BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy16098
         (99 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P55081|MFAP1_HUMAN Microfibrillar-associated protein 1 OS=Homo sapiens GN=MFAP1 PE=1
           SV=2
          Length = 439

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/94 (54%), Positives = 63/94 (67%), Gaps = 6/94 (6%)

Query: 11  VQSTAGAVPVLNEKGEVTMKKVKVHRYVSGKRPDYAQGSSDSEDDDDEVVNRKSEFTSIP 70
           +QSTAGAVPV NEKGE++M+KVKV RYVSGKRPDYA   S  E+D++    +K++     
Sbjct: 13  IQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAE 72

Query: 71  HIPFE-----DPRLRRLTSRKQEDAEEDRRSRHR 99
               E     DPRLRRL +R  ED EE R +RHR
Sbjct: 73  PEEQEEDSSSDPRLRRLQNRISEDVEE-RLARHR 105


>sp|Q9CQU1|MFAP1_MOUSE Microfibrillar-associated protein 1 OS=Mus musculus GN=Mfap1 PE=1
           SV=1
          Length = 439

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/94 (54%), Positives = 63/94 (67%), Gaps = 6/94 (6%)

Query: 11  VQSTAGAVPVLNEKGEVTMKKVKVHRYVSGKRPDYAQGSSDSEDDDDEVVNRKSEFTSIP 70
           +QSTAGAVPV NEKGE++M+KVKV RYVSGKRPDYA   S  E+D++    +K++     
Sbjct: 13  IQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAE 72

Query: 71  HIPFE-----DPRLRRLTSRKQEDAEEDRRSRHR 99
               E     DPRLRRL +R  ED EE R +RHR
Sbjct: 73  PEEQEEDSSSDPRLRRLQNRISEDVEE-RLARHR 105


>sp|Q5EA98|MFAP1_BOVIN Microfibrillar-associated protein 1 OS=Bos taurus GN=MFAP1 PE=2
           SV=1
          Length = 439

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/94 (54%), Positives = 63/94 (67%), Gaps = 6/94 (6%)

Query: 11  VQSTAGAVPVLNEKGEVTMKKVKVHRYVSGKRPDYAQGSSDSEDDDDEVVNRKSEFTSIP 70
           +QSTAGAVPV NEKGE++M+KVKV RYVSGKRPDYA   S  E+D++    +K++     
Sbjct: 13  IQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAE 72

Query: 71  HIPFE-----DPRLRRLTSRKQEDAEEDRRSRHR 99
               E     DPRLRRL +R  ED EE R +RHR
Sbjct: 73  PEEQEEDSSSDPRLRRLQNRISEDVEE-RLARHR 105


>sp|Q54SU3|MFAP1_DICDI Protein MFAP1 homolog OS=Dictyostelium discoideum GN=mfap1 PE=3
          SV=1
          Length = 460

 Score = 36.2 bits (82), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 32 VKVHRYVSGKRPDYAQGSSDSEDDDDEVVNRKSEFTSIPHIPFEDPRLRRLTSR 85
           KV RY +G+RPDYA+   D +     + N+K    SI      DPRL R  +R
Sbjct: 28 TKVIRYRAGQRPDYAEAEDDQDSHFSNIQNQK----SIKEAETNDPRLARFKNR 77


>sp|A5FZ51|ATPD_ACICJ ATP synthase subunit delta OS=Acidiphilium cryptum (strain JF-5)
          GN=atpH PE=3 SV=1
          Length = 197

 Score = 30.4 bits (67), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 29/58 (50%)

Query: 39 SGKRPDYAQGSSDSEDDDDEVVNRKSEFTSIPHIPFEDPRLRRLTSRKQEDAEEDRRS 96
          SG    YA+   +  D+  ++    SE  ++  +  EDP LRRL + +  DA E  R+
Sbjct: 20 SGLSARYARALYELADERKQLDEVVSEMAALGRLFAEDPSLRRLIASRSIDAREAGRA 77


>sp|P55080|MFAP1_CHICK Microfibrillar-associated protein 1 OS=Gallus gallus GN=MFAP1 PE=2
           SV=1
          Length = 442

 Score = 28.9 bits (63), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 8/96 (8%)

Query: 11  VQSTAGAVPVLNEKGEVTMKKVKVHRYVSGK-RPDYAQGSSDSEDDDDEVVNRKSEFTSI 69
           +QSTAGA P  NEKG     + +      GK   DY    S  E+D++    +K++   +
Sbjct: 13  IQSTAGACPSRNEKGRAVYGEGEGETVCVGKAAADYVPMESSEEEDEEFQFIKKAKEQEV 72

Query: 70  PHIPFE-----DPRLRRLT-SRKQEDAEEDRRSRHR 99
                E     DPRLRRL  +R  ED EE R +RHR
Sbjct: 73  EPEEQEEEVANDPRLRRLLQNRITEDVEE-RLARHR 107


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.309    0.127    0.350 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,908,146
Number of Sequences: 539616
Number of extensions: 1550917
Number of successful extensions: 4978
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 4934
Number of HSP's gapped (non-prelim): 53
length of query: 99
length of database: 191,569,459
effective HSP length: 68
effective length of query: 31
effective length of database: 154,875,571
effective search space: 4801142701
effective search space used: 4801142701
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)