Query psy16105
Match_columns 130
No_of_seqs 122 out of 701
Neff 7.5
Searched_HMMs 46136
Date Fri Aug 16 21:00:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16105.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16105hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2816|consensus 99.6 1.6E-15 3.5E-20 125.3 6.1 107 11-117 257-407 (463)
2 PRK10054 putative transporter; 98.4 1.2E-05 2.5E-10 64.6 13.9 108 14-125 26-177 (395)
3 PF11700 ATG22: Vacuole efflux 98.4 2.1E-06 4.6E-11 71.4 9.1 80 46-127 386-465 (477)
4 PRK11646 multidrug resistance 98.3 1.6E-05 3.5E-10 63.8 13.2 108 15-126 30-181 (400)
5 cd06174 MFS The Major Facilita 98.3 1.3E-05 2.8E-10 60.9 11.2 114 12-128 192-350 (352)
6 TIGR00893 2A0114 d-galactonate 98.2 2.7E-05 5.9E-10 59.9 11.7 70 57-128 328-397 (399)
7 PF07690 MFS_1: Major Facilita 98.2 2.7E-05 5.9E-10 59.6 11.4 102 21-125 22-167 (352)
8 TIGR00893 2A0114 d-galactonate 98.2 6.7E-05 1.5E-09 57.7 12.6 104 18-124 16-163 (399)
9 PRK03545 putative arabinose tr 98.1 8.8E-05 1.9E-09 58.9 12.8 101 21-124 34-178 (390)
10 PRK10213 nepI ribonucleoside t 98.1 9.5E-05 2.1E-09 59.3 12.7 97 23-122 47-187 (394)
11 TIGR02718 sider_RhtX_FptX side 98.1 6E-05 1.3E-09 59.8 11.1 70 54-126 317-387 (390)
12 PRK11646 multidrug resistance 98.1 7.1E-05 1.5E-09 60.1 11.5 75 53-127 310-385 (400)
13 TIGR00900 2A0121 H+ Antiporter 98.0 0.00026 5.5E-09 54.4 13.2 70 53-125 105-174 (365)
14 TIGR00924 yjdL_sub1_fam amino 98.0 5.1E-05 1.1E-09 62.7 9.7 115 11-128 26-190 (475)
15 PRK10489 enterobactin exporter 98.0 0.00024 5.2E-09 56.9 13.3 90 13-102 241-374 (417)
16 TIGR00899 2A0120 sugar efflux 98.0 4.4E-05 9.5E-10 59.4 8.7 112 11-125 13-171 (375)
17 TIGR00710 efflux_Bcr_CflA drug 98.0 0.0002 4.3E-09 55.8 12.4 102 22-126 31-176 (385)
18 TIGR02332 HpaX 4-hydroxyphenyl 98.0 0.00023 4.9E-09 57.4 12.7 103 18-121 30-180 (412)
19 PRK11195 lysophospholipid tran 98.0 0.00026 5.7E-09 56.7 12.8 69 51-123 99-167 (393)
20 PRK11663 regulatory protein Uh 97.9 0.00027 5.8E-09 57.2 12.6 97 21-120 48-188 (434)
21 TIGR00900 2A0121 H+ Antiporter 97.9 0.00015 3.2E-09 55.7 10.5 87 16-102 232-363 (365)
22 PRK11102 bicyclomycin/multidru 97.9 0.00039 8.4E-09 54.4 13.0 98 23-123 18-159 (377)
23 KOG2615|consensus 97.9 2E-05 4.4E-10 64.4 5.6 94 11-104 277-416 (451)
24 cd06174 MFS The Major Facilita 97.9 0.00028 6.2E-09 53.5 11.3 105 17-125 21-169 (352)
25 PRK11551 putative 3-hydroxyphe 97.8 0.00048 1E-08 54.6 12.3 72 55-128 323-394 (406)
26 PRK05122 major facilitator sup 97.8 0.00034 7.5E-09 55.4 11.3 87 16-102 36-174 (399)
27 PRK12382 putative transporter; 97.8 0.00068 1.5E-08 53.7 12.8 87 16-102 36-174 (392)
28 PF07690 MFS_1: Major Facilita 97.8 0.00012 2.6E-09 56.0 8.2 81 13-93 224-352 (352)
29 PRK10091 MFS transport protein 97.8 0.00055 1.2E-08 54.3 12.0 100 21-123 28-171 (382)
30 PRK11551 putative 3-hydroxyphe 97.8 0.00071 1.5E-08 53.6 12.5 98 21-121 40-181 (406)
31 PRK11902 ampG muropeptide tran 97.8 0.0012 2.5E-08 52.8 13.7 74 50-125 104-177 (402)
32 TIGR00901 2A0125 AmpG-related 97.8 0.0013 2.8E-08 51.3 13.6 77 51-127 94-175 (356)
33 TIGR00881 2A0104 phosphoglycer 97.8 8.5E-05 1.8E-09 57.2 6.8 103 18-122 17-163 (379)
34 TIGR00891 2A0112 putative sial 97.8 0.00028 6.1E-09 55.1 9.7 88 15-102 258-390 (405)
35 TIGR00891 2A0112 putative sial 97.8 0.0012 2.5E-08 51.6 13.0 102 20-122 36-181 (405)
36 PRK15011 sugar efflux transpor 97.7 0.0014 3E-08 52.3 13.5 109 14-125 34-189 (393)
37 TIGR00895 2A0115 benzoate tran 97.7 0.00031 6.7E-09 54.6 9.5 83 20-102 41-167 (398)
38 TIGR00711 efflux_EmrB drug res 97.7 0.00052 1.1E-08 55.5 10.9 83 19-101 25-151 (485)
39 PF05977 MFS_3: Transmembrane 97.7 0.00059 1.3E-08 57.6 11.4 79 46-127 109-187 (524)
40 TIGR00890 2A0111 Oxalate/Forma 97.7 0.00048 1E-08 53.0 10.1 64 57-123 312-375 (377)
41 PRK03633 putative MFS family t 97.7 0.0022 4.7E-08 50.8 13.8 72 54-128 299-370 (381)
42 PRK10489 enterobactin exporter 97.7 0.0013 2.9E-08 52.5 12.4 70 54-126 124-193 (417)
43 TIGR00894 2A0114euk Na(+)-depe 97.7 0.00055 1.2E-08 55.6 10.2 64 54-119 145-208 (465)
44 PRK03545 putative arabinose tr 97.6 0.0026 5.6E-08 50.4 13.5 105 18-126 228-376 (390)
45 PRK11128 putative 3-phenylprop 97.6 0.0016 3.5E-08 51.7 12.2 109 13-127 223-376 (382)
46 TIGR00902 2A0127 phenyl propri 97.6 0.0016 3.5E-08 51.7 12.0 111 9-125 219-374 (382)
47 TIGR00892 2A0113 monocarboxyla 97.6 0.00057 1.2E-08 55.9 9.6 68 54-123 347-414 (455)
48 PF05977 MFS_3: Transmembrane 97.6 0.0023 4.9E-08 54.1 13.3 112 13-127 236-391 (524)
49 TIGR00889 2A0110 nucleoside tr 97.6 0.0016 3.4E-08 52.9 11.9 70 55-124 323-396 (418)
50 TIGR00897 2A0118 polyol permea 97.6 0.0036 7.7E-08 50.1 13.8 65 61-129 336-400 (402)
51 PRK03699 putative transporter; 97.6 0.0021 4.6E-08 51.2 12.4 102 22-125 33-178 (394)
52 COG2270 Permeases of the major 97.6 0.00058 1.3E-08 56.4 9.1 94 16-109 273-410 (438)
53 PRK03893 putative sialic acid 97.6 0.00084 1.8E-08 54.7 10.1 88 15-102 295-428 (496)
54 PRK10504 putative transporter; 97.6 0.0023 4.9E-08 51.9 12.4 67 54-123 112-178 (471)
55 TIGR00880 2_A_01_02 Multidrug 97.6 0.0014 2.9E-08 43.2 9.3 75 49-126 60-134 (141)
56 KOG2532|consensus 97.5 0.0012 2.6E-08 55.0 10.6 65 53-119 141-206 (466)
57 TIGR01299 synapt_SV2 synaptic 97.5 0.003 6.6E-08 55.5 13.4 76 50-129 658-733 (742)
58 PRK06814 acylglycerophosphoeth 97.5 0.0011 2.3E-08 59.8 10.8 91 12-102 242-396 (1140)
59 TIGR00881 2A0104 phosphoglycer 97.5 0.001 2.3E-08 51.2 9.5 90 13-102 234-372 (379)
60 PRK03633 putative MFS family t 97.5 0.0039 8.4E-08 49.4 12.9 87 15-102 26-156 (381)
61 TIGR00895 2A0115 benzoate tran 97.5 0.0015 3.3E-08 50.7 10.1 49 51-99 349-397 (398)
62 TIGR00903 2A0129 major facilit 97.5 0.0053 1.1E-07 49.2 13.3 58 59-119 97-154 (368)
63 PRK03893 putative sialic acid 97.5 0.0042 9E-08 50.6 12.9 83 19-101 43-169 (496)
64 TIGR00885 fucP L-fucose:H+ sym 97.5 0.0058 1.3E-07 49.5 13.5 89 14-102 21-156 (410)
65 PRK09556 uhpT sugar phosphate 97.4 0.00058 1.3E-08 55.8 7.6 65 54-119 136-201 (467)
66 TIGR00886 2A0108 nitrite extru 97.4 0.0055 1.2E-07 47.5 12.7 83 18-101 24-151 (366)
67 TIGR00899 2A0120 sugar efflux 97.4 0.0082 1.8E-07 46.6 13.7 71 54-128 302-372 (375)
68 PRK12307 putative sialic acid 97.4 0.0038 8.1E-08 49.8 12.0 80 22-101 44-167 (426)
69 PRK09874 drug efflux system pr 97.4 0.0033 7.1E-08 49.6 11.5 74 51-127 322-395 (408)
70 TIGR00788 fbt folate/biopterin 97.4 0.0017 3.7E-08 53.7 10.1 60 55-114 366-428 (468)
71 PRK10473 multidrug efflux syst 97.4 0.0046 9.9E-08 48.9 12.3 66 53-121 104-169 (392)
72 PRK05122 major facilitator sup 97.4 0.0061 1.3E-07 48.3 12.7 72 53-127 315-386 (399)
73 TIGR00890 2A0111 Oxalate/Forma 97.4 0.0063 1.4E-07 46.7 12.2 103 17-123 24-170 (377)
74 PRK09874 drug efflux system pr 97.4 0.0086 1.9E-07 47.2 13.1 66 57-125 123-188 (408)
75 PRK11043 putative transporter; 97.4 0.0072 1.6E-07 47.9 12.7 101 22-125 32-176 (401)
76 PRK10213 nepI ribonucleoside t 97.3 0.01 2.2E-07 47.6 13.5 62 54-119 319-380 (394)
77 PRK09705 cynX putative cyanate 97.3 0.0052 1.1E-07 49.1 11.7 81 21-102 34-158 (393)
78 PRK15402 multidrug efflux syst 97.3 0.0082 1.8E-07 47.8 12.7 67 55-124 116-182 (406)
79 TIGR00883 2A0106 metabolite-pr 97.3 0.0024 5.2E-08 49.4 9.4 50 54-103 326-376 (394)
80 PRK14995 methyl viologen resis 97.3 0.0084 1.8E-07 49.5 13.1 71 51-124 105-176 (495)
81 PRK08633 2-acyl-glycerophospho 97.3 0.0074 1.6E-07 54.1 13.6 87 15-101 252-383 (1146)
82 PRK11010 ampG muropeptide tran 97.3 0.013 2.8E-07 48.6 14.2 72 54-128 330-401 (491)
83 PRK11195 lysophospholipid tran 97.3 0.011 2.4E-07 47.3 13.0 102 15-118 225-370 (393)
84 PRK12382 putative transporter; 97.2 0.0043 9.4E-08 49.1 10.2 71 54-127 316-386 (392)
85 PRK15011 sugar efflux transpor 97.2 0.018 4E-07 45.8 13.8 64 59-126 324-387 (393)
86 TIGR00806 rfc RFC reduced fola 97.2 0.0097 2.1E-07 50.2 12.4 115 11-127 41-200 (511)
87 PRK09528 lacY galactoside perm 97.2 0.00085 1.8E-08 53.8 6.0 109 12-126 27-187 (420)
88 TIGR00879 SP MFS transporter, 97.2 0.0045 9.7E-08 49.0 10.1 66 58-126 401-466 (481)
89 PRK15402 multidrug efflux syst 97.2 0.0077 1.7E-07 47.9 11.4 47 57-104 326-372 (406)
90 PRK03699 putative transporter; 97.2 0.018 3.9E-07 45.8 13.5 106 15-124 225-374 (394)
91 PRK09705 cynX putative cyanate 97.2 0.017 3.6E-07 46.2 13.1 112 13-127 223-378 (393)
92 PRK11652 emrD multidrug resist 97.2 0.016 3.6E-07 45.8 12.9 97 21-120 33-173 (394)
93 TIGR00897 2A0118 polyol permea 97.2 0.0056 1.2E-07 48.9 10.3 46 57-102 122-168 (402)
94 PRK10207 dipeptide/tripeptide 97.1 0.0072 1.6E-07 50.4 10.8 112 11-125 30-189 (489)
95 TIGR00712 glpT glycerol-3-phos 97.1 0.016 3.4E-07 46.9 12.4 67 55-123 133-199 (438)
96 TIGR00711 efflux_EmrB drug res 97.0 0.013 2.9E-07 47.3 11.1 88 15-102 275-410 (485)
97 PRK10504 putative transporter; 96.9 0.039 8.5E-07 44.7 13.3 50 53-102 366-415 (471)
98 PRK11273 glpT sn-glycerol-3-ph 96.9 0.044 9.4E-07 44.6 13.5 63 62-127 369-432 (452)
99 PRK09584 tppB putative tripept 96.9 0.015 3.3E-07 48.4 10.9 110 12-124 38-195 (500)
100 KOG4686|consensus 96.9 0.0047 1E-07 49.6 7.3 111 17-127 286-440 (459)
101 TIGR00901 2A0125 AmpG-related 96.9 0.0059 1.3E-07 47.6 8.0 33 54-86 323-355 (356)
102 PRK11128 putative 3-phenylprop 96.9 0.012 2.6E-07 46.6 9.7 65 54-123 108-172 (382)
103 PRK15403 multidrug efflux syst 96.9 0.039 8.3E-07 44.6 12.6 69 54-125 118-186 (413)
104 TIGR00896 CynX cyanate transpo 96.9 0.021 4.6E-07 44.5 10.8 88 16-104 218-350 (355)
105 PRK11902 ampG muropeptide tran 96.9 0.07 1.5E-06 42.6 14.0 68 56-126 319-386 (402)
106 PRK09556 uhpT sugar phosphate 96.9 0.05 1.1E-06 44.5 13.3 65 63-128 372-447 (467)
107 PRK11663 regulatory protein Uh 96.8 0.041 8.8E-07 44.6 12.4 57 62-121 359-415 (434)
108 PRK15462 dipeptide/tripeptide 96.8 0.023 5E-07 47.8 11.0 113 11-126 25-185 (493)
109 PRK11273 glpT sn-glycerol-3-ph 96.8 0.042 9.2E-07 44.7 12.4 67 54-122 134-200 (452)
110 TIGR00896 CynX cyanate transpo 96.8 0.034 7.5E-07 43.3 11.3 83 19-102 23-148 (355)
111 TIGR00882 2A0105 oligosacchari 96.7 0.0029 6.2E-08 50.3 5.2 109 11-125 18-178 (396)
112 TIGR00902 2A0127 phenyl propri 96.7 0.023 5.1E-07 45.1 10.3 58 56-118 110-167 (382)
113 PRK10077 xylE D-xylose transpo 96.7 0.043 9.4E-07 44.4 11.6 69 55-124 135-209 (479)
114 TIGR00892 2A0113 monocarboxyla 96.6 0.034 7.4E-07 45.5 10.9 66 55-124 123-188 (455)
115 TIGR00898 2A0119 cation transp 96.6 0.036 7.8E-07 45.3 11.0 68 53-126 193-260 (505)
116 PRK14995 methyl viologen resis 96.6 0.03 6.4E-07 46.3 10.5 88 15-102 279-413 (495)
117 TIGR00879 SP MFS transporter, 96.5 0.071 1.5E-06 42.1 11.8 43 54-96 141-183 (481)
118 PRK12307 putative sialic acid 96.5 0.038 8.3E-07 44.0 10.1 44 59-102 340-383 (426)
119 PTZ00207 hypothetical protein; 96.5 0.11 2.4E-06 44.7 13.4 65 55-124 135-199 (591)
120 TIGR00710 efflux_Bcr_CflA drug 96.5 0.15 3.2E-06 39.6 13.1 40 57-97 317-356 (385)
121 TIGR00924 yjdL_sub1_fam amino 96.5 0.026 5.6E-07 46.7 9.3 54 48-101 389-442 (475)
122 PRK06814 acylglycerophosphoeth 96.4 0.019 4E-07 51.9 8.8 55 48-102 116-170 (1140)
123 PRK11652 emrD multidrug resist 96.4 0.13 2.7E-06 40.7 12.7 48 54-102 313-360 (394)
124 PRK08633 2-acyl-glycerophospho 96.4 0.074 1.6E-06 47.8 12.5 53 50-102 113-165 (1146)
125 KOG2533|consensus 96.4 0.015 3.2E-07 49.0 7.6 81 48-129 142-227 (495)
126 PRK15034 nitrate/nitrite trans 96.4 0.12 2.6E-06 43.2 12.8 42 55-96 142-187 (462)
127 TIGR01299 synapt_SV2 synaptic 96.3 0.18 3.8E-06 44.6 14.0 48 53-100 268-315 (742)
128 PLN00028 nitrate transmembrane 96.3 0.15 3.2E-06 42.1 12.8 39 61-99 144-182 (476)
129 TIGR02718 sider_RhtX_FptX side 96.3 0.19 4.2E-06 39.7 13.0 73 53-128 110-182 (390)
130 COG2814 AraJ Arabinose efflux 96.2 0.14 3E-06 42.1 11.9 71 54-127 115-185 (394)
131 PRK10054 putative transporter; 96.2 0.05 1.1E-06 43.6 9.2 69 53-125 311-379 (395)
132 TIGR00792 gph sugar (Glycoside 96.2 0.14 3E-06 40.8 11.8 84 18-101 22-161 (437)
133 TIGR01272 gluP glucose/galacto 96.1 0.087 1.9E-06 41.2 10.2 90 11-102 156-290 (310)
134 PRK09528 lacY galactoside perm 96.1 0.14 3.1E-06 40.9 11.6 66 57-125 332-398 (420)
135 PRK10091 MFS transport protein 96.1 0.41 8.8E-06 37.9 13.8 56 63-122 313-368 (382)
136 KOG3764|consensus 96.1 0.039 8.4E-07 45.8 8.0 70 55-127 174-244 (464)
137 TIGR01272 gluP glucose/galacto 95.9 0.072 1.6E-06 41.7 8.9 54 49-102 19-72 (310)
138 PRK15075 citrate-proton sympor 95.9 0.25 5.4E-06 39.9 12.2 49 55-103 346-395 (434)
139 PRK11010 ampG muropeptide tran 95.9 0.09 2E-06 43.6 9.8 75 49-125 116-190 (491)
140 COG2814 AraJ Arabinose efflux 95.9 0.35 7.6E-06 39.8 13.0 104 22-128 238-384 (394)
141 COG2271 UhpC Sugar phosphate p 95.8 0.03 6.4E-07 46.5 6.4 47 51-97 128-174 (448)
142 TIGR00792 gph sugar (Glycoside 95.8 0.21 4.6E-06 39.8 11.3 50 53-102 324-380 (437)
143 TIGR00898 2A0119 cation transp 95.5 0.42 9E-06 39.1 12.0 70 54-128 424-493 (505)
144 PRK10077 xylE D-xylose transpo 95.4 0.5 1.1E-05 38.2 12.2 69 58-126 382-453 (479)
145 PRK09952 shikimate transporter 95.4 1.1 2.5E-05 36.2 14.1 69 55-124 358-427 (438)
146 PRK10133 L-fucose transporter; 95.3 0.87 1.9E-05 37.2 13.3 80 21-100 51-177 (438)
147 PRK10642 proline/glycine betai 95.2 1.5 3.2E-05 36.2 14.5 46 58-103 360-405 (490)
148 TIGR00882 2A0105 oligosacchari 95.1 0.51 1.1E-05 37.4 11.2 72 51-125 314-390 (396)
149 TIGR00805 oat sodium-independe 94.9 0.11 2.3E-06 44.9 7.2 50 53-102 185-234 (633)
150 PRK11043 putative transporter; 94.8 0.93 2E-05 35.8 11.9 47 54-101 310-356 (401)
151 TIGR00712 glpT glycerol-3-phos 94.7 0.49 1.1E-05 38.2 10.3 59 63-124 368-427 (438)
152 KOG2504|consensus 94.7 0.21 4.5E-06 42.2 8.2 57 63-119 411-472 (509)
153 COG2223 NarK Nitrate/nitrite t 94.6 0.056 1.2E-06 44.7 4.4 122 4-128 227-399 (417)
154 PRK09669 putative symporter Ya 94.6 1.6 3.6E-05 35.3 13.0 83 17-99 31-169 (444)
155 PF03092 BT1: BT1 family; Int 94.6 0.89 1.9E-05 37.4 11.5 63 57-122 103-167 (433)
156 PF03825 Nuc_H_symport: Nucleo 94.4 0.41 8.9E-06 39.1 9.1 47 56-102 317-364 (400)
157 PRK10406 alpha-ketoglutarate t 94.4 2.2 4.8E-05 34.4 13.9 65 58-125 354-419 (432)
158 TIGR00894 2A0114euk Na(+)-depe 94.3 0.41 8.8E-06 38.9 8.8 56 71-126 391-446 (465)
159 TIGR00883 2A0106 metabolite-pr 94.2 0.35 7.5E-06 37.3 7.9 70 55-124 111-185 (394)
160 PRK09584 tppB putative tripept 94.0 0.46 1E-05 39.6 8.7 51 49-99 391-441 (500)
161 PRK09848 glucuronide transport 93.9 0.16 3.5E-06 41.1 5.9 52 51-102 330-388 (448)
162 PRK15462 dipeptide/tripeptide 93.9 0.29 6.2E-06 41.3 7.5 80 50-129 387-478 (493)
163 PRK10207 dipeptide/tripeptide 93.9 0.45 9.8E-06 39.7 8.5 51 49-99 388-438 (489)
164 TIGR01301 GPH_sucrose GPH fami 93.9 0.51 1.1E-05 39.6 8.8 74 53-126 127-214 (477)
165 PRK11102 bicyclomycin/multidru 93.7 2.3 5E-05 33.0 11.9 24 21-44 220-243 (377)
166 PRK15075 citrate-proton sympor 93.6 0.49 1.1E-05 38.2 8.1 44 56-99 133-176 (434)
167 PRK10406 alpha-ketoglutarate t 93.6 0.81 1.8E-05 36.9 9.3 69 55-123 139-212 (432)
168 PLN00028 nitrate transmembrane 93.5 0.88 1.9E-05 37.5 9.5 55 69-128 376-431 (476)
169 KOG2325|consensus 93.5 0.042 9.2E-07 46.3 1.7 64 57-123 405-468 (488)
170 TIGR00887 2A0109 phosphate:H+ 93.4 0.75 1.6E-05 37.9 9.1 47 54-100 129-175 (502)
171 TIGR00788 fbt folate/biopterin 93.1 2.7 5.9E-05 34.7 11.9 70 54-127 134-206 (468)
172 PRK10642 proline/glycine betai 93.0 1.2 2.5E-05 36.8 9.6 70 54-124 132-207 (490)
173 PRK10473 multidrug efflux syst 92.8 3.8 8.3E-05 32.2 12.7 27 19-45 227-253 (392)
174 PRK09952 shikimate transporter 92.6 1.3 2.8E-05 35.9 9.3 66 55-121 140-211 (438)
175 TIGR00926 2A1704 Peptide:H+ sy 91.5 4.5 9.8E-05 35.4 11.7 118 10-127 2-179 (654)
176 TIGR00903 2A0129 major facilit 91.3 0.79 1.7E-05 36.7 6.5 46 55-100 295-340 (368)
177 TIGR00889 2A0110 nucleoside tr 91.1 4.5 9.8E-05 32.7 10.8 31 15-45 22-52 (418)
178 PRK15034 nitrate/nitrite trans 91.0 1.7 3.7E-05 36.4 8.4 55 73-129 399-453 (462)
179 COG2223 NarK Nitrate/nitrite t 90.7 1.2 2.5E-05 37.1 6.9 44 55-99 119-166 (417)
180 PRK15403 multidrug efflux syst 90.5 8 0.00017 31.1 12.8 62 55-121 327-388 (413)
181 KOG2615|consensus 90.2 0.32 6.9E-06 40.4 3.2 43 59-101 139-181 (451)
182 PF03209 PUCC: PUCC protein; 90.1 2.2 4.7E-05 35.3 8.1 49 54-102 103-151 (403)
183 TIGR00887 2A0109 phosphate:H+ 89.3 1.5 3.3E-05 36.2 6.7 67 59-125 411-484 (502)
184 PF06813 Nodulin-like: Nodulin 89.0 6.4 0.00014 30.3 9.6 42 59-102 116-157 (250)
185 TIGR00886 2A0108 nitrite extru 89.0 0.95 2.1E-05 34.9 5.1 33 13-45 243-275 (366)
186 PF05631 DUF791: Protein of un 89.0 11 0.00024 30.7 13.4 60 67-127 153-213 (354)
187 PRK10133 L-fucose transporter; 88.9 11 0.00025 30.6 12.2 83 18-102 281-407 (438)
188 COG0738 FucP Fucose permease [ 88.7 6.8 0.00015 32.6 9.9 73 53-125 117-205 (422)
189 TIGR02332 HpaX 4-hydroxyphenyl 88.6 3.7 8.1E-05 33.0 8.4 37 66-102 359-395 (412)
190 COG0738 FucP Fucose permease [ 88.2 1.9 4.1E-05 35.8 6.4 87 14-102 255-384 (422)
191 PRK10429 melibiose:sodium symp 88.2 13 0.00028 30.5 13.0 43 55-97 121-164 (473)
192 KOG2532|consensus 86.8 1.8 3.9E-05 36.3 5.7 57 70-127 387-444 (466)
193 COG2807 CynX Cyanate permease 86.8 8.5 0.00018 31.8 9.3 83 25-107 237-364 (395)
194 PRK09669 putative symporter Ya 86.3 3.5 7.6E-05 33.3 7.0 53 50-102 329-388 (444)
195 PF03209 PUCC: PUCC protein; 86.3 18 0.00039 30.0 13.1 82 48-129 309-397 (403)
196 PRK10429 melibiose:sodium symp 83.9 6.5 0.00014 32.2 7.6 51 52-102 336-393 (473)
197 PF01306 LacY_symp: LacY proto 81.2 27 0.00059 29.0 10.2 66 59-127 331-397 (412)
198 KOG1330|consensus 80.9 0.63 1.4E-05 39.3 0.6 76 51-128 132-207 (493)
199 PF03092 BT1: BT1 family; Int 80.4 31 0.00067 28.3 14.2 78 51-128 329-411 (433)
200 KOG0569|consensus 78.9 39 0.00085 28.7 10.8 64 53-120 381-444 (485)
201 PF06963 FPN1: Ferroportin1 (F 75.0 38 0.00082 28.2 9.4 34 62-95 378-411 (432)
202 TIGR01301 GPH_sucrose GPH fami 74.3 37 0.00081 28.6 9.3 70 59-129 399-470 (477)
203 PF06609 TRI12: Fungal trichot 74.0 18 0.0004 31.4 7.6 43 62-104 427-469 (599)
204 KOG2816|consensus 73.5 10 0.00022 31.8 5.8 71 46-116 370-440 (463)
205 PF13347 MFS_2: MFS/sugar tran 71.8 18 0.00039 29.0 6.7 51 52-102 327-384 (428)
206 COG3104 PTR2 Dipeptide/tripept 71.0 8.9 0.00019 32.6 4.8 113 11-126 37-202 (498)
207 TIGR00769 AAA ADP/ATP carrier 70.2 64 0.0014 27.2 9.8 80 50-129 138-227 (472)
208 PF13347 MFS_2: MFS/sugar tran 69.8 56 0.0012 26.2 10.0 49 54-102 117-166 (428)
209 COG0477 ProP Permeases of the 69.3 26 0.00057 24.7 6.5 52 51-102 105-158 (338)
210 PF02487 CLN3: CLN3 protein; 68.2 44 0.00095 27.7 8.3 53 47-99 342-394 (402)
211 PF00854 PTR2: POT family; In 66.6 25 0.00054 27.8 6.4 76 49-127 42-120 (372)
212 PRK09848 glucuronide transport 65.4 71 0.0015 25.7 12.7 29 17-45 30-58 (448)
213 KOG2325|consensus 63.1 93 0.002 26.5 9.4 75 53-127 142-226 (488)
214 PRK11462 putative transporter; 61.8 89 0.0019 25.6 13.1 46 55-100 124-170 (460)
215 TIGR00885 fucP L-fucose:H+ sym 58.4 96 0.0021 25.0 9.7 51 50-102 331-381 (410)
216 PF05978 UNC-93: Ion channel r 56.1 70 0.0015 22.7 6.6 57 46-102 95-151 (156)
217 PF01306 LacY_symp: LacY proto 53.1 18 0.00039 30.0 3.5 34 12-45 24-57 (412)
218 PTZ00207 hypothetical protein; 43.8 2.2E+02 0.0048 24.8 9.0 80 48-128 460-550 (591)
219 PF12280 BSMAP: Brain specific 41.4 27 0.00059 26.3 2.6 25 105-129 183-207 (207)
220 PF03825 Nuc_H_symport: Nucleo 38.9 2.1E+02 0.0046 23.2 9.8 78 15-95 22-144 (400)
221 PRK11462 putative transporter; 36.9 2.3E+02 0.0051 23.1 10.5 50 53-102 331-387 (460)
222 KOG0255|consensus 36.7 2.4E+02 0.0052 23.2 7.9 49 52-101 183-231 (521)
223 PF12832 MFS_1_like: MFS_1 lik 35.8 23 0.00051 22.0 1.3 38 7-45 12-49 (77)
224 KOG1278|consensus 35.6 2.3E+02 0.0049 25.0 7.4 54 65-118 352-417 (628)
225 COG0598 CorA Mg2+ and Co2+ tra 33.1 1.5E+02 0.0033 23.3 5.9 55 71-128 255-315 (322)
226 COG2211 MelB Na+/melibiose sym 32.7 2.2E+02 0.0048 24.2 6.9 92 10-101 251-395 (467)
227 COG2059 ChrA Chromate transpor 31.5 2.2E+02 0.0048 21.2 11.2 89 10-104 21-135 (195)
228 COG2271 UhpC Sugar phosphate p 29.5 3.5E+02 0.0077 22.9 7.9 52 64-119 370-424 (448)
229 COG2211 MelB Na+/melibiose sym 28.8 3.6E+02 0.0079 22.9 11.3 65 55-119 127-192 (467)
230 PRK03612 spermidine synthase; 28.5 3.7E+02 0.008 22.8 9.4 51 49-100 119-169 (521)
231 PF11947 DUF3464: Protein of u 26.5 1.3E+02 0.0028 21.6 4.0 41 53-93 107-147 (153)
232 PRK11085 magnesium/nickel/coba 25.8 3.4E+02 0.0074 21.6 6.7 20 90-109 265-285 (316)
233 KOG2504|consensus 24.7 4.3E+02 0.0094 22.4 7.5 50 68-119 162-211 (509)
234 PRK09546 zntB zinc transporter 22.6 1.7E+02 0.0038 22.9 4.5 51 72-128 261-317 (324)
235 COG3242 Uncharacterized protei 21.8 2E+02 0.0044 17.5 4.5 57 72-129 3-60 (62)
No 1
>KOG2816|consensus
Probab=99.59 E-value=1.6e-15 Score=125.30 Aligned_cols=107 Identities=26% Similarity=0.451 Sum_probs=94.9
Q ss_pred ccchhHHHHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------H
Q psy16105 11 YQGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------L 46 (130)
Q Consensus 11 ~~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~ 46 (130)
..+.+++.++|+|.||+||+++++.+.+..+.... .
T Consensus 257 ~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~ 336 (463)
T KOG2816|consen 257 AGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFA 336 (463)
T ss_pred hcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhH
Confidence 44555577999999999999999999888765544 4
Q ss_pred HHHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHH
Q psy16105 47 GAVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLV 117 (130)
Q Consensus 47 ~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~ 117 (130)
+.++.+++....|++|+.+||.+++|||||+++..+.+++++++++|++++.+|..|.+.+||..|...++
T Consensus 337 ~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~~~~~~~~~~~~~ 407 (463)
T KOG2816|consen 337 AGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLDDLPGFLFVISSL 407 (463)
T ss_pred HHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHHhcccccccccch
Confidence 56677788999999999999999999999999999999999999999999999999999999988887766
No 2
>PRK10054 putative transporter; Provisional
Probab=98.42 E-value=1.2e-05 Score=64.56 Aligned_cols=108 Identities=10% Similarity=0.022 Sum_probs=80.5
Q ss_pred hhHHHHHhhhhhccccchhHHHHHHHHHHHHH-----------------------------------------H---HHH
Q psy16105 14 EFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF-----------------------------------------L---GAV 49 (130)
Q Consensus 14 ~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~-----------------------------------------~---~~~ 49 (130)
....+..|.++++||++.+.|+..+...+... . ...
T Consensus 26 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (395)
T PRK10054 26 TLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFAL 105 (395)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34566788899999999999999887654443 0 011
Q ss_pred HHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 50 ASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 50 ~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
.+...+...|+.++..++.+|++++|+.+|......+++..++|++...+++. .+ ..+|++.+.+.+..+++
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~---g~-~~~f~~~~~~~~i~~i~ 177 (395)
T PRK10054 106 INCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQ---SI-NLPFWLAAICSAFPLVF 177 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cc-CcHHHHHHHHHHHHHHH
Confidence 12222455788999999999999999999999999999999999999988753 23 45777777666555433
No 3
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.38 E-value=2.1e-06 Score=71.45 Aligned_cols=80 Identities=18% Similarity=0.223 Sum_probs=63.7
Q ss_pred HHHHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 46 LGAVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 46 ~~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
.+...+.+.|-.++..||+.++++|+++.|+.||+.+..+-.+..++|.++..+-..|-+...| ++....+.+..+++
T Consensus 386 ~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g--~~~l~~lf~~gl~l 463 (477)
T PF11700_consen 386 LAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYG--FLFLLVLFLIGLIL 463 (477)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH--HHHHHHHHHHHHHH
Confidence 4455666778899999999999999999999999999999999999999999998887554445 33444455555555
Q ss_pred HH
Q psy16105 126 FL 127 (130)
Q Consensus 126 ~~ 127 (130)
+.
T Consensus 464 l~ 465 (477)
T PF11700_consen 464 LF 465 (477)
T ss_pred Hh
Confidence 44
No 4
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.35 E-value=1.6e-05 Score=63.83 Aligned_cols=108 Identities=13% Similarity=0.036 Sum_probs=80.7
Q ss_pred hHHHHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHH
Q psy16105 15 FTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVA 50 (130)
Q Consensus 15 ~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~ 50 (130)
......|..+.++|++.+.|+..+...+... .....
T Consensus 30 ~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 109 (400)
T PRK11646 30 FPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILS 109 (400)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 4455567788999999999999987554432 11122
Q ss_pred HHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q psy16105 51 SLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIF 126 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~ 126 (130)
+...+...|+..+.+.+.+|+||+|+..|......+++..++|++...+... ....+|++.+.+.+.+.++.
T Consensus 110 g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~----g~~~~f~~~~~~~~~~~i~~ 181 (400)
T PRK11646 110 GLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQY----DFRLVCATGAVLFVLAAAFN 181 (400)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHH
Confidence 3334567899999999999999999999999999999999999999988733 23456777666665554443
No 5
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.30 E-value=1.3e-05 Score=60.92 Aligned_cols=114 Identities=14% Similarity=0.127 Sum_probs=86.0
Q ss_pred cchhHHHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------------------------H
Q psy16105 12 QGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF---------------------------------------------L 46 (130)
Q Consensus 12 ~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~---------------------------------------------~ 46 (130)
.........|.++.+++++.+.+...+..++... .
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 271 (352)
T cd06174 192 YGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVA 271 (352)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 3344556666777778888888887766544333 1
Q ss_pred HHHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q psy16105 47 GAVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIF 126 (130)
Q Consensus 47 ~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~ 126 (130)
....+...+...|...+.+.+.+|+|++|+.+|..+..++++..++|++...+++. .-+...|.+.+.+.+++.++.
T Consensus 272 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~---~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 272 LLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT---GGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCcchHHHHHHHHHHHHHHHh
Confidence 12233345667899999999999999999999999999999999999999999863 345677888888887777665
Q ss_pred Hh
Q psy16105 127 LC 128 (130)
Q Consensus 127 ~~ 128 (130)
.+
T Consensus 349 ~~ 350 (352)
T cd06174 349 LL 350 (352)
T ss_pred ee
Confidence 44
No 6
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.24 E-value=2.7e-05 Score=59.91 Aligned_cols=70 Identities=13% Similarity=0.037 Sum_probs=56.9
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHh
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFLC 128 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~~ 128 (130)
..|...+++++.+|++++|+.+|..+....++..++|++...+++..-+ ....|++.+++.+++.++..+
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 328 AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGS--FAGALMVVAALALIGALSYLL 397 (399)
T ss_pred hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCc--hhHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999875211 345667777776666665544
No 7
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.22 E-value=2.7e-05 Score=59.63 Aligned_cols=102 Identities=13% Similarity=0.103 Sum_probs=78.7
Q ss_pred hhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHhh
Q psy16105 21 YTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSNA 56 (130)
Q Consensus 21 y~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~ 56 (130)
+.++++|+++.+.|+..+...+... .....+...+.
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 101 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGF 101 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccccccc
Confidence 6788999999999998877655443 11222333478
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
..|+.++.+++..|+|||++.++..+...+++.+++|++...+++. . .|+ .+|++.+.+.++..++
T Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~-~~~-~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 102 FSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY-F-GWR-WAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-C-HHC-CHHHHHHHHHHHHHHH
T ss_pred ccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc-c-ccc-cccccccchhhhhhhh
Confidence 8999999999999999999999999999999999999999988733 1 133 3577777777666554
No 8
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.17 E-value=6.7e-05 Score=57.74 Aligned_cols=104 Identities=13% Similarity=0.084 Sum_probs=76.8
Q ss_pred HHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHH
Q psy16105 18 MYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLF 53 (130)
Q Consensus 18 ~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~ 53 (130)
..-+.++++++++.+.|+..+...+... .-...+..
T Consensus 16 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 95 (399)
T TIGR00893 16 AAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAA 95 (399)
T ss_pred hHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 3345678899999999999887655443 11223334
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALF 124 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~ 124 (130)
.+...|+..+.+++..|+||||+.++..+...+++.+++|++...+.+.. .| ...|++.+.+.++..+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--~~-~~~~~~~~~~~~~~~~ 163 (399)
T TIGR00893 96 EAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF--SW-QWAFIIEGVLGIIWGV 163 (399)
T ss_pred HHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC--Cc-hHHHHHHHHHHHHHHH
Confidence 56778999999999999999999999999999999999999998776541 13 3456666555544433
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=98.12 E-value=8.8e-05 Score=58.86 Aligned_cols=101 Identities=11% Similarity=-0.008 Sum_probs=72.5
Q ss_pred hhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHhh
Q psy16105 21 YTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSNA 56 (130)
Q Consensus 21 y~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~ 56 (130)
..++++|+++.+.|+..+...+... .-...+...+.
T Consensus 34 ~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~ 113 (390)
T PRK03545 34 DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAI 113 (390)
T ss_pred HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3467899999999998776653322 00112223345
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALF 124 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~ 124 (130)
..|...+++++..|+||||+..|..+...+++..++|++...+.+. .-....|++.+.+.+...+
T Consensus 114 ~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~---~gw~~~f~~~~~~~~l~~~ 178 (390)
T PRK03545 114 FWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY---LGWRTTFLAIGGGALITLL 178 (390)
T ss_pred HHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH---hcHHHHHHHHHHHHHHHHH
Confidence 6788899999999999999999999999999999999999877653 1223566666665544433
No 10
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.11 E-value=9.5e-05 Score=59.31 Aligned_cols=97 Identities=13% Similarity=0.021 Sum_probs=72.5
Q ss_pred hhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHhhHH
Q psy16105 23 RLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSNASF 58 (130)
Q Consensus 23 ~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~ 58 (130)
.+.++|++.+.|...+...+... .-...+...+...
T Consensus 47 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 126 (394)
T PRK10213 47 AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFW 126 (394)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHH
Confidence 46899999999988766544332 1123344456678
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHH
Q psy16105 59 IAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPA 122 (130)
Q Consensus 59 p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~ 122 (130)
|...+++++.+|++|+|+..+......+++..++|++...+.+. +-....|++.+.+.+++
T Consensus 127 ~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~---~gw~~~f~~~~~l~~~~ 187 (394)
T PRK10213 127 AMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL---IGWRNVFNAAAVMGVLC 187 (394)
T ss_pred HHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988765 22234566655554443
No 11
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.08 E-value=6e-05 Score=59.81 Aligned_cols=70 Identities=13% Similarity=0.137 Sum_probs=56.5
Q ss_pred HhhHHHHHHHHHhcCCCc-cchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSA-EELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIF 126 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~-~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~ 126 (130)
.+...++..+.+++..++ +++|+.++..++..+++..++|++...+|+.. -....|++++++.++++++.
T Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~---G~~~~f~~~~~~~l~a~~~~ 387 (390)
T TIGR02718 317 TGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF---GYAGGFLSGTVLAVLAILLA 387 (390)
T ss_pred HHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHh
Confidence 456668888888888876 88999999999999999999999999999762 23467777777777765543
No 12
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.08 E-value=7.1e-05 Score=60.13 Aligned_cols=75 Identities=16% Similarity=-0.027 Sum_probs=62.0
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccc-cCCchHHHHHHHHHHHHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLD-FMPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~-~~pg~~f~~~a~l~~~~~~l~~ 127 (130)
..+...|...+++.+.+|+++||+.+|..+....++..++|.+...+++.+-+ ..+..+|...+.+.+...+.+.
T Consensus 310 g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 310 GSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred HHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHH
Confidence 34567788899999999999999999999999999999999999999988644 3577888877777666655543
No 13
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.02 E-value=0.00026 Score=54.40 Aligned_cols=70 Identities=13% Similarity=0.046 Sum_probs=54.5
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
..+...|+..+++++..|++|+|+.+|..+....++.+++|++...+++.. .| ...|++.+...+++.++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~--g~-~~~~~~~~~~~~~~~~~ 174 (365)
T TIGR00900 105 AQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL--GI-KWAIWVDAVGFAISALL 174 (365)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh--hH-HHHHHHHHHHHHHHHHH
Confidence 346778999999999999999999999999999999999999998887642 12 34556555555444433
No 14
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.01 E-value=5.1e-05 Score=62.73 Aligned_cols=115 Identities=13% Similarity=0.139 Sum_probs=84.8
Q ss_pred ccchhHHHHHhhhhh--ccccchhHHHHHHHHHHHHH-------------------------------------------
Q psy16105 11 YQGEFTVMYLYTRLA--FRWNEYNYSTFYTAYYFTDF------------------------------------------- 45 (130)
Q Consensus 11 ~~g~~~i~~ly~~~~--f~W~~~~~g~~~~~~~~~~~------------------------------------------- 45 (130)
+.+....+.+|.+++ +||++.+.|...+.......
T Consensus 26 ~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~ 105 (475)
T TIGR00924 26 YYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLI 105 (475)
T ss_pred HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHH
Confidence 446678888999888 99999999999877654333
Q ss_pred -HH-HHHHHHHhhHHHHHHHHHhcCCCccc---hHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHH
Q psy16105 46 -LG-AVASLFSNASFIAMRAIISKLTSAEE---LGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTS 120 (130)
Q Consensus 46 -~~-~~~~~~~~~~~p~~rs~iSk~v~~~e---qG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~ 120 (130)
.+ ...+...+...|+..+++++..|++| +++.++......+++..++|++...+.+. .-....|.+.+...+
T Consensus 106 ~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~---~g~~~~f~~~~~~~~ 182 (475)
T TIGR00924 106 FYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAEN---YGYHVGFNLAAVGMV 182 (475)
T ss_pred HHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHh---cChHHHHHHHHHHHH
Confidence 00 12223345677888999999998876 88899999999999999999999988764 223466777666555
Q ss_pred HHHHHHHh
Q psy16105 121 PALFIFLC 128 (130)
Q Consensus 121 ~~~~l~~~ 128 (130)
.+++++.+
T Consensus 183 ~~~l~~~~ 190 (475)
T TIGR00924 183 IGLLTFFA 190 (475)
T ss_pred HHHHHHHH
Confidence 55555443
No 15
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.01 E-value=0.00024 Score=56.86 Aligned_cols=90 Identities=11% Similarity=0.072 Sum_probs=68.0
Q ss_pred chhHHHHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHH
Q psy16105 13 GEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGA 48 (130)
Q Consensus 13 g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~ 48 (130)
+.......|.+++++.++.+.|+..+..++..+ ...
T Consensus 241 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T PRK10489 241 AVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLA 320 (417)
T ss_pred hHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 334455667888899999999988776544332 111
Q ss_pred HHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 49 VASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 49 ~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
..+...+...|...+++.+.+|+|++|+.+|.......++..++|.+...+.+.
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~ 374 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM 374 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH
Confidence 122233455677788999999999999999999999999999999999999875
No 16
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.00 E-value=4.4e-05 Score=59.44 Aligned_cols=112 Identities=16% Similarity=0.105 Sum_probs=78.1
Q ss_pred ccchhHHHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------------------------
Q psy16105 11 YQGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------- 45 (130)
Q Consensus 11 ~~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------- 45 (130)
.......+..|.++++++++.+.|...+...+...
T Consensus 13 ~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 92 (375)
T TIGR00899 13 GALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLV 92 (375)
T ss_pred HHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 33445667778889999999999999877654333
Q ss_pred HHHHHHHHHhhHHHHHHHHHhcCCCccchHHH--HHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Q psy16105 46 LGAVASLFSNASFIAMRAIISKLTSAEELGKV--MSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPAL 123 (130)
Q Consensus 46 ~~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~--~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~ 123 (130)
.....+.+.+...|...++..+..|+++|++. .+......+++..++|++...+.+. .-...+|++.+.+.+...
T Consensus 93 ~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~---~~~~~~f~~~~~~~~~~~ 169 (375)
T TIGR00899 93 LGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG---FGFTVMFLTAALAFVLCG 169 (375)
T ss_pred HHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh---cccHHHHHHHHHHHHHHH
Confidence 11122233456778888998888887777754 6888888899999999999888754 223356777766655444
Q ss_pred HH
Q psy16105 124 FI 125 (130)
Q Consensus 124 ~l 125 (130)
++
T Consensus 170 ~~ 171 (375)
T TIGR00899 170 VL 171 (375)
T ss_pred HH
Confidence 33
No 17
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.00 E-value=0.0002 Score=55.83 Aligned_cols=102 Identities=14% Similarity=0.079 Sum_probs=73.2
Q ss_pred hhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHhhH
Q psy16105 22 TRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSNAS 57 (130)
Q Consensus 22 ~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~ 57 (130)
.++.+++++++.|+..+...+... .-...+...+..
T Consensus 31 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 110 (385)
T TIGR00710 31 IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAG 110 (385)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHH
Confidence 466799999999988877654333 111223334667
Q ss_pred HHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q psy16105 58 FIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIF 126 (130)
Q Consensus 58 ~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~ 126 (130)
.|...+++++..|+||+|+.++..+....++..++|++...+.+. .-....|++.+.+.+...++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~ 176 (385)
T TIGR00710 111 SVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW---LSWHAIFAFLSLAGILLSALI 176 (385)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999877654 112345555555554444443
No 18
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.97 E-value=0.00023 Score=57.43 Aligned_cols=103 Identities=9% Similarity=-0.009 Sum_probs=74.3
Q ss_pred HHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHH
Q psy16105 18 MYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLF 53 (130)
Q Consensus 18 ~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~ 53 (130)
.....++.++|++.+.|...+...+... .-...+..
T Consensus 30 ~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 109 (412)
T TIGR02332 30 AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIA 109 (412)
T ss_pred HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 3445688999999999999886643332 11223444
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhc----cccCCchHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTAT----LDFMPSTFLLMSLVLTSP 121 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t----~~~~pg~~f~~~a~l~~~ 121 (130)
.+...|+..+.+++..|++|||+..+..+...+++..+++++...+.+.. ...|. ..|++.+...+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr-~~f~~~~~~~l~ 180 (412)
T TIGR02332 110 EAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQ-WLFLLEGFPSVI 180 (412)
T ss_pred HhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchh-HHHHHHHHHHHH
Confidence 56677888899999999999999999999999999999999998886531 11244 455555555433
No 19
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.96 E-value=0.00026 Score=56.74 Aligned_cols=69 Identities=16% Similarity=0.020 Sum_probs=55.3
Q ss_pred HHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Q psy16105 51 SLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPAL 123 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~ 123 (130)
+...+...|+.++++++.+|+||++|..|..+....++.+++|++...+++.. +..++.+.+.+.+.+.
T Consensus 99 G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~----~~~~~~i~~~~~~~~~ 167 (393)
T PRK11195 99 GIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH----AEAALAVCALIYLLAA 167 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 44467889999999999999999999999999999999999999999998763 3344555554444443
No 20
>PRK11663 regulatory protein UhpC; Provisional
Probab=97.94 E-value=0.00027 Score=57.25 Aligned_cols=97 Identities=9% Similarity=0.058 Sum_probs=70.8
Q ss_pred hhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHhh
Q psy16105 21 YTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSNA 56 (130)
Q Consensus 21 y~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~ 56 (130)
..++.+++++.+.|+..+...+... .-...+...+.
T Consensus 48 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~ 127 (434)
T PRK11663 48 EMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGW 127 (434)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHc
Confidence 3455799999999999877654443 00112333455
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHH
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTS 120 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~ 120 (130)
..|...+++++..|++|||+..|..+....++..++|++...+++.. .| ...|++.+.+.+
T Consensus 128 ~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~--gw-~~~f~~~~i~~~ 188 (434)
T PRK11663 128 GWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY--GW-RYGMMIAGIIAI 188 (434)
T ss_pred cchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--cH-HHHHHHHHHHHH
Confidence 66888999999999999999999999999999999999999887541 23 345566555543
No 21
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.93 E-value=0.00015 Score=55.69 Aligned_cols=87 Identities=11% Similarity=0.051 Sum_probs=68.1
Q ss_pred HHHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------------------------HHHHH
Q psy16105 16 TVMYLYTRLAFRWNEYNYSTFYTAYYFTDF---------------------------------------------LGAVA 50 (130)
Q Consensus 16 ~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~---------------------------------------------~~~~~ 50 (130)
.....|.++.+++++.+.|...+..++..+ .....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 455666777899999999988876654433 00111
Q ss_pred HHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 51 SLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
+...+...|..++.+.+.+|+|++|+.+|.......++..++|++...+++.
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2224566789999999999999999999999999999999999999988765
No 22
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=97.93 E-value=0.00039 Score=54.42 Aligned_cols=98 Identities=16% Similarity=0.144 Sum_probs=71.0
Q ss_pred hhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHhhHH
Q psy16105 23 RLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSNASF 58 (130)
Q Consensus 23 ~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~ 58 (130)
.+.+|+++.+.|+..+...+... .....+...+...
T Consensus 18 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 97 (377)
T PRK11102 18 AADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAAS 97 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHH
Confidence 34689999999988877654333 1122233456678
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Q psy16105 59 IAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPAL 123 (130)
Q Consensus 59 p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~ 123 (130)
|...+.+++..|+||||+..+.......++..++|++...+.+.. .| ...|++.+.+.++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--~~-~~~~~~~~~~~~~~~ 159 (377)
T PRK11102 98 VVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF--SW-HAIFWVLALAAILAA 159 (377)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--Ch-HHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999988887642 12 235555555554443
No 23
>KOG2615|consensus
Probab=97.92 E-value=2e-05 Score=64.39 Aligned_cols=94 Identities=13% Similarity=0.221 Sum_probs=77.3
Q ss_pred ccchhHHHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------------------------
Q psy16105 11 YQGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------- 45 (130)
Q Consensus 11 ~~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------- 45 (130)
+++.+.....|+..||+.++.|-|..++..++...
T Consensus 277 ~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~ 356 (451)
T KOG2615|consen 277 FSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLY 356 (451)
T ss_pred HHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhh
Confidence 45556666666678999999999999988877665
Q ss_pred HHH-HHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhcc
Q psy16105 46 LGA-VASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATL 104 (130)
Q Consensus 46 ~~~-~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~ 104 (130)
++. .-...+....|++.++..|.+|++|+|.+.|+..++.++++.++|.+...++.+..
T Consensus 357 ~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~ 416 (451)
T KOG2615|consen 357 LGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQ 416 (451)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEec
Confidence 222 22333567899999999999999999999999999999999999999988887754
No 24
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.89 E-value=0.00028 Score=53.54 Aligned_cols=105 Identities=11% Similarity=0.060 Sum_probs=74.5
Q ss_pred HHHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHH
Q psy16105 17 VMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASL 52 (130)
Q Consensus 17 i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~ 52 (130)
....|. ++++.++++.+...+...+... .....+.
T Consensus 21 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 99 (352)
T cd06174 21 ALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGL 99 (352)
T ss_pred hHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHc
Confidence 333444 4569999999998877765544 1111222
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
..+...|...+.+++..|+|||++.++......+++..++|.+...+.+..- + ...|++.+.+.++..++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~ 169 (352)
T cd06174 100 GGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG--W-RWLFLILAILGLLLALL 169 (352)
T ss_pred ccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh--H-HHHHHHHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999999998876521 2 23455555555444443
No 25
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.84 E-value=0.00048 Score=54.62 Aligned_cols=72 Identities=10% Similarity=-0.013 Sum_probs=54.0
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHh
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFLC 128 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~~ 128 (130)
+...|...++.++.+|++++|+..|.......++..++|++...+++.+ ......++..+.+.+.+.++..+
T Consensus 323 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 323 VGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG--RSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC--CchHHHHHHHHHHHHHHHHHHHH
Confidence 3457888899999999999999999999999999999999999998652 12233444555455555544443
No 26
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.83 E-value=0.00034 Score=55.38 Aligned_cols=87 Identities=14% Similarity=0.030 Sum_probs=67.1
Q ss_pred HHHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------HH---------------------
Q psy16105 16 TVMYLYTRLAFRWNEYNYSTFYTAYYFTDF---------------------------LG--------------------- 47 (130)
Q Consensus 16 ~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~---------------------------~~--------------------- 47 (130)
..+..|.++++++++.+.|...+...+... ++
T Consensus 36 ~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (399)
T PRK05122 36 AVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLL 115 (399)
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHH
Confidence 455567788999999999999887765443 00
Q ss_pred ----HHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 48 ----AVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 48 ----~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
...+...+...|+..+.+.+.+|+||+|+..+..+...+++.+++|++...+.+.
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 116 LLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 0112223456778888889999999999999999999999999999999888764
No 27
>PRK12382 putative transporter; Provisional
Probab=97.82 E-value=0.00068 Score=53.67 Aligned_cols=87 Identities=13% Similarity=0.029 Sum_probs=66.2
Q ss_pred HHHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------HHH--------------------
Q psy16105 16 TVMYLYTRLAFRWNEYNYSTFYTAYYFTDF---------------------------LGA-------------------- 48 (130)
Q Consensus 16 ~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~---------------------------~~~-------------------- 48 (130)
.+...|.++++|+|+.+.|...+...+... .+.
T Consensus 36 p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (392)
T PRK12382 36 PVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALL 115 (392)
T ss_pred hhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHH
Confidence 445567888999999999999988755443 000
Q ss_pred -----HHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 49 -----VASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 49 -----~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
..+...+...|+..+.+.+.+|+||+|+..|..+...+.+..++|++...+++.
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~ 174 (392)
T PRK12382 116 VVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH 174 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 011122445677788889999999999999999999999999999998887654
No 28
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=97.81 E-value=0.00012 Score=56.03 Aligned_cols=81 Identities=12% Similarity=0.148 Sum_probs=65.1
Q ss_pred chhHHHHHhhhhhcccc-chhHHHHHHHHHHHHH----------------------------------------------
Q psy16105 13 GEFTVMYLYTRLAFRWN-EYNYSTFYTAYYFTDF---------------------------------------------- 45 (130)
Q Consensus 13 g~~~i~~ly~~~~f~W~-~~~~g~~~~~~~~~~~---------------------------------------------- 45 (130)
........|.+++++|+ +.+.+...+..++...
T Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (352)
T PF07690_consen 224 GFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLI 303 (352)
T ss_dssp HHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHH
T ss_pred HhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 34555666778899999 8899987777655543
Q ss_pred -HHHHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHH
Q psy16105 46 -LGAVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYN 93 (130)
Q Consensus 46 -~~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~ 93 (130)
.....+...+...|..++.+.+.+|+|++|+..|..+..++++..++|
T Consensus 304 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 304 IALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 223345556778999999999999999999999999999999999987
No 29
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.80 E-value=0.00055 Score=54.32 Aligned_cols=100 Identities=11% Similarity=0.021 Sum_probs=71.3
Q ss_pred hhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHhh
Q psy16105 21 YTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSNA 56 (130)
Q Consensus 21 y~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~ 56 (130)
..++++|+++.+.|+..+...+... .-...+...+.
T Consensus 28 ~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~ 107 (382)
T PRK10091 28 ELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGA 107 (382)
T ss_pred HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHH
Confidence 3467899999999998877655444 00112222344
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPAL 123 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~ 123 (130)
..|...+.+++..|++|+++..+......+++..++|++...+.+.. .| ...|++.+.+.+...
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~--gw-r~~f~~~~~~~~~~~ 171 (382)
T PRK10091 108 FFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF--SW-RYTFLLIAVFNIAVL 171 (382)
T ss_pred HHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc--cH-HHHHHHHHHHHHHHH
Confidence 56777888999999999999999999999999999999988776531 13 346666666554443
No 30
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.79 E-value=0.00071 Score=53.63 Aligned_cols=98 Identities=8% Similarity=-0.076 Sum_probs=69.7
Q ss_pred hhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHhh
Q psy16105 21 YTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSNA 56 (130)
Q Consensus 21 y~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~ 56 (130)
..++.+++++++.|+..+...+... .-...+...+.
T Consensus 40 ~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 119 (406)
T PRK11551 40 RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGG 119 (406)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHH
Confidence 4467799999999999877654433 11222333466
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHH
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSP 121 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~ 121 (130)
..|...+.+++.+|++|+|+..+.......++..+++++...+.+. .-....|++.+.+...
T Consensus 120 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 181 (406)
T PRK11551 120 ALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD---AAWRHIFYVGGVGPLL 181 (406)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc---cCHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999999999998887655332 1122456665554433
No 31
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.79 E-value=0.0012 Score=52.83 Aligned_cols=74 Identities=14% Similarity=0.038 Sum_probs=57.9
Q ss_pred HHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 50 ASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 50 ~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
.+.+.....|+..+++++.+|+||||+..+......+++.++++++...+.+.- .-...+|++.+.+.+.+.+.
T Consensus 104 ~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~--~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 104 VAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV--LGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc--cCHHHHHHHHHHHHHHHHHH
Confidence 345567788999999999999999999999999999999999999998887631 12345677766665554443
No 32
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.78 E-value=0.0013 Score=51.27 Aligned_cols=77 Identities=18% Similarity=0.244 Sum_probs=58.4
Q ss_pred HHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhcc-cc----CCchHHHHHHHHHHHHHHH
Q psy16105 51 SLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATL-DF----MPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~-~~----~pg~~f~~~a~l~~~~~~l 125 (130)
+.......|+..+++++.+|+||||+..|..+...+++.++++++...+++..- +. --..+|++.+.+.+++.++
T Consensus 94 ~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~ 173 (356)
T TIGR00901 94 AFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLV 173 (356)
T ss_pred HHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHH
Confidence 344566789999999999999999999999999999999999999987765521 11 0235677777766665554
Q ss_pred HH
Q psy16105 126 FL 127 (130)
Q Consensus 126 ~~ 127 (130)
..
T Consensus 174 ~~ 175 (356)
T TIGR00901 174 TL 175 (356)
T ss_pred HH
Confidence 43
No 33
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.78 E-value=8.5e-05 Score=57.25 Aligned_cols=103 Identities=10% Similarity=0.078 Sum_probs=72.2
Q ss_pred HHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHH
Q psy16105 18 MYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLF 53 (130)
Q Consensus 18 ~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~ 53 (130)
..-+.++++++++.+.|+..+...+... .-...+..
T Consensus 17 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 96 (379)
T TIGR00881 17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIF 96 (379)
T ss_pred hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 3446678899999999999887665443 11122233
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPA 122 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~ 122 (130)
.+...|...+++++..|++|+|+..+..+....++..++|++.........+ |. ..|++.+.+.++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~ 163 (379)
T TIGR00881 97 QGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS-WH-WVFIVPGIIAIIV 163 (379)
T ss_pred ccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC-ch-hHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999999654444333211 22 3466666555443
No 34
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.76 E-value=0.00028 Score=55.12 Aligned_cols=88 Identities=3% Similarity=-0.000 Sum_probs=66.2
Q ss_pred hHHHHHhhhhhccccchhHHHHHHHHHHHHH------------------------HH---------------------HH
Q psy16105 15 FTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF------------------------LG---------------------AV 49 (130)
Q Consensus 15 ~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~------------------------~~---------------------~~ 49 (130)
......|.++++++++.+.+...+..++..+ .. ..
T Consensus 258 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (405)
T TIGR00891 258 QDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFF 337 (405)
T ss_pred hhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 3445667788899999999988766554433 00 01
Q ss_pred HHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 50 ASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 50 ~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
.+.+.....+...+.+++.+|++++|+.+|....+..++..++|++...+++.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 338 QQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred HHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11122334567788999999999999999999999999999999999999876
No 35
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.75 E-value=0.0012 Score=51.63 Aligned_cols=102 Identities=11% Similarity=0.050 Sum_probs=71.2
Q ss_pred HhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHh
Q psy16105 20 LYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSN 55 (130)
Q Consensus 20 ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~ 55 (130)
-..++.+++++.+.|+..+...+... .-.+.+...+
T Consensus 36 ~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 115 (405)
T TIGR00891 36 AEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMG 115 (405)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhh
Confidence 34577899999999998877654433 0112223345
Q ss_pred hHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHH
Q psy16105 56 ASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPA 122 (130)
Q Consensus 56 ~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~ 122 (130)
...|...+.+++..|++|||+..+..+....++..+++++...+.+..-..|. ..|++.+...+..
T Consensus 116 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~-~~f~~~~~~~~~~ 181 (405)
T TIGR00891 116 GEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWR-ALFFISILPIIFA 181 (405)
T ss_pred hhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHH-HHHHHHHHHHHHH
Confidence 67788899999999999999999999999999999999988877554211122 3455544443333
No 36
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.75 E-value=0.0014 Score=52.29 Aligned_cols=109 Identities=13% Similarity=0.046 Sum_probs=73.1
Q ss_pred hhHHHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------------------------HHH
Q psy16105 14 EFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF---------------------------------------------LGA 48 (130)
Q Consensus 14 ~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~---------------------------------------------~~~ 48 (130)
.......|.+++++||+.++|...+...+... ...
T Consensus 34 ~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (393)
T PRK15011 34 QTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGV 113 (393)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 35567778899999999999998654432221 111
Q ss_pred HHHHHHhhHHHHHHHHHhcCCCccch--HHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 49 VASLFSNASFIAMRAIISKLTSAEEL--GKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 49 ~~~~~~~~~~p~~rs~iSk~v~~~eq--G~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
..+.++....|...++..+..+++++ ++..+..+...+++.+++|++...+.+.. .| ...|++.+.+.++..++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~--gw-~~~f~~~~~~~~~~~~~ 189 (393)
T PRK15011 114 FLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF--SF-TVMYLSAAVAFIVCGVM 189 (393)
T ss_pred HHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc--Ch-HHHHHHHHHHHHHHHHH
Confidence 22333456677778888777766544 45567888889999999999999887641 23 36777777665544433
No 37
>TIGR00895 2A0115 benzoate transport.
Probab=97.74 E-value=0.00031 Score=54.59 Aligned_cols=83 Identities=10% Similarity=0.026 Sum_probs=64.2
Q ss_pred HhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHh
Q psy16105 20 LYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSN 55 (130)
Q Consensus 20 ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~ 55 (130)
.+..+.+++++.+.|+..+...+..+ ...+.+...+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 120 (398)
T TIGR00895 41 PAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLG 120 (398)
T ss_pred HHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccc
Confidence 34467799999999998877644332 1112222345
Q ss_pred hHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 56 ASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 56 ~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
...|...+.+++..|+++||+..|.......++..++|.+...+.+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 167 (398)
T TIGR00895 121 GLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV 167 (398)
T ss_pred cchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc
Confidence 67899999999999999999999999999999999999998877654
No 38
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.73 E-value=0.00052 Score=55.49 Aligned_cols=83 Identities=10% Similarity=0.053 Sum_probs=64.6
Q ss_pred HHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHH
Q psy16105 19 YLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFS 54 (130)
Q Consensus 19 ~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~ 54 (130)
.-...+.+++++++.|+..+...+... .-...+...
T Consensus 25 ~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~ 104 (485)
T TIGR00711 25 IPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGG 104 (485)
T ss_pred HHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhh
Confidence 334466799999999988777654443 011223345
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYT 101 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~ 101 (130)
+...|...+++++.+|++|||+.++..+....++..++|.+...+.+
T Consensus 105 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 151 (485)
T TIGR00711 105 GPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE 151 (485)
T ss_pred hhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc
Confidence 67789999999999999999999999999999999999999887765
No 39
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.72 E-value=0.00059 Score=57.61 Aligned_cols=79 Identities=19% Similarity=0.115 Sum_probs=67.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 46 LGAVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 46 ~~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
...+.++.+.+..|+.++++.++||+||..+..+.++...++++++||.+...++.. .-+...|.+.+..+++.+..
T Consensus 109 ~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~---~G~~~~f~inalsfl~~i~~ 185 (524)
T PF05977_consen 109 LTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAF---FGAAAAFLINALSFLISILA 185 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 445677778999999999999999999999999999999999999999999999876 45677888888877666555
Q ss_pred HH
Q psy16105 126 FL 127 (130)
Q Consensus 126 ~~ 127 (130)
+.
T Consensus 186 l~ 187 (524)
T PF05977_consen 186 LL 187 (524)
T ss_pred HH
Confidence 44
No 40
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.71 E-value=0.00048 Score=52.98 Aligned_cols=64 Identities=9% Similarity=0.060 Sum_probs=51.4
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPAL 123 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~ 123 (130)
..+...+++++.+|++|+|+.+|.......++..++|++...+++.. -....|.+.+++.++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~---g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 312 TISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI---GFEYTFIVTGAFALTSL 375 (377)
T ss_pred chhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh---chhhHHHHHHHHHHHhc
Confidence 34566778899999999999999999999999999999999888652 23456777776666554
No 41
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.69 E-value=0.0022 Score=50.81 Aligned_cols=72 Identities=11% Similarity=0.094 Sum_probs=56.4
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHh
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFLC 128 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~~ 128 (130)
.....|...+.+++.+|+||++...+......+++..++|++...+.+.. -....|.+.+.+.+...+...|
T Consensus 299 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~---g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 299 GFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY---SDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CccHHHHHHHHHHHHHHHHHHh
Confidence 34567999999999999999999988888889999999999999998762 2345666766666666555544
No 42
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.67 E-value=0.0013 Score=52.53 Aligned_cols=70 Identities=16% Similarity=0.015 Sum_probs=54.3
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIF 126 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~ 126 (130)
.+...|+..+.+.+.+|++|+++..+......+++..++|++...+++. ..+...|++.+...+.+.++.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~---~~~~~~~~~~~~~~~~~~~~~ 193 (417)
T PRK10489 124 GSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA---GGVAWNYGLAAAGTFITLLPL 193 (417)
T ss_pred HHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHH
Confidence 3456788899999999999999999999999999999999999988764 223455666666655554443
No 43
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.66 E-value=0.00055 Score=55.63 Aligned_cols=64 Identities=14% Similarity=0.088 Sum_probs=50.4
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLT 119 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~ 119 (130)
.+...|+..+.+++..|++|+|+..|.......++..++|++...+.+... .|+. +|++.+.+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~-gw~~-~f~i~~~~~ 208 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWG-GWPM-IFYVFGIVG 208 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCCe-ehhhhhHHH
Confidence 456688899999999999999999999999999999999999988875421 2433 455544444
No 44
>PRK03545 putative arabinose transporter; Provisional
Probab=97.64 E-value=0.0026 Score=50.44 Aligned_cols=105 Identities=14% Similarity=0.001 Sum_probs=74.2
Q ss_pred HHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHH
Q psy16105 18 MYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLF 53 (130)
Q Consensus 18 ~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~ 53 (130)
...|.++++++++++.|...+..++..+ .....+..
T Consensus 228 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~ 307 (390)
T PRK03545 228 IEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIA 307 (390)
T ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 3455677899999999988766554433 00111111
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIF 126 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~ 126 (130)
.....|...+.+.+..| |++|+..|..+....++..++|++...+++. +-....|.+.+.+.+.++++.
T Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~---~g~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 308 IMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH---LGLSSIGYVGAALALAALVWS 376 (390)
T ss_pred HhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cChhHHHHHHHHHHHHHHHHH
Confidence 23345777888887765 6899999999999999999999999999966 334467777777777666654
No 45
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.63 E-value=0.0016 Score=51.67 Aligned_cols=109 Identities=11% Similarity=0.104 Sum_probs=74.0
Q ss_pred chhHHHHHhhhhhccccchhHHHHHHHHHHHHH-------------------------------------------HH-H
Q psy16105 13 GEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF-------------------------------------------LG-A 48 (130)
Q Consensus 13 g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~-------------------------------------------~~-~ 48 (130)
+.......|.++ .+++++++|+..+...+..+ .. .
T Consensus 223 ~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (382)
T PRK11128 223 AYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQI 301 (382)
T ss_pred hHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 344555567654 89999999998876654333 10 1
Q ss_pred HHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHH-HHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHH
Q psy16105 49 VASLFSNASFIAMRAIISKLTSAEELGKVMSAFM-LFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 49 ~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~-~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~ 127 (130)
..+...+...|.......+. +++|+|+.++... ....++..++|.+...+++.. ...+|+..+++.++++++..
T Consensus 302 l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~----g~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK11128 302 LHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL----GAGVFWVMALVALPALFIRP 376 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHH
Confidence 11222355678888888886 7888899999887 445667788999999998763 23567777777777666543
No 46
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.61 E-value=0.0016 Score=51.68 Aligned_cols=111 Identities=11% Similarity=0.159 Sum_probs=78.1
Q ss_pred ccccchhHHHHHhhhhhccccchhHHHHHHHHHHHHH----------------------------------------HHH
Q psy16105 9 GPYQGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF----------------------------------------LGA 48 (130)
Q Consensus 9 ~~~~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~----------------------------------------~~~ 48 (130)
.+.....+....|.++ +|+++.++|+..+...+..+ ...
T Consensus 219 ~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 297 (382)
T TIGR00902 219 GAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIF 297 (382)
T ss_pred HHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHH
Confidence 3444555666777765 89999999998876543333 001
Q ss_pred HHHHH----HhhHHHHHHHHHhcCCCccchHHHHHHHH-HHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Q psy16105 49 VASLF----SNASFIAMRAIISKLTSAEELGKVMSAFM-LFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPAL 123 (130)
Q Consensus 49 ~~~~~----~~~~~p~~rs~iSk~v~~~eqG~~~~~~~-~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~ 123 (130)
....+ -++..|+.-..+++. |+++|++.|+..+ ....++..++|.+...+|+.. -+ ..|+..+++.+.++
T Consensus 298 ~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~---g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 298 LLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL---GA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cH-HHHHHHHHHHHHHH
Confidence 11112 256778888889988 9999999999976 456799999999999999873 22 45777777776665
Q ss_pred HH
Q psy16105 124 FI 125 (130)
Q Consensus 124 ~l 125 (130)
++
T Consensus 373 ~~ 374 (382)
T TIGR00902 373 FL 374 (382)
T ss_pred HH
Confidence 44
No 47
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.61 E-value=0.00057 Score=55.93 Aligned_cols=68 Identities=15% Similarity=0.117 Sum_probs=52.8
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPAL 123 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~ 123 (130)
.+...|...+++++.+|++++|+.+|..+....++..++|++...+++..-+ ....|.+.+++.+.+.
T Consensus 347 ~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~--~~~~f~~~~~~~li~~ 414 (455)
T TIGR00892 347 FGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKN--YKYIFYASGSIVVSAG 414 (455)
T ss_pred hchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCC--cchHHHHhhHHHHHHH
Confidence 3566788899999999999999999999999999999999999988765211 2245555555554443
No 48
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.60 E-value=0.0023 Score=54.11 Aligned_cols=112 Identities=13% Similarity=0.070 Sum_probs=81.3
Q ss_pred chhHHHHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHH
Q psy16105 13 GEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGA 48 (130)
Q Consensus 13 g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~ 48 (130)
....++.++.|+.++=++..+|+..+..++-.+ ...
T Consensus 236 a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~ 315 (524)
T PF05977_consen 236 AVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALF 315 (524)
T ss_pred HHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 345667788999999999999999988765544 112
Q ss_pred HHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHH
Q psy16105 49 VASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 49 ~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~ 127 (130)
+.+..........++.+-+.+|++.+|+++|+.+.+...+.-+++.+...+-+. .-....+.++++..+++.++..
T Consensus 316 l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~---~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 316 LAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH---FGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHHHH
Confidence 223334566777888889999999999999999998888888888877776554 2334556666666555554443
No 49
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.59 E-value=0.0016 Score=52.88 Aligned_cols=70 Identities=9% Similarity=0.019 Sum_probs=52.5
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHH-HHHHHhHhhHHHHHHHHHHhccc---cCCchHHHHHHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFM-LFEAIAPMIYNPIYNAVYTATLD---FMPSTFLLMSLVLTSPALF 124 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~-~~~sl~~~i~~~l~~~iy~~t~~---~~pg~~f~~~a~l~~~~~~ 124 (130)
+...|+....+++..|+++||+.+|..+ ...+++..++|++...+++.+-+ +-....|.+.+++.+.+.+
T Consensus 323 ~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~ 396 (418)
T TIGR00889 323 DFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAV 396 (418)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Confidence 3567888889999999999999999997 67899999999999999987422 1122455555555444433
No 50
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.59 E-value=0.0036 Score=50.08 Aligned_cols=65 Identities=12% Similarity=0.092 Sum_probs=51.2
Q ss_pred HHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHhc
Q psy16105 61 MRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFLCH 129 (130)
Q Consensus 61 ~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~~~ 129 (130)
..+.+++ .+|+++|+.+|..+..+.++..++|++...+++.. -...+|++.+++.+++.++..|+
T Consensus 336 ~~~~~~~-~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~---g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 336 LAAVFPT-LAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF---GAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHh-hCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---chHHHHHHHHHHHHHHHHHHHHh
Confidence 3455655 46779999999999999999999999999998862 23467777777787777776664
No 51
>PRK03699 putative transporter; Provisional
Probab=97.59 E-value=0.0021 Score=51.17 Aligned_cols=102 Identities=12% Similarity=0.039 Sum_probs=69.8
Q ss_pred hhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHhhH
Q psy16105 22 TRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSNAS 57 (130)
Q Consensus 22 ~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~ 57 (130)
.++.++||+++.|...+...+... .-...+...+..
T Consensus 33 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~ 112 (394)
T PRK03699 33 IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGIT 112 (394)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhh
Confidence 466899999999998876543322 001122234556
Q ss_pred HHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 58 FIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 58 ~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
.|...+.+++..|++|||+..+......+++..++|++...+.....+ |+ .+|.+.+.+.+...++
T Consensus 113 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~g-w~-~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 113 MSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIE-WY-WVYACIGLVYVAIFIL 178 (394)
T ss_pred ccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-HH-HHHHHHHHHHHHHHHH
Confidence 677888999999999999999999888899999999988877654322 33 4555555555444433
No 52
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.57 E-value=0.00058 Score=56.37 Aligned_cols=94 Identities=10% Similarity=0.060 Sum_probs=75.4
Q ss_pred HHHHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHH
Q psy16105 16 TVMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVAS 51 (130)
Q Consensus 16 ~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~ 51 (130)
.....|.+..+||+..|...+....++..+ .+..++
T Consensus 273 ~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g 352 (438)
T COG2270 273 AMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVG 352 (438)
T ss_pred HHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHH
Confidence 334567777888888887777655544443 556677
Q ss_pred HHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCc
Q psy16105 52 LFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPS 109 (130)
Q Consensus 52 ~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg 109 (130)
.+.|-.+...||...|+||++|-|+.||..+..+-.+.+.+|.+.+.+=+.|-+.--|
T Consensus 353 ~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g 410 (438)
T COG2270 353 TSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAG 410 (438)
T ss_pred HhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhH
Confidence 7788999999999999999999999999999999999999999999887666554434
No 53
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.57 E-value=0.00084 Score=54.67 Aligned_cols=88 Identities=7% Similarity=0.005 Sum_probs=64.9
Q ss_pred hHHHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------HH---------------HHH--
Q psy16105 15 FTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF---------------------------LG---------------AVA-- 50 (130)
Q Consensus 15 ~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~---------------------------~~---------------~~~-- 50 (130)
+.....|.++.+++++.+.|...+...+..+ +. ...
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLF 374 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 4556778888999999999998877654443 00 000
Q ss_pred --HHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 51 --SLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 51 --~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
+.+.....+...+.+++.+|++++|+.+|.......++..++|++...+.+.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~ 428 (496)
T PRK03893 375 FQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR 428 (496)
T ss_pred HHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence 0011122455667888999999999999999999999999999999988875
No 54
>PRK10504 putative transporter; Provisional
Probab=97.56 E-value=0.0023 Score=51.95 Aligned_cols=67 Identities=10% Similarity=0.076 Sum_probs=51.5
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPAL 123 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~ 123 (130)
.+...|...+.+++..|++++|+.+|......+++..++|++...+.+.. .| ...|.+...+..+..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~--gw-~~~f~~~~~~~~l~~ 178 (471)
T PRK10504 112 GAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA--SW-HWIFLINIPVGIIGA 178 (471)
T ss_pred hHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc--cH-HHHHHHHHHHHHHHH
Confidence 45567889999999999999999999999999999999999998887642 12 235555554444333
No 55
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.55 E-value=0.0014 Score=43.24 Aligned_cols=75 Identities=16% Similarity=0.206 Sum_probs=56.8
Q ss_pred HHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q psy16105 49 VASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIF 126 (130)
Q Consensus 49 ~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~ 126 (130)
..+...+...|...+.+++..|++++|+..+.......++..++|.+...+.+. .-....|++.+.+...+.+..
T Consensus 60 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 60 LQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF---LGWRAPFLFLAILALAAFILL 134 (141)
T ss_pred HHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc---cchHHHHHHHHHHHHHHHHHH
Confidence 344455677899999999999999999999999999999999999999988743 112345666555555544443
No 56
>KOG2532|consensus
Probab=97.53 E-value=0.0012 Score=55.03 Aligned_cols=65 Identities=17% Similarity=0.275 Sum_probs=52.9
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhcccc-CCchHHHHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDF-MPSTFLLMSLVLT 119 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~-~pg~~f~~~a~l~ 119 (130)
..+...|++.++.+|..|++|+++..++..+-..++++++-|+.+.+=+. +. ||...|+.+..-.
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s--~~GW~sifY~~g~~g~ 206 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES--SLGWPSIFYVFGIVGL 206 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc--CCCCchHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999888655 33 7765555444333
No 57
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.52 E-value=0.003 Score=55.50 Aligned_cols=76 Identities=11% Similarity=0.056 Sum_probs=62.7
Q ss_pred HHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHhc
Q psy16105 50 ASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFLCH 129 (130)
Q Consensus 50 ~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~~~ 129 (130)
.+.+.+...|.+.+.++..+|.++||+.+|.......++.+++|++...++.. .+..||++.+++.+++.++..++
T Consensus 658 ~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~----~~~~pf~i~a~~lll~~ll~~~L 733 (742)
T TIGR01299 658 FGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI----TKAAPILFASAALACGGLLALKL 733 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHhC
Confidence 34445667889999999999999999999999999999999999999888765 25678888888777766665543
No 58
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.52 E-value=0.0011 Score=59.84 Aligned_cols=91 Identities=10% Similarity=0.037 Sum_probs=72.2
Q ss_pred cchhHHHHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------HH------------
Q psy16105 12 QGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------LG------------ 47 (130)
Q Consensus 12 ~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------~~------------ 47 (130)
.+....+..|.++.++.++.++|.+.+..++..+ +.
T Consensus 242 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 321 (1140)
T PRK06814 242 AVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQ 321 (1140)
T ss_pred HHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccccccccccc
Confidence 3445667888999999999999999877654443 00
Q ss_pred --------------------HHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 48 --------------------AVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 48 --------------------~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
..++.+.+...+.+.+++.+.+|++++|+++|+.+....++..+++++...++..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~ 396 (1140)
T PRK06814 322 LKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQAL 396 (1140)
T ss_pred ccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0123334566778999999999999999999999999999999999999988754
No 59
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.51 E-value=0.001 Score=51.16 Aligned_cols=90 Identities=12% Similarity=0.102 Sum_probs=64.9
Q ss_pred chhHHHHHhhhhhccccchhHHHHHHHHHHHHH-----------------------------------------------
Q psy16105 13 GEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF----------------------------------------------- 45 (130)
Q Consensus 13 g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~----------------------------------------------- 45 (130)
+.......|.++++++++.+.+...+...+..+
T Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (379)
T TIGR00881 234 GILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMD 313 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHH
Confidence 344455677788899999998887766543322
Q ss_pred --HHHHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 46 --LGAVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 46 --~~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
.....+.+.....+...+..++.+|++++|+.+|+.+....++..++|++...+.+.
T Consensus 314 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 372 (379)
T TIGR00881 314 LICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG 372 (379)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh
Confidence 000111112233455667889999999999999999999999999999999988775
No 60
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.51 E-value=0.0039 Score=49.36 Aligned_cols=87 Identities=11% Similarity=0.216 Sum_probs=65.3
Q ss_pred hHHHHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHH
Q psy16105 15 FTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVA 50 (130)
Q Consensus 15 ~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~ 50 (130)
......|.+ ++|+++.+.|...+...+... .-...
T Consensus 26 ~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 104 (381)
T PRK03633 26 NTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVA 104 (381)
T ss_pred HHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 344445554 689999999999988765443 11112
Q ss_pred HHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 51 SLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
+...+...|...+.+.+..+++|+|+.+|......+++..++|++...+.+.
T Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 105 GIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 2233556777788888999999999999999999999999999999887654
No 61
>TIGR00895 2A0115 benzoate transport.
Probab=97.48 E-value=0.0015 Score=50.66 Aligned_cols=49 Identities=8% Similarity=0.053 Sum_probs=43.0
Q ss_pred HHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHH
Q psy16105 51 SLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAV 99 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~i 99 (130)
+...+...|...+.+++.+|++++|+.+|.......++..++|++...+
T Consensus 349 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 349 GFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 3345677899999999999999999999999999999999999987754
No 62
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.47 E-value=0.0053 Score=49.18 Aligned_cols=58 Identities=12% Similarity=0.038 Sum_probs=43.6
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHH
Q psy16105 59 IAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLT 119 (130)
Q Consensus 59 p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~ 119 (130)
+...+.+++..|++|||+..+..+....++.++++++...+-+. ..|.. .|++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~--~gWr~-~f~~~~~l~ 154 (368)
T TIGR00903 97 LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA--GGLQL-LIIPIAAVA 154 (368)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cchHH-HHHHHHHHH
Confidence 34456668899999999999999999999999999988887542 23554 444444444
No 63
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.47 E-value=0.0042 Score=50.61 Aligned_cols=83 Identities=8% Similarity=0.064 Sum_probs=64.0
Q ss_pred HHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHH
Q psy16105 19 YLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFS 54 (130)
Q Consensus 19 ~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~ 54 (130)
.-+.++.+++++.+.+...+...+... .....+...
T Consensus 43 ~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~ 122 (496)
T PRK03893 43 LTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGM 122 (496)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 344567899999999988877654332 001122223
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYT 101 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~ 101 (130)
+...|+..+++.+..|++++|+..+......+++.+++|++...+.+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 169 (496)
T PRK03893 123 AGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP 169 (496)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55678888999999999999999999999999999999999988765
No 64
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.46 E-value=0.0058 Score=49.52 Aligned_cols=89 Identities=12% Similarity=0.041 Sum_probs=67.1
Q ss_pred hhHHHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------H--------------------
Q psy16105 14 EFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF---------------------------L-------------------- 46 (130)
Q Consensus 14 ~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~---------------------------~-------------------- 46 (130)
..+...-..++.|++++.+.|...+...+... .
T Consensus 21 ~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~ 100 (410)
T TIGR00885 21 ITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVG 100 (410)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 34444555688999999999998876643332 0
Q ss_pred HHHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 47 GAVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 47 ~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
..+.+...+..+++.+..+++..|++++++..+..+...+++..++|.+...+...
T Consensus 101 ~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 101 LFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 01122234677788888999999999999999999999999999999999988654
No 65
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.44 E-value=0.00058 Score=55.82 Aligned_cols=65 Identities=6% Similarity=0.053 Sum_probs=48.6
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccc-cCCchHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLD-FMPSTFLLMSLVLT 119 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~-~~pg~~f~~~a~l~ 119 (130)
++...|...+++++..|++|||+..|..+...++++.+++++...+.+.... .|.+ .|.+.+.+.
T Consensus 136 ~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~-~f~~~g~~~ 201 (467)
T PRK09556 136 QSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIG-MFIFPSIIA 201 (467)
T ss_pred HhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchh-HHHHHHHHH
Confidence 4556788899999999999999999999999999999999987666554221 2444 344444443
No 66
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.44 E-value=0.0055 Score=47.54 Aligned_cols=83 Identities=7% Similarity=0.028 Sum_probs=56.5
Q ss_pred HHHhhhhhccccchhHHHHHHHHHHHHH----------------------------------HHH-----------HHHH
Q psy16105 18 MYLYTRLAFRWNEYNYSTFYTAYYFTDF----------------------------------LGA-----------VASL 52 (130)
Q Consensus 18 ~~ly~~~~f~W~~~~~g~~~~~~~~~~~----------------------------------~~~-----------~~~~ 52 (130)
...|.++.+++|+.+.|+..+...+... ... ..+.
T Consensus 24 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~ 103 (366)
T TIGR00886 24 AVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGI 103 (366)
T ss_pred hhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3345788999999999999877655443 000 1111
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYT 101 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~ 101 (130)
.++ ..+...+.+++..|++|||+..+......+++..+++.+...+..
T Consensus 104 ~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 104 AGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred hch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 122 345567889999999999999999887766666666665555544
No 67
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=97.44 E-value=0.0082 Score=46.63 Aligned_cols=71 Identities=11% Similarity=0.028 Sum_probs=53.5
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHh
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFLC 128 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~~ 128 (130)
.+...|...+...+..| +|+|+.++.......++..++|++...+++.. -....|++.+.+.+.+.++...
T Consensus 302 ~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~---g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 302 IGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAERW---SYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cchhHHHHHHHHHHHHHHHHhe
Confidence 35566777777777775 56789999999999999999999999887652 2345677777777776666543
No 68
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.44 E-value=0.0038 Score=49.79 Aligned_cols=80 Identities=6% Similarity=-0.046 Sum_probs=60.9
Q ss_pred hhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHhhH
Q psy16105 22 TRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSNAS 57 (130)
Q Consensus 22 ~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~ 57 (130)
.++.++|++.+.++..+...+... .-...+...+..
T Consensus 44 i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~ 123 (426)
T PRK12307 44 IKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGE 123 (426)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhH
Confidence 356899999999988776644332 011222234566
Q ss_pred HHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHH
Q psy16105 58 FIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYT 101 (130)
Q Consensus 58 ~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~ 101 (130)
.|...+++++..|+||||+..+......+++.+++|++...+.+
T Consensus 124 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~ 167 (426)
T PRK12307 124 YACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE 167 (426)
T ss_pred HHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc
Confidence 78899999999999999999999999999999999988776643
No 69
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.43 E-value=0.0033 Score=49.59 Aligned_cols=74 Identities=12% Similarity=0.056 Sum_probs=60.4
Q ss_pred HHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHH
Q psy16105 51 SLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~ 127 (130)
+...+...|...+.+.+..|++++|+.++.......++..++|++...+.+. .-....|.+.+++.+.+.++..
T Consensus 322 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~---~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 322 GAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN---YGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh---cchhHHHHHHHHHHHHHHHHHH
Confidence 4445677899999999999999999999999999999999999999988754 2345788888888777666554
No 70
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.42 E-value=0.0017 Score=53.67 Aligned_cols=60 Identities=12% Similarity=0.170 Sum_probs=47.5
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh---ccccCCchHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA---TLDFMPSTFLLM 114 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~---t~~~~pg~~f~~ 114 (130)
++........+++.+|++++|..++..+++.+++..+++.+.+.+++. +-|.+.....++
T Consensus 366 g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i 428 (468)
T TIGR00788 366 QLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLI 428 (468)
T ss_pred HHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHH
Confidence 444555689999999999999999999999999999999888888765 224455554444
No 71
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.42 E-value=0.0046 Score=48.92 Aligned_cols=66 Identities=12% Similarity=0.084 Sum_probs=49.3
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSP 121 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~ 121 (130)
..+...+...+.+++..|++||++..+.......++..++|++...+... ..|+. .|++.+.+...
T Consensus 104 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~--~g~~~-~~~~~~~~~~i 169 (392)
T PRK10473 104 GAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK--FPWQS-LFYTMAAMGIL 169 (392)
T ss_pred hhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cChHH-HHHHHHHHHHH
Confidence 34566788889999999999999999999999999999999888776543 12433 44444444433
No 72
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.40 E-value=0.0061 Score=48.26 Aligned_cols=72 Identities=17% Similarity=0.154 Sum_probs=56.5
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~ 127 (130)
..+...|...+...+.+|+|++|+..|.......++..++|++...+.+. .-....|.+.+++.++++++..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~ 386 (399)
T PRK05122 315 GFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW---FGYPSIFLAAALAALLGLALTW 386 (399)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHH
Confidence 34567788888889999999999999999999999999999998888764 1234567777777666655544
No 73
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.37 E-value=0.0063 Score=46.74 Aligned_cols=103 Identities=11% Similarity=0.056 Sum_probs=67.8
Q ss_pred HHHHhhhhhccccchhHHHHHHHHHHHHH-------------------------------------------HH-HHHHH
Q psy16105 17 VMYLYTRLAFRWNEYNYSTFYTAYYFTDF-------------------------------------------LG-AVASL 52 (130)
Q Consensus 17 i~~ly~~~~f~W~~~~~g~~~~~~~~~~~-------------------------------------------~~-~~~~~ 52 (130)
...-+.++.++|++.+.|...+...+... .. ...+.
T Consensus 24 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 103 (377)
T TIGR00890 24 LLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASA 103 (377)
T ss_pred hHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 34556788899999999999888765443 00 11122
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPAL 123 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~ 123 (130)
..+...+.....+++..| ||||+..+......+++.++++++...+.+. ..|+ ..|++.+.+.+...
T Consensus 104 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~-~~f~~~~~~~~~~~ 170 (377)
T TIGR00890 104 GVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINL--EGVP-AAFIYMGIIFLLVI 170 (377)
T ss_pred HHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhc--ccHH-HHHHHHHHHHHHHH
Confidence 233444556666676665 7899999999999999999888888776543 1232 35566555554443
No 74
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.36 E-value=0.0086 Score=47.21 Aligned_cols=66 Identities=5% Similarity=-0.015 Sum_probs=50.9
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
..|...+.+.+.+|+||+|+..|.......++.+++|++...+.+.. -....|++.+.+.+++.++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~ 188 (408)
T PRK09874 123 FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY---GLRPVFFITASVLFLCFLV 188 (408)
T ss_pred hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHH
Confidence 46788889999999999999999999999999999999998887642 1234566666655544443
No 75
>PRK11043 putative transporter; Provisional
Probab=97.36 E-value=0.0072 Score=47.95 Aligned_cols=101 Identities=9% Similarity=0.037 Sum_probs=69.4
Q ss_pred hhhhccccchhHHHHHHHHHHHHH-------------------------------------------HH-HHHHHHHhhH
Q psy16105 22 TRLAFRWNEYNYSTFYTAYYFTDF-------------------------------------------LG-AVASLFSNAS 57 (130)
Q Consensus 22 ~~~~f~W~~~~~g~~~~~~~~~~~-------------------------------------------~~-~~~~~~~~~~ 57 (130)
.++.+++++.+.|...+...+... .. ...+...+..
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~ 111 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSA 111 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHH
Confidence 467899999999999877644332 00 1111222345
Q ss_pred HHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 58 FIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 58 ~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
.+...+++++..|++|+++.++.......++..++|++...+.+.. .|. ..|++.+.+.+...++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~--g~~-~~~~~~~~~~~~~~~~ 176 (401)
T PRK11043 112 AVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF--GWQ-AIFATLFAITLLLILP 176 (401)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ChH-HHHHHHHHHHHHHHHH
Confidence 6777889999999999999999999999999999999998877541 132 4455555554444433
No 76
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.34 E-value=0.01 Score=47.60 Aligned_cols=62 Identities=13% Similarity=-0.006 Sum_probs=48.3
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLT 119 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~ 119 (130)
.+...|...+.+.+.+| |++++..+......+++..++|.+...+++. .-+..++..++++.
T Consensus 319 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~---~g~~~~~~~~~~~~ 380 (394)
T PRK10213 319 FALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDN---IGLTSPLMLSGTLM 380 (394)
T ss_pred HHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cChhhHHHHHHHHH
Confidence 35678888889999996 7788999988889999999999999999975 22344555555444
No 77
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.33 E-value=0.0052 Score=49.10 Aligned_cols=81 Identities=10% Similarity=-0.146 Sum_probs=61.3
Q ss_pred hhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHhh
Q psy16105 21 YTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSNA 56 (130)
Q Consensus 21 y~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~ 56 (130)
-.++.|+||..+.|...+...+... .-...+...+.
T Consensus 34 ~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~ 113 (393)
T PRK09705 34 QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGI 113 (393)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHH
Confidence 3577899999999999887644332 11223444566
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
..|...+++.|..| +|||++.|..+....++..+++++...+.+.
T Consensus 114 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~ 158 (393)
T PRK09705 114 IQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH 158 (393)
T ss_pred HhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77888888888875 8999999999998888999988888776554
No 78
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.32 E-value=0.0082 Score=47.77 Aligned_cols=67 Identities=12% Similarity=0.030 Sum_probs=50.1
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALF 124 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~ 124 (130)
+...|...+.+++..|++|+++..+.......++..++|++...+.+. ..|. ..|++.+++..++.+
T Consensus 116 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~--~~w~-~~~~~~~~~~~~~~~ 182 (406)
T PRK15402 116 CFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV--LPWR-GMFVLFAALAALSFF 182 (406)
T ss_pred hhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cCcc-HHHHHHHHHHHHHHH
Confidence 455688889999999999999999999888888999999998877664 1243 355555555544444
No 79
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.32 E-value=0.0024 Score=49.37 Aligned_cols=50 Identities=20% Similarity=-0.036 Sum_probs=41.4
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHH-HHHHHHhHhhHHHHHHHHHHhc
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAF-MLFEAIAPMIYNPIYNAVYTAT 103 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~-~~~~sl~~~i~~~l~~~iy~~t 103 (130)
.+...|..++.+++.+|+++||+.++.. +....++..++|++...+++..
T Consensus 326 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~ 376 (394)
T TIGR00883 326 GGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMT 376 (394)
T ss_pred HHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHc
Confidence 3466788899999999999999999985 4556688889999999998763
No 80
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.32 E-value=0.0084 Score=49.54 Aligned_cols=71 Identities=7% Similarity=-0.003 Sum_probs=51.1
Q ss_pred HHHHhhHHHHHHHHHhcC-CCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Q psy16105 51 SLFSNASFIAMRAIISKL-TSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALF 124 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~-v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~ 124 (130)
+...+...|...+.+.+. .|++|||+.+|.......++..++|++...+.+.. .|. ..|++...+.+++++
T Consensus 105 G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~--gwr-~~f~i~~~~~~~~~~ 176 (495)
T PRK14995 105 AIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF--YWG-SVFLINVPIVLVVMG 176 (495)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--ChH-HHHHHHHHHHHHHHH
Confidence 444566778777777665 57899999999999999999999999999887641 233 345555544444433
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.32 E-value=0.0074 Score=54.12 Aligned_cols=87 Identities=13% Similarity=0.129 Sum_probs=65.2
Q ss_pred hHHHHHhhhhhccccch-hHHHHHHHHHHHHH--------------------------------------------HHHH
Q psy16105 15 FTVMYLYTRLAFRWNEY-NYSTFYTAYYFTDF--------------------------------------------LGAV 49 (130)
Q Consensus 15 ~~i~~ly~~~~f~W~~~-~~g~~~~~~~~~~~--------------------------------------------~~~~ 49 (130)
...+..|.++.+++++. +.|++.+..++..+ ....
T Consensus 252 ~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (1146)
T PRK08633 252 QANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFL 331 (1146)
T ss_pred HHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 44556677888999999 88888776654433 1122
Q ss_pred HHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHH
Q psy16105 50 ASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYT 101 (130)
Q Consensus 50 ~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~ 101 (130)
.+.+.++..+..++++.+.+|++++|+.+|+.+.+..++.++++.+...+..
T Consensus 332 ~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 332 FGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333466778889999999999999999999999999999887777665543
No 82
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.31 E-value=0.013 Score=48.63 Aligned_cols=72 Identities=18% Similarity=0.247 Sum_probs=58.5
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHh
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFLC 128 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~~ 128 (130)
.++..++..+...+.++++..|+.+|..++..++++.+++++...+++.. .| ...|.+.+.+.++++++..+
T Consensus 330 ~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~--G~-~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 330 GGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH--GW-PTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred HHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--Ch-HHHHHHHHHHHHHHHHHHHH
Confidence 35667778889999999999999999999999999999999999998853 13 34677788888877766654
No 83
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.27 E-value=0.011 Score=47.32 Aligned_cols=102 Identities=9% Similarity=0.039 Sum_probs=68.6
Q ss_pred hHHHHHhhhhhccccchhHHHHHHHHHHHHH-------------------------------------------HHHHHH
Q psy16105 15 FTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF-------------------------------------------LGAVAS 51 (130)
Q Consensus 15 ~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~-------------------------------------------~~~~~~ 51 (130)
......|.++.++.++.++|+..+..++..+ ...+.+
T Consensus 225 ~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~G 304 (393)
T PRK11195 225 RFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILMGLVVLLMALQHSLLPAYPLLILIG 304 (393)
T ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3344467788899999999999876554332 011223
Q ss_pred HHHhhHHHHHHHHHhcCCCccc-hHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHH
Q psy16105 52 LFSNASFIAMRAIISKLTSAEE-LGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVL 118 (130)
Q Consensus 52 ~~~~~~~p~~rs~iSk~v~~~e-qG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l 118 (130)
...+...+..++.+.+..|+|. +|+..++.+..+.++..++..++..+....++ |-..|...+.+
T Consensus 305 ~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 370 (393)
T PRK11195 305 ALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVP--VVAVIVGFGLL 370 (393)
T ss_pred HhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCC--HHHHHHHHHHH
Confidence 3345667778888887655543 69999999999999999999888877555333 33444444444
No 84
>PRK12382 putative transporter; Provisional
Probab=97.24 E-value=0.0043 Score=49.06 Aligned_cols=71 Identities=15% Similarity=0.255 Sum_probs=56.8
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~ 127 (130)
.+...|...+...+..|+|++|+.+|..+....++..++|++...+.+. .-....|.+.+++.+++.++..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 316 CSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS---FGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCchHHHHHHHHHHHHHHHHHH
Confidence 4566788889999999999999999999999999999999999988875 2234566677666666655544
No 85
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.22 E-value=0.018 Score=45.83 Aligned_cols=64 Identities=13% Similarity=0.110 Sum_probs=44.1
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q psy16105 59 IAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIF 126 (130)
Q Consensus 59 p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~ 126 (130)
+......++..| +++|+..+..+....++..++|.+...+++.. .+ ..+|++.+.+.+.++++.
T Consensus 324 ~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~--g~-~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK15011 324 GIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW--NY-HAVFWFALVMIIATLFCL 387 (393)
T ss_pred HHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh--hh-HHHHHHHHHHHHHHHHHH
Confidence 334444556665 67999999999999999999999999998751 13 345555555555544443
No 86
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.22 E-value=0.0097 Score=50.22 Aligned_cols=115 Identities=11% Similarity=0.091 Sum_probs=76.0
Q ss_pred ccchhHHHHHhhhhhccccchh-HHHHHHHHHH----HHH----------------------------------------
Q psy16105 11 YQGEFTVMYLYTRLAFRWNEYN-YSTFYTAYYF----TDF---------------------------------------- 45 (130)
Q Consensus 11 ~~g~~~i~~ly~~~~f~W~~~~-~g~~~~~~~~----~~~---------------------------------------- 45 (130)
+....++..-|.++.+||+++| +|...+.... ..+
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i 120 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQL 120 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444566677888899999999 7776654321 111
Q ss_pred HHHHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 46 LGAVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 46 ~~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
+=...+..++... +..+.+++.+|++|+|++.|...+...++.++++++...+-+..-..+..+ +.++-+...+++++
T Consensus 121 ~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~L-n~Isl~s~~~a~~~ 198 (511)
T TIGR00806 121 MEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTL-NIISLVFMTFSVFL 198 (511)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHH-HHHHHHHHHHHHHH
Confidence 0022344455556 899999999999999999999999999999999999998433211112222 23344444555544
Q ss_pred HH
Q psy16105 126 FL 127 (130)
Q Consensus 126 ~~ 127 (130)
..
T Consensus 199 a~ 200 (511)
T TIGR00806 199 AL 200 (511)
T ss_pred HH
Confidence 43
No 87
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.22 E-value=0.00085 Score=53.82 Aligned_cols=109 Identities=8% Similarity=0.074 Sum_probs=69.9
Q ss_pred cchhHHHHHhhhhhccccchhHHHHHHHHHHHHH--------------------H-----HHHHH--HH-----------
Q psy16105 12 QGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------L-----GAVAS--LF----------- 53 (130)
Q Consensus 12 ~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------~-----~~~~~--~~----------- 53 (130)
......+..|.++++||++.+.|...+...+... . +.... ..
T Consensus 27 ~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (420)
T PRK09528 27 SSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNI 106 (420)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456778888899999999999999988776555 0 00000 00
Q ss_pred ------Hhh--------HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHH
Q psy16105 54 ------SNA--------SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLT 119 (130)
Q Consensus 54 ------~~~--------~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~ 119 (130)
.++ ..|......++. ++|+|+.+|......+++..++|++.+.+++. .+..+|++.+.+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~----~~~~~f~~~~~~~ 180 (420)
T PRK09528 107 LLGAIVGGIYLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFNI----NPQINFWLGSGSA 180 (420)
T ss_pred HHHHHHHHHHhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHhc----CchHhHHHHHHHH
Confidence 000 011122222111 35678888999999999999999999988763 2456788777766
Q ss_pred HHHHHHH
Q psy16105 120 SPALFIF 126 (130)
Q Consensus 120 ~~~~~l~ 126 (130)
+.++++.
T Consensus 181 ~~~~~~~ 187 (420)
T PRK09528 181 LILLVLL 187 (420)
T ss_pred HHHHHHH
Confidence 5555443
No 88
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.21 E-value=0.0045 Score=48.97 Aligned_cols=66 Identities=12% Similarity=0.021 Sum_probs=52.3
Q ss_pred HHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q psy16105 58 FIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIF 126 (130)
Q Consensus 58 ~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~ 126 (130)
.|.....+++..|+++||+..+.......++++++|.+.+.+++. ...+.+|++.+++.+.+.++.
T Consensus 401 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~---~~~~~~f~~~~~~~~~~~i~~ 466 (481)
T TIGR00879 401 GPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES---IGVGGVFIFFGGLNVLGLIFV 466 (481)
T ss_pred cCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCccceehhHHHHHHHHHHHH
Confidence 355667778999999999999999999999999999999998876 234556777776665555444
No 89
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.20 E-value=0.0077 Score=47.93 Aligned_cols=47 Identities=11% Similarity=0.090 Sum_probs=37.4
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhcc
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATL 104 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~ 104 (130)
..|...+. +..++++|+|++.++.+..+.++..+++.+.+.+|..+-
T Consensus 326 ~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 372 (406)
T PRK15402 326 ANAGLYRL-TLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGG 372 (406)
T ss_pred HhhhHHHH-HhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 34444443 345667999999999999999999999999999987743
No 90
>PRK03699 putative transporter; Provisional
Probab=97.20 E-value=0.018 Score=45.81 Aligned_cols=106 Identities=12% Similarity=0.108 Sum_probs=70.0
Q ss_pred hHHHHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHH
Q psy16105 15 FTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVA 50 (130)
Q Consensus 15 ~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~ 50 (130)
......|.++++++|+++.|...+...+... .....
T Consensus 225 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (394)
T PRK03699 225 ISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGL 304 (394)
T ss_pred HHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 3445678888999999999988765433322 11112
Q ss_pred HHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Q psy16105 51 SLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALF 124 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~ 124 (130)
+...+...|...+...+..| ++.++..|.......++..++|++...+++.. -....|++.+++.+++.+
T Consensus 305 G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~---g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 305 GFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHF---GLQAALLTANGLYAVVFV 374 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh---CchhhhhhhHHHHHHHHH
Confidence 22234455667777777665 45678888888888999999999999998862 123455555555555443
No 91
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.18 E-value=0.017 Score=46.19 Aligned_cols=112 Identities=8% Similarity=-0.037 Sum_probs=73.6
Q ss_pred chhHHHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------HH----------------HH
Q psy16105 13 GEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF---------------------------LG----------------AV 49 (130)
Q Consensus 13 g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~---------------------------~~----------------~~ 49 (130)
+.......|.++ +++++.+.|...+..++..+ .+ .+
T Consensus 223 ~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 301 (393)
T PRK09705 223 SLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLWAMV 301 (393)
T ss_pred HHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 334445566665 79999999988877665444 00 01
Q ss_pred HHHHHhhHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHH
Q psy16105 50 ASLFSNASFIAMRAIISKLT-SAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 50 ~~~~~~~~~p~~rs~iSk~v-~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~ 127 (130)
.+...+...|.......+.. |++++|+.+|....+..++..++|++...+.+.+=+ -+..|.+.++.....+++..
T Consensus 302 ~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~--~~~~~~~~~~~~~~~~~~~~ 378 (393)
T PRK09705 302 CGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGN--YLMDWAFHALCVVGLMIITL 378 (393)
T ss_pred HHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--chHHHHHHHHHHHHHHHHHH
Confidence 11112334465555555555 467889999999999999999999999999887422 35666666666655554443
No 92
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.17 E-value=0.016 Score=45.78 Aligned_cols=97 Identities=16% Similarity=0.087 Sum_probs=67.6
Q ss_pred hhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHhh
Q psy16105 21 YTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSNA 56 (130)
Q Consensus 21 y~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~ 56 (130)
+..+.+++|+.+.|...+...+... .....+...+.
T Consensus 33 ~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ 112 (394)
T PRK11652 33 DMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGV 112 (394)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhH
Confidence 3467899999999998877654433 00112222345
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHH
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTS 120 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~ 120 (130)
..|..+.+..+..+++|+++..+.......++..++|++...+.+.. .|. ..|++.+.+.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~--g~~-~~f~~~~~~~~ 173 (394)
T PRK11652 113 GGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF--GWR-ACYLFLLLLGA 173 (394)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ChH-HHHHHHHHHHH
Confidence 56778888888899999999999999999999999999998876531 233 44555444443
No 93
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.17 E-value=0.0056 Score=48.93 Aligned_cols=46 Identities=11% Similarity=-0.008 Sum_probs=36.9
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhH-hhHHHHHHHHHHh
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAP-MIYNPIYNAVYTA 102 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~-~i~~~l~~~iy~~ 102 (130)
..|...+.+.+.+|+||||+..|..+...+++. +++|++...+++.
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~ 168 (402)
T TIGR00897 122 FAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA 168 (402)
T ss_pred HHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 455566777888999999999999999999986 5788877766543
No 94
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.12 E-value=0.0072 Score=50.36 Aligned_cols=112 Identities=10% Similarity=0.103 Sum_probs=75.0
Q ss_pred ccchhHHHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------------------------
Q psy16105 11 YQGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------- 45 (130)
Q Consensus 11 ~~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------- 45 (130)
+.+.+..+..|.++.+|+++++.+...+.......
T Consensus 30 ~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~ 109 (489)
T PRK10207 30 YYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIF 109 (489)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHH
Confidence 34567788899999999999998766544331111
Q ss_pred HH-HHHHHHHhhHHHHHHHHHhcCCCccc--hHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHH
Q psy16105 46 LG-AVASLFSNASFIAMRAIISKLTSAEE--LGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPA 122 (130)
Q Consensus 46 ~~-~~~~~~~~~~~p~~rs~iSk~v~~~e--qG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~ 122 (130)
.+ ...+...+...|...+++++..|+|| +++.++......+++..++|.+...+-+. .+ |+ ..|++.+......
T Consensus 110 ~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~-~g-w~-~~F~i~~i~~~~~ 186 (489)
T PRK10207 110 IALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK-FG-YS-VTYNLCGAGLIIA 186 (489)
T ss_pred HHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh-hC-hH-HHHHHHHHHHHHH
Confidence 00 11223346678888999999998874 58899999999999999999988877443 23 32 3455554433333
Q ss_pred HHH
Q psy16105 123 LFI 125 (130)
Q Consensus 123 ~~l 125 (130)
++.
T Consensus 187 ~~~ 189 (489)
T PRK10207 187 LLV 189 (489)
T ss_pred HHH
Confidence 333
No 95
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=97.11 E-value=0.016 Score=46.94 Aligned_cols=67 Identities=10% Similarity=-0.065 Sum_probs=48.7
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPAL 123 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~ 123 (130)
+...|...+.+++..|++|||+..|..+...+++..++|++......... .|. ..|++.+.+.+++.
T Consensus 133 g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-~w~-~~f~~~~~~~~i~~ 199 (438)
T TIGR00712 133 GMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN-DWH-AALYFPAICAIIVA 199 (438)
T ss_pred hcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh-hhH-HHHHHHHHHHHHHH
Confidence 34457777888999999999999999999999999999988765443321 243 35666555554433
No 96
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.00 E-value=0.013 Score=47.30 Aligned_cols=88 Identities=9% Similarity=0.114 Sum_probs=64.2
Q ss_pred hHHHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------H---------------------
Q psy16105 15 FTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF---------------------------L--------------------- 46 (130)
Q Consensus 15 ~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~---------------------------~--------------------- 46 (130)
......|.++.+++++.+.|+......+..+ .
T Consensus 275 ~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (485)
T TIGR00711 275 FYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALP 354 (485)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHH
Confidence 4455667888899999999988876544332 0
Q ss_pred HHHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 47 GAVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 47 ~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
..+.+...+...+.......+.+|++++|+..|.......++..+++.+.+.+++.
T Consensus 355 ~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 355 QFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111223344556666677778999999999999999999999999999888763
No 97
>PRK10504 putative transporter; Provisional
Probab=96.94 E-value=0.039 Score=44.74 Aligned_cols=50 Identities=12% Similarity=0.039 Sum_probs=43.7
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
..++..|...++..+.+|++++|..+|..+..+.++..+++.+.+.+++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 366 VNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred HHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556788889999999999999999999999999999999998888665
No 98
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=96.92 E-value=0.044 Score=44.62 Aligned_cols=63 Identities=10% Similarity=-0.024 Sum_probs=45.1
Q ss_pred HHHHhcCCCccchHHHHHHHHHHHHHhHh-hHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHH
Q psy16105 62 RAIISKLTSAEELGKVMSAFMLFEAIAPM-IYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 62 rs~iSk~v~~~eqG~~~~~~~~~~sl~~~-i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~ 127 (130)
.....+.+|++++|+..|..+....++.. .+|.+...+++.. --...|++.+++.+++++...
T Consensus 369 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~---g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 369 GLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF---GWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh---cchHHHHHHHHHHHHHHHHHH
Confidence 34567889999999999999988888765 4788898888763 134456566665555555444
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=96.90 E-value=0.015 Score=48.41 Aligned_cols=110 Identities=12% Similarity=0.092 Sum_probs=72.2
Q ss_pred cchhHHHHHhhhhhccccchhHHHHHHHHHHHH-----H----------------------------------------H
Q psy16105 12 QGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTD-----F----------------------------------------L 46 (130)
Q Consensus 12 ~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~-----~----------------------------------------~ 46 (130)
.+.......|..+.+||++.+.+...+...... . .
T Consensus 38 y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~ 117 (500)
T PRK09584 38 YGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYM 117 (500)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 455667778888899999888765543322111 0 0
Q ss_pred H-HHHHHHHhhHHHHHHHHHhcCCCccc--hHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Q psy16105 47 G-AVASLFSNASFIAMRAIISKLTSAEE--LGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPAL 123 (130)
Q Consensus 47 ~-~~~~~~~~~~~p~~rs~iSk~v~~~e--qG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~ 123 (130)
+ ...+...++..|...+++++..|++| +++.++......+++..++|++...+.+. .--...|.+.++...+++
T Consensus 118 ~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~---~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 118 GMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK---YGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHH
Confidence 0 11223345667888899999987654 45688888899999999999999988764 112455666665544444
Q ss_pred H
Q psy16105 124 F 124 (130)
Q Consensus 124 ~ 124 (130)
+
T Consensus 195 i 195 (500)
T PRK09584 195 V 195 (500)
T ss_pred H
Confidence 3
No 100
>KOG4686|consensus
Probab=96.90 E-value=0.0047 Score=49.61 Aligned_cols=111 Identities=10% Similarity=0.115 Sum_probs=76.5
Q ss_pred HHHHhhhhhccccchhHHHHHHHHHHHHH------------------------------------------HH-HHHHHH
Q psy16105 17 VMYLYTRLAFRWNEYNYSTFYTAYYFTDF------------------------------------------LG-AVASLF 53 (130)
Q Consensus 17 i~~ly~~~~f~W~~~~~g~~~~~~~~~~~------------------------------------------~~-~~~~~~ 53 (130)
+...+..+|||.++.+.|-..+....+.. .+ +.++.-
T Consensus 286 lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~lGLs 365 (459)
T KOG4686|consen 286 LGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSMTFLGLS 365 (459)
T ss_pred hhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHHHHHHhhh
Confidence 33455688999999999888877654443 11 111111
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhcccc-CCchHHHHHHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDF-MPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~-~pg~~f~~~a~l~~~~~~l~~ 127 (130)
..+...++.-.+...||+++.|..+|.++++++++--+.|.+...+-+..-++ +-.+.|+....+.+....++.
T Consensus 366 ysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~ 440 (459)
T KOG4686|consen 366 YSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILF 440 (459)
T ss_pred HHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHh
Confidence 23344456678888999999999999999999999999999888776553322 556667666666665555544
No 101
>TIGR00901 2A0125 AmpG-related permease.
Probab=96.90 E-value=0.0059 Score=47.58 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=29.6
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEA 86 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~s 86 (130)
.+...|+.++++++.+|+|+||+.+|..+++.+
T Consensus 323 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 323 GGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred hHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 367899999999999999999999999988765
No 102
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=96.88 E-value=0.012 Score=46.64 Aligned_cols=65 Identities=14% Similarity=0.116 Sum_probs=45.1
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPAL 123 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~ 123 (130)
.+...|..++++... ++|+++.++......+++..++|++...+++. +-...+|++.+...+..+
T Consensus 108 ~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~---~g~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 108 FSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW---FGEQAILWILTAGVASML 172 (382)
T ss_pred HcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH---cChhHHHHHHHHHHHHHH
Confidence 345566667766654 45678888888888899999999999999876 222345666555444333
No 103
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=96.86 E-value=0.039 Score=44.57 Aligned_cols=69 Identities=12% Similarity=-0.059 Sum_probs=51.7
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
.+...+..++.+....|++|+++..+.......+++.++|++...+.+. .-....|++.+++.+++.++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~---~gw~~~f~~~~~~~~i~~~~ 186 (413)
T PRK15403 118 ICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF---VHWKVLFAIIAVMGLIAFVG 186 (413)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHH
Confidence 3445666678888889999999999999999999999999988877643 11234677766666555544
No 104
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=96.86 E-value=0.021 Score=44.50 Aligned_cols=88 Identities=6% Similarity=-0.078 Sum_probs=61.6
Q ss_pred HHHHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHH
Q psy16105 16 TVMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVAS 51 (130)
Q Consensus 16 ~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~ 51 (130)
.....|.++ .++|+++.|...+..++..+ ...+.+
T Consensus 218 ~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 296 (355)
T TIGR00896 218 GWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWAWALVLG 296 (355)
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 344566665 69999999988877655444 001122
Q ss_pred HHHhhHHHHHHHHHhcC-CCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhcc
Q psy16105 52 LFSNASFIAMRAIISKL-TSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATL 104 (130)
Q Consensus 52 ~~~~~~~p~~rs~iSk~-v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~ 104 (130)
...+...|...+.+... .+++++|...+..++...++..++|++...+++.+-
T Consensus 297 ~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 297 LGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22345567777766644 456778999999999999999999999999987753
No 105
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=96.86 E-value=0.07 Score=42.57 Aligned_cols=68 Identities=16% Similarity=0.233 Sum_probs=45.3
Q ss_pred hHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q psy16105 56 ASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIF 126 (130)
Q Consensus 56 ~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~ 126 (130)
+......+...+.+.++..++.++..++.++++.++++++...+++. .-....|.+++.+.++++++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~---~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 319 MGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEA---YGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHH
Confidence 33444455555555555555566777777888888888888888876 344566777777776665543
No 106
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=96.85 E-value=0.05 Score=44.46 Aligned_cols=65 Identities=6% Similarity=-0.039 Sum_probs=46.5
Q ss_pred HHHhcCCCccchHHHHHHHHHHHHH-hHhhHHHHHHHHHHhc----------cccCCchHHHHHHHHHHHHHHHHHh
Q psy16105 63 AIISKLTSAEELGKVMSAFMLFEAI-APMIYNPIYNAVYTAT----------LDFMPSTFLLMSLVLTSPALFIFLC 128 (130)
Q Consensus 63 s~iSk~v~~~eqG~~~~~~~~~~sl-~~~i~~~l~~~iy~~t----------~~~~pg~~f~~~a~l~~~~~~l~~~ 128 (130)
....+.+|++++|...|+......+ +..++|++...+.+.+ ...|. ..|.+.++..+++.++..+
T Consensus 372 ~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~-~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 372 VAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWA-GTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChH-HHHHHHHHHHHHHHHHHHH
Confidence 4566889999999999999999997 7799999999999821 12233 3445555555555555443
No 107
>PRK11663 regulatory protein UhpC; Provisional
Probab=96.81 E-value=0.041 Score=44.56 Aligned_cols=57 Identities=11% Similarity=0.090 Sum_probs=42.9
Q ss_pred HHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHH
Q psy16105 62 RAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSP 121 (130)
Q Consensus 62 rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~ 121 (130)
....++..|++++|+..|..+....++..++|+++..+.+.. .+++ .|.+.+++.++
T Consensus 359 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~--g~~~-~f~~~~~~~~~ 415 (434)
T PRK11663 359 GMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW--HWTG-FFVVISIAAGI 415 (434)
T ss_pred HHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc--ccHH-HHHHHHHHHHH
Confidence 344567778999999999999999999999999999998752 2444 44555444433
No 108
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.78 E-value=0.023 Score=47.81 Aligned_cols=113 Identities=12% Similarity=0.127 Sum_probs=76.6
Q ss_pred ccchhHHHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------------HH----------
Q psy16105 11 YQGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF---------------------------------LG---------- 47 (130)
Q Consensus 11 ~~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~---------------------------------~~---------- 47 (130)
+.+....+.+|.++.+++++.+.+...+....... ++
T Consensus 25 ~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~ 104 (493)
T PRK15462 25 FYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLY 104 (493)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 34567788889888999999998877665543321 00
Q ss_pred --H-HHHHHHhhHHHHHHHHHhcCCCcc--chHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHH
Q psy16105 48 --A-VASLFSNASFIAMRAIISKLTSAE--ELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPA 122 (130)
Q Consensus 48 --~-~~~~~~~~~~p~~rs~iSk~v~~~--eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~ 122 (130)
. .+....+...|...+++++..|++ +|++.++......+++..++|.+...+-+.. .| ...|.+++...+.+
T Consensus 105 l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~--Gw-~~~F~iaaigm~l~ 181 (493)
T PRK15462 105 LSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY--SW-AMGFGLAAVGMIAG 181 (493)
T ss_pred HHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh--Ch-HHHHHHHHHHHHHH
Confidence 0 011122455687889999999875 6999999999999999999999999885431 12 33456555544544
Q ss_pred HHHH
Q psy16105 123 LFIF 126 (130)
Q Consensus 123 ~~l~ 126 (130)
++.+
T Consensus 182 li~~ 185 (493)
T PRK15462 182 LVIF 185 (493)
T ss_pred HHHH
Confidence 4443
No 109
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=96.78 E-value=0.042 Score=44.68 Aligned_cols=67 Identities=9% Similarity=-0.007 Sum_probs=43.2
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPA 122 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~ 122 (130)
.+...|.....+++..|++|||+..|.......++..+.+++........ ..|. ..|++.+.+.++.
T Consensus 134 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-~gw~-~~f~i~~~~~~~~ 200 (452)
T PRK11273 134 QGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF-NDWH-AALYMPAFAAILV 200 (452)
T ss_pred HhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh-ccHH-HHHHHHHHHHHHH
Confidence 34455777788889999999999999998888888755555433222111 1232 4566665555443
No 110
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=96.76 E-value=0.034 Score=43.31 Aligned_cols=83 Identities=7% Similarity=-0.052 Sum_probs=57.3
Q ss_pred HHhhhhhccccchhHHHHHHHHHHHHH---------------------------HH----------------HHHHHHHh
Q psy16105 19 YLYTRLAFRWNEYNYSTFYTAYYFTDF---------------------------LG----------------AVASLFSN 55 (130)
Q Consensus 19 ~ly~~~~f~W~~~~~g~~~~~~~~~~~---------------------------~~----------------~~~~~~~~ 55 (130)
.-..++.+++++.+.|+..+...+... .+ ...+...+
T Consensus 23 lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~g~~ 102 (355)
T TIGR00896 23 LPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIRSAPGTALLFAGTALIGVGIA 102 (355)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 334677899999999999877654433 00 01122223
Q ss_pred hHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 56 ASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 56 ~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
...+...+.+.+.. ++|+|+..|..+....++..+++++...+.+.
T Consensus 103 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 103 IINVLLPSLIKRDF-PQRVGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred HHhccchHHHHHhC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455556666666 47999999999999999999999888777544
No 111
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=96.75 E-value=0.0029 Score=50.32 Aligned_cols=109 Identities=10% Similarity=0.142 Sum_probs=69.3
Q ss_pred ccchhHHHHHhhhhhccccchhHHHHHHHHHHHHH-----------------------HH----HH-H------------
Q psy16105 11 YQGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF-----------------------LG----AV-A------------ 50 (130)
Q Consensus 11 ~~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~-----------------------~~----~~-~------------ 50 (130)
.......+..|.++++++++.+.|...+...+... .. .. .
T Consensus 18 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (396)
T TIGR00882 18 MSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSN 97 (396)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 33445567778889999999999999888766554 00 00 0
Q ss_pred --------HHHH----hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHH
Q psy16105 51 --------SLFS----NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVL 118 (130)
Q Consensus 51 --------~~~~----~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l 118 (130)
..+. +...|...+...+.. +|+++.+|......+++..++|++...++.. .+..+|++.+.+
T Consensus 98 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~----~~~~~f~~~~~~ 171 (396)
T TIGR00882 98 ILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSI----DPQIVFWLGSGF 171 (396)
T ss_pred HHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhcc----CchHHHHHHHHH
Confidence 0001 112344444444432 3456778888888889999999998877643 355688887777
Q ss_pred HHHHHHH
Q psy16105 119 TSPALFI 125 (130)
Q Consensus 119 ~~~~~~l 125 (130)
.+...++
T Consensus 172 ~~~~~~~ 178 (396)
T TIGR00882 172 ALILMLL 178 (396)
T ss_pred HHHHHHH
Confidence 6555433
No 112
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=96.73 E-value=0.023 Score=45.05 Aligned_cols=58 Identities=12% Similarity=0.053 Sum_probs=42.5
Q ss_pred hHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHH
Q psy16105 56 ASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVL 118 (130)
Q Consensus 56 ~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l 118 (130)
...|...++..+ .++|+|+.+|......+++.+++|++...+.+.. .|. ..|.+.+.+
T Consensus 110 ~~~p~~~al~~~--~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~--g~~-~~f~~~~~~ 167 (382)
T TIGR00902 110 AGMPIGDALANT--WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF--DEQ-NILAILTAG 167 (382)
T ss_pred cchhHHHHHHHH--HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc--Chh-HHHHHHHHH
Confidence 346777777644 3578899999999999999999999999988751 133 345554444
No 113
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=96.67 E-value=0.043 Score=44.38 Aligned_cols=69 Identities=10% Similarity=0.032 Sum_probs=47.9
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhc----cc--cCCchHHHHHHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTAT----LD--FMPSTFLLMSLVLTSPALF 124 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t----~~--~~pg~~f~~~a~l~~~~~~ 124 (130)
+...|...+.+++..|++|||+..+..+....++.++++.+...+.... .+ .| ..+|++.+...++..+
T Consensus 135 g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gW-r~~f~~~~~~~~~~~~ 209 (479)
T PRK10077 135 GLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGW-RYMFASEAIPALLFLM 209 (479)
T ss_pred hHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCCh-HHHHHHHHHHHHHHHH
Confidence 4567888999999999999999999999999999988866554433211 11 13 2356666555544443
No 114
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=96.64 E-value=0.034 Score=45.49 Aligned_cols=66 Identities=11% Similarity=-0.015 Sum_probs=47.9
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALF 124 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~ 124 (130)
+...|...+++.+.. ++|+|+..|.......++..++|++...+.+. +--..+|++.+++.+.+.+
T Consensus 123 ~~~~~~~~~~~~~~~-~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~---~gwr~~f~~~~~~~~~~~v 188 (455)
T TIGR00892 123 AFNFQPSLTMLGKYF-YRRRPLANGLAMAGSPVFLSTLAPLNQYLFES---FGWRGSFLILGGLLLHCCV 188 (455)
T ss_pred hhhhhHHHHHHHHHH-HhhHHHHHHHHHhcccHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHH
Confidence 333355557777877 48999999999999999999999998888764 1223567777766654443
No 115
>TIGR00898 2A0119 cation transport protein.
Probab=96.62 E-value=0.036 Score=45.34 Aligned_cols=68 Identities=6% Similarity=-0.004 Sum_probs=49.6
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIF 126 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~ 126 (130)
..+...|...+++++.+|+++||+..+..+...+++.+++|.+...+-+ | ...|++.+...++..+..
T Consensus 193 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-----w-r~~~~~~~i~~~~~~~~~ 260 (505)
T TIGR00898 193 GIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD-----W-RWLQLAVSLPTFLFFLLS 260 (505)
T ss_pred hccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH-----H-HHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999999999999999889998888877655433 3 234555555544444433
No 116
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=96.62 E-value=0.03 Score=46.31 Aligned_cols=88 Identities=9% Similarity=0.040 Sum_probs=65.6
Q ss_pred hHHHHHhhhhhccccchhHHHHHHHHHHHHH-----------------------------------------------HH
Q psy16105 15 FTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF-----------------------------------------------LG 47 (130)
Q Consensus 15 ~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~-----------------------------------------------~~ 47 (130)
......|.++.+++++.+.|.......+... ..
T Consensus 279 ~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 358 (495)
T PRK14995 279 ELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLM 358 (495)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 3444566777789999999998865443322 01
Q ss_pred HHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 48 AVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 48 ~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
...+...+...|.....+.+.+|+|++|...+..+....++..+++.+.+.+++.
T Consensus 359 ~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 359 ALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122234566777888888899999999999999999999999999988888765
No 117
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=96.53 E-value=0.071 Score=42.10 Aligned_cols=43 Identities=9% Similarity=0.060 Sum_probs=39.3
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIY 96 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~ 96 (130)
.+...|...+.+++..|++|||+..+..+....++..+++++.
T Consensus 141 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 141 VGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred hhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 4566788899999999999999999999999999999999987
No 118
>PRK12307 putative sialic acid transporter; Provisional
Probab=96.49 E-value=0.038 Score=44.00 Aligned_cols=44 Identities=7% Similarity=-0.121 Sum_probs=38.6
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 59 IAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 59 p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
+.....+.+.+|++++|+..|+...+..++..++|++.+.+...
T Consensus 340 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~ 383 (426)
T PRK12307 340 GLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT 383 (426)
T ss_pred HHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc
Confidence 44556778999999999999999999999999999999988755
No 119
>PTZ00207 hypothetical protein; Provisional
Probab=96.49 E-value=0.11 Score=44.74 Aligned_cols=65 Identities=11% Similarity=0.168 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALF 124 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~ 124 (130)
+...++....+.+..| +|||++.|+......++..+.++++..++... .+..|++.+.+.++..+
T Consensus 135 ~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~----~~~~fl~l~vl~~vv~l 199 (591)
T PTZ00207 135 MLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDN----TSAYFFFLMSFALVVGI 199 (591)
T ss_pred HHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----HHHHHHHHHHHHHHHHH
Confidence 3445566667777774 78899999999999999999888888887642 23455555555444333
No 120
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=96.48 E-value=0.15 Score=39.63 Aligned_cols=40 Identities=10% Similarity=-0.056 Sum_probs=26.7
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHH
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYN 97 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~ 97 (130)
..|.......+.. |+++|+..+..+........+.+++.+
T Consensus 317 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 317 ISSIAMAYALEDF-PHVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHhccC-cccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455545555554 478999999988887765556666655
No 121
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=96.48 E-value=0.026 Score=46.70 Aligned_cols=54 Identities=9% Similarity=0.042 Sum_probs=47.8
Q ss_pred HHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHH
Q psy16105 48 AVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYT 101 (130)
Q Consensus 48 ~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~ 101 (130)
...+..+.+..|...++++|..|++.||+.+|......++++.+++.+.+....
T Consensus 389 ~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~ 442 (475)
T TIGR00924 389 LFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAV 442 (475)
T ss_pred HHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345566789999999999999999999999999999999999999998886653
No 122
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=96.44 E-value=0.019 Score=51.94 Aligned_cols=55 Identities=13% Similarity=-0.075 Sum_probs=49.3
Q ss_pred HHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 48 AVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 48 ~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
.+.+..++...|+.++++.+.++++|+++..|..+...+++.+++|++...+...
T Consensus 116 ~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~ 170 (1140)
T PRK06814 116 FLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS 170 (1140)
T ss_pred HHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3445556788999999999999999999999999999999999999999999764
No 123
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=96.43 E-value=0.13 Score=40.70 Aligned_cols=48 Identities=6% Similarity=-0.101 Sum_probs=39.5
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
.+...|...+...+..| +++|+..++.+..+.++..+++.+...+...
T Consensus 313 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 313 AGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 35568888888888775 6889999999999999999999988776433
No 124
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=96.43 E-value=0.074 Score=47.81 Aligned_cols=53 Identities=17% Similarity=0.204 Sum_probs=47.2
Q ss_pred HHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 50 ASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 50 ~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
.+...++..|+..+++++.+|++|+|+..|..+...+++.+++|++...+...
T Consensus 113 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 113 LGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34456778899999999999999999999999999999999999999988764
No 125
>KOG2533|consensus
Probab=96.42 E-value=0.015 Score=49.02 Aligned_cols=81 Identities=16% Similarity=0.222 Sum_probs=64.9
Q ss_pred HHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh----ccccCCchHHHHHHHHH-HHH
Q psy16105 48 AVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA----TLDFMPSTFLLMSLVLT-SPA 122 (130)
Q Consensus 48 ~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~----t~~~~pg~~f~~~a~l~-~~~ 122 (130)
...+.+++..-|+...++++..+++|||+.+|+..+..++++++++.+...+++. ....| +..|++.+++. ..+
T Consensus 142 ~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW-~~~FiI~G~i~~~~g 220 (495)
T KOG2533|consen 142 FLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGW-RWLFIIEGVITLVLG 220 (495)
T ss_pred HHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCc-eeehhHHHHHHHHHH
Confidence 4567788899999999999999999999999999999999999999999998872 22223 46788877776 455
Q ss_pred HHHHHhc
Q psy16105 123 LFIFLCH 129 (130)
Q Consensus 123 ~~l~~~~ 129 (130)
++++.|+
T Consensus 221 i~~f~~l 227 (495)
T KOG2533|consen 221 IVVFFFL 227 (495)
T ss_pred heEEEEe
Confidence 5555443
No 126
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=96.40 E-value=0.12 Score=43.20 Aligned_cols=42 Identities=12% Similarity=0.096 Sum_probs=31.5
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHH----hHhhHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAI----APMIYNPIY 96 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl----~~~i~~~l~ 96 (130)
+...|.....+++..|++|||+.+|+.+...++ ++++.|++.
T Consensus 142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i 187 (462)
T PRK15034 142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVI 187 (462)
T ss_pred HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 456677888899999999999999999655544 445555544
No 127
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=96.33 E-value=0.18 Score=44.63 Aligned_cols=48 Identities=13% Similarity=0.113 Sum_probs=41.7
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVY 100 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy 100 (130)
..+...|...++++...|+++||+..+.......++.++++.+...+.
T Consensus 268 g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 268 GIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678999999999999999999999999999999999988766554
No 128
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=96.30 E-value=0.15 Score=42.08 Aligned_cols=39 Identities=8% Similarity=0.043 Sum_probs=30.8
Q ss_pred HHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHH
Q psy16105 61 MRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAV 99 (130)
Q Consensus 61 ~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~i 99 (130)
....+++..|++|||+..|.......++..+++.+...+
T Consensus 144 ~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i 182 (476)
T PLN00028 144 CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLV 182 (476)
T ss_pred HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788999999999999999887777777776655444
No 129
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=96.30 E-value=0.19 Score=39.74 Aligned_cols=73 Identities=14% Similarity=0.017 Sum_probs=52.9
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHh
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFLC 128 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~~ 128 (130)
+.....|...++..+..+++|++...+......+++.++++.+...+.+. .-...+|++.+++.+...+...+
T Consensus 110 ~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~---~gw~~~f~~~a~l~~~~~~~~~~ 182 (390)
T TIGR02718 110 ASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK---FGQRPAFLLVACVPLASLVCVLW 182 (390)
T ss_pred HHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHHHHH
Confidence 44567777888888888888888887777777788888888777777654 33456888888877665555443
No 130
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=96.19 E-value=0.14 Score=42.11 Aligned_cols=71 Identities=14% Similarity=0.111 Sum_probs=55.7
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~ 127 (130)
.+...+...++..|+||||+|||..+.+..-.+++.+++.|+.+.+=+. -.|. ..|++.+++-+++++..+
T Consensus 115 ~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~--~GWR-~~F~~ia~l~ll~~~~~~ 185 (394)
T COG2814 115 HGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQL--FGWR-ATFLAIAVLALLALLLLW 185 (394)
T ss_pred HHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHH--hhHH-HHHHHHHHHHHHHHHHHH
Confidence 4778889999999999999999999999999999999999999977332 0133 466666666655555443
No 131
>PRK10054 putative transporter; Provisional
Probab=96.18 E-value=0.05 Score=43.58 Aligned_cols=69 Identities=10% Similarity=0.067 Sum_probs=52.4
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
......|..++.+.+.+|++.+|+.++..+ ...++..++|++...+++. .-|...|++.+.+...+.++
T Consensus 311 g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~---~g~~~~~~~~~~~~~~~~~~ 379 (395)
T PRK10054 311 GEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTT---LPPWSLFVILALAIVAAWLL 379 (395)
T ss_pred HHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHH---cChhhHHHHHHHHHHHHHHH
Confidence 345667899999999999999999998654 6668999999999999986 34555666655555444443
No 132
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=96.18 E-value=0.14 Score=40.83 Aligned_cols=84 Identities=11% Similarity=0.137 Sum_probs=57.3
Q ss_pred HHHhhhhhccccchhHHHHHHHHHHHHH-------------------------HH-------------------------
Q psy16105 18 MYLYTRLAFRWNEYNYSTFYTAYYFTDF-------------------------LG------------------------- 47 (130)
Q Consensus 18 ~~ly~~~~f~W~~~~~g~~~~~~~~~~~-------------------------~~------------------------- 47 (130)
...|..+.++.++.+.|...+...+.+. .+
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 101 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVY 101 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 4455677899999999999988776665 00
Q ss_pred -----HHHHHHHhhHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHhHhhHHHHHHHHHH
Q psy16105 48 -----AVASLFSNASFIAMRAIISKLT-SAEELGKVMSAFMLFEAIAPMIYNPIYNAVYT 101 (130)
Q Consensus 48 -----~~~~~~~~~~~p~~rs~iSk~v-~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~ 101 (130)
.+.+...+...+..+++.+... |++||+++.+..+....++.++++.+...+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~ 161 (437)
T TIGR00792 102 AYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVS 161 (437)
T ss_pred HHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011111223345567777766 67999999999998888888887776666654
No 133
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.14 E-value=0.087 Score=41.19 Aligned_cols=90 Identities=7% Similarity=0.015 Sum_probs=62.8
Q ss_pred ccchhHHHHHhhhhh--ccccchhHHHHHHHHHHHHH-------------------------------------------
Q psy16105 11 YQGEFTVMYLYTRLA--FRWNEYNYSTFYTAYYFTDF------------------------------------------- 45 (130)
Q Consensus 11 ~~g~~~i~~ly~~~~--f~W~~~~~g~~~~~~~~~~~------------------------------------------- 45 (130)
-.+..+....|.+++ +++++++.+...+......+
T Consensus 156 e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~~ 235 (310)
T TIGR01272 156 EVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAMW 235 (310)
T ss_pred HHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 344556677888754 89999999998877644333
Q ss_pred HHHHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 46 LGAVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 46 ~~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
....++.+.+...|...+...+..|++ .|+.-+.. .+..++..+.|++...+-+.
T Consensus 236 ~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~ 290 (310)
T TIGR01272 236 FVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADC 290 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHh
Confidence 111234455788999999999988653 45555554 56778999999998888764
No 134
>PRK09528 lacY galactoside permease; Reviewed
Probab=96.12 E-value=0.14 Score=40.94 Aligned_cols=66 Identities=8% Similarity=0.045 Sum_probs=46.1
Q ss_pred HHHHHHHHHhcCCCccchHHHHHH-HHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSA-FMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~-~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
..+.....+++..|++.++..++. .+....++..++|++...+++.. -....|.+.+++.++..++
T Consensus 332 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~---G~~~~f~~~~~~~~i~~~~ 398 (420)
T PRK09528 332 LLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI---GFQGTYLILGGIVLLFTLI 398 (420)
T ss_pred HHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh---CchHHHHHHHHHHHHHHHH
Confidence 344455677888899998888765 56677899999999999998752 2345666666655444433
No 135
>PRK10091 MFS transport protein AraJ; Provisional
Probab=96.07 E-value=0.41 Score=37.88 Aligned_cols=56 Identities=16% Similarity=0.089 Sum_probs=35.7
Q ss_pred HHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHH
Q psy16105 63 AIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPA 122 (130)
Q Consensus 63 s~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~ 122 (130)
....+..+++++|...+ .....++..++|++...+++.+.+ + ...|.+.+++..+.
T Consensus 313 ~~~~~~~~~~~~~~~~~--~~~~~~g~~~Gp~~~G~l~~~~~~-~-~~~~~~~~~~~~~~ 368 (382)
T PRK10091 313 LLLQNAKGGELLGAAGG--QIAFNLGSAIGAYCGGMMLTLGLA-Y-NYVALPAALLSFAA 368 (382)
T ss_pred HHHHhCCcchHHHHHHH--HHHHHHHHHHHHHHhHHHHHcccC-c-chHHHHHHHHHHHH
Confidence 34444455666776543 456789999999999999987533 2 34555555555433
No 136
>KOG3764|consensus
Probab=96.06 E-value=0.039 Score=45.79 Aligned_cols=70 Identities=16% Similarity=0.112 Sum_probs=56.8
Q ss_pred hhHHHHHHHHHhcCCCc-cchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSA-EELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~-~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~ 127 (130)
.....+=-+++.|..|+ +|||+++|..-..-+++-+++||....+|.. .-..+||++.+++.+....+..
T Consensus 174 A~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~---~Gk~aPFlVL~~v~Lld~~L~l 244 (464)
T KOG3764|consen 174 AFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF---AGKSAPFLVLAIVLLLDGALQL 244 (464)
T ss_pred HHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh---cCCcCcHHHHHHHHHHHHHHHH
Confidence 34555556778887755 5679999999999999999999999999987 4567899999999877666544
No 137
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=95.94 E-value=0.072 Score=41.65 Aligned_cols=54 Identities=11% Similarity=0.039 Sum_probs=48.3
Q ss_pred HHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 49 VASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 49 ~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
+++...++.+++.+..++..-|+|++.+.++..+...+++.+++|.+.+.+...
T Consensus 19 ~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~ 72 (310)
T TIGR01272 19 VLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILS 72 (310)
T ss_pred HHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 445567889999999999999999999999999999999999999999987743
No 138
>PRK15075 citrate-proton symporter; Provisional
Probab=95.93 E-value=0.25 Score=39.91 Aligned_cols=49 Identities=16% Similarity=-0.009 Sum_probs=36.5
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHH-HhHhhHHHHHHHHHHhc
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEA-IAPMIYNPIYNAVYTAT 103 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~s-l~~~i~~~l~~~iy~~t 103 (130)
+...|.....+++.+|++++|..++....+.. ++..++|++...+-+..
T Consensus 346 g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 346 GSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred HHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc
Confidence 34456667788999999999999998655444 45777888888776653
No 139
>PRK11010 ampG muropeptide transporter; Validated
Probab=95.92 E-value=0.09 Score=43.64 Aligned_cols=75 Identities=17% Similarity=0.097 Sum_probs=57.4
Q ss_pred HHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 49 VASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 49 ~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
+.+.+.+...|...++.++..|+||||+..+.......++.++++++...+.+... .| ..+|++.+.+.++..+.
T Consensus 116 l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~-GW-r~~f~i~a~l~ll~~l~ 190 (491)
T PRK11010 116 VIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYL-GW-QGMYWLMAALLIPCIIA 190 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CH-HHHHHHHHHHHHHHHHH
Confidence 44556778899999999999999999999999999999999999998888876211 13 34666666665554443
No 140
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=95.91 E-value=0.35 Score=39.77 Aligned_cols=104 Identities=14% Similarity=0.024 Sum_probs=81.2
Q ss_pred hhhhccccchhHHHHHHHHHHHHH-----------------------------------------HHHHHHHHHhhHHHH
Q psy16105 22 TRLAFRWNEYNYSTFYTAYYFTDF-----------------------------------------LGAVASLFSNASFIA 60 (130)
Q Consensus 22 ~~~~f~W~~~~~g~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~p~ 60 (130)
.++..+-++++.++.+-..|+..+ ........+-...|.
T Consensus 238 L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~ 317 (394)
T COG2814 238 LESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADRGPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPA 317 (394)
T ss_pred HHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhh
Confidence 466778899899988877776554 111111234456777
Q ss_pred HHHHHhcCCC--ccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHh
Q psy16105 61 MRAIISKLTS--AEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFLC 128 (130)
Q Consensus 61 ~rs~iSk~v~--~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~~ 128 (130)
.++...+..+ ||+++...+.+.+.-+++.-++..+.+.+++. .-.+...++++.+.+.++++..|
T Consensus 318 ~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~---~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 318 LQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA---LGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred hhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHHHHHHHHHH
Confidence 7777777776 79999999999999999999999999999998 66778889999998888888765
No 141
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=95.83 E-value=0.03 Score=46.53 Aligned_cols=47 Identities=15% Similarity=0.090 Sum_probs=42.8
Q ss_pred HHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHH
Q psy16105 51 SLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYN 97 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~ 97 (130)
+.+++..-|.+...+++..|++|||+..|+=+..+++++.+.|++.+
T Consensus 128 g~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~ 174 (448)
T COG2271 128 GWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVAL 174 (448)
T ss_pred HHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHH
Confidence 34567788999999999999999999999999999999999999884
No 142
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=95.82 E-value=0.21 Score=39.77 Aligned_cols=50 Identities=10% Similarity=0.032 Sum_probs=42.8
Q ss_pred HHhhHHHHHHHHHhcCCC-------ccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 53 FSNASFIAMRAIISKLTS-------AEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~-------~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
..+...|...+++++.+| ++++|..+|+.+....++..+++.+...+++.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~ 380 (437)
T TIGR00792 324 GQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGI 380 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678889999999886 45689999999999999999999999988765
No 143
>TIGR00898 2A0119 cation transport protein.
Probab=95.48 E-value=0.42 Score=39.10 Aligned_cols=70 Identities=10% Similarity=-0.068 Sum_probs=52.9
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHh
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFLC 128 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~~ 128 (130)
.....+......+...|++.||+..|..+....++.+++|.+.. +-. ..+..++++.+++.+.+.++..+
T Consensus 424 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~ 493 (505)
T TIGR00898 424 ITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE----KWLFLPLVLFGGLALLAGILTLF 493 (505)
T ss_pred HHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH----HHHhhHHHHHHHHHHHHHHHHHc
Confidence 34556788889999999999999999999999999999999887 321 23455677766666555554443
No 144
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=95.41 E-value=0.5 Score=38.17 Aligned_cols=69 Identities=10% Similarity=0.040 Sum_probs=49.1
Q ss_pred HHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhc--c-ccCCchHHHHHHHHHHHHHHHH
Q psy16105 58 FIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTAT--L-DFMPSTFLLMSLVLTSPALFIF 126 (130)
Q Consensus 58 ~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t--~-~~~pg~~f~~~a~l~~~~~~l~ 126 (130)
.|...+.+++..|+++||+..|.......++.++++.++..+.... . +......|++.+++.+.+.++.
T Consensus 382 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
T PRK10077 382 GPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFM 453 (479)
T ss_pred cchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHH
Confidence 3778899999999999999999999999999999988776554211 1 1223445666565555444443
No 145
>PRK09952 shikimate transporter; Provisional
Probab=95.36 E-value=1.1 Score=36.25 Aligned_cols=69 Identities=7% Similarity=-0.120 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHH-HHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLF-EAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALF 124 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~-~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~ 124 (130)
+...+...+++++.+|++.++...|....+ ..++..++|.+...+++.+-+.+. .++...+++.+++.+
T Consensus 358 ~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~-~~~~~~~~~~~i~~v 427 (438)
T PRK09952 358 DMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWH-SVAIYLLAGCLISAM 427 (438)
T ss_pred HHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCch-HHHHHHHHHHHHHHH
Confidence 344677889999999999999888886655 448889999999999876533343 334444444444433
No 146
>PRK10133 L-fucose transporter; Provisional
Probab=95.31 E-value=0.87 Score=37.20 Aligned_cols=80 Identities=15% Similarity=0.169 Sum_probs=58.0
Q ss_pred hhhhhccccchhHHHHHHHHHHHHH---------------------------HH--------------------HHHHHH
Q psy16105 21 YTRLAFRWNEYNYSTFYTAYYFTDF---------------------------LG--------------------AVASLF 53 (130)
Q Consensus 21 y~~~~f~W~~~~~g~~~~~~~~~~~---------------------------~~--------------------~~~~~~ 53 (130)
..++.|+.|+.+.|...+...+... ++ .+.+..
T Consensus 51 ~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g 130 (438)
T PRK10133 51 QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAG 130 (438)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 3488999999999999876543332 00 112333
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVY 100 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy 100 (130)
.+...++.+..+.+..|++|+++..+..+...+++..++|.+...+-
T Consensus 131 ~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 131 LGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778888888887766666666899999999999999998876543
No 147
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=95.20 E-value=1.5 Score=36.18 Aligned_cols=46 Identities=7% Similarity=-0.010 Sum_probs=35.8
Q ss_pred HHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhc
Q psy16105 58 FIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTAT 103 (130)
Q Consensus 58 ~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t 103 (130)
.+.....+++..|++.+|+..|....+..+...++|.+.+.+.+.+
T Consensus 360 ~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~ 405 (490)
T PRK10642 360 TGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST 405 (490)
T ss_pred HHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455667778899999999999866666677788899988887653
No 148
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=95.13 E-value=0.51 Score=37.41 Aligned_cols=72 Identities=8% Similarity=0.009 Sum_probs=48.6
Q ss_pred HHHHhhHHHHHHHHHhcC----CCccchHHHHHH-HHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 51 SLFSNASFIAMRAIISKL----TSAEELGKVMSA-FMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~----v~~~eqG~~~~~-~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
..+.+...|...+...+. .|++.++..++. .+....++..++|++...+++.. -....|.+.+.+..+..++
T Consensus 314 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~---G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 314 KMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI---GFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc---ccHHHHHHHHHHHHHHHHH
Confidence 344567777776655544 455666666665 56788999999999999999863 2356777777666554444
No 149
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=94.93 E-value=0.11 Score=44.91 Aligned_cols=50 Identities=6% Similarity=-0.024 Sum_probs=44.6
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
..+...|...+.++..+|++++|+..|.......+++.+++++...+.+.
T Consensus 185 G~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 185 GATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQI 234 (633)
T ss_pred cCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Confidence 34566788899999999999999999999999999999999998887654
No 150
>PRK11043 putative transporter; Provisional
Probab=94.82 E-value=0.93 Score=35.84 Aligned_cols=47 Identities=11% Similarity=0.036 Sum_probs=36.7
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYT 101 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~ 101 (130)
.+...|...+...+.. |+++|+..|..+.+.......++++.+.+.+
T Consensus 310 ~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 310 NGAIYPIVVAQALRPF-PQATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHhhhC-cccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 3556677766666666 4689999999999998888888888887754
No 151
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=94.71 E-value=0.49 Score=38.24 Aligned_cols=59 Identities=10% Similarity=-0.046 Sum_probs=41.0
Q ss_pred HHHhcCCCccchHHHHHHHHHHHHHhH-hhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Q psy16105 63 AIISKLTSAEELGKVMSAFMLFEAIAP-MIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALF 124 (130)
Q Consensus 63 s~iSk~v~~~eqG~~~~~~~~~~sl~~-~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~ 124 (130)
....+..|++++|+..|..+....++. .++|.+...+.+.. -....|.+.+++.+.+++
T Consensus 368 ~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~---g~~~~~~~~~~~~~~~~~ 427 (438)
T TIGR00712 368 LHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF---GWDGGFMVMIGGSILAVI 427 (438)
T ss_pred HHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc---cchHHHHHHHHHHHHHHH
Confidence 456788899999999999988877764 67888888877642 123455555554444433
No 152
>KOG2504|consensus
Probab=94.68 E-value=0.21 Score=42.23 Aligned_cols=57 Identities=26% Similarity=0.457 Sum_probs=46.9
Q ss_pred HHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhcccc-----CCchHHHHHHHHH
Q psy16105 63 AIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDF-----MPSTFLLMSLVLT 119 (130)
Q Consensus 63 s~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~-----~pg~~f~~~a~l~ 119 (130)
-++.+.++.|+....+|.....++++.+++||+...+|+.+-++ +-|...++++.+.
T Consensus 411 ~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~ 472 (509)
T KOG2504|consen 411 VILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLL 472 (509)
T ss_pred HHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHH
Confidence 47789999999999999999999999999999999998887542 5555555555444
No 153
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=94.56 E-value=0.056 Score=44.65 Aligned_cols=122 Identities=11% Similarity=0.067 Sum_probs=84.3
Q ss_pred EEEEcccccchhHHHHHhhhhhccccchhHHHHHHHHHHHHH-----------------------H--------------
Q psy16105 4 VVVLNGPYQGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF-----------------------L-------------- 46 (130)
Q Consensus 4 ~~~~~~~~~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~-----------------------~-------------- 46 (130)
|+..++.|.|....+..|.++.|+-|+.+.|.+-+...+... .
T Consensus 227 Y~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~ 306 (417)
T COG2223 227 YFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLT 306 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHcccc
Confidence 455678889999999999999999999999977766554443 0
Q ss_pred --------------HHHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHH
Q psy16105 47 --------------GAVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFL 112 (130)
Q Consensus 47 --------------~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f 112 (130)
-..+..+.++.+-++.-++...- ++|.|.+-|..+.+.+++...=|..+...|+.|=+ +...|
T Consensus 307 ~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if-~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~--~~~~f 383 (417)
T COG2223 307 GFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIF-PKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS--YTGAF 383 (417)
T ss_pred ccccCcchHHHHHHHHHHHHHhccCcchheeechHHH-HhhhhHHHHHHHHhccccccchhHHHHHHHHhccc--HHHHH
Confidence 01111122222223332333222 56999999999999999999999999999998753 33456
Q ss_pred HHHHHHHHHHHHHHHh
Q psy16105 113 LMSLVLTSPALFIFLC 128 (130)
Q Consensus 113 ~~~a~l~~~~~~l~~~ 128 (130)
.+-..+.+.+.++.++
T Consensus 384 ~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 384 MLLLAFYLVALVLTWA 399 (417)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6666666666666654
No 154
>PRK09669 putative symporter YagG; Provisional
Probab=94.55 E-value=1.6 Score=35.26 Aligned_cols=83 Identities=16% Similarity=0.080 Sum_probs=56.6
Q ss_pred HHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------------------------------
Q psy16105 17 VMYLYTRLAFRWNEYNYSTFYTAYYFTDF--------------------------------------------------- 45 (130)
Q Consensus 17 i~~ly~~~~f~W~~~~~g~~~~~~~~~~~--------------------------------------------------- 45 (130)
....|..+.+++++.+.|..+++.-+.+.
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 34455567899999999999988877766
Q ss_pred ----HHHHHHHHHhhHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHhHhhHHHHHHHH
Q psy16105 46 ----LGAVASLFSNASFIAMRAIISKLT-SAEELGKVMSAFMLFEAIAPMIYNPIYNAV 99 (130)
Q Consensus 46 ----~~~~~~~~~~~~~p~~rs~iSk~v-~~~eqG~~~~~~~~~~sl~~~i~~~l~~~i 99 (130)
...+.............++.+... +++||+++.+.-.....++..+++.+...+
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl 169 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPL 169 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111122345555667777776 679999998888888888777776654443
No 155
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.55 E-value=0.89 Score=37.35 Aligned_cols=63 Identities=17% Similarity=0.257 Sum_probs=41.4
Q ss_pred HHHHHHHHHhcCC--CccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHH
Q psy16105 57 SFIAMRAIISKLT--SAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPA 122 (130)
Q Consensus 57 ~~p~~rs~iSk~v--~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~ 122 (130)
..-..-++.+... +|+++|++++......+++.+++..+...+++. .-|...|.+.+.+..+.
T Consensus 103 ~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~---~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 103 ADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS---FGPQGVFLISAALPLLM 167 (433)
T ss_pred HHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc---CCCeEEehHHHHHHHHH
Confidence 3344444444443 334499999999999999999998888777665 23444566666554433
No 156
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=94.40 E-value=0.41 Score=39.06 Aligned_cols=47 Identities=15% Similarity=0.081 Sum_probs=41.9
Q ss_pred hHHHHHHHHHhcCCCccchHHHHHHHHHH-HHHhHhhHHHHHHHHHHh
Q psy16105 56 ASFIAMRAIISKLTSAEELGKVMSAFMLF-EAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 56 ~~~p~~rs~iSk~v~~~eqG~~~~~~~~~-~sl~~~i~~~l~~~iy~~ 102 (130)
+..++....+.+.+|+|.+++.|+..+.+ ..++..++..+...+|+.
T Consensus 317 ~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~ 364 (400)
T PF03825_consen 317 LFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDA 364 (400)
T ss_pred HHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 45677889999999999999999998876 569999999999999987
No 157
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=94.39 E-value=2.2 Score=34.37 Aligned_cols=65 Identities=6% Similarity=-0.027 Sum_probs=39.7
Q ss_pred HHHHHHHHhcCCCccchHHHHHHHHHHHHH-hHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 58 FIAMRAIISKLTSAEELGKVMSAFMLFEAI-APMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 58 ~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl-~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
.+......++..|++.||...|....+.++ .....|.+.. +.+.+ . .....++..++..+++.+.
T Consensus 354 ~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~-~l~~~-g-~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 354 TSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL-SLKSI-G-METAFFWYVTLMAVVAFLV 419 (432)
T ss_pred HHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH-HHHHh-C-CCcHHHHHHHHHHHHHHHH
Confidence 344566778999999999999999877654 2444555455 44433 2 2234455555555544443
No 158
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=94.25 E-value=0.41 Score=38.87 Aligned_cols=56 Identities=11% Similarity=0.081 Sum_probs=36.4
Q ss_pred ccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Q psy16105 71 AEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIF 126 (130)
Q Consensus 71 ~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~ 126 (130)
++..|.+.|+.+....++++++|.+...+.+.+-..--...|.+.+++.+++.++.
T Consensus 391 ~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~ 446 (465)
T TIGR00894 391 PRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFY 446 (465)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHe
Confidence 45788888888888888888888887766543211101345666666666665544
No 159
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=94.17 E-value=0.35 Score=37.27 Aligned_cols=70 Identities=11% Similarity=0.020 Sum_probs=48.9
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhc----c-ccCCchHHHHHHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTAT----L-DFMPSTFLLMSLVLTSPALF 124 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t----~-~~~pg~~f~~~a~l~~~~~~ 124 (130)
+...|+.++.+++..|++|||+..+..+....++.++++.+...+...- . ..-...+|++.+.+.+.+..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 111 GGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLY 185 (394)
T ss_pred cccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHH
Confidence 3446777889999999999999999999999999999998776553310 0 11112456666555544443
No 160
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=93.96 E-value=0.46 Score=39.62 Aligned_cols=51 Identities=20% Similarity=0.157 Sum_probs=44.4
Q ss_pred HHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHH
Q psy16105 49 VASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAV 99 (130)
Q Consensus 49 ~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~i 99 (130)
+.+..+.+..|...+.++|..|++.+|+++|......++++.++..+.+..
T Consensus 391 l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~ 441 (500)
T PRK09584 391 LQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLM 441 (500)
T ss_pred HHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445567899999999999999999999999999988888998888887744
No 161
>PRK09848 glucuronide transporter; Provisional
Probab=93.92 E-value=0.16 Score=41.11 Aligned_cols=52 Identities=17% Similarity=0.103 Sum_probs=43.4
Q ss_pred HHHHhhHHHHHHHHHhcCCCccc-------hHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 51 SLFSNASFIAMRAIISKLTSAEE-------LGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~v~~~e-------qG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
+...+...|...++.++.+|++| .|..+|+.+..+.++..+++.+...+...
T Consensus 330 g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 330 SIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456778889999999998775 59999999999999999999988887654
No 162
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=93.92 E-value=0.29 Score=41.28 Aligned_cols=80 Identities=13% Similarity=0.108 Sum_probs=56.7
Q ss_pred HHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHH-HHhHhhHHHHHHHHHHhc----------cccCCchHHHHHHHH
Q psy16105 50 ASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFE-AIAPMIYNPIYNAVYTAT----------LDFMPSTFLLMSLVL 118 (130)
Q Consensus 50 ~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~-sl~~~i~~~l~~~iy~~t----------~~~~pg~~f~~~a~l 118 (130)
.+..+-+..|.-.|+++|..|++-+|+++|+--... ++++.++..+.+..-..+ .+.+++....++...
T Consensus 387 ~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 466 (493)
T PRK15462 387 MGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGA 466 (493)
T ss_pred HHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHH
Confidence 444567889999999999999999999999986644 788888888777442211 122334444445444
Q ss_pred HHH-HHHHHHhc
Q psy16105 119 TSP-ALFIFLCH 129 (130)
Q Consensus 119 ~~~-~~~l~~~~ 129 (130)
..+ +++++.|+
T Consensus 467 ~~~~~~~~~~~~ 478 (493)
T PRK15462 467 LACVGVVLMIWL 478 (493)
T ss_pred HHHHHHHHHHHH
Confidence 566 78888886
No 163
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=93.87 E-value=0.45 Score=39.68 Aligned_cols=51 Identities=18% Similarity=0.090 Sum_probs=45.1
Q ss_pred HHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHH
Q psy16105 49 VASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAV 99 (130)
Q Consensus 49 ~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~i 99 (130)
+.+..+.+..|.-.+.+.|.+|++++|.+.|+.....++++.++..+.+..
T Consensus 388 l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 388 FQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445567889999999999999999999999999999999999998887744
No 164
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=93.87 E-value=0.51 Score=39.64 Aligned_cols=74 Identities=19% Similarity=0.164 Sum_probs=53.7
Q ss_pred HHhhHHHHHHHHHhcCCCccch--HHHHHHHHHHHHHhHhhHHHHHHHH--HHh---cccc----CC---chHHHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEEL--GKVMSAFMLFEAIAPMIYNPIYNAV--YTA---TLDF----MP---STFLLMSLVL 118 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eq--G~~~~~~~~~~sl~~~i~~~l~~~i--y~~---t~~~----~p---g~~f~~~a~l 118 (130)
..+..++..|++++..+|+++| ++.++..+...+++.++++.+.... ++. +... .| -..|++++.+
T Consensus 127 ~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~ 206 (477)
T TIGR01301 127 ANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIIL 206 (477)
T ss_pred HHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHH
Confidence 4567888899999999998855 7899999999999999999988754 221 1110 11 1467887777
Q ss_pred HHHHHHHH
Q psy16105 119 TSPALFIF 126 (130)
Q Consensus 119 ~~~~~~l~ 126 (130)
++.+..+-
T Consensus 207 l~i~~l~t 214 (477)
T TIGR01301 207 LAILTYIA 214 (477)
T ss_pred HHHHHHHH
Confidence 76666554
No 165
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=93.69 E-value=2.3 Score=33.01 Aligned_cols=24 Identities=4% Similarity=-0.117 Sum_probs=18.6
Q ss_pred hhhhhccccchhHHHHHHHHHHHH
Q psy16105 21 YTRLAFRWNEYNYSTFYTAYYFTD 44 (130)
Q Consensus 21 y~~~~f~W~~~~~g~~~~~~~~~~ 44 (130)
|.+++++|++++.|...+...+..
T Consensus 220 ~~~~~~g~s~~~~g~~~~~~~~~~ 243 (377)
T PRK11102 220 VYIELNGVSPQNFGYYFALNIVFL 243 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHH
Confidence 556789999999999887765444
No 166
>PRK15075 citrate-proton symporter; Provisional
Probab=93.57 E-value=0.49 Score=38.21 Aligned_cols=44 Identities=7% Similarity=0.003 Sum_probs=37.7
Q ss_pred hHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHH
Q psy16105 56 ASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAV 99 (130)
Q Consensus 56 ~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~i 99 (130)
...|...+.+++.+|++|||+..+..+...+++..+++.+...+
T Consensus 133 ~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l 176 (434)
T PRK15075 133 VELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLL 176 (434)
T ss_pred ccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677889999999999999999999998888888887776655
No 167
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=93.56 E-value=0.81 Score=36.90 Aligned_cols=69 Identities=12% Similarity=0.024 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhc----c-ccCCchHHHHHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTAT----L-DFMPSTFLLMSLVLTSPAL 123 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t----~-~~~pg~~f~~~a~l~~~~~ 123 (130)
+...|...+.+++..|++|||+..+..+.....+.++++.+...+...- . ++-=..+|++.+...++.+
T Consensus 139 g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~ 212 (432)
T PRK10406 139 GGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL 212 (432)
T ss_pred hhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999988888888888776654433210 0 1111356666666554443
No 168
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=93.47 E-value=0.88 Score=37.49 Aligned_cols=55 Identities=9% Similarity=-0.009 Sum_probs=32.0
Q ss_pred CCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccc-cCCchHHHHHHHHHHHHHHHHHh
Q psy16105 69 TSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLD-FMPSTFLLMSLVLTSPALFIFLC 128 (130)
Q Consensus 69 v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~-~~pg~~f~~~a~l~~~~~~l~~~ 128 (130)
++++++|...|.......+++.++|. ++..+.. .+. ..|++.+++.+++.++..+
T Consensus 376 ~~~~~~g~~~g~~~~~g~lg~~i~~~----l~~~~~~~~y~-~~f~~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 376 VSRRSLGVISGLTGAGGNVGAVLTQL----LFFTGSSYSTE-TGISLMGVMIIACTLPVAF 431 (476)
T ss_pred cChhhchhhhhhhhccccHHHHHHHH----HHHhcCCccHh-hHHHHHHHHHHHHHHHHHh
Confidence 34678899888886655555555554 4443221 122 3466666666666666554
No 169
>KOG2325|consensus
Probab=93.46 E-value=0.042 Score=46.28 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=53.3
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Q psy16105 57 SFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPAL 123 (130)
Q Consensus 57 ~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~ 123 (130)
..-+..++-||..+|.+||.++++.+...+.+++++|.+-+.+|.. .-|+.++.+..+..+...
T Consensus 405 ~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~---~g~~~v~~~~~~~~l~~~ 468 (488)
T KOG2325|consen 405 ISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTL---SGPRPVWIILLCLLLVVA 468 (488)
T ss_pred ccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHh---cCccHHHHHHHHHHHHHH
Confidence 3456889999999999999999999999999999999999999988 566666666666554433
No 170
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=93.44 E-value=0.75 Score=37.95 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=41.1
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVY 100 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy 100 (130)
.+...|.....++...|+++||+..+..+....++.++++.+...+.
T Consensus 129 ~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~ 175 (502)
T TIGR00887 129 IGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVL 175 (502)
T ss_pred HhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667889999999999999999999999999999999888876554
No 171
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=93.09 E-value=2.7 Score=34.74 Aligned_cols=70 Identities=13% Similarity=0.092 Sum_probs=46.7
Q ss_pred HhhHHHHHHHHHhcCCCccchHH---HHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGK---VMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~---~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~ 127 (130)
.....++..++..+..+ |||+. +++..-...+++.++++.+...+.+. .-+...|++.+++.++......
T Consensus 134 ~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~---~~~~~~f~~~a~l~ll~~~~~~ 206 (468)
T TIGR00788 134 KALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK---TLTRILFLITAALLLLQLFVSN 206 (468)
T ss_pred HHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh---cCcchHHHHHHHHHHHHHHHHH
Confidence 46677888888888887 55543 45555555667888888888877654 2355677777777655544333
No 172
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=93.01 E-value=1.2 Score=36.79 Aligned_cols=70 Identities=10% Similarity=0.074 Sum_probs=48.4
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhc----c-c-cCCchHHHHHHHHHHHHHH
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTAT----L-D-FMPSTFLLMSLVLTSPALF 124 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t----~-~-~~pg~~f~~~a~l~~~~~~ 124 (130)
.+...|...+++++..|+++||+..+..+....++.++++.+...+...- . + .|. .+|++++.+.+++++
T Consensus 132 ~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR-~~f~i~~~~~l~~~~ 207 (490)
T PRK10642 132 VGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWR-IPFFIALPLGIIGLY 207 (490)
T ss_pred hHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHH-HHHHHHHHHHHHHHH
Confidence 45667888999999999999999999998888888888877665543311 1 1 143 456665544444433
No 173
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=92.84 E-value=3.8 Score=32.19 Aligned_cols=27 Identities=4% Similarity=-0.042 Sum_probs=19.9
Q ss_pred HHhhhhhccccchhHHHHHHHHHHHHH
Q psy16105 19 YLYTRLAFRWNEYNYSTFYTAYYFTDF 45 (130)
Q Consensus 19 ~ly~~~~f~W~~~~~g~~~~~~~~~~~ 45 (130)
..|.++.++++++++|...+..++..+
T Consensus 227 ~~~~~~~~g~~~~~~~~~~~~~~~~~i 253 (392)
T PRK10473 227 PVLLMEQMGFSRGEYAIIMALTAGVSM 253 (392)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 346677899999999988776654443
No 174
>PRK09952 shikimate transporter; Provisional
Probab=92.64 E-value=1.3 Score=35.94 Aligned_cols=66 Identities=9% Similarity=0.053 Sum_probs=47.7
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhcc-----cc-CCchHHHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATL-----DF-MPSTFLLMSLVLTSP 121 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~-----~~-~pg~~f~~~a~l~~~ 121 (130)
+...|+..+.+++..|++|||+..+..+....++.++++++...+.+.-- ++ | ..+|++.+...+.
T Consensus 140 g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gW-r~~f~~~~~~~l~ 211 (438)
T PRK09952 140 GGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGW-RIPFLFSIVLVLI 211 (438)
T ss_pred cccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccCh-HHHHHHHHHHHHH
Confidence 44567888999999999999999999999999999998887766543210 11 3 2466666655433
No 175
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=91.51 E-value=4.5 Score=35.36 Aligned_cols=118 Identities=17% Similarity=0.213 Sum_probs=74.0
Q ss_pred cccchhHHHHHhhhhhccccchhHHHHHHHH----HHHHH----------------------------------------
Q psy16105 10 PYQGEFTVMYLYTRLAFRWNEYNYSTFYTAY----YFTDF---------------------------------------- 45 (130)
Q Consensus 10 ~~~g~~~i~~ly~~~~f~W~~~~~g~~~~~~----~~~~~---------------------------------------- 45 (130)
.+-|+..++.+|..+.++|++++........ .+..+
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~ 81 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGH 81 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccccc
Confidence 3557889999999999999988755443221 11111
Q ss_pred --------HHH-HHHHHHhhHHHHHHHHHhcCCCccc---hHHHHHHHHHHHHHhHhhHHHHHHHHHHhcc--ccCC--c
Q psy16105 46 --------LGA-VASLFSNASFIAMRAIISKLTSAEE---LGKVMSAFMLFEAIAPMIYNPIYNAVYTATL--DFMP--S 109 (130)
Q Consensus 46 --------~~~-~~~~~~~~~~p~~rs~iSk~v~~~e---qG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~--~~~p--g 109 (130)
.+. .+....+...|++.+...++.+++| +-+.|...-...+++.++++++...+-..-- +-.+ .
T Consensus 82 ~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~ 161 (654)
T TIGR00926 82 PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYP 161 (654)
T ss_pred chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchH
Confidence 001 1112236678899999999887654 5567777777888899998888877643210 0012 2
Q ss_pred hHHHHHHHHHHHHHHHHH
Q psy16105 110 TFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 110 ~~f~~~a~l~~~~~~l~~ 127 (130)
..|.+.+++.+++++++.
T Consensus 162 ~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 162 LAFGVPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 456666666666666654
No 176
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=91.28 E-value=0.79 Score=36.66 Aligned_cols=46 Identities=13% Similarity=0.057 Sum_probs=41.1
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVY 100 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy 100 (130)
....|...++.++..|+|++|...|.......++.+++|++...+.
T Consensus 295 ~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 295 LPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred hhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 3455778899999999999999999999999999999999988776
No 177
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=91.08 E-value=4.5 Score=32.71 Aligned_cols=31 Identities=6% Similarity=0.134 Sum_probs=24.7
Q ss_pred hHHHHHhhhhhccccchhHHHHHHHHHHHHH
Q psy16105 15 FTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF 45 (130)
Q Consensus 15 ~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~ 45 (130)
...+..|.++++|.+..|+|+..+...+..+
T Consensus 22 ~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~ 52 (418)
T TIGR00889 22 LVTLGSYMSKTLHFSGAEIGWVYSSTGIAAI 52 (418)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 4556777888999999999999888766554
No 178
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=91.01 E-value=1.7 Score=36.43 Aligned_cols=55 Identities=9% Similarity=0.085 Sum_probs=47.2
Q ss_pred chHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHhc
Q psy16105 73 ELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFLCH 129 (130)
Q Consensus 73 eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~~~ 129 (130)
|-|.+-|..+...++++++-|+++...+..+= -+...|+...+.+..|+++-+|.
T Consensus 399 ~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g--~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 399 ETAAALGFISAIGAVGGFFIPQAFGMSLNMTG--SPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHHHHHHHcccchhhHHHHHHHHHcC--CcHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999988753 36677888888899998888874
No 179
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=90.70 E-value=1.2 Score=37.05 Aligned_cols=44 Identities=18% Similarity=0.074 Sum_probs=31.5
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHH----HhHhhHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEA----IAPMIYNPIYNAV 99 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~s----l~~~i~~~l~~~i 99 (130)
|-....-...+|+..|||+||...|+.+ ..+ +..+++|++....
T Consensus 119 GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 119 GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 3344455578899999999999999999 665 4555556555443
No 180
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=90.45 E-value=8 Score=31.10 Aligned_cols=62 Identities=8% Similarity=0.001 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSP 121 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~ 121 (130)
+...|...+.. ..-++++.|+..|..+.++....-.++.+...++.. ....+|...+++...
T Consensus 327 ~~~~p~~~~~a-l~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 327 GLIFPTLFRFT-LFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN----GGRLPFHLLAVVAGV 388 (413)
T ss_pred HHHhHHHHHHH-hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc----CCchHHHHHHHHHHH
Confidence 45566666422 222344579999999998888888888888888766 345666665555433
No 181
>KOG2615|consensus
Probab=90.18 E-value=0.32 Score=40.36 Aligned_cols=43 Identities=21% Similarity=0.019 Sum_probs=39.1
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHH
Q psy16105 59 IAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYT 101 (130)
Q Consensus 59 p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~ 101 (130)
-.+|+++|..+++++|++.++.++..-+++-++||.+..++=.
T Consensus 139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 4578999999999999999999999999999999999987643
No 182
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=90.13 E-value=2.2 Score=35.33 Aligned_cols=49 Identities=12% Similarity=0.227 Sum_probs=43.4
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
-+..+.+.-+++++.+|||||+|+-++.-++.-++-+++..+++.+.+.
T Consensus 103 ~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~ 151 (403)
T PF03209_consen 103 VHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP 151 (403)
T ss_pred HhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 4677888999999999999999999999999999999988888877654
No 183
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=89.28 E-value=1.5 Score=36.18 Aligned_cols=67 Identities=3% Similarity=-0.130 Sum_probs=48.5
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccc-------cCCchHHHHHHHHHHHHHHH
Q psy16105 59 IAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLD-------FMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 59 p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~-------~~pg~~f~~~a~l~~~~~~l 125 (130)
|......+...|++.||+.+|....+..++.+++|.++..+++.+-. .....+|++.++..+.+.+.
T Consensus 411 ~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 411 ATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred chhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 44455668889999999999999999999999999999988874311 11234566666665555443
No 184
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=89.04 E-value=6.4 Score=30.34 Aligned_cols=42 Identities=17% Similarity=0.318 Sum_probs=31.9
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 59 IAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 59 p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
.++.+-+. .- |++||++-|+.-....++.-+-.-+++.+|+.
T Consensus 116 a~lvt~~~-NF-P~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 116 ASLVTCVR-NF-PRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHH-hC-ccccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 33444443 44 46899999999999999988888888888776
No 185
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=89.03 E-value=0.95 Score=34.93 Aligned_cols=33 Identities=6% Similarity=0.092 Sum_probs=24.9
Q ss_pred chhHHHHHhhhhhccccchhHHHHHHHHHHHHH
Q psy16105 13 GEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF 45 (130)
Q Consensus 13 g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~ 45 (130)
+.......|.++.+++++.+.|.+.+...+..+
T Consensus 243 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 275 (366)
T TIGR00886 243 GVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGS 275 (366)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 445566778899999999999988776655443
No 186
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=89.00 E-value=11 Score=30.67 Aligned_cols=60 Identities=17% Similarity=0.123 Sum_probs=46.0
Q ss_pred cCCCccchHHHHHHHH-HHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHH
Q psy16105 67 KLTSAEELGKVMSAFM-LFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 67 k~v~~~eqG~~~~~~~-~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~ 127 (130)
+-.|+|..+..|+... ..+++..+.+.++.|.+-+. .++.|-.||..+..+..++.++..
T Consensus 153 ~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~-~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 153 RGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW-FGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred cCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH-hCCCCcchHHHHHHHHHHHHHHHH
Confidence 4567888999999888 56778889999988865443 344688999999999877666543
No 187
>PRK10133 L-fucose transporter; Provisional
Probab=88.89 E-value=11 Score=30.64 Aligned_cols=83 Identities=14% Similarity=0.065 Sum_probs=58.1
Q ss_pred HHHhh-hhhccccchhHHHHHHHHHHHHH-------------------------------------------HHHHHHHH
Q psy16105 18 MYLYT-RLAFRWNEYNYSTFYTAYYFTDF-------------------------------------------LGAVASLF 53 (130)
Q Consensus 18 ~~ly~-~~~f~W~~~~~g~~~~~~~~~~~-------------------------------------------~~~~~~~~ 53 (130)
...|. ++.++.++.+.|+..+...+..+ .....+.+
T Consensus 281 ~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg 360 (438)
T PRK10133 281 LIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAF 360 (438)
T ss_pred HHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 34454 45789999999988777654433 00123445
Q ss_pred HhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 54 SNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
.+...|.+.+..-|..|+ +.|..-++.. +...+..+.|++...+.+.
T Consensus 361 ~~~i~P~~~s~a~~~~~~-~~~~as~l~~-~~~~g~~~~~~i~G~l~~~ 407 (438)
T PRK10133 361 MSIQYPTIFSLGIKNLGQ-DTKYGSSFIV-MTIIGGGIVTPVMGFVSDA 407 (438)
T ss_pred HHHHHHHHHHHHHcccch-hhccchhHHh-HHhccchHHHHHHHHHHHh
Confidence 678899999999998765 5677766664 5667788888888877664
No 188
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=88.70 E-value=6.8 Score=32.63 Aligned_cols=73 Identities=11% Similarity=-0.004 Sum_probs=58.3
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh----cc-----------c-cCCchHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA----TL-----------D-FMPSTFLLMSL 116 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~----t~-----------~-~~pg~~f~~~a 116 (130)
.-++.+.+-+..++.+-|+++-.+-....+...+++.+++|++.+.+-.+ +. + -.+..||...+
T Consensus 117 Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~ 196 (422)
T COG0738 117 GIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILA 196 (422)
T ss_pred hhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHH
Confidence 34677888899999999999999999999999999999999999988662 11 1 15678899888
Q ss_pred HHHHHHHHH
Q psy16105 117 VLTSPALFI 125 (130)
Q Consensus 117 ~l~~~~~~l 125 (130)
...+...++
T Consensus 197 ~~lvll~v~ 205 (422)
T COG0738 197 GLLVLLAVL 205 (422)
T ss_pred HHHHHHHHH
Confidence 887555544
No 189
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=88.63 E-value=3.7 Score=32.98 Aligned_cols=37 Identities=8% Similarity=0.007 Sum_probs=33.0
Q ss_pred hcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 66 SKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 66 Sk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
....|++++|+..|.......++..++|.+...+.+.
T Consensus 359 ~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~ 395 (412)
T TIGR02332 359 DQSISLQARAIAIAVINATGNIGSALSPFLIGILKDA 395 (412)
T ss_pred ccccchHHHHHHHHHHHHhhhhhhhhhhhhccccccc
Confidence 4567899999999999999999999999998888765
No 190
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=88.24 E-value=1.9 Score=35.85 Aligned_cols=87 Identities=14% Similarity=0.163 Sum_probs=65.4
Q ss_pred hhHHHHHhhhhhccccchhHHHHHHHHHHHHH-------------------------------------------HHHHH
Q psy16105 14 EFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF-------------------------------------------LGAVA 50 (130)
Q Consensus 14 ~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~-------------------------------------------~~~~~ 50 (130)
..+-+..|..+.-+-|+++.+++.++.....+ ....+
T Consensus 255 ~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~~l~~i 334 (422)
T COG0738 255 IGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVALYALFLI 334 (422)
T ss_pred HHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH
Confidence 34555666666677788887777766543332 44567
Q ss_pred HHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 51 SLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
+.+.+...|++.++..+..| |+.+.-|..-++..+++-+-|++...+=+.
T Consensus 335 g~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~ 384 (422)
T COG0738 335 GLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADM 384 (422)
T ss_pred HHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHh
Confidence 77889999999999999998 667777777777888888889998888654
No 191
>PRK10429 melibiose:sodium symporter; Provisional
Probab=88.18 E-value=13 Score=30.45 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=31.5
Q ss_pred hhHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHhHhhHHHHHH
Q psy16105 55 NASFIAMRAIISKLT-SAEELGKVMSAFMLFEAIAPMIYNPIYN 97 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v-~~~eqG~~~~~~~~~~sl~~~i~~~l~~ 97 (130)
.+..+..+|+.+.+. +++||.++.+.-....+++.++.+.+..
T Consensus 121 t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~ 164 (473)
T PRK10429 121 TIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTL 164 (473)
T ss_pred HHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556778888888 7999999999877777777666554443
No 192
>KOG2532|consensus
Probab=86.83 E-value=1.8 Score=36.26 Aligned_cols=57 Identities=21% Similarity=0.227 Sum_probs=45.3
Q ss_pred CccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh-ccccCCchHHHHHHHHHHHHHHHHH
Q psy16105 70 SAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA-TLDFMPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 70 ~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~-t~~~~pg~~f~~~a~l~~~~~~l~~ 127 (130)
.|++-|-+.|+.+.+.+++++++|.+.+.+-+. +.+-| ..+|++.+++.+..-+++.
T Consensus 387 apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW-~~VF~i~a~i~~~~~i~f~ 444 (466)
T KOG2532|consen 387 APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEW-RIVFLIAAGILIVGNIIFL 444 (466)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHH-HHHHHHHHHHHHHhchhee
Confidence 688999999999999999999999999988743 33335 4678888888877665554
No 193
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=86.81 E-value=8.5 Score=31.79 Aligned_cols=83 Identities=7% Similarity=-0.006 Sum_probs=62.8
Q ss_pred hccccchhHHHHHHHHHHHHH--------------------------------------------HHHHHHHHHhhHHHH
Q psy16105 25 AFRWNEYNYSTFYTAYYFTDF--------------------------------------------LGAVASLFSNASFIA 60 (130)
Q Consensus 25 ~f~W~~~~~g~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~p~ 60 (130)
.-|||+++.|...+..++..+ -+..++...+...|.
T Consensus 237 ~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~l 316 (395)
T COG2807 237 DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILWALLLGLGQGGAFPL 316 (395)
T ss_pred HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhCccchHHHH
Confidence 458999999998888777665 112333344666666
Q ss_pred HHHHHh-cCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccC
Q psy16105 61 MRAIIS-KLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFM 107 (130)
Q Consensus 61 ~rs~iS-k~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~ 107 (130)
--.++. |..+++|-+++-|..|...-+-.-.+|.++..+++.+=++-
T Consensus 317 aL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~ 364 (395)
T COG2807 317 ALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWS 364 (395)
T ss_pred HHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChH
Confidence 656555 44578889999999999999889999999999999986663
No 194
>PRK09669 putative symporter YagG; Provisional
Probab=86.32 E-value=3.5 Score=33.34 Aligned_cols=53 Identities=15% Similarity=0.105 Sum_probs=42.9
Q ss_pred HHHHHhhHHHHHHHHHhcCCCccc-------hHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 50 ASLFSNASFIAMRAIISKLTSAEE-------LGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 50 ~~~~~~~~~p~~rs~iSk~v~~~e-------qG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
.+...+...|...+++++.+|.|| -|..+|..+..+.++..+++.+...+++.
T Consensus 329 ~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~ 388 (444)
T PRK09669 329 FNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW 388 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444567788999999999997444 46688999999999999999988888765
No 195
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=86.31 E-value=18 Score=30.04 Aligned_cols=82 Identities=20% Similarity=0.111 Sum_probs=63.0
Q ss_pred HHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccC-------CchHHHHHHHHHH
Q psy16105 48 AVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFM-------PSTFLLMSLVLTS 120 (130)
Q Consensus 48 ~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~-------pg~~f~~~a~l~~ 120 (130)
..++..+|+...+.-+.+=.+.++++.|...|+=+..|+++.-++..+...+-+...... -+.+|.+-+.+++
T Consensus 309 ~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~ 388 (403)
T PF03209_consen 309 FLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLL 388 (403)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHH
Confidence 445556677777777788888899999999999999999988888888887766543332 2578888888888
Q ss_pred HHHHHHHhc
Q psy16105 121 PALFIFLCH 129 (130)
Q Consensus 121 ~~~~l~~~~ 129 (130)
.+++++..+
T Consensus 389 ~a~~ll~~l 397 (403)
T PF03209_consen 389 AALVLLGRL 397 (403)
T ss_pred HHHHHHHHh
Confidence 888776543
No 196
>PRK10429 melibiose:sodium symporter; Provisional
Probab=83.94 E-value=6.5 Score=32.25 Aligned_cols=51 Identities=10% Similarity=0.028 Sum_probs=40.1
Q ss_pred HHHhhHHHHHHHHHhcCCCccc--hHH-----HHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 52 LFSNASFIAMRAIISKLTSAEE--LGK-----VMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 52 ~~~~~~~p~~rs~iSk~v~~~e--qG~-----~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
...+...+...++++..+|.+| .|+ .+|..+..+-++.-+++.+...+++.
T Consensus 336 ~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 336 IGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345677788889999988443 555 99999999999999998888887754
No 197
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=81.20 E-value=27 Score=28.96 Aligned_cols=66 Identities=14% Similarity=0.088 Sum_probs=49.7
Q ss_pred HHHHHHHhcCCCccchHHHHHHH-HHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHH
Q psy16105 59 IAMRAIISKLTSAEELGKVMSAF-MLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFL 127 (130)
Q Consensus 59 p~~rs~iSk~v~~~eqG~~~~~~-~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~ 127 (130)
.+.-=.+++..|++-...++.+. +....++..+.+++...+|+. .-..-.|++++++.++..++-.
T Consensus 331 va~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~---~G~~~tylimg~iv~~~~li~~ 397 (412)
T PF01306_consen 331 VAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDR---IGFQHTYLIMGLIVLPFTLISA 397 (412)
T ss_dssp HHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhh---cCcHHHHHHHHHHHHHHHHHhe
Confidence 34445678889999889999885 688889999999999999987 2223478888888777666543
No 198
>KOG1330|consensus
Probab=80.95 E-value=0.63 Score=39.28 Aligned_cols=76 Identities=11% Similarity=0.004 Sum_probs=56.2
Q ss_pred HHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHh
Q psy16105 51 SLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFLC 128 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~~ 128 (130)
+.......|..+++++...|+++||++++.......++..++-++...+=+.+=+ | ...|.+.+.+.+++.++..|
T Consensus 132 GiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~-W-r~af~~~avl~vi~~~L~~~ 207 (493)
T KOG1330|consen 132 GIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW-W-RWAFRGSAVLGVIVGLLVFL 207 (493)
T ss_pred ccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc-e-EEEEEeehHHHHHHHHHHHh
Confidence 4445778999999999999999999999999998888877776666554333221 2 34567777777766666554
No 199
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=80.35 E-value=31 Score=28.31 Aligned_cols=78 Identities=14% Similarity=0.226 Sum_probs=55.2
Q ss_pred HHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh---ccccCCchHHHH--HHHHHHHHHHH
Q psy16105 51 SLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA---TLDFMPSTFLLM--SLVLTSPALFI 125 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~---t~~~~pg~~f~~--~a~l~~~~~~l 125 (130)
...+.+..=..--+++|+.|+..-|.+|+++.+..+++..++..+.+.+.+. |-+.|-+++.++ ..++.++.+.+
T Consensus 329 ~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~l 408 (433)
T PF03092_consen 329 EVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPL 408 (433)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHH
Confidence 3344444334447899999999999999999999999999999998877554 334477766655 44444555554
Q ss_pred HHh
Q psy16105 126 FLC 128 (130)
Q Consensus 126 ~~~ 128 (130)
..+
T Consensus 409 l~l 411 (433)
T PF03092_consen 409 LFL 411 (433)
T ss_pred HHH
Confidence 434
No 200
>KOG0569|consensus
Probab=78.91 E-value=39 Score=28.67 Aligned_cols=64 Identities=8% Similarity=0.018 Sum_probs=51.4
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTS 120 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~ 120 (130)
++-...|.-.-+.+.++|++.|..++++...++-+++++-...|-.+++. +.+..|+.-++...
T Consensus 381 f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~----~g~~~filF~i~~~ 444 (485)
T KOG0569|consen 381 FAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNV----IGPYVFILFVIPLA 444 (485)
T ss_pred hhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcchhhHHHHHHHH
Confidence 34456888899999999999999999999999999999999999888876 34455555444443
No 201
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=75.01 E-value=38 Score=28.25 Aligned_cols=34 Identities=12% Similarity=0.146 Sum_probs=27.3
Q ss_pred HHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHH
Q psy16105 62 RAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPI 95 (130)
Q Consensus 62 rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l 95 (130)
.=++=..||++|||.+.|.-.+++++.-++.-.+
T Consensus 378 ~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 378 TQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 3344457999999999999999999998885443
No 202
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=74.26 E-value=37 Score=28.58 Aligned_cols=70 Identities=14% Similarity=-0.045 Sum_probs=50.8
Q ss_pred HHHHHHHhcCCC--ccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHhc
Q psy16105 59 IAMRAIISKLTS--AEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFIFLCH 129 (130)
Q Consensus 59 p~~rs~iSk~v~--~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l~~~~ 129 (130)
..=.+++|+.++ +++||...|+.++...+..++.+.....+.+. .+.-+-..+.+++...+++.++..|+
T Consensus 399 siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~-~g~~~~~~~~~~gv~~~~aa~~~~~~ 470 (477)
T TIGR01301 399 SIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQL-FGGGNLPAFVVGAVAAFVSGLLALIL 470 (477)
T ss_pred HHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHH-cCCCCeeHHHHHHHHHHHHHHHHHHh
Confidence 334578888888 57889999999999999999999876664333 23334456677777777777766654
No 203
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=74.03 E-value=18 Score=31.44 Aligned_cols=43 Identities=26% Similarity=0.342 Sum_probs=37.5
Q ss_pred HHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhcc
Q psy16105 62 RAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATL 104 (130)
Q Consensus 62 rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~ 104 (130)
..+..-.+|+|+.|...|+..+..++++-++.-+++.+|+...
T Consensus 427 ~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~ 469 (599)
T PF06609_consen 427 IVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKL 469 (599)
T ss_pred HHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhh
Confidence 4455666899999999999999999999999999999998754
No 204
>KOG2816|consensus
Probab=73.54 E-value=10 Score=31.80 Aligned_cols=71 Identities=18% Similarity=0.116 Sum_probs=61.0
Q ss_pred HHHHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHH
Q psy16105 46 LGAVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSL 116 (130)
Q Consensus 46 ~~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a 116 (130)
+...+..+.+...|.+.+.+-+.-..+.+|..+...++.+.+...+.++.+..+|..+++.-|+.......
T Consensus 370 ~is~i~~l~~~~~~~~~~~i~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 440 (463)
T KOG2816|consen 370 IISGIEGLSGVVSPALYGNIFALTLDDLPGFLFVISSLVLPFAFLAAIPLLAILLTKSIPVSPGIFNFISA 440 (463)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHhccCCCCCCccccccc
Confidence 55677778899999999999999999999999999988899999999999999999998777776554433
No 205
>PF13347 MFS_2: MFS/sugar transport protein
Probab=71.81 E-value=18 Score=29.03 Aligned_cols=51 Identities=16% Similarity=0.150 Sum_probs=40.2
Q ss_pred HHHhhHHHHHHHHHhcCCCc-------cchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 52 LFSNASFIAMRAIISKLTSA-------EELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 52 ~~~~~~~p~~rs~iSk~v~~-------~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
...+...+...++++..+|. ++.|..+|..+..+.++.-+++.+...+.+.
T Consensus 327 i~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 327 IGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred hhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 33456667888899988875 4479999999999999999988888776543
No 206
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=71.00 E-value=8.9 Score=32.64 Aligned_cols=113 Identities=16% Similarity=0.208 Sum_probs=69.1
Q ss_pred ccchhHHHHHhhhhhcc----ccchhHHHHH----HHHHHHHH-------------------------------------
Q psy16105 11 YQGEFTVMYLYTRLAFR----WNEYNYSTFY----TAYYFTDF------------------------------------- 45 (130)
Q Consensus 11 ~~g~~~i~~ly~~~~f~----W~~~~~g~~~----~~~~~~~~------------------------------------- 45 (130)
+-|++.++.+|..++++ -|+++..-.. +...+..+
T Consensus 37 yYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~ 116 (498)
T COG3104 37 YYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSG 116 (498)
T ss_pred hhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccccc
Confidence 56889999999999998 9888743332 22222222
Q ss_pred -----HH-HHHHHHHhhHHHHHHHHHhcCCCccc--hHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHH
Q psy16105 46 -----LG-AVASLFSNASFIAMRAIISKLTSAEE--LGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLV 117 (130)
Q Consensus 46 -----~~-~~~~~~~~~~~p~~rs~iSk~v~~~e--qG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~ 117 (130)
.+ ..+.+..|+..|...+++.++.|++| +=+-|+..-...+++.+++|.+...+=.+ ..--.-|-.++.
T Consensus 117 ~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~---~g~~~gF~~aav 193 (498)
T COG3104 117 PGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN---YGWHVGFGLAAV 193 (498)
T ss_pred ccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHh---hCHHHHHHHHHH
Confidence 01 12234568889999999999997655 33445555555667888888877765322 111233444555
Q ss_pred HHHHHHHHH
Q psy16105 118 LTSPALFIF 126 (130)
Q Consensus 118 l~~~~~~l~ 126 (130)
-+...++.+
T Consensus 194 Gm~~gl~~f 202 (498)
T COG3104 194 GMIIGLVIF 202 (498)
T ss_pred HHHHHHHHH
Confidence 455555444
No 207
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=70.24 E-value=64 Score=27.25 Aligned_cols=80 Identities=10% Similarity=0.158 Sum_probs=55.8
Q ss_pred HHHHHhhHHH-HHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh--ccccCCc-------hHHHHHHHHH
Q psy16105 50 ASLFSNASFI-AMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA--TLDFMPS-------TFLLMSLVLT 119 (130)
Q Consensus 50 ~~~~~~~~~p-~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~--t~~~~pg-------~~f~~~a~l~ 119 (130)
...++..... .-.+.++...++||=.|.++..+...+++.+++|.+...+-+. ..+..-+ .-+.+.+++.
T Consensus 138 ~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~ 217 (472)
T TIGR00769 138 AELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSG 217 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHH
Confidence 3445666665 7889999999999999999999999999999999888776532 1111111 1224444455
Q ss_pred HHHHHHHHhc
Q psy16105 120 SPALFIFLCH 129 (130)
Q Consensus 120 ~~~~~l~~~~ 129 (130)
.+++.+..|+
T Consensus 218 ~~~~~~~~~l 227 (472)
T TIGR00769 218 LAIILLYWWV 227 (472)
T ss_pred HHHHHHHHHH
Confidence 6666666665
No 208
>PF13347 MFS_2: MFS/sugar transport protein
Probab=69.78 E-value=56 Score=26.17 Aligned_cols=49 Identities=20% Similarity=0.227 Sum_probs=38.1
Q ss_pred HhhHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 54 SNASFIAMRAIISKLTS-AEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 54 ~~~~~p~~rs~iSk~v~-~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
.....-..+|+.+...+ +|||.++.+.-.....++.++.+.+...+.+.
T Consensus 117 ~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~ 166 (428)
T PF13347_consen 117 YTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSW 166 (428)
T ss_pred hhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 34556666788888886 68999999999999999888777777776643
No 209
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=69.27 E-value=26 Score=24.73 Aligned_cols=52 Identities=15% Similarity=0.093 Sum_probs=42.2
Q ss_pred HHHHhhHHHHHHHHHhcCCCc-cchHHHHHHHHH-HHHHhHhhHHHHHHHHHHh
Q psy16105 51 SLFSNASFIAMRAIISKLTSA-EELGKVMSAFML-FEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 51 ~~~~~~~~p~~rs~iSk~v~~-~eqG~~~~~~~~-~~sl~~~i~~~l~~~iy~~ 102 (130)
+...+...|...+.+++..|+ +++++..+.... ...++.+++|.+...+...
T Consensus 105 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 105 GLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445567889999999999988 789999999998 5778888888776666655
No 210
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=68.24 E-value=44 Score=27.70 Aligned_cols=53 Identities=13% Similarity=0.096 Sum_probs=44.5
Q ss_pred HHHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHH
Q psy16105 47 GAVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAV 99 (130)
Q Consensus 47 ~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~i 99 (130)
....+.++|....-.-..+++.+|+|||.-..|+.+.-++++-++++.+.-.+
T Consensus 342 if~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 342 IFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 33456677887777788889999999999999999999999999998877654
No 211
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=66.58 E-value=25 Score=27.83 Aligned_cols=76 Identities=8% Similarity=-0.014 Sum_probs=55.4
Q ss_pred HHHHHHhhHHHHHHHHHhcCCCcc---chHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Q psy16105 49 VASLFSNASFIAMRAIISKLTSAE---ELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLTSPALFI 125 (130)
Q Consensus 49 ~~~~~~~~~~p~~rs~iSk~v~~~---eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~~~~~~l 125 (130)
.+....|...|.+.++..++.+++ ++-+.|...-..-+++.++++.+...+=+. .--...|.+.++..+++++.
T Consensus 42 lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~---~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 42 LIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQN---YGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC---S-HHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccc---cchhhhhhHHHHHHHHHHHH
Confidence 345667899999999999999876 456677777888888888887766665422 22245677878777777776
Q ss_pred HH
Q psy16105 126 FL 127 (130)
Q Consensus 126 ~~ 127 (130)
+.
T Consensus 119 f~ 120 (372)
T PF00854_consen 119 FL 120 (372)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 212
>PRK09848 glucuronide transporter; Provisional
Probab=65.37 E-value=71 Score=25.71 Aligned_cols=29 Identities=10% Similarity=-0.091 Sum_probs=21.7
Q ss_pred HHHHhhhhhccccchhHHHHHHHHHHHHH
Q psy16105 17 VMYLYTRLAFRWNEYNYSTFYTAYYFTDF 45 (130)
Q Consensus 17 i~~ly~~~~f~W~~~~~g~~~~~~~~~~~ 45 (130)
.+..|..+.++.++.+.|...+...+.+.
T Consensus 30 ~l~~y~~~~~gl~~~~~g~~~~~~~~~~~ 58 (448)
T PRK09848 30 FLLSYYTDVAGVGAAAAGTMLLLVRVFDA 58 (448)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 34456777889999999998877766555
No 213
>KOG2325|consensus
Probab=63.07 E-value=93 Score=26.54 Aligned_cols=75 Identities=16% Similarity=0.133 Sum_probs=52.9
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHH---HHhccccCC-------chHHHHHHHHHHHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAV---YTATLDFMP-------STFLLMSLVLTSPA 122 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~i---y~~t~~~~p-------g~~f~~~a~l~~~~ 122 (130)
++......+|+.++..--++||-|+++..+.-..++.++||.+-... =.......| .+|=++++.+.+..
T Consensus 142 vg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~ 221 (488)
T KOG2325|consen 142 VGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIY 221 (488)
T ss_pred cCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHH
Confidence 34455788999999999999999999999988887777777654432 222223344 46778888887766
Q ss_pred HHHHH
Q psy16105 123 LFIFL 127 (130)
Q Consensus 123 ~~l~~ 127 (130)
++++.
T Consensus 222 ~v~i~ 226 (488)
T KOG2325|consen 222 IVIIL 226 (488)
T ss_pred HHHHH
Confidence 66543
No 214
>PRK11462 putative transporter; Provisional
Probab=61.80 E-value=89 Score=25.64 Aligned_cols=46 Identities=11% Similarity=0.035 Sum_probs=32.5
Q ss_pred hhHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHhHhhHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLT-SAEELGKVMSAFMLFEAIAPMIYNPIYNAVY 100 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v-~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy 100 (130)
.+..-...|+.+.+. |+|||.++.+.-+...+++..+++.+...+.
T Consensus 124 t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv 170 (460)
T PRK11462 124 TVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLV 170 (460)
T ss_pred HHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444556666665 4899999999999888887777766655443
No 215
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=58.40 E-value=96 Score=24.96 Aligned_cols=51 Identities=18% Similarity=0.111 Sum_probs=36.5
Q ss_pred HHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 50 ASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 50 ~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
++.+.+...|++.++..|..+++..-..-+.... .++..+.|++...+.+.
T Consensus 331 ~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 331 CSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHH
Confidence 3444556669999999999987654333333333 38999999999999874
No 216
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=56.08 E-value=70 Score=22.73 Aligned_cols=57 Identities=11% Similarity=0.142 Sum_probs=45.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 46 LGAVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 46 ~~~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
.+.+.+...++.-.+.-..+++..++++++|-.+..-.+...+.++|....-.++..
T Consensus 95 ~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~~ 151 (156)
T PF05978_consen 95 ASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQG 151 (156)
T ss_pred HHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 444566667777888888999999999999999999999988888887776666544
No 217
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=53.14 E-value=18 Score=30.00 Aligned_cols=34 Identities=3% Similarity=-0.046 Sum_probs=23.9
Q ss_pred cchhHHHHHhhhhhccccchhHHHHHHHHHHHHH
Q psy16105 12 QGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF 45 (130)
Q Consensus 12 ~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~ 45 (130)
+...+-+.+|.++.-|-+++|.|..++...+..+
T Consensus 24 gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l 57 (412)
T PF01306_consen 24 GIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFAL 57 (412)
T ss_dssp HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHH
Confidence 3445667778888899999999999998876665
No 218
>PTZ00207 hypothetical protein; Provisional
Probab=43.85 E-value=2.2e+02 Score=24.81 Aligned_cols=80 Identities=14% Similarity=0.122 Sum_probs=59.7
Q ss_pred HHHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhH-HHHHHHHHHhccc-----c-----CCchHHHHHH
Q psy16105 48 AVASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIY-NPIYNAVYTATLD-----F-----MPSTFLLMSL 116 (130)
Q Consensus 48 ~~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~-~~l~~~iy~~t~~-----~-----~pg~~f~~~a 116 (130)
.+++...|..-+..-+++|.+-. ++-|+.+-....-.-++.++- ..++..+|+.-.+ . .-..+|++.+
T Consensus 460 ~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~ 538 (591)
T PTZ00207 460 FIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLL 538 (591)
T ss_pred HHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHH
Confidence 34555678888888888999999 999999999988666666665 4466778876431 1 2338999999
Q ss_pred HHHHHHHHHHHh
Q psy16105 117 VLTSPALFIFLC 128 (130)
Q Consensus 117 ~l~~~~~~l~~~ 128 (130)
++...+.++-.+
T Consensus 539 ~~~~~g~~~s~~ 550 (591)
T PTZ00207 539 GLSFLAFITSTY 550 (591)
T ss_pred HHHHHHHHHHhh
Confidence 998888776554
No 219
>PF12280 BSMAP: Brain specific membrane anchored protein; InterPro: IPR022065 This family of proteins is found in eukaryotes. Proteins in this family are typically between 285 and 331 amino acids in length. BSMAP has a putative transmembrane domain and is predicted to be a type I membrane glycoprotein.
Probab=41.39 E-value=27 Score=26.34 Aligned_cols=25 Identities=4% Similarity=-0.122 Sum_probs=22.6
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHhc
Q psy16105 105 DFMPSTFLLMSLVLTSPALFIFLCH 129 (130)
Q Consensus 105 ~~~pg~~f~~~a~l~~~~~~l~~~~ 129 (130)
+..+|+|-++.+..+++.+++++|+
T Consensus 183 SrrsGLP~WILa~~LfLSVlvmLWL 207 (207)
T PF12280_consen 183 SRRSGLPRWILATTLFLSVLVMLWL 207 (207)
T ss_pred ccccCCchHHHHHHHHHHHHHHHhC
Confidence 3589999999999999999999996
No 220
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=38.94 E-value=2.1e+02 Score=23.24 Aligned_cols=78 Identities=12% Similarity=0.117 Sum_probs=48.8
Q ss_pred hHHHHHhhhhhccccchhHHHHHHHHHHHHH---------------------------------------------HHHH
Q psy16105 15 FTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF---------------------------------------------LGAV 49 (130)
Q Consensus 15 ~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~---------------------------------------------~~~~ 49 (130)
...+.+|.++ -+.|+.|+|...+...+..+ +...
T Consensus 22 ~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l 100 (400)
T PF03825_consen 22 LPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLL 100 (400)
T ss_pred HHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3445667776 45999999999998877665 1111
Q ss_pred HHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHH
Q psy16105 50 ASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPI 95 (130)
Q Consensus 50 ~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l 95 (130)
...+.....|-..|+.-+.++ |+++=+|-.-.-.+++=+++...
T Consensus 101 ~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~ 144 (400)
T PF03825_consen 101 FSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALA 144 (400)
T ss_pred HHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHH
Confidence 222334567777888888776 34455555555555565555544
No 221
>PRK11462 putative transporter; Provisional
Probab=36.95 E-value=2.3e+02 Score=23.15 Aligned_cols=50 Identities=4% Similarity=-0.010 Sum_probs=36.8
Q ss_pred HHhhHHHHHHHHHhcCCC-------ccchHHHHHHHHHHHHHhHhhHHHHHHHHHHh
Q psy16105 53 FSNASFIAMRAIISKLTS-------AEELGKVMSAFMLFEAIAPMIYNPIYNAVYTA 102 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~-------~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~ 102 (130)
..+...+...+++...+| .++.|..++..+..+-++.-+++.+...++..
T Consensus 331 ~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 331 LHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred HHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556777888888887 44567778888888888888888777777654
No 222
>KOG0255|consensus
Probab=36.72 E-value=2.4e+02 Score=23.19 Aligned_cols=49 Identities=8% Similarity=0.137 Sum_probs=41.0
Q ss_pred HHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHH
Q psy16105 52 LFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYT 101 (130)
Q Consensus 52 ~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~ 101 (130)
.+.+........+++..+++++||...+. ...--.++.+.++..+.+.+
T Consensus 183 ~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 183 FFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred hhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 33455666777888999999999999999 88888889999999998877
No 223
>PF12832 MFS_1_like: MFS_1 like family
Probab=35.79 E-value=23 Score=22.00 Aligned_cols=38 Identities=8% Similarity=0.092 Sum_probs=26.7
Q ss_pred EcccccchhHHHHHhhhhhccccchhHHHHHHHHHHHHH
Q psy16105 7 LNGPYQGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF 45 (130)
Q Consensus 7 ~~~~~~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~ 45 (130)
.+++.+....-+..|.|+ .|-|+.|+|...++.-++.+
T Consensus 12 ~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~ 49 (77)
T PF12832_consen 12 YFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRF 49 (77)
T ss_pred HHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHH
Confidence 334444445556667774 89999999999988776655
No 224
>KOG1278|consensus
Probab=35.64 E-value=2.3e+02 Score=24.97 Aligned_cols=54 Identities=17% Similarity=0.252 Sum_probs=42.9
Q ss_pred HhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhcc------------ccCCchHHHHHHHH
Q psy16105 65 ISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATL------------DFMPSTFLLMSLVL 118 (130)
Q Consensus 65 iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~------------~~~pg~~f~~~a~l 118 (130)
+.-..+|+.||.+.++.-.+-.+.+++++-+...+|+..- ..+||..|...-.+
T Consensus 352 ~lGflSPs~RGsLmT~~~~l~v~~G~~agY~s~rlyk~~~g~~wk~~~~lta~l~PGivf~~~f~l 417 (628)
T KOG1278|consen 352 CLGFLSPSSRGSLMTAMVLLFVFMGFVAGYVSARLYKTFKGREWKRNAILTAFLFPGIVFAIFFVL 417 (628)
T ss_pred HhccCCccccccHHHHHHHHHHHHHHhhhhhhhhhHhhhcCCcchhhHHhhhhhcchHHHHHHHHH
Confidence 3456778999999999999999999999999999998532 23888777654443
No 225
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]
Probab=33.08 E-value=1.5e+02 Score=23.33 Aligned_cols=55 Identities=15% Similarity=0.408 Sum_probs=30.4
Q ss_pred ccchHHHHHHHHHHHHHhHhhHHH-HHHHHHHhccccCC-----chHHHHHHHHHHHHHHHHHh
Q psy16105 71 AEELGKVMSAFMLFEAIAPMIYNP-IYNAVYTATLDFMP-----STFLLMSLVLTSPALFIFLC 128 (130)
Q Consensus 71 ~~eqG~~~~~~~~~~sl~~~i~~~-l~~~iy~~t~~~~p-----g~~f~~~a~l~~~~~~l~~~ 128 (130)
.++|.+..-.+++ ++.++.|| +-+.+|.--.+..| -...++.+.+.++++++++|
T Consensus 255 s~~~N~imk~LTi---~s~iflPpTlIagiyGMNf~~mPel~~~~Gy~~~l~~m~~~~~~~~~~ 315 (322)
T COG0598 255 NNNQNEIMKILTI---VSTIFLPPTLITGFYGMNFKGMPELDWPYGYPIALILMLLLALLLYLY 315 (322)
T ss_pred HHHHHHHHHHHHH---HHHHHHhhHHHHcccccCCCCCcCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 4556655555444 44455555 66778887655434 23344445555566666555
No 226
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=32.75 E-value=2.2e+02 Score=24.15 Aligned_cols=92 Identities=12% Similarity=0.016 Sum_probs=61.8
Q ss_pred cccchhHHHHHhhhhhccccchhHHHHHHHHHHHHH--------------------------------------------
Q psy16105 10 PYQGEFTVMYLYTRLAFRWNEYNYSTFYTAYYFTDF-------------------------------------------- 45 (130)
Q Consensus 10 ~~~g~~~i~~ly~~~~f~W~~~~~g~~~~~~~~~~~-------------------------------------------- 45 (130)
+.+-..++..+|.++-.++++.+.++.+.......+
T Consensus 251 ~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~ 330 (467)
T COG2211 251 AFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLI 330 (467)
T ss_pred HHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHH
Confidence 334446677778888888888877666544432221
Q ss_pred --HHHHHHHHHhhHHHHHHHHHhcCCCc-------cchHHHHHHHHHHHHHhHhhHHHHHHHHHH
Q psy16105 46 --LGAVASLFSNASFIAMRAIISKLTSA-------EELGKVMSAFMLFEAIAPMIYNPIYNAVYT 101 (130)
Q Consensus 46 --~~~~~~~~~~~~~p~~rs~iSk~v~~-------~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~ 101 (130)
...+.....+...|-.+++++..+|- +..|-.+|...-..-++.-++..+-..+..
T Consensus 331 ~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 331 VVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred HHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11233445678889999999999874 557889999888877777776665555543
No 227
>COG2059 ChrA Chromate transport protein ChrA [Inorganic ion transport and metabolism]
Probab=31.49 E-value=2.2e+02 Score=21.18 Aligned_cols=89 Identities=17% Similarity=0.184 Sum_probs=49.9
Q ss_pred cccchhHHHHHhhh---hhccc-cchhHHHHHHHHHHHHH-----------------HHHHHHHHHhhHHHHH-----HH
Q psy16105 10 PYQGEFTVMYLYTR---LAFRW-NEYNYSTFYTAYYFTDF-----------------LGAVASLFSNASFIAM-----RA 63 (130)
Q Consensus 10 ~~~g~~~i~~ly~~---~~f~W-~~~~~g~~~~~~~~~~~-----------------~~~~~~~~~~~~~p~~-----rs 63 (130)
.|.|-.....++-+ +|.+| |++|+....++.+.+.- .+..+. .-+.+-|++ =+
T Consensus 21 ~fGGg~a~i~~~~~e~V~~r~Wis~~ef~~~laisq~lPGP~a~~la~~vGy~~~G~~Ga~ia-~lafvLPs~i~~~~l~ 99 (195)
T COG2059 21 GFGGGAAHIPLMRREVVERRKWISEEEFADALAISQLLPGPIATQLAIYVGYKLAGILGALIA-GLAFVLPSILIMLGLA 99 (195)
T ss_pred hcCcHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhchhHHHHH-HHHHHHHHHHHHHHHH
Confidence 46676677777753 36788 88999999988865432 111111 122333332 23
Q ss_pred HHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhcc
Q psy16105 64 IISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATL 104 (130)
Q Consensus 64 ~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~ 104 (130)
.+-+..++.. .+. +..+++-+.+...+....|+...
T Consensus 100 ~~~~~~~~~~--~v~---~~~~glk~~ii~lv~~~~~~l~~ 135 (195)
T COG2059 100 LLLKRFGDLP--LVK---GILKGLKPAIIALVLQAVWRLGK 135 (195)
T ss_pred HHHHHcCcch--HHH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555442 222 34455566667777777777543
No 228
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=29.46 E-value=3.5e+02 Score=22.93 Aligned_cols=52 Identities=12% Similarity=0.138 Sum_probs=31.0
Q ss_pred HHhcCCCccchHHHHHHHHHHHHH-hHhhHHHHHHHHHHhccc--cCCchHHHHHHHHH
Q psy16105 64 IISKLTSAEELGKVMSAFMLFEAI-APMIYNPIYNAVYTATLD--FMPSTFLLMSLVLT 119 (130)
Q Consensus 64 ~iSk~v~~~eqG~~~~~~~~~~sl-~~~i~~~l~~~iy~~t~~--~~pg~~f~~~a~l~ 119 (130)
..-..+|++--|..-|..+...-+ +...+.. .-...+| .|.|....+.++..
T Consensus 370 ~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~----~~g~i~d~~gW~g~Fi~~~~~a~ 424 (448)
T COG2271 370 AAAEFVPKKAAGTATGFVGLFAYLIGAALAGL----PLGYIADTWGWDGGFIVLSIAAL 424 (448)
T ss_pred HHhccccHhhccchhchhhhHHHHhhHHhcCC----cceeeEecCCCcchHHHHHHHHH
Confidence 345668888888888888877665 4444433 3333333 37776555544444
No 229
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=28.85 E-value=3.6e+02 Score=22.87 Aligned_cols=65 Identities=11% Similarity=0.048 Sum_probs=39.8
Q ss_pred hhHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHH
Q psy16105 55 NASFIAMRAIISKLT-SAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLT 119 (130)
Q Consensus 55 ~~~~p~~rs~iSk~v-~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~ 119 (130)
.+..-...|+.+.+. +++||-++.+.=+...+++.++...+...+-+.--+.-.+..|...++++
T Consensus 127 T~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~ 192 (467)
T COG2211 127 TLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVL 192 (467)
T ss_pred HheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHH
Confidence 333444455566655 68999999999999888887777666665544411111133455555554
No 230
>PRK03612 spermidine synthase; Provisional
Probab=28.45 E-value=3.7e+02 Score=22.84 Aligned_cols=51 Identities=8% Similarity=0.237 Sum_probs=31.4
Q ss_pred HHHHHHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHHHHHHHHH
Q psy16105 49 VASLFSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVY 100 (130)
Q Consensus 49 ~~~~~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy 100 (130)
+.+.+.|...|.+--+..+.- .++-|+..|-+...+.++.++|+.++..+.
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 445566777888766665532 234555566666666667777777666553
No 231
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=26.47 E-value=1.3e+02 Score=21.64 Aligned_cols=41 Identities=15% Similarity=0.003 Sum_probs=31.6
Q ss_pred HHhhHHHHHHHHHhcCCCccchHHHHHHHHHHHHHhHhhHH
Q psy16105 53 FSNASFIAMRAIISKLTSAEELGKVMSAFMLFEAIAPMIYN 93 (130)
Q Consensus 53 ~~~~~~p~~rs~iSk~v~~~eqG~~~~~~~~~~sl~~~i~~ 93 (130)
|+....=.-++++|..-|+++-|.++|.-..-.++.++...
T Consensus 107 Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~a 147 (153)
T PF11947_consen 107 FGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMWEA 147 (153)
T ss_pred HHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHHH
Confidence 33333334578999999999999999999998888777543
No 232
>PRK11085 magnesium/nickel/cobalt transporter CorA; Provisional
Probab=25.84 E-value=3.4e+02 Score=21.62 Aligned_cols=20 Identities=25% Similarity=0.685 Sum_probs=10.8
Q ss_pred hhHHH-HHHHHHHhccccCCc
Q psy16105 90 MIYNP-IYNAVYTATLDFMPS 109 (130)
Q Consensus 90 ~i~~~-l~~~iy~~t~~~~pg 109 (130)
++.|| +.+.+|....+..|+
T Consensus 265 if~pptliagiyGMNf~~mP~ 285 (316)
T PRK11085 265 VFLPPTLVASSYGMNFEFMPE 285 (316)
T ss_pred HHHHHHHHHhhcccccCCCCC
Confidence 34444 555677765554555
No 233
>KOG2504|consensus
Probab=24.68 E-value=4.3e+02 Score=22.38 Aligned_cols=50 Identities=4% Similarity=0.041 Sum_probs=39.3
Q ss_pred CCCccchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHHHHHHHHH
Q psy16105 68 LTSAEELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFLLMSLVLT 119 (130)
Q Consensus 68 ~v~~~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f~~~a~l~ 119 (130)
..-+++|+.+-|+..+-..++.++-|++-+.+.+. -.|.+......+..+
T Consensus 162 ~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~--~G~r~~~l~~~~~~l 211 (509)
T KOG2504|consen 162 TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSK--YGWRGALLIFGGISL 211 (509)
T ss_pred hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHH--hCcHHHHHHHHHHHH
Confidence 56689999999999999999999999999999876 225555555555443
No 234
>PRK09546 zntB zinc transporter; Reviewed
Probab=22.59 E-value=1.7e+02 Score=22.91 Aligned_cols=51 Identities=14% Similarity=0.185 Sum_probs=27.0
Q ss_pred cchHHHHHHHHHHHHHhHhhHHH-HHHHHHHhccccCCc-----hHHHHHHHHHHHHHHHHHh
Q psy16105 72 EELGKVMSAFMLFEAIAPMIYNP-IYNAVYTATLDFMPS-----TFLLMSLVLTSPALFIFLC 128 (130)
Q Consensus 72 ~eqG~~~~~~~~~~sl~~~i~~~-l~~~iy~~t~~~~pg-----~~f~~~a~l~~~~~~l~~~ 128 (130)
+|.-|.++++++ +.-|| +.+.+|..-.+..|+ ..+++.+.+.++++++++|
T Consensus 261 N~~m~~Ltilt~------IflPlT~IaGiyGMNf~~mPel~~~~gy~~~l~im~~i~~~~~~~ 317 (324)
T PRK09546 261 NRRTYTMSLMAM------VFLPTTFLTGLFGVNLGGIPGGGWPFGFSIFCLLLVVLIGGVAWW 317 (324)
T ss_pred HHHHHHHHHHHH------HHHHHHHHHhhhccccCCCCCcCCcchHHHHHHHHHHHHHHHHHH
Confidence 444446655554 33454 666678765544444 3444445555555555544
No 235
>COG3242 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.77 E-value=2e+02 Score=17.49 Aligned_cols=57 Identities=18% Similarity=0.301 Sum_probs=34.1
Q ss_pred cchHHHHHHHHHHHHHhHhhHHHHHHHHHHhccccCCchHH-HHHHHHHHHHHHHHHhc
Q psy16105 72 EELGKVMSAFMLFEAIAPMIYNPIYNAVYTATLDFMPSTFL-LMSLVLTSPALFIFLCH 129 (130)
Q Consensus 72 ~eqG~~~~~~~~~~sl~~~i~~~l~~~iy~~t~~~~pg~~f-~~~a~l~~~~~~l~~~~ 129 (130)
|+..-..+..-.+|.+.++.+|-..-...+.-.+ -|.--. .++.+......++++|+
T Consensus 3 ~~~~~Al~LVlVlEGL~p~l~P~~wkk~~~~l~~-lpd~~LR~~G~~~~~~G~~i~~~l 60 (62)
T COG3242 3 DTLWLALGLVLVLEGLGPFLAPRAWKKMATALLE-LPDNQLRRFGGGLVVAGVVILYLL 60 (62)
T ss_pred hHHHHHHHHHHHHhccccccChHHHHHHHHHHHH-CCHHHHHHHhhhHHHhhhHhhhhh
Confidence 3445677888899999999988877666554222 233222 23334445555555554
Done!