Query psy16108
Match_columns 94
No_of_seqs 102 out of 706
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 21:05:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16108.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16108hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dxr_A Mitochondrial import in 99.9 3.7E-28 1.3E-32 157.5 7.0 77 3-79 4-81 (89)
2 2bsk_A Mitochondrial import in 99.9 8.6E-28 2.9E-32 155.9 5.3 78 13-90 6-83 (89)
3 2bsk_B Mitochondrial import in 99.9 1.5E-27 5.3E-32 154.7 4.7 78 17-94 11-89 (90)
4 3cjh_B Mitochondrial import in 99.9 6.3E-25 2.1E-29 134.4 6.6 58 20-77 6-63 (64)
5 3dxr_B Mitochondrial import in 99.9 7.1E-25 2.4E-29 143.9 6.9 73 5-80 15-88 (95)
6 3cjh_A Mitochondrial import in 99.8 6.4E-22 2.2E-26 121.4 3.9 52 22-77 3-54 (64)
7 3lay_A Zinc resistance-associa 50.2 32 0.0011 23.8 5.1 18 4-21 67-84 (175)
8 1ter_A Tertiapin; toxin; NMR { 45.7 7.1 0.00024 19.0 0.8 10 33-42 12-21 (26)
9 1hp9_A Kappa-hefutoxin 1; scor 42.3 2.1 7.2E-05 21.1 -1.5 21 35-61 4-24 (26)
10 3htu_B Vacuolar protein-sortin 42.2 39 0.0013 18.0 5.4 32 2-33 1-33 (39)
11 1xg2_B Pectinesterase inhibito 35.0 80 0.0027 19.7 4.9 31 49-79 65-95 (153)
12 1x91_A Invertase/pectin methyl 35.0 74 0.0025 20.0 4.8 31 49-79 65-95 (153)
13 1m1e_B ICAT; cell adhesion, cy 33.4 46 0.0016 20.6 3.3 25 1-25 29-53 (81)
14 2plx_B Peptide inhibitor; heli 26.2 24 0.00083 17.1 0.9 7 53-59 18-24 (26)
15 2lqx_A Trypsin inhibitor BWI-2 29.6 17 0.00057 19.4 0.0 17 27-43 20-36 (41)
16 2dqa_A Lysozyme; enzyme, subst 23.0 73 0.0025 21.0 3.1 16 53-68 64-79 (124)
17 2p4f_A Similar to SP|P32453 sa 22.7 68 0.0023 24.1 3.2 23 45-67 239-261 (299)
18 3sjd_D Golgi to ER traffic pro 21.2 1.2E+02 0.004 16.8 3.8 15 1-15 10-24 (46)
No 1
>3dxr_A Mitochondrial import inner membrane translocase subunit TIM9; alpha-propeller, helix-turn-helix, intramolecular disulfides., chaperone; 2.50A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.7e-28 Score=157.55 Aligned_cols=77 Identities=38% Similarity=0.769 Sum_probs=63.1
Q ss_pred CCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 3 DQLNEAQQNEMMK-TQINTFKEFLLQYNKITEICFKDCVNHFISREITKKEESCAVNCLEKYMKMTSRISMRMQEFQM 79 (94)
Q Consensus 3 ~~l~~~~q~~~~~-~q~~q~~~f~~~~~~lt~~Cf~kCV~~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~ 79 (94)
++|+++++.+|.. ++..++++|+.+||+||+.||+|||++||+++|+++|.+||+|||+|||+++.+|++||+++++
T Consensus 4 ~~l~~~~~~el~~~~~e~q~k~~~~l~~~lte~Cf~kCv~~~~~~~L~~~E~~Ci~~Cv~Ky~~~~~~v~~~~~~~~~ 81 (89)
T 3dxr_A 4 DALNSKEQQEFQKVVEQKQMKDFMRLYSNLVERCFTDCVNDFTTSKLTNKEQTCIMKCSEKFLKHSERVGQRFQEQNA 81 (89)
T ss_dssp ----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4899999999986 6788999999999999999999999999999999999999999999999999999999997643
No 2
>2bsk_A Mitochondrial import inner membrane translocase subunit TIM9 A; protein transport, mitochondrial protein import, TIM complex; 3.3A {Homo sapiens} SCOP: g.83.1.1
Probab=99.94 E-value=8.6e-28 Score=155.89 Aligned_cols=78 Identities=53% Similarity=0.932 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy16108 13 MMKTQINTFKEFLLQYNKITEICFKDCVNHFISREITKKEESCAVNCLEKYMKMTSRISMRMQEFQMLQNEQMLAASG 90 (94)
Q Consensus 13 ~~~~q~~q~~~f~~~~~~lt~~Cf~kCV~~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~~~~e~~~~~~~ 90 (94)
+...|+.++++|+.+||+||++||+|||++||+++|+++|++||+|||+|||+++.+|++||++++++++|.+.++++
T Consensus 6 ~~~~q~~q~~~~~~l~n~lte~Cf~KCv~~~~~~~L~~~E~~Ci~~Cv~Ky~d~~~~V~~~~~~~~~~~~~~~~~~~~ 83 (89)
T 2bsk_A 6 PESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYHIQQNEALAAKAG 83 (89)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHCCCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCcCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445678889999999999999999999999999999999999999999999999999999999999999988877654
No 3
>2bsk_B Mitochondrial import inner membrane translocase subunit TIM10; protein transport, mitochondrial protein import, TIM complex; 3.3A {Homo sapiens} SCOP: g.83.1.1
Probab=99.94 E-value=1.5e-27 Score=154.73 Aligned_cols=78 Identities=26% Similarity=0.548 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q psy16108 17 QINTFKEFLLQYNKITEICFKDCVN-HFISREITKKEESCAVNCLEKYMKMTSRISMRMQEFQMLQNEQMLAASGGNKP 94 (94)
Q Consensus 17 q~~q~~~f~~~~~~lt~~Cf~kCV~-~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~~~~e~~~~~~~~~~~ 94 (94)
+..++++|+.+||+||+.||+|||+ +||+++|+++|++||+|||+|||+++.+|++||++..+.++|.+.+.++|+.|
T Consensus 11 ~e~q~~~~~~l~n~lte~Cf~KCv~~~~~~~~L~~~E~~Ci~~Cv~Ky~d~~~~V~~~~~~~~~~~~e~~~~~~~~~~~ 89 (90)
T 2bsk_B 11 AELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKLTELSMQDEELMKRVQQSSGP 89 (90)
T ss_dssp --CTTTTTHHHHHHHHHHHHHHHCCTTCCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCcCcCChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 4456667777999999999999994 78999999999999999999999999999999999999999999999999887
No 4
>3cjh_B Mitochondrial import inner membrane translocase S TIM8; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=6.3e-25 Score=134.42 Aligned_cols=58 Identities=26% Similarity=0.619 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 20 TFKEFLLQYNKITEICFKDCVNHFISREITKKEESCAVNCLEKYMKMTSRISMRMQEF 77 (94)
Q Consensus 20 q~~~f~~~~~~lt~~Cf~kCV~~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~ 77 (94)
+++.|+.+||+||+.||+|||++||+++|+++|++||+||++|||+++.+|++||+++
T Consensus 6 ~~~~~~~~~~~lt~~Cf~kCv~~~~~~~L~~~E~~Ci~~Cv~ky~~~~~~v~~~~~~~ 63 (64)
T 3cjh_B 6 SKQKVQMSIHQFTNICFKKCVESVNDSNLSSQEEQCLSNCVNRFLDTNIRIVNGLQNT 63 (64)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCcCChhHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4455556999999999999999999999999999999999999999999999999864
No 5
>3dxr_B Mitochondrial import inner membrane translocase subunit TIM10; alpha-propeller, helix-turn-helix, intramolecular disulfides., chaperone; 2.50A {Saccharomyces cerevisiae}
Probab=99.91 E-value=7.1e-25 Score=143.90 Aligned_cols=73 Identities=25% Similarity=0.528 Sum_probs=58.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 5 LNEAQQNEMMKTQINTFKEFLLQYNKITEICFKDCVN-HFISREITKKEESCAVNCLEKYMKMTSRISMRMQEFQML 80 (94)
Q Consensus 5 l~~~~q~~~~~~q~~q~~~f~~~~~~lt~~Cf~kCV~-~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~~ 80 (94)
.+++|+..+.++ ++++|+.+||+||++||+|||+ +|++++|+++|++||+|||+|||++|.+|++||+++++.
T Consensus 15 ~~~~qk~~~aE~---q~~~~~~l~nklte~Cf~KCV~~~~~~~~L~~~E~~Ci~~Cv~Ky~d~~~~V~~~~q~~~q~ 88 (95)
T 3dxr_B 15 LSSQQKIQAAEA---ELDLVTDMFNKLVNNCYKKCINTSYSEGELNKNESSCLDRCVAKYFETNVQVGENMQKMGQS 88 (95)
T ss_dssp --CTTTTHHHHH---HHHHHHHHHHHHHHHHHHHHCCCTTCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455555444 5555666999999999999999 689999999999999999999999999999999976644
No 6
>3cjh_A Mitochondrial import inner membrane translocase S TIM13; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=6.4e-22 Score=121.35 Aligned_cols=52 Identities=29% Similarity=0.503 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 22 KEFLLQYNKITEICFKDCVNHFISREITKKEESCAVNCLEKYMKMTSRISMRMQEF 77 (94)
Q Consensus 22 ~~f~~~~~~lt~~Cf~kCV~~~~~~~Ls~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~ 77 (94)
+.|+.+||+||+.||+|||++ | |+++|++||+||++|||+++++|+++|.+.
T Consensus 3 a~~~~l~~~lt~~Cf~kCv~~-~---L~~~E~~Ci~~Cv~Ky~~~~~~v~~~~~~~ 54 (64)
T 3cjh_A 3 ANATELVNKISENCFEKCLTS-P---YATRNDACIDQCLAKYMRSWNVISKAYISR 54 (64)
T ss_dssp --CHHHHHHHHHHHHHHHCCT-T---CCSCCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHCCC-c---CChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455669999999999999987 4 999999999999999999999999999953
No 7
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=50.20 E-value=32 Score=23.81 Aligned_cols=18 Identities=22% Similarity=0.187 Sum_probs=12.7
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy16108 4 QLNEAQQNEMMKTQINTF 21 (94)
Q Consensus 4 ~l~~~~q~~~~~~q~~q~ 21 (94)
+||++||+++.++-.+..
T Consensus 67 nLT~EQq~ql~~I~~e~r 84 (175)
T 3lay_A 67 PLTTEQQATAQKIYDDYY 84 (175)
T ss_dssp -CCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHH
Confidence 699999999987533333
No 8
>1ter_A Tertiapin; toxin; NMR {Apis mellifera} SCOP: j.20.1.1
Probab=45.69 E-value=7.1 Score=19.01 Aligned_cols=10 Identities=30% Similarity=1.042 Sum_probs=8.2
Q ss_pred HHHHHHhhcC
Q psy16108 33 EICFKDCVNH 42 (94)
Q Consensus 33 ~~Cf~kCV~~ 42 (94)
..||.||-.+
T Consensus 12 hmcwkkcgkk 21 (26)
T 1ter_A 12 HMCWKKCGKK 21 (26)
T ss_dssp HHHHHHHHCC
T ss_pred hHHHHHhCcc
Confidence 4699999865
No 9
>1hp9_A Kappa-hefutoxin 1; scorpion toxin, gating modifier, voltage-gated potassium channel; NMR {Synthetic} SCOP: j.33.2.1
Probab=42.26 E-value=2.1 Score=21.05 Aligned_cols=21 Identities=29% Similarity=0.969 Sum_probs=13.1
Q ss_pred HHHHhhcCCCCCCCchhHhHHHHHHHH
Q psy16108 35 CFKDCVNHFISREITKKEESCAVNCLE 61 (94)
Q Consensus 35 Cf~kCV~~~~~~~Ls~~E~~Ci~nCv~ 61 (94)
|+..|+.. ...|++|-.+|..
T Consensus 4 cyr~cw~~------g~deetck~~cs~ 24 (26)
T 1hp9_A 4 CYRNCWRE------GNDEETCKERCXX 24 (26)
T ss_dssp TTTHHHHH------HSCTTHHHHHC--
T ss_pred HHHHHHHc------cCcHHHHHHHhcc
Confidence 55566653 3468899988864
No 10
>3htu_B Vacuolar protein-sorting-associated protein 20; ESCRT-II, ESCRT-III, VPS20, VPS25, MVB, cytoplasm, nucleus, polymorphism, protein transport; 2.00A {Homo sapiens}
Probab=42.22 E-value=39 Score=17.99 Aligned_cols=32 Identities=16% Similarity=0.330 Sum_probs=22.4
Q ss_pred CCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q psy16108 2 GDQLNEAQQNEMM-KTQINTFKEFLLQYNKITE 33 (94)
Q Consensus 2 ~~~l~~~~q~~~~-~~q~~q~~~f~~~~~~lt~ 33 (94)
|-..|+.|++.+. ..|...+++.+.-++.+.+
T Consensus 1 ~skiT~qDrAIL~LK~QRDkL~qyqkri~~~~~ 33 (39)
T 3htu_B 1 GSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLE 33 (39)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4468999999996 4666667776666655544
No 11
>1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis}
Probab=35.03 E-value=80 Score=19.73 Aligned_cols=31 Identities=16% Similarity=0.170 Sum_probs=27.1
Q ss_pred chhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 49 TKKEESCAVNCLEKYMKMTSRISMRMQEFQM 79 (94)
Q Consensus 49 s~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~ 79 (94)
+..+..++..|.+-|-++-..+...+.++..
T Consensus 65 ~~~~~~al~dC~e~y~~a~~~L~~a~~~l~~ 95 (153)
T 1xg2_B 65 DPKLKGRYETCSENYADAIDSLGQAKQFLTS 95 (153)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5788999999999999999999988877654
No 12
>1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A
Probab=35.00 E-value=74 Score=20.02 Aligned_cols=31 Identities=6% Similarity=0.277 Sum_probs=26.9
Q ss_pred chhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16108 49 TKKEESCAVNCLEKYMKMTSRISMRMQEFQM 79 (94)
Q Consensus 49 s~~E~~Ci~nCv~Ky~~~~~~v~~r~~e~~~ 79 (94)
+..+..++..|.+-|-++-..+...+.++..
T Consensus 65 ~~~~~~al~dC~e~y~~a~~~L~~a~~~l~~ 95 (153)
T 1x91_A 65 DPRSKLAYRSCVDEYESAIGNLEEAFEHLAS 95 (153)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5788999999999999999999888876653
No 13
>1m1e_B ICAT; cell adhesion, cytoskeleton, armadillo repeats, transciption factor, structural protein; 2.10A {Homo sapiens} SCOP: a.161.1.1 PDB: 1luj_B 1t08_B
Probab=33.42 E-value=46 Score=20.56 Aligned_cols=25 Identities=12% Similarity=0.124 Sum_probs=17.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
Q psy16108 1 MGDQLNEAQQNEMMKTQINTFKEFL 25 (94)
Q Consensus 1 ~~~~l~~~~q~~~~~~q~~q~~~f~ 25 (94)
||.+|+|++..-|...--.-+.+|.
T Consensus 29 LGe~Ls~eE~~FL~~~~~~~ls~Fe 53 (81)
T 1m1e_B 29 MGSNLTASEEEFLRTYAGVVNSQLS 53 (81)
T ss_dssp TTCCCCHHHHHHHHHTHHHHHHHHT
T ss_pred hcccCCHHHHHHHHHHhhhHHHHHH
Confidence 6889999998888764434444444
No 14
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=26.22 E-value=24 Score=17.07 Aligned_cols=7 Identities=43% Similarity=1.089 Sum_probs=5.3
Q ss_pred hHHHHHH
Q psy16108 53 ESCAVNC 59 (94)
Q Consensus 53 ~~Ci~nC 59 (94)
..|++||
T Consensus 18 rrcldnc 24 (26)
T 2plx_B 18 RRCLDNC 24 (26)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 4688888
No 15
>2lqx_A Trypsin inhibitor BWI-2C; helical hairpin, hydrolase inhibitor; NMR {Fagopyrum esculentum}
Probab=29.60 E-value=17 Score=19.41 Aligned_cols=17 Identities=24% Similarity=0.530 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHhhcCC
Q psy16108 27 QYNKITEICFKDCVNHF 43 (94)
Q Consensus 27 ~~~~lt~~Cf~kCV~~~ 43 (94)
-...++.+|-.||-.+|
T Consensus 20 wstemvhrcekkceekf 36 (41)
T 2lqx_A 20 WSTEMVHRCEKKCEEKF 36 (41)
Confidence 34456667777776554
No 16
>2dqa_A Lysozyme; enzyme, substrate complex, hydrolase; HET: NAG BGC; 1.60A {Tapes japonica}
Probab=23.00 E-value=73 Score=20.97 Aligned_cols=16 Identities=31% Similarity=0.831 Sum_probs=12.7
Q ss_pred hHHHHHHHHHHHHHHH
Q psy16108 53 ESCAVNCLEKYMKMTS 68 (94)
Q Consensus 53 ~~Ci~nCv~Ky~~~~~ 68 (94)
-.|..+||..||.-+.
T Consensus 64 ~~Ca~~tV~~Ym~ry~ 79 (124)
T 2dqa_A 64 INCSSKCVQQYMKRYA 79 (124)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC
Confidence 4788999999987554
No 17
>2p4f_A Similar to SP|P32453 saccharomyces cerevisiae YNL ATP11; half barrel, chaperone; HET: P6G; 1.40A {Candida glabrata cbs 138}
Probab=22.71 E-value=68 Score=24.12 Aligned_cols=23 Identities=0% Similarity=0.163 Sum_probs=20.2
Q ss_pred CCCCchhHhHHHHHHHHHHHHHH
Q psy16108 45 SREITKKEESCAVNCLEKYMKMT 67 (94)
Q Consensus 45 ~~~Ls~~E~~Ci~nCv~Ky~~~~ 67 (94)
++.|+..|..|+-+|+.+|....
T Consensus 239 ~~~ls~~eAq~Lv~~lQ~FY~~~ 261 (299)
T 2p4f_A 239 DSNVSLQDAQLLLLNVQRFYGAM 261 (299)
T ss_dssp TSSCCHHHHHHHHHHHHHHTTGG
T ss_pred CCCCCHHHHHHHHHHHHHHhCCc
Confidence 35799999999999999999763
No 18
>3sjd_D Golgi to ER traffic protein 2; ATPase, receptor complex, TA-protein biogenesis, GET pathway hydrolase-transport protein complex; HET: ADP; 4.60A {Saccharomyces cerevisiae}
Probab=21.20 E-value=1.2e+02 Score=16.77 Aligned_cols=15 Identities=33% Similarity=0.795 Sum_probs=8.7
Q ss_pred CCCCCCHHHHHHHHH
Q psy16108 1 MGDQLNEAQQNEMMK 15 (94)
Q Consensus 1 ~~~~l~~~~q~~~~~ 15 (94)
||..|++++|+++-.
T Consensus 10 ~~~~lsa~EkaRLrR 24 (46)
T 3sjd_D 10 MGSELTEAEKRRLLR 24 (46)
T ss_dssp -----CHHHHHHHHH
T ss_pred ccccccHHHHHHHHH
Confidence 788899999999874
Done!