Query psy16098
Match_columns 99
No_of_seqs 77 out of 79
Neff 3.9
Searched_HMMs 13730
Date Fri Aug 16 20:49:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16098.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16098hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pvma3 g.41.13.1 (A:143-178) 79.2 0.39 2.9E-05 26.0 1.4 12 17-28 12-23 (36)
2 d1vcda1 d.113.1.1 (A:1-126) AP 26.5 11 0.00079 22.6 1.1 17 14-31 4-20 (126)
3 d2yzqa1 d.37.1.1 (A:123-278) U 23.4 14 0.0011 22.2 1.3 13 15-27 35-47 (156)
4 d1sjya_ d.113.1.1 (A:) Hypothe 21.8 23 0.0017 21.3 2.0 19 12-31 12-30 (158)
5 d2ouxa2 d.37.1.1 (A:136-262) M 20.5 18 0.0013 21.6 1.3 12 16-27 97-108 (127)
6 d1hzta_ d.113.1.2 (A:) Isopent 19.5 11 0.0008 23.8 0.0 16 17-32 6-21 (153)
7 d1vr9a3 d.37.1.1 (A:1-121) Hyp 16.9 26 0.0019 20.5 1.4 13 15-27 91-103 (121)
8 d1jkna_ d.113.1.1 (A:) Diadeno 16.1 38 0.0028 20.9 2.2 17 14-31 16-32 (165)
9 d3ddja2 d.37.1.1 (A:1-135) Unc 15.2 29 0.0021 20.3 1.3 12 16-27 106-117 (135)
10 d2riha1 d.37.1.1 (A:2-132) Unc 15.0 30 0.0022 20.2 1.3 11 17-27 99-109 (131)
No 1
>d1pvma3 g.41.13.1 (A:143-178) Hypothetical protein Ta0289 C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=79.21 E-value=0.39 Score=26.01 Aligned_cols=12 Identities=58% Similarity=0.886 Sum_probs=10.7
Q ss_pred ceeeecccccee
Q psy16098 17 AVPVLNEKGEVT 28 (99)
Q Consensus 17 AvpVrNeKge~s 28 (99)
-+||-|+||+|+
T Consensus 12 l~pvy~~kgeik 23 (36)
T d1pvma3 12 LEPVYNEKGEIK 23 (36)
T ss_dssp EEEEECTTSCEE
T ss_pred EEEeecCCCcEE
Confidence 689999999984
No 2
>d1vcda1 d.113.1.1 (A:1-126) AP6A hydrolase Ndx1 {Thermus thermophilus [TaxId: 274]}
Probab=26.49 E-value=11 Score=22.57 Aligned_cols=17 Identities=47% Similarity=0.634 Sum_probs=13.3
Q ss_pred cCCceeeeccccceeeee
Q psy16098 14 TAGAVPVLNEKGEVTMKK 31 (99)
Q Consensus 14 TAGAvpVrNeKge~smqK 31 (99)
.|||| |.|++|++-+.+
T Consensus 4 ~agav-v~~~~~~vLl~~ 20 (126)
T d1vcda1 4 GAGGV-VFNAKREVLLLR 20 (126)
T ss_dssp EEEEE-EECTTSCEEEEE
T ss_pred EEEEE-EEECCCEEEEEE
Confidence 57888 678999998854
No 3
>d2yzqa1 d.37.1.1 (A:123-278) Uncharacterized protein PH1780 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=23.40 E-value=14 Score=22.23 Aligned_cols=13 Identities=31% Similarity=0.705 Sum_probs=10.8
Q ss_pred CCceeeeccccce
Q psy16098 15 AGAVPVLNEKGEV 27 (99)
Q Consensus 15 AGAvpVrNeKge~ 27 (99)
-.++||.|++|++
T Consensus 35 ~~~lPVvd~~~~l 47 (156)
T d2yzqa1 35 SMALPVVDSEGNL 47 (156)
T ss_dssp SSEEEEECTTSCE
T ss_pred CCEEEEEeCCCCc
Confidence 3499999999974
No 4
>d1sjya_ d.113.1.1 (A:) Hypothetical protein DR1025 {Deinococcus radiodurans [TaxId: 1299]}
Probab=21.76 E-value=23 Score=21.34 Aligned_cols=19 Identities=37% Similarity=0.718 Sum_probs=13.6
Q ss_pred cccCCceeeeccccceeeee
Q psy16098 12 QSTAGAVPVLNEKGEVTMKK 31 (99)
Q Consensus 12 ~STAGAvpVrNeKge~smqK 31 (99)
..+||+| |.|++|++-|.+
T Consensus 12 ~~a~~~v-i~~~~g~iLl~~ 30 (158)
T d1sjya_ 12 LRAAGVV-LLNERGDILLVQ 30 (158)
T ss_dssp EEEEEEE-EBCTTCCEEEEE
T ss_pred eeEEEEE-EEeCCCEEEEEE
Confidence 3455555 889999998755
No 5
>d2ouxa2 d.37.1.1 (A:136-262) Magnesium transporter MgtE {Enterococcus faecalis [TaxId: 1351]}
Probab=20.53 E-value=18 Score=21.65 Aligned_cols=12 Identities=33% Similarity=0.374 Sum_probs=10.2
Q ss_pred Cceeeeccccce
Q psy16098 16 GAVPVLNEKGEV 27 (99)
Q Consensus 16 GAvpVrNeKge~ 27 (99)
+++||.|+.|++
T Consensus 97 ~~lPVVD~~g~l 108 (127)
T d2ouxa2 97 LAVPVTDYDDHL 108 (127)
T ss_dssp SEEEEECTTCBE
T ss_pred EEEEEEeCCCEE
Confidence 489999998876
No 6
>d1hzta_ d.113.1.2 (A:) Isopentenyl diphosphate isomerase {Escherichia coli [TaxId: 562]}
Probab=19.47 E-value=11 Score=23.77 Aligned_cols=16 Identities=19% Similarity=0.358 Sum_probs=12.7
Q ss_pred ceeeeccccceeeeee
Q psy16098 17 AVPVLNEKGEVTMKKV 32 (99)
Q Consensus 17 AvpVrNeKge~smqKv 32 (99)
.|-|.|++|++-++|=
T Consensus 6 ~v~i~n~~g~vLl~kR 21 (153)
T d1hzta_ 6 SSWLFNAKGQLLVTRR 21 (153)
T ss_dssp EEEEECTTCCEEEEEE
T ss_pred EEEEEECCCEEEEEEe
Confidence 3558999999988763
No 7
>d1vr9a3 d.37.1.1 (A:1-121) Hypothetical protein TM0892, CBS tandem {Thermotoga maritima [TaxId: 2336]}
Probab=16.93 E-value=26 Score=20.50 Aligned_cols=13 Identities=23% Similarity=0.424 Sum_probs=10.7
Q ss_pred CCceeeeccccce
Q psy16098 15 AGAVPVLNEKGEV 27 (99)
Q Consensus 15 AGAvpVrNeKge~ 27 (99)
.+.+||.|++|++
T Consensus 91 ~~~lpVvde~g~~ 103 (121)
T d1vr9a3 91 EPYLPVVDEEMRL 103 (121)
T ss_dssp CSEEEEECTTCBE
T ss_pred ceeeeeECCCCeE
Confidence 3579999999885
No 8
>d1jkna_ d.113.1.1 (A:) Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) {Narrow-leaved blue lupine (Lupinus angustifolius) [TaxId: 3871]}
Probab=16.10 E-value=38 Score=20.91 Aligned_cols=17 Identities=12% Similarity=0.319 Sum_probs=13.4
Q ss_pred cCCceeeeccccceeeee
Q psy16098 14 TAGAVPVLNEKGEVTMKK 31 (99)
Q Consensus 14 TAGAvpVrNeKge~smqK 31 (99)
.+|+| |.|++|++-|.|
T Consensus 16 ~Vg~v-I~n~~~~vLL~k 32 (165)
T d1jkna_ 16 NVGIC-LMNNDKKIFAAS 32 (165)
T ss_dssp EEEEE-EECTTSCEEEEE
T ss_pred cEEEE-EEeCCCEEEEEE
Confidence 45555 799999998876
No 9
>d3ddja2 d.37.1.1 (A:1-135) Uncharacterized protein SSO3205 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=15.25 E-value=29 Score=20.29 Aligned_cols=12 Identities=25% Similarity=0.614 Sum_probs=10.2
Q ss_pred Cceeeeccccce
Q psy16098 16 GAVPVLNEKGEV 27 (99)
Q Consensus 16 GAvpVrNeKge~ 27 (99)
..+||.|+.|++
T Consensus 106 ~~lpVvd~~g~l 117 (135)
T d3ddja2 106 GSLPVVDINDKP 117 (135)
T ss_dssp SEEEEECTTSCE
T ss_pred eEEEEEeCCCEE
Confidence 479999999875
No 10
>d2riha1 d.37.1.1 (A:2-132) Uncharacterized protein PAE2072 {Pyrobaculum aerophilum [TaxId: 13773]}
Probab=14.96 E-value=30 Score=20.19 Aligned_cols=11 Identities=45% Similarity=0.721 Sum_probs=9.7
Q ss_pred ceeeeccccce
Q psy16098 17 AVPVLNEKGEV 27 (99)
Q Consensus 17 AvpVrNeKge~ 27 (99)
.+||.|++|++
T Consensus 99 ~lpVvd~~g~l 109 (131)
T d2riha1 99 HVVVVNKNGEL 109 (131)
T ss_dssp EEEEECTTSCE
T ss_pred EEEEEcCCCeE
Confidence 68999999876
Done!