Query psy16108
Match_columns 94
No_of_seqs 102 out of 706
Neff 5.7
Searched_HMMs 46136
Date Fri Aug 16 21:04:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16108.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16108hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3479|consensus 99.9 4.2E-25 9.1E-30 142.2 9.8 73 15-87 2-74 (83)
2 PF02953 zf-Tim10_DDP: Tim10/D 99.9 1.2E-23 2.7E-28 129.2 8.7 60 17-76 6-65 (66)
3 KOG1733|consensus 99.9 1.1E-21 2.3E-26 128.8 9.8 80 3-85 11-93 (97)
4 KOG3489|consensus 99.9 3.9E-21 8.6E-26 124.3 9.8 61 18-79 21-81 (86)
5 KOG3480|consensus 99.8 9.7E-21 2.1E-25 123.0 7.9 78 4-84 7-85 (90)
6 KOG3377|consensus 92.5 0.73 1.6E-05 32.6 6.5 56 21-76 78-137 (143)
7 PF05811 DUF842: Eukaryotic pr 90.9 3.8 8.3E-05 28.1 9.4 56 21-76 70-129 (131)
8 KOG3377|consensus 76.0 21 0.00045 25.4 6.9 43 34-78 40-82 (143)
9 PF08095 Toxin_25: Hefutoxin f 61.1 1.7 3.6E-05 21.5 -0.8 19 35-59 4-22 (22)
10 PF05811 DUF842: Eukaryotic pr 51.1 76 0.0017 21.6 8.6 43 33-77 31-73 (131)
11 PRK10363 cpxP periplasmic repr 34.3 70 0.0015 23.2 3.7 21 4-24 123-143 (166)
12 smart00157 PRP Major prion pro 33.8 1E+02 0.0022 23.1 4.6 56 27-91 148-206 (217)
13 cd05029 S-100A6 S-100A6: S-100 33.7 65 0.0014 20.2 3.2 37 1-37 44-86 (88)
14 PF13801 Metal_resist: Heavy-m 33.0 1.2E+02 0.0026 18.6 5.1 20 4-23 41-60 (125)
15 smart00856 PMEI Plant invertas 32.3 1.4E+02 0.0031 19.3 5.0 32 48-79 65-96 (148)
16 KOG2688|consensus 30.7 3E+02 0.0066 22.5 7.9 51 24-75 131-181 (394)
17 PF05892 Tricho_coat: Trichovi 29.5 87 0.0019 23.3 3.6 52 18-69 120-177 (194)
18 PF15047 DUF4533: Protein of u 29.3 2.6E+02 0.0056 21.3 6.5 56 20-77 15-70 (225)
19 PRK11546 zraP zinc resistance 29.2 1.8E+02 0.0039 20.5 5.0 13 4-16 43-55 (143)
20 PLN02933 Probable pectinestera 27.9 3.7E+02 0.0081 22.8 7.5 35 45-79 81-115 (530)
21 TIGR01614 PME_inhib pectineste 26.2 2.1E+02 0.0046 19.3 5.3 31 49-79 91-121 (178)
22 KOG3196|consensus 26.0 43 0.00093 25.3 1.5 32 30-61 131-166 (233)
23 PF09889 DUF2116: Uncharacteri 25.5 1.1E+02 0.0024 18.4 3.0 27 45-71 10-36 (59)
24 PRK12750 cpxP periplasmic repr 25.5 1.1E+02 0.0025 21.7 3.6 17 24-40 145-161 (170)
25 PF06384 ICAT: Beta-catenin-in 24.2 1E+02 0.0023 19.6 2.8 23 1-23 29-51 (78)
26 PF06644 ATP11: ATP11 protein; 23.8 1.6E+02 0.0035 22.6 4.3 19 46-64 213-231 (266)
27 PF11239 DUF3040: Protein of u 23.8 97 0.0021 19.2 2.6 19 5-23 3-21 (82)
28 PRK13760 putative RNA-associat 23.8 2.4E+02 0.0051 21.4 5.1 20 4-23 86-105 (231)
29 COG1500 Predicted exosome subu 23.5 1.3E+02 0.0029 22.9 3.7 18 4-21 86-103 (234)
30 smart00777 Mad3_BUB1_I Mad3/BU 23.3 1.1E+02 0.0023 20.9 2.9 26 41-66 34-59 (125)
31 PF03617 IBV_3A: IBV 3A protei 23.2 89 0.0019 18.7 2.2 15 27-41 15-29 (57)
32 KOG0869|consensus 23.1 1.1E+02 0.0023 22.3 3.0 23 44-66 48-70 (168)
33 PRK12751 cpxP periplasmic stre 22.2 1.3E+02 0.0029 21.4 3.4 22 4-25 129-150 (162)
34 PF14920 MTBP_C: MDM2-binding 21.8 2.1E+02 0.0046 22.1 4.5 40 52-91 207-246 (251)
35 PF06075 DUF936: Plant protein 21.2 3.8E+02 0.0082 23.0 6.3 47 34-82 354-401 (579)
No 1
>KOG3479|consensus
Probab=99.93 E-value=4.2e-25 Score=142.17 Aligned_cols=73 Identities=47% Similarity=0.889 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 15 KTQINTFKEFLLQYNKITEICFKDCVNHFISREITKKEESCAVNCLEKYMKMTSRISMRMQEFQMLQNEQMLA 87 (94)
Q Consensus 15 ~~q~~q~~~f~~~~~~lt~~Cf~kCV~~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~~~~e~~~~ 87 (94)
..++++++||+.+||+||++||.+||++|.+++|+++|++|+.+|++||+..+++|++||++++...++.+.+
T Consensus 2 ~~~~k~lkDFl~~YN~ltE~CF~dCV~dft~r~l~~~Ee~C~~~C~~Kflk~nqRv~qrf~e~~~~~~~~a~~ 74 (83)
T KOG3479|consen 2 VQQIKQLKDFLTLYNKLTELCFSDCVDDFTTRDLSGKEETCVMRCAEKFLKMNQRVSQRFQELQAALNQAAAA 74 (83)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3588999999999999999999999999999999999999999999999999999999999999888765443
No 2
>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.
Probab=99.90 E-value=1.2e-23 Score=129.18 Aligned_cols=60 Identities=42% Similarity=0.778 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 17 QINTFKEFLLQYNKITEICFKDCVNHFISREITKKEESCAVNCLEKYMKMTSRISMRMQE 76 (94)
Q Consensus 17 q~~q~~~f~~~~~~lt~~Cf~kCV~~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e 76 (94)
+..++++|+.+|+++++.||+|||++||+++||++|.+||+||++||++++.+|+++|++
T Consensus 6 ~~~q~~~~~~~~~~~t~~Cf~kCv~~~~~~~L~~~E~~Ci~~C~~ky~~~~~~v~~~~~~ 65 (66)
T PF02953_consen 6 QEQQMKDFQELFNKLTERCFDKCVTKFPSSSLSSKEESCIDNCVDKYIDTNQFVSKRFQQ 65 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHS-TTSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 556778888899999999999999999999999999999999999999999999999985
No 3
>KOG1733|consensus
Probab=99.87 E-value=1.1e-21 Score=128.76 Aligned_cols=80 Identities=25% Similarity=0.424 Sum_probs=66.2
Q ss_pred CCCCHHHHH-HHHH--HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 3 DQLNEAQQN-EMMK--TQINTFKEFLLQYNKITEICFKDCVNHFISREITKKEESCAVNCLEKYMKMTSRISMRMQEFQM 79 (94)
Q Consensus 3 ~~l~~~~q~-~~~~--~q~~q~~~f~~~~~~lt~~Cf~kCV~~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~ 79 (94)
...++++.. +++. .+...+...+.++++|++.||+|||++ |+++|++.|.+||++|++||||+|+.|++.|. .+
T Consensus 11 ~~~s~~~~~~~~m~qVkqqlAvAnAqeLv~kisekCf~KCit~-PGssl~~~e~~Cis~CmdRyMdawniVSrty~--sR 87 (97)
T KOG1733|consen 11 GAGSSKTTEGELMNQVKQQLAVANAQELVSKISEKCFDKCITK-PGSSLDSSEKSCISRCMDRYMDAWNIVSRTYI--SR 87 (97)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcccCcchHHHHHHHHHHHHHHHHHHHHHHH--HH
Confidence 344444444 5554 344456667779999999999999998 99999999999999999999999999999998 88
Q ss_pred HHHHHH
Q psy16108 80 LQNEQM 85 (94)
Q Consensus 80 ~~~e~~ 85 (94)
+|+|.+
T Consensus 88 lQre~a 93 (97)
T KOG1733|consen 88 LQREQA 93 (97)
T ss_pred HHHHHH
Confidence 888865
No 4
>KOG3489|consensus
Probab=99.86 E-value=3.9e-21 Score=124.28 Aligned_cols=61 Identities=23% Similarity=0.566 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 18 INTFKEFLLQYNKITEICFKDCVNHFISREITKKEESCAVNCLEKYMKMTSRISMRMQEFQM 79 (94)
Q Consensus 18 ~~q~~~f~~~~~~lt~~Cf~kCV~~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~ 79 (94)
..+.+.|+.++|.+|++||+|||.+ |+++||++|++|+.|||+||||++.+|.+||+.+.+
T Consensus 21 E~qk~k~~~~VHqft~~CWdKCi~~-~~sklds~~e~ClsnCV~RfiDts~~I~~r~~~~~~ 81 (86)
T KOG3489|consen 21 ETQKQKFQEQVHQFTEICWDKCIEK-PGSKLDSSEETCLSNCVNRFIDTSLFIVKRLAQMNQ 81 (86)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC-CcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3455666669999999999999998 559999999999999999999999999999996554
No 5
>KOG3480|consensus
Probab=99.84 E-value=9.7e-21 Score=123.03 Aligned_cols=78 Identities=22% Similarity=0.557 Sum_probs=70.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 4 QLNEAQQNEMMKTQINTFKEFLLQYNKITEICFKDCVN-HFISREITKKEESCAVNCLEKYMKMTSRISMRMQEFQMLQN 82 (94)
Q Consensus 4 ~l~~~~q~~~~~~q~~q~~~f~~~~~~lt~~Cf~kCV~-~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~~~~ 82 (94)
+....+++.+.+.|+..+.+ +||+|+..|++|||+ .|..++|+++|.+||||||.||++++..|+++++++.+..+
T Consensus 7 q~~~~~k~q~Ae~E~emm~d---~fNrl~~tC~~KCI~~~y~EaeLtKGE~~CiDRCVaKy~~~n~~vG~~lq~~~~~~e 83 (90)
T KOG3480|consen 7 QTVDQQKAQMAELEVEMMSD---MFNRLTNTCHKKCIPPRYKEAELTKGESVCIDRCVAKYLDVNEKVGKKLQAMGQGDE 83 (90)
T ss_pred cccCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhCCcccccccccCchhhHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 45567888888999999999 999999999999996 69999999999999999999999999999999998877666
Q ss_pred HH
Q psy16108 83 EQ 84 (94)
Q Consensus 83 e~ 84 (94)
+.
T Consensus 84 ~~ 85 (90)
T KOG3480|consen 84 AA 85 (90)
T ss_pred HH
Confidence 54
No 6
>KOG3377|consensus
Probab=92.45 E-value=0.73 Score=32.64 Aligned_cols=56 Identities=18% Similarity=0.370 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCC----CCchhHhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 21 FKEFLLQYNKITEICFKDCVNHFISR----EITKKEESCAVNCLEKYMKMTSRISMRMQE 76 (94)
Q Consensus 21 ~~~f~~~~~~lt~~Cf~kCV~~~~~~----~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e 76 (94)
|-+|+.-+++-+-.|-+|=-.+.+.+ +.....++|+.+||++++.+---+.+++.+
T Consensus 78 l~~FQ~RL~Rc~m~C~Dk~~~~~~~~~~~~~~~~~~e~Cvn~cvd~~v~liP~m~k~MK~ 137 (143)
T KOG3377|consen 78 LGKFQDRLNRCLMVCNDKFEASKLQGSKRLKAVQQFESCVNKCVDDHVGLIPTMVKRMKE 137 (143)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 44555566666666666543322222 245567799999999999999988888764
No 7
>PF05811 DUF842: Eukaryotic protein of unknown function (DUF842); InterPro: IPR008560 This family consists of a number of conserved eukaryotic proteins of unknown function. The sequences carry three sets of CxxxC motifs, which might suggest a type of zinc-finger formation.
Probab=90.86 E-value=3.8 Score=28.08 Aligned_cols=56 Identities=18% Similarity=0.416 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCC----CchhHhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 21 FKEFLLQYNKITEICFKDCVNHFISRE----ITKKEESCAVNCLEKYMKMTSRISMRMQE 76 (94)
Q Consensus 21 ~~~f~~~~~~lt~~Cf~kCV~~~~~~~----Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e 76 (94)
+..|+.-+++-+-.|.++=-..++.+. ....=+.|+..|+++|+..--.|.+|+.+
T Consensus 70 l~~FQ~rlqrC~~~C~dk~~d~~~~~~~~~~~~~~~e~C~~~Cvd~hi~llP~l~~r~k~ 129 (131)
T PF05811_consen 70 LEQFQNRLQRCVMHCQDKAKDKMDPNPNESDAEKQLESCVNKCVDDHIKLLPSLTKRMKK 129 (131)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Confidence 445555777777777776555432111 11222589999999999999999988863
No 8
>KOG3377|consensus
Probab=75.97 E-value=21 Score=25.36 Aligned_cols=43 Identities=16% Similarity=0.428 Sum_probs=28.9
Q ss_pred HHHHHhhcCCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 34 ICFKDCVNHFISREITKKEESCAVNCLEKYMKMTSRISMRMQEFQ 78 (94)
Q Consensus 34 ~Cf~kCV~~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~ 78 (94)
+|-..|..+ ..+. -..-..||+.|+....++..++..-+.+++
T Consensus 40 rCaa~Ccdd-~r~~-~e~v~~ci~~c~~pl~~aQ~~~~~El~~FQ 82 (143)
T KOG3377|consen 40 RCAAECCDD-SRAS-EEAVNCCIECCVPPLTKAQQYVQSELGKFQ 82 (143)
T ss_pred HHHHHHHcc-cccc-HHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 466666654 2222 233468999999999999999877665543
No 9
>PF08095 Toxin_25: Hefutoxin family; InterPro: IPR012630 This family consists of the hefutoxins that are found in the venom of the scorpion Heterometrus fulvipes (Indian black scorpion). These toxins, kappa-hefutoxin1 and kappa-hefutoxin2, exhibit no homology to any known toxins. The hefutoxins are potassium channel toxins [].; GO: 0009405 pathogenesis, 0005576 extracellular region; PDB: 1HP9_A.
Probab=61.08 E-value=1.7 Score=21.46 Aligned_cols=19 Identities=32% Similarity=1.024 Sum_probs=11.8
Q ss_pred HHHHhhcCCCCCCCchhHhHHHHHH
Q psy16108 35 CFKDCVNHFISREITKKEESCAVNC 59 (94)
Q Consensus 35 Cf~kCV~~~~~~~Ls~~E~~Ci~nC 59 (94)
||..|+.. ...|++|-.+|
T Consensus 4 cyrscwk~------g~deetck~~c 22 (22)
T PF08095_consen 4 CYRSCWKA------GHDEETCKERC 22 (22)
T ss_dssp TTTHHHHH------HS-TTHHHHH-
T ss_pred hHHHHHHc------cCcHHHHHhcC
Confidence 77777764 33677887776
No 10
>PF05811 DUF842: Eukaryotic protein of unknown function (DUF842); InterPro: IPR008560 This family consists of a number of conserved eukaryotic proteins of unknown function. The sequences carry three sets of CxxxC motifs, which might suggest a type of zinc-finger formation.
Probab=51.09 E-value=76 Score=21.60 Aligned_cols=43 Identities=14% Similarity=0.417 Sum_probs=28.8
Q ss_pred HHHHHHhhcCCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 33 EICFKDCVNHFISREITKKEESCAVNCLEKYMKMTSRISMRMQEF 77 (94)
Q Consensus 33 ~~Cf~kCV~~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~ 77 (94)
-.|-.+|..+ ++.+ -..=..||.+|..--..+...|..-|..+
T Consensus 31 f~C~a~Ccdd-~~~s-~e~V~~Cve~C~~pl~~aq~~vq~El~~F 73 (131)
T PF05811_consen 31 FKCAAKCCDD-SSAS-MEQVQRCVERCQQPLQQAQNYVQNELEQF 73 (131)
T ss_pred HHHHHHHhhC-CCCC-HHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 3566666644 2222 22446999999999999988887655543
No 11
>PRK10363 cpxP periplasmic repressor CpxP; Reviewed
Probab=34.33 E-value=70 Score=23.18 Aligned_cols=21 Identities=14% Similarity=0.221 Sum_probs=14.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q psy16108 4 QLNEAQQNEMMKTQINTFKEF 24 (94)
Q Consensus 4 ~l~~~~q~~~~~~q~~q~~~f 24 (94)
=|||+||..+.+.....+.+.
T Consensus 123 lLTPEQKaq~~~~~~~rm~~~ 143 (166)
T PRK10363 123 LLTPEQQAVLNEKHQQRMEQL 143 (166)
T ss_pred hCCHHHHHHHHHHHHHHHHHH
Confidence 378888888877555555553
No 12
>smart00157 PRP Major prion protein. The prion protein is a major component of scrapie-associated fibrils in Creutzfeldt-Jakob disease, kuru, Gerstmann-Straussler syndrome and bovine spongiform encephalopathy.
Probab=33.75 E-value=1e+02 Score=23.13 Aligned_cols=56 Identities=18% Similarity=0.246 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhCC
Q psy16108 27 QYNKITEICFKDCVNHFISREITKKEESCAVNCLEKYMKMTSRISMRMQE---FQMLQNEQMLAASGG 91 (94)
Q Consensus 27 ~~~~lt~~Cf~kCV~~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e---~~~~~~e~~~~~~~~ 91 (94)
.+++++..|++.=|+.+....-++. +.|.++..+|++|..+ +.+-++|..++.+.|
T Consensus 148 s~~~Fv~dC~N~tv~~~~~~~t~kg---------~n~te~d~kim~rvv~~mc~tqyq~~~~~~~~~g 206 (217)
T smart00157 148 NQNNFVHDCVNITIKQHTVTTTTKG---------ENFTETDVKMMERVVEQMCITQYQRESQAYYQRG 206 (217)
T ss_pred chhhHHHHHHhhheeeeEeccccCC---------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4578888999998876554443343 3466677777777665 455555655554433
No 13
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=33.67 E-value=65 Score=20.20 Aligned_cols=37 Identities=22% Similarity=0.399 Sum_probs=25.0
Q ss_pred CCCCCCHHHHHHHHH-H-----HHHHHHHHHHHHHHHHHHHHH
Q psy16108 1 MGDQLNEAQQNEMMK-T-----QINTFKEFLLQYNKITEICFK 37 (94)
Q Consensus 1 ~~~~l~~~~q~~~~~-~-----q~~q~~~f~~~~~~lt~~Cf~ 37 (94)
||.++++++=.++.. . -.-.+.+|..++.+++-.|.+
T Consensus 44 lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~~~~~~ 86 (88)
T cd05029 44 IGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALALIYNE 86 (88)
T ss_pred cCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHhh
Confidence 466677766555553 1 123478888899999988875
No 14
>PF13801 Metal_resist: Heavy-metal resistance; PDB: 3EPV_C 2Y3D_A 2Y3H_D 2Y3G_B 2Y3B_A 2Y39_A 3LAY_H.
Probab=32.97 E-value=1.2e+02 Score=18.60 Aligned_cols=20 Identities=20% Similarity=0.106 Sum_probs=13.7
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy16108 4 QLNEAQQNEMMKTQINTFKE 23 (94)
Q Consensus 4 ~l~~~~q~~~~~~q~~q~~~ 23 (94)
+||++|+.++..+......+
T Consensus 41 ~Lt~eQ~~~l~~~~~~~~~~ 60 (125)
T PF13801_consen 41 NLTPEQQAKLRALMDEFRQE 60 (125)
T ss_dssp -TTHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 79999999998754444333
No 15
>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.
Probab=32.33 E-value=1.4e+02 Score=19.34 Aligned_cols=32 Identities=16% Similarity=0.339 Sum_probs=27.2
Q ss_pred CchhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 48 ITKKEESCAVNCLEKYMKMTSRISMRMQEFQM 79 (94)
Q Consensus 48 Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~ 79 (94)
.+..+..|+..|.+-|-++...+...+..+..
T Consensus 65 ~~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~ 96 (148)
T smart00856 65 KDPRLKAALKDCLELYDDAVDSLEKALEELKS 96 (148)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46788999999999999999999887776553
No 16
>KOG2688|consensus
Probab=30.74 E-value=3e+02 Score=22.55 Aligned_cols=51 Identities=10% Similarity=0.245 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 24 FLLQYNKITEICFKDCVNHFISREITKKEESCAVNCLEKYMKMTSRISMRMQ 75 (94)
Q Consensus 24 f~~~~~~lt~~Cf~kCV~~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~ 75 (94)
++..-.+...+||..|+++ ....+..++.-=.-.=+......+.+|....-
T Consensus 131 ~le~~s~~i~~~f~~cl~d-~~~~~~~~kk~~~~~i~n~lf~Iyfri~~~~L 181 (394)
T KOG2688|consen 131 LLEAASRTISRLFSSCLSD-RRADLEESKKVAMLYIVNQLFQIYFRIEKLLL 181 (394)
T ss_pred HHHHHHHHHHHHHHHHhCc-cccccccchhhHHHHHHHHHHHHHHHHhhHHH
Confidence 4666778888999999987 56777777776666667788887777766543
No 17
>PF05892 Tricho_coat: Trichovirus coat protein; InterPro: IPR008879 This family consists of several coat proteins which are specific to the ssRNA positive-strand, no DNA stage viruses such as the Trichoviruses and Vitiviruses.; GO: 0019028 viral capsid
Probab=29.53 E-value=87 Score=23.26 Aligned_cols=52 Identities=13% Similarity=0.216 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---hhc---CCCCCCCchhHhHHHHHHHHHHHHHHHH
Q psy16108 18 INTFKEFLLQYNKITEICFKD---CVN---HFISREITKKEESCAVNCLEKYMKMTSR 69 (94)
Q Consensus 18 ~~q~~~f~~~~~~lt~~Cf~k---CV~---~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~ 69 (94)
+..+--+-.+|.+++..|++. |.+ ..+-..|+..|.++|.++-.|.+++-..
T Consensus 120 l~~~g~~TnL~~Kmp~~g~k~PqV~FDFn~GL~l~~L~~~e~~vIq~ln~RLfrtE~a 177 (194)
T PF05892_consen 120 LASMGVYTNLYKKMPKLGGKEPQVMFDFNSGLDLSRLTKEEAKVIQNLNQRLFRTEGA 177 (194)
T ss_pred HHhcchHhHHHHhhHhhcCCCCeEeeecccCcchhhcCHHHHHHHHHHHHHHHHHHHh
Confidence 334444556899999998753 222 3455789999999999998888877544
No 18
>PF15047 DUF4533: Protein of unknown function (DUF4533)
Probab=29.33 E-value=2.6e+02 Score=21.31 Aligned_cols=56 Identities=20% Similarity=0.268 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 20 TFKEFLLQYNKITEICFKDCVNHFISREITKKEESCAVNCLEKYMKMTSRISMRMQEF 77 (94)
Q Consensus 20 q~~~f~~~~~~lt~~Cf~kCV~~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~ 77 (94)
-++++....|+|++. |+.+... .-..+..+|.+||....+-.+....-+.......
T Consensus 15 ~~qd~~s~TN~L~el-fN~~m~t-qi~~i~mkEd~~IKd~~eqmi~~~kemQ~~vd~k 70 (225)
T PF15047_consen 15 HMQDLFSFTNTLTEL-FNSHMNT-QILLIAMKEDSNIKDNFEQMIKIFKEMQSVVDAK 70 (225)
T ss_pred HHHHHHHHHHHHHHH-HHhcccc-ceeeeeecccCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888888888876 7777764 3456789999999999998888877776665543
No 19
>PRK11546 zraP zinc resistance protein; Provisional
Probab=29.18 E-value=1.8e+02 Score=20.51 Aligned_cols=13 Identities=31% Similarity=0.256 Sum_probs=11.4
Q ss_pred CCCHHHHHHHHHH
Q psy16108 4 QLNEAQQNEMMKT 16 (94)
Q Consensus 4 ~l~~~~q~~~~~~ 16 (94)
+|||++|+.++.+
T Consensus 43 ~LT~EQQa~~q~I 55 (143)
T PRK11546 43 PLTTEQQAAWQKI 55 (143)
T ss_pred cCCHHHHHHHHHH
Confidence 6999999999864
No 20
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=27.92 E-value=3.7e+02 Score=22.82 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=30.0
Q ss_pred CCCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 45 SREITKKEESCAVNCLEKYMKMTSRISMRMQEFQM 79 (94)
Q Consensus 45 ~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~ 79 (94)
++.|+.+|..+++.|.+=|-++-..+...+.++..
T Consensus 81 ~~~l~~r~~~Al~DC~El~~davd~L~~S~~~l~~ 115 (530)
T PLN02933 81 GPNLTHRERCAFEDCLGLLDDTISDLTTAISKLRS 115 (530)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34689999999999999999999999988876653
No 21
>TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
Probab=26.18 E-value=2.1e+02 Score=19.33 Aligned_cols=31 Identities=13% Similarity=0.377 Sum_probs=26.3
Q ss_pred chhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 49 TKKEESCAVNCLEKYMKMTSRISMRMQEFQM 79 (94)
Q Consensus 49 s~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~ 79 (94)
+..+..|+..|.+-|-++...+...+..+..
T Consensus 91 ~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~ 121 (178)
T TIGR01614 91 DPRDKSALEDCVELYSDAVDALDKALASLKS 121 (178)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5688999999999999999998877766653
No 22
>KOG3196|consensus
Probab=25.97 E-value=43 Score=25.35 Aligned_cols=32 Identities=25% Similarity=0.295 Sum_probs=26.4
Q ss_pred HHHHHHHHHhhc----CCCCCCCchhHhHHHHHHHH
Q psy16108 30 KITEICFKDCVN----HFISREITKKEESCAVNCLE 61 (94)
Q Consensus 30 ~lt~~Cf~kCV~----~~~~~~Ls~~E~~Ci~nCv~ 61 (94)
.+.+.|-++|-. .-++...|..|..|+-+|+.
T Consensus 131 ~i~ea~~k~lgi~~Gett~d~~Ftl~e~eClGaCvn 166 (233)
T KOG3196|consen 131 DILEACKKQLGIKVGETTKDGLFTLEEVECLGACVN 166 (233)
T ss_pred HHHHHHHHHhCccccccccccceeeecchhhhhhcc
Confidence 577888888875 34677889999999999985
No 23
>PF09889 DUF2116: Uncharacterized protein containing a Zn-ribbon (DUF2116); InterPro: IPR019216 This entry contains various hypothetical prokaryotic proteins whose functions are unknown. They contain a conserved zinc ribbon motif in the N-terminal part and a predicted transmembrane segment in the C-terminal part.
Probab=25.50 E-value=1.1e+02 Score=18.35 Aligned_cols=27 Identities=30% Similarity=0.593 Sum_probs=22.7
Q ss_pred CCCCchhHhHHHHHHHHHHHHHHHHHH
Q psy16108 45 SREITKKEESCAVNCLEKYMKMTSRIS 71 (94)
Q Consensus 45 ~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~ 71 (94)
+.++..+|.-|-+.|-+.|..-..+..
T Consensus 10 G~~Ip~~~~fCS~~C~~~~~k~qk~~~ 36 (59)
T PF09889_consen 10 GKPIPPDESFCSPKCREEYRKRQKRMR 36 (59)
T ss_pred CCcCCcchhhhCHHHHHHHHHHHHHHH
Confidence 456777899999999999998877765
No 24
>PRK12750 cpxP periplasmic repressor CpxP; Reviewed
Probab=25.49 E-value=1.1e+02 Score=21.72 Aligned_cols=17 Identities=12% Similarity=0.085 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy16108 24 FLLQYNKITEICFKDCV 40 (94)
Q Consensus 24 f~~~~~~lt~~Cf~kCV 40 (94)
|..++..-...|+++|-
T Consensus 145 ~~e~~~~r~~~~~~~~~ 161 (170)
T PRK12750 145 FQELQQERMQECQDKMH 161 (170)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33355566678888884
No 25
>PF06384 ICAT: Beta-catenin-interacting protein ICAT; InterPro: IPR009428 This family consists of several eukaryotic beta-catenin-interacting (ICAT) proteins. Beta-catenin is a multifunctional protein involved in both cell adhesion and transcriptional activation. Transcription mediated by the beta-catenin/Tcf complex is involved in embryological development and is upregulated in various cancers. ICAT selectively inhibits beta-catenin/Tcf binding in vivo, without disrupting beta-catenin/cadherin interactions [].; GO: 0008013 beta-catenin binding; PDB: 1LUJ_B 1T08_B 1M1E_B.
Probab=24.20 E-value=1e+02 Score=19.65 Aligned_cols=23 Identities=9% Similarity=0.302 Sum_probs=11.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Q psy16108 1 MGDQLNEAQQNEMMKTQINTFKE 23 (94)
Q Consensus 1 ~~~~l~~~~q~~~~~~q~~q~~~ 23 (94)
+|.+|||++..-+....-.-+.+
T Consensus 29 Lge~Ls~eE~~FL~~~~~~~ls~ 51 (78)
T PF06384_consen 29 LGEKLSPEEEAFLEAHSSASLSQ 51 (78)
T ss_dssp TT----HHHHHHHHHTHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHhhHHHHH
Confidence 57788888887776533333333
No 26
>PF06644 ATP11: ATP11 protein; InterPro: IPR010591 This family consists of several eukaryotic ATP11 proteins. The expression of functional F1-ATPase requires two proteins which are encoded by the ATP11 and ATP12 genes []. Atp11p is a molecular chaperone of the mitochondrial matrix that participates in the biogenesis pathway to form F1, which is the catalytic unit of ATP synthase. It binds to the free beta subunits of F1, which prevents the beta subunit from associating with itself in non-productive complex. It also allows for the formation of a (alpha beta)3 hexamer []. ; GO: 0006461 protein complex assembly, 0005739 mitochondrion; PDB: 2P4F_A.
Probab=23.83 E-value=1.6e+02 Score=22.64 Aligned_cols=19 Identities=26% Similarity=0.478 Sum_probs=15.7
Q ss_pred CCCchhHhHHHHHHHHHHH
Q psy16108 46 REITKKEESCAVNCLEKYM 64 (94)
Q Consensus 46 ~~Ls~~E~~Ci~nCv~Ky~ 64 (94)
..|+..|..|+-+|+.+|.
T Consensus 213 ~~ls~~eAq~L~~~lQ~FY 231 (266)
T PF06644_consen 213 SGLSKQEAQLLVNQLQRFY 231 (266)
T ss_dssp SS--HHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHh
Confidence 4499999999999999999
No 27
>PF11239 DUF3040: Protein of unknown function (DUF3040); InterPro: IPR021401 Some members in this family of proteins with unknown function are annotated as membrane proteins however this cannot be confirmed.
Probab=23.82 E-value=97 Score=19.17 Aligned_cols=19 Identities=16% Similarity=0.212 Sum_probs=15.1
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy16108 5 LNEAQQNEMMKTQINTFKE 23 (94)
Q Consensus 5 l~~~~q~~~~~~q~~q~~~ 23 (94)
||+.||..+.++|..-..+
T Consensus 3 LSe~E~r~L~eiEr~L~~~ 21 (82)
T PF11239_consen 3 LSEHEQRRLEEIERQLRAD 21 (82)
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 8999999999887555544
No 28
>PRK13760 putative RNA-associated protein; Provisional
Probab=23.80 E-value=2.4e+02 Score=21.40 Aligned_cols=20 Identities=25% Similarity=0.380 Sum_probs=14.3
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy16108 4 QLNEAQQNEMMKTQINTFKE 23 (94)
Q Consensus 4 ~l~~~~q~~~~~~q~~q~~~ 23 (94)
+||++||..+.+...+++..
T Consensus 86 Qlt~~eR~~~~e~k~r~Ii~ 105 (231)
T PRK13760 86 QLTAEQRREMLEEKRRQIIN 105 (231)
T ss_pred cCCHHHHHHHHHHHHHHHHH
Confidence 78999999887765444444
No 29
>COG1500 Predicted exosome subunit [Translation, ribosomal structure and biogenesis]
Probab=23.55 E-value=1.3e+02 Score=22.95 Aligned_cols=18 Identities=28% Similarity=0.449 Sum_probs=13.4
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy16108 4 QLNEAQQNEMMKTQINTF 21 (94)
Q Consensus 4 ~l~~~~q~~~~~~q~~q~ 21 (94)
+||++||.+|.+.-.+++
T Consensus 86 QlTaeqR~~m~e~k~rqI 103 (234)
T COG1500 86 QLTAEQRREMLEEKKRQI 103 (234)
T ss_pred eccHHHHHHHHHHHHHHH
Confidence 899999999976544433
No 30
>smart00777 Mad3_BUB1_I Mad3/BUB1 hoMad3/BUB1 homology region 1. Proteins containing this domain are checkpoint proteins involved in cell division. This region has been shown to be essential for the binding of the binding of BUB1 and MAD3 to CDC20p.
Probab=23.32 E-value=1.1e+02 Score=20.92 Aligned_cols=26 Identities=4% Similarity=0.061 Sum_probs=18.8
Q ss_pred cCCCCCCCchhHhHHHHHHHHHHHHH
Q psy16108 41 NHFISREITKKEESCAVNCLEKYMKM 66 (94)
Q Consensus 41 ~~~~~~~Ls~~E~~Ci~nCv~Ky~~~ 66 (94)
.+||++.-.++=..-+.+|+.+|.+.
T Consensus 34 ~~~p~g~~~s~L~~lLerc~~~f~~~ 59 (125)
T smart00777 34 ENYPQGGKESGLLTLLERCIRYFEDD 59 (125)
T ss_pred HhCCCCCchhhHHHHHHHHHHHhhhh
Confidence 46776654556678899999887664
No 31
>PF03617 IBV_3A: IBV 3A protein ; InterPro: IPR005214 The gene product of gene 3 from Infectious bronchitis virus (strain CL190). Currently, the function of this protein remains unknown.
Probab=23.16 E-value=89 Score=18.67 Aligned_cols=15 Identities=33% Similarity=0.846 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHhhc
Q psy16108 27 QYNKITEICFKDCVN 41 (94)
Q Consensus 27 ~~~~lt~~Cf~kCV~ 41 (94)
++-++.=.||..||-
T Consensus 15 lwcklvlscf~ecvi 29 (57)
T PF03617_consen 15 LWCKLVLSCFRECVI 29 (57)
T ss_pred HHHHHHHHHHHHHHH
Confidence 566777888888874
No 32
>KOG0869|consensus
Probab=23.10 E-value=1.1e+02 Score=22.32 Aligned_cols=23 Identities=13% Similarity=0.498 Sum_probs=19.6
Q ss_pred CCCCCchhHhHHHHHHHHHHHHH
Q psy16108 44 ISREITKKEESCAVNCLEKYMKM 66 (94)
Q Consensus 44 ~~~~Ls~~E~~Ci~nCv~Ky~~~ 66 (94)
+..++++.-+.|+.-||.-||.+
T Consensus 48 ~naKIsKDAKE~vQECVSEfISF 70 (168)
T KOG0869|consen 48 ANAKISKDAKETVQECVSEFISF 70 (168)
T ss_pred cccccchHHHHHHHHHHHHHHHH
Confidence 46788999999999999999864
No 33
>PRK12751 cpxP periplasmic stress adaptor protein CpxP; Reviewed
Probab=22.25 E-value=1.3e+02 Score=21.39 Aligned_cols=22 Identities=14% Similarity=0.232 Sum_probs=15.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH
Q psy16108 4 QLNEAQQNEMMKTQINTFKEFL 25 (94)
Q Consensus 4 ~l~~~~q~~~~~~q~~q~~~f~ 25 (94)
-|||+||..+.+.....+.+++
T Consensus 129 lLTPEQra~l~~~~e~r~~~~~ 150 (162)
T PRK12751 129 LLTPEQKEALNKKHQERIEKLQ 150 (162)
T ss_pred cCCHHHHHHHHHHHHHHHHHHH
Confidence 4899999999875445555543
No 34
>PF14920 MTBP_C: MDM2-binding
Probab=21.80 E-value=2.1e+02 Score=22.09 Aligned_cols=40 Identities=13% Similarity=0.221 Sum_probs=34.3
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy16108 52 EESCAVNCLEKYMKMTSRISMRMQEFQMLQNEQMLAASGG 91 (94)
Q Consensus 52 E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~~~~e~~~~~~~~ 91 (94)
+..|...|..|.++.+.+..+=|.....+-.|+.-+|.+.
T Consensus 207 ~H~cF~aCSqRLFeISKfyLKDLKTSRGL~eEMKKtA~~N 246 (251)
T PF14920_consen 207 AHECFKACSQRLFEISKFYLKDLKTSRGLFEEMKKTANNN 246 (251)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHhcC
Confidence 6789999999999999999998888888888887777654
No 35
>PF06075 DUF936: Plant protein of unknown function (DUF936); InterPro: IPR010341 This family consists of several hypothetical proteins from plants. The function of this family is unknown.
Probab=21.17 E-value=3.8e+02 Score=23.00 Aligned_cols=47 Identities=13% Similarity=0.284 Sum_probs=29.8
Q ss_pred HHHHHhhcCCCCCCCc-hhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 34 ICFKDCVNHFISREIT-KKEESCAVNCLEKYMKMTSRISMRMQEFQMLQN 82 (94)
Q Consensus 34 ~Cf~kCV~~~~~~~Ls-~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~~~~ 82 (94)
-|-=+|...|. +|. +.....-.-|+++||.++..+.+.......++.
T Consensus 354 E~lir~Ls~fs--eL~ssak~~~P~~~v~~Fl~lh~~l~~a~~~~~Sl~~ 401 (579)
T PF06075_consen 354 ESLIRCLSMFS--ELCSSAKEDNPQPTVEQFLSLHQDLVQAVTIAESLSA 401 (579)
T ss_pred HHHHHHHHHHH--HHHhhccccCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444554332 333 444455677999999999999887766555544
Done!