RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy16105
         (130 letters)



>d1b65a_ d.154.1.1 (A:) L-aminopeptidase D-Ala-esterase/amidase DmpA
           {Ochrobactrum anthropi [TaxId: 529]}
          Length = 367

 Score = 24.5 bits (53), Expect = 4.9
 Identities = 9/52 (17%), Positives = 20/52 (38%), Gaps = 3/52 (5%)

Query: 53  FSNASFIAMRAIISKLTSAEELG-KVMSAFMLFEAIAPMIYNPIYNAVYTAT 103
           FS A+   M+   +     E +  + +    ++ A    +   + NA+  A 
Sbjct: 287 FSTANQRPMQHRSAPFLDVEMVNDEPLDT--VYLAAVDSVEEAVVNAMIAAE 336


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.331    0.139    0.414 

Gapped
Lambda     K      H
   0.267   0.0565    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 470,668
Number of extensions: 18782
Number of successful extensions: 80
Number of sequences better than 10.0: 1
Number of HSP's gapped: 80
Number of HSP's successfully gapped: 8
Length of query: 130
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 54
Effective length of database: 1,364,116
Effective search space: 73662264
Effective search space used: 73662264
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 48 (22.6 bits)