols=31 Identities=6% Similarity=0.198 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcC
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKG 134 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~G 134 (241)
-.+....+++++|+++|++++|||.|.+...
T Consensus 50 ~~~la~~a~~~al~~ag~~~~~id~vi~~~~ 80 (322)
T 1ub7_A 50 TSDLAFKAVEDLLRRHPGALEGVDAVIVATN 80 (322)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 3455566899999999999999998887543
No 85
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=60.19 E-value=13 Score=33.75 Aligned_cols=29 Identities=17% Similarity=0.244 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhhCCCCcCCcCEEEEEcC
Q psy16095 106 SKVLEVLKEALDQAKVSRDDIDVICYTKG 134 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID~IAvt~G 134 (241)
+....+++++|+++|++++|||.|.++.-
T Consensus 83 ~La~~Aa~~aL~~ag~~~~dId~li~~t~ 111 (379)
T 3euo_A 83 PLAVEASRKAMAEARLVPAQITHMVSTTC 111 (379)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 33445899999999999999999998653
No 86
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=59.96 E-value=19 Score=33.87 Aligned_cols=20 Identities=10% Similarity=0.046 Sum_probs=16.4
Q ss_pred EEEEEeeCCCceeEEEEeCC
Q psy16095 3 IAIGFEGSANKLGIGIVDTK 22 (241)
Q Consensus 3 ~~~~~e~s~~~~~~~~~~~~ 22 (241)
.+||||=....+-++++|.+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~ 26 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLD 26 (482)
T ss_dssp -CEEEEECSSEEEEEEECTT
T ss_pred eEEEEEcCCCCeEEEEEECC
Confidence 68999988888888999853
No 87
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=59.12 E-value=79 Score=26.44 Aligned_cols=65 Identities=14% Similarity=0.055 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEE-cCC---C--CC-C----hhHHHHHHHHHHHHHhCCCeEEeccchhhhhh
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYT-KGP---G--MG-G----PLTVVAIVARTLALLWNKPIVGVNHCIGHIEM 171 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt-~GP---G--s~-t----gLRVG~s~Ak~LA~~l~iPli~V~HleaHa~s 171 (241)
.+.+..++++++++.+. ...+..|+++ -|| | .+ + +++ ++.+++.|...+++|++-.|...+-+++
T Consensus 55 ~~~i~~~i~~~~~~~~~-~~~~~~igi~~pG~v~~g~v~~~~~l~~~w~-~~~l~~~l~~~~~~pV~v~NDanaaala 130 (267)
T 1woq_A 55 AEAVALVVAELSARPEA-PAAGSPVGVTFPGIIQHGVVHSAANVDKSWL-NTDIDALLTARLGRPVEVINDADAAGLA 130 (267)
T ss_dssp HHHHHHHHHHHHTSTTC-CCTTCCEEEEESSCEETTEECCCTTSCGGGT-TCBHHHHHHHHHTSCEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccc-cCccceEEEEccceEcCCEEEeCCCCCCCCC-CCCHHHHHHHHHCCCEEEeehhHHHHHH
Confidence 44566677777765442 2345567764 244 1 11 1 232 4566788888899999999977766655
No 88
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=58.95 E-value=17 Score=32.55 Aligned_cols=29 Identities=14% Similarity=0.249 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.+....+++++|+++|++++|||.|.+..
T Consensus 55 ~~La~~Aa~~aL~~ag~~~~dId~vi~~t 83 (357)
T 3s3l_A 55 PRMAARAARAALGRGDVDPADVSLVLHSS 83 (357)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 34455689999999999999999999865
No 89
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=58.73 E-value=21 Score=32.43 Aligned_cols=48 Identities=15% Similarity=0.046 Sum_probs=32.1
Q ss_pred CCcCEEEEEc-CC-----C---C---CChhHHHHHHHHHHHHHhCCCeEEeccchhhhhh
Q psy16095 124 DDIDVICYTK-GP-----G---M---GGPLTVVAIVARTLALLWNKPIVGVNHCIGHIEM 171 (241)
Q Consensus 124 ~DID~IAvt~-GP-----G---s---~tgLRVG~s~Ak~LA~~l~iPli~V~HleaHa~s 171 (241)
.++.+|+++. || | . +++++-++.+++.|...+++|++-.|...+-+++
T Consensus 65 ~~i~gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~PV~veNDanaaAlg 124 (366)
T 3mcp_A 65 EAPVAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYG 124 (366)
T ss_dssp SCCCEEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSCEEEECHHHHHHHH
T ss_pred cCCeEEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCCEEEechhhHHHHH
Confidence 6799999874 44 1 0 1133214567788899999999888876665554
No 90
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=58.65 E-value=13 Score=31.89 Aligned_cols=30 Identities=23% Similarity=0.334 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKG 134 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~G 134 (241)
.+....+++++|+++|++++|||.|.+...
T Consensus 52 ~~l~~~a~~~al~~ag~~~~~id~vi~~~~ 81 (313)
T 1zow_A 52 SDLAYEASVKAIADAGIQPEDIDMIIVATA 81 (313)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 455566899999999999999999888643
No 91
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=58.29 E-value=13 Score=31.87 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcC
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKG 134 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~G 134 (241)
..+....+++++|+++|++++|||.|.+...
T Consensus 50 ~~~l~~~a~~~al~~ag~~~~~id~v~~~~~ 80 (309)
T 2ebd_A 50 ITYMATQAAKEALREANLSPEELDLIILATL 80 (309)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEEECS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 4455667899999999999999999988654
No 92
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=58.03 E-value=12 Score=33.92 Aligned_cols=29 Identities=21% Similarity=0.160 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.+....+.+++|+++|++++|||.|.+..
T Consensus 97 ~~La~~Aa~~AL~~ag~~~~dId~li~~t 125 (387)
T 3oit_A 97 PELAAEAAKKAIAEWGRPAADITHLVVTT 125 (387)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 34445599999999999999999998843
No 93
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=57.28 E-value=11 Score=33.17 Aligned_cols=32 Identities=22% Similarity=0.324 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc-CCC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK-GPG 136 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~-GPG 136 (241)
.+....+++++|+++|++++|||.|.+.. -|+
T Consensus 53 ~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~ 85 (321)
T 3il6_A 53 SDLCHQVAKQLLEKSGKQASEIDFILVATVTPD 85 (321)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCC
Confidence 44455689999999999999999998854 444
No 94
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=57.10 E-value=23 Score=32.13 Aligned_cols=29 Identities=14% Similarity=0.150 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.+....+++++|+++|++++|||.|.+..
T Consensus 116 ~~La~~Aa~~aL~~agl~~~~Id~vi~~t 144 (402)
T 3awk_A 116 PKLAKEAAISAIKQWGQPKSKITHLVFAT 144 (402)
T ss_dssp HHHHHHHHHHHHHHHCSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEE
Confidence 34445589999999999999999988743
No 95
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=55.75 E-value=13 Score=37.27 Aligned_cols=46 Identities=20% Similarity=0.143 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCC
Q psy16095 107 KVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNK 157 (241)
Q Consensus 107 ~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~i 157 (241)
....+.+++|+++|++++|||.|.++..++.... +.|-.++..++.
T Consensus 692 la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p-----~~a~~v~~~lGl 737 (979)
T 3tsy_A 692 LGKEAALKALKEWGQPKSKITHLVFCTTSGVEMP-----GADYKLANLLGL 737 (979)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSS-----CHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCC-----cHHHHHHHHcCC
Confidence 3445899999999999999999999766654322 234445555554
No 96
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=55.44 E-value=13 Score=34.08 Aligned_cols=56 Identities=23% Similarity=0.336 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCC----CeEEecc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNK----PIVGVNH 164 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~i----Pli~V~H 164 (241)
.+....+++++|+++|++++|||.|.+...-+.+. +-..++.++..++. |.+.|+.
T Consensus 56 ~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~----~~~~a~~~a~~lGl~~~~p~~~v~~ 115 (418)
T 2iik_A 56 DELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA----GAIMARIAQFLSDIPETVPLSTVNR 115 (418)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGG----GHHHHHHHHHHTTCCTTSCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccc----cccHHHHHHHHcCCCCCceEEEeCC
Confidence 44556689999999999999999988864322222 23445555554444 6777763
No 97
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=55.42 E-value=22 Score=31.46 Aligned_cols=30 Identities=17% Similarity=0.057 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
-.+....+++++|+++|++++|||.|.+..
T Consensus 95 ~~~la~~Aa~~al~~ag~~~~~id~vi~~t 124 (374)
T 2h84_A 95 VPDLAQQACLRALKDWGGDKGDITHIVSVT 124 (374)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 344555699999999999999999998743
No 98
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=54.98 E-value=15 Score=33.53 Aligned_cols=29 Identities=10% Similarity=0.192 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.+....+++++|+++|++++|||.|.+..
T Consensus 103 ~~La~~Aa~~aL~~ag~~~~dId~vi~~t 131 (393)
T 3ov2_A 103 PRLAKEAAEKAIKEWGRPKSEITHLVFCS 131 (393)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEE
Confidence 34445589999999999999999998843
No 99
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=54.81 E-value=10 Score=35.15 Aligned_cols=22 Identities=5% Similarity=-0.010 Sum_probs=18.7
Q ss_pred CeEEEEEeeCCCceeEEEEeCC
Q psy16095 1 MVIAIGFEGSANKLGIGIVDTK 22 (241)
Q Consensus 1 ~~~~~~~e~s~~~~~~~~~~~~ 22 (241)
|..+||||=....+-++++|.+
T Consensus 3 ~~~~lgiDiGtts~k~~l~d~~ 24 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLARYE 24 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEEec
Confidence 4579999999999999999864
No 100
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=54.68 E-value=13 Score=33.02 Aligned_cols=45 Identities=18% Similarity=0.240 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHhhCC------CCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCe
Q psy16095 105 KSKVLEVLKEALDQAK------VSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPI 159 (241)
Q Consensus 105 ~e~L~~~I~~~L~~ag------i~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPl 159 (241)
.+.+..+++++|+++| ++++|||.| .-.. +.++.-.+++ .+++|-
T Consensus 266 ~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~-----~~~i~d~~~~----~lgl~~ 316 (374)
T 2h84_A 266 GSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTG-----GKSILMNIEN----SLGIDP 316 (374)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCC-----CHHHHHHHHH----HTTCCG
T ss_pred HHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCC-----CHHHHHHHHH----HcCCCH
Confidence 4667789999999999 999999999 5432 6666655555 455553
No 101
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=53.95 E-value=18 Score=31.17 Aligned_cols=30 Identities=20% Similarity=0.336 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKG 134 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~G 134 (241)
.+....+.+++|+++|++++|||.|.+...
T Consensus 52 ~~l~~~a~~~al~~ag~~~~~id~vi~g~~ 81 (317)
T 1hnj_A 52 STMGFEAATRAIEMAGIEKDQIGLIVVATT 81 (317)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 455566899999999999999999887543
No 102
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=53.47 E-value=9.3 Score=34.27 Aligned_cols=29 Identities=17% Similarity=0.182 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHhhCCCCcCCcCEEEE
Q psy16095 103 HHKSKVLEVLKEALDQAKVSRDDIDVICY 131 (241)
Q Consensus 103 ~H~e~L~~~I~~~L~~agi~~~DID~IAv 131 (241)
.-.+.++.+++++|+++|++++|||.+.+
T Consensus 235 ~~~~~~~~~i~~~L~~~gl~~~did~~v~ 263 (357)
T 3s3l_A 235 RYIDLLVAAKTQALEDAGTAIEDIAHAVI 263 (357)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 34567888999999999999999999996
No 103
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=53.21 E-value=32 Score=31.93 Aligned_cols=56 Identities=16% Similarity=0.163 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCC----CeEEec
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNK----PIVGVN 163 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~i----Pli~V~ 163 (241)
.+....+++++|+++|++++|||.|.+...-+ ....+-..+..++..+++ |.+.|+
T Consensus 56 ~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~---~~~~~~~~a~~va~~lGl~~~~p~~~v~ 115 (442)
T 2wu9_A 56 DDLLAPVLRALIEKTNLNPSEVGDIVVGTVLA---PGSQRASECRMAAFYAGFPETVAVRTVN 115 (442)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCCEEEECCSS---BHHHHHHHHHHHHHHTTCCTTSCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeecC---ccCCCChHHHHHHHHcCCCCCceEEEeC
Confidence 34456689999999999999999988854321 122344566777776665 566665
No 104
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=53.05 E-value=22 Score=33.52 Aligned_cols=29 Identities=17% Similarity=0.244 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhhCCCCcCCcCEEEEEcC
Q psy16095 106 SKVLEVLKEALDQAKVSRDDIDVICYTKG 134 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID~IAvt~G 134 (241)
+....+++++|+++|++++|||.|.++.-
T Consensus 112 ~La~~Aa~~AL~~agi~~~dId~li~~t~ 140 (465)
T 3e1h_A 112 PLAVEASRKAMAEARLVPAQITHMVSTTC 140 (465)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEee
Confidence 33445899999999999999999998653
No 105
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=52.58 E-value=16 Score=33.06 Aligned_cols=56 Identities=18% Similarity=0.174 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhC----CCeEEecc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWN----KPIVGVNH 164 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~----iPli~V~H 164 (241)
.+....+++++|+++|++++|||.|.+...-+.+.+ -..+..++..++ .|.+.|+.
T Consensus 31 ~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~----~~~a~~ia~~lgl~~~~p~~~v~~ 90 (397)
T 1wl4_A 31 QDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCG----QNPVRQASVGAGIPYSVPAWSCQM 90 (397)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSC----SCHHHHHHHHTTCCTTSCEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCC----CHHHHHHHHHcCCCCCccEEEecC
Confidence 445667899999999999999999888654332221 124555666554 56777763
No 106
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=52.54 E-value=16 Score=33.17 Aligned_cols=55 Identities=20% Similarity=0.159 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCC----CeEEec
Q psy16095 106 SKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNK----PIVGVN 163 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~i----Pli~V~ 163 (241)
+....+++++|+++|++++|||.|.+...-+.+. -+-..+..++..+++ |.+.|+
T Consensus 28 ~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~---~~~~~a~~va~~lGl~~~~p~~~v~ 86 (401)
T 1ulq_A 28 DLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGE---DNRNVARMALLLAGFPVEVAGCTVN 86 (401)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSST---TTTTHHHHHHHHTTCCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCC---CCChHHHHHHHHhCCCCCccEeecc
Confidence 4456689999999999999999998865432211 012345566666655 456665
No 107
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=52.53 E-value=28 Score=28.29 Aligned_cols=48 Identities=13% Similarity=0.043 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEEec
Q psy16095 106 SKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVGVN 163 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~ 163 (241)
+.|..+|+++|+++|+. |++||--.--.--.+| ..+|..+++|+..++
T Consensus 24 ~~i~~ai~~aL~~~gl~---v~~lATid~K~dE~gL-------~e~A~~lgvPl~~~~ 71 (155)
T 3by5_A 24 DAIIAAVRAAERAFGVT---VDYLATAPLKADEAGL-------AEAAKGLSLSLEIVA 71 (155)
T ss_dssp HHHHHHHHHHHHHHTCC---CCEEEESSCCSCCHHH-------HHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHHHCCCC---eEEEEchhhhCCCHHH-------HHHHHHhCCCeEEEC
Confidence 44778999999999987 9999864332223344 457888999999986
No 108
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=51.93 E-value=11 Score=34.43 Aligned_cols=55 Identities=18% Similarity=0.047 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhh-CCCCcCCcCEEEEEcC-CCCCChhHHHHHHHHHHHHHhCC----CeEEec
Q psy16095 105 KSKVLEVLKEALDQ-AKVSRDDIDVICYTKG-PGMGGPLTVVAIVARTLALLWNK----PIVGVN 163 (241)
Q Consensus 105 ~e~L~~~I~~~L~~-agi~~~DID~IAvt~G-PGs~tgLRVG~s~Ak~LA~~l~i----Pli~V~ 163 (241)
.+....+++++|++ +|++++|||.|.+..- |.... +-+.++.++..++. |.+.|+
T Consensus 33 ~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~----~~~~a~~va~~lGlp~~~pa~~v~ 93 (407)
T 3svk_A 33 LNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQ----GGDIARTAVLAAGLPETTGGVQLN 93 (407)
T ss_dssp HHHHHHHHHHHHHHSTTCCGGGEEEEEEECC------------CHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccc----cCcHHHHHHHHcCCCCCCceEEec
Confidence 44556789999999 9999999999988543 21111 22345556666655 455554
No 109
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=51.73 E-value=17 Score=32.76 Aligned_cols=56 Identities=13% Similarity=0.125 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhC----CCeEEecc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWN----KPIVGVNH 164 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~----iPli~V~H 164 (241)
.+....+++++|+++|++++|||.+.+..--+.+.+ -..+..++..++ .|.+.|+.
T Consensus 33 ~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~----~~~a~~va~~lgl~~~~p~~~v~~ 92 (395)
T 2ib8_A 33 TKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEG----QAPTRQAVLGAGLPISTPCTTINK 92 (395)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSC----SCHHHHHHHHTTCCTTCCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCC----chHHHHHHHHcCCCCCceEEEecc
Confidence 345666899999999999999999887543222211 123445555554 47777764
No 110
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=51.58 E-value=14 Score=33.85 Aligned_cols=44 Identities=23% Similarity=0.306 Sum_probs=30.0
Q ss_pred HHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHH
Q psy16095 108 VLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLA 152 (241)
Q Consensus 108 L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA 152 (241)
...+++++|+++|++++|||.|- ..|.|...-.+.-.++.+.+.
T Consensus 295 ~~~ai~~al~~Agl~~~dId~ve-~HgtgT~~d~~e~~al~~~~g 338 (428)
T 3kzu_A 295 AQRCMVAALKRAGIVPDEIDYIN-AHGTSTMADTIELGAVERVVG 338 (428)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEE-CCCCSSTTHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHcCCCHHHeeEEE-ecCCcchhhHHHHHHHHHHhc
Confidence 44689999999999999999985 566666333433333334443
No 111
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=51.45 E-value=18 Score=31.54 Aligned_cols=31 Identities=19% Similarity=0.261 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcC
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKG 134 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~G 134 (241)
-.+....+.+++|+++|++++|||.|.+...
T Consensus 60 ~~~la~~Aa~~al~~ag~~~~~id~vi~gt~ 90 (339)
T 1mzj_A 60 IQVMGVAASRRALEHAGVDPAEIDLVVVSTM 90 (339)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 3455666899999999999999999887554
No 112
>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} SCOP: c.151.1.1 c.152.1.1
Probab=51.08 E-value=16 Score=33.15 Aligned_cols=47 Identities=17% Similarity=0.261 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEEec
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVGVN 163 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~ 163 (241)
.+.+..+|+++|+++|+.+.+|++|| |..- . ...+|..+++|+..++
T Consensus 222 ~~~i~~ai~~aL~~~~l~~~~v~~ia-sid~------K-----L~~~A~~l~~pl~~~~ 268 (336)
T 3eeq_A 222 MEEIRDGIYKVLERLNLKRERIGIIA-SIRE------E-----VKKIADEFNVRFRLVN 268 (336)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEE-ESCT------T-----HHHHHHHHTCEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCHHHhhEEE-cHHH------H-----HHHHHHHhCCCEEEeC
Confidence 35577899999999999999999999 4432 1 5678889999999987
No 113
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=50.76 E-value=13 Score=33.87 Aligned_cols=32 Identities=9% Similarity=0.163 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEE-cCCC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYT-KGPG 136 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt-~GPG 136 (241)
.+....+++++|+++|++++|||.|.+. .-|.
T Consensus 118 ~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~ 150 (392)
T 3led_A 118 AEMAVTAAEQAIERWGKPRERIGAVLCACSNMQ 150 (392)
T ss_dssp HHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC
Confidence 3445569999999999999999999984 3353
No 114
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=50.69 E-value=21 Score=32.09 Aligned_cols=29 Identities=10% Similarity=-0.015 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.+....+++++|+++|++++|||.|.+..
T Consensus 99 ~~La~~Aa~~aL~~ag~~~~~Id~li~~t 127 (387)
T 3a5r_A 99 AELGKEAALKAIKEWGQPKSKITHLIVCC 127 (387)
T ss_dssp HHHHHHHHHHHHHHHCSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 34455589999999999999999998743
No 115
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=49.35 E-value=13 Score=33.82 Aligned_cols=25 Identities=12% Similarity=0.100 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhhCCCCcCCcCEEEE
Q psy16095 107 KVLEVLKEALDQAKVSRDDIDVICY 131 (241)
Q Consensus 107 ~L~~~I~~~L~~agi~~~DID~IAv 131 (241)
....+++++|+++|++++|||.|-.
T Consensus 282 ~~~~ai~~al~~agl~~~dId~ve~ 306 (416)
T 1e5m_A 282 GATRAIAWALKDSGLKPEMVSYINA 306 (416)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEE
Confidence 3557899999999999999999875
No 116
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=49.33 E-value=29 Score=31.22 Aligned_cols=29 Identities=10% Similarity=0.016 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.+....+++++|+++|++++|||.|.+..
T Consensus 103 ~~La~~Aa~~aL~~agl~~~~Id~li~~t 131 (389)
T 1i88_A 103 PRLGKEAAVKAIKEWGQPKSKITHLIVCT 131 (389)
T ss_dssp HHHHHHHHHHHHHHHCSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEE
Confidence 34445589999999999999999998844
No 117
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=49.01 E-value=23 Score=32.14 Aligned_cols=56 Identities=18% Similarity=0.189 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhhCC----CCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCC----CeEEecc
Q psy16095 105 KSKVLEVLKEALDQAK----VSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNK----PIVGVNH 164 (241)
Q Consensus 105 ~e~L~~~I~~~L~~ag----i~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~i----Pli~V~H 164 (241)
.+....+++++|+++| ++++|||.|.+...-+.+. +-..+..++..+++ |.+.|+.
T Consensus 36 ~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~----~~~~a~~va~~lGl~~~~p~~~v~~ 99 (393)
T 1afw_A 36 DYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGA----GATEHRAACLASGIPYSTPFVALNR 99 (393)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGG----GHHHHHHHHHHTTCCTTSCEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCC----CChHHHHHHHHcCCCCCceEEEEcC
Confidence 3455668999999999 9999999988865422222 23456666666655 5666663
No 118
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=48.19 E-value=16 Score=32.18 Aligned_cols=27 Identities=26% Similarity=0.356 Sum_probs=22.7
Q ss_pred HHHHHHHHhhCCCCcCCcCEEEE-EcCC
Q psy16095 109 LEVLKEALDQAKVSRDDIDVICY-TKGP 135 (241)
Q Consensus 109 ~~~I~~~L~~agi~~~DID~IAv-t~GP 135 (241)
..+.+++|+++|++++|||.|.+ |.-|
T Consensus 67 ~~Aa~~aL~~ag~~~~dId~li~~t~t~ 94 (350)
T 4ewp_A 67 VGAAREALERAGLQGSDLDAVIVSTVTF 94 (350)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEEECSCC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccC
Confidence 45899999999999999998877 4444
No 119
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=48.02 E-value=19 Score=32.72 Aligned_cols=30 Identities=13% Similarity=0.185 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 103 HHKSKVLEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 103 ~H~e~L~~~I~~~L~~agi~~~DID~IAvt 132 (241)
...+.++.+++++|+++|++++|||.|.+-
T Consensus 204 ~~~~~~~~~~~~~L~~agl~~~did~~~~H 233 (396)
T 1xpm_A 204 AYIRSFQQSWNEYAKRQGKSLADFASLCFH 233 (396)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 345568889999999999999999999874
No 120
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=46.99 E-value=17 Score=33.02 Aligned_cols=24 Identities=25% Similarity=0.434 Sum_probs=21.2
Q ss_pred HHHHHHHHHhhCCCCcCCcCEEEE
Q psy16095 108 VLEVLKEALDQAKVSRDDIDVICY 131 (241)
Q Consensus 108 L~~~I~~~L~~agi~~~DID~IAv 131 (241)
...+++++|+++|++++|||.|-.
T Consensus 281 ~~~ai~~al~~Agl~~~dId~ve~ 304 (415)
T 1tqy_B 281 LERAIRLALNDAGTGPEDVDVVFA 304 (415)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred HHHHHHHHHHHcCCCHhHCCEEEE
Confidence 446899999999999999999875
No 121
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=46.94 E-value=60 Score=28.09 Aligned_cols=28 Identities=7% Similarity=-0.235 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhCCCeEEeccchhhhhh
Q psy16095 144 VAIVARTLALLWNKPIVGVNHCIGHIEM 171 (241)
Q Consensus 144 G~s~Ak~LA~~l~iPli~V~HleaHa~s 171 (241)
++.+++.|...+++|++-.|...+-+++
T Consensus 86 ~~~l~~~l~~~~~~pV~v~NDanaaala 113 (302)
T 3epq_A 86 HYPFLQTVXNEMXIPVGFSTDVNAAALG 113 (302)
T ss_dssp TCCHHHHHHHHHCSCEEEEEHHHHHHHH
T ss_pred CCChHHHHHHHhCCCEEEechhHHHHHH
Confidence 4566788888999999888876666554
No 122
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=46.86 E-value=25 Score=31.56 Aligned_cols=29 Identities=17% Similarity=0.224 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.+....+++++|+++|++++|||.|.+..
T Consensus 114 ~~la~~Aa~~aL~~agl~~~~Id~vi~~t 142 (393)
T 1ted_A 114 VPLAVDVSKRALAGLPYRAAEIGLLVLAT 142 (393)
T ss_dssp HHHHHHHHHHHHTTCCCCGGGEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEE
Confidence 34455589999999999999999998743
No 123
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=45.68 E-value=24 Score=31.57 Aligned_cols=30 Identities=47% Similarity=0.640 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKG 134 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~G 134 (241)
.+....+.+++|+++|++++|||.|.++..
T Consensus 85 ~~la~~Aa~~aL~~agl~~~~id~vi~~t~ 114 (382)
T 1u0m_A 85 KSRVPAVIQRALDDAELLATDIDVIIYVSC 114 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEEECS
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCEEEEEec
Confidence 344556899999999999999999988543
No 124
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=45.52 E-value=27 Score=31.85 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.+....+++++|+++|++++|||.|.++.
T Consensus 121 ~~La~~Aa~~aL~~agl~~~dId~li~~t 149 (413)
T 2p0u_A 121 PKLAKEASMNAIKEWGRPKSEITHIVMAT 149 (413)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCcCHHHCCEEEEEe
Confidence 34445589999999999999999998843
No 125
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=45.16 E-value=18 Score=33.43 Aligned_cols=26 Identities=19% Similarity=0.212 Sum_probs=22.5
Q ss_pred HHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 108 VLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 108 L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
...+++++|+++|++++|||.|.+..
T Consensus 141 a~~Aa~~AL~~agi~~~dId~li~~t 166 (413)
T 3v7i_A 141 GERAARGALQIAGLDVADVDCLITSN 166 (413)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHhCcCHHHCCEEEEEc
Confidence 34589999999999999999999854
No 126
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=45.08 E-value=20 Score=32.23 Aligned_cols=55 Identities=20% Similarity=0.210 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC----eEEec
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP----IVGVN 163 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP----li~V~ 163 (241)
.+....+++++|+++|++++|||.+.+..--+...+ -..+..++..++.+ .+.|+
T Consensus 28 ~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~----~~~a~~ia~~lgl~~~~p~~~v~ 86 (392)
T 2vu1_A 28 HELGATVISAVLERAGVAAGEVNEVILGQVLPAGEG----QNPARQAAMKAGVPQEATAWGMN 86 (392)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSC----SCHHHHHHHHTTCCTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCC----cHHHHHHHHHcCCCCCceEEEec
Confidence 445667899999999999999999887543332221 13455566666654 55555
No 127
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=44.96 E-value=27 Score=35.02 Aligned_cols=44 Identities=18% Similarity=0.132 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHH
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLA 152 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA 152 (241)
-.+.+..+++++|+++|++++|||.+..-.+ +.|+.-.+++.|.
T Consensus 862 ~~~~~~~~~~~al~~agl~~~did~~~~Hq~-----~~~i~~~~~~~lg 905 (979)
T 3tsy_A 862 ISENVEKCLTQAFDPLGISDWNSLFWIAHPG-----GPAILDAVEAKLN 905 (979)
T ss_dssp HHHHHHHHHHHHHGGGTCCCGGGSEEEECCS-----CHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCCCCcccceEEECCC-----ChHHHHHHHHHcC
Confidence 3455778999999999999999999987544 6777666666543
No 128
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=44.60 E-value=30 Score=31.59 Aligned_cols=29 Identities=14% Similarity=0.180 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.+....+++++|+++|++++|||.|.+..
T Consensus 126 ~~La~~Aa~~AL~~agl~~~~Id~li~~t 154 (413)
T 1xes_A 126 PRLAKEAAEKAIQEWGQSKSGITHLIFCS 154 (413)
T ss_dssp HHHHHHHHHHHHHHHCSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEE
Confidence 34445589999999999999999998743
No 129
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=44.29 E-value=9.1 Score=30.35 Aligned_cols=74 Identities=9% Similarity=0.003 Sum_probs=39.9
Q ss_pred chhhhhhhhhhhccccCCCcCCCCCeEEeeeeeec-----ccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcC
Q psy16095 53 SKVLEEKFDYLSQNQRGKGSIGKKNTILSNCRRTY-----VTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDID 127 (241)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~s~-----~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID 127 (241)
+|-.+-+++.-...-.....+..+++||...+... ..-++|++-|.+... ..+++++.++.|++...++
T Consensus 12 ~~~~~~~~~m~~~~~~~~~vi~~~~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~------~aa~REl~EEtGl~~~~~~ 85 (176)
T 3q93_A 12 SGLVPRGSHMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIE------DGARRELQEESGLTVDALH 85 (176)
T ss_dssp -----------CEEEEEEEEEECSSEEEEEEECSSTTTTSEECEEEECCTTSCHH------HHHHHHHHHHHSCEESCCE
T ss_pred CCCccCCCcCCCCcEEEEEEEEeCCEEEEEEEcCCCCCCeEECceecCCCCCCHH------HHHHHHHHHHHCCcceeeE
Confidence 34445555544433344445566778877654321 234556666654322 2588999999999998888
Q ss_pred EEEEE
Q psy16095 128 VICYT 132 (241)
Q Consensus 128 ~IAvt 132 (241)
.+...
T Consensus 86 ~l~~~ 90 (176)
T 3q93_A 86 KVGQI 90 (176)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77764
No 130
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=42.47 E-value=25 Score=32.53 Aligned_cols=28 Identities=14% Similarity=0.202 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 106 SKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
+....+++++|+++|++++|||.|.+..
T Consensus 54 ~La~~Aa~~aL~~agi~~~~Id~li~~t 81 (450)
T 2f82_A 54 SMSFNAVTSLLEKYKIDPKQIGRLEVGS 81 (450)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCcCHHHCCEEEEEe
Confidence 4445689999999999999999999754
No 131
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=42.41 E-value=35 Score=30.89 Aligned_cols=29 Identities=14% Similarity=0.160 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.+....+++++|+++|++++|||.|.+..
T Consensus 108 ~~La~~Aa~~aL~~agl~~~~Id~vi~~t 136 (402)
T 1ee0_A 108 PMLGKEAAVKAIDEWGLPKSKITHLIFCT 136 (402)
T ss_dssp HHHHHHHHHHHHHHHCSCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 34445589999999999999999998854
No 132
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=41.40 E-value=21 Score=32.11 Aligned_cols=56 Identities=13% Similarity=0.111 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhhC-CCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCC----CeEEec
Q psy16095 105 KSKVLEVLKEALDQA-KVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNK----PIVGVN 163 (241)
Q Consensus 105 ~e~L~~~I~~~L~~a-gi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~i----Pli~V~ 163 (241)
.+....+++++|+++ |++++|||.|.+...-+.+.. +-..+..++..++. |.+.|+
T Consensus 31 ~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~---~~~~a~~ia~~lgl~~~~p~~~v~ 91 (390)
T 1wdk_C 31 EDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQ---GWNIARMASLMTQIPHTSAAQTVS 91 (390)
T ss_dssp HHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTT---TTTHHHHHHTTSSSCTTSEEEEEE
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCC---CCcHHHHHHHHcCCCCCccEEEEc
Confidence 345667899999999 999999999888653322210 12355566666554 555554
No 133
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=41.04 E-value=32 Score=25.87 Aligned_cols=54 Identities=19% Similarity=0.168 Sum_probs=35.8
Q ss_pred CCCCCeEEeeeeeec-------ccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 73 IGKKNTILSNCRRTY-------VTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 73 ~~~~~~il~~~~~s~-------~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt 132 (241)
++.+++||...+... ..-++|++-+.+... ..+++++.++.|++....+.+.+.
T Consensus 16 ~~~~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~------~aa~REl~EE~Gl~~~~~~~~~~~ 76 (153)
T 3grn_A 16 RNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLK------EGVAREVWEETGITMVPGDIAGQV 76 (153)
T ss_dssp ECTTCCEEEEEECTTCSSSTTCEECSEEECCTTCCHH------HHHHHHHHHHHCCCCCCCSEEEEE
T ss_pred EcCCCcEEEEEEcCCCCCCCCeEECceeecCCCCCHH------HHHHhhhhhhhCcEeecceEEEEE
Confidence 345677887666532 234556666644332 257899999999998888877764
No 134
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=39.53 E-value=1.1e+02 Score=22.47 Aligned_cols=21 Identities=5% Similarity=0.216 Sum_probs=18.9
Q ss_pred eEEEEEeeCCCceeEEEEeCC
Q psy16095 2 VIAIGFEGSANKLGIGIVDTK 22 (241)
Q Consensus 2 ~~~~~~e~s~~~~~~~~~~~~ 22 (241)
|.+||||=--..+|||+-|..
T Consensus 1 mriLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSC
T ss_pred CcEEEEEeCCCEEEEEEEeCC
Confidence 569999999999999999874
No 135
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=39.52 E-value=63 Score=29.52 Aligned_cols=62 Identities=13% Similarity=0.031 Sum_probs=43.0
Q ss_pred CCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCe
Q psy16095 92 GEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPI 159 (241)
Q Consensus 92 ~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPl 159 (241)
+|.--|-.....-.......|++.|+++|++++|+|.|.-. . -=.+|..+.+.|...++.|+
T Consensus 193 ~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtg-d-----L~q~g~~il~~l~~~~g~~~ 254 (347)
T 3lma_A 193 LGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTG-D-----LSGVGSPILKDLLKEEGINV 254 (347)
T ss_dssp CSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEE-S-----CHHHHHHHHHHHHHHTTCCC
T ss_pred cCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecC-C-----hHHHHHHHHHHHHHHcCCCh
Confidence 44434444333333333356799999999999999999841 1 12678888899999999986
No 136
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=37.32 E-value=19 Score=32.86 Aligned_cols=30 Identities=23% Similarity=0.337 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhhCCCCcCCcCEEEEEcCCCC
Q psy16095 107 KVLEVLKEALDQAKVSRDDIDVICYTKGPGM 137 (241)
Q Consensus 107 ~L~~~I~~~L~~agi~~~DID~IAvt~GPGs 137 (241)
....+++++|+++|++++|||.|-. .|.|.
T Consensus 286 ~~~~ai~~al~~agl~~~dId~ve~-HgtgT 315 (416)
T 2wge_A 286 RAGRAMTRSLELAGLSPADIDHVNA-HGTAT 315 (416)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEC-CCCCC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-CCCCC
Confidence 4556899999999999999998874 45444
No 137
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=37.01 E-value=2e+02 Score=24.70 Aligned_cols=53 Identities=13% Similarity=0.117 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEEec
Q psy16095 106 SKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVGVN 163 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~ 163 (241)
..+...+..+++..++++.+|+.|+++.= .-.+--.+.+.+...++++.+-|+
T Consensus 37 de~~~~l~~ll~~~~~~~~~i~~iiISSV-----vp~~~~~l~~~~~~~~~~~~~~v~ 89 (268)
T 2h3g_X 37 DEYGMLVKQLLEHEGLSFEDVKGIIVSSV-----VPPIMFALERMCEKYFKIKPLVVG 89 (268)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEEES-----CHHHHHHHHHHHHHHTCCCCEECS
T ss_pred HHHHHHHHHHHHHcCCCcccCcEEEEEcc-----ChhHHHHHHHHHHHHhCCCeEEEc
Confidence 34556788889999999899999888532 123334445555566787766654
No 138
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=36.91 E-value=39 Score=30.52 Aligned_cols=29 Identities=10% Similarity=0.169 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.+....+++++|+++|++++|||.|.++.
T Consensus 116 ~~La~~Aa~~aL~~ag~~~~~Id~vi~~t 144 (406)
T 2d3m_A 116 PALGTEAAVKAIEEWGRPKSEITHLVFCT 144 (406)
T ss_dssp HHHHHHHHHHHHHHHCSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 34445589999999999999999998854
No 139
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=36.89 E-value=52 Score=28.02 Aligned_cols=46 Identities=11% Similarity=0.131 Sum_probs=25.1
Q ss_pred CCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhC--CCeEEeccchhhhhhc
Q psy16095 124 DDIDVICYTKGPGMGGPLTVVAIVARTLALLWN--KPIVGVNHCIGHIEMG 172 (241)
Q Consensus 124 ~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~--iPli~V~HleaHa~sa 172 (241)
.+++.|+++ -||.. -..+..+.+.|...++ +|+.-.|...+-++..
T Consensus 56 ~~i~~igig-~pG~~--~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge 103 (291)
T 1zxo_A 56 GKFNAVYFY-GAGCT--PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGL 103 (291)
T ss_dssp -----CEEE-CTTCC--TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHT
T ss_pred ccccEEEEE-cCCCC--HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhh
Confidence 467777774 34432 1112356667777888 5988888877766544
No 140
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=36.42 E-value=36 Score=25.44 Aligned_cols=54 Identities=13% Similarity=0.117 Sum_probs=36.8
Q ss_pred CCCCCeEEeeeeeec----ccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 73 IGKKNTILSNCRRTY----VTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 73 ~~~~~~il~~~~~s~----~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt 132 (241)
++.++++|...+... ..-++|++-+.+...+ .+++++.++.|++.+.++.+.+.
T Consensus 12 i~~~~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~------aa~REl~EEtGl~~~~~~~~~~~ 69 (153)
T 3shd_A 12 VHAEGKFLVVEETINGKALWNQPAGHLEADETLVE------AAARELWEETGISAQPQHFIRMH 69 (153)
T ss_dssp EEETTEEEEEEEEETTEEEEECSEEECCTTCCHHH------HHHHHHHHHHCCCCCCCEEEEEE
T ss_pred EEeCCEEEEEEecCCCCCCEECCeEEeCCCCCHHH------HHHHHHHHHHCcccccCcEEEEE
Confidence 334577777665321 2466777877554332 58899999999998888877764
No 141
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=36.26 E-value=26 Score=32.50 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 102 QHHKSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 102 r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
+...+.++.+++++|+++|++++|||.+.+-.
T Consensus 237 ~~~~~~l~~~~~~~l~~~gl~~~Did~~v~Hq 268 (425)
T 3sqz_A 237 KQYLDMLKTTWAEYQKRFDVSLTDFAAFCFHL 268 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCCEEEECC
Confidence 35567788899999999999999999998744
No 142
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=35.74 E-value=23 Score=32.59 Aligned_cols=28 Identities=18% Similarity=0.251 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhhCCCCcCCcCEEEEEcCC
Q psy16095 107 KVLEVLKEALDQAKVSRDDIDVICYTKGP 135 (241)
Q Consensus 107 ~L~~~I~~~L~~agi~~~DID~IAvt~GP 135 (241)
....+++++|+++|++++|||.|-.- |.
T Consensus 303 ~~~~ai~~al~~Agl~~~dId~ve~H-gt 330 (434)
T 2gp6_A 303 RAGHAITRAIQLAGLAPGDIDHVNAH-AT 330 (434)
T ss_dssp HHHHHHHHHHHHTTCCTTTEEEEECC-CC
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEEe-CC
Confidence 45568999999999999999999876 53
No 143
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=35.31 E-value=28 Score=31.65 Aligned_cols=31 Identities=13% Similarity=0.166 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 103 HHKSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 103 ~H~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
...+.++.+++++|+++|++++|||.+.+-.
T Consensus 209 ~~~~~~~~~~~~~l~~~g~~~~did~~v~Hq 239 (388)
T 3v4n_A 209 TYIQSFAQVWDEHKKRTGLDFADYDALAFHI 239 (388)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCCEEEeCC
Confidence 4467788899999999999999999998643
No 144
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=34.81 E-value=34 Score=30.48 Aligned_cols=54 Identities=11% Similarity=0.187 Sum_probs=40.9
Q ss_pred hhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC
Q psy16095 99 ETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP 158 (241)
Q Consensus 99 ~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP 158 (241)
...+...+.+..+|+++|++++++..+||.|-.+-|-...++++ +.|...++.+
T Consensus 318 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~------~~l~~~f~~~ 371 (409)
T 4gni_A 318 TIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIA------ANFRYIFPES 371 (409)
T ss_dssp HHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHH------HHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHH------HHHHHHcCCc
Confidence 34455677888899999999999999999999987755555543 4466667765
No 145
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=33.96 E-value=20 Score=32.51 Aligned_cols=24 Identities=25% Similarity=0.391 Sum_probs=21.7
Q ss_pred HHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 109 LEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 109 ~~~I~~~L~~agi~~~DID~IAvt 132 (241)
..+++++|+++|++++|||.|=+.
T Consensus 299 ~~a~~~al~~Agl~~~dId~ie~h 322 (401)
T 1ulq_A 299 VPATRKALERAGLSFSDLGLIELN 322 (401)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEe
Confidence 468999999999999999999875
No 146
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=33.91 E-value=21 Score=32.38 Aligned_cols=27 Identities=22% Similarity=0.313 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEE
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICY 131 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAv 131 (241)
.+....+++++|+++|++++|||.|-.
T Consensus 278 ~~~~~~ai~~Al~~Agl~~~dId~ve~ 304 (412)
T 4ewg_A 278 ASTMARAMQLALEDAKLDANAIAYVNA 304 (412)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEc
Confidence 345667999999999999999999875
No 147
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=33.43 E-value=22 Score=27.03 Aligned_cols=56 Identities=16% Similarity=0.144 Sum_probs=37.3
Q ss_pred CCCCCeEEeeeeee-cccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcC
Q psy16095 73 IGKKNTILSNCRRT-YVTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKG 134 (241)
Q Consensus 73 ~~~~~~il~~~~~s-~~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~G 134 (241)
++++++||...+.. ++.-++|.+-|.+... ..+++++.++.|++...++.+++...
T Consensus 29 ~~~~~~vLL~~r~~~~w~lPgG~ve~gEs~~------~aa~REl~EEtGl~~~~~~~~~~~~~ 85 (153)
T 3eds_A 29 KNEQGEILFQYPGGEYWSLPAGAIELGETPE------EAVVREVWEETGLKVQVKKQKGVFGG 85 (153)
T ss_dssp BCTTCCEEEECC---CBBCSEEECCTTSCHH------HHHHHHHHHHHCEEEEEEEEEEEECS
T ss_pred EcCCCeEEEEEcCCCcEECCccccCCCCCHH------HHHHHHHHHHHCccceeeeEEEEecc
Confidence 45567888765541 2346677777755332 25889999999999887777776543
No 148
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=33.39 E-value=51 Score=29.76 Aligned_cols=45 Identities=11% Similarity=0.042 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCE----EEEEcCCCCCChhHHHHHHHHHHHHHhCCC
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDV----ICYTKGPGMGGPLTVVAIVARTLALLWNKP 158 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~----IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP 158 (241)
-.+.++.+++++|+++|++++ ||. +.+-.+ +.|+--.++ ..+++|
T Consensus 288 ~~~~~~~~i~~~L~~agl~~~-id~~di~~v~Hq~-----~~~i~~~~~----~~lgl~ 336 (406)
T 2d3m_A 288 ISNNVEACLIDVFKSVGITPP-EDWNSLFWIPHPG-----GRAILDQVE----AKLKLR 336 (406)
T ss_dssp HHHHHHHHHHHHHHTTTCCCC-SSGGGSEEEECCS-----CHHHHHHHH----HHTTCC
T ss_pred HHHHHHHHHHHHHHhcCCCCC-CCccceEEEECCC-----CHHHHHHHH----HHcCCC
Confidence 355688899999999999988 888 777544 556554444 455655
No 149
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=33.08 E-value=31 Score=25.45 Aligned_cols=55 Identities=15% Similarity=0.090 Sum_probs=35.3
Q ss_pred CCCe--EEeeeeeec---ccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCC
Q psy16095 75 KKNT--ILSNCRRTY---VTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGP 135 (241)
Q Consensus 75 ~~~~--il~~~~~s~---~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GP 135 (241)
++++ +|...+... ..-++|++-|.+... ..+++++.++.|++...++.+.+...|
T Consensus 21 ~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~------~aa~RE~~EEtGl~~~~~~~~~~~~~~ 80 (139)
T 2yyh_A 21 GENFKGIVLIERKYPPVGLALPGGFVEVGERVE------EAAAREMREETGLEVRLHKLMGVYSDP 80 (139)
T ss_dssp TTEEEEEEEEEECSSSCSEECCEEECCTTCCHH------HHHHHHHHHHHCCCCEEEEEEEEECCT
T ss_pred CCCcEEEEEEEecCCCCcEECccccCCCCCCHH------HHHHHHHHHHHCCCcccceEEEEECCC
Confidence 3455 666554432 235667777755332 258999999999998777766665444
No 150
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=32.89 E-value=46 Score=31.25 Aligned_cols=45 Identities=13% Similarity=0.102 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHhh-------CCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCe
Q psy16095 105 KSKVLEVLKEALDQ-------AKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPI 159 (241)
Q Consensus 105 ~e~L~~~I~~~L~~-------agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPl 159 (241)
.++++.+++++|++ +|++++|||.+ +-.+ +.||=-.+++ .+++|-
T Consensus 292 ~~~v~~~i~~~L~~~g~~L~~agl~~~DId~~-~Hqa-----n~rIl~~v~~----~Lgl~~ 343 (465)
T 3e1h_A 292 KASLQPTYADLLSSLQDQLPSSYQKPADFDWA-MHPG-----GATILSGAES----AMGLTP 343 (465)
T ss_dssp HHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-ECCS-----SHHHHHHHHH----HHTCCG
T ss_pred HHHHHHHHHHHHHhccccccccCCCHHHceEE-ecCC-----ChHHHHHHHH----HhCcCH
Confidence 45677788888887 67999999976 5444 5665544444 556654
No 151
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=32.16 E-value=23 Score=32.00 Aligned_cols=29 Identities=28% Similarity=0.420 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhhCCCCcCCcCEEEEEcCCC
Q psy16095 107 KVLEVLKEALDQAKVSRDDIDVICYTKGPG 136 (241)
Q Consensus 107 ~L~~~I~~~L~~agi~~~DID~IAvt~GPG 136 (241)
....+++++|+++|++++|||.|-. -|.|
T Consensus 278 ~~~~a~~~al~~agl~~~dId~ve~-Hgtg 306 (413)
T 3o04_A 278 GAARAMKMAIDDAGLTPDKVDYINA-HGTS 306 (413)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEC-CCCC
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEE-eCCc
Confidence 3457899999999999999999864 3443
No 152
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=32.00 E-value=25 Score=33.02 Aligned_cols=30 Identities=17% Similarity=0.226 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKG 134 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~G 134 (241)
.+....+.+++|+++|++++|||.|.+..-
T Consensus 74 ~~La~~Aa~~aL~~agi~~~dId~li~~T~ 103 (478)
T 2p8u_A 74 NSLCMTVVQNLMERNNLSYDCIGRLEVGTE 103 (478)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEEECS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcc
Confidence 344556999999999999999999998643
No 153
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=31.76 E-value=24 Score=31.82 Aligned_cols=29 Identities=17% Similarity=0.274 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhhCCCCcCCcCEEEEEcCCC
Q psy16095 107 KVLEVLKEALDQAKVSRDDIDVICYTKGPG 136 (241)
Q Consensus 107 ~L~~~I~~~L~~agi~~~DID~IAvt~GPG 136 (241)
....+++++|+++|++++|||.|-. .|.|
T Consensus 276 ~~~~ai~~al~~Agl~~~dId~ve~-Hgtg 304 (408)
T 1j3n_A 276 GAALAMARALKDAGIAPEQVGYINA-HGTS 304 (408)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEC-CCCS
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEE-eCCc
Confidence 3456899999999999999998874 4443
No 154
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=31.72 E-value=19 Score=32.63 Aligned_cols=24 Identities=17% Similarity=0.292 Sum_probs=21.6
Q ss_pred HHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 109 LEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 109 ~~~I~~~L~~agi~~~DID~IAvt 132 (241)
..+++++|+++|++++|||.|=+.
T Consensus 296 ~~a~~~al~~Agl~~~dId~ve~h 319 (393)
T 1afw_A 296 AYAIPKVLEATGLQVQDIDIFEIN 319 (393)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEe
Confidence 468999999999999999999864
No 155
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=31.27 E-value=20 Score=32.32 Aligned_cols=24 Identities=21% Similarity=0.331 Sum_probs=21.6
Q ss_pred HHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 109 LEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 109 ~~~I~~~L~~agi~~~DID~IAvt 132 (241)
..+++++|+++|++++|||.|-+.
T Consensus 293 ~~a~~~al~~agl~~~dId~ie~~ 316 (392)
T 2vu1_A 293 IPASRKALERAGWKIGDLDLVEAN 316 (392)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHcCCCHHHcCEEEec
Confidence 468999999999999999999964
No 156
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=31.17 E-value=25 Score=32.47 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=22.1
Q ss_pred HHHHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 107 KVLEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 107 ~L~~~I~~~L~~agi~~~DID~IAvt 132 (241)
....+++++|+++|++++|||.|-.-
T Consensus 309 ~~~~ai~~al~~Agl~~~dId~ve~H 334 (451)
T 4ddo_A 309 GAMRAMKLALRMGDVAPEQVDYVNAH 334 (451)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEec
Confidence 34578999999999999999998753
No 157
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=31.14 E-value=78 Score=29.18 Aligned_cols=44 Identities=14% Similarity=0.035 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHh------hCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHH
Q psy16095 104 HKSKVLEVLKEALD------QAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLA 152 (241)
Q Consensus 104 H~e~L~~~I~~~L~------~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA 152 (241)
..+.++.+++.+|+ ++|++++|||.+.+-.. +.++.-..++.|.
T Consensus 212 ~~~~l~~~~~~~l~~~~~~~~agl~~~did~~v~Hq~-----~~~i~~~~~~~L~ 261 (450)
T 2f82_A 212 YLMALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSP-----YNKLVQKSFARLL 261 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCCGGGCSEEEECCS-----SHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccccCCChhhcCEEEecCC-----hHHHHHHHHHHhc
Confidence 34567778888886 89999999999998654 7777777777776
No 158
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=31.02 E-value=25 Score=32.29 Aligned_cols=29 Identities=17% Similarity=0.317 Sum_probs=23.6
Q ss_pred HHHHHHHHHHhhCCCCcCCcCEEEEEcCCC
Q psy16095 107 KVLEVLKEALDQAKVSRDDIDVICYTKGPG 136 (241)
Q Consensus 107 ~L~~~I~~~L~~agi~~~DID~IAvt~GPG 136 (241)
....+++++|+++|++++|||.|-. .|.|
T Consensus 302 ~~~~ai~~Al~~Agl~p~dId~ve~-Hgtg 330 (437)
T 2gqd_A 302 GGSRAMQAAMDDAGIEPKDVQYLNA-HGTS 330 (437)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEC-CCCS
T ss_pred HHHHHHHHHHHHcCCCHhhCCEEEE-ECCC
Confidence 4456899999999999999999874 4444
No 159
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=30.96 E-value=24 Score=31.84 Aligned_cols=23 Identities=35% Similarity=0.472 Sum_probs=21.0
Q ss_pred HHHHHHHHhhCCCCcCCcCEEEE
Q psy16095 109 LEVLKEALDQAKVSRDDIDVICY 131 (241)
Q Consensus 109 ~~~I~~~L~~agi~~~DID~IAv 131 (241)
..+++++|+++|++++|||.|-+
T Consensus 297 ~~ai~~al~~agl~~~dId~ve~ 319 (395)
T 4e1l_A 297 IPATRKALKKAGLSINDIDLIEA 319 (395)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEE
T ss_pred HHHHHHHHHHcCCCHHHcCEEEe
Confidence 36899999999999999999986
No 160
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=30.45 E-value=34 Score=25.61 Aligned_cols=54 Identities=13% Similarity=0.148 Sum_probs=34.6
Q ss_pred CCCCCeEEeeeeee---------cccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 73 IGKKNTILSNCRRT---------YVTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 73 ~~~~~~il~~~~~s---------~~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt 132 (241)
+++++++|...+.. +..-++|++-+.+... ..+++++.++.|++...++.+...
T Consensus 21 ~~~~~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~------~aa~RE~~EEtGl~~~~~~~l~~~ 83 (159)
T 1sjy_A 21 LNERGDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQ------DAAVREACEETGLRVRPVKFLGAY 83 (159)
T ss_dssp BCTTCCEEEEEESCC----CCCCCEECSEEECCTTSCHH------HHHHHHHHHHHSCCEEEEEEEEEE
T ss_pred EeCCCCEEEEEecccCcCCCCCCeEECCccccCCCCCHH------HHHHHHHHHHHCccceeeEEEEEE
Confidence 34567777666553 1235566776644322 258899999999998777666543
No 161
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=30.43 E-value=56 Score=29.37 Aligned_cols=45 Identities=13% Similarity=0.088 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHhh-------CCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCe
Q psy16095 105 KSKVLEVLKEALDQ-------AKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPI 159 (241)
Q Consensus 105 ~e~L~~~I~~~L~~-------agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPl 159 (241)
.++++++++++|++ +|++++|||.+ +-.+ +.|+=-.++ ..+++|-
T Consensus 263 ~~~~~~~i~~~L~~~~~~l~~~gl~~~did~~-~Hq~-----n~~il~~v~----~~Lgl~~ 314 (379)
T 3euo_A 263 KASLQPTYADLLSSLQDQLPSSYQKPADFDWA-MHPG-----GATILSGAE----SAMGLTP 314 (379)
T ss_dssp HHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-ECCS-----SHHHHHHHH----HHHTCCG
T ss_pred HHHHHHHHHHHHHhcCcccccccCChhHeeEE-eCCC-----ChHHHHHHH----HHhCCCH
Confidence 45677788888886 58999999965 5444 555544444 4556653
No 162
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=30.36 E-value=21 Score=32.20 Aligned_cols=24 Identities=29% Similarity=0.393 Sum_probs=21.3
Q ss_pred HHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 109 LEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 109 ~~~I~~~L~~agi~~~DID~IAvt 132 (241)
..+++++|+++|++++|||.|=+.
T Consensus 288 ~~a~~~al~~Agl~~~dId~ve~~ 311 (390)
T 1wdk_C 288 VPATQKALKRAGLNMADIDFIELN 311 (390)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEC
T ss_pred HHHHHHHHHHcCCChhhCcEEEec
Confidence 468999999999999999999853
No 163
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=30.28 E-value=26 Score=32.17 Aligned_cols=29 Identities=24% Similarity=0.323 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhhCCCCcCCcCEEEEEcCCC
Q psy16095 107 KVLEVLKEALDQAKVSRDDIDVICYTKGPG 136 (241)
Q Consensus 107 ~L~~~I~~~L~~agi~~~DID~IAvt~GPG 136 (241)
....+++++|+++|++++|||.|-. .|.|
T Consensus 302 ~~~~ai~~Al~~Agl~p~dId~ve~-Hgtg 330 (438)
T 2iwz_A 302 GALRCMAAALKDAGVQPEEISYINA-HATS 330 (438)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEC-CCCS
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEe-cCCC
Confidence 3556899999999999999999875 3433
No 164
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=30.23 E-value=23 Score=32.39 Aligned_cols=60 Identities=17% Similarity=0.302 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCC--CeEEeccchhhhh
Q psy16095 107 KVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNK--PIVGVNHCIGHIE 170 (241)
Q Consensus 107 ~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~i--Pli~V~HleaHa~ 170 (241)
....+++++|+++|++++|||.|-. .|.|...+= ..-+++|...++. |+-.+-.+.+|..
T Consensus 297 ~~~~ai~~al~~Agl~~~dId~ve~-Hgtgt~~~D---~~E~~al~~~~g~~~~v~s~k~~~GH~~ 358 (430)
T 1ox0_A 297 GAIKAIKLALEEAEISPEQVAYVNA-HGTSTPANE---KGESGAIVAVLGKEVPVSSTKSFTGHLL 358 (430)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCCEEC-CCCSCHHHH---HHHHHHHHHHHCSSSEEECTHHHHCBCG
T ss_pred HHHHHHHHHHHHhCcCHHHcCEEEE-eCCcCcccC---HHHHHHHHHHhCCCceecccccccccch
Confidence 4456899999999999999999875 343332221 1122445555553 3323323445554
No 165
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=30.23 E-value=26 Score=31.78 Aligned_cols=25 Identities=32% Similarity=0.502 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhhCCCCcCCcCEEEE
Q psy16095 107 KVLEVLKEALDQAKVSRDDIDVICY 131 (241)
Q Consensus 107 ~L~~~I~~~L~~agi~~~DID~IAv 131 (241)
....+++++|+++|++++|||.|-.
T Consensus 284 ~~~~ai~~al~~agl~~~dId~ve~ 308 (424)
T 1tqy_A 284 EMAETIRVALDESRTDATDIDYINA 308 (424)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 4557899999999999999999875
No 166
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=30.22 E-value=26 Score=32.02 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhhCCCCcCCcCEEEEEcCCC
Q psy16095 106 SKVLEVLKEALDQAKVSRDDIDVICYTKGPG 136 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID~IAvt~GPG 136 (241)
+....+++++|+++|++++|||.|-. .|.|
T Consensus 294 ~~~~~ai~~al~~agl~~~dId~ve~-Hgtg 323 (431)
T 2ix4_A 294 KGAVLAMTRALRQSGLCPNQIDYVNA-HATS 323 (431)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEC-CCCS
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEE-eCCc
Confidence 34556899999999999999998864 4544
No 167
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=30.17 E-value=47 Score=30.66 Aligned_cols=57 Identities=19% Similarity=0.146 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHhhCCCCcCCcCEEEE-----EcCCCCCChhHHHHHHHHHHHHHhCCCeEE
Q psy16095 103 HHKSKVLEVLKEALDQAKVSRDDIDVICY-----TKGPGMGGPLTVVAIVARTLALLWNKPIVG 161 (241)
Q Consensus 103 ~H~e~L~~~I~~~L~~agi~~~DID~IAv-----t~GPGs~tgLRVG~s~Ak~LA~~l~iPli~ 161 (241)
.-.+.+-.+++++|++++++++|||+|+. ---|..-..+-+| -...||...++|+|.
T Consensus 65 ~lg~~~a~av~~~l~~~~~~~~~Id~IGsHGQTv~H~P~~~~TlQiG--d~~~iA~~Tgi~vV~ 126 (371)
T 3qbx_A 65 RWVALAAQGVRELLLQQQMSPDEVRAIGSHGQTIRHEPARHFTVQIG--NPALLAELTGIDVVA 126 (371)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCCEEEECCEEEEEEGGGTEEEEEC--CHHHHHHHHSSCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccEEEeCCccCccCCCCCCeeecC--CHHHHHHHHCcCEEe
Confidence 33455667899999999999999999995 2244311112222 234477777776654
No 168
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=30.14 E-value=50 Score=24.91 Aligned_cols=53 Identities=17% Similarity=0.172 Sum_probs=33.6
Q ss_pred cCCCCCeEEeeeeeec------ccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEE
Q psy16095 72 SIGKKNTILSNCRRTY------VTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVIC 130 (241)
Q Consensus 72 ~~~~~~~il~~~~~s~------~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IA 130 (241)
.++.+++||...+... ..-++|++-|.+... ..+++++.++.|+.....+...
T Consensus 36 i~~~~~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~------~aa~RE~~EEtGl~~~~~~~~~ 94 (158)
T 3hhj_A 36 LLDQDNRVLLTQRPEGKSLAGLWEFPGGKVEQGETPE------ASLIRELEEELGVHVQADNLFP 94 (158)
T ss_dssp EBCTTSEEEEEECCCTTSCCCCCBCCEEECCTTCCHH------HHHHHHHHHHHCCBCCGGGCEE
T ss_pred EEeCCCEEEEEEeCCCCCCCCEEECCceeecCCCCHH------HHHHHHHHHHhCcEeecceEEE
Confidence 3455678887766532 234556666655332 2578899999999877765433
No 169
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=29.91 E-value=21 Score=32.21 Aligned_cols=24 Identities=25% Similarity=0.426 Sum_probs=21.4
Q ss_pred HHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 109 LEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 109 ~~~I~~~L~~agi~~~DID~IAvt 132 (241)
..+++++|+++|++++|||.|-+.
T Consensus 298 ~~a~~~al~~Agl~~~dId~ie~~ 321 (397)
T 1wl4_A 298 IPAIKQAVTKAGWSLEDVDIFEIN 321 (397)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEe
Confidence 468999999999999999999853
No 170
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=29.36 E-value=28 Score=31.77 Aligned_cols=63 Identities=13% Similarity=0.090 Sum_probs=36.3
Q ss_pred HHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChh-HHHHHHHHHHHHH-hCCCeEEeccchhhhhh
Q psy16095 108 VLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPL-TVVAIVARTLALL-WNKPIVGVNHCIGHIEM 171 (241)
Q Consensus 108 L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgL-RVG~s~Ak~LA~~-l~iPli~V~HleaHa~s 171 (241)
...+++++|+++|++++|||.|-. .|.|.-.+- ....++.+.+... ..+++-++-...+|...
T Consensus 294 ~~~ai~~al~~Agl~~~dId~ve~-HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~g 358 (427)
T 3ho9_A 294 AALAMANALRDAGIEASQIGYVNA-HGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLG 358 (427)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEC-CCCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGG
T ss_pred HHHHHHHHHHHcCCCHHHccEEEe-cCCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHH
Confidence 446899999999999999999875 465543332 2222233333321 12344444444566543
No 171
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=29.29 E-value=82 Score=28.13 Aligned_cols=46 Identities=15% Similarity=0.143 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHhhCCCC-cCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCe
Q psy16095 104 HKSKVLEVLKEALDQAKVS-RDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPI 159 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~-~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPl 159 (241)
-.+.++..++++|+++|++ ++|| .+.+-.+ +.|+--.+++ .+++|-
T Consensus 275 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~-----~~~i~~~~~~----~lgl~~ 321 (389)
T 1i88_A 275 VSKNITKALVEAFEPLGISDYNSI-FWIAHPG-----GPAILDQVEQ----KLALKP 321 (389)
T ss_dssp HHHHHHHHHHHHHGGGTCCCTTSS-EEEECCS-----CHHHHHHHHH----HHTCCG
T ss_pred HHHHHHHHHHHHHHhcCCCchhhc-eEEECCC-----cHHHHHHHHH----HcCCCH
Confidence 4566888999999999998 7777 6766554 5665544444 456653
No 172
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=28.65 E-value=20 Score=32.30 Aligned_cols=23 Identities=13% Similarity=0.176 Sum_probs=20.9
Q ss_pred HHHHHHHHhhCCCCcCCcCEEEE
Q psy16095 109 LEVLKEALDQAKVSRDDIDVICY 131 (241)
Q Consensus 109 ~~~I~~~L~~agi~~~DID~IAv 131 (241)
..+++++|+++|++++|||.|=+
T Consensus 298 ~~a~~~al~~Agl~~~dId~ie~ 320 (395)
T 2ib8_A 298 VYAASMVLKDVGLKKEDIAMWEV 320 (395)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEE
T ss_pred HHHHHHHHHHcCCCHHHcCEEEE
Confidence 45899999999999999999985
No 173
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=28.45 E-value=1.3e+02 Score=27.11 Aligned_cols=29 Identities=14% Similarity=0.255 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHhhCCCCcCCcC----EEEEEcC
Q psy16095 106 SKVLEVLKEALDQAKVSRDDID----VICYTKG 134 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID----~IAvt~G 134 (241)
+.+..+..++|+++|+++++|| .|.+..+
T Consensus 79 ~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~ 111 (416)
T 1e5m_A 79 HFAVCASQQAINDAKLVINELNADEIGVLIGTG 111 (416)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECS
T ss_pred HHHHHHHHHHHHHcCCChhhcCccceEEEEeec
Confidence 4556689999999999999999 5666544
No 174
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=28.33 E-value=25 Score=31.68 Aligned_cols=23 Identities=17% Similarity=0.349 Sum_probs=21.1
Q ss_pred HHHHHHHHhhCCCCcCCcCEEEE
Q psy16095 109 LEVLKEALDQAKVSRDDIDVICY 131 (241)
Q Consensus 109 ~~~I~~~L~~agi~~~DID~IAv 131 (241)
..+++++|+++|++++|||.|-+
T Consensus 295 ~~a~~~al~~agl~~~dId~ve~ 317 (394)
T 3ss6_A 295 APAIRKGLEKVDWSLEDADLLEI 317 (394)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEE
T ss_pred HHHHHHHHHHcCCCHHHcCEEEe
Confidence 46889999999999999999995
No 175
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=28.28 E-value=27 Score=32.40 Aligned_cols=23 Identities=26% Similarity=0.345 Sum_probs=21.0
Q ss_pred HHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 110 EVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 110 ~~I~~~L~~agi~~~DID~IAvt 132 (241)
.+++++|+++|++++|||.|=+.
T Consensus 319 ~A~~~Al~~AGl~~~DId~iE~h 341 (442)
T 2wu9_A 319 VAIPAAVKAAGLELDDIDLFEIN 341 (442)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEC
T ss_pred HHHHHHHHHcCCCHHHCCEEEEe
Confidence 68999999999999999999864
No 176
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=28.26 E-value=31 Score=25.93 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=25.2
Q ss_pred CCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEE
Q psy16095 90 PPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICY 131 (241)
Q Consensus 90 ~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAv 131 (241)
-++|++-|-+...+ .+++++.++.|++...++.++.
T Consensus 29 ~PgG~ve~gEt~~~------aa~RE~~EEtGl~~~~~~~l~~ 64 (134)
T 3i7u_A 29 FPKGNIEPGEKPEE------TAVREVWEETGVKGEILDYIGE 64 (134)
T ss_dssp CCEEECCTTCCHHH------HHHHHHHHHHSEEEEEEEEEEE
T ss_pred CCeeEecCCCCHHH------HHHHHHHHhcCceEEEeeeeee
Confidence 46677776554332 5899999999998766666554
No 177
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=28.09 E-value=24 Score=32.22 Aligned_cols=23 Identities=30% Similarity=0.481 Sum_probs=21.2
Q ss_pred HHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 110 EVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 110 ~~I~~~L~~agi~~~DID~IAvt 132 (241)
.+++++|+++|++++|||.|-+.
T Consensus 309 ~a~~~al~~Agl~~~dId~~e~h 331 (407)
T 3svk_A 309 PATRKVLDRAGLTIDDIDLFELN 331 (407)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHcCCCHHHCCEEEEe
Confidence 58999999999999999999874
No 178
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=27.81 E-value=1.4e+02 Score=27.10 Aligned_cols=30 Identities=13% Similarity=0.220 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcC----EEEEEcC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDID----VICYTKG 134 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID----~IAvt~G 134 (241)
.+.+..+..++|+++|+++++|| .|.+..+
T Consensus 99 ~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~ 132 (437)
T 2gqd_A 99 TQYAIVAAREAVKDAQLDINENTADRIGVWIGSG 132 (437)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECS
T ss_pred HHHHHHHHHHHHHHcCCCccccCCcceEEEEeec
Confidence 45566789999999999999999 7777654
No 179
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=27.75 E-value=26 Score=31.59 Aligned_cols=24 Identities=38% Similarity=0.396 Sum_probs=21.6
Q ss_pred HHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 109 LEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 109 ~~~I~~~L~~agi~~~DID~IAvt 132 (241)
..+++++|+++|++++|||.|-+.
T Consensus 285 ~~a~~~al~~agl~~~did~ve~h 308 (387)
T 3goa_A 285 VPASKLALKKAGLSASDIDVFEMN 308 (387)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEe
Confidence 468999999999999999999864
No 180
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=27.40 E-value=78 Score=28.24 Aligned_cols=45 Identities=9% Similarity=0.111 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHhhCCCC-cCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC
Q psy16095 104 HKSKVLEVLKEALDQAKVS-RDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP 158 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~-~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP 158 (241)
-.+.++..++++|+++|++ ++|| .+++-.+ +.|+--. ++..+++|
T Consensus 271 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~-----~~~i~~~----~~~~lgl~ 316 (387)
T 3a5r_A 271 ISNNIKTCLSDAFTPLNISDWNSL-FWIAHPG-----GPAILDQ----VTAKVGLE 316 (387)
T ss_dssp HHHHHHHHHHHHHGGGTCCCGGGS-EEEECCS-----CHHHHHH----HHHHHTCC
T ss_pred HHHHHHHHHHHHHHhcCCCChhhe-eEEECCC-----CHHHHHH----HHHHcCCC
Confidence 4667888999999999998 7777 5665444 5555444 44455665
No 181
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=27.39 E-value=63 Score=28.27 Aligned_cols=53 Identities=25% Similarity=0.293 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCe
Q psy16095 101 AQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPI 159 (241)
Q Consensus 101 ~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPl 159 (241)
.+...+.+...++++|++++++..+||.|-.+-|-...++++ +.|...++.|+
T Consensus 309 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~------~~l~~~~~~~v 361 (383)
T 1dkg_D 309 VEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQ------KKVAEFFGKEP 361 (383)
T ss_dssp SHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHH------HHHHHHHSSCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHH------HHHHHHhCCCC
Confidence 344566778899999999999989999999987755556554 44555566654
No 182
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=27.18 E-value=3.7e+02 Score=24.74 Aligned_cols=29 Identities=14% Similarity=0.308 Sum_probs=21.7
Q ss_pred CeEEEEEeeCCCceeEEEEeCCCCceecc
Q psy16095 1 MVIAIGFEGSANKLGIGIVDTKKNTILSN 29 (241)
Q Consensus 1 ~~~~~~~e~s~~~~~~~~~~~~~~~~~~~ 29 (241)
|..++|||=-...++||+.+.+..+++.|
T Consensus 1 m~~~iGIDlGTt~s~va~~~~g~~~ii~n 29 (509)
T 2v7y_A 1 MSKIIGIDLGTTNSCVAVLEGGEVKVIPN 29 (509)
T ss_dssp CCCEEEEEECSSEEEEEEEETTEEEECCC
T ss_pred CCCEEEEEcCCceEEEEEEECCEEEEEEC
Confidence 66799999877788899998755455543
No 183
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=26.98 E-value=29 Score=26.12 Aligned_cols=56 Identities=13% Similarity=0.156 Sum_probs=37.8
Q ss_pred cCCCCCeEEeeeeeec-----ccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 72 SIGKKNTILSNCRRTY-----VTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 72 ~~~~~~~il~~~~~s~-----~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
.++.+++||...+... ..-++|++-+.+...+ .+++++.++.|++...++.+++..
T Consensus 27 i~~~~~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~------aa~REl~EEtGl~~~~~~~~~~~~ 87 (156)
T 3gg6_A 27 FLSEQDEVLLIQEAKRECRGSWYLPAGRMEPGETIVE------ALQREVKEEAGLHCEPETLLSVEE 87 (156)
T ss_dssp CBCTTSEEEEEECCCTTSTTCEECSEEECCTTCCHHH------HHHHHHHHHHCEEEEEEEEEEEEE
T ss_pred EEeCCCEEEEEEecCCCCCCEEECCeeeccCCCCHHH------HHHHHHHHhhCceeEeeeEEEEEc
Confidence 3456678887665431 2355677776544322 588999999999988888887643
No 184
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=26.98 E-value=3e+02 Score=23.59 Aligned_cols=60 Identities=10% Similarity=-0.015 Sum_probs=38.7
Q ss_pred HHHHHHHHHhhCCCCcCCcCEEEEE-cCCCC-----CC--hhHHHHHHHHHHHHHhCCC-eEEeccchhhhhhcc
Q psy16095 108 VLEVLKEALDQAKVSRDDIDVICYT-KGPGM-----GG--PLTVVAIVARTLALLWNKP-IVGVNHCIGHIEMGR 173 (241)
Q Consensus 108 L~~~I~~~L~~agi~~~DID~IAvt-~GPGs-----~t--gLRVG~s~Ak~LA~~l~iP-li~V~HleaHa~sa~ 173 (241)
+..++++++++.+ .++..|+++ -||-. .+ +.+ +. .+.|...+++| ++-.|...+.+++-.
T Consensus 52 ~~~~i~~~~~~~~---~~i~gigi~~pG~vd~~~~~~~nl~w~--~~-~~~l~~~~~~p~V~v~NDanaaalgE~ 120 (332)
T 1sz2_A 52 LEAVIRVYLEEHK---VEVKDGCIAIACPITGDWVAMTNHTWA--FS-IAEMKKNLGFSHLEIINDFTAVSMAIP 120 (332)
T ss_dssp HHHHHHHHHHHSC---CCCCEEEEEESSCCCSSEECCSSSCCC--EE-HHHHHHHHTCSEEEEEEHHHHHHHHGG
T ss_pred HHHHHHHHHHhcC---CCccEEEEEEeCceeCCEEeeeCCCCc--CC-HHHHHHHhCCCcEEEEeCHhHHhcccc
Confidence 4456777777765 368888874 35521 11 122 23 36788889999 999998877776544
No 185
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=26.83 E-value=1.8e+02 Score=25.62 Aligned_cols=49 Identities=6% Similarity=-0.029 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEE
Q psy16095 106 SKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVG 161 (241)
Q Consensus 106 e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~ 161 (241)
++|...++.+-. -+.|.|.||.|+|..+.-|. +.+++.+...++++.++
T Consensus 39 ~~l~~~~~~l~~------l~p~fvsVT~gagg~~r~~t-~~~a~~i~~~~g~~~v~ 87 (304)
T 3fst_A 39 QTLWNSIDRLSS------LKPKFVSVTYGANSGERDRT-HSIIKGIKDRTGLEAAP 87 (304)
T ss_dssp HHHHHHHHHHHT------TCCSEEEECCCTTSSCHHHH-HHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHHHhc------CCCCEEEEeeCCCCcchhHH-HHHHHHHHHHhCCCeeE
Confidence 445555665532 35899999999998775552 34667777778888654
No 186
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=26.72 E-value=2.6e+02 Score=22.80 Aligned_cols=108 Identities=11% Similarity=-0.054 Sum_probs=59.4
Q ss_pred HHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEEec-cchhhhhhcccccCCCCcEEEEE
Q psy16095 108 VLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVGVN-HCIGHIEMGRNVTKCENPTVLYV 186 (241)
Q Consensus 108 L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~-HleaHa~sa~~~~~~~~Pl~L~V 186 (241)
+-.+++.+.+..+.. +..+. ..-|..++. ....+.+......+.|+..+. .-+|++.+... ...+++.+
T Consensus 77 l~~~~~~~~~~~~~~---~~~~v-~tvp~~~~~--~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~----~~~~viDi 146 (272)
T 3h1q_A 77 VRELKAKVERLLGSE---LFQAA-TAIPPGTVG--RNAEACGHVVAGAGLELVTLVDEPVAAARALGI----NDGIVVDI 146 (272)
T ss_dssp HHHHHHHHHHHSSSC---CCEEE-EECCSCC-----CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTC----SSEEEEEE
T ss_pred HHHHHHHHHHhcCCc---cCeEE-EEcCCCCCH--HHHHHHHHHHHHcCCeeeecccHHHHHHHHHcC----CCEEEEEE
Confidence 333555555555543 33333 344543322 112234445667788876654 44444433211 22245555
Q ss_pred eCCceEEEEEeCCcEEEEeeeccChhhhHHHHHHHHhCCC
Q psy16095 187 SGGNTQVIAYSRQRYRIFGETIDIAVGNCLDRFARVLKLS 226 (241)
Q Consensus 187 SGGhT~l~~~~~~~~~ilg~t~DdalGe~~Dkvar~LGl~ 226 (241)
-||.|.+..+..+.+. .....+..-..+-+.+++.|+++
T Consensus 147 Gggst~~~~~~~g~~~-~~~~~~~Gg~~~~~~l~~~l~~~ 185 (272)
T 3h1q_A 147 GGGTTGIAVIEKGKIT-ATFDEPTGGTHLSLVLAGSYKIP 185 (272)
T ss_dssp CSSCEEEEEEETTEEE-EECCBSCCHHHHHHHHHHHHTCC
T ss_pred CCCcEEEEEEECCEEE-EEecCCCcHHHHHHHHHHHhCCC
Confidence 5778888777766654 34555777777777888888876
No 187
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=26.71 E-value=84 Score=28.52 Aligned_cols=46 Identities=9% Similarity=0.089 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHhhCCCC-cCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCe
Q psy16095 104 HKSKVLEVLKEALDQAKVS-RDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPI 159 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~-~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPl 159 (241)
-.+.++.+++++|+++|++ ++|| .+++-.+ +.|+- +.++..+++|-
T Consensus 293 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~-----~~~i~----~~~~~~Lgl~~ 339 (413)
T 2p0u_A 293 ITKNIGGFLKDTKNLVGASSWNEL-FWAVHPG-----GPAIL----DQVEAKLELEK 339 (413)
T ss_dssp HHHHHHHHHHHHHHHTTCCSGGGS-EEEECCS-----SHHHH----HHHHHHTTCCG
T ss_pred HHHHHHHHHHHHHHHcCCCCccce-EEEECCC-----CHHHH----HHHHHHhCCCH
Confidence 3567888999999999998 7777 6776554 55553 44555667663
No 188
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=26.49 E-value=23 Score=32.48 Aligned_cols=23 Identities=22% Similarity=0.335 Sum_probs=21.1
Q ss_pred HHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 110 EVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 110 ~~I~~~L~~agi~~~DID~IAvt 132 (241)
.+++++|+++|++++|||.|=+.
T Consensus 317 ~a~~~al~~Agl~~~dId~vE~h 339 (418)
T 2iik_A 317 YAIPVALQKAGLTVSDVDIFEIN 339 (418)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEEC
T ss_pred HHHHHHHHHcCCCHHHCCeeeee
Confidence 58999999999999999999875
No 189
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=26.31 E-value=86 Score=28.23 Aligned_cols=46 Identities=13% Similarity=0.153 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhhCCCC-cCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC
Q psy16095 103 HHKSKVLEVLKEALDQAKVS-RDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP 158 (241)
Q Consensus 103 ~H~e~L~~~I~~~L~~agi~-~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP 158 (241)
.-.+.++.+++++|+++|++ ++|| .+.+-.+ +.|+--.+++ .+++|
T Consensus 279 ~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~-----~~~i~~~~~~----~lgl~ 325 (402)
T 1ee0_A 279 MVAKNIENAAEKALSPLGITDWNSV-FWMVHPG-----GRAILDQVER----KLNLK 325 (402)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCS-----SHHHHHHHHH----HTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCccccc-eEEECCC-----CHHHHHHHHH----HcCCC
Confidence 34567888999999999998 7777 6666544 5555444444 55665
No 190
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=26.22 E-value=84 Score=24.15 Aligned_cols=52 Identities=13% Similarity=0.059 Sum_probs=34.0
Q ss_pred CCCCCeEEeeeeeec-------cc-CCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEE
Q psy16095 73 IGKKNTILSNCRRTY-------VT-PPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVIC 130 (241)
Q Consensus 73 ~~~~~~il~~~~~s~-------~~-~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IA 130 (241)
++.++++|...+... .. .++|++-|.+.. ...+++++.++.|++..++..+.
T Consensus 45 ~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~------~~aa~REl~EEtGl~~~~~~~l~ 104 (180)
T 2fkb_A 45 HDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQL------LESARREAEEELGIAGVPFAEHG 104 (180)
T ss_dssp ECSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCH------HHHHHHHHHHHHCCBSCCCEEEE
T ss_pred ECCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCCH------HHHHHHHHHHHHCCCccceEEEE
Confidence 356678887655432 12 267777765432 22589999999999877776654
No 191
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=26.22 E-value=35 Score=32.25 Aligned_cols=29 Identities=14% Similarity=0.267 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
......+.+++|+++|++++|||.|.|..
T Consensus 55 ~~La~~Aa~~AL~~agi~~~dId~IivaT 83 (460)
T 2v4w_A 55 NSLCLTVVQRLMERIQLPWDSVGRLEVGT 83 (460)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 34445689999999999999999999854
No 192
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=26.11 E-value=84 Score=28.50 Aligned_cols=45 Identities=16% Similarity=0.181 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHhhCCCC-cCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC
Q psy16095 104 HKSKVLEVLKEALDQAKVS-RDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP 158 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~-~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP 158 (241)
-.+.++.+++++|+++|++ ++|| .+.+-.+ +.|+--. ++..+++|
T Consensus 298 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~-----~~~i~~~----~~~~Lgl~ 343 (413)
T 1xes_A 298 ISANIENCMVEAFSQFKISDWNKL-FWVVHPG-----GRAILDR----VEAKLNLD 343 (413)
T ss_dssp HHHHHHHHHHHHHGGGTCCCGGGS-EEEECCS-----CHHHHHH----HHHHTTCC
T ss_pred HHHHHHHHHHHHHHhcCCCCccce-eEEECCC-----CHHHHHH----HHHHcCCC
Confidence 4567888999999999998 7777 5555444 4454443 45556665
No 193
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=25.92 E-value=31 Score=31.12 Aligned_cols=24 Identities=29% Similarity=0.436 Sum_probs=21.5
Q ss_pred HHHHHHHHHhhCCCCcCCcCEEEE
Q psy16095 108 VLEVLKEALDQAKVSRDDIDVICY 131 (241)
Q Consensus 108 L~~~I~~~L~~agi~~~DID~IAv 131 (241)
...+++++|+++|++++|||.|-+
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ve~ 320 (396)
T 4dd5_A 297 PVPATKKALEAANMTIEDIDLVEA 320 (396)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEe
Confidence 346889999999999999999996
No 194
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=25.47 E-value=90 Score=23.71 Aligned_cols=51 Identities=10% Similarity=0.142 Sum_probs=34.3
Q ss_pred CeEEeeeeeec-cc----CCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 77 NTILSNCRRTY-VT----PPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 77 ~~il~~~~~s~-~~----~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
++||...+... .. -++|++-|.+... ..+++++.++.|++...++.+.+..
T Consensus 23 ~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~------~aa~REl~EEtGl~~~~~~~~~~~~ 78 (161)
T 3exq_A 23 QRVLVEDKVNVPWKAGHSFPGGHVEVGEPCA------TAAIREVFEETGLRLSGVTFCGTCE 78 (161)
T ss_dssp CCEEEECCCCCTTTCSBBCCCCBCCTTSCHH------HHHHHHHHHHHCCEESCCEEEEEEE
T ss_pred CEEEEEEccCCCCCCCEEccceecCCCCCHH------HHHHHHHHHhhCcEecCCcEEEEEe
Confidence 57776655432 12 5677777754332 2588999999999988888777643
No 195
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=25.23 E-value=56 Score=24.81 Aligned_cols=53 Identities=15% Similarity=0.031 Sum_probs=34.0
Q ss_pred cCCCCCeEEeeeeeec-------ccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEE
Q psy16095 72 SIGKKNTILSNCRRTY-------VTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVIC 130 (241)
Q Consensus 72 ~~~~~~~il~~~~~s~-------~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IA 130 (241)
.++.+++||...+... ..-++|++-|.+... ..+++++.++.|++....+.+.
T Consensus 34 ii~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~------~aa~REl~EEtGl~~~~~~~~~ 93 (165)
T 3oga_A 34 LIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIE------EALRREIREELGEQLILSDITP 93 (165)
T ss_dssp EEEETTEEEEEEECC------CCEECCCEECCTTCCHH------HHHHHHHHHHHCSSCCEEEEEE
T ss_pred EEeCCCEEEEEEecCCCCCCCCeEECCccccCCCCCHH------HHHHHHHHHHhCCCccccceee
Confidence 3445677877665422 345667777755433 2588999999999876555544
No 196
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=25.17 E-value=34 Score=31.70 Aligned_cols=25 Identities=12% Similarity=0.298 Sum_probs=21.8
Q ss_pred HHHHHHHHhhCCCCcCCcCEEEEEc
Q psy16095 109 LEVLKEALDQAKVSRDDIDVICYTK 133 (241)
Q Consensus 109 ~~~I~~~L~~agi~~~DID~IAvt~ 133 (241)
..+.+++|+++|++++|||.|.|..
T Consensus 59 ~~Aa~~al~~a~i~~~~Id~ii~aT 83 (460)
T 2wya_A 59 LTVVQRLMERIQLPWDSVGRLEVGT 83 (460)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEEEC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 3489999999999999999999843
No 197
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=24.23 E-value=52 Score=30.37 Aligned_cols=57 Identities=18% Similarity=0.189 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHhhCCCCcCCcCEEEE-----EcCCCC--CChhHHHHHHHHHHHHHhCCCeEE
Q psy16095 103 HHKSKVLEVLKEALDQAKVSRDDIDVICY-----TKGPGM--GGPLTVVAIVARTLALLWNKPIVG 161 (241)
Q Consensus 103 ~H~e~L~~~I~~~L~~agi~~~DID~IAv-----t~GPGs--~tgLRVG~s~Ak~LA~~l~iPli~ 161 (241)
.-.+.+-.+++++|+++++++++||+|+. ---|-. -..+-+| -...||...++|+|.
T Consensus 69 ~lg~~~a~av~~~l~~~~~~~~~i~~IGsHGQTv~H~P~~~~~~TlQiG--d~~~iA~~tgi~vV~ 132 (370)
T 3cqy_A 69 SVGKLFALAVNNLLAKTKIAKDEIIAIGSHGQTVRHMPNLEVGFTLQIG--DPNTIATETGIDVIA 132 (370)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEETTSSSCEEEEES--CHHHHHHHHSSCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccEEEeCCcccccCCCCCCCceEecC--CHHHHHHHHCcCEEe
Confidence 34455667899999999999999999995 334621 1123333 234577777887654
No 198
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=24.07 E-value=1.2e+02 Score=25.71 Aligned_cols=55 Identities=15% Similarity=0.126 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEEeccch
Q psy16095 103 HHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVGVNHCI 166 (241)
Q Consensus 103 ~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~Hle 166 (241)
...+.+..-|+.+.+++|-+++++..+||+.. .+ ...++. +...|+..+++|.++
T Consensus 7 ~nl~~i~~~i~~a~~~~~r~~~~v~l~AV~Ka---hg-----~~~i~~-~~~~G~~~fgen~vq 61 (245)
T 3sy1_A 7 HNLAQVRDKISAAATRCGRSPEEITLVAVSKT---KP-----ASAIAE-AIDAGQRQFSEHYVQ 61 (245)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCEEEEECTT---CC-----HHHHHH-HHHTTCCEEEESSHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEEECC---CC-----HHHHHH-HHHcCCCEEEEecHH
Confidence 34555666788888999999999999999987 22 223333 235788888888654
No 199
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=24.00 E-value=2.1e+02 Score=25.80 Aligned_cols=30 Identities=17% Similarity=0.276 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcC----EEEEEcC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDID----VICYTKG 134 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID----~IAvt~G 134 (241)
.+....+..++|+++|+++++|| .|.+..+
T Consensus 94 ~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~ 127 (430)
T 1ox0_A 94 SLYALYAAQEAVNHANLDVEALNRDRFGVIVASG 127 (430)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECS
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEEec
Confidence 34566789999999999999998 4555544
No 200
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=23.71 E-value=63 Score=23.62 Aligned_cols=53 Identities=19% Similarity=0.194 Sum_probs=32.4
Q ss_pred CCCCCeEEeeeeeec------ccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEE
Q psy16095 73 IGKKNTILSNCRRTY------VTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICY 131 (241)
Q Consensus 73 ~~~~~~il~~~~~s~------~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAv 131 (241)
++.+++||...+... ..-++|++-+.+... ..+++++.++.|++...++...+
T Consensus 16 ~~~~~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~------~aa~RE~~EE~Gl~~~~~~~~~~ 74 (144)
T 3r03_A 16 IDPDGRVLLAQRPPGKSLAGLWEFPGGKLEPGETPE------AALVRELAEELGVDTRASCLAPL 74 (144)
T ss_dssp BCTTSCEEEEECCTTSSSTTCEECSEEECCTTCCHH------HHHHHHHHHHHCCBCCGGGCEEE
T ss_pred EcCCCEEEEEEeCCCCCCCCcEECCCcEecCCCCHH------HHHHHHHHHHhCceeeccceEEE
Confidence 445677887665532 224555666544322 24788999999998777654433
No 201
>3j21_S 50S ribosomal protein L22P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=23.21 E-value=40 Score=27.42 Aligned_cols=86 Identities=22% Similarity=0.308 Sum_probs=44.2
Q ss_pred chhhccccchhhhhhhhhhhccccCCC--cCCC-CCeEEeeeeeecccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCC
Q psy16095 45 RETAQHHKSKVLEEKFDYLSQNQRGKG--SIGK-KNTILSNCRRTYVTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKV 121 (241)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~il~~~~~s~~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi 121 (241)
|++|+.=|-+-++|.+.+|+.--.-+. +|-. +|. +. +.+| ..-.-|=-|.-+++.=.+.|-.++..+-. .|+
T Consensus 33 r~va~~IrG~~v~~A~~~L~~V~~~k~~vPf~r~~~g-vg--~~~~-~~~~~gr~PkKaa~~ilklL~sA~aNAe~-kgl 107 (155)
T 3j21_S 33 VEVCRELRGMMLNDALRYLDDVIALKRPVPLKRYNDS-QG--HKPG-KGFGPGRYPVKVAKAIKKVLLNVKNNAVQ-KGL 107 (155)
T ss_dssp HHHHHHHTTCBHHHHHHHHHHHHHTCSCEECCSSCTT-CC--BCCS-SSCSBEECCHHHHHHHHHHHHHHHHHHHH-HTC
T ss_pred HHHHHHHCCCcHHHHHHHHHHHHhcccceeeeeecCC-Cc--cccc-cCCCcCcCcHHHHHHHHHHHHHHHHHHHH-cCC
Confidence 678888888889999999986000000 0000 000 00 0011 00001336766665544444445555522 477
Q ss_pred CcCC--cCEEEEEcCC
Q psy16095 122 SRDD--IDVICYTKGP 135 (241)
Q Consensus 122 ~~~D--ID~IAvt~GP 135 (241)
+.++ |..|.|..||
T Consensus 108 d~d~L~I~~i~vnkgp 123 (155)
T 3j21_S 108 DPDKLKIIHIAAHKGP 123 (155)
T ss_dssp CGGGCEEEEEEEEEEE
T ss_pred ChhheEEEEEEecCCC
Confidence 7665 6778888887
No 202
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=23.17 E-value=1.5e+02 Score=27.84 Aligned_cols=49 Identities=12% Similarity=0.091 Sum_probs=38.3
Q ss_pred hHHHHHHHHHH-------HHHHHhh----CCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHH
Q psy16095 101 AQHHKSKVLEV-------LKEALDQ----AKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALL 154 (241)
Q Consensus 101 ~r~H~e~L~~~-------I~~~L~~----agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~ 154 (241)
-+...+.++.+ ++++|++ +|++++|||.+.+-.- -.|+.-..+|.|...
T Consensus 211 ~~~av~~l~~~~~~y~~~~~~~l~~~~~~~gl~~~did~~v~Hqa-----n~rii~~~~~rL~~~ 270 (460)
T 2v4w_A 211 IQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTLDDLQYMIFHTP-----FCKMVQKSLARLMFN 270 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCGGGCSEEEECCS-----SHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCHHHhceEeecCC-----chHHHHHHHHHcCCC
Confidence 34556667777 7888888 8999999999998543 688988888887654
No 203
>4a17_Q RPL17, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Q 4a1c_Q 4a1e_Q
Probab=22.99 E-value=64 Score=27.01 Aligned_cols=22 Identities=27% Similarity=0.244 Sum_probs=19.2
Q ss_pred Cchhhccccchhhhhhhhhhhc
Q psy16095 44 PRETAQHHKSKVLEEKFDYLSQ 65 (241)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~ 65 (241)
-|+||+.=|-+-++|.+.||+.
T Consensus 31 ~reva~~IRG~~v~~A~~~L~~ 52 (183)
T 4a17_Q 31 TYEVVRAIKGLNLENAKRYLKA 52 (183)
T ss_dssp HHHHHHHHTTSBHHHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHHHHH
Confidence 3789998899999999999984
No 204
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=22.98 E-value=91 Score=24.96 Aligned_cols=37 Identities=19% Similarity=0.276 Sum_probs=21.9
Q ss_pred CcCEEEEEcCCCCCChhHHHHH---HHHHHHHHhCCCeEEec
Q psy16095 125 DIDVICYTKGPGMGGPLTVVAI---VARTLALLWNKPIVGVN 163 (241)
Q Consensus 125 DID~IAvt~GPGs~tgLRVG~s---~Ak~LA~~l~iPli~V~ 163 (241)
+.|+|... |||+++.-...+. ..+ .....++|+.+|-
T Consensus 40 ~~D~lilP-G~g~~~~~~~~~~~~~~i~-~~~~~~~PvlGIC 79 (211)
T 4gud_A 40 AADKLFLP-GVGTASEAMKNLTERDLIE-LVKRVEKPLLGIC 79 (211)
T ss_dssp HCSEEEEC-CCSCHHHHHHHHHHTTCHH-HHHHCCSCEEEET
T ss_pred CCCEEEEC-CCCCHHHHHHHHHhcChHH-HHHHcCCCEEEEc
Confidence 46899884 8887753211111 112 2335789999985
No 205
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=22.97 E-value=54 Score=28.66 Aligned_cols=54 Identities=17% Similarity=0.210 Sum_probs=39.6
Q ss_pred hhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHh-CCCe
Q psy16095 100 TAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLW-NKPI 159 (241)
Q Consensus 100 A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l-~iPl 159 (241)
..+...+.+...|+++|++++++..+||.|-.+-|-...++++ +.|...+ ++|+
T Consensus 318 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~------~~l~~~~~~~~v 372 (394)
T 3qfu_A 318 LNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQ------QLLESYFDGKKA 372 (394)
T ss_dssp HHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHH------HHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHH------HHHHHHcCCCCC
Confidence 3444556677789999999999999999999987765566654 4455566 5654
No 206
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=22.41 E-value=70 Score=23.83 Aligned_cols=53 Identities=11% Similarity=0.033 Sum_probs=33.1
Q ss_pred CCCCCeEEeeeeeec-----ccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCc--CCcCEEEE
Q psy16095 73 IGKKNTILSNCRRTY-----VTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSR--DDIDVICY 131 (241)
Q Consensus 73 ~~~~~~il~~~~~s~-----~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~--~DID~IAv 131 (241)
++++++||...+... ..-++|++-|.+... ..+++++.++.|++. .++..+++
T Consensus 26 ~~~~~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~------~aa~REl~EEtGl~~~~~~~~~~~~ 85 (160)
T 1rya_A 26 ENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLE------AAFERLTMAELGLRLPITAGQFYGV 85 (160)
T ss_dssp ECTTSCEEEEEECSSSSTTSEECCEEECCTTCCHH------HHHHHHHHHHHSSCCCGGGSEEEEE
T ss_pred EcCCCEEEEEeccCCCCCCEEECCccccCCCCCHH------HHHHHHHHHHHCCCCCcccceEEEE
Confidence 345678887666541 235566776654422 247889999999984 35555554
No 207
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=22.25 E-value=1.4e+02 Score=24.28 Aligned_cols=54 Identities=22% Similarity=0.271 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCC---CChhHHHHHHHHHHHHHhCCCeEEecc
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDIDVICYTKGPGM---GGPLTVVAIVARTLALLWNKPIVGVNH 164 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs---~tgLRVG~s~Ak~LA~~l~iPli~V~H 164 (241)
.+.--.++++++++.+++++||-.|-+|.-|-+ |++ ..|+.+ ---++|+....-
T Consensus 50 ~~At~ELl~eii~~N~l~~eDIvSv~FTvT~DL~A~FPA-----~aaR~~-Gw~~VPLmc~qE 106 (148)
T 1xho_A 50 VAETQKLLKEMAEKNGLEEDDIISIIFTVTKDLDAAFPA-----IAARNM-GWTSTALMCMNE 106 (148)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEEEECTTCCSSCTH-----HHHHHT-TCTTSEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCccCccChH-----HHHHHc-CCCccchhhccc
Confidence 444555889999999999999999999999975 553 345555 234578877543
No 208
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=21.96 E-value=90 Score=28.13 Aligned_cols=45 Identities=13% Similarity=0.183 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhhCCCC-cCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCC
Q psy16095 104 HKSKVLEVLKEALDQAKVS-RDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKP 158 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~-~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iP 158 (241)
-.+.++.+++++|+++|++ ++|| .+.+-.+ +.|+--.+ +..+++|
T Consensus 288 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~-----~~~i~~~~----~~~lgl~ 333 (402)
T 3awk_A 288 ISKNIDKVLAEPLEYVHFPSYNDM-FWAVHPG-----GPAILDQI----EAKLGLS 333 (402)
T ss_dssp HHHHHHHHTHHHHHHTTCCCGGGE-EEEECCS-----CHHHHHHH----HHHTTCC
T ss_pred HHHHHHHHHHHHHHhcCCCCccce-eEEECCC-----cHHHHHHH----HHHcCCC
Confidence 4566888999999999998 5666 5655444 55554444 4456665
No 209
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=21.82 E-value=2.6e+02 Score=24.55 Aligned_cols=53 Identities=21% Similarity=0.268 Sum_probs=37.2
Q ss_pred HHHHHHhhCC-CCcCCcCEEEEEcCCCCC--ChhHHHHHHHHHHHHHhCCCeEEecc
Q psy16095 111 VLKEALDQAK-VSRDDIDVICYTKGPGMG--GPLTVVAIVARTLALLWNKPIVGVNH 164 (241)
Q Consensus 111 ~I~~~L~~ag-i~~~DID~IAvt~GPGs~--tgLRVG~s~Ak~LA~~l~iPli~V~H 164 (241)
.++.++ +.| +..+++|.|+++.=|... ..+.--....+.++..+++|++-+..
T Consensus 191 ~~d~~~-~~g~~~~~~~DvIG~syYp~w~~~~~~~~l~~~l~~~~~rygKpv~v~Et 246 (332)
T 1hjs_A 191 WYTNVL-KQGTLELSDFDMMGVSFYPFYSSSATLSALKSSLDNMAKTWNKEIAVVET 246 (332)
T ss_dssp HHHHHH-TTSSSCGGGCCEEEEECCSSSCTTCCHHHHHHHHHHHHHHHCCEEEEEEC
T ss_pred HHHHHH-hcCCCCCCCcCEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 344444 344 666799999999999755 23444445667888888999988764
No 210
>2lai_A Avirulence protein ATR13; nucleolar localization, signaling protein; NMR {Hyaloperonospora parasitica}
Probab=21.74 E-value=10 Score=28.40 Aligned_cols=21 Identities=29% Similarity=0.444 Sum_probs=15.6
Q ss_pred HHHHHHHhCCCCCCCCcHHHHhhh
Q psy16095 216 LDRFARVLKLSNDPSPGYNIEQMA 239 (241)
Q Consensus 216 ~Dkvar~LGl~~~p~PGp~iE~lA 239 (241)
|..++.+|.-- ||||.||+..
T Consensus 56 yasv~eylkk~---ypgp~ieriv 76 (101)
T 2lai_A 56 YASVMEYLKKT---YPGPDIERIV 76 (101)
T ss_dssp SCCCCCCTTTS---CCSHHHHHHH
T ss_pred HHHHHHHHHHh---CCCccHHHHH
Confidence 45566676666 9999999864
No 211
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=21.60 E-value=79 Score=24.76 Aligned_cols=42 Identities=17% Similarity=0.185 Sum_probs=31.2
Q ss_pred cCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCC
Q psy16095 89 TPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPG 136 (241)
Q Consensus 89 ~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPG 136 (241)
.-++|++-|-+.... .+++++.++.|++...++.+++...|.
T Consensus 70 ~lPGG~ve~gEs~~~------aa~REl~EEtGl~~~~~~~l~~~~~~~ 111 (187)
T 3i9x_A 70 AVPGGFVDENESAEQ------AAERELEEETSLTDIPLIPFGVFDKPG 111 (187)
T ss_dssp ECSEEECCTTSCHHH------HHHHHHHHHHCCCSCCCEEEEEECCTT
T ss_pred ECCceeCCCCCCHHH------HHHHHHHHHHCCCCcceEEEEEEcCCc
Confidence 355677777543322 588999999999999999998866654
No 212
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=21.49 E-value=59 Score=28.71 Aligned_cols=54 Identities=20% Similarity=0.246 Sum_probs=39.2
Q ss_pred hhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHh-CCCe
Q psy16095 100 TAQHHKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLW-NKPI 159 (241)
Q Consensus 100 A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l-~iPl 159 (241)
..+.-.+.+...|+++|++++++..+||.|-.+-|-...++++ +.|...+ ++|+
T Consensus 326 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~------~~l~~~~~~~~v 380 (404)
T 3i33_A 326 LNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQ------KLLQDFFNGKEL 380 (404)
T ss_dssp HTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHH------HHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHH------HHHHHHcCCCCC
Confidence 3344556667889999999999999999999987755556553 4455566 5554
No 213
>1iv3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, non-mevalonate, riken structural genomics/proteomics initiative, RSGI; 1.52A {Thermus thermophilus} SCOP: d.79.5.1 PDB: 1iv2_A 1iv4_A* 1iv1_A
Probab=21.32 E-value=1.2e+02 Score=24.67 Aligned_cols=56 Identities=11% Similarity=0.105 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEEe
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVGV 162 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V 162 (241)
.+..|..-+-+.+++.|+.+.++|..-+...|-..+=. -.+.+.||..+++|.-.|
T Consensus 72 ~S~~lL~~~~~~~~~~G~~i~NvD~tii~q~PKi~p~~---~~m~~~ia~~L~~~~~~V 127 (152)
T 1iv3_A 72 RSEVFLREAMRLVEARGAKLLQASLVLTLDRPKLGPHR---KALVDSLSRLMRLPQDRI 127 (152)
T ss_dssp CHHHHHHHHHHHHHHTTCCEEEEEEEEECSSSCCGGGH---HHHHHHHHHHHTCCGGGE
T ss_pred CHHHHHHHHHHHHHHcCCEEEEEEEEEEecCCcCHHHH---HHHHHHHHHHhCCCCceE
Confidence 45667777777889999999999999999999765432 234577899999985333
No 214
>3v4d_A Aminoacrylate peracid reductase RUTC; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 1.95A {Escherichia coli O6}
Probab=21.28 E-value=1.2e+02 Score=23.22 Aligned_cols=42 Identities=14% Similarity=0.235 Sum_probs=30.1
Q ss_pred CCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEE
Q psy16095 90 PPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICY 131 (241)
Q Consensus 90 ~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAv 131 (241)
.+.||.++......+.+....-++.+|+++|.+++||=.+-+
T Consensus 43 d~~~~~~~~~d~~~Q~~~~l~nl~~~L~~aG~~l~~vvk~~v 84 (134)
T 3v4d_A 43 DQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSI 84 (134)
T ss_dssp CTTSCBSSTTCHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred CCCCCEECCccHHHHHHHHHHHHHHHHHHcCCCHHHeEEEEE
Confidence 344555544445667777778899999999999998655544
No 215
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=21.17 E-value=48 Score=25.77 Aligned_cols=53 Identities=11% Similarity=0.092 Sum_probs=35.3
Q ss_pred cCCCCCeEEeeeeeec------ccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEE
Q psy16095 72 SIGKKNTILSNCRRTY------VTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVIC 130 (241)
Q Consensus 72 ~~~~~~~il~~~~~s~------~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IA 130 (241)
.++.++++|...+... ..-++|++-|.+... ..+++++.++.|++...++.+.
T Consensus 48 i~~~~~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~------~aa~REl~EEtGl~~~~~~~l~ 106 (182)
T 2yvp_A 48 PVTERGTALLVRQYRHPTGKFLLEVPAGKVDEGETPE------AAARRELREEVGAEAETLIPLP 106 (182)
T ss_dssp EBCTTSEEEEEEEEEGGGTEEEEECCEEECCTTCCHH------HHHHHHHHHHHCEECSCEEECC
T ss_pred EEcCCCEEEEEEeccCCCCCcEEEeccccCCCCcCHH------HHHHHHHHHHhCCCcccEEEEE
Confidence 3556778877655431 246677787755332 2589999999999877666554
No 216
>3r79_A Uncharacterized protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium, TIM barrel; HET: PLP; 1.90A {Agrobacterium tumefaciens}
Probab=21.16 E-value=1.5e+02 Score=25.25 Aligned_cols=54 Identities=9% Similarity=0.132 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHhhCCCCcCCcCEEEEEcCCCCCChhHHHHHHHHHHHHHhCCCeEEeccch
Q psy16095 104 HKSKVLEVLKEALDQAKVSRDDIDVICYTKGPGMGGPLTVVAIVARTLALLWNKPIVGVNHCI 166 (241)
Q Consensus 104 H~e~L~~~I~~~L~~agi~~~DID~IAvt~GPGs~tgLRVG~s~Ak~LA~~l~iPli~V~Hle 166 (241)
..+.+..-|+.+.+++|-+++++..+||+.. .+. ..++. +...|+..+++|.++
T Consensus 9 nl~~v~~~i~~a~~~~~r~~~~v~l~AVvKa---hga-----~~i~~-~~~~G~~~fgen~vq 62 (244)
T 3r79_A 9 RLEDVRQRIADVAEKSGRKAADVALVAVSKT---FDA-----EAIQP-VIDAGQRVFGENRVQ 62 (244)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGSEEEEECTT---CCH-----HHHHH-HHHTTCCEEEESCHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEEECC---cCH-----HHHHH-HHHCCCCEEEEeeHH
Confidence 4455666788888999999999999999987 222 22333 235788889998764
No 217
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=21.04 E-value=1.1e+02 Score=27.78 Aligned_cols=30 Identities=13% Similarity=0.233 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhhCCCCcCCcC----EEEEEcC
Q psy16095 105 KSKVLEVLKEALDQAKVSRDDID----VICYTKG 134 (241)
Q Consensus 105 ~e~L~~~I~~~L~~agi~~~DID----~IAvt~G 134 (241)
.+....+++++|+++|+++++|| .|.+..+
T Consensus 93 ~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~ 126 (428)
T 3mqd_A 93 TAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSG 126 (428)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEES
T ss_pred HHHHHHHHHHHHHHcCCChhHccccceEEEEccC
Confidence 44556689999999999999998 5666554
No 218
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=20.35 E-value=51 Score=23.52 Aligned_cols=53 Identities=15% Similarity=0.152 Sum_probs=32.2
Q ss_pred CCCCCeEEeeeeee-cccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEE
Q psy16095 73 IGKKNTILSNCRRT-YVTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICY 131 (241)
Q Consensus 73 ~~~~~~il~~~~~s-~~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAv 131 (241)
+++++++|...+.. ...-++|++-|.+... ..+++++.++.|++...++.++.
T Consensus 10 ~~~~~~vLl~~r~~g~w~~PgG~ve~gE~~~------~aa~RE~~EE~Gl~~~~~~~~~~ 63 (126)
T 1vcd_A 10 FNAKREVLLLRDRMGFWVFPKGHPEPGESLE------EAAVREVWEETGVRAEVLLPLYP 63 (126)
T ss_dssp ECTTSCEEEEECTTSCEECCEECCCTTCCHH------HHHHHHHHHHHCCEEEEEEEEEE
T ss_pred EcCCCEEEEEEECCCCccCCcCcCCCCCCHH------HHHHHHHHHhhCcEeeeccEEeE
Confidence 34456676655432 2235566776644322 24788999999998766665553
No 219
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=20.21 E-value=64 Score=24.49 Aligned_cols=51 Identities=18% Similarity=0.184 Sum_probs=33.2
Q ss_pred CCeEEeeeeee-----cccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEEE
Q psy16095 76 KNTILSNCRRT-----YVTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICYT 132 (241)
Q Consensus 76 ~~~il~~~~~s-----~~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAvt 132 (241)
+++||...+.. ++.-++|++-+.+.. ...+++++.++.|++...++.+.+.
T Consensus 39 ~~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~------~~aa~REl~EEtGl~~~~~~~~~~~ 94 (157)
T 4dyw_A 39 DGRILLIKRKRAPEAGCWGLPGGKVDWLEPV------ERAVCREIEEELGIALERATLLCVV 94 (157)
T ss_dssp TTEEEEEEECSSSSTTCEECCEEECCTTCCH------HHHHHHHHHHHHSCEEESCEEEEEE
T ss_pred CCEEEEEEecCCCCCCEEECCcccCCCCCCH------HHHHHHHHHHHHCcccccCcEEEEE
Confidence 45677665542 123456666665432 2258899999999998888777754
No 220
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=20.13 E-value=72 Score=24.62 Aligned_cols=53 Identities=19% Similarity=0.342 Sum_probs=34.6
Q ss_pred CCCCCeEEeeeeeec--ccCCCCcccchhhhHHHHHHHHHHHHHHHhhCCCCcCCcCEEEE
Q psy16095 73 IGKKNTILSNCRRTY--VTPPGEGFLPRETAQHHKSKVLEVLKEALDQAKVSRDDIDVICY 131 (241)
Q Consensus 73 ~~~~~~il~~~~~s~--~~~~~gGvvPe~A~r~H~e~L~~~I~~~L~~agi~~~DID~IAv 131 (241)
++.++++|...+... ..-++|++-|-+... ..+++++.++.|++...+..+..
T Consensus 16 ~~~~~~vLl~~r~~~~~w~~p~G~~e~gE~~~------~aa~RE~~EE~G~~~~~~~~~~~ 70 (164)
T 2kdv_A 16 CNRQGQVMWARRFGQHSWQFPQGGINPGESAE------QAMYRELFEEVGLSRKDVRILAS 70 (164)
T ss_dssp ECTTSEEEEEEETTCCCEECCEEECCTTCCHH------HHHHHHHHHHHCCCGGGEEEEEE
T ss_pred EccCCEEEEEEEcCCCeEECCeeecCCCCCHH------HHHHHHHHHHHCCCccceEEEEE
Confidence 345567776554321 335667777755432 25889999999999887766665
Done!