RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy161
(148 letters)
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase;
HET: TFC; 2.70A {Trichoplusia NI}
Length = 551
Score = 145 bits (367), Expect = 5e-42
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 82 GFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPL 141
GFLS + VPGN G++D V L+W+Q N FGG PD VT+ G+SAGAA+ +S
Sbjct: 159 GFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKA 218
Query: 142 SKG 144
+ G
Sbjct: 219 ADG 221
Score = 81.2 bits (201), Expect = 5e-19
Identities = 19/72 (26%), Positives = 29/72 (40%)
Query: 1 LFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCLRQLPTETFVTT 60
LF RAIL SGT+S ++ +T A+ F T +G E + L ++P E
Sbjct: 222 LFRRAILMSGTSSSAFFTTNPVFAQYINKLFVTNIGITATDPEEIHQKLIEMPAEKLNEA 281
Query: 61 LNKFHNILFHYS 72
+
Sbjct: 282 NRFLLEQFGLTT 293
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A
{Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A
1jmy_A
Length = 579
Score = 145 bits (368), Expect = 6e-42
Identities = 36/63 (57%), Positives = 49/63 (77%)
Query: 82 GFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPL 141
GFLS G++ +PGN G+ DQ +A+ W++ NIE FGG+PD +T+FGESAG ASVS +SP
Sbjct: 149 GFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPY 208
Query: 142 SKG 144
+KG
Sbjct: 209 NKG 211
Score = 76.6 bits (189), Expect = 2e-17
Identities = 18/70 (25%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Query: 1 LFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCLRQLPTETFVTT 60
L RAI QSG C WA A A VGCP + CL+
Sbjct: 212 LIKRAISQSGVGLCPWAIQQD--PLFWAKRIAEKVGCPVDDTSKMAGCLKITDPRALTLA 269
Query: 61 LNKFHNILFH 70
+
Sbjct: 270 YKLPLGSTEY 279
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase;
HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP:
c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A*
1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A*
2hrq_A* 3k9b_A* 1k4y_A*
Length = 542
Score = 140 bits (355), Expect = 2e-40
Identities = 38/63 (60%), Positives = 45/63 (71%)
Query: 82 GFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPL 141
GF S G+ GN G DQV AL+W+Q+NI FGGNP SVTIFGESAG SVS ++SPL
Sbjct: 158 GFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPL 217
Query: 142 SKG 144
+K
Sbjct: 218 AKN 220
Score = 77.1 bits (190), Expect = 1e-17
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 1 LFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCLRQLPTETFVTT 60
LFHRAI +SG A S + A A GC T ++ CLRQ E + T
Sbjct: 221 LFHRAISESGVALTSVLVKKGD-VKPLAEQIAITAGCKTTTSAVMVHCLRQKTEEELLET 279
Query: 61 LNKFHNILFHYS 72
K +
Sbjct: 280 TLKMKFLSLDLQ 291
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase,
neurotransmitter cleavage, catalytic triad, alpha/beta
hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP:
c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A*
1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A
1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A*
1vxr_A* ...
Length = 537
Score = 138 bits (349), Expect = 2e-39
Identities = 37/64 (57%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 82 GFLSF-GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSP 140
GFL+ G+ E PGN+G+ DQ +ALQW+ +NI+ FGG+P +VTIFGESAG ASV H++SP
Sbjct: 154 GFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSP 213
Query: 141 LSKG 144
S+
Sbjct: 214 GSRD 217
Score = 81.3 bits (201), Expect = 6e-19
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 1 LFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCLRQLPTETFVTT 60
LF RAILQSG+ +C WAS R RA + C E ++ CLR+ + +
Sbjct: 218 LFRRAILQSGSPNCPWASVSVAEGRRRAVELGRNLNCNLNSDEELIHCLREKKPQELIDV 277
Query: 61 LNKF 64
Sbjct: 278 EWNV 281
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC
MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A*
1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A*
3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A*
2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Length = 529
Score = 137 bits (348), Expect = 2e-39
Identities = 44/64 (68%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 82 GFLSF-GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSP 140
GFL+ GN E PGN+G+ DQ LALQW+Q+NI FGGNP SVT+FGESAGAASVS HL+SP
Sbjct: 152 GFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSP 211
Query: 141 LSKG 144
S
Sbjct: 212 GSHS 215
Score = 80.5 bits (199), Expect = 8e-19
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 LFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCLRQLPTETFVTT 60
LF RAILQSG+ + WA T + AR+R A L GC + ++ CLR + +
Sbjct: 216 LFTRAILQSGSFNAPWAVTSLYEARNRTLNLAKLTGCSRENETEIIKCLRNKDPQEILLN 275
Query: 61 LNKF 64
Sbjct: 276 EAFV 279
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod
glycosylated protein, hydrolase; HET: NAG FUC SCK SCU
P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A*
1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A*
2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A*
2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Length = 543
Score = 137 bits (347), Expect = 4e-39
Identities = 40/64 (62%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 82 GFLSF-GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSP 140
GFL+ G+ E PGN+G+ DQ LALQW+QENI FGG+P SVT+FGESAGAASV H++S
Sbjct: 157 GFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSL 216
Query: 141 LSKG 144
S+
Sbjct: 217 PSRS 220
Score = 76.3 bits (188), Expect = 3e-17
Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 1 LFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIET----VLDCLRQLPTET 56
LFHRA+LQSGT + WA+ A AR RA A LVGCP ++ CLR P +
Sbjct: 221 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 280
Query: 57 FVTTLNKF 64
V
Sbjct: 281 LVDHEWHV 288
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase,
cell adhesion, cell J glycoprotein, membrane,
postsynaptic cell membrane; HET: NAG; 1.80A {Rattus
norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A*
2vh8_A 3bl8_A*
Length = 574
Score = 134 bits (338), Expect = 7e-38
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 82 GFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPL 141
GFLS G+ GN G+ D + AL+W ENI FGG+P +T+FG AG + V+ +S
Sbjct: 174 GFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHY 233
Query: 142 S 142
S
Sbjct: 234 S 234
Score = 79.1 bits (195), Expect = 3e-18
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 1 LFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCLRQLPTETFVTT 60
LF RAI QSGTA SWA + A AT VGC +++CL++ P + V
Sbjct: 238 LFQRAIAQSGTALSSWAVSFQ--PAKYARILATKVGCNVSDTVELVECLQKKPYKELVDQ 295
Query: 61 LNKFHNILFHYSVV 74
+ + V
Sbjct: 296 DVQPARYHIAFGPV 309
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse,
membrane, nerve, muscle neurotransmitter degradation,
glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila
melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Length = 585
Score = 132 bits (333), Expect = 5e-37
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 7/70 (10%)
Query: 82 GFLSF-------GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVS 134
GFL E PGN+G+ DQ LA++W+++N FGGNP+ +T+FGESAG++SV+
Sbjct: 186 GFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVN 245
Query: 135 YHLVSPLSKG 144
L+SP+++G
Sbjct: 246 AQLMSPVTRG 255
Score = 73.3 bits (180), Expect = 3e-16
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 1 LFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIET----VLDCLRQLPTET 56
L R ++QSGT + W+ + A + A C ++T V+ C+R + +T
Sbjct: 256 LVKRGMMQSGTMNAPWSHMTSEKAVEIGKALINDCNCNASMLKTNPAHVMSCMRSVDAKT 315
Query: 57 FV 58
Sbjct: 316 IS 317
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase
directed evolution; 1.50A {Bacillus subtilis} SCOP:
c.69.1.1 PDB: 1c7j_A 1c7i_A
Length = 489
Score = 126 bits (319), Expect = 2e-35
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 82 GFLSF--GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVS 139
GFL + NLG+ DQ AL+W++ENI FGG+PD+VT+FGESAG S++ L
Sbjct: 142 GFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAM 201
Query: 140 PLSKG 144
P +KG
Sbjct: 202 PAAKG 206
Score = 63.5 bits (155), Expect = 8e-13
Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 8/64 (12%)
Query: 1 LFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCLRQLPTETFVTT 60
LF +AI++SG + A A AF ++G + LD L + E +
Sbjct: 207 LFQKAIMESGASRTMTKEQ----AASTAAAFLQVLGINE----SQLDRLHTVAAEDLLKA 258
Query: 61 LNKF 64
++
Sbjct: 259 ADQL 262
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase,
hydrolase; 1.58A {Geobacillus stearothermophilus} PDB:
2ogs_A
Length = 498
Score = 125 bits (315), Expect = 8e-35
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 82 GFLSFG-----NAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYH 136
GFL G GNLG+ DQV AL+W++ENI FGG+PD++TIFGESAGAASV
Sbjct: 144 GFLHLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVL 203
Query: 137 LVSPLSKG 144
L P + G
Sbjct: 204 LSLPEASG 211
Score = 63.1 bits (154), Expect = 1e-12
Identities = 15/63 (23%), Positives = 20/63 (31%), Gaps = 6/63 (9%)
Query: 1 LFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCLRQLPTETFVTT 60
LF RA+LQSG+ S S A G + L +P E +
Sbjct: 212 LFRRAMLQSGSGSLLLRSPET--AMAMTERILDKAGIRP----GDRERLLSIPAEELLRA 265
Query: 61 LNK 63
Sbjct: 266 ALS 268
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H;
HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Length = 522
Score = 120 bits (303), Expect = 5e-33
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 82 GFLSFG--NAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVS 139
GFL+ N G+ DQ AL+W+++ IE+FGG+PD + I G SAGA SV+YHL +
Sbjct: 147 GFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSA 206
Query: 140 PLSKG 144
K
Sbjct: 207 YGGKD 211
Score = 62.4 bits (152), Expect = 2e-12
Identities = 15/81 (18%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Query: 1 LFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCLRQLPTETFVTT 60
LF AI++S + + F GC + L+CLR+ T
Sbjct: 214 LFIGAIVESSFWPTQRTVSE---MEFQFERFVNDTGCSSAR--DSLECLREQDIATIQKG 268
Query: 61 LNKFHNILFHYSVVKNSLLFP 81
S + + P
Sbjct: 269 NTGSPFPGGSSSPLPDWYFLP 289
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A
{Galactomyces geotrichum} SCOP: c.69.1.17
Length = 544
Score = 117 bits (296), Expect = 4e-32
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 82 GFLSFG--NAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVS 139
GFL AE N G+ DQ L+W+ +NI FGG+PD V IFGESAGA SV++ L++
Sbjct: 170 GFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIA 229
Query: 140 ------PLSKG 144
K
Sbjct: 230 YGGDNTYNGKK 240
Score = 63.6 bits (155), Expect = 7e-13
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 1 LFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQP-IETVLDCLRQLPTETFVT 59
LFH AILQSG + + + + FA GC T L+CLR +
Sbjct: 241 LFHSAILQSGGPL-PYHDSSSVGPDISYNRFAQYAGCDTSASANDTLECLRSKSSSVLHD 299
Query: 60 TLNKF 64
N +
Sbjct: 300 AQNSY 304
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester
acylh hydrolase; HET: NAG F23; 1.40A {Candida
cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A*
1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A*
1gz7_A*
Length = 534
Score = 116 bits (293), Expect = 1e-31
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
Query: 82 GFLSFG--NAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLV- 138
GFL+ AE GN G+KDQ L +QW+ +NI FGG+P VTIFGESAG+ SV HL+
Sbjct: 162 GFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIW 221
Query: 139 -----SPLSKG 144
+ K
Sbjct: 222 NDGDNTYKGKP 232
Score = 63.6 bits (155), Expect = 6e-13
Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Query: 1 LFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCLRQLPTETFVTT 60
LF I+QSG S + + F + GC + L CLR ++T +
Sbjct: 233 LFRAGIMQSGAMVPSDPVDGTY-GNEIYDLFVSSAGCGSAS--DKLACLRSASSDTLLDA 289
Query: 61 LNKFHNILFHYSV 73
N L + S+
Sbjct: 290 TNNTPGFLAYSSL 302
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE;
2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Length = 311
Score = 41.1 bits (97), Expect = 3e-05
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Query: 103 ALQWIQENIEEFGGNPDSVTIFGESAG---AASVS 134
A +W+ EN EE +P + + G+SAG AA+VS
Sbjct: 136 ATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVS 170
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A
{Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A
1qz3_A
Length = 310
Score = 41.1 bits (97), Expect = 3e-05
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 103 ALQWIQENIEEFGGNPDSVTIFGESAG---AASVS 134
ALQWI E +F +P + + G+SAG AA S
Sbjct: 131 ALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTS 165
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme,
hydrolase, HSL, alpha/beta hydrolase fold; 2.3A
{Uncultured archaeon}
Length = 311
Score = 41.1 bits (97), Expect = 4e-05
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Query: 103 ALQWIQENIEEFGGNPDSVTIFGESAG---AASVS 134
AL+W+ + +E G +PD + + G+SAG AA VS
Sbjct: 130 ALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVS 164
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary
alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A
3zwq_A
Length = 313
Score = 40.7 bits (96), Expect = 5e-05
Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 103 ALQWIQENIEEFGGNPDSVTIFGESAG---AASVS 134
A +W+ +N ++ G + + + G+SAG AA +
Sbjct: 133 AAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTA 167
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine
structural genomics, center for structural genomics of
INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella
typhimurium}
Length = 326
Score = 40.7 bits (96), Expect = 6e-05
Identities = 8/38 (21%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 103 ALQWIQENIEEFGGNPDSVTIFGESAG---AASVSYHL 137
+ ++ +E+ N + + G+SAG A + + L
Sbjct: 144 VCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWL 181
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP:
c.69.1.2 PDB: 1lzk_A
Length = 323
Score = 39.2 bits (92), Expect = 2e-04
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 103 ALQWIQENIEEFGGNPDSVTIFGESAG---AASVS 134
AL +I + EE G +P + + G+SAG AA
Sbjct: 136 ALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTV 170
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural
genomics CEN infectious disease, tuberculosis, O LIPW,
heroin esterase; 1.75A {Mycobacterium marinum}
Length = 317
Score = 38.8 bits (91), Expect = 2e-04
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Query: 103 ALQWIQENIEEFGGNPDSVTIFGESAG---AASVS 134
L W+ N G + + + G SAG AA ++
Sbjct: 142 VLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLA 176
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2,
protein structure initiative; 3.20A {Lactococcus lactis
subsp}
Length = 276
Score = 37.5 bits (87), Expect = 8e-04
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Query: 103 ALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPL 141
I +N +E+ NP+ V + G SAG HL +
Sbjct: 103 VFSLIHQNHKEWQINPEQVFLLGCSAGG-----HLAAWY 136
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural
genomics, joint center structural genomics, JCSG; HET:
EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Length = 277
Score = 37.1 bits (86), Expect = 8e-04
Identities = 8/40 (20%), Positives = 15/40 (37%), Gaps = 5/40 (12%)
Query: 103 ALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLS 142
+ WI + + + G SAG H+V+ +
Sbjct: 93 TIDWITTQASAHHVDCQRIILAGFSAGG-----HVVATYN 127
>3bjr_A Putative carboxylesterase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Length = 283
Score = 36.8 bits (85), Expect = 0.001
Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 103 ALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLS 142
A+ ++++ E+ +P +T G S G H+V+ +
Sbjct: 108 AVNLLRQHAAEWHIDPQQITPAGFSVGG-----HIVALYN 142
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic,
dimer, archaea, R267G, hydro; 1.65A {Sulfolobus
tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Length = 323
Score = 35.7 bits (83), Expect = 0.003
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 103 ALQWIQENIEEFGGNPDSVTIFGESAG---AASVS 134
AL+W+ N E+F G + + G+SAG AA +
Sbjct: 147 ALKWVYNNSEKFNG-KYGIAVGGDSAGGNLAAVTA 180
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO
PSI-2, protein structure initiative, midwest center for
STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Length = 274
Score = 34.8 bits (80), Expect = 0.005
Identities = 8/42 (19%), Positives = 12/42 (28%), Gaps = 7/42 (16%)
Query: 99 DQVLALQWIQENIEEFGGNPDSVTIFGESAG---AASVSYHL 137
Q + E S + G SAG ++ L
Sbjct: 80 TLTETFQLLNEE----IIQNQSFGLCGRSAGGYLMLQLTKQL 117
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A,
alpha/beta hydrolase family; 1.85A {Bacillus subtilis}
SCOP: c.69.1.2
Length = 361
Score = 34.0 bits (78), Expect = 0.012
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 103 ALQWIQENIEEFGGNPDSVTIFGESAGA 130
A+ W+ E+ E G + V + GES G
Sbjct: 171 AVLWVDEHRESLGLSG--VVVQGESGGG 196
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor,
gibberellin, gibberellin signaling pathway, hydrolase,
nucleus, receptor, developmental protein; HET: GA3;
1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Length = 351
Score = 32.4 bits (74), Expect = 0.036
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Query: 103 ALQWIQENIEEFGGNPDSVTIF--GESAGA 130
AL W+ V IF G+S+G
Sbjct: 172 ALNWVNSRSWLKSKKDSKVHIFLAGDSSGG 201
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia
eriantha} PDB: 2o7v_A
Length = 338
Score = 31.2 bits (71), Expect = 0.10
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 99 DQVLALQWIQENIEEF---GGNPDSVTIFGESAGA 130
D + ALQWI+++ +E+ + + I GESAG
Sbjct: 138 DAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGG 172
>1vkh_A Putative serine hydrolase; structural genomics, joint center
structural genomics, JCSG, protein structure initiative,
PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae}
SCOP: c.69.1.32
Length = 273
Score = 29.6 bits (66), Expect = 0.32
Identities = 6/34 (17%), Positives = 13/34 (38%), Gaps = 5/34 (14%)
Query: 97 MKDQVLALQWIQENIEEFGGNPDSVTIFGESAGA 130
+ D V + + + ++ + G S GA
Sbjct: 97 LYDAVSNITRLVKE-----KGLTNINMVGHSVGA 125
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase,
gibberellin signaling pathway, hydrolase, nucleus,
hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp}
PDB: 3ed1_A*
Length = 365
Score = 29.7 bits (67), Expect = 0.36
Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 103 ALQWIQEN--IEEFGGNPDSVTIFGESAGA 130
AL+W+ + G V + G+S+G
Sbjct: 171 ALKWVMSQPFMRSGGDAQARVFLSGDSSGG 200
>3h04_A Uncharacterized protein; protein with unknown function, structural
genomics, MCSG, PS protein structure initiative; 1.90A
{Staphylococcus aureus subsp}
Length = 275
Score = 29.1 bits (65), Expect = 0.56
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Query: 90 EVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGA 130
EV + ++D + IQ + + FG S+GA
Sbjct: 72 EVSLDCIIEDVYASFDAIQSQY-----SNCPIFTFGRSSGA 107
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 29.1 bits (64), Expect = 0.56
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 35/95 (36%)
Query: 46 LDCLRQLPTETFVTTLNK-FHNIL-----FHYSVVKNSLLFPGFLSFGNAEVPGNLGMKD 99
L C + +TT K + L H S+ +S+ D
Sbjct: 264 LSC------KILLTTRFKQVTDFLSAATTTHISLDHHSMTL----------------TPD 301
Query: 100 QVLAL--QWIQENIEEF-----GGNPDSVTIFGES 127
+V +L +++ ++ NP ++I ES
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES 336
Score = 28.3 bits (62), Expect = 1.1
Identities = 18/102 (17%), Positives = 29/102 (28%), Gaps = 19/102 (18%)
Query: 40 QPIETVLDCLRQLPTETFV----------TTLNKFHNILFHYSVVKNSLLFPG--F-LSF 86
QP + L +L V T + ++ Y V F L+
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVAL--DVCLSYKVQCK---MDFKIFWLNL 189
Query: 87 GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESA 128
N P + Q L Q I N + ++ + S
Sbjct: 190 KNCNSPETVLEMLQKLLYQ-IDPNWTSRSDHSSNIKLRIHSI 230
Score = 27.1 bits (59), Expect = 2.7
Identities = 17/113 (15%), Positives = 29/113 (25%), Gaps = 46/113 (40%)
Query: 31 FATLVGCPTQ--PIETV--------------------LDCLRQLPTETFVTTLNKFHNIL 68
+ C Q P E + D + + + T + N+L
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366
Query: 69 --------FHYSVVKNSLLFPGFLSFGNAEVPGNLGMKDQVLALQWIQENIEE 113
F V FP +A +P +L+L W +
Sbjct: 367 EPAEYRKMFDRLSV-----FPP-----SAHIP------TILLSLIWFDVIKSD 403
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured
bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A*
3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Length = 322
Score = 28.0 bits (63), Expect = 1.3
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Query: 99 DQVLALQWIQENIEEFGGNPDSVTIFGESAG---AASVSYHL 137
D V A +W+ + G P ++I G+SAG +V
Sbjct: 133 DGVAAYRWLLDQ----GFKPQHLSISGDSAGGGLVLAVLVSA 170
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured
bacterium} PDB: 3dnm_A
Length = 322
Score = 27.7 bits (62), Expect = 1.4
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 7/42 (16%)
Query: 99 DQVLALQWIQENIEEFGGNPDSVTIFGESAG---AASVSYHL 137
D V A + + + G+ D + I G+SAG +
Sbjct: 133 DCVAAYRALLKT----AGSADRIIIAGDSAGGGLTTASMLKA 170
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold,
structural genomics, joint cente structural genomics,
JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Length = 262
Score = 26.4 bits (58), Expect = 3.4
Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 6/44 (13%)
Query: 97 MKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSP 140
+ A+ + + + G SAG V+ L
Sbjct: 113 TQQISQAVTAAAKE------IDGPIVLAGHSAGGHLVARMLDPE 150
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 128
Score = 26.0 bits (57), Expect = 4.1
Identities = 5/17 (29%), Positives = 10/17 (58%)
Query: 104 LQWIQENIEEFGGNPDS 120
+ WIQ+N+ P++
Sbjct: 111 VLWIQQNLRHILSQPET 127
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase
family S9, hydrolase; 2.80A {Stenotrophomonas
maltophilia}
Length = 741
Score = 25.8 bits (57), Expect = 6.5
Identities = 8/39 (20%), Positives = 19/39 (48%), Gaps = 7/39 (17%)
Query: 93 GNLGMKDQVLALQWIQEN--IEEFGGNPDSVTIFGESAG 129
G + + DQ+ + W+++ + +P + + G S G
Sbjct: 579 GTVEVADQLRGVAWLKQQPWV-----DPARIGVQGWSNG 612
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.135 0.423
Gapped
Lambda K H
0.267 0.0805 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,208,627
Number of extensions: 116777
Number of successful extensions: 324
Number of sequences better than 10.0: 1
Number of HSP's gapped: 307
Number of HSP's successfully gapped: 55
Length of query: 148
Length of database: 6,701,793
Length adjustment: 85
Effective length of query: 63
Effective length of database: 4,328,508
Effective search space: 272696004
Effective search space used: 272696004
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.0 bits)