RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy161
(148 letters)
>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver
carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]}
Length = 532
Score = 51.3 bits (121), Expect = 6e-09
Identities = 39/72 (54%), Positives = 48/72 (66%)
Query: 73 VVKNSLLFPGFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAAS 132
++ L GF S G+ GN G DQV AL+W+Q+NI FGGNP SVTIFGESAG S
Sbjct: 147 TIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGES 206
Query: 133 VSYHLVSPLSKG 144
VS ++SPL+K
Sbjct: 207 VSVLVLSPLAKN 218
Score = 37.0 bits (84), Expect = 4e-04
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 1 LFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCLRQLPTETFVTT 60
LFHRAI +SG A S + A A GC T ++ CLRQ E + T
Sbjct: 219 LFHRAISESGVALTSVLVKKGD-VKPLAEQIAITAGCKTTTSAVMVHCLRQKTEEELLET 277
Query: 61 LNKFHNILFHYS 72
K +
Sbjct: 278 TLKMKFLSLDLQ 289
>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 571
Score = 50.1 bits (118), Expect = 1e-08
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 70 HYSVVKNSLLFPGFLSF-------GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVT 122
+ + + GFL E PGN+G+ DQ LA++W+++N FGGNP+ +T
Sbjct: 172 IVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMT 231
Query: 123 IFGESAGAASVSYHLVSPLSKGNCN 147
+FGESAG++SV+ L+SP+++G
Sbjct: 232 LFGESAGSSSVNAQLMSPVTRGLVK 256
>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida
cylindracea, cholesterol esterase [TaxId: 44322]}
Length = 534
Score = 47.5 bits (111), Expect = 1e-07
Identities = 28/57 (49%), Positives = 35/57 (61%)
Query: 92 PGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLSKGNCNY 148
GN G+KDQ L +QW+ +NI FGG+P VTIFGESAG+ SV HL+
Sbjct: 174 SGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKG 230
>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId:
5061]}
Length = 517
Score = 43.6 bits (101), Expect = 3e-06
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 61 LNKFHNILFHYSVVKNSLLFPGFLSFGNAEVPG--NLGMKDQVLALQWIQENIEEFGGNP 118
+ + + + + + GFL+ G N G+ DQ AL+W+++ IE+FGG+P
Sbjct: 121 VIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDP 180
Query: 119 DSVTIFGESAGAASVSYHLVSP 140
D + I G SAGA SV+YHL +
Sbjct: 181 DHIVIHGVSAGAGSVAYHLSAY 202
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB
esterase) {Bacillus subtilis [TaxId: 1423]}
Length = 483
Score = 42.8 bits (99), Expect = 5e-06
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 67 ILFHYSVVKNSLLFPGFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGE 126
I+ + F SF + NLG+ DQ AL+W++ENI FGG+PD+VT+FGE
Sbjct: 129 IVVTLNYRLGPFGFLHLSSF-DEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGE 187
Query: 127 SAGAASVSYHLVSPLSKGNCNY 148
SAG S++ L P +KG
Sbjct: 188 SAGGMSIAALLAMPAAKGLFQK 209
>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 542
Score = 41.3 bits (95), Expect = 2e-05
Identities = 37/62 (59%), Positives = 46/62 (74%)
Query: 85 SFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLSKG 144
G+ E PGN+G+ DQ LALQW+QENI FGG+P SVT+FGESAGAASV H++S S+
Sbjct: 161 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRS 220
Query: 145 NC 146
Sbjct: 221 LF 222
Score = 33.9 bits (76), Expect = 0.005
Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 2 FHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPI----ETVLDCLRQLPTETF 57
FHRA+LQSGT + WA+ A AR RA A LVGCP ++ CLR P +
Sbjct: 222 FHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQDL 281
Query: 58 VTTLNKF 64
V
Sbjct: 282 VDHEWHV 288
>d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 526
Score = 39.7 bits (91), Expect = 5e-05
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 2 FHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCLRQLPTETFV 58
F RAILQSG+ + WA T + AR+R A L GC + ++ CLR + +
Sbjct: 214 FTRAILQSGSFNAPWAVTSLYEARNRTLNLAKLTGCSRENETEIIKCLRNKDPQEIL 270
>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray
(Torpedo californica) [TaxId: 7787]}
Length = 532
Score = 37.0 bits (84), Expect = 5e-04
Identities = 20/64 (31%), Positives = 28/64 (43%)
Query: 2 FHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCLRQLPTETFVTTL 61
F RAILQSG+ +C WAS R RA + C E ++ CLR+ + +
Sbjct: 216 FRRAILQSGSPNCPWASVSVAEGRRRAVELGRNLNCNLNSDEELIHCLREKKPQELIDVE 275
Query: 62 NKFH 65
Sbjct: 276 WNVL 279
>d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId:
1831]}
Length = 317
Score = 34.8 bits (78), Expect = 0.002
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 105 QWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLSKGNCNY 148
+I + EE G +P + + G+SAG + ++ +G
Sbjct: 137 LYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPV 180
>d1k0ma1 a.45.1.1 (A:92-240) Chloride intracellular channel 1
(clic1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 149
Score = 27.8 bits (61), Expect = 0.41
Identities = 9/67 (13%), Positives = 16/67 (23%), Gaps = 2/67 (2%)
Query: 12 ASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCLRQLPTETFVTTLNKFHNILFHY 71
A C+ + + + + L F +T I Y
Sbjct: 85 ADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREE--FASTCPDDEEIELAY 142
Query: 72 SVVKNSL 78
V +L
Sbjct: 143 EQVAKAL 149
>d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase
{Penicillium funiculosum [TaxId: 28572]}
Length = 318
Score = 25.8 bits (56), Expect = 2.2
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 111 IEEFGGNPDSVTIFGESAGAA 131
+ F NP+SV++ G ++G
Sbjct: 3 LPAFNVNPNSVSVSGLASGGY 23
>d2dmya1 d.50.1.1 (A:8-91) Spermatid perinuclear RNA-binding
protein {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 24.4 bits (53), Expect = 2.5
Identities = 6/40 (15%), Positives = 13/40 (32%)
Query: 44 TVLDCLRQLPTETFVTTLNKFHNILFHYSVVKNSLLFPGF 83
L+ +R ++ H +F SV + +
Sbjct: 16 MRLNQIRPGLQYKLLSQSGPVHAPVFTMSVDVDGTTYEAS 55
>g1h8d.1 b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [TaxId:
9606]}
Length = 289
Score = 25.4 bits (54), Expect = 2.7
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 82 GFLSFGNA-EVPGNLGMKDQVLA-LQWIQENIEEFGGNPDSVTIF 124
G +S+G + G G V +WIQ+ I++FG + SV I
Sbjct: 245 GIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGCS--SVLIV 287
>d2ivxa1 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 143
Score = 24.6 bits (53), Expect = 4.2
Identities = 6/28 (21%), Positives = 10/28 (35%)
Query: 51 QLPTETFVTTLNKFHNILFHYSVVKNSL 78
+ T T + H H+S K +
Sbjct: 46 NVSQLTINTAIVYMHRFYMHHSFTKFNK 73
>d2ijra1 e.66.1.1 (A:3-282) Hypothetical protein api92 {Yersinia
pseudotuberculosis [TaxId: 633]}
Length = 280
Score = 24.4 bits (53), Expect = 6.9
Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Query: 3 HRAILQSGTASCSWASTPAWLARDR 27
R LQSG AS W + P AR
Sbjct: 101 DRIYLQSGIASVKWETIPE-GARQI 124
>d1jkwa1 a.74.1.1 (A:11-161) Cyclin H (mcs2) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 151
Score = 23.8 bits (51), Expect = 8.7
Identities = 5/28 (17%), Positives = 9/28 (32%)
Query: 51 QLPTETFVTTLNKFHNILFHYSVVKNSL 78
+P T F + SV++
Sbjct: 64 AMPRSVVGTACMYFKRFYLNNSVMEYHP 91
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.135 0.423
Gapped
Lambda K H
0.267 0.0399 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 538,281
Number of extensions: 22151
Number of successful extensions: 81
Number of sequences better than 10.0: 1
Number of HSP's gapped: 81
Number of HSP's successfully gapped: 20
Length of query: 148
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 71
Effective length of database: 1,350,386
Effective search space: 95877406
Effective search space used: 95877406
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)