Query psy16110
Match_columns 719
No_of_seqs 617 out of 4426
Neff 9.7
Searched_HMMs 46136
Date Fri Aug 16 21:08:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16110.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16110hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.8E-51 3.9E-56 494.2 38.1 526 145-704 75-606 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.9E-51 4.1E-56 494.0 34.6 512 165-706 70-585 (968)
3 KOG4194|consensus 100.0 5.7E-44 1.2E-48 364.2 6.8 395 269-717 55-456 (873)
4 KOG4194|consensus 100.0 1.2E-43 2.7E-48 361.7 8.2 367 191-653 80-447 (873)
5 KOG0472|consensus 100.0 1.6E-41 3.4E-46 332.4 -18.6 477 189-706 45-542 (565)
6 KOG0472|consensus 100.0 5.8E-41 1.3E-45 328.4 -17.0 479 165-688 46-546 (565)
7 KOG0618|consensus 100.0 1.2E-37 2.5E-42 334.9 -4.6 466 166-702 23-510 (1081)
8 KOG0618|consensus 100.0 8.2E-38 1.8E-42 336.0 -5.9 487 168-707 2-491 (1081)
9 KOG4237|consensus 100.0 1.2E-33 2.6E-38 277.0 -3.7 171 96-325 29-199 (498)
10 KOG0444|consensus 100.0 3E-32 6.5E-37 280.2 -5.5 357 292-680 9-373 (1255)
11 KOG0444|consensus 100.0 6.4E-31 1.4E-35 270.5 -4.3 364 241-637 6-378 (1255)
12 KOG4237|consensus 99.9 2.3E-29 4.9E-34 247.1 -4.0 416 243-702 68-498 (498)
13 PLN03210 Resistant to P. syrin 99.9 4.5E-21 9.8E-26 231.3 29.8 336 282-656 550-904 (1153)
14 PLN03210 Resistant to P. syrin 99.9 2.3E-21 5E-26 233.8 27.0 343 338-703 553-904 (1153)
15 PRK15387 E3 ubiquitin-protein 99.9 8.3E-22 1.8E-26 220.5 19.0 224 423-689 242-465 (788)
16 PRK15387 E3 ubiquitin-protein 99.9 1.3E-21 2.8E-26 219.0 18.6 262 219-538 202-463 (788)
17 PRK15370 E3 ubiquitin-protein 99.8 1.3E-19 2.9E-24 204.4 15.6 248 400-682 178-428 (754)
18 PRK15370 E3 ubiquitin-protein 99.8 3.5E-19 7.7E-24 200.9 14.4 249 378-659 178-429 (754)
19 cd00116 LRR_RI Leucine-rich re 99.7 6.5E-18 1.4E-22 177.3 1.1 213 491-704 76-319 (319)
20 cd00116 LRR_RI Leucine-rich re 99.6 1.7E-17 3.7E-22 174.1 0.5 161 520-681 137-319 (319)
21 KOG0617|consensus 99.5 5.2E-16 1.1E-20 136.2 -4.9 160 494-663 31-191 (264)
22 KOG0617|consensus 99.5 8.6E-16 1.9E-20 134.8 -4.1 159 216-395 31-190 (264)
23 PF14580 LRR_9: Leucine-rich r 99.3 1.3E-12 2.8E-17 120.9 2.1 129 216-350 17-147 (175)
24 PF14580 LRR_9: Leucine-rich r 99.2 2.7E-12 5.8E-17 118.8 2.8 85 217-303 41-126 (175)
25 KOG1909|consensus 99.2 8.4E-13 1.8E-17 129.5 -0.7 189 516-704 88-310 (382)
26 KOG1909|consensus 99.2 1.8E-12 4E-17 127.2 -1.2 86 572-657 212-310 (382)
27 KOG3207|consensus 99.2 3.1E-12 6.8E-17 128.9 -0.0 209 470-682 119-339 (505)
28 KOG0532|consensus 99.1 2.1E-12 4.5E-17 134.0 -3.1 187 459-659 61-248 (722)
29 KOG3207|consensus 99.1 9.3E-12 2E-16 125.6 1.0 135 399-533 196-339 (505)
30 KOG1259|consensus 99.1 8.4E-12 1.8E-16 119.6 0.0 203 470-686 212-416 (490)
31 COG4886 Leucine-rich repeat (L 99.1 1.3E-10 2.8E-15 125.7 7.9 198 451-663 97-295 (394)
32 KOG1259|consensus 99.1 1.2E-11 2.7E-16 118.5 -1.2 127 165-303 285-412 (490)
33 KOG0531|consensus 99.1 2.3E-11 4.9E-16 131.7 0.1 211 166-411 74-288 (414)
34 KOG0532|consensus 99.1 7.5E-12 1.6E-16 130.0 -3.5 191 146-357 57-248 (722)
35 COG4886 Leucine-rich repeat (L 99.1 1.8E-10 4E-15 124.4 7.0 200 475-688 96-296 (394)
36 KOG0531|consensus 99.0 4.1E-11 8.8E-16 129.7 -0.6 128 400-534 72-200 (414)
37 PF13855 LRR_8: Leucine rich r 98.9 6.3E-10 1.4E-14 84.6 2.6 59 622-680 2-60 (61)
38 PF13855 LRR_8: Leucine rich r 98.9 1E-09 2.2E-14 83.5 3.4 61 597-657 1-61 (61)
39 PLN03150 hypothetical protein; 98.8 1.1E-08 2.5E-13 115.8 10.1 106 575-680 420-526 (623)
40 KOG4658|consensus 98.8 3.4E-09 7.5E-14 122.4 5.6 127 165-301 524-653 (889)
41 PLN03150 hypothetical protein; 98.7 2E-08 4.4E-13 113.7 8.4 106 599-704 420-527 (623)
42 KOG1859|consensus 98.7 3.6E-10 7.8E-15 120.6 -5.4 176 517-704 106-291 (1096)
43 KOG4658|consensus 98.7 2.2E-08 4.8E-13 115.8 6.5 103 219-324 524-628 (889)
44 KOG1859|consensus 98.6 1.7E-09 3.7E-14 115.6 -6.5 158 155-327 102-292 (1096)
45 PF13306 LRR_5: Leucine rich r 98.4 4.4E-07 9.5E-12 81.0 7.0 114 213-332 7-120 (129)
46 KOG4579|consensus 98.4 1.3E-08 2.8E-13 86.9 -3.6 130 574-706 28-160 (177)
47 PF13306 LRR_5: Leucine rich r 98.4 9.3E-07 2E-11 78.9 7.7 128 178-317 2-129 (129)
48 COG5238 RNA1 Ran GTPase-activa 98.3 5.7E-08 1.2E-12 92.5 -1.6 168 493-660 117-318 (388)
49 COG5238 RNA1 Ran GTPase-activa 98.3 1.3E-07 2.9E-12 90.1 -0.3 193 515-707 87-318 (388)
50 KOG2982|consensus 98.2 2E-07 4.4E-12 90.0 -0.7 39 289-327 70-110 (418)
51 KOG1644|consensus 98.2 3E-06 6.4E-11 77.8 6.4 106 243-352 43-149 (233)
52 KOG4579|consensus 98.2 1.5E-07 3.4E-12 80.4 -1.9 111 598-710 28-141 (177)
53 KOG1644|consensus 98.2 2.8E-06 6.1E-11 77.9 5.9 105 166-279 21-126 (233)
54 KOG2982|consensus 98.2 7.9E-07 1.7E-11 86.0 2.0 206 473-682 46-262 (418)
55 KOG2120|consensus 98.2 4.5E-08 9.9E-13 94.4 -6.5 84 374-457 256-348 (419)
56 KOG2120|consensus 98.1 3.1E-08 6.7E-13 95.5 -7.8 133 339-482 206-348 (419)
57 PF12799 LRR_4: Leucine Rich r 98.0 5.5E-06 1.2E-10 57.5 3.2 39 646-685 2-40 (44)
58 PF12799 LRR_4: Leucine Rich r 97.8 1.1E-05 2.5E-10 56.0 2.6 38 598-636 2-39 (44)
59 PRK15386 type III secretion pr 97.8 8.3E-05 1.8E-09 77.7 9.7 135 493-656 49-188 (426)
60 PRK15386 type III secretion pr 97.8 8.6E-05 1.9E-09 77.6 9.5 135 470-632 50-188 (426)
61 KOG4341|consensus 97.8 5.3E-07 1.1E-11 91.3 -6.8 134 422-555 293-437 (483)
62 KOG4341|consensus 97.6 3E-06 6.6E-11 86.0 -4.7 207 444-656 213-437 (483)
63 KOG2123|consensus 97.4 5.2E-06 1.1E-10 79.8 -6.0 104 242-349 19-123 (388)
64 KOG3665|consensus 97.3 8.5E-05 1.9E-09 84.3 2.2 105 165-276 123-230 (699)
65 KOG3665|consensus 97.2 0.00013 2.9E-09 82.7 2.2 133 189-326 122-262 (699)
66 KOG2123|consensus 97.0 1.5E-05 3.2E-10 76.7 -7.3 100 446-550 18-123 (388)
67 KOG2739|consensus 96.8 0.0007 1.5E-08 65.3 2.6 62 619-680 63-127 (260)
68 KOG2739|consensus 96.7 0.0007 1.5E-08 65.3 1.8 39 290-328 91-130 (260)
69 KOG1947|consensus 96.2 0.00067 1.5E-08 75.4 -2.3 62 471-532 242-307 (482)
70 KOG1947|consensus 95.9 0.0008 1.7E-08 74.8 -3.1 191 444-647 185-389 (482)
71 PF00560 LRR_1: Leucine Rich R 95.7 0.0033 7.2E-08 36.2 0.3 21 670-691 1-21 (22)
72 smart00369 LRR_TYP Leucine-ric 95.1 0.022 4.7E-07 34.4 2.5 23 668-690 1-23 (26)
73 smart00370 LRR Leucine-rich re 95.1 0.022 4.7E-07 34.4 2.5 23 668-690 1-23 (26)
74 KOG4308|consensus 95.0 0.00012 2.5E-09 79.6 -13.3 186 497-683 88-304 (478)
75 KOG4308|consensus 95.0 0.00018 3.9E-09 78.2 -12.1 208 473-680 88-329 (478)
76 PF00560 LRR_1: Leucine Rich R 94.5 0.017 3.7E-07 33.3 0.9 16 220-235 2-17 (22)
77 PF13504 LRR_7: Leucine rich r 94.4 0.025 5.5E-07 30.2 1.4 16 670-685 2-17 (17)
78 cd01775 CYR1_RA Ubiquitin doma 93.9 0.016 3.4E-07 46.7 -0.1 62 49-110 2-96 (97)
79 PF13504 LRR_7: Leucine rich r 92.8 0.057 1.2E-06 28.8 1.1 11 244-254 3-13 (17)
80 smart00370 LRR Leucine-rich re 92.6 0.092 2E-06 31.6 1.9 21 218-238 2-22 (26)
81 smart00369 LRR_TYP Leucine-ric 92.6 0.092 2E-06 31.6 1.9 21 218-238 2-22 (26)
82 KOG3864|consensus 90.7 0.025 5.4E-07 52.7 -3.0 82 573-654 101-185 (221)
83 KOG3864|consensus 88.3 0.078 1.7E-06 49.5 -1.7 82 424-505 102-185 (221)
84 KOG0473|consensus 86.4 0.024 5.3E-07 53.7 -6.1 93 255-355 31-123 (326)
85 KOG0473|consensus 86.3 0.01 2.2E-07 56.2 -8.7 94 610-706 31-125 (326)
86 PF01462 LRRNT: Leucine rich r 81.3 0.87 1.9E-05 27.9 1.2 20 104-128 2-21 (28)
87 smart00364 LRR_BAC Leucine-ric 80.9 1 2.2E-05 26.9 1.3 18 669-686 2-19 (26)
88 smart00365 LRR_SD22 Leucine-ri 76.9 2.1 4.5E-05 25.7 1.8 17 669-685 2-18 (26)
89 PF13516 LRR_6: Leucine Rich r 73.4 2 4.3E-05 25.1 1.1 15 621-635 2-16 (24)
90 smart00013 LRRNT Leucine rich 70.2 3.7 8E-05 26.3 1.9 20 104-128 2-21 (33)
91 KOG4242|consensus 67.7 22 0.00047 38.1 7.8 32 24-57 44-78 (553)
92 KOG3763|consensus 66.3 3.3 7.1E-05 45.0 1.7 64 619-682 216-283 (585)
93 KOG4242|consensus 64.7 38 0.00082 36.4 8.9 59 599-657 415-480 (553)
94 smart00368 LRR_RI Leucine rich 62.5 6.4 0.00014 24.0 1.8 15 669-683 2-16 (28)
95 KOG3763|consensus 53.0 6.9 0.00015 42.6 1.4 38 517-554 215-254 (585)
96 TIGR00864 PCC polycystin catio 42.7 16 0.00035 47.8 2.5 35 627-661 1-35 (2740)
97 smart00367 LRR_CC Leucine-rich 39.7 21 0.00046 21.1 1.5 12 447-458 2-13 (26)
98 TIGR00864 PCC polycystin catio 29.3 31 0.00067 45.4 1.9 32 603-634 1-32 (2740)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.8e-51 Score=494.17 Aligned_cols=526 Identities=25% Similarity=0.254 Sum_probs=376.2
Q ss_pred hcccccCCcCccccccCCCCcccEEEcCCCCcc-ccCcccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEE
Q psy16110 145 SQRWVGHQILPMQIFSSSDIPIRRLDFSGNALR-RLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRIL 223 (719)
Q Consensus 145 ~~~~~~~~~lp~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L 223 (719)
.+...++.......|... ++|+.|+|++|++. .+|..+|. .+++|++|+|++|.+.+.+|. +.+++|++|
T Consensus 75 ~L~~~~i~~~~~~~~~~l-~~L~~L~Ls~n~~~~~ip~~~~~-~l~~L~~L~Ls~n~l~~~~p~-------~~l~~L~~L 145 (968)
T PLN00113 75 DLSGKNISGKISSAIFRL-PYIQTINLSNNQLSGPIPDDIFT-TSSSLRYLNLSNNNFTGSIPR-------GSIPNLETL 145 (968)
T ss_pred EecCCCccccCChHHhCC-CCCCEEECCCCccCCcCChHHhc-cCCCCCEEECcCCccccccCc-------cccCCCCEE
Confidence 333334433333344433 46888888888876 67777663 567888888888887765542 357778888
Q ss_pred ECcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCc
Q psy16110 224 DLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLT 303 (719)
Q Consensus 224 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~ 303 (719)
+|++|.+....+..++++++|++|++++|.+....+..++++++|++|++++|.+....|..+..+++|++|++++|.+.
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 88888877665666777888888888888776443346778888888888888877777777778888888888888887
Q ss_pred ccCcccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCCEEeCCCCCCCccccccccCcccccccccccCCCccEE
Q psy16110 304 TIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSL 383 (719)
Q Consensus 304 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L 383 (719)
+..+..++++++|++|++++|.+++..+. .+..+++|++|++++|+++ +.+|..+..+++|++|
T Consensus 226 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~-----~l~~l~~L~~L~L~~n~l~-----------~~~p~~l~~l~~L~~L 289 (968)
T PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNLTGPIPS-----SLGNLKNLQYLFLYQNKLS-----------GPIPPSIFSLQKLISL 289 (968)
T ss_pred CcCChhHhcCCCCCEEECcCceeccccCh-----hHhCCCCCCEEECcCCeee-----------ccCchhHhhccCcCEE
Confidence 77777788888888888888877654433 4566778888888887763 2345556667788888
Q ss_pred ECCCCCCcCcCC--cchhccCCEEEccCCcccccccC-ccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCC
Q psy16110 384 DLNGNFLINLES--TGLEDTLDNLNVRDNQITTLSSS-ALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHL 460 (719)
Q Consensus 384 ~L~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~~-~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l 460 (719)
++++|.+....+ +..+++|+.|++++|.+.+..+. ...+++|+.|++++|.+.+..+..++.+++|+.|++++|...
T Consensus 290 ~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~ 369 (968)
T PLN00113 290 DLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLT 369 (968)
T ss_pred ECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeE
Confidence 888887764433 34556788888888877654433 334777888888888887766777777788888888887433
Q ss_pred CCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCcc
Q psy16110 461 SSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSL 540 (719)
Q Consensus 461 ~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l 540 (719)
+.+|. .+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.++...+..|..+++|+.|++++|.+++..+..+
T Consensus 370 ~~~p~-~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 448 (968)
T PLN00113 370 GEIPE-GLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRK 448 (968)
T ss_pred eeCCh-hHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhh
Confidence 44443 35567778888888887777666677778888888888887775555567778888888888888877777777
Q ss_pred CCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCC
Q psy16110 541 YGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGL 620 (719)
Q Consensus 541 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 620 (719)
..+++|+.|++++|++.+..+..+. .++|+.|++++|++++..|..+..+++|++|++++|++.+..+..+.++
T Consensus 449 ~~l~~L~~L~L~~n~~~~~~p~~~~------~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 522 (968)
T PLN00113 449 WDMPSLQMLSLARNKFFGGLPDSFG------SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSC 522 (968)
T ss_pred ccCCCCcEEECcCceeeeecCcccc------cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCc
Confidence 7778888888888877654444332 3678888888888887777777788888888888888876666667778
Q ss_pred CCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCcCC-CcChHhhcCcccc-EEe
Q psy16110 621 SYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLE-KLPERLFNTFLYT-NYD 698 (719)
Q Consensus 621 ~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L-~L~ 698 (719)
++|++|+|++|.+++..+..+..+++|+.|++++|++++..|..+..+++|++|++++|+++ .+|.. ..+..+ ...
T Consensus 523 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~--~~~~~~~~~~ 600 (968)
T PLN00113 523 KKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST--GAFLAINASA 600 (968)
T ss_pred cCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc--chhcccChhh
Confidence 88888888888888777777778888888888888888777777777788888888888776 45542 222334 445
Q ss_pred cCCCce
Q psy16110 699 MAPNLV 704 (719)
Q Consensus 699 l~~N~l 704 (719)
+.+|+.
T Consensus 601 ~~~n~~ 606 (968)
T PLN00113 601 VAGNID 606 (968)
T ss_pred hcCCcc
Confidence 566664
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.9e-51 Score=493.98 Aligned_cols=512 Identities=23% Similarity=0.232 Sum_probs=446.9
Q ss_pred cccEEEcCCCCccccCcccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccC
Q psy16110 165 PIRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNL 244 (719)
Q Consensus 165 ~L~~L~Ls~n~i~~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 244 (719)
+++.|||++|.++......|. .+++|++|+|++|.+.+.+|. ..+.++++|++|+|++|++....+. ..+++|
T Consensus 70 ~v~~L~L~~~~i~~~~~~~~~-~l~~L~~L~Ls~n~~~~~ip~----~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L 142 (968)
T PLN00113 70 RVVSIDLSGKNISGKISSAIF-RLPYIQTINLSNNQLSGPIPD----DIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNL 142 (968)
T ss_pred cEEEEEecCCCccccCChHHh-CCCCCCEEECCCCccCCcCCh----HHhccCCCCCEEECcCCccccccCc--cccCCC
Confidence 599999999999866666664 679999999999999887664 4566899999999999999865442 568999
Q ss_pred cEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCcEEEcCCC
Q psy16110 245 LELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYN 324 (719)
Q Consensus 245 ~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 324 (719)
++|++++|.++...+..++++++|++|++++|.+....|..+.++++|++|++++|.+.+..|..++++++|++|++++|
T Consensus 143 ~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 222 (968)
T PLN00113 143 ETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYN 222 (968)
T ss_pred CEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCC
Confidence 99999999998544447999999999999999998888888999999999999999999988999999999999999999
Q ss_pred CCCCcCCCccccccccCCCCCCEEeCCCCCCCccccccccCcccccccccccCCCccEEECCCCCCcCcCC--cchhccC
Q psy16110 325 RLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLES--TGLEDTL 402 (719)
Q Consensus 325 ~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~--~~~~~~L 402 (719)
.++...+. .+..+++|++|++++|.++ +.+|..+..+++|++|++++|.+.+..+ +..+++|
T Consensus 223 ~l~~~~p~-----~l~~l~~L~~L~L~~n~l~-----------~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 286 (968)
T PLN00113 223 NLSGEIPY-----EIGGLTSLNHLDLVYNNLT-----------GPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKL 286 (968)
T ss_pred ccCCcCCh-----hHhcCCCCCEEECcCceec-----------cccChhHhCCCCCCEEECcCCeeeccCchhHhhccCc
Confidence 99865444 4678999999999999874 3456678889999999999999875433 5566899
Q ss_pred CEEEccCCcccccccC-ccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCC
Q psy16110 403 DNLNVRDNQITTLSSS-ALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAA 481 (719)
Q Consensus 403 ~~L~l~~n~l~~~~~~-~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~ 481 (719)
++|++++|.+.+..+. ...+++|+.|++++|.+.+..+..+..+++|+.|++++|...+.+|. .+..+++|+.|++++
T Consensus 287 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~-~l~~~~~L~~L~Ls~ 365 (968)
T PLN00113 287 ISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPK-NLGKHNNLTVLDLST 365 (968)
T ss_pred CEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCCh-HHhCCCCCcEEECCC
Confidence 9999999998865443 44589999999999999998888899999999999999954455654 477889999999999
Q ss_pred CCCCCCCchhhcCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCcCCcccC
Q psy16110 482 TGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKG 561 (719)
Q Consensus 482 n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 561 (719)
|++.+..+..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+++..+
T Consensus 366 n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 445 (968)
T PLN00113 366 NNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRIN 445 (968)
T ss_pred CeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccC
Confidence 99988777788889999999999999987767778999999999999999999889999999999999999999987655
Q ss_pred CcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccC
Q psy16110 562 DYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDY 641 (719)
Q Consensus 562 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l 641 (719)
..+. .+++|++|++++|.+.+..|..+ ..++|++|++++|++++..+..+.++++|+.|++++|++.+..+..+
T Consensus 446 ~~~~-----~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 519 (968)
T PLN00113 446 SRKW-----DMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDEL 519 (968)
T ss_pred hhhc-----cCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHH
Confidence 4433 35899999999999998888765 46899999999999998777778999999999999999998888889
Q ss_pred CCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCcCCCcChHhhcCcccc-EEecCCCceee
Q psy16110 642 GYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERLFNTFLYT-NYDMAPNLVFQ 706 (719)
Q Consensus 642 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~L~l~~N~l~~ 706 (719)
.++++|++|+|++|++++..|..|..+++|+.|||++|+++...+..+.+++.| .+++++|++..
T Consensus 520 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 520 SSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred cCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 999999999999999999999899999999999999999985444567889999 99999999965
No 3
>KOG4194|consensus
Probab=100.00 E-value=5.7e-44 Score=364.21 Aligned_cols=395 Identities=27% Similarity=0.444 Sum_probs=315.7
Q ss_pred cEEEcCCCcCcccCCCcccCC--CccCEEEccCCCCcccCcccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCC
Q psy16110 269 RILSMAYNRIGTLKADSFLSQ--RWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIH 346 (719)
Q Consensus 269 ~~L~Ls~n~i~~~~~~~~~~l--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~ 346 (719)
..||.+++.+..+....+.+. +.-+.|++++|++..+....|.++++|+++++.+|.++.+|.- -....+|+
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f------~~~sghl~ 128 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRF------GHESGHLE 128 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhhcccc------ccccccee
Confidence 344555555544433222222 2234577777777777777777777777777777777777651 12234477
Q ss_pred EEeCCCCCCCccccccccCcccccccccccCCCccEEECCCCCCcCcCCcchhccCCEEEccCCcccccccCccC-CCCc
Q psy16110 347 ILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSALN-YKLL 425 (719)
Q Consensus 347 ~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~-~~~L 425 (719)
.|+|.+|.|+++.... ++.++.|++|||+.|.++.++. ..+. -.++
T Consensus 129 ~L~L~~N~I~sv~se~-----------L~~l~alrslDLSrN~is~i~~----------------------~sfp~~~ni 175 (873)
T KOG4194|consen 129 KLDLRHNLISSVTSEE-----------LSALPALRSLDLSRNLISEIPK----------------------PSFPAKVNI 175 (873)
T ss_pred EEeeeccccccccHHH-----------HHhHhhhhhhhhhhchhhcccC----------------------CCCCCCCCc
Confidence 7777777766655432 2234455555555555554443 2222 3567
Q ss_pred cEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccC
Q psy16110 426 TKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAH 505 (719)
Q Consensus 426 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~ 505 (719)
++|+|++|.|+.+....|..+.+|..|.|+.| .++.+|...|..+++|+.|++..|.|..+....|.++++|+.|.+..
T Consensus 176 ~~L~La~N~It~l~~~~F~~lnsL~tlkLsrN-rittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqr 254 (873)
T KOG4194|consen 176 KKLNLASNRITTLETGHFDSLNSLLTLKLSRN-RITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQR 254 (873)
T ss_pred eEEeeccccccccccccccccchheeeecccC-cccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhh
Confidence 88888888888888888888888888888888 88888888888888999999999988888777889999999999999
Q ss_pred CcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCC
Q psy16110 506 NHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNEL 585 (719)
Q Consensus 506 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l 585 (719)
|.+..+..++|..+.++++|+|+.|++..+..+++.++++|+.|++++|.+..+..+.+. .+++|++|+||+|++
T Consensus 255 N~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Ws-----ftqkL~~LdLs~N~i 329 (873)
T KOG4194|consen 255 NDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWS-----FTQKLKELDLSSNRI 329 (873)
T ss_pred cCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhh-----hcccceeEecccccc
Confidence 999999999999999999999999999999889999999999999999999888776654 358999999999999
Q ss_pred CCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccC---cccCCCCCCCCEEeCCCCcCCCCCc
Q psy16110 586 TYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTID---DYDYGYLPRLRKLNLNNNNIDAISE 662 (719)
Q Consensus 586 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~---~~~l~~l~~L~~L~Ls~N~l~~~~~ 662 (719)
+...+.+|..+..|++|+|++|.++.+...+|..+++|++|||++|.++... ...|.++++|+.|++.+|++..++.
T Consensus 330 ~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~k 409 (873)
T KOG4194|consen 330 TRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPK 409 (873)
T ss_pred ccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecch
Confidence 9999999999999999999999999999999999999999999999998543 3458889999999999999999999
Q ss_pred ccCCCCCCCcEEECCCCcCCCcChHhhcCcccc-EEecCCCceeeeccCCCccccC
Q psy16110 663 TCFFNSSQLQIINLSFNRLEKLPERLFNTFLYT-NYDMAPNLVFQSHLSGHRCECA 717 (719)
Q Consensus 663 ~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~L~l~~N~l~~~~~~~~~C~c~ 717 (719)
.+|..++.|++|||.+|.|.+|.++.|..+ .| +|.+..-.+ -|+|.
T Consensus 410 rAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssf--------lCDCq 456 (873)
T KOG4194|consen 410 RAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSF--------LCDCQ 456 (873)
T ss_pred hhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccce--------EEecc
Confidence 999999999999999999999999999998 89 888887777 79996
No 4
>KOG4194|consensus
Probab=100.00 E-value=1.2e-43 Score=361.73 Aligned_cols=367 Identities=31% Similarity=0.454 Sum_probs=242.7
Q ss_pred ccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCC-ccCcEEECCCCcCCcCCCCCCCCCCCCc
Q psy16110 191 LQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGC-DNLLELRMDHNRFTSIPSVSLNGPRALR 269 (719)
Q Consensus 191 L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~L~~n~l~~i~~~~l~~l~~L~ 269 (719)
-+.|++++|+++. +..+.|.++++|+.+++..|.++.+|. |++. .+|+.|+|.+|.|+++...+++.++.|+
T Consensus 80 t~~LdlsnNkl~~-----id~~~f~nl~nLq~v~l~~N~Lt~IP~--f~~~sghl~~L~L~~N~I~sv~se~L~~l~alr 152 (873)
T KOG4194|consen 80 TQTLDLSNNKLSH-----IDFEFFYNLPNLQEVNLNKNELTRIPR--FGHESGHLEKLDLRHNLISSVTSEELSALPALR 152 (873)
T ss_pred eeeeecccccccc-----CcHHHHhcCCcceeeeeccchhhhccc--ccccccceeEEeeeccccccccHHHHHhHhhhh
Confidence 3344444444443 334456677777777777777777765 3333 4477777777777777776777777777
Q ss_pred EEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCCEEe
Q psy16110 270 ILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILN 349 (719)
Q Consensus 270 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~ 349 (719)
+||||.|.|+.+....|..-.++++|+|++|.|+.+..+.|..+.+|..|.|+.|+++.++.. .|.++++|+.|+
T Consensus 153 slDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r-----~Fk~L~~L~~Ld 227 (873)
T KOG4194|consen 153 SLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQR-----SFKRLPKLESLD 227 (873)
T ss_pred hhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHH-----Hhhhcchhhhhh
Confidence 777777777777777777767777777777777777777777777777777777777777665 345566777777
Q ss_pred CCCCCCCccccccccCcccccccccccCCCccEEECCCCCCcCcCCcchhccCCEEEccCCcccccccCccCCCCccEEE
Q psy16110 350 LGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLD 429 (719)
Q Consensus 350 L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~ 429 (719)
|..|+|..++...|.| +++|+.|.
T Consensus 228 LnrN~irive~ltFqg--------------------------------------------------------L~Sl~nlk 251 (873)
T KOG4194|consen 228 LNRNRIRIVEGLTFQG--------------------------------------------------------LPSLQNLK 251 (873)
T ss_pred ccccceeeehhhhhcC--------------------------------------------------------chhhhhhh
Confidence 7776665443333322 23344444
Q ss_pred ccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCCcCC
Q psy16110 430 LSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLT 509 (719)
Q Consensus 430 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~ 509 (719)
+..|.+..+...+|..+.++++|+|+.| .+..+..+.+-++++|+.|++++|.|..|....|..+++|+.|+|+.|+++
T Consensus 252 lqrN~I~kL~DG~Fy~l~kme~l~L~~N-~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~ 330 (873)
T KOG4194|consen 252 LQRNDISKLDDGAFYGLEKMEHLNLETN-RLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT 330 (873)
T ss_pred hhhcCcccccCcceeeecccceeecccc-hhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccc
Confidence 4444444444555566666666666666 566666655666677777777777777777667777777777777777777
Q ss_pred CCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcC
Q psy16110 510 EIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLF 589 (719)
Q Consensus 510 ~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 589 (719)
.++++.|..+..|++|+|++|+++.+...+|..+++|++|+|++|.++....+ .
T Consensus 331 ~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IED--------------------------a 384 (873)
T KOG4194|consen 331 RLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIED--------------------------A 384 (873)
T ss_pred cCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEec--------------------------c
Confidence 77777777777777777777777777666777777777777777765532211 1
Q ss_pred cCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCC
Q psy16110 590 PSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLN 653 (719)
Q Consensus 590 ~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls 653 (719)
...|..+++|+.|.+.+|++..++..+|.++..|+.|||.+|.|..+.+.+|+.+ .|++|.+.
T Consensus 385 a~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 385 AVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMN 447 (873)
T ss_pred hhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhc
Confidence 2345566666777777777777777777777777777777777777666666666 66666554
No 5
>KOG0472|consensus
Probab=100.00 E-value=1.6e-41 Score=332.38 Aligned_cols=477 Identities=24% Similarity=0.330 Sum_probs=347.5
Q ss_pred ccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCCCCCCCC
Q psy16110 189 DTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRAL 268 (719)
Q Consensus 189 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~~L 268 (719)
..|+.+.+++|.+... .+++.++..|.+|++++|++...++ +++.+..++.|++++|++..+|+ .++.+.+|
T Consensus 45 v~l~~lils~N~l~~l------~~dl~nL~~l~vl~~~~n~l~~lp~-aig~l~~l~~l~vs~n~ls~lp~-~i~s~~~l 116 (565)
T KOG0472|consen 45 VDLQKLILSHNDLEVL------REDLKNLACLTVLNVHDNKLSQLPA-AIGELEALKSLNVSHNKLSELPE-QIGSLISL 116 (565)
T ss_pred cchhhhhhccCchhhc------cHhhhcccceeEEEeccchhhhCCH-HHHHHHHHHHhhcccchHhhccH-HHhhhhhh
Confidence 5688888999887753 2467888899999999999988887 46778889999999999999987 68888899
Q ss_pred cEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCCEE
Q psy16110 269 RILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHIL 348 (719)
Q Consensus 269 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L 348 (719)
+.++.++|.+..++ +.++.+..|+.++..+|+++..++ ++..+.+|..+++.+|+++..+++ .-.++.|++|
T Consensus 117 ~~l~~s~n~~~el~-~~i~~~~~l~dl~~~~N~i~slp~-~~~~~~~l~~l~~~~n~l~~l~~~------~i~m~~L~~l 188 (565)
T KOG0472|consen 117 VKLDCSSNELKELP-DSIGRLLDLEDLDATNNQISSLPE-DMVNLSKLSKLDLEGNKLKALPEN------HIAMKRLKHL 188 (565)
T ss_pred hhhhccccceeecC-chHHHHhhhhhhhccccccccCch-HHHHHHHHHHhhccccchhhCCHH------HHHHHHHHhc
Confidence 99999999988885 457888889999999999887754 677888888999999999888875 2347888889
Q ss_pred eCCCCCCCccccccccCcccccccccccCCCccEEECCCCCCcCcCCcchhccCCEEEccCCcccccccCcc-CCCCccE
Q psy16110 349 NLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSAL-NYKLLTK 427 (719)
Q Consensus 349 ~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~-~~~~L~~ 427 (719)
|...|.++. +|+.++.+.+|.-|++..|++..+|.+.-+..|+++.++.|++..++.... +++++..
T Consensus 189 d~~~N~L~t------------lP~~lg~l~~L~~LyL~~Nki~~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~v 256 (565)
T KOG0472|consen 189 DCNSNLLET------------LPPELGGLESLELLYLRRNKIRFLPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLV 256 (565)
T ss_pred ccchhhhhc------------CChhhcchhhhHHHHhhhcccccCCCCCccHHHHHHHhcccHHHhhHHHHhccccccee
Confidence 988887754 455567788888889999998888888888888888888888888887666 4888888
Q ss_pred EEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCC--CccEEEc--
Q psy16110 428 LDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELL--NLKYLCL-- 503 (719)
Q Consensus 428 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~--~L~~L~L-- 503 (719)
||+.+|++++.+. .+.-+++|+.||+++| .++.+|.. ++++ .|+.|.+.+|.+..+..+.+..-+ -|++|.=
T Consensus 257 LDLRdNklke~Pd-e~clLrsL~rLDlSNN-~is~Lp~s-Lgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~ 332 (565)
T KOG0472|consen 257 LDLRDNKLKEVPD-EICLLRSLERLDLSNN-DISSLPYS-LGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKI 332 (565)
T ss_pred eeccccccccCch-HHHHhhhhhhhcccCC-ccccCCcc-cccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhh
Confidence 8888888888854 4456788888888888 78888765 5667 788888888887776554433211 1222211
Q ss_pred cCCcCC----------CCCh---hhhcCCCCCCEEeCCCCccccccCCccCCCC--CCCEEEccCCcCCcccCCcCCCCC
Q psy16110 504 AHNHLT----------EIPE---MMFKNLLNLTYLDLSNNNIVNLRVGSLYGLP--SMKRLDLSFNKLTTFKGDYFNTKS 568 (719)
Q Consensus 504 ~~n~l~----------~~~~---~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~--~L~~L~L~~n~l~~~~~~~~~~~~ 568 (719)
..-+++ ..+. .......+.+.|++++-+++.++...|..-. -...+++++|++..+|.......
T Consensus 333 ~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lk- 411 (565)
T KOG0472|consen 333 KDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELK- 411 (565)
T ss_pred ccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHH-
Confidence 000110 0000 1112344566667766666665444443222 25666777777666654432211
Q ss_pred CCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCC
Q psy16110 569 KPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLR 648 (719)
Q Consensus 569 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~ 648 (719)
..+..+.+++|.+.-+ |..+..+++|..|++++|-+..+|.+ ++.+..|+.||++.|+|..+|. ....+..++
T Consensus 412 ----elvT~l~lsnn~isfv-~~~l~~l~kLt~L~L~NN~Ln~LP~e-~~~lv~Lq~LnlS~NrFr~lP~-~~y~lq~lE 484 (565)
T KOG0472|consen 412 ----ELVTDLVLSNNKISFV-PLELSQLQKLTFLDLSNNLLNDLPEE-MGSLVRLQTLNLSFNRFRMLPE-CLYELQTLE 484 (565)
T ss_pred ----HHHHHHHhhcCccccc-hHHHHhhhcceeeecccchhhhcchh-hhhhhhhheecccccccccchH-HHhhHHHHH
Confidence 1233445555555443 66677788888888888888888877 4566778888888888877665 445556677
Q ss_pred EEeCCCCcCCCCCcccCCCCCCCcEEECCCCcCCCcChHhhcCcccc-EEecCCCceee
Q psy16110 649 KLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERLFNTFLYT-NYDMAPNLVFQ 706 (719)
Q Consensus 649 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~L~l~~N~l~~ 706 (719)
.+-.++|++..+++..+.++.+|.+||+.+|.+..||+. ++++++| ++.+.||||.+
T Consensus 485 tllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~-LgnmtnL~hLeL~gNpfr~ 542 (565)
T KOG0472|consen 485 TLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPI-LGNMTNLRHLELDGNPFRQ 542 (565)
T ss_pred HHHhccccccccChHHhhhhhhcceeccCCCchhhCChh-hccccceeEEEecCCccCC
Confidence 777777888888888788888888888888888888885 5888888 88888888864
No 6
>KOG0472|consensus
Probab=100.00 E-value=5.8e-41 Score=328.38 Aligned_cols=479 Identities=25% Similarity=0.365 Sum_probs=375.9
Q ss_pred cccEEEcCCCCccccCcccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccC
Q psy16110 165 PIRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNL 244 (719)
Q Consensus 165 ~L~~L~Ls~n~i~~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 244 (719)
.++.+++++|.++.+.+.. ..+..|.+|++++|++... +.+++.+..++.++.++|++..+++. ++.+.+|
T Consensus 46 ~l~~lils~N~l~~l~~dl--~nL~~l~vl~~~~n~l~~l------p~aig~l~~l~~l~vs~n~ls~lp~~-i~s~~~l 116 (565)
T KOG0472|consen 46 DLQKLILSHNDLEVLREDL--KNLACLTVLNVHDNKLSQL------PAAIGELEALKSLNVSHNKLSELPEQ-IGSLISL 116 (565)
T ss_pred chhhhhhccCchhhccHhh--hcccceeEEEeccchhhhC------CHHHHHHHHHHHhhcccchHhhccHH-Hhhhhhh
Confidence 4889999999998877766 4678899999999998753 24778889999999999999988874 6778999
Q ss_pred cEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCcEEEcCCC
Q psy16110 245 LELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYN 324 (719)
Q Consensus 245 ~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 324 (719)
+.|+.++|.+.++++ .++.+..|..++..+|++++++ .++..+.+|..+++.+|.+...++..+. ++.|++||...|
T Consensus 117 ~~l~~s~n~~~el~~-~i~~~~~l~dl~~~~N~i~slp-~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N 193 (565)
T KOG0472|consen 117 VKLDCSSNELKELPD-SIGRLLDLEDLDATNNQISSLP-EDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSN 193 (565)
T ss_pred hhhhccccceeecCc-hHHHHhhhhhhhccccccccCc-hHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchh
Confidence 999999999999988 5888899999999999999885 5577888999999999999988887666 999999999999
Q ss_pred CCCCcCCCccccccccCCCCCCEEeCCCCCCCccccccccCcccccccccccCCCccEEECCCCCCcCcCC--cchhccC
Q psy16110 325 RLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLES--TGLEDTL 402 (719)
Q Consensus 325 ~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~--~~~~~~L 402 (719)
-++.+++ .++.+.+|+.|++.+|+|..++ .|..|..|++++++.|.+..+|+ ...++++
T Consensus 194 ~L~tlP~------~lg~l~~L~~LyL~~Nki~~lP-------------ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l 254 (565)
T KOG0472|consen 194 LLETLPP------ELGGLESLELLYLRRNKIRFLP-------------EFPGCSLLKELHVGENQIEMLPAEHLKHLNSL 254 (565)
T ss_pred hhhcCCh------hhcchhhhHHHHhhhcccccCC-------------CCCccHHHHHHHhcccHHHhhHHHHhcccccc
Confidence 9999988 4788899999999999987655 35567888999999998888876 3456788
Q ss_pred CEEEccCCcccccccCccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCC--CccEEE--
Q psy16110 403 DNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLK--KLEVLD-- 478 (719)
Q Consensus 403 ~~L~l~~n~l~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~--~L~~L~-- 478 (719)
..|++++|+++++|+.+.-+.+|+.||+|+|.|++.+ ..++++ .|+.|.+.+| .+..+-.+.++.-+ -|++|.
T Consensus 255 ~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is~Lp-~sLgnl-hL~~L~leGN-PlrTiRr~ii~~gT~~vLKyLrs~ 331 (565)
T KOG0472|consen 255 LVLDLRDNKLKEVPDEICLLRSLERLDLSNNDISSLP-YSLGNL-HLKFLALEGN-PLRTIRREIISKGTQEVLKYLRSK 331 (565)
T ss_pred eeeeccccccccCchHHHHhhhhhhhcccCCccccCC-cccccc-eeeehhhcCC-chHHHHHHHHcccHHHHHHHHHHh
Confidence 8999999999999988888888999999999998885 457888 8899999998 44443322221110 011110
Q ss_pred -----cCCCC---CCC--CCc---hhhcCCCCccEEEccCCcCCCCChhhhcCCC--CCCEEeCCCCccccccCCccCCC
Q psy16110 479 -----LAATG---LKS--IPQ---YQFDELLNLKYLCLAHNHLTEIPEMMFKNLL--NLTYLDLSNNNIVNLRVGSLYGL 543 (719)
Q Consensus 479 -----ls~n~---l~~--~~~---~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~--~L~~L~Ls~n~i~~~~~~~l~~l 543 (719)
++... .+. .+. .......+.+.|++++-+++.+|.+.|.... -....+++.|++..+ |..+..+
T Consensus 332 ~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~el-Pk~L~~l 410 (565)
T KOG0472|consen 332 IKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCEL-PKRLVEL 410 (565)
T ss_pred hccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhh-hhhhHHH
Confidence 11110 000 011 1223356788899999999999998887543 377899999998876 5555555
Q ss_pred CCCC-EEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCC
Q psy16110 544 PSMK-RLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSY 622 (719)
Q Consensus 544 ~~L~-~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 622 (719)
..+. .+.+++|.+. +++..+. .+++|..|+|++|.+..+ |..++.+..|++|+++.|+|..+|.. +..+..
T Consensus 411 kelvT~l~lsnn~is-fv~~~l~-----~l~kLt~L~L~NN~Ln~L-P~e~~~lv~Lq~LnlS~NrFr~lP~~-~y~lq~ 482 (565)
T KOG0472|consen 411 KELVTDLVLSNNKIS-FVPLELS-----QLQKLTFLDLSNNLLNDL-PEEMGSLVRLQTLNLSFNRFRMLPEC-LYELQT 482 (565)
T ss_pred HHHHHHHHhhcCccc-cchHHHH-----hhhcceeeecccchhhhc-chhhhhhhhhheecccccccccchHH-HhhHHH
Confidence 5444 4455555554 4443333 459999999999988877 77888888899999999999988854 566777
Q ss_pred CCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCcCCCcChHh
Q psy16110 623 LQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERL 688 (719)
Q Consensus 623 L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~ 688 (719)
++.+-.++|++..+++..+.++.+|..||+.+|.+..+||. ++++++|++|++++|+|+ .|++.
T Consensus 483 lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~-LgnmtnL~hLeL~gNpfr-~Pr~~ 546 (565)
T KOG0472|consen 483 LETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPI-LGNMTNLRHLELDGNPFR-QPRHQ 546 (565)
T ss_pred HHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChh-hccccceeEEEecCCccC-CCHHH
Confidence 88888888999999998899999999999999999999885 899999999999999998 66654
No 7
>KOG0618|consensus
Probab=100.00 E-value=1.2e-37 Score=334.85 Aligned_cols=466 Identities=25% Similarity=0.318 Sum_probs=214.2
Q ss_pred ccEEEcCCCCccccCcccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccCc
Q psy16110 166 IRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLL 245 (719)
Q Consensus 166 L~~L~Ls~n~i~~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 245 (719)
++.|+++.|.+...|-.+..+ .-+|+.|++++|.++. +| ..+..+++|+.|+++.|.|...+. ...++.+|+
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~-~v~L~~l~lsnn~~~~-fp-----~~it~l~~L~~ln~s~n~i~~vp~-s~~~~~~l~ 94 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEK-RVKLKSLDLSNNQISS-FP-----IQITLLSHLRQLNLSRNYIRSVPS-SCSNMRNLQ 94 (1081)
T ss_pred HHhhhccccccccCchHHhhh-eeeeEEeecccccccc-CC-----chhhhHHHHhhcccchhhHhhCch-hhhhhhcch
Confidence 444555555444433222221 1225555555554442 11 133344455555555555544442 234445555
Q ss_pred EEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEcc-------------------CCCCcccC
Q psy16110 246 ELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILR-------------------GNRLTTIE 306 (719)
Q Consensus 246 ~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls-------------------~n~i~~~~ 306 (719)
+|.|.+|.+...|. .+..+++|++|++++|.+..++ ..+..+..++.+..+ .|.+.+-.
T Consensus 95 ~lnL~~n~l~~lP~-~~~~lknl~~LdlS~N~f~~~P-l~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~ 172 (1081)
T KOG0618|consen 95 YLNLKNNRLQSLPA-SISELKNLQYLDLSFNHFGPIP-LVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSF 172 (1081)
T ss_pred hheeccchhhcCch-hHHhhhcccccccchhccCCCc-hhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccch
Confidence 55555555555544 3445555555555555544442 223344444444444 44444333
Q ss_pred cccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCCEEeCCCCCCCccccccccCcccccccccccCCCccEEECC
Q psy16110 307 GGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLN 386 (719)
Q Consensus 307 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~ 386 (719)
..++..++. .|+|.+|.+..+ .+..+.+|+.|....|++..+.. .-++|+.|+.+
T Consensus 173 ~~~i~~l~~--~ldLr~N~~~~~--------dls~~~~l~~l~c~rn~ls~l~~---------------~g~~l~~L~a~ 227 (1081)
T KOG0618|consen 173 LIDIYNLTH--QLDLRYNEMEVL--------DLSNLANLEVLHCERNQLSELEI---------------SGPSLTALYAD 227 (1081)
T ss_pred hcchhhhhe--eeecccchhhhh--------hhhhccchhhhhhhhcccceEEe---------------cCcchheeeec
Confidence 333333333 355555554421 12334445555555554443321 12345555555
Q ss_pred CCCCcCcCCcchhccCCEEEccCCcccccccCccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCC
Q psy16110 387 GNFLINLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVG 466 (719)
Q Consensus 387 ~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~ 466 (719)
+|.++.......+.+|++++++.|.++.++.+ +..+.+|+.++..+| .+..+|..
T Consensus 228 ~n~l~~~~~~p~p~nl~~~dis~n~l~~lp~w------------------------i~~~~nle~l~~n~N-~l~~lp~r 282 (1081)
T KOG0618|consen 228 HNPLTTLDVHPVPLNLQYLDISHNNLSNLPEW------------------------IGACANLEALNANHN-RLVALPLR 282 (1081)
T ss_pred cCcceeeccccccccceeeecchhhhhcchHH------------------------HHhcccceEecccch-hHHhhHHH
Confidence 55444333333344444444444444444444 444445555555444 33444433
Q ss_pred CCCCCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCCcCCCCChhhhcCCCC-CCEEeCCCCccccccCCccCCCCC
Q psy16110 467 GFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLN-LTYLDLSNNNIVNLRVGSLYGLPS 545 (719)
Q Consensus 467 ~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~Ls~n~i~~~~~~~l~~l~~ 545 (719)
. ...++|+.|.+.+|.+..+++ ..+....|++|+|..|.+..+|...|..... |+.|+.+.|++.......-..++.
T Consensus 283 i-~~~~~L~~l~~~~nel~yip~-~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~ 360 (1081)
T KOG0618|consen 283 I-SRITSLVSLSAAYNELEYIPP-FLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAA 360 (1081)
T ss_pred H-hhhhhHHHHHhhhhhhhhCCC-cccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHH
Confidence 2 223445555555555554443 2233445555555555555555544333332 444444544444432211223344
Q ss_pred CCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCE
Q psy16110 546 MKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQE 625 (719)
Q Consensus 546 L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 625 (719)
|+.|++.+|.+++--...+ .+..+|++|+|++|++.......+.++..|++|+||||+++.+|. .+.++..|++
T Consensus 361 Lq~LylanN~Ltd~c~p~l-----~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~-tva~~~~L~t 434 (1081)
T KOG0618|consen 361 LQELYLANNHLTDSCFPVL-----VNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLPD-TVANLGRLHT 434 (1081)
T ss_pred HHHHHHhcCcccccchhhh-----ccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhhH-HHHhhhhhHH
Confidence 5555555555543222222 123555555555555555544455555555555555555555553 2455555555
Q ss_pred EECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCC-cccCCCCCCCcEEECCCCcCCCcChHhhcCcccc-EEecCCC
Q psy16110 626 IDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAIS-ETCFFNSSQLQIINLSFNRLEKLPERLFNTFLYT-NYDMAPN 702 (719)
Q Consensus 626 L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~L~l~~N 702 (719)
|...+|.+...| .+..++.|+.+|++.|+++.+. +.... -++|++||+++|.-..+....|..+.++ .+++.=|
T Consensus 435 L~ahsN~l~~fP--e~~~l~qL~~lDlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 435 LRAHSNQLLSFP--ELAQLPQLKVLDLSCNNLSEVTLPEALP-SPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred HhhcCCceeech--hhhhcCcceEEecccchhhhhhhhhhCC-CcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 555555555554 2455555555555555555432 22211 1555666666554444444445555444 3333333
No 8
>KOG0618|consensus
Probab=100.00 E-value=8.2e-38 Score=336.01 Aligned_cols=487 Identities=28% Similarity=0.332 Sum_probs=397.4
Q ss_pred EEEcCCCCccccCcccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccCcEE
Q psy16110 168 RLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLEL 247 (719)
Q Consensus 168 ~L~Ls~n~i~~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 247 (719)
.+|.|..+++-||..++. . ..+..|+++.|.+-.. | .+...+..+|+.||+++|++...+. .+..+.+|+.|
T Consensus 2 ~vd~s~~~l~~ip~~i~~-~-~~~~~ln~~~N~~l~~-p----l~~~~~~v~L~~l~lsnn~~~~fp~-~it~l~~L~~l 73 (1081)
T KOG0618|consen 2 HVDASDEQLELIPEQILN-N-EALQILNLRRNSLLSR-P----LEFVEKRVKLKSLDLSNNQISSFPI-QITLLSHLRQL 73 (1081)
T ss_pred CcccccccCcccchhhcc-H-HHHHhhhccccccccC-c----hHHhhheeeeEEeeccccccccCCc-hhhhHHHHhhc
Confidence 468888899999999885 3 3499999999976542 1 2455667779999999999988776 46778999999
Q ss_pred ECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCcEEEcCCC-CC
Q psy16110 248 RMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYN-RL 326 (719)
Q Consensus 248 ~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n-~l 326 (719)
+++.|.|.++|. +..++.+|++|+|.+|.+..+ |..+..+.+|++|+++.|.+..++. .+..++.+..+..++| ++
T Consensus 74 n~s~n~i~~vp~-s~~~~~~l~~lnL~~n~l~~l-P~~~~~lknl~~LdlS~N~f~~~Pl-~i~~lt~~~~~~~s~N~~~ 150 (1081)
T KOG0618|consen 74 NLSRNYIRSVPS-SCSNMRNLQYLNLKNNRLQSL-PASISELKNLQYLDLSFNHFGPIPL-VIEVLTAEEELAASNNEKI 150 (1081)
T ss_pred ccchhhHhhCch-hhhhhhcchhheeccchhhcC-chhHHhhhcccccccchhccCCCch-hHHhhhHHHHHhhhcchhh
Confidence 999999999995 789999999999999998877 5779999999999999999988764 6788899999999999 22
Q ss_pred CCcCCCccccccccCCCCCCEEeCCCCCCCccccccccCcccccccccccCCCccEEECCCCCCcCcCCcchhccCCEEE
Q psy16110 327 NKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDTLDNLN 406 (719)
Q Consensus 327 ~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~~L~~L~ 406 (719)
..+ +... ++.+++..|.+. +.++.....+.. .|+|.+|.+. .-....+..|+.|.
T Consensus 151 ~~l----------g~~~-ik~~~l~~n~l~-----------~~~~~~i~~l~~--~ldLr~N~~~-~~dls~~~~l~~l~ 205 (1081)
T KOG0618|consen 151 QRL----------GQTS-IKKLDLRLNVLG-----------GSFLIDIYNLTH--QLDLRYNEME-VLDLSNLANLEVLH 205 (1081)
T ss_pred hhh----------cccc-chhhhhhhhhcc-----------cchhcchhhhhe--eeecccchhh-hhhhhhccchhhhh
Confidence 222 2222 677777777653 223333333444 6999999988 44456667899999
Q ss_pred ccCCcccccccCccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCCCCCCC
Q psy16110 407 VRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKS 486 (719)
Q Consensus 407 l~~n~l~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n~l~~ 486 (719)
...|++..+. ...++|+.|+.++|.++..... .--.+|++++++.| .+..+| +....+.+|+.++..+|.+..
T Consensus 206 c~rn~ls~l~---~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n-~l~~lp-~wi~~~~nle~l~~n~N~l~~ 278 (1081)
T KOG0618|consen 206 CERNQLSELE---ISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHN-NLSNLP-EWIGACANLEALNANHNRLVA 278 (1081)
T ss_pred hhhcccceEE---ecCcchheeeeccCcceeeccc--cccccceeeecchh-hhhcch-HHHHhcccceEecccchhHHh
Confidence 9999888764 3457899999999999865432 23468999999999 899999 778899999999999999988
Q ss_pred CCchhhcCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCC-CCEEEccCCcCCcccCCcCC
Q psy16110 487 IPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPS-MKRLDLSFNKLTTFKGDYFN 565 (719)
Q Consensus 487 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~-L~~L~L~~n~l~~~~~~~~~ 565 (719)
++.. +....+|+.|.+..|.+..+++. ....++|++|+|..|++....+..+..... |+.|+.+.|++...+...
T Consensus 279 lp~r-i~~~~~L~~l~~~~nel~yip~~-le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~-- 354 (1081)
T KOG0618|consen 279 LPLR-ISRITSLVSLSAAYNELEYIPPF-LEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYE-- 354 (1081)
T ss_pred hHHH-HhhhhhHHHHHhhhhhhhhCCCc-ccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccccccccc--
Confidence 8864 45678999999999999999874 466899999999999999887766665554 889999999988766221
Q ss_pred CCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCC
Q psy16110 566 TKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLP 645 (719)
Q Consensus 566 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~ 645 (719)
. ...+.|+.|++-+|.+++..-..+.+.++|+.|+|++|++..+|...+.+++.|+.|+||||+++.++. .+.+++
T Consensus 355 e---~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~-tva~~~ 430 (1081)
T KOG0618|consen 355 E---NNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLPD-TVANLG 430 (1081)
T ss_pred c---hhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhhH-HHHhhh
Confidence 1 235789999999999998877789999999999999999999999999999999999999999999985 788999
Q ss_pred CCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCcCCCcChHhhcCcccc-EEecCCCceeee
Q psy16110 646 RLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERLFNTFLYT-NYDMAPNLVFQS 707 (719)
Q Consensus 646 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~L~l~~N~l~~~ 707 (719)
.|+.|...+|++...|. +..+++|+.+|+|.|.++.+.-..-..-+.| +||++||+....
T Consensus 431 ~L~tL~ahsN~l~~fPe--~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~ 491 (1081)
T KOG0618|consen 431 RLHTLRAHSNQLLSFPE--LAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVF 491 (1081)
T ss_pred hhHHHhhcCCceeechh--hhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccccc
Confidence 99999999999998883 7889999999999999985432211222789 999999996544
No 9
>KOG4237|consensus
Probab=99.97 E-value=1.2e-33 Score=277.04 Aligned_cols=171 Identities=26% Similarity=0.451 Sum_probs=101.7
Q ss_pred CCCCcCCCCCcccccccCCCCcccccccccccCCCCCCCCCCCCchhhhhcccccCCcCccccccCCCCcccEEEcCCCC
Q psy16110 96 PCDTMIDDFPYPCRCKKMSESQLAMDCDNVAFPNGEYPTLPYGLNLVTFSQRWVGHQILPMQIFSSSDIPIRRLDFSGNA 175 (719)
Q Consensus 96 ~c~~~~~~~~~~C~c~~~~~~~~~~~c~~~~l~~~~~~~~p~~~~~~~l~~~~~~~~~lp~~~~~~~~~~L~~L~Ls~n~ 175 (719)
.|......||.+|+|.... +..|+|++.+++ .||..+ | ...+.++|..|.
T Consensus 29 ~C~~~~~~CP~pC~Cs~~~--g~~VdCr~~GL~-----eVP~~L---------------P--------~~tveirLdqN~ 78 (498)
T KOG4237|consen 29 TCAHSASACPAPCTCSDVE--GGIVDCRGKGLT-----EVPANL---------------P--------PETVEIRLDQNQ 78 (498)
T ss_pred hhhhccccCCCCcccCCCC--CceEEccCCCcc-----cCcccC---------------C--------CcceEEEeccCC
Confidence 6776667889999998532 689999987776 444432 2 247889999999
Q ss_pred ccccCcccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccCcEEECCCCcCC
Q psy16110 176 LRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFT 255 (719)
Q Consensus 176 i~~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 255 (719)
|+.||+.+|. .+++||.||||+|.|+. |.+.+|.++++|..|-+.+ +|+|+
T Consensus 79 I~~iP~~aF~-~l~~LRrLdLS~N~Is~-----I~p~AF~GL~~l~~Lvlyg-----------------------~NkI~ 129 (498)
T KOG4237|consen 79 ISSIPPGAFK-TLHRLRRLDLSKNNISF-----IAPDAFKGLASLLSLVLYG-----------------------NNKIT 129 (498)
T ss_pred cccCChhhcc-chhhhceecccccchhh-----cChHhhhhhHhhhHHHhhc-----------------------CCchh
Confidence 9999998774 44555555555555543 3344444444444444433 14444
Q ss_pred cCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCcEEEcCCCC
Q psy16110 256 SIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNR 325 (719)
Q Consensus 256 ~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 325 (719)
.+|..+|+++..|+.|.+.-|++.-+..++|..+++|..|.+-+|.+..+..++|..+..++.+++..|.
T Consensus 130 ~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np 199 (498)
T KOG4237|consen 130 DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNP 199 (498)
T ss_pred hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCc
Confidence 4444444455555555555555544444555555555555555555555555555555555555555554
No 10
>KOG0444|consensus
Probab=99.96 E-value=3e-32 Score=280.24 Aligned_cols=357 Identities=27% Similarity=0.374 Sum_probs=198.1
Q ss_pred cCEEEccCCCCc-ccCcccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCCEEeCCCCCCCccccccccCccccc
Q psy16110 292 LERIILRGNRLT-TIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITI 370 (719)
Q Consensus 292 L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~i~~~~f~~~~~~~ 370 (719)
.+-.|+++|.++ +-.|.....+++++.|.|...++..++. .++.+.+|++|.+++|++..+..
T Consensus 9 VrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~~vPe------EL~~lqkLEHLs~~HN~L~~vhG---------- 72 (1255)
T KOG0444|consen 9 VRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLEQVPE------ELSRLQKLEHLSMAHNQLISVHG---------- 72 (1255)
T ss_pred eecccccCCcCCCCcCchhHHHhhheeEEEechhhhhhChH------HHHHHhhhhhhhhhhhhhHhhhh----------
Confidence 444555555555 2234445555555555555555555554 34455555555555555543321
Q ss_pred ccccccCCCccEEECCCCCCcC--cCC-cchhccCCEEEccCCcccccccCccCCCCccEEEccCCCCCCcCcccccCCC
Q psy16110 371 FSFFQDFQKLKSLDLNGNFLIN--LES-TGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVP 447 (719)
Q Consensus 371 ~~~l~~~~~L~~L~L~~n~l~~--~~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 447 (719)
.++.++.|+.+.+..|++.. +|. +..+..|+.|++++|+++..|...-.-+++-.|+||+|+|..|+...|.++.
T Consensus 73 --ELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLt 150 (1255)
T KOG0444|consen 73 --ELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLT 150 (1255)
T ss_pred --hhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCCchHHHhhH
Confidence 23345555555555554432 222 2223344444455555544444443445556666666666666666666666
Q ss_pred cCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCCc--CCCCChhhhcCCCCCCEE
Q psy16110 448 TLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNH--LTEIPEMMFKNLLNLTYL 525 (719)
Q Consensus 448 ~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~--l~~~~~~~~~~l~~L~~L 525 (719)
.|-.|+|++| .+..+|+. ...+..|++|++++|.+.......+..+++|+.|.+++.+ +..+|.. +..+.+|..+
T Consensus 151 DLLfLDLS~N-rLe~LPPQ-~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Pts-ld~l~NL~dv 227 (1255)
T KOG0444|consen 151 DLLFLDLSNN-RLEMLPPQ-IRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTS-LDDLHNLRDV 227 (1255)
T ss_pred hHhhhccccc-hhhhcCHH-HHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCc-hhhhhhhhhc
Confidence 6666666666 66666654 3455666666666665554444444455666666666653 2244432 4556666666
Q ss_pred eCCCCccccccCCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcC
Q psy16110 526 DLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLA 605 (719)
Q Consensus 526 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 605 (719)
|+|.|.+..+ |..+..+++|+.|+|++|+++.+.... ....+|+.|++|.|+++.. |.++..++.|+.|++.
T Consensus 228 DlS~N~Lp~v-Pecly~l~~LrrLNLS~N~iteL~~~~------~~W~~lEtLNlSrNQLt~L-P~avcKL~kL~kLy~n 299 (1255)
T KOG0444|consen 228 DLSENNLPIV-PECLYKLRNLRRLNLSGNKITELNMTE------GEWENLETLNLSRNQLTVL-PDAVCKLTKLTKLYAN 299 (1255)
T ss_pred cccccCCCcc-hHHHhhhhhhheeccCcCceeeeeccH------HHHhhhhhhccccchhccc-hHHHhhhHHHHHHHhc
Confidence 6666665544 556666666666666666666443221 1235566666666666654 5566666666666666
Q ss_pred CCCCC--CcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCc
Q psy16110 606 FNKFN--YFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNR 680 (719)
Q Consensus 606 ~n~l~--~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 680 (719)
+|+++ ++|.. ++.+.+|+++..++|.+.-.+. .++.|++|+.|.|+.|++..++. ++--++.|+.||+..|+
T Consensus 300 ~NkL~FeGiPSG-IGKL~~Levf~aanN~LElVPE-glcRC~kL~kL~L~~NrLiTLPe-aIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 300 NNKLTFEGIPSG-IGKLIQLEVFHAANNKLELVPE-GLCRCVKLQKLKLDHNRLITLPE-AIHLLPDLKVLDLRENP 373 (1255)
T ss_pred cCcccccCCccc-hhhhhhhHHHHhhccccccCch-hhhhhHHHHHhcccccceeechh-hhhhcCCcceeeccCCc
Confidence 66544 45543 5666666666666666554443 56666666666666666665543 34455666666666663
No 11
>KOG0444|consensus
Probab=99.95 E-value=6.4e-31 Score=270.51 Aligned_cols=364 Identities=23% Similarity=0.331 Sum_probs=198.9
Q ss_pred CccCcEEECCCCcCC--cCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCcE
Q psy16110 241 CDNLLELRMDHNRFT--SIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHI 318 (719)
Q Consensus 241 l~~L~~L~L~~n~l~--~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 318 (719)
++-.+-.|+++|.++ .+|. ....++.++.|.|...++..+ |+.++.+.+|++|.+++|++..+. +.+..++.|+.
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~-~v~qMt~~~WLkLnrt~L~~v-PeEL~~lqkLEHLs~~HN~L~~vh-GELs~Lp~LRs 82 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPH-DVEQMTQMTWLKLNRTKLEQV-PEELSRLQKLEHLSMAHNQLISVH-GELSDLPRLRS 82 (1255)
T ss_pred cceeecccccCCcCCCCcCch-hHHHhhheeEEEechhhhhhC-hHHHHHHhhhhhhhhhhhhhHhhh-hhhccchhhHH
Confidence 344556677777776 3554 466677777777777777666 455677777777777777776664 34666777777
Q ss_pred EEcCCCCCCC--cCCCccccccccCCCCCCEEeCCCCCCCccccccccCcccccccccccCCCccEEECCCCCCcCcCC-
Q psy16110 319 LNLGYNRLNK--LNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLES- 395 (719)
Q Consensus 319 L~L~~n~l~~--~~~~~~~~~~l~~l~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~- 395 (719)
+++..|++.. ++.+ +-.+..|+.|||++|+++.++ ..+..-+++-.|+||+|+|..+|.
T Consensus 83 v~~R~N~LKnsGiP~d------iF~l~dLt~lDLShNqL~EvP------------~~LE~AKn~iVLNLS~N~IetIPn~ 144 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTD------IFRLKDLTILDLSHNQLREVP------------TNLEYAKNSIVLNLSYNNIETIPNS 144 (1255)
T ss_pred HhhhccccccCCCCch------hcccccceeeecchhhhhhcc------------hhhhhhcCcEEEEcccCccccCCch
Confidence 7777776643 4443 234566677777777665443 234445566666666666666654
Q ss_pred -cchhccCCEEEccCCcccccccCccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCC-CCCCCCCCCCCCCC
Q psy16110 396 -TGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAH-LSSLPVGGFDPLKK 473 (719)
Q Consensus 396 -~~~~~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~-l~~l~~~~~~~l~~ 473 (719)
+..+..|-.|++++|++..+|+.+-.+..|++|+|++|.+....-..+..+++|+.|.+++... +..+|.. +..+.+
T Consensus 145 lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Pts-ld~l~N 223 (1255)
T KOG0444|consen 145 LFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTS-LDDLHN 223 (1255)
T ss_pred HHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCc-hhhhhh
Confidence 2333455566666666666666555566666666666655543333334445555555555422 2233322 344555
Q ss_pred ccEEEcCCCCCCCCCchhhcCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccC
Q psy16110 474 LEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSF 553 (719)
Q Consensus 474 L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~ 553 (719)
|..+|+|.|.+..+|. .+-.+++|+.|+|++|+|+++... ...-.+|++|++|.|+++.. |.++.++++|+.|.+.+
T Consensus 224 L~dvDlS~N~Lp~vPe-cly~l~~LrrLNLS~N~iteL~~~-~~~W~~lEtLNlSrNQLt~L-P~avcKL~kL~kLy~n~ 300 (1255)
T KOG0444|consen 224 LRDVDLSENNLPIVPE-CLYKLRNLRRLNLSGNKITELNMT-EGEWENLETLNLSRNQLTVL-PDAVCKLTKLTKLYANN 300 (1255)
T ss_pred hhhccccccCCCcchH-HHhhhhhhheeccCcCceeeeecc-HHHHhhhhhhccccchhccc-hHHHhhhHHHHHHHhcc
Confidence 5555555555555443 344555555555555555544332 12224555555555555544 45555555555555555
Q ss_pred CcCC--cccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCC
Q psy16110 554 NKLT--TFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNN 631 (719)
Q Consensus 554 n~l~--~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n 631 (719)
|+++ ++|.. ++.+..|+++..++|.+.-+ |+.+.+|..|+.|.|++|++..+|. +++-++.|++||++.|
T Consensus 301 NkL~FeGiPSG------IGKL~~Levf~aanN~LElV-PEglcRC~kL~kL~L~~NrLiTLPe-aIHlL~~l~vLDlreN 372 (1255)
T KOG0444|consen 301 NKLTFEGIPSG------IGKLIQLEVFHAANNKLELV-PEGLCRCVKLQKLKLDHNRLITLPE-AIHLLPDLKVLDLREN 372 (1255)
T ss_pred CcccccCCccc------hhhhhhhHHHHhhccccccC-chhhhhhHHHHHhcccccceeechh-hhhhcCCcceeeccCC
Confidence 5543 11111 12234455555554444332 4455555555555555555544443 2444555555555555
Q ss_pred CCcccC
Q psy16110 632 QLKTID 637 (719)
Q Consensus 632 ~l~~~~ 637 (719)
.-...+
T Consensus 373 pnLVMP 378 (1255)
T KOG0444|consen 373 PNLVMP 378 (1255)
T ss_pred cCccCC
Confidence 433333
No 12
>KOG4237|consensus
Probab=99.94 E-value=2.3e-29 Score=247.06 Aligned_cols=416 Identities=23% Similarity=0.309 Sum_probs=239.6
Q ss_pred cCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccC-CCCcccCcccccCcccCcEEEc
Q psy16110 243 NLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRG-NRLTTIEGGAFNGLAKIHILNL 321 (719)
Q Consensus 243 ~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~-n~i~~~~~~~~~~l~~L~~L~L 321 (719)
.-..++|..|+|+.||+.+|+.+++|+.||||+|+|+.|.+++|.++.+|..|-+-+ |+|+.++.++|+++..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 345566666666666666666666666666666666666666666666665554443 6666666666666666666666
Q ss_pred CCCCCCCcCCCccccccccCCCCCCEEeCCCCCCCccccccccCcccccccccccCCCccEEECCCCCCcCcCCcchhcc
Q psy16110 322 GYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDT 401 (719)
Q Consensus 322 ~~n~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~~ 401 (719)
.-|++..+..+ +|..++++..|.+..|.+..+....|.+ +..++.+.+..|.+...=...+.
T Consensus 148 Nan~i~Cir~~-----al~dL~~l~lLslyDn~~q~i~~~tf~~-----------l~~i~tlhlA~np~icdCnL~wl-- 209 (498)
T KOG4237|consen 148 NANHINCIRQD-----ALRDLPSLSLLSLYDNKIQSICKGTFQG-----------LAAIKTLHLAQNPFICDCNLPWL-- 209 (498)
T ss_pred ChhhhcchhHH-----HHHHhhhcchhcccchhhhhhccccccc-----------hhccchHhhhcCccccccccchh--
Confidence 66666665555 3445666666666666665555444433 44556666655543211100000
Q ss_pred CCEEEccCCcccccccCccCCCCccEEEccCCCCCCcCcccccCC-CcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcC
Q psy16110 402 LDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNV-PTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLA 480 (719)
Q Consensus 402 L~~L~l~~n~l~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls 480 (719)
.. ++..+.+ ............+.+.++..+.+..|... .++..=-.+.+......|...|..+++|+.|+++
T Consensus 210 -a~-~~a~~~i-----etsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnls 282 (498)
T KOG4237|consen 210 -AD-DLAMNPI-----ETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLS 282 (498)
T ss_pred -hh-HHhhchh-----hcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccC
Confidence 00 0000000 00111112222333444444444444321 1111111122224555666678889999999999
Q ss_pred CCCCCCCCchhhcCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCcCCcc-
Q psy16110 481 ATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTF- 559 (719)
Q Consensus 481 ~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~- 559 (719)
+|+++.|...+|.+...++.|.|..|++..+....|.++..|+.|+|.+|+|+.+.|.+|..+.+|.+|++-.|++.--
T Consensus 283 nN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC 362 (498)
T KOG4237|consen 283 NNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNC 362 (498)
T ss_pred CCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCcc
Confidence 9999999989999999999999999999999888999999999999999999999999999999999999988875410
Q ss_pred ----cCCcCCCC------CCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCC-EEEC
Q psy16110 560 ----KGDYFNTK------SKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQ-EIDL 628 (719)
Q Consensus 560 ----~~~~~~~~------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~-~L~L 628 (719)
-+++.... ....-..++.+++++..+...-- ..=++.. + ..-+ ..-..++-+. +...
T Consensus 363 ~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c------~~~ee~~---~--~~s~-~cP~~c~c~~tVvRc 430 (498)
T KOG4237|consen 363 RLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRC------GGPEELG---C--LTSS-PCPPPCTCLDTVVRC 430 (498)
T ss_pred chHHHHHHHhhCCCCCCCCCCCCchhccccchhcccccccc------CCccccC---C--CCCC-CCCCCcchhhhhHhh
Confidence 00011000 00011234444444433322100 0000000 0 0000 0001223332 3344
Q ss_pred CCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCcCCCcChHhhcCcccc-EEecCCC
Q psy16110 629 SNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERLFNTFLYT-NYDMAPN 702 (719)
Q Consensus 629 s~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~L~l~~N 702 (719)
|+..+..+++. + ...-.++++.+|.++.++.+ .+.+| .+|+|+|+++.+....|.++++| .+.+++|
T Consensus 431 Snk~lk~lp~~-i--P~d~telyl~gn~~~~vp~~---~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 431 SNKLLKLLPRG-I--PVDVTELYLDGNAITSVPDE---LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred cccchhhcCCC-C--CchhHHHhcccchhcccCHH---HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 44444444431 1 12456778888888888776 34566 88888888888888888888888 8887776
No 13
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.88 E-value=4.5e-21 Score=231.27 Aligned_cols=336 Identities=24% Similarity=0.280 Sum_probs=226.2
Q ss_pred CCCcccCCCccCEEEccCCCC------cccCcccccCc-ccCcEEEcCCCCCCCcCCCccccccccCCCCCCEEeCCCCC
Q psy16110 282 KADSFLSQRWLERIILRGNRL------TTIEGGAFNGL-AKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNR 354 (719)
Q Consensus 282 ~~~~~~~l~~L~~L~Ls~n~i------~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~ 354 (719)
...+|.++.+|+.|.+..+.. ....+..|..+ .+|+.|++.++++..++.. + ...+|+.|++.+++
T Consensus 550 ~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~------f-~~~~L~~L~L~~s~ 622 (1153)
T PLN03210 550 HENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSN------F-RPENLVKLQMQGSK 622 (1153)
T ss_pred cHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCCCc------C-CccCCcEEECcCcc
Confidence 345567777777777755432 11223445444 3588888888877777652 2 35678888888877
Q ss_pred CCccccccccCcccccccccccCCCccEEECCCC-CCcCcCCcchhccCCEEEccCCc-ccccccCccCCCCccEEEccC
Q psy16110 355 LNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGN-FLINLESTGLEDTLDNLNVRDNQ-ITTLSSSALNYKLLTKLDLSH 432 (719)
Q Consensus 355 l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~~n-~l~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~~~L~~L~Ls~ 432 (719)
+..+. ..+..+++|+.|+++++ .+..+|.....++|+.|++++|. +..++..+..+++|+.|++++
T Consensus 623 l~~L~------------~~~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~ 690 (1153)
T PLN03210 623 LEKLW------------DGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSR 690 (1153)
T ss_pred ccccc------------cccccCCCCCEEECCCCCCcCcCCccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCC
Confidence 75443 23445778888888776 45666666667788888888764 555665555678888888888
Q ss_pred CC-CCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCCcCC--
Q psy16110 433 NN-LKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLT-- 509 (719)
Q Consensus 433 n~-l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~-- 509 (719)
|. +..++. .+ ++++|+.|++++|..++.+|.. ..+|+.|++++|.+..+|.. ..+++|++|.+.++...
T Consensus 691 c~~L~~Lp~-~i-~l~sL~~L~Lsgc~~L~~~p~~----~~nL~~L~L~~n~i~~lP~~--~~l~~L~~L~l~~~~~~~l 762 (1153)
T PLN03210 691 CENLEILPT-GI-NLKSLYRLNLSGCSRLKSFPDI----STNISWLDLDETAIEEFPSN--LRLENLDELILCEMKSEKL 762 (1153)
T ss_pred CCCcCccCC-cC-CCCCCCEEeCCCCCCccccccc----cCCcCeeecCCCcccccccc--ccccccccccccccchhhc
Confidence 64 444433 22 6788888888888666666532 46788888888888777653 24677777777764322
Q ss_pred -----CCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCc-CCcccCCcCCCCCCCCCCCCcEEECcCC
Q psy16110 510 -----EIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNK-LTTFKGDYFNTKSKPNTSSLEELNLNNN 583 (719)
Q Consensus 510 -----~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~~~~~~l~~L~~L~Ls~n 583 (719)
.+.+..+...++|++|++++|......|..+.++++|+.|++++|. +..+|... .+++|+.|++++|
T Consensus 763 ~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-------~L~sL~~L~Ls~c 835 (1153)
T PLN03210 763 WERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-------NLESLESLDLSGC 835 (1153)
T ss_pred cccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-------CccccCEEECCCC
Confidence 2222223345688888888887666667788888888888888863 55544332 3578888888887
Q ss_pred CCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCC-CCcccCcccCCCCCCCCEEeCCCCc
Q psy16110 584 ELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNN-QLKTIDDYDYGYLPRLRKLNLNNNN 656 (719)
Q Consensus 584 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n-~l~~~~~~~l~~l~~L~~L~Ls~N~ 656 (719)
.....+|.. .++|++|+|++|.++.+|.. +..+++|+.|++++| ++..++. .+..+++|+.+++++|.
T Consensus 836 ~~L~~~p~~---~~nL~~L~Ls~n~i~~iP~s-i~~l~~L~~L~L~~C~~L~~l~~-~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 836 SRLRTFPDI---STNISDLNLSRTGIEEVPWW-IEKFSNLSFLDMNGCNNLQRVSL-NISKLKHLETVDFSDCG 904 (1153)
T ss_pred Ccccccccc---ccccCEeECCCCCCccChHH-HhcCCCCCEEECCCCCCcCccCc-ccccccCCCeeecCCCc
Confidence 654444432 36788888888888887754 678888888888884 5555554 56677888888888774
No 14
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.88 E-value=2.3e-21 Score=233.82 Aligned_cols=343 Identities=22% Similarity=0.249 Sum_probs=213.0
Q ss_pred cccCCCCCCEEeCCCCCCCccccccccCcccccccccccC-CCccEEECCCCCCcCcCCcchhccCCEEEccCCcccccc
Q psy16110 338 AFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDF-QKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLS 416 (719)
Q Consensus 338 ~l~~l~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~-~~L~~L~L~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~ 416 (719)
+|.++++|+.|.+..+...... .....+|..+..+ .+|+.|.+.++.+..+|....+.+|++|++.++.+..++
T Consensus 553 aF~~m~~L~~L~~~~~~~~~~~-----~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~f~~~~L~~L~L~~s~l~~L~ 627 (1153)
T PLN03210 553 AFKGMRNLLFLKFYTKKWDQKK-----EVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLW 627 (1153)
T ss_pred HHhcCccccEEEEecccccccc-----cceeecCcchhhcCcccEEEEecCCCCCCCCCcCCccCCcEEECcCccccccc
Confidence 4556666666666554322100 0011233444444 357777777777777776445567777777777777776
Q ss_pred cCccCCCCccEEEccCCC-CCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCCC-CCCCCCchhhcC
Q psy16110 417 SSALNYKLLTKLDLSHNN-LKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAAT-GLKSIPQYQFDE 494 (719)
Q Consensus 417 ~~~~~~~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n-~l~~~~~~~~~~ 494 (719)
.....+++|+.|+++++. +..++ .++.+++|++|++++|..+..+|.. +..+++|+.|++++| .+..++... +
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip--~ls~l~~Le~L~L~~c~~L~~lp~s-i~~L~~L~~L~L~~c~~L~~Lp~~i--~ 702 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIP--DLSMATNLETLKLSDCSSLVELPSS-IQYLNKLEDLDMSRCENLEILPTGI--N 702 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCC--ccccCCcccEEEecCCCCccccchh-hhccCCCCEEeCCCCCCcCccCCcC--C
Confidence 666567778888887764 33333 2566777888888777667777654 567777888888776 455555432 5
Q ss_pred CCCccEEEccCCc-CCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCcCCcccCCcCC--CCCCCC
Q psy16110 495 LLNLKYLCLAHNH-LTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFN--TKSKPN 571 (719)
Q Consensus 495 ~~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~--~~~~~~ 571 (719)
+++|++|++++|. +..++. ...+|++|++++|.+..+ |..+ .+++|++|.+.++....+...... ......
T Consensus 703 l~sL~~L~Lsgc~~L~~~p~----~~~nL~~L~L~~n~i~~l-P~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~ 776 (1153)
T PLN03210 703 LKSLYRLNLSGCSRLKSFPD----ISTNISWLDLDETAIEEF-PSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTML 776 (1153)
T ss_pred CCCCCEEeCCCCCCcccccc----ccCCcCeeecCCCccccc-cccc-cccccccccccccchhhccccccccchhhhhc
Confidence 6777788887773 333332 235677788887777655 3322 567777777766443222111100 000112
Q ss_pred CCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCC-CCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEE
Q psy16110 572 TSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFN-KFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKL 650 (719)
Q Consensus 572 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L 650 (719)
.++|+.|++++|.....+|..++.+++|+.|++++| .+..+|... ++++|+.|++++|......+. ..++|++|
T Consensus 777 ~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~--~L~sL~~L~Ls~c~~L~~~p~---~~~nL~~L 851 (1153)
T PLN03210 777 SPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI--NLESLESLDLSGCSRLRTFPD---ISTNISDL 851 (1153)
T ss_pred cccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC--CccccCEEECCCCCccccccc---cccccCEe
Confidence 367788888887766666777778888888888776 455666542 577788888887644322221 23567788
Q ss_pred eCCCCcCCCCCcccCCCCCCCcEEECCCC-cCCCcChHhhcCcccc-EEecCCCc
Q psy16110 651 NLNNNNIDAISETCFFNSSQLQIINLSFN-RLEKLPERLFNTFLYT-NYDMAPNL 703 (719)
Q Consensus 651 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~i~~~~~~~l~~L-~L~l~~N~ 703 (719)
+|++|.++.++. .+..+++|++|++++| +++.+|.. ...+++| .+++++|+
T Consensus 852 ~Ls~n~i~~iP~-si~~l~~L~~L~L~~C~~L~~l~~~-~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 852 NLSRTGIEEVPW-WIEKFSNLSFLDMNGCNNLQRVSLN-ISKLKHLETVDFSDCG 904 (1153)
T ss_pred ECCCCCCccChH-HHhcCCCCCEEECCCCCCcCccCcc-cccccCCCeeecCCCc
Confidence 888888776654 4677778888888774 67776654 3456677 77777665
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=8.3e-22 Score=220.49 Aligned_cols=224 Identities=28% Similarity=0.295 Sum_probs=106.8
Q ss_pred CCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCCCccEEE
Q psy16110 423 KLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLC 502 (719)
Q Consensus 423 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~ 502 (719)
++|++|++++|+++.++. ..++|+.|++++| .+..+|.. ..+|+.|++++|+++.++. ..++|+.|+
T Consensus 242 ~~Lk~LdLs~N~LtsLP~----lp~sL~~L~Ls~N-~L~~Lp~l----p~~L~~L~Ls~N~Lt~LP~----~p~~L~~Ld 308 (788)
T PRK15387 242 PELRTLEVSGNQLTSLPV----LPPGLLELSIFSN-PLTHLPAL----PSGLCKLWIFGNQLTSLPV----LPPGLQELS 308 (788)
T ss_pred CCCcEEEecCCccCcccC----cccccceeeccCC-chhhhhhc----hhhcCEEECcCCccccccc----cccccceeE
Confidence 344444444444444421 1234444444444 33333321 1334444555554444432 123455555
Q ss_pred ccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcC
Q psy16110 503 LAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNN 582 (719)
Q Consensus 503 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~ 582 (719)
+++|+++.++.. ..+|+.|++++|+++.+. . ...+|+.|+|++|+++.++.. .++|+.|++++
T Consensus 309 LS~N~L~~Lp~l----p~~L~~L~Ls~N~L~~LP-~---lp~~Lq~LdLS~N~Ls~LP~l---------p~~L~~L~Ls~ 371 (788)
T PRK15387 309 VSDNQLASLPAL----PSELCKLWAYNNQLTSLP-T---LPSGLQELSVSDNQLASLPTL---------PSELYKLWAYN 371 (788)
T ss_pred CCCCccccCCCC----cccccccccccCcccccc-c---cccccceEecCCCccCCCCCC---------Ccccceehhhc
Confidence 555555544321 123445555555554432 1 113455555555555544321 13455555555
Q ss_pred CCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCc
Q psy16110 583 NELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISE 662 (719)
Q Consensus 583 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~ 662 (719)
|+++.+ |.. ..+|+.|++++|+++.+|.. .++|+.|++++|++++++. . ..+|+.|++++|+++.++.
T Consensus 372 N~L~~L-P~l---~~~L~~LdLs~N~Lt~LP~l----~s~L~~LdLS~N~LssIP~-l---~~~L~~L~Ls~NqLt~LP~ 439 (788)
T PRK15387 372 NRLTSL-PAL---PSGLKELIVSGNRLTSLPVL----PSELKELMVSGNRLTSLPM-L---PSGLLSLSVYRNQLTRLPE 439 (788)
T ss_pred cccccC-ccc---ccccceEEecCCcccCCCCc----ccCCCEEEccCCcCCCCCc-c---hhhhhhhhhccCcccccCh
Confidence 555543 221 23456666666666655532 2456666666666665543 1 2345666666666665543
Q ss_pred ccCCCCCCCcEEECCCCcCCCcChHhh
Q psy16110 663 TCFFNSSQLQIINLSFNRLEKLPERLF 689 (719)
Q Consensus 663 ~~~~~l~~L~~L~Ls~N~l~~i~~~~~ 689 (719)
.+.++++|+.|+|++|+|+......+
T Consensus 440 -sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 440 -SLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred -HHhhccCCCeEECCCCCCCchHHHHH
Confidence 35556666666666666664433333
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.87 E-value=1.3e-21 Score=218.98 Aligned_cols=262 Identities=26% Similarity=0.285 Sum_probs=139.1
Q ss_pred CCCEEECcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEcc
Q psy16110 219 NLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILR 298 (719)
Q Consensus 219 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 298 (719)
.-..|+++++.++.+|+.. . .+|+.|++++|+++.+|. .+++|++|++++|+++.++. ..++|+.|+++
T Consensus 202 ~~~~LdLs~~~LtsLP~~l-~--~~L~~L~L~~N~Lt~LP~----lp~~Lk~LdLs~N~LtsLP~----lp~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLTTLPDCL-P--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSLPV----LPPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCCcCCcch-h--cCCCEEEccCCcCCCCCC----CCCCCcEEEecCCccCcccC----cccccceeecc
Confidence 3445566666666555432 1 255666666666666554 24556666666666655532 13455666666
Q ss_pred CCCCcccCcccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCCEEeCCCCCCCccccccccCcccccccccccCC
Q psy16110 299 GNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQ 378 (719)
Q Consensus 299 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~ 378 (719)
+|.++.++. ...+|+.|++++|+++.++. ..++|+.|++++|+++.++.. ..
T Consensus 271 ~N~L~~Lp~----lp~~L~~L~Ls~N~Lt~LP~---------~p~~L~~LdLS~N~L~~Lp~l---------------p~ 322 (788)
T PRK15387 271 SNPLTHLPA----LPSGLCKLWIFGNQLTSLPV---------LPPGLQELSVSDNQLASLPAL---------------PS 322 (788)
T ss_pred CCchhhhhh----chhhcCEEECcCCccccccc---------cccccceeECCCCccccCCCC---------------cc
Confidence 666554432 12345556666666655543 124566666666655543310 12
Q ss_pred CccEEECCCCCCcCcCCcchhccCCEEEccCCcccccccCccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCC
Q psy16110 379 KLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNA 458 (719)
Q Consensus 379 ~L~~L~L~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 458 (719)
+|+.|++++|.++.+|. .+.+|+.|++++|+++.++.. .++|+.|++++|.+..++. ...+|+.|++++|
T Consensus 323 ~L~~L~Ls~N~L~~LP~--lp~~Lq~LdLS~N~Ls~LP~l---p~~L~~L~Ls~N~L~~LP~----l~~~L~~LdLs~N- 392 (788)
T PRK15387 323 ELCKLWAYNNQLTSLPT--LPSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLTSLPA----LPSGLKELIVSGN- 392 (788)
T ss_pred cccccccccCccccccc--cccccceEecCCCccCCCCCC---CcccceehhhccccccCcc----cccccceEEecCC-
Confidence 35555566665555543 224566666666665555431 2445556666666655432 1234566666666
Q ss_pred CCCCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCC
Q psy16110 459 HLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVG 538 (719)
Q Consensus 459 ~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 538 (719)
.++.+|.. .++|+.|++++|.++.+|.. ..+|+.|++++|+++.+|.. +..+++|+.|++++|++++..+.
T Consensus 393 ~Lt~LP~l----~s~L~~LdLS~N~LssIP~l----~~~L~~L~Ls~NqLt~LP~s-l~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 393 RLTSLPVL----PSELKELMVSGNRLTSLPML----PSGLLSLSVYRNQLTRLPES-LIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred cccCCCCc----ccCCCEEEccCCcCCCCCcc----hhhhhhhhhccCcccccChH-HhhccCCCeEECCCCCCCchHHH
Confidence 45555532 24566666666666655431 23455666666666666543 45566666666666666554333
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.81 E-value=1.3e-19 Score=204.35 Aligned_cols=248 Identities=24% Similarity=0.347 Sum_probs=155.2
Q ss_pred ccCCEEEccCCcccccccCccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEc
Q psy16110 400 DTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDL 479 (719)
Q Consensus 400 ~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~l 479 (719)
.+...|+++++.++.+|..+ .+.|+.|++++|+++.++...+ ++|+.|++++| .+..+|... ..+|+.|++
T Consensus 178 ~~~~~L~L~~~~LtsLP~~I--p~~L~~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N-~LtsLP~~l---~~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLTTIPACI--PEQITTLILDNNELKSLPENLQ---GNIKTLYANSN-QLTSIPATL---PDTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcCcCCccc--ccCCcEEEecCCCCCcCChhhc---cCCCEEECCCC-ccccCChhh---hccccEEEC
Confidence 34667888888888776543 3568888888888887765432 46788888877 666776532 246777777
Q ss_pred CCCCCCCCCchhhcCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCcCCcc
Q psy16110 480 AATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTF 559 (719)
Q Consensus 480 s~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~ 559 (719)
++|.+..++... ..+|+.|++++|+++.+|... .++|++|++++|+++.+. ..+ .++|+.|++++|.++.+
T Consensus 249 s~N~L~~LP~~l---~s~L~~L~Ls~N~L~~LP~~l---~~sL~~L~Ls~N~Lt~LP-~~l--p~sL~~L~Ls~N~Lt~L 319 (754)
T PRK15370 249 SINRITELPERL---PSALQSLDLFHNKISCLPENL---PEELRYLSVYDNSIRTLP-AHL--PSGITHLNVQSNSLTAL 319 (754)
T ss_pred cCCccCcCChhH---hCCCCEEECcCCccCcccccc---CCCCcEEECCCCccccCc-ccc--hhhHHHHHhcCCccccC
Confidence 777777766532 246777777777777666532 246777777777776542 222 13567777777777655
Q ss_pred cCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcc
Q psy16110 560 KGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDY 639 (719)
Q Consensus 560 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~ 639 (719)
+.... ++|+.|++++|.++++ |..+ .++|+.|++++|+++.+|... .++|++|++++|+++.+++.
T Consensus 320 P~~l~--------~sL~~L~Ls~N~Lt~L-P~~l--~~sL~~L~Ls~N~L~~LP~~l---p~~L~~LdLs~N~Lt~LP~~ 385 (754)
T PRK15370 320 PETLP--------PGLKTLEAGENALTSL-PASL--PPELQVLDVSKNQITVLPETL---PPTITTLDVSRNALTNLPEN 385 (754)
T ss_pred Ccccc--------ccceeccccCCccccC-Chhh--cCcccEEECCCCCCCcCChhh---cCCcCEEECCCCcCCCCCHh
Confidence 43221 4577777777776664 4333 256777777777776665432 24667777777777666542
Q ss_pred cCCCCCCCCEEeCCCCcCCCCCc---ccCCCCCCCcEEECCCCcCC
Q psy16110 640 DYGYLPRLRKLNLNNNNIDAISE---TCFFNSSQLQIINLSFNRLE 682 (719)
Q Consensus 640 ~l~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~ 682 (719)
+. ..|+.|++++|+++.++. ..+..++.+..|++.+|+++
T Consensus 386 -l~--~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 386 -LP--AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred -HH--HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 21 356667777777665542 22333466667777777665
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.80 E-value=3.5e-19 Score=200.92 Aligned_cols=249 Identities=22% Similarity=0.352 Sum_probs=193.6
Q ss_pred CCccEEECCCCCCcCcCCcchhccCCEEEccCCcccccccCccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCC
Q psy16110 378 QKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRN 457 (719)
Q Consensus 378 ~~L~~L~L~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 457 (719)
.+...|+++++.++.+|.. .++.++.|++++|.++.++.... ++|+.|++++|++++++.. + .++|+.|++++|
T Consensus 178 ~~~~~L~L~~~~LtsLP~~-Ip~~L~~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~LtsLP~~-l--~~~L~~L~Ls~N 251 (754)
T PRK15370 178 NNKTELRLKILGLTTIPAC-IPEQITTLILDNNELKSLPENLQ--GNIKTLYANSNQLTSIPAT-L--PDTIQEMELSIN 251 (754)
T ss_pred cCceEEEeCCCCcCcCCcc-cccCCcEEEecCCCCCcCChhhc--cCCCEEECCCCccccCChh-h--hccccEEECcCC
Confidence 3578899999999988752 35689999999999998876543 5899999999999887643 2 247899999999
Q ss_pred CCCCCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccC
Q psy16110 458 AHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRV 537 (719)
Q Consensus 458 ~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~ 537 (719)
.+..+|... ..+|+.|++++|+++.++... ..+|+.|++++|+++.++... .++|+.|++++|+++.+..
T Consensus 252 -~L~~LP~~l---~s~L~~L~Ls~N~L~~LP~~l---~~sL~~L~Ls~N~Lt~LP~~l---p~sL~~L~Ls~N~Lt~LP~ 321 (754)
T PRK15370 252 -RITELPERL---PSALQSLDLFHNKISCLPENL---PEELRYLSVYDNSIRTLPAHL---PSGITHLNVQSNSLTALPE 321 (754)
T ss_pred -ccCcCChhH---hCCCCEEECcCCccCcccccc---CCCCcEEECCCCccccCcccc---hhhHHHHHhcCCccccCCc
Confidence 777888653 257999999999998877532 258999999999999887542 2578999999999887633
Q ss_pred CccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhh
Q psy16110 538 GSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELI 617 (719)
Q Consensus 538 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 617 (719)
.+ .++|+.|++++|.++.++... .++|+.|++++|+++.+ |..+ .++|++|++++|+++.+|+...
T Consensus 322 -~l--~~sL~~L~Ls~N~Lt~LP~~l--------~~sL~~L~Ls~N~L~~L-P~~l--p~~L~~LdLs~N~Lt~LP~~l~ 387 (754)
T PRK15370 322 -TL--PPGLKTLEAGENALTSLPASL--------PPELQVLDVSKNQITVL-PETL--PPTITTLDVSRNALTNLPENLP 387 (754)
T ss_pred -cc--cccceeccccCCccccCChhh--------cCcccEEECCCCCCCcC-Chhh--cCCcCEEECCCCcCCCCCHhHH
Confidence 22 368999999999998876433 26899999999998865 5444 3689999999999999887642
Q ss_pred cCCCCCCEEECCCCCCcccCc---ccCCCCCCCCEEeCCCCcCCC
Q psy16110 618 LGLSYLQEIDLSNNQLKTIDD---YDYGYLPRLRKLNLNNNNIDA 659 (719)
Q Consensus 618 ~~l~~L~~L~Ls~n~l~~~~~---~~l~~l~~L~~L~Ls~N~l~~ 659 (719)
.+|+.|++++|++..++. ..+..++.+..|++.+|+++.
T Consensus 388 ---~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 388 ---AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred ---HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCccH
Confidence 368899999999987654 223445788999999999874
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.68 E-value=6.5e-18 Score=177.32 Aligned_cols=213 Identities=22% Similarity=0.206 Sum_probs=131.5
Q ss_pred hhcCCCCccEEEccCCcCCCCChhhhcCCCC---CCEEeCCCCcccc----ccCCccCCC-CCCCEEEccCCcCCcccCC
Q psy16110 491 QFDELLNLKYLCLAHNHLTEIPEMMFKNLLN---LTYLDLSNNNIVN----LRVGSLYGL-PSMKRLDLSFNKLTTFKGD 562 (719)
Q Consensus 491 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~---L~~L~Ls~n~i~~----~~~~~l~~l-~~L~~L~L~~n~l~~~~~~ 562 (719)
.+..+++|+.|++++|.+.......+..+.. |++|++++|++++ .....+..+ ++|+.|++++|.++.....
T Consensus 76 ~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 155 (319)
T cd00116 76 GLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE 155 (319)
T ss_pred HHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH
Confidence 4455666777777776665433333333333 7777777776653 112234445 6777777777776631111
Q ss_pred cCCCCCCCCCCCCcEEECcCCCCCCc----CcCcccCCCCccEEEcCCCCCCCcCh----hhhcCCCCCCEEECCCCCCc
Q psy16110 563 YFNTKSKPNTSSLEELNLNNNELTYL----FPSSFTIHSKLKTLKLAFNKFNYFPK----ELILGLSYLQEIDLSNNQLK 634 (719)
Q Consensus 563 ~~~~~~~~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~----~~l~~l~~L~~L~Ls~n~l~ 634 (719)
.+. ..+..++.|++|++++|.+++. ++..+..+++|++|++++|.++.... ..+..+++|++|++++|.++
T Consensus 156 ~~~-~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~ 234 (319)
T cd00116 156 ALA-KALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLT 234 (319)
T ss_pred HHH-HHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCc
Confidence 100 0112346788888888877742 22334556788888888888775432 23566788999999998887
Q ss_pred ccCcccC-----CCCCCCCEEeCCCCcCCCC----CcccCCCCCCCcEEECCCCcCCCcChH----hhcCc-ccc-EEec
Q psy16110 635 TIDDYDY-----GYLPRLRKLNLNNNNIDAI----SETCFFNSSQLQIINLSFNRLEKLPER----LFNTF-LYT-NYDM 699 (719)
Q Consensus 635 ~~~~~~l-----~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~i~~~----~~~~l-~~L-~L~l 699 (719)
+.....+ ...+.|++|++++|.++.. ....+..+++|+++|+++|+++.-+.. ++... +.| ++++
T Consensus 235 ~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~ 314 (319)
T cd00116 235 DAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWV 314 (319)
T ss_pred hHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhccc
Confidence 5222111 1247899999999988732 123355568999999999999855333 34444 678 9999
Q ss_pred CCCce
Q psy16110 700 APNLV 704 (719)
Q Consensus 700 ~~N~l 704 (719)
.+||+
T Consensus 315 ~~~~~ 319 (319)
T cd00116 315 KDDSF 319 (319)
T ss_pred CCCCC
Confidence 99885
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.65 E-value=1.7e-17 Score=174.11 Aligned_cols=161 Identities=19% Similarity=0.147 Sum_probs=84.4
Q ss_pred CCCCEEeCCCCccccc----cCCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcC----cC
Q psy16110 520 LNLTYLDLSNNNIVNL----RVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLF----PS 591 (719)
Q Consensus 520 ~~L~~L~Ls~n~i~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~----~~ 591 (719)
++|++|++++|.+++. ....+..+++|++|++++|.+++.....+. ..+..+++|++|++++|.+++.. ..
T Consensus 137 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~-~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 215 (319)
T cd00116 137 PALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALA-EGLKANCNLEVLDLNNNGLTDEGASALAE 215 (319)
T ss_pred CCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHH-HHHHhCCCCCEEeccCCccChHHHHHHHH
Confidence 5555555555555421 122344445566666666555421111000 00011246666666666655332 23
Q ss_pred cccCCCCccEEEcCCCCCCCcChhhh-----cCCCCCCEEECCCCCCccc----CcccCCCCCCCCEEeCCCCcCCCCCc
Q psy16110 592 SFTIHSKLKTLKLAFNKFNYFPKELI-----LGLSYLQEIDLSNNQLKTI----DDYDYGYLPRLRKLNLNNNNIDAISE 662 (719)
Q Consensus 592 ~~~~l~~L~~L~L~~n~l~~~~~~~l-----~~l~~L~~L~Ls~n~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~~ 662 (719)
.+..+++|++|++++|.++......+ ...+.|++|++++|.++.. ....+..+++|+++++++|.++....
T Consensus 216 ~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~ 295 (319)
T cd00116 216 TLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGA 295 (319)
T ss_pred HhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHH
Confidence 34556677777777776664222211 1236778888888777521 11234555778888888888775422
Q ss_pred ----ccCCCC-CCCcEEECCCCcC
Q psy16110 663 ----TCFFNS-SQLQIINLSFNRL 681 (719)
Q Consensus 663 ----~~~~~l-~~L~~L~Ls~N~l 681 (719)
..+... +.|+++++.+|++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 296 QLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHHHHhhcCCchhhcccCCCCC
Confidence 223333 6778888877754
No 21
>KOG0617|consensus
Probab=99.49 E-value=5.2e-16 Score=136.22 Aligned_cols=160 Identities=33% Similarity=0.526 Sum_probs=121.0
Q ss_pred CCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCC
Q psy16110 494 ELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTS 573 (719)
Q Consensus 494 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~ 573 (719)
.+..++.|.+++|+++.+++. +..+.+|+.|++++|+|+.. |..++.+++|+.|++.-|++...+ ..|. .++
T Consensus 31 ~~s~ITrLtLSHNKl~~vppn-ia~l~nlevln~~nnqie~l-p~~issl~klr~lnvgmnrl~~lp-rgfg-----s~p 102 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVVPPN-IAELKNLEVLNLSNNQIEEL-PTSISSLPKLRILNVGMNRLNILP-RGFG-----SFP 102 (264)
T ss_pred chhhhhhhhcccCceeecCCc-HHHhhhhhhhhcccchhhhc-ChhhhhchhhhheecchhhhhcCc-cccC-----CCc
Confidence 355667777777877777765 46677788888888887776 556777888888888877776444 3333 347
Q ss_pred CCcEEECcCCCCCC-cCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeC
Q psy16110 574 SLEELNLNNNELTY-LFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNL 652 (719)
Q Consensus 574 ~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L 652 (719)
.|++|||.+|.+.+ ..|..|..++.|+.|+++.|.+..+|++ ++.+++|+.|.++.|.+..++. .++.+.+|++|.+
T Consensus 103 ~levldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~d-vg~lt~lqil~lrdndll~lpk-eig~lt~lrelhi 180 (264)
T KOG0617|consen 103 ALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPD-VGKLTNLQILSLRDNDLLSLPK-EIGDLTRLRELHI 180 (264)
T ss_pred hhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChh-hhhhcceeEEeeccCchhhCcH-HHHHHHHHHHHhc
Confidence 88888888877753 4677777788888888888888888876 6888888888888888887766 5778888888888
Q ss_pred CCCcCCCCCcc
Q psy16110 653 NNNNIDAISET 663 (719)
Q Consensus 653 s~N~l~~~~~~ 663 (719)
.+|+++-++|+
T Consensus 181 qgnrl~vlppe 191 (264)
T KOG0617|consen 181 QGNRLTVLPPE 191 (264)
T ss_pred ccceeeecChh
Confidence 88888877775
No 22
>KOG0617|consensus
Probab=99.48 E-value=8.6e-16 Score=134.85 Aligned_cols=159 Identities=28% Similarity=0.390 Sum_probs=89.6
Q ss_pred CCCCCCEEECcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEE
Q psy16110 216 GLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERI 295 (719)
Q Consensus 216 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 295 (719)
++.++..|.||+|+++.+++. ++.+.+|+.|++++|+++++|. .++.+++|+.|+++-|++..+ |..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~~vppn-ia~l~nlevln~~nnqie~lp~-~issl~klr~lnvgmnrl~~l-prgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVVPPN-IAELKNLEVLNLSNNQIEELPT-SISSLPKLRILNVGMNRLNIL-PRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCceeecCCc-HHHhhhhhhhhcccchhhhcCh-hhhhchhhhheecchhhhhcC-ccccCCCchhhhh
Confidence 345555566666666666554 4556666666666666666665 466666666666666665444 3456666666666
Q ss_pred EccCCCCc-ccCcccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCCEEeCCCCCCCccccccccCccccccccc
Q psy16110 296 ILRGNRLT-TIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFF 374 (719)
Q Consensus 296 ~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l 374 (719)
|+++|.+. ...|+.|-.++.|+.|+++.|.+.-+++ ..+++++|+.|.+..|.+-+ +|..+
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~------dvg~lt~lqil~lrdndll~------------lpkei 169 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPP------DVGKLTNLQILSLRDNDLLS------------LPKEI 169 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcccCCh------hhhhhcceeEEeeccCchhh------------CcHHH
Confidence 66666554 2234555556666666666666655555 24555566666655555422 23334
Q ss_pred ccCCCccEEECCCCCCcCcCC
Q psy16110 375 QDFQKLKSLDLNGNFLINLES 395 (719)
Q Consensus 375 ~~~~~L~~L~L~~n~l~~~~~ 395 (719)
+.+..|++|.+.+|+++.+|+
T Consensus 170 g~lt~lrelhiqgnrl~vlpp 190 (264)
T KOG0617|consen 170 GDLTRLRELHIQGNRLTVLPP 190 (264)
T ss_pred HHHHHHHHHhcccceeeecCh
Confidence 445555555555555555443
No 23
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.27 E-value=1.3e-12 Score=120.87 Aligned_cols=129 Identities=26% Similarity=0.375 Sum_probs=34.4
Q ss_pred CCCCCCEEECcCCCCcccCcCccC-CCccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCE
Q psy16110 216 GLVNLRILDLSDNQIKAIEEGILK-GCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLER 294 (719)
Q Consensus 216 ~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 294 (719)
+..++++|+|++|+|+.+.. ++ .+.+|+.|++++|.|+++.. +..+++|++|++++|.|+.+.......+++|++
T Consensus 17 n~~~~~~L~L~~n~I~~Ie~--L~~~l~~L~~L~Ls~N~I~~l~~--l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTIEN--LGATLDKLEVLDLSNNQITKLEG--LPGLPRLKTLDLSNNRISSISEGLDKNLPNLQE 92 (175)
T ss_dssp -------------------S----TT-TT--EEE-TTS--S--TT------TT--EEE--SS---S-CHHHHHH-TT--E
T ss_pred cccccccccccccccccccc--hhhhhcCCCEEECCCCCCccccC--ccChhhhhhcccCCCCCCccccchHHhCCcCCE
Confidence 33344555555555544432 22 24455555555555555442 444555555555555555543211123555555
Q ss_pred EEccCCCCcccCc-ccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCCEEeC
Q psy16110 295 IILRGNRLTTIEG-GAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNL 350 (719)
Q Consensus 295 L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~L 350 (719)
|++++|+|..+.. ..+..+++|++|++.+|+++.... .....+..+|+|+.||-
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~--YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKN--YRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTT--HHHHHHHH-TT-SEETT
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhh--HHHHHHHHcChhheeCC
Confidence 5555555554331 234455566666666666554321 11113455666666654
No 24
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.24 E-value=2.7e-12 Score=118.75 Aligned_cols=85 Identities=33% Similarity=0.422 Sum_probs=23.3
Q ss_pred CCCCCEEECcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCC-CcccCCCccCEE
Q psy16110 217 LVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKA-DSFLSQRWLERI 295 (719)
Q Consensus 217 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L 295 (719)
+.+|+.|+|++|.|+.+.. +..+++|++|++++|.|+++++.....+++|++|++++|+|..+.. ..++.+++|+.|
T Consensus 41 l~~L~~L~Ls~N~I~~l~~--l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L 118 (175)
T PF14580_consen 41 LDKLEVLDLSNNQITKLEG--LPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVL 118 (175)
T ss_dssp -TT--EEE-TTS--S--TT------TT--EEE--SS---S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EE
T ss_pred hcCCCEEECCCCCCccccC--ccChhhhhhcccCCCCCCccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCccee
Confidence 4445555555555544432 4444555555555555554432111234455555555555444332 233444555555
Q ss_pred EccCCCCc
Q psy16110 296 ILRGNRLT 303 (719)
Q Consensus 296 ~Ls~n~i~ 303 (719)
++.+|+++
T Consensus 119 ~L~~NPv~ 126 (175)
T PF14580_consen 119 SLEGNPVC 126 (175)
T ss_dssp E-TT-GGG
T ss_pred eccCCccc
Confidence 55555444
No 25
>KOG1909|consensus
Probab=99.24 E-value=8.4e-13 Score=129.54 Aligned_cols=189 Identities=19% Similarity=0.194 Sum_probs=113.3
Q ss_pred hcCCCCCCEEeCCCCccccccCC----ccCCCCCCCEEEccCCcCCcccCCcCCC--------CCCCCCCCCcEEECcCC
Q psy16110 516 FKNLLNLTYLDLSNNNIVNLRVG----SLYGLPSMKRLDLSFNKLTTFKGDYFNT--------KSKPNTSSLEELNLNNN 583 (719)
Q Consensus 516 ~~~l~~L~~L~Ls~n~i~~~~~~----~l~~l~~L~~L~L~~n~l~~~~~~~~~~--------~~~~~l~~L~~L~Ls~n 583 (719)
+..++.|++||||+|.+....+. .+.++..|++|+|.+|.+....+..+.. .....-+.|+++...+|
T Consensus 88 L~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rN 167 (382)
T KOG1909|consen 88 LLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRN 167 (382)
T ss_pred HhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecc
Confidence 34455666666666655433222 2234556666666666555433322110 01122366777777777
Q ss_pred CCCCcC----cCcccCCCCccEEEcCCCCCCC----cChhhhcCCCCCCEEECCCCCCccc----CcccCCCCCCCCEEe
Q psy16110 584 ELTYLF----PSSFTIHSKLKTLKLAFNKFNY----FPKELILGLSYLQEIDLSNNQLKTI----DDYDYGYLPRLRKLN 651 (719)
Q Consensus 584 ~l~~~~----~~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~Ls~n~l~~~----~~~~l~~l~~L~~L~ 651 (719)
.+.... ...|...+.|+++.++.|.|.. .....+..+++|++|||++|.++.. ....+..++.|++|+
T Consensus 168 rlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~ 247 (382)
T KOG1909|consen 168 RLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELN 247 (382)
T ss_pred ccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeec
Confidence 776442 2345566778888888877653 2335567788888888888877632 233466677888888
Q ss_pred CCCCcCCCCCcccC-----CCCCCCcEEECCCCcCCC----cChHhhcCcccc-EEecCCCce
Q psy16110 652 LNNNNIDAISETCF-----FNSSQLQIINLSFNRLEK----LPERLFNTFLYT-NYDMAPNLV 704 (719)
Q Consensus 652 Ls~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~----i~~~~~~~l~~L-~L~l~~N~l 704 (719)
+++|.++.-....| ...|+|+.|.+.+|.++. +-.......+.| .|+|++|.+
T Consensus 248 l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 248 LGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 88887776543322 235788888888887762 222233456778 888888887
No 26
>KOG1909|consensus
Probab=99.19 E-value=1.8e-12 Score=127.20 Aligned_cols=86 Identities=23% Similarity=0.272 Sum_probs=36.5
Q ss_pred CCCCcEEECcCCCCCCc----CcCcccCCCCccEEEcCCCCCCCcChhhh-----cCCCCCCEEECCCCCCcc----cCc
Q psy16110 572 TSSLEELNLNNNELTYL----FPSSFTIHSKLKTLKLAFNKFNYFPKELI-----LGLSYLQEIDLSNNQLKT----IDD 638 (719)
Q Consensus 572 l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~l-----~~l~~L~~L~Ls~n~l~~----~~~ 638 (719)
+++|++|||.+|-++.. +...+..|++|++|++++|.+..-...++ ...++|++|.+.+|.|+. ...
T Consensus 212 ~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la 291 (382)
T KOG1909|consen 212 CPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALA 291 (382)
T ss_pred CCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHH
Confidence 34444444444444322 12233444555555555554443222211 223455555555555442 111
Q ss_pred ccCCCCCCCCEEeCCCCcC
Q psy16110 639 YDYGYLPRLRKLNLNNNNI 657 (719)
Q Consensus 639 ~~l~~l~~L~~L~Ls~N~l 657 (719)
..+...+.|+.|+|++|++
T Consensus 292 ~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 292 ACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHhcchhhHHhcCCcccc
Confidence 1222344455555555554
No 27
>KOG3207|consensus
Probab=99.18 E-value=3.1e-12 Score=128.91 Aligned_cols=209 Identities=25% Similarity=0.273 Sum_probs=111.2
Q ss_pred CCCCccEEEcCCCCCCCCCc-hhhcCCCCccEEEccCCcCCCCCh--hhhcCCCCCCEEeCCCCccccccCC-ccCCCCC
Q psy16110 470 PLKKLEVLDLAATGLKSIPQ-YQFDELLNLKYLCLAHNHLTEIPE--MMFKNLLNLTYLDLSNNNIVNLRVG-SLYGLPS 545 (719)
Q Consensus 470 ~l~~L~~L~ls~n~l~~~~~-~~~~~~~~L~~L~L~~n~l~~~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~-~l~~l~~ 545 (719)
++.+|+++.+.++.+...+. .....+++++.|+|++|-+..+.. .....+++|+.|+++.|++...... .-..+++
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 45677777777776655543 334557777777777776664432 2345667777777777765432111 1124556
Q ss_pred CCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcCh-hhhcCCCCCC
Q psy16110 546 MKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPK-ELILGLSYLQ 624 (719)
Q Consensus 546 L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~ 624 (719)
|+.|.|+.|.++.-..... ...+|+|+.|+|..|..-........-+..|++|+|++|++...+. ...+.++.|+
T Consensus 199 lK~L~l~~CGls~k~V~~~----~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~ 274 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWI----LLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLN 274 (505)
T ss_pred hheEEeccCCCCHHHHHHH----HHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchh
Confidence 6777777766652111110 0124666666666664222222333345566666666666555441 1234556666
Q ss_pred EEECCCCCCcccCcccC------CCCCCCCEEeCCCCcCCCCCc-ccCCCCCCCcEEECCCCcCC
Q psy16110 625 EIDLSNNQLKTIDDYDY------GYLPRLRKLNLNNNNIDAISE-TCFFNSSQLQIINLSFNRLE 682 (719)
Q Consensus 625 ~L~Ls~n~l~~~~~~~l------~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~ 682 (719)
.|+++.+.+..+..... ..+++|++|++..|++.+... ..+..+++|+.|.+..|.++
T Consensus 275 ~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 275 QLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred hhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 66666666654432222 334566666666666654321 11233455555555555554
No 28
>KOG0532|consensus
Probab=99.15 E-value=2.1e-12 Score=134.03 Aligned_cols=187 Identities=31% Similarity=0.465 Sum_probs=96.4
Q ss_pred CCCCCCCCCCC-CCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccC
Q psy16110 459 HLSSLPVGGFD-PLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRV 537 (719)
Q Consensus 459 ~l~~l~~~~~~-~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~ 537 (719)
.+.+.|...+. .+..-...|++.|++..++. .+..+..|+.+.++.|.+..++.. ..++..|+++|++.|++... |
T Consensus 61 rlk~fpr~a~~~~ltdt~~aDlsrNR~~elp~-~~~~f~~Le~liLy~n~~r~ip~~-i~~L~~lt~l~ls~NqlS~l-p 137 (722)
T KOG0532|consen 61 RLKEFPRGAASYDLTDTVFADLSRNRFSELPE-EACAFVSLESLILYHNCIRTIPEA-ICNLEALTFLDLSSNQLSHL-P 137 (722)
T ss_pred hhhcCCCccccccccchhhhhccccccccCch-HHHHHHHHHHHHHHhccceecchh-hhhhhHHHHhhhccchhhcC-C
Confidence 44555543332 23333445666666666554 234445566666666666555543 45555666666666665544 2
Q ss_pred CccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhh
Q psy16110 538 GSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELI 617 (719)
Q Consensus 538 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 617 (719)
..+..++ |+.|.+++|+++.++.++- ....|..||.+.|++... |..+..+.+|+.|++..|++..+|++.
T Consensus 138 ~~lC~lp-Lkvli~sNNkl~~lp~~ig------~~~tl~~ld~s~nei~sl-psql~~l~slr~l~vrRn~l~~lp~El- 208 (722)
T KOG0532|consen 138 DGLCDLP-LKVLIVSNNKLTSLPEEIG------LLPTLAHLDVSKNEIQSL-PSQLGYLTSLRDLNVRRNHLEDLPEEL- 208 (722)
T ss_pred hhhhcCc-ceeEEEecCccccCCcccc------cchhHHHhhhhhhhhhhc-hHHhhhHHHHHHHHHhhhhhhhCCHHH-
Confidence 2233332 5555556665555544332 124555555555555554 334555555555555555555555542
Q ss_pred cCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCC
Q psy16110 618 LGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDA 659 (719)
Q Consensus 618 ~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 659 (719)
.. =.|..||+|.|++..++. .|.+|+.|++|-|.+|.+..
T Consensus 209 ~~-LpLi~lDfScNkis~iPv-~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 209 CS-LPLIRLDFSCNKISYLPV-DFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred hC-CceeeeecccCceeecch-hhhhhhhheeeeeccCCCCC
Confidence 22 235555555555555544 45555555555555555544
No 29
>KOG3207|consensus
Probab=99.14 E-value=9.3e-12 Score=125.55 Aligned_cols=135 Identities=23% Similarity=0.273 Sum_probs=63.5
Q ss_pred hccCCEEEccCCcccc--cccCccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccE
Q psy16110 399 EDTLDNLNVRDNQITT--LSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEV 476 (719)
Q Consensus 399 ~~~L~~L~l~~n~l~~--~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~ 476 (719)
.++|+.|.+++|.++. +......+|+|+.|++.+|....+......-+..|+.|+|++|..+..-.......++.|+.
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhh
Confidence 3455555555555541 11112236666666666665333333333445566666666663332221222344566666
Q ss_pred EEcCCCCCCCCCchhh------cCCCCccEEEccCCcCCCCCh-hhhcCCCCCCEEeCCCCccc
Q psy16110 477 LDLAATGLKSIPQYQF------DELLNLKYLCLAHNHLTEIPE-MMFKNLLNLTYLDLSNNNIV 533 (719)
Q Consensus 477 L~ls~n~l~~~~~~~~------~~~~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~ 533 (719)
|+++.+++.++..... ..+++|++|++..|++..++. ..+..+++|+.|.+..|.++
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 6666666555432111 234555555555555543332 11223344444444444443
No 30
>KOG1259|consensus
Probab=99.13 E-value=8.4e-12 Score=119.59 Aligned_cols=203 Identities=20% Similarity=0.200 Sum_probs=120.3
Q ss_pred CCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCC-ccccccCCccCCCCCCCE
Q psy16110 470 PLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNN-NIVNLRVGSLYGLPSMKR 548 (719)
Q Consensus 470 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n-~i~~~~~~~l~~l~~L~~ 548 (719)
.+.+|+.+.++.|.-..|.. ....-+.|+++......++..+. +-....+....-+.- -.++........+..|++
T Consensus 212 ~f~~l~~~~~s~~~~~~i~~-~~~~kptl~t~~v~~s~~~~~~~--l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~Lte 288 (490)
T KOG1259|consen 212 AFRNLKTLKFSALSTENIVD-IELLKPTLQTICVHNTTIQDVPS--LLPETILADPSGSEPSTSNGSALVSADTWQELTE 288 (490)
T ss_pred Hhhhhheeeeeccchhheec-eeecCchhheeeeeccccccccc--ccchhhhcCccCCCCCccCCceEEecchHhhhhh
Confidence 35677777777775444432 11234667777776655443322 111112211111111 011111122334567778
Q ss_pred EEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEEC
Q psy16110 549 LDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDL 628 (719)
Q Consensus 549 L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 628 (719)
++|++|.++.+....- -.+.++.|++|+|.+..+. .+..+++|+.|+|++|.++.+..+ -..+-+.+.|.|
T Consensus 289 lDLS~N~I~~iDESvK------L~Pkir~L~lS~N~i~~v~--nLa~L~~L~~LDLS~N~Ls~~~Gw-h~KLGNIKtL~L 359 (490)
T KOG1259|consen 289 LDLSGNLITQIDESVK------LAPKLRRLILSQNRIRTVQ--NLAELPQLQLLDLSGNLLAECVGW-HLKLGNIKTLKL 359 (490)
T ss_pred ccccccchhhhhhhhh------hccceeEEeccccceeeeh--hhhhcccceEeecccchhHhhhhh-HhhhcCEeeeeh
Confidence 8888887776654321 1377888888888877763 367777888888888877765432 234567777788
Q ss_pred CCCCCcccCcccCCCCCCCCEEeCCCCcCCCCC-cccCCCCCCCcEEECCCCcCCCcCh
Q psy16110 629 SNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAIS-ETCFFNSSQLQIINLSFNRLEKLPE 686 (719)
Q Consensus 629 s~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~i~~ 686 (719)
++|.+.++.. +.++-+|..||+++|+|..+. ...++++|-|+.+.|.+|+++.+++
T Consensus 360 a~N~iE~LSG--L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 360 AQNKIETLSG--LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhhhHhhhhh--hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 8887776653 566677777888888777653 2356777778888888887776654
No 31
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.10 E-value=1.3e-10 Score=125.67 Aligned_cols=198 Identities=36% Similarity=0.475 Sum_probs=132.3
Q ss_pred EEeCcCCCCCCCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCC-CccEEEccCCcCCCCChhhhcCCCCCCEEeCCC
Q psy16110 451 HLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELL-NLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSN 529 (719)
Q Consensus 451 ~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 529 (719)
.+.+..+........ ....+.++.+++.+|.++.+++. ..... +|+.|++++|.+..++. ....+++|+.|++++
T Consensus 97 ~l~~~~~~~~~~~~~--~~~~~~l~~L~l~~n~i~~i~~~-~~~~~~nL~~L~l~~N~i~~l~~-~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSNISE--LLELTNLTSLDLDNNNITDIPPL-IGLLKSNLKELDLSDNKIESLPS-PLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccCchh--hhcccceeEEecCCcccccCccc-cccchhhcccccccccchhhhhh-hhhccccccccccCC
Confidence 566666632132222 23446788888888888887763 23342 78888888888887753 256778888888888
Q ss_pred CccccccCCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCC
Q psy16110 530 NNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKF 609 (719)
Q Consensus 530 n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 609 (719)
|++..+.+ .....+.|+.|++++|++..++...- ....|++|++++|.+... +..+..+.++..+.+.+|++
T Consensus 173 N~l~~l~~-~~~~~~~L~~L~ls~N~i~~l~~~~~------~~~~L~~l~~~~N~~~~~-~~~~~~~~~l~~l~l~~n~~ 244 (394)
T COG4886 173 NDLSDLPK-LLSNLSNLNNLDLSGNKISDLPPEIE------LLSALEELDLSNNSIIEL-LSSLSNLKNLSGLELSNNKL 244 (394)
T ss_pred chhhhhhh-hhhhhhhhhheeccCCccccCchhhh------hhhhhhhhhhcCCcceec-chhhhhcccccccccCCcee
Confidence 88877633 33367778888888888877765421 124577888887754333 44566777777777777777
Q ss_pred CCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcc
Q psy16110 610 NYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISET 663 (719)
Q Consensus 610 ~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~ 663 (719)
..++. .+..+++++.|++++|.++.+.. ++.+.+++.|++++|.+..+++.
T Consensus 245 ~~~~~-~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 245 EDLPE-SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred eeccc-hhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 66432 35667777777777777777765 66777777777777777766554
No 32
>KOG1259|consensus
Probab=99.08 E-value=1.2e-11 Score=118.46 Aligned_cols=127 Identities=24% Similarity=0.358 Sum_probs=68.7
Q ss_pred cccEEEcCCCCccccCcccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccC
Q psy16110 165 PIRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNL 244 (719)
Q Consensus 165 ~L~~L~Ls~n~i~~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 244 (719)
-++.+|||+|.|+.|.+++ ...+.++.|++|+|.|.. .+.+..+++|+.||||+|.+..+.. .-.++-+.
T Consensus 285 ~LtelDLS~N~I~~iDESv--KL~Pkir~L~lS~N~i~~-------v~nLa~L~~L~~LDLS~N~Ls~~~G-wh~KLGNI 354 (490)
T KOG1259|consen 285 ELTELDLSGNLITQIDESV--KLAPKLRRLILSQNRIRT-------VQNLAELPQLQLLDLSGNLLAECVG-WHLKLGNI 354 (490)
T ss_pred hhhhccccccchhhhhhhh--hhccceeEEeccccceee-------ehhhhhcccceEeecccchhHhhhh-hHhhhcCE
Confidence 3777888888877777665 456677777777776653 1235566666666666666655433 12334455
Q ss_pred cEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCC-CcccCCCccCEEEccCCCCc
Q psy16110 245 LELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKA-DSFLSQRWLERIILRGNRLT 303 (719)
Q Consensus 245 ~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~ 303 (719)
++|.|++|.+..+.. +.++.+|..||+++|+|..+.. ..+++++-|+++.+.+|.+.
T Consensus 355 KtL~La~N~iE~LSG--L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 355 KTLKLAQNKIETLSG--LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred eeeehhhhhHhhhhh--hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 555555555544442 4444444444444444443322 23344444444444444443
No 33
>KOG0531|consensus
Probab=99.07 E-value=2.3e-11 Score=131.67 Aligned_cols=211 Identities=31% Similarity=0.459 Sum_probs=101.7
Q ss_pred ccEEEcCCCCccccCcccccchhccccEEEcCCCcCCCcCCCCCCccc-ccCCCCCCEEECcCCCCcccCcCccCCCccC
Q psy16110 166 IRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSE-FHGLVNLRILDLSDNQIKAIEEGILKGCDNL 244 (719)
Q Consensus 166 L~~L~Ls~n~i~~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 244 (719)
++.+++..|.|.++...+ ..+++|++|++.+|.|... .. +..+++|++|++++|.|+.+.. +..+..|
T Consensus 74 l~~l~l~~n~i~~~~~~l--~~~~~l~~l~l~~n~i~~i-------~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L 142 (414)
T KOG0531|consen 74 LKELNLRQNLIAKILNHL--SKLKSLEALDLYDNKIEKI-------ENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLL 142 (414)
T ss_pred HHhhccchhhhhhhhccc--ccccceeeeeccccchhhc-------ccchhhhhcchheeccccccccccc--hhhccch
Confidence 455555555555533222 2345556666666655541 12 4445566666666665555543 3445555
Q ss_pred cEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCC-CcccCCCccCEEEccCCCCcccCcccccCcccCcEEEcCC
Q psy16110 245 LELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKA-DSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGY 323 (719)
Q Consensus 245 ~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 323 (719)
+.|++++|.|+.+.. +..++.|+.+++++|.+..+.. . ...+.+++.+++.+|.+..+.. +..+..+..+++..
T Consensus 143 ~~L~l~~N~i~~~~~--~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~--~~~~~~l~~~~l~~ 217 (414)
T KOG0531|consen 143 KELNLSGNLISDISG--LESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIEG--LDLLKKLVLLSLLD 217 (414)
T ss_pred hhheeccCcchhccC--CccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcccc--hHHHHHHHHhhccc
Confidence 566666665555553 4445555555665555555543 1 2445555555555555554432 23333344445555
Q ss_pred CCCCCcCCCccccccccCCCC--CCEEeCCCCCCCccccccccCcccccccccccCCCccEEECCCCCCcCcCCcchhcc
Q psy16110 324 NRLNKLNSDTFQGGAFNGLAK--IHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDT 401 (719)
Q Consensus 324 n~l~~~~~~~~~~~~l~~l~~--L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~~ 401 (719)
|.++.+.. +..... |+.+++++|++..+. ..+..+..+..+++.+|.+...........
T Consensus 218 n~i~~~~~-------l~~~~~~~L~~l~l~~n~i~~~~------------~~~~~~~~l~~l~~~~n~~~~~~~~~~~~~ 278 (414)
T KOG0531|consen 218 NKISKLEG-------LNELVMLHLRELYLSGNRISRSP------------EGLENLKNLPVLDLSSNRISNLEGLERLPK 278 (414)
T ss_pred ccceeccC-------cccchhHHHHHHhcccCcccccc------------ccccccccccccchhhccccccccccccch
Confidence 55544432 111222 555555555554331 112334455555555555554444333334
Q ss_pred CCEEEccCCc
Q psy16110 402 LDNLNVRDNQ 411 (719)
Q Consensus 402 L~~L~l~~n~ 411 (719)
+..+....+.
T Consensus 279 ~~~~~~~~~~ 288 (414)
T KOG0531|consen 279 LSELWLNDNK 288 (414)
T ss_pred HHHhccCcch
Confidence 4444444443
No 34
>KOG0532|consensus
Probab=99.06 E-value=7.5e-12 Score=130.00 Aligned_cols=191 Identities=23% Similarity=0.254 Sum_probs=136.7
Q ss_pred cccccCCcCccccccCCC-CcccEEEcCCCCccccCcccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEE
Q psy16110 146 QRWVGHQILPMQIFSSSD-IPIRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILD 224 (719)
Q Consensus 146 ~~~~~~~~lp~~~~~~~~-~~L~~L~Ls~n~i~~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~ 224 (719)
+.+..+++.|...+. ++ ......||+.|++..+|..+ ..+..|+.+.|..|.+.. -++++.++..|.+||
T Consensus 57 Ls~rrlk~fpr~a~~-~~ltdt~~aDlsrNR~~elp~~~--~~f~~Le~liLy~n~~r~------ip~~i~~L~~lt~l~ 127 (722)
T KOG0532|consen 57 LSGRRLKEFPRGAAS-YDLTDTVFADLSRNRFSELPEEA--CAFVSLESLILYHNCIRT------IPEAICNLEALTFLD 127 (722)
T ss_pred cccchhhcCCCcccc-ccccchhhhhccccccccCchHH--HHHHHHHHHHHHhcccee------cchhhhhhhHHHHhh
Confidence 344445566655544 22 23567888888888888766 345678888888887763 235778888888888
Q ss_pred CcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcc
Q psy16110 225 LSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTT 304 (719)
Q Consensus 225 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~ 304 (719)
|+.|+++.++... .. --|+.|-+++|+++.+|+ .++...+|..||.+.|.+..++ ..+.++.+|+.|.+..|++..
T Consensus 128 ls~NqlS~lp~~l-C~-lpLkvli~sNNkl~~lp~-~ig~~~tl~~ld~s~nei~slp-sql~~l~slr~l~vrRn~l~~ 203 (722)
T KOG0532|consen 128 LSSNQLSHLPDGL-CD-LPLKVLIVSNNKLTSLPE-EIGLLPTLAHLDVSKNEIQSLP-SQLGYLTSLRDLNVRRNHLED 203 (722)
T ss_pred hccchhhcCChhh-hc-CcceeEEEecCccccCCc-ccccchhHHHhhhhhhhhhhch-HHhhhHHHHHHHHHhhhhhhh
Confidence 8888888877653 22 347888888888888887 4677788888888888887774 446777888888888888777
Q ss_pred cCcccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCCEEeCCCCCCCc
Q psy16110 305 IEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNK 357 (719)
Q Consensus 305 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~ 357 (719)
.+++ +. .-.|..||++.|++..++. .|.+++.|++|-|.+|.++.
T Consensus 204 lp~E-l~-~LpLi~lDfScNkis~iPv------~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 204 LPEE-LC-SLPLIRLDFSCNKISYLPV------DFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred CCHH-Hh-CCceeeeecccCceeecch------hhhhhhhheeeeeccCCCCC
Confidence 7653 33 3357778888888888776 57778888888888887754
No 35
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.06 E-value=1.8e-10 Score=124.42 Aligned_cols=200 Identities=36% Similarity=0.482 Sum_probs=153.0
Q ss_pred cEEEcCCCCCCCCCchhhcCCCCccEEEccCCcCCCCChhhhcCCC-CCCEEeCCCCccccccCCccCCCCCCCEEEccC
Q psy16110 475 EVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLL-NLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSF 553 (719)
Q Consensus 475 ~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~ 553 (719)
..++...+.+..-.. .....+.++.|++.+|.+++++... .... +|++|++++|++..+ +..+..+++|+.|++++
T Consensus 96 ~~l~~~~~~~~~~~~-~~~~~~~l~~L~l~~n~i~~i~~~~-~~~~~nL~~L~l~~N~i~~l-~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 96 PSLDLNLNRLRSNIS-ELLELTNLTSLDLDNNNITDIPPLI-GLLKSNLKELDLSDNKIESL-PSPLRNLPNLKNLDLSF 172 (394)
T ss_pred ceeeccccccccCch-hhhcccceeEEecCCcccccCcccc-ccchhhcccccccccchhhh-hhhhhccccccccccCC
Confidence 357777777633332 2345578999999999999888742 3343 899999999998886 35677889999999999
Q ss_pred CcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCC
Q psy16110 554 NKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQL 633 (719)
Q Consensus 554 n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l 633 (719)
|++.+++.... ..+.|+.|++++|++..+ |........|++|.+++|.+...+.. +..+..+..+.+.+|++
T Consensus 173 N~l~~l~~~~~------~~~~L~~L~ls~N~i~~l-~~~~~~~~~L~~l~~~~N~~~~~~~~-~~~~~~l~~l~l~~n~~ 244 (394)
T COG4886 173 NDLSDLPKLLS------NLSNLNNLDLSGNKISDL-PPEIELLSALEELDLSNNSIIELLSS-LSNLKNLSGLELSNNKL 244 (394)
T ss_pred chhhhhhhhhh------hhhhhhheeccCCccccC-chhhhhhhhhhhhhhcCCcceecchh-hhhcccccccccCCcee
Confidence 99988776532 247899999999999887 44445666799999999965544433 57788888888988988
Q ss_pred cccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCcCCCcChHh
Q psy16110 634 KTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERL 688 (719)
Q Consensus 634 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~ 688 (719)
..++. .++.++.++.|++++|+++.+.. +....+++.||+++|.+..+++..
T Consensus 245 ~~~~~-~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 245 EDLPE-SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred eeccc-hhccccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 77533 57788889999999999998876 778889999999999888766544
No 36
>KOG0531|consensus
Probab=99.01 E-value=4.1e-11 Score=129.68 Aligned_cols=128 Identities=30% Similarity=0.438 Sum_probs=66.1
Q ss_pred ccCCEEEccCCcccccccCccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEc
Q psy16110 400 DTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDL 479 (719)
Q Consensus 400 ~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~l 479 (719)
..++.+++..|.+..+......+.+|+.|++.+|.|.++... +..+++|++|++++| .++.+.. +..++.|+.|++
T Consensus 72 ~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~-l~~~~~L~~L~ls~N-~I~~i~~--l~~l~~L~~L~l 147 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENL-LSSLVNLQVLDLSFN-KITKLEG--LSTLTLLKELNL 147 (414)
T ss_pred HhHHhhccchhhhhhhhcccccccceeeeeccccchhhcccc-hhhhhcchheecccc-ccccccc--hhhccchhhhee
Confidence 345555555555555333334456666666666666665431 344556666666666 5554443 334444555555
Q ss_pred CCCCCCCCCchhhcCCCCccEEEccCCcCCCCCh-hhhcCCCCCCEEeCCCCcccc
Q psy16110 480 AATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPE-MMFKNLLNLTYLDLSNNNIVN 534 (719)
Q Consensus 480 s~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~ 534 (719)
++|.++.+.. +..+.+|+.+++++|++..+.. . ...+.+++.+++.+|.+..
T Consensus 148 ~~N~i~~~~~--~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~ 200 (414)
T KOG0531|consen 148 SGNLISDISG--LESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE 200 (414)
T ss_pred ccCcchhccC--CccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc
Confidence 5555555442 3335555555555555554443 1 2334455555555555444
No 37
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.91 E-value=6.3e-10 Score=84.63 Aligned_cols=59 Identities=39% Similarity=0.604 Sum_probs=30.8
Q ss_pred CCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCc
Q psy16110 622 YLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNR 680 (719)
Q Consensus 622 ~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 680 (719)
+|++|++++|+++.+++..|.++++|++|++++|+++.+++..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44555555555555555455555555555555555555555555555555555555554
No 38
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.90 E-value=1e-09 Score=83.51 Aligned_cols=61 Identities=39% Similarity=0.616 Sum_probs=43.8
Q ss_pred CCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcC
Q psy16110 597 SKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNI 657 (719)
Q Consensus 597 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l 657 (719)
|+|++|++++|+++.+++.+|.++++|++|++++|+++.+++..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4567777777777777777777777777777777777777776777777777777777764
No 39
>PLN03150 hypothetical protein; Provisional
Probab=98.82 E-value=1.1e-08 Score=115.76 Aligned_cols=106 Identities=23% Similarity=0.263 Sum_probs=59.7
Q ss_pred CcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCC
Q psy16110 575 LEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNN 654 (719)
Q Consensus 575 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~ 654 (719)
++.|+|++|.+.+.+|..+..+++|+.|+|++|.+.+..+..+..+++|+.|+|++|++++..+..++++++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 55666666666666666666666666666666666543333455566666666666666555454555566666666666
Q ss_pred CcCCCCCcccCCCC-CCCcEEECCCCc
Q psy16110 655 NNIDAISETCFFNS-SQLQIINLSFNR 680 (719)
Q Consensus 655 N~l~~~~~~~~~~l-~~L~~L~Ls~N~ 680 (719)
|++++..|..+... .++..+++.+|.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCc
Confidence 66555544444332 244455555553
No 40
>KOG4658|consensus
Probab=98.81 E-value=3.4e-09 Score=122.43 Aligned_cols=127 Identities=21% Similarity=0.278 Sum_probs=86.3
Q ss_pred cccEEEcCCCCccccCcccccchhccccEEEcCCCc--CCCcCCCCCCcccccCCCCCCEEECcCCC-CcccCcCccCCC
Q psy16110 165 PIRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNL--FGDSLNPIFSTSEFHGLVNLRILDLSDNQ-IKAIEEGILKGC 241 (719)
Q Consensus 165 ~L~~L~Ls~n~i~~l~~~~f~~~~~~L~~L~Ls~n~--i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~~l 241 (719)
.+++..+-+|.+..++... .++.|++|-+..|. +.. +..+.|..++.|++|||++|. +..+| +.++++
T Consensus 524 ~~rr~s~~~~~~~~~~~~~---~~~~L~tLll~~n~~~l~~-----is~~ff~~m~~LrVLDLs~~~~l~~LP-~~I~~L 594 (889)
T KOG4658|consen 524 SVRRMSLMNNKIEHIAGSS---ENPKLRTLLLQRNSDWLLE-----ISGEFFRSLPLLRVLDLSGNSSLSKLP-SSIGEL 594 (889)
T ss_pred heeEEEEeccchhhccCCC---CCCccceEEEeecchhhhh-----cCHHHHhhCcceEEEECCCCCccCcCC-hHHhhh
Confidence 4778888888877777654 34567777777775 222 333457778888888888764 33344 356777
Q ss_pred ccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCC
Q psy16110 242 DNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNR 301 (719)
Q Consensus 242 ~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 301 (719)
-+||+|+++++.+..+|. .+.+++.|.+|++..+.-....+.....+.+|++|.+....
T Consensus 595 i~LryL~L~~t~I~~LP~-~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 595 VHLRYLDLSDTGISHLPS-GLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred hhhhcccccCCCccccch-HHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 888888888888887776 57777778888877766544445555567777777775543
No 41
>PLN03150 hypothetical protein; Provisional
Probab=98.73 E-value=2e-08 Score=113.69 Aligned_cols=106 Identities=25% Similarity=0.293 Sum_probs=58.3
Q ss_pred ccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEECCC
Q psy16110 599 LKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSF 678 (719)
Q Consensus 599 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 678 (719)
++.|+|++|.+.+..+..+..+++|+.|+|++|.+.+..+..+..+++|+.|+|++|++++.+|..+.++++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 45556666665554444455566666666666666554444555566666666666666655555555566666666666
Q ss_pred CcCC-CcChHhhcCcccc-EEecCCCce
Q psy16110 679 NRLE-KLPERLFNTFLYT-NYDMAPNLV 704 (719)
Q Consensus 679 N~l~-~i~~~~~~~l~~L-~L~l~~N~l 704 (719)
|+++ .+|.........+ .+++.+|+.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCcc
Confidence 6555 3443322222344 555666654
No 42
>KOG1859|consensus
Probab=98.73 E-value=3.6e-10 Score=120.60 Aligned_cols=176 Identities=24% Similarity=0.296 Sum_probs=124.3
Q ss_pred cCCCCCCEEeCCCCccccccCCccCCC-CCCCEEEccCCcCCcc-------cCCcCCCCCCCCCCCCcEEECcCCCCCCc
Q psy16110 517 KNLLNLTYLDLSNNNIVNLRVGSLYGL-PSMKRLDLSFNKLTTF-------KGDYFNTKSKPNTSSLEELNLNNNELTYL 588 (719)
Q Consensus 517 ~~l~~L~~L~Ls~n~i~~~~~~~l~~l-~~L~~L~L~~n~l~~~-------~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 588 (719)
-.+.+|+.|.+.++.+... . .+..+ ..|++|... |.+..+ .+++-.. ..+-.|...+.++|.+..+
T Consensus 106 fpF~sLr~LElrg~~L~~~-~-GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns---~~Wn~L~~a~fsyN~L~~m 179 (1096)
T KOG1859|consen 106 FPFRSLRVLELRGCDLSTA-K-GLQELRHQLEKLICH-NSLDALRHVFASCGGDISNS---PVWNKLATASFSYNRLVLM 179 (1096)
T ss_pred ccccceeeEEecCcchhhh-h-hhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccc---hhhhhHhhhhcchhhHHhH
Confidence 3457888888888877652 1 11111 245554332 222211 1111111 1234577888899988776
Q ss_pred CcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCC
Q psy16110 589 FPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNS 668 (719)
Q Consensus 589 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 668 (719)
..++.-++.|+.|+|++|+++.+. .+..++.|++|||++|.+..++.....++. |+.|.+++|.++.+-. +.++
T Consensus 180 -D~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL~g--ie~L 253 (1096)
T KOG1859|consen 180 -DESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTLRG--IENL 253 (1096)
T ss_pred -HHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhhhh--HHhh
Confidence 456788899999999999999876 578899999999999999988876667776 9999999999988753 6788
Q ss_pred CCCcEEECCCCcCCCcCh-HhhcCcccc-EEecCCCce
Q psy16110 669 SQLQIINLSFNRLEKLPE-RLFNTFLYT-NYDMAPNLV 704 (719)
Q Consensus 669 ~~L~~L~Ls~N~l~~i~~-~~~~~l~~L-~L~l~~N~l 704 (719)
.+|+.||+++|-|+.... .-+..+..| .|+|.|||+
T Consensus 254 ksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 254 KSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred hhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 999999999997764332 113456788 999999999
No 43
>KOG4658|consensus
Probab=98.67 E-value=2.2e-08 Score=115.83 Aligned_cols=103 Identities=20% Similarity=0.238 Sum_probs=45.0
Q ss_pred CCCEEECcCCCCcccCcCccCCCccCcEEECCCCc--CCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEE
Q psy16110 219 NLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNR--FTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERII 296 (719)
Q Consensus 219 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~--l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 296 (719)
..+...+-+|.+..+... ..++.|++|-+..|. +..++...|..++.|++||+++|.--.-.|..++.+-+|++|+
T Consensus 524 ~~rr~s~~~~~~~~~~~~--~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 524 SVRRMSLMNNKIEHIAGS--SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred heeEEEEeccchhhccCC--CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 344444444444433322 123344444444443 3444433344455555555554432222234444455555555
Q ss_pred ccCCCCcccCcccccCcccCcEEEcCCC
Q psy16110 297 LRGNRLTTIEGGAFNGLAKIHILNLGYN 324 (719)
Q Consensus 297 Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 324 (719)
+++..+..++ ..++++++|.+|++..+
T Consensus 602 L~~t~I~~LP-~~l~~Lk~L~~Lnl~~~ 628 (889)
T KOG4658|consen 602 LSDTGISHLP-SGLGNLKKLIYLNLEVT 628 (889)
T ss_pred ccCCCccccc-hHHHHHHhhheeccccc
Confidence 5554444332 23444445555554443
No 44
>KOG1859|consensus
Probab=98.55 E-value=1.7e-09 Score=115.61 Aligned_cols=158 Identities=24% Similarity=0.307 Sum_probs=100.8
Q ss_pred ccccccCCCCcccEEEcCCCCccccCcccccchhcc--------------------------------ccEEEcCCCcCC
Q psy16110 155 PMQIFSSSDIPIRRLDFSGNALRRLSDKLFSPHRDT--------------------------------LQELRLADNLFG 202 (719)
Q Consensus 155 p~~~~~~~~~~L~~L~Ls~n~i~~l~~~~f~~~~~~--------------------------------L~~L~Ls~n~i~ 202 (719)
|..+|.. ..|++|.|.++.|..+-. + .+.... |...+.++|.+.
T Consensus 102 pi~ifpF--~sLr~LElrg~~L~~~~G-L-~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPF--RSLRVLELRGCDLSTAKG-L-QELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV 177 (1096)
T ss_pred Cceeccc--cceeeEEecCcchhhhhh-h-HHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH
Confidence 4455655 369999999998865211 0 112223 344444444443
Q ss_pred CcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccC
Q psy16110 203 DSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLK 282 (719)
Q Consensus 203 ~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~ 282 (719)
. -.+++.-++.|++|||++|++.+.. .+..|++|++|||++|.+..+|.....++. |+.|.+++|.++.+.
T Consensus 178 ~------mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL~ 248 (1096)
T KOG1859|consen 178 L------MDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTLR 248 (1096)
T ss_pred h------HHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhhh
Confidence 1 1234555677778888888777765 467777788888888877777765555555 777888887777663
Q ss_pred CCcccCCCccCEEEccCCCCcccCc-ccccCcccCcEEEcCCCCCC
Q psy16110 283 ADSFLSQRWLERIILRGNRLTTIEG-GAFNGLAKIHILNLGYNRLN 327 (719)
Q Consensus 283 ~~~~~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~ 327 (719)
.+.++.+|+.||+++|-+.+... ..+..+..|+.|+|.+|++-
T Consensus 249 --gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 249 --GIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred --hHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 36677777778888777664431 22455667777777777664
No 45
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.44 E-value=4.4e-07 Score=81.02 Aligned_cols=114 Identities=20% Similarity=0.389 Sum_probs=47.8
Q ss_pred cccCCCCCCEEECcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCcc
Q psy16110 213 EFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWL 292 (719)
Q Consensus 213 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 292 (719)
+|.++.+|+.+.+.. .+..+...+|.++++|+.+.+.++ +..++..+|.++++|+.+.+.. .+..+....|..+++|
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l 83 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNL 83 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTE
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccc
Confidence 445555555555543 355555555555555555555543 5555555555555555555543 4444445555555556
Q ss_pred CEEEccCCCCcccCcccccCcccCcEEEcCCCCCCCcCCC
Q psy16110 293 ERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSD 332 (719)
Q Consensus 293 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 332 (719)
+.+++..+ +..+...+|.++ +|+.+.+.. .+..++..
T Consensus 84 ~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~ 120 (129)
T PF13306_consen 84 KNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEEN 120 (129)
T ss_dssp CEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----
T ss_pred cccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCc
Confidence 65555543 445555555555 555555553 34444443
No 46
>KOG4579|consensus
Probab=98.40 E-value=1.3e-08 Score=86.88 Aligned_cols=130 Identities=21% Similarity=0.318 Sum_probs=101.2
Q ss_pred CCcEEECcCCCCCCc--CcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEe
Q psy16110 574 SLEELNLNNNELTYL--FPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLN 651 (719)
Q Consensus 574 ~L~~L~Ls~n~l~~~--~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ 651 (719)
.+..+||+.|++..+ .+..+.....|+..+|++|.+..+|+..-...+..+.|++++|.+.+++.+ +..++.|+.|+
T Consensus 28 E~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE-~Aam~aLr~lN 106 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEE-LAAMPALRSLN 106 (177)
T ss_pred HhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHH-HhhhHHhhhcc
Confidence 466788888887754 123345567788889999999999988666667889999999999998885 88999999999
Q ss_pred CCCCcCCCCCcccCCCCCCCcEEECCCCcCCCcChHhhcCcccc-EEecCCCceee
Q psy16110 652 LNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERLFNTFLYT-NYDMAPNLVFQ 706 (719)
Q Consensus 652 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~L~l~~N~l~~ 706 (719)
++.|.+...+.. +..+.+|-.||..+|.+..||...|.. +.. .++++++|+..
T Consensus 107 l~~N~l~~~p~v-i~~L~~l~~Lds~~na~~eid~dl~~s-~~~al~~lgnepl~~ 160 (177)
T KOG4579|consen 107 LRFNPLNAEPRV-IAPLIKLDMLDSPENARAEIDVDLFYS-SLPALIKLGNEPLGD 160 (177)
T ss_pred cccCccccchHH-HHHHHhHHHhcCCCCccccCcHHHhcc-ccHHHHHhcCCcccc
Confidence 999999877654 445888999999999999999886642 233 56678888854
No 47
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.39 E-value=9.3e-07 Score=78.89 Aligned_cols=128 Identities=18% Similarity=0.378 Sum_probs=64.8
Q ss_pred ccCcccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccCcEEECCCCcCCcC
Q psy16110 178 RLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSI 257 (719)
Q Consensus 178 ~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i 257 (719)
.|+..+|. .+++|+.+.+.. .+.. +...+|.++++|+.+++..+ +..+...+|.++.+|+.+.+.+ .+..+
T Consensus 2 ~i~~~~F~-~~~~l~~i~~~~-~~~~-----I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i 72 (129)
T PF13306_consen 2 SIGNNAFY-NCSNLESITFPN-TIKK-----IGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSI 72 (129)
T ss_dssp EE-TTTTT-T-TT--EEEETS-T--E-----E-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE
T ss_pred EECHHHHh-CCCCCCEEEECC-CeeE-----eChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccc
Confidence 45666775 456777777764 2332 44456777777777777664 6777777777777777777755 56666
Q ss_pred CCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCc
Q psy16110 258 PSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIH 317 (719)
Q Consensus 258 ~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 317 (719)
+...|..+++|+.+++..+ +..+....|.++ +|+.+.+.. .+..+...+|.++++|+
T Consensus 73 ~~~~F~~~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l~ 129 (129)
T PF13306_consen 73 GDNAFSNCTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKLK 129 (129)
T ss_dssp -TTTTTT-TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG------
T ss_pred ccccccccccccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccCC
Confidence 6666777777777777654 666666667666 777777665 55666666777766653
No 48
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.33 E-value=5.7e-08 Score=92.51 Aligned_cols=168 Identities=18% Similarity=0.134 Sum_probs=88.5
Q ss_pred cCCCCccEEEccCCcCCCCChhhh-------------cCCCCCCEEeCCCCcccccc----CCccCCCCCCCEEEccCCc
Q psy16110 493 DELLNLKYLCLAHNHLTEIPEMMF-------------KNLLNLTYLDLSNNNIVNLR----VGSLYGLPSMKRLDLSFNK 555 (719)
Q Consensus 493 ~~~~~L~~L~L~~n~l~~~~~~~~-------------~~l~~L~~L~Ls~n~i~~~~----~~~l~~l~~L~~L~L~~n~ 555 (719)
++.+.|++|.+.+|.+..+....+ .+-|.|+++....|++..-. ...+.....|+++.+..|.
T Consensus 117 s~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk~vki~qNg 196 (388)
T COG5238 117 SSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESHENLKEVKIQQNG 196 (388)
T ss_pred hcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhhcCceeEEeeecC
Confidence 344555555565555543332211 23356666666666654321 1223344567777777776
Q ss_pred CCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcC----cCcccCCCCccEEEcCCCCCCCcChhhh------cCCCCCCE
Q psy16110 556 LTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLF----PSSFTIHSKLKTLKLAFNKFNYFPKELI------LGLSYLQE 625 (719)
Q Consensus 556 l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~~~~~l------~~l~~L~~ 625 (719)
+..-....+.-..+..+.+|++|||.+|.++... ..++..|+.|++|.+..|-++.-....+ ...++|..
T Consensus 197 Irpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~ 276 (388)
T COG5238 197 IRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMP 276 (388)
T ss_pred cCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccc
Confidence 5421111111111224577888888888776442 2345567778888888887765333221 12356777
Q ss_pred EECCCCCCcc-cC------cccCCCCCCCCEEeCCCCcCCCC
Q psy16110 626 IDLSNNQLKT-ID------DYDYGYLPRLRKLNLNNNNIDAI 660 (719)
Q Consensus 626 L~Ls~n~l~~-~~------~~~l~~l~~L~~L~Ls~N~l~~~ 660 (719)
|-..+|.+.+ +. ...=.++|-|..|.+.+|+++..
T Consensus 277 L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E~ 318 (388)
T COG5238 277 LPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKEL 318 (388)
T ss_pred cccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchhH
Confidence 7777775542 11 11113456666666666666554
No 49
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.28 E-value=1.3e-07 Score=90.08 Aligned_cols=193 Identities=18% Similarity=0.102 Sum_probs=124.5
Q ss_pred hhcCCCCCCEEeCCCCccccccCC----ccCCCCCCCEEEccCCcCCcccCCcCC--------CCCCCCCCCCcEEECcC
Q psy16110 515 MFKNLLNLTYLDLSNNNIVNLRVG----SLYGLPSMKRLDLSFNKLTTFKGDYFN--------TKSKPNTSSLEELNLNN 582 (719)
Q Consensus 515 ~~~~l~~L~~L~Ls~n~i~~~~~~----~l~~l~~L~~L~L~~n~l~~~~~~~~~--------~~~~~~l~~L~~L~Ls~ 582 (719)
++-.|+.|+..++|+|.+....|. .++..+.|++|.+++|.+..+.+.-+. ......-|.|++.+...
T Consensus 87 aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgr 166 (388)
T COG5238 87 ALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGR 166 (388)
T ss_pred HHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEecc
Confidence 345667777777777766654443 234556777777777776655443221 00112337788888888
Q ss_pred CCCCCcCc----CcccCCCCccEEEcCCCCCCCc-----ChhhhcCCCCCCEEECCCCCCccc----CcccCCCCCCCCE
Q psy16110 583 NELTYLFP----SSFTIHSKLKTLKLAFNKFNYF-----PKELILGLSYLQEIDLSNNQLKTI----DDYDYGYLPRLRK 649 (719)
Q Consensus 583 n~l~~~~~----~~~~~l~~L~~L~L~~n~l~~~-----~~~~l~~l~~L~~L~Ls~n~l~~~----~~~~l~~l~~L~~ 649 (719)
|++..-.. ..+.....|+++.+..|.|..- ....+..+.+|++|||.+|.++-. ....+...+.|+.
T Consensus 167 NRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrE 246 (388)
T COG5238 167 NRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRE 246 (388)
T ss_pred chhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhh
Confidence 88764421 2344457899999999877632 222345578999999999988742 2334555677999
Q ss_pred EeCCCCcCCCCCcccC------CCCCCCcEEECCCCcCC-----C--cChHhhcCcccc-EEecCCCceeee
Q psy16110 650 LNLNNNNIDAISETCF------FNSSQLQIINLSFNRLE-----K--LPERLFNTFLYT-NYDMAPNLVFQS 707 (719)
Q Consensus 650 L~Ls~N~l~~~~~~~~------~~l~~L~~L~Ls~N~l~-----~--i~~~~~~~l~~L-~L~l~~N~l~~~ 707 (719)
|.+.+|-++......+ ...|+|+.|-..+|.+. . ++.-.-.+++-| .+-+.||++.+.
T Consensus 247 L~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E~ 318 (388)
T COG5238 247 LRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKEL 318 (388)
T ss_pred ccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchhH
Confidence 9999998876543221 22578999999999553 2 232222467788 888999998663
No 50
>KOG2982|consensus
Probab=98.21 E-value=2e-07 Score=90.00 Aligned_cols=39 Identities=26% Similarity=0.381 Sum_probs=17.8
Q ss_pred CCccCEEEccCCCCcccC--cccccCcccCcEEEcCCCCCC
Q psy16110 289 QRWLERIILRGNRLTTIE--GGAFNGLAKIHILNLGYNRLN 327 (719)
Q Consensus 289 l~~L~~L~Ls~n~i~~~~--~~~~~~l~~L~~L~L~~n~l~ 327 (719)
.+.++.+||.+|.|++.. ...+.+++.|+.|+++.|++.
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~ 110 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLS 110 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCC
Confidence 344455555555544322 112344555555555555544
No 51
>KOG1644|consensus
Probab=98.19 E-value=3e-06 Score=77.79 Aligned_cols=106 Identities=17% Similarity=0.198 Sum_probs=52.0
Q ss_pred cCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccC-cccccCcccCcEEEc
Q psy16110 243 NLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIE-GGAFNGLAKIHILNL 321 (719)
Q Consensus 243 ~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~L 321 (719)
....+||++|.+..++. |..++.|.+|.+++|+|+.+.+.--.-+++|..|.+.+|.|..+. -..+..+++|++|.+
T Consensus 43 ~~d~iDLtdNdl~~l~~--lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKLDN--LPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccceecccccchhhccc--CCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 34445555555554442 445555555555555555555443334455555555555554332 122445555666666
Q ss_pred CCCCCCCcCCCccccccccCCCCCCEEeCCC
Q psy16110 322 GYNRLNKLNSDTFQGGAFNGLAKIHILNLGY 352 (719)
Q Consensus 322 ~~n~l~~~~~~~~~~~~l~~l~~L~~L~L~~ 352 (719)
-+|+++.....-.. .+..+++|+.||+++
T Consensus 121 l~Npv~~k~~YR~y--vl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 121 LGNPVEHKKNYRLY--VLYKLPSLRTLDFQK 149 (233)
T ss_pred cCCchhcccCceeE--EEEecCcceEeehhh
Confidence 55555443222111 344455556555544
No 52
>KOG4579|consensus
Probab=98.19 E-value=1.5e-07 Score=80.43 Aligned_cols=111 Identities=24% Similarity=0.284 Sum_probs=94.0
Q ss_pred CccEEEcCCCCCCCcCh--hhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEE
Q psy16110 598 KLKTLKLAFNKFNYFPK--ELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIIN 675 (719)
Q Consensus 598 ~L~~L~L~~n~l~~~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 675 (719)
.+..++|+.|++..++. ..+.....|+.++|++|.+...++..-..++.++.|++++|.|++++.+ +..++.|+.|+
T Consensus 28 E~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE-~Aam~aLr~lN 106 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEE-LAAMPALRSLN 106 (177)
T ss_pred HhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHH-HhhhHHhhhcc
Confidence 46678899999887654 2345567888899999999998886666778999999999999999988 99999999999
Q ss_pred CCCCcCCCcChHhhcCcccc-EEecCCCceeeeccC
Q psy16110 676 LSFNRLEKLPERLFNTFLYT-NYDMAPNLVFQSHLS 710 (719)
Q Consensus 676 Ls~N~l~~i~~~~~~~l~~L-~L~l~~N~l~~~~~~ 710 (719)
++.|++...|.-++. +.++ +|+..+|.....+..
T Consensus 107 l~~N~l~~~p~vi~~-L~~l~~Lds~~na~~eid~d 141 (177)
T KOG4579|consen 107 LRFNPLNAEPRVIAP-LIKLDMLDSPENARAEIDVD 141 (177)
T ss_pred cccCccccchHHHHH-HHhHHHhcCCCCccccCcHH
Confidence 999999998886665 9999 999999998776543
No 53
>KOG1644|consensus
Probab=98.18 E-value=2.8e-06 Score=77.92 Aligned_cols=105 Identities=22% Similarity=0.270 Sum_probs=57.5
Q ss_pred ccEEEcCCCCccccCcccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccCc
Q psy16110 166 IRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLL 245 (719)
Q Consensus 166 L~~L~Ls~n~i~~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 245 (719)
=+.++|.+.++..+..-- ........+||++|.+.. ...|..++.|.+|.|++|+|+.+.+..-..+++|+
T Consensus 21 e~e~~LR~lkip~ienlg--~~~d~~d~iDLtdNdl~~-------l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~ 91 (233)
T KOG1644|consen 21 ERELDLRGLKIPVIENLG--ATLDQFDAIDLTDNDLRK-------LDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLK 91 (233)
T ss_pred ccccccccccccchhhcc--ccccccceecccccchhh-------cccCCCccccceEEecCCcceeeccchhhhccccc
Confidence 577888888877665411 123456666666666543 13455566666666666666666665444455566
Q ss_pred EEECCCCcCCcCCCC-CCCCCCCCcEEEcCCCcCc
Q psy16110 246 ELRMDHNRFTSIPSV-SLNGPRALRILSMAYNRIG 279 (719)
Q Consensus 246 ~L~L~~n~l~~i~~~-~l~~l~~L~~L~Ls~n~i~ 279 (719)
.|.|.+|+|.++.+. -+..+++|++|.+-+|.++
T Consensus 92 ~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~Npv~ 126 (233)
T KOG1644|consen 92 TLILTNNSIQELGDLDPLASCPKLEYLTLLGNPVE 126 (233)
T ss_pred eEEecCcchhhhhhcchhccCCccceeeecCCchh
Confidence 666666655543221 1333444444444444443
No 54
>KOG2982|consensus
Probab=98.16 E-value=7.9e-07 Score=86.02 Aligned_cols=206 Identities=23% Similarity=0.219 Sum_probs=100.1
Q ss_pred CccEEEcCCCCCCCCCch-hh-cCCCCccEEEccCCcCCCCCh--hhhcCCCCCCEEeCCCCccccccCCccCCCCCCCE
Q psy16110 473 KLEVLDLAATGLKSIPQY-QF-DELLNLKYLCLAHNHLTEIPE--MMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKR 548 (719)
Q Consensus 473 ~L~~L~ls~n~l~~~~~~-~~-~~~~~L~~L~L~~n~l~~~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~ 548 (719)
.++.+.+.++.|..+... .| ..++.++.++|.+|.++.... ..+.++|.|+.|+++.|++...+...-....+|++
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~ 125 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRV 125 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEE
Confidence 445566666666554321 12 235667788888887775433 23567788888888888776543221134567777
Q ss_pred EEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcC--cCcccC-CCCccEEEcCCCCCCCcCh--hhhcCCCCC
Q psy16110 549 LDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLF--PSSFTI-HSKLKTLKLAFNKFNYFPK--ELILGLSYL 623 (719)
Q Consensus 549 L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~--~~~~~~-l~~L~~L~L~~n~l~~~~~--~~l~~l~~L 623 (719)
|.|.+..+.--... ..+..++.+++|.+|.|.+.... ....+. -+.+++|+.-.|....... ..-.-++++
T Consensus 126 lVLNgT~L~w~~~~----s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv 201 (418)
T KOG2982|consen 126 LVLNGTGLSWTQST----SSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNV 201 (418)
T ss_pred EEEcCCCCChhhhh----hhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccc
Confidence 77777654411111 11234566666767666432220 111111 1244444444442211000 001123445
Q ss_pred CEEECCCCCCcccC-cccCCCCCCCCEEeCCCCcCCCC-CcccCCCCCCCcEEECCCCcCC
Q psy16110 624 QEIDLSNNQLKTID-DYDYGYLPRLRKLNLNNNNIDAI-SETCFFNSSQLQIINLSFNRLE 682 (719)
Q Consensus 624 ~~L~Ls~n~l~~~~-~~~l~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~ 682 (719)
..+-+..|.+.+.. ...++.+|.+.-|+|+.|+|... .-..+..+++|..|.+++|++.
T Consensus 202 ~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 202 NSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred hheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 55555555544322 22344445555555555555442 1223444555555555555554
No 55
>KOG2120|consensus
Probab=98.15 E-value=4.5e-08 Score=94.40 Aligned_cols=84 Identities=30% Similarity=0.343 Sum_probs=38.1
Q ss_pred cccCCCccEEECCCCCCcCcCC----cchhccCCEEEccCCcc----cccccCccCCCCccEEEccCCC-CCCcCccccc
Q psy16110 374 FQDFQKLKSLDLNGNFLINLES----TGLEDTLDNLNVRDNQI----TTLSSSALNYKLLTKLDLSHNN-LKELEPTAFT 444 (719)
Q Consensus 374 l~~~~~L~~L~L~~n~l~~~~~----~~~~~~L~~L~l~~n~l----~~~~~~~~~~~~L~~L~Ls~n~-l~~~~~~~~~ 444 (719)
+.+++.|..|++++|.+..-.. ...-+.|+.|+++++.- ..+..-...+|+|..|||++|. ++.-....|.
T Consensus 256 ~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~ 335 (419)
T KOG2120|consen 256 LSSCSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF 335 (419)
T ss_pred HHhhhhHhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHH
Confidence 3345555555555553332111 12224555566655431 1111111226666666666653 2222223445
Q ss_pred CCCcCcEEeCcCC
Q psy16110 445 NVPTLLHLNLSRN 457 (719)
Q Consensus 445 ~l~~L~~L~L~~n 457 (719)
+++.|++|.++.|
T Consensus 336 kf~~L~~lSlsRC 348 (419)
T KOG2120|consen 336 KFNYLQHLSLSRC 348 (419)
T ss_pred hcchheeeehhhh
Confidence 5666666666665
No 56
>KOG2120|consensus
Probab=98.15 E-value=3.1e-08 Score=95.55 Aligned_cols=133 Identities=24% Similarity=0.203 Sum_probs=71.5
Q ss_pred ccCCCCCCEEeCCCCCCCccccccccCcccccccccccCCCccEEECCCC-CCcCcCC---cchhccCCEEEccCCcccc
Q psy16110 339 FNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGN-FLINLES---TGLEDTLDNLNVRDNQITT 414 (719)
Q Consensus 339 l~~l~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~~n-~l~~~~~---~~~~~~L~~L~l~~n~l~~ 414 (719)
+..+.+|+.|.+.++++. ..+...+.+..+|+.|+++.+ .++.... +..+..|.+|++++|.+..
T Consensus 206 Ls~C~kLk~lSlEg~~Ld-----------D~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~ 274 (419)
T KOG2120|consen 206 LSQCSKLKNLSLEGLRLD-----------DPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFT 274 (419)
T ss_pred HHHHHhhhhccccccccC-----------cHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccc
Confidence 445566666666666552 233344555667777777776 3444332 4456778888888887653
Q ss_pred cccC-cc-C-CCCccEEEccCCCCC---CcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCCC
Q psy16110 415 LSSS-AL-N-YKLLTKLDLSHNNLK---ELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAAT 482 (719)
Q Consensus 415 ~~~~-~~-~-~~~L~~L~Ls~n~l~---~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n 482 (719)
-.-. +. . -++|+.|+++++.-. .-.......+++|.+|||++|..++.--...|..++.|++|.++.|
T Consensus 275 ~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRC 348 (419)
T KOG2120|consen 275 EKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRC 348 (419)
T ss_pred hhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhh
Confidence 2211 11 1 466778888776321 1111223567777777777764443321222333444455544444
No 57
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.99 E-value=5.5e-06 Score=57.55 Aligned_cols=39 Identities=31% Similarity=0.472 Sum_probs=21.5
Q ss_pred CCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCcCCCcC
Q psy16110 646 RLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLP 685 (719)
Q Consensus 646 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~ 685 (719)
+|++|++++|+|+.+++ .+.++++|+.|++++|++++++
T Consensus 2 ~L~~L~l~~N~i~~l~~-~l~~l~~L~~L~l~~N~i~~i~ 40 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPP-ELSNLPNLETLNLSNNPISDIS 40 (44)
T ss_dssp T-SEEEETSSS-SSHGG-HGTTCTTSSEEEETSSCCSBEG
T ss_pred cceEEEccCCCCcccCc-hHhCCCCCCEEEecCCCCCCCc
Confidence 45666666666665544 2555666666666666665554
No 58
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.84 E-value=1.1e-05 Score=55.97 Aligned_cols=38 Identities=34% Similarity=0.564 Sum_probs=17.1
Q ss_pred CccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCccc
Q psy16110 598 KLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTI 636 (719)
Q Consensus 598 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~ 636 (719)
+|++|++++|+++.+++. ++++++|+.|++++|+++.+
T Consensus 2 ~L~~L~l~~N~i~~l~~~-l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPE-LSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp T-SEEEETSSS-SSHGGH-GTTCTTSSEEEETSSCCSBE
T ss_pred cceEEEccCCCCcccCch-HhCCCCCCEEEecCCCCCCC
Confidence 344555555555544432 44445555555555544433
No 59
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.82 E-value=8.3e-05 Score=77.68 Aligned_cols=135 Identities=15% Similarity=0.210 Sum_probs=82.6
Q ss_pred cCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCC-cCCcccCCcCCCCCCCC
Q psy16110 493 DELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFN-KLTTFKGDYFNTKSKPN 571 (719)
Q Consensus 493 ~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n-~l~~~~~~~~~~~~~~~ 571 (719)
..+..++.|++++|.++.+|. + ..+|++|.+++|.--...|..+ .++|++|++++| .+..++
T Consensus 49 ~~~~~l~~L~Is~c~L~sLP~--L--P~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~sLP----------- 111 (426)
T PRK15386 49 EEARASGRLYIKDCDIESLPV--L--PNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEISGLP----------- 111 (426)
T ss_pred HHhcCCCEEEeCCCCCcccCC--C--CCCCcEEEccCCCCcccCCchh--hhhhhheEccCcccccccc-----------
Confidence 346788899999998888872 2 3579999998754433334433 257888888887 444322
Q ss_pred CCCCcEEECcCCCCCCcCcCcccC-CCCccEEEcCCCC-CC--CcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCC
Q psy16110 572 TSSLEELNLNNNELTYLFPSSFTI-HSKLKTLKLAFNK-FN--YFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRL 647 (719)
Q Consensus 572 l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~n~-l~--~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L 647 (719)
.+|+.|+++.+....+ .. .++|++|.+.+++ .. .++ .. -.++|++|++++|....+++ .+. .+|
T Consensus 112 -~sLe~L~L~~n~~~~L-----~~LPssLk~L~I~~~n~~~~~~lp-~~--LPsSLk~L~Is~c~~i~LP~-~LP--~SL 179 (426)
T PRK15386 112 -ESVRSLEIKGSATDSI-----KNVPNGLTSLSINSYNPENQARID-NL--ISPSLKTLSLTGCSNIILPE-KLP--ESL 179 (426)
T ss_pred -cccceEEeCCCCCccc-----ccCcchHhheeccccccccccccc-cc--cCCcccEEEecCCCcccCcc-ccc--ccC
Confidence 4677788776554322 11 2457777775432 11 111 11 12578888888877654443 232 578
Q ss_pred CEEeCCCCc
Q psy16110 648 RKLNLNNNN 656 (719)
Q Consensus 648 ~~L~Ls~N~ 656 (719)
+.|+++.+.
T Consensus 180 k~L~ls~n~ 188 (426)
T PRK15386 180 QSITLHIEQ 188 (426)
T ss_pred cEEEecccc
Confidence 888887764
No 60
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.81 E-value=8.6e-05 Score=77.57 Aligned_cols=135 Identities=21% Similarity=0.245 Sum_probs=88.9
Q ss_pred CCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCC-cCCCCChhhhcCCCCCCEEeCCCC-ccccccCCccCCCCCCC
Q psy16110 470 PLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHN-HLTEIPEMMFKNLLNLTYLDLSNN-NIVNLRVGSLYGLPSMK 547 (719)
Q Consensus 470 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~Ls~n-~i~~~~~~~l~~l~~L~ 547 (719)
.+.+++.|++++|.++.+|. -..+|+.|.+++| .++.++.. + .++|++|++++| .+..+ | ++|+
T Consensus 50 ~~~~l~~L~Is~c~L~sLP~----LP~sLtsL~Lsnc~nLtsLP~~-L--P~nLe~L~Ls~Cs~L~sL-P------~sLe 115 (426)
T PRK15386 50 EARASGRLYIKDCDIESLPV----LPNELTEITIENCNNLTTLPGS-I--PEGLEKLTVCHCPEISGL-P------ESVR 115 (426)
T ss_pred HhcCCCEEEeCCCCCcccCC----CCCCCcEEEccCCCCcccCCch-h--hhhhhheEccCccccccc-c------cccc
Confidence 35788999999998888872 2347999999885 56666643 2 368999999988 44432 2 3588
Q ss_pred EEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCC-CCCc-CcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCE
Q psy16110 548 RLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNE-LTYL-FPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQE 625 (719)
Q Consensus 548 ~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~-l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 625 (719)
.|++..+....+. .+. ++|+.|.+.+++ .... .+. .-.++|++|++++|.....|.. +. .+|+.
T Consensus 116 ~L~L~~n~~~~L~--~LP-------ssLk~L~I~~~n~~~~~~lp~--~LPsSLk~L~Is~c~~i~LP~~-LP--~SLk~ 181 (426)
T PRK15386 116 SLEIKGSATDSIK--NVP-------NGLTSLSINSYNPENQARIDN--LISPSLKTLSLTGCSNIILPEK-LP--ESLQS 181 (426)
T ss_pred eEEeCCCCCcccc--cCc-------chHhheecccccccccccccc--ccCCcccEEEecCCCcccCccc-cc--ccCcE
Confidence 8888776654332 111 568888875433 1111 111 1236899999999887665543 33 68999
Q ss_pred EECCCCC
Q psy16110 626 IDLSNNQ 632 (719)
Q Consensus 626 L~Ls~n~ 632 (719)
|+++.+.
T Consensus 182 L~ls~n~ 188 (426)
T PRK15386 182 ITLHIEQ 188 (426)
T ss_pred EEecccc
Confidence 9998764
No 61
>KOG4341|consensus
Probab=97.79 E-value=5.3e-07 Score=91.32 Aligned_cols=134 Identities=22% Similarity=0.153 Sum_probs=75.6
Q ss_pred CCCccEEEccCCCC-CCcCcccc-cCCCcCcEEeCcCCCCCCCCCCCCCC-CCCCccEEEcCCCCCCCCC--chhhcCCC
Q psy16110 422 YKLLTKLDLSHNNL-KELEPTAF-TNVPTLLHLNLSRNAHLSSLPVGGFD-PLKKLEVLDLAATGLKSIP--QYQFDELL 496 (719)
Q Consensus 422 ~~~L~~L~Ls~n~l-~~~~~~~~-~~l~~L~~L~L~~n~~l~~l~~~~~~-~l~~L~~L~ls~n~l~~~~--~~~~~~~~ 496 (719)
+..|+.|+.+++.- +...-+++ .++++|+.+.++.+..++......+. +++.|+.+++..+....-. ...-.+++
T Consensus 293 c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~ 372 (483)
T KOG4341|consen 293 CHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCP 372 (483)
T ss_pred hhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCc
Confidence 66677777776643 22222223 35678888888888766665543332 4677888887777443211 11223567
Q ss_pred CccEEEccCCcCC-CCC----hhhhcCCCCCCEEeCCCCccc-cccCCccCCCCCCCEEEccCCc
Q psy16110 497 NLKYLCLAHNHLT-EIP----EMMFKNLLNLTYLDLSNNNIV-NLRVGSLYGLPSMKRLDLSFNK 555 (719)
Q Consensus 497 ~L~~L~L~~n~l~-~~~----~~~~~~l~~L~~L~Ls~n~i~-~~~~~~l~~l~~L~~L~L~~n~ 555 (719)
.|+.+.+++|... ... ...-..+..|+.+.+++++.. +.....+..+++|+.+++.+++
T Consensus 373 ~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 373 RLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred hhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 7777777777432 211 111134556677777776543 2333445556666666666554
No 62
>KOG4341|consensus
Probab=97.60 E-value=3e-06 Score=85.95 Aligned_cols=207 Identities=20% Similarity=0.095 Sum_probs=91.1
Q ss_pred cCCCcCcEEeCcCCCCCCCCCCC-CCCCCCCccEEEcCCCCCCCCCchhh----cCCCCccEEEccCC-cCCCCCh-hhh
Q psy16110 444 TNVPTLLHLNLSRNAHLSSLPVG-GFDPLKKLEVLDLAATGLKSIPQYQF----DELLNLKYLCLAHN-HLTEIPE-MMF 516 (719)
Q Consensus 444 ~~l~~L~~L~L~~n~~l~~l~~~-~~~~l~~L~~L~ls~n~l~~~~~~~~----~~~~~L~~L~L~~n-~l~~~~~-~~~ 516 (719)
.++++|++++++.++.+..-... .+.++..++.+...+|.-. +.+.+ ..+.-+..+++.+| .+++... ..-
T Consensus 213 ~gC~kL~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~--~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~ 290 (483)
T KOG4341|consen 213 EGCRKLKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLEL--ELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIA 290 (483)
T ss_pred HhhhhHHHhhhccCchhhcCcchHHhccchhhhhhhhcccccc--cHHHHHHHhccChHhhccchhhhccccchHHHHHh
Confidence 35566666666666555441111 1234445555555544211 11111 23344555555555 2332221 111
Q ss_pred cCCCCCCEEeCCCCcc-ccccC-CccCCCCCCCEEEccCCc-CCcccCCcCCCCCCCCCCCCcEEECcCCCCCCc--CcC
Q psy16110 517 KNLLNLTYLDLSNNNI-VNLRV-GSLYGLPSMKRLDLSFNK-LTTFKGDYFNTKSKPNTSSLEELNLNNNELTYL--FPS 591 (719)
Q Consensus 517 ~~l~~L~~L~Ls~n~i-~~~~~-~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~--~~~ 591 (719)
..+..|++|+.+++.- ++..- .--.+.++|+.|.+++++ +++.....+. .+++.|+.+++..+..... +..
T Consensus 291 ~~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~----rn~~~Le~l~~e~~~~~~d~tL~s 366 (483)
T KOG4341|consen 291 CGCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLG----RNCPHLERLDLEECGLITDGTLAS 366 (483)
T ss_pred hhhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhh----cCChhhhhhcccccceehhhhHhh
Confidence 3456667777766532 22111 112345677777777664 2222211111 2456666666666543322 111
Q ss_pred cccCCCCccEEEcCCCCCC-CcC----hhhhcCCCCCCEEECCCCCCcc-cCcccCCCCCCCCEEeCCCCc
Q psy16110 592 SFTIHSKLKTLKLAFNKFN-YFP----KELILGLSYLQEIDLSNNQLKT-IDDYDYGYLPRLRKLNLNNNN 656 (719)
Q Consensus 592 ~~~~l~~L~~L~L~~n~l~-~~~----~~~l~~l~~L~~L~Ls~n~l~~-~~~~~l~~l~~L~~L~Ls~N~ 656 (719)
.-.+++.|+++.++++... ... ...-.....|+++.+++++... -.-..+..+++|+.+++-+++
T Consensus 367 ls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 367 LSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred hccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 1224566666666655322 110 0011223455556666554431 112234445555555555443
No 63
>KOG2123|consensus
Probab=97.37 E-value=5.2e-06 Score=79.76 Aligned_cols=104 Identities=18% Similarity=0.250 Sum_probs=58.2
Q ss_pred ccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCc-ccccCcccCcEEE
Q psy16110 242 DNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEG-GAFNGLAKIHILN 320 (719)
Q Consensus 242 ~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~ 320 (719)
.+.+.|+..+|.++.|. ....++.|++|.||-|.|+.+.+ +..|++|+.|+|..|.|.++.. .-+.++++|+.|.
T Consensus 19 ~~vkKLNcwg~~L~DIs--ic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LW 94 (388)
T KOG2123|consen 19 ENVKKLNCWGCGLDDIS--ICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLW 94 (388)
T ss_pred HHhhhhcccCCCccHHH--HHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHh
Confidence 34455555566555554 24556666666666666666644 5666666666666666665542 2345666666666
Q ss_pred cCCCCCCCcCCCccccccccCCCCCCEEe
Q psy16110 321 LGYNRLNKLNSDTFQGGAFNGLAKIHILN 349 (719)
Q Consensus 321 L~~n~l~~~~~~~~~~~~l~~l~~L~~L~ 349 (719)
|..|+-.+-.........+..+++|+.||
T Consensus 95 L~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 95 LDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hccCCcccccchhHHHHHHHHcccchhcc
Confidence 66665544333222222344456666554
No 64
>KOG3665|consensus
Probab=97.35 E-value=8.5e-05 Score=84.29 Aligned_cols=105 Identities=26% Similarity=0.363 Sum_probs=43.7
Q ss_pred cccEEEcCCCCcc--ccCcccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCc
Q psy16110 165 PIRRLDFSGNALR--RLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCD 242 (719)
Q Consensus 165 ~L~~L~Ls~n~i~--~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 242 (719)
+|++||++|...- ..+.... ..+|+|+.|.+++-.+...- + .....++++|..||+|+.+++.+ ..++.++
T Consensus 123 nL~~LdI~G~~~~s~~W~~kig-~~LPsL~sL~i~~~~~~~~d---F-~~lc~sFpNL~sLDIS~TnI~nl--~GIS~Lk 195 (699)
T KOG3665|consen 123 NLQHLDISGSELFSNGWPKKIG-TMLPSLRSLVISGRQFDNDD---F-SQLCASFPNLRSLDISGTNISNL--SGISRLK 195 (699)
T ss_pred hhhhcCccccchhhccHHHHHh-hhCcccceEEecCceecchh---H-HHHhhccCccceeecCCCCccCc--HHHhccc
Confidence 4566666554321 2222222 23455555555544332200 0 01233455555555555555544 2244455
Q ss_pred cCcEEECCCCcCCcCC-CCCCCCCCCCcEEEcCCC
Q psy16110 243 NLLELRMDHNRFTSIP-SVSLNGPRALRILSMAYN 276 (719)
Q Consensus 243 ~L~~L~L~~n~l~~i~-~~~l~~l~~L~~L~Ls~n 276 (719)
+|+.|.+.+=.+..-. -..+.++++|++||+|..
T Consensus 196 nLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~ 230 (699)
T KOG3665|consen 196 NLQVLSMRNLEFESYQDLIDLFNLKKLRVLDISRD 230 (699)
T ss_pred cHHHHhccCCCCCchhhHHHHhcccCCCeeecccc
Confidence 5555554443333211 001334445555555443
No 65
>KOG3665|consensus
Probab=97.23 E-value=0.00013 Score=82.73 Aligned_cols=133 Identities=14% Similarity=0.143 Sum_probs=70.1
Q ss_pred ccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccC-cCccCCCccCcEEECCCCcCCcCCCCCCCCCCC
Q psy16110 189 DTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIE-EGILKGCDNLLELRMDHNRFTSIPSVSLNGPRA 267 (719)
Q Consensus 189 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~~ 267 (719)
.+|++|++++...-.. .+...--..+|+|++|.+++-.+..-. ...+.++++|..||+|+++++.+. .++.+++
T Consensus 122 ~nL~~LdI~G~~~~s~---~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl~--GIS~Lkn 196 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSN---GWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNLS--GISRLKN 196 (699)
T ss_pred HhhhhcCccccchhhc---cHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCcH--HHhcccc
Confidence 4677777776543211 011111234677777777765543321 123456677777777777777663 3667777
Q ss_pred CcEEEcCCCcCcccC-CCcccCCCccCEEEccCCCCcccC------cccccCcccCcEEEcCCCCC
Q psy16110 268 LRILSMAYNRIGTLK-ADSFLSQRWLERIILRGNRLTTIE------GGAFNGLAKIHILNLGYNRL 326 (719)
Q Consensus 268 L~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~------~~~~~~l~~L~~L~L~~n~l 326 (719)
|++|.+.+=.+..-. -..+.++++|+.||+|........ -+.-..+++|+.||.+++.+
T Consensus 197 Lq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi 262 (699)
T KOG3665|consen 197 LQVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDI 262 (699)
T ss_pred HHHHhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcch
Confidence 777766655544311 123455666777776655433221 00112355555555554443
No 66
>KOG2123|consensus
Probab=96.97 E-value=1.5e-05 Score=76.72 Aligned_cols=100 Identities=28% Similarity=0.346 Sum_probs=57.6
Q ss_pred CCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCCcCCCCCh-hhhcCCCCCCE
Q psy16110 446 VPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPE-MMFKNLLNLTY 524 (719)
Q Consensus 446 l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~ 524 (719)
+.+.++|+.-+| .+.+|.. ...++.|++|.|+-|+|+.+.+ +..|++|+.|+|..|.|.++.. ..+.++++|+.
T Consensus 18 l~~vkKLNcwg~-~L~DIsi--c~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVKKLNCWGC-GLDDISI--CEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhhhhcccCC-CccHHHH--HHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 345566666666 5555442 3456667777777776666653 5566677777777776666554 23456666666
Q ss_pred EeCCCCccccccCC-----ccCCCCCCCEEE
Q psy16110 525 LDLSNNNIVNLRVG-----SLYGLPSMKRLD 550 (719)
Q Consensus 525 L~Ls~n~i~~~~~~-----~l~~l~~L~~L~ 550 (719)
|+|..|+-.+..+. .+.-+|+|++|+
T Consensus 93 LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 93 LWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred HhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 66666654443221 233455555554
No 67
>KOG2739|consensus
Probab=96.82 E-value=0.0007 Score=65.31 Aligned_cols=62 Identities=24% Similarity=0.258 Sum_probs=25.5
Q ss_pred CCCCCCEEECCCC--CCcccCcccCCCCCCCCEEeCCCCcCCCCC-cccCCCCCCCcEEECCCCc
Q psy16110 619 GLSYLQEIDLSNN--QLKTIDDYDYGYLPRLRKLNLNNNNIDAIS-ETCFFNSSQLQIINLSFNR 680 (719)
Q Consensus 619 ~l~~L~~L~Ls~n--~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~ 680 (719)
.++.|+.|+++.| ++.+-.......+|+|+++++++|+|+.+. -..+..+.+|..||+.+|.
T Consensus 63 ~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl~n~~ 127 (260)
T KOG2739|consen 63 KLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKSLDLFNCS 127 (260)
T ss_pred CcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchhhhhcccCC
Confidence 3444555555555 222211112233455555555555544321 0123334445555555543
No 68
>KOG2739|consensus
Probab=96.73 E-value=0.0007 Score=65.33 Aligned_cols=39 Identities=18% Similarity=0.254 Sum_probs=16.7
Q ss_pred CccCEEEccCCCCcccC-cccccCcccCcEEEcCCCCCCC
Q psy16110 290 RWLERIILRGNRLTTIE-GGAFNGLAKIHILNLGYNRLNK 328 (719)
Q Consensus 290 ~~L~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~ 328 (719)
++|++|++++|+|..+. -..+..+.+|..|++.+|..+.
T Consensus 91 P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 91 PNLKVLNLSGNKIKDLSTLRPLKELENLKSLDLFNCSVTN 130 (260)
T ss_pred CceeEEeecCCccccccccchhhhhcchhhhhcccCCccc
Confidence 44555555555444221 1113334444555555554443
No 69
>KOG1947|consensus
Probab=96.17 E-value=0.00067 Score=75.43 Aligned_cols=62 Identities=29% Similarity=0.295 Sum_probs=31.2
Q ss_pred CCCccEEEcCCCC-CCCCCchhhcC-CCCccEEEccCCc-CCCCCh-hhhcCCCCCCEEeCCCCcc
Q psy16110 471 LKKLEVLDLAATG-LKSIPQYQFDE-LLNLKYLCLAHNH-LTEIPE-MMFKNLLNLTYLDLSNNNI 532 (719)
Q Consensus 471 l~~L~~L~ls~n~-l~~~~~~~~~~-~~~L~~L~L~~n~-l~~~~~-~~~~~l~~L~~L~Ls~n~i 532 (719)
+.+|+.++++++. ++......+.. +++|++|.+..+. +++..- .....+++|++|+++.+..
T Consensus 242 ~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~ 307 (482)
T KOG1947|consen 242 CRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHG 307 (482)
T ss_pred cCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCcc
Confidence 4555566666554 44433333332 5666666655554 332221 1234456666666666543
No 70
>KOG1947|consensus
Probab=95.95 E-value=0.0008 Score=74.83 Aligned_cols=191 Identities=23% Similarity=0.183 Sum_probs=102.1
Q ss_pred cCCCcCcEEeCcCCCCCCCCC-CCCCCCCCCccEEEcCCC-CC-CCCC---chhhcCCCCccEEEccCCc-CCCCChhhh
Q psy16110 444 TNVPTLLHLNLSRNAHLSSLP-VGGFDPLKKLEVLDLAAT-GL-KSIP---QYQFDELLNLKYLCLAHNH-LTEIPEMMF 516 (719)
Q Consensus 444 ~~l~~L~~L~L~~n~~l~~l~-~~~~~~l~~L~~L~ls~n-~l-~~~~---~~~~~~~~~L~~L~L~~n~-l~~~~~~~~ 516 (719)
..++.|+.+.+.++..+.... ......++.|+.|+++++ .. ...+ ......+++|+.|+++.+. +++..-..+
T Consensus 185 ~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l 264 (482)
T KOG1947|consen 185 SSCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSAL 264 (482)
T ss_pred hhCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHH
Confidence 347888888888886666532 122456788888888873 21 1111 1233456778888888876 554443333
Q ss_pred c-CCCCCCEEeCCCCc-cccccC-CccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcc
Q psy16110 517 K-NLLNLTYLDLSNNN-IVNLRV-GSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSF 593 (719)
Q Consensus 517 ~-~l~~L~~L~Ls~n~-i~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 593 (719)
. .+++|++|.+..+. +++..- .....+++|++|+++++.... ...+... ..++++++.|.+....
T Consensus 265 ~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~--d~~l~~~-~~~c~~l~~l~~~~~~--------- 332 (482)
T KOG1947|consen 265 ASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLT--DSGLEAL-LKNCPNLRELKLLSLN--------- 332 (482)
T ss_pred HhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccch--HHHHHHH-HHhCcchhhhhhhhcC---------
Confidence 3 37788888877666 444222 233456778888888765431 0101000 1124555554333221
Q ss_pred cCCCCccEEEcCCCCC---CCcChhhhcCCCCCCEEECCCCCCcccC-cccCCCCCCC
Q psy16110 594 TIHSKLKTLKLAFNKF---NYFPKELILGLSYLQEIDLSNNQLKTID-DYDYGYLPRL 647 (719)
Q Consensus 594 ~~l~~L~~L~L~~n~l---~~~~~~~l~~l~~L~~L~Ls~n~l~~~~-~~~l~~l~~L 647 (719)
.++.++.+.+.+... ..........++.++.+.+.++...... ...+.+++.|
T Consensus 333 -~c~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l 389 (482)
T KOG1947|consen 333 -GCPSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNL 389 (482)
T ss_pred -CCccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCccc
Confidence 134444444444322 1222233466778888888777644433 2344555555
No 71
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.68 E-value=0.0033 Score=36.24 Aligned_cols=21 Identities=33% Similarity=0.613 Sum_probs=12.8
Q ss_pred CCcEEECCCCcCCCcChHhhcC
Q psy16110 670 QLQIINLSFNRLEKLPERLFNT 691 (719)
Q Consensus 670 ~L~~L~Ls~N~l~~i~~~~~~~ 691 (719)
+|++|||++|+++.+|++ |++
T Consensus 1 ~L~~Ldls~n~l~~ip~~-~~~ 21 (22)
T PF00560_consen 1 NLEYLDLSGNNLTSIPSS-FSN 21 (22)
T ss_dssp TESEEEETSSEESEEGTT-TTT
T ss_pred CccEEECCCCcCEeCChh-hcC
Confidence 356666666666666665 443
No 72
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=95.07 E-value=0.022 Score=34.35 Aligned_cols=23 Identities=35% Similarity=0.524 Sum_probs=19.2
Q ss_pred CCCCcEEECCCCcCCCcChHhhc
Q psy16110 668 SSQLQIINLSFNRLEKLPERLFN 690 (719)
Q Consensus 668 l~~L~~L~Ls~N~l~~i~~~~~~ 690 (719)
+++|++|+|++|+++.+|+.+|.
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHcc
Confidence 46788899999999988888875
No 73
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=95.07 E-value=0.022 Score=34.35 Aligned_cols=23 Identities=35% Similarity=0.524 Sum_probs=19.2
Q ss_pred CCCCcEEECCCCcCCCcChHhhc
Q psy16110 668 SSQLQIINLSFNRLEKLPERLFN 690 (719)
Q Consensus 668 l~~L~~L~Ls~N~l~~i~~~~~~ 690 (719)
+++|++|+|++|+++.+|+.+|.
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHcc
Confidence 46788899999999988888875
No 74
>KOG4308|consensus
Probab=95.03 E-value=0.00012 Score=79.60 Aligned_cols=186 Identities=28% Similarity=0.286 Sum_probs=123.6
Q ss_pred CccEEEccCCcCCCCCh----hhhcCCCCCCEEeCCCCccccccC----CccCCC-CCCCEEEccCCcCCcccCCcCCCC
Q psy16110 497 NLKYLCLAHNHLTEIPE----MMFKNLLNLTYLDLSNNNIVNLRV----GSLYGL-PSMKRLDLSFNKLTTFKGDYFNTK 567 (719)
Q Consensus 497 ~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~Ls~n~i~~~~~----~~l~~l-~~L~~L~L~~n~l~~~~~~~~~~~ 567 (719)
.+..+.+.+|.+..-.. .++...+.|+.|++++|.+.+... ..+... ..+++|++..|.++.........
T Consensus 88 ~l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~- 166 (478)
T KOG4308|consen 88 SLLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAA- 166 (478)
T ss_pred hHHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHH-
Confidence 37888899998875443 346778899999999999885322 223332 56778888888887654432221
Q ss_pred CCCCCCCCcEEECcCCCCCCc----CcCcc----cCCCCccEEEcCCCCCCCcC----hhhhcCCCC-CCEEECCCCCCc
Q psy16110 568 SKPNTSSLEELNLNNNELTYL----FPSSF----TIHSKLKTLKLAFNKFNYFP----KELILGLSY-LQEIDLSNNQLK 634 (719)
Q Consensus 568 ~~~~l~~L~~L~Ls~n~l~~~----~~~~~----~~l~~L~~L~L~~n~l~~~~----~~~l~~l~~-L~~L~Ls~n~l~ 634 (719)
.+.....++.+|++.|.+... .+.++ ....++++|++++|.++... ...+...++ +..+++.+|.+.
T Consensus 167 ~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~ 246 (478)
T KOG4308|consen 167 VLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLG 246 (478)
T ss_pred HHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcc
Confidence 122358889999999987422 22233 34778888999988877422 223445555 777888888887
Q ss_pred ccC----cccCCCC-CCCCEEeCCCCcCCCCCc----ccCCCCCCCcEEECCCCcCCC
Q psy16110 635 TID----DYDYGYL-PRLRKLNLNNNNIDAISE----TCFFNSSQLQIINLSFNRLEK 683 (719)
Q Consensus 635 ~~~----~~~l~~l-~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~ 683 (719)
+.. ...+..+ ..++.++++.|.|++... ..+..++.++.+.+++|.+..
T Consensus 247 d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 247 DVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred hHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 542 1234444 577888888888877533 344567788888888888763
No 75
>KOG4308|consensus
Probab=94.97 E-value=0.00018 Score=78.19 Aligned_cols=208 Identities=23% Similarity=0.177 Sum_probs=138.8
Q ss_pred CccEEEcCCCCCCCCCc----hhhcCCCCccEEEccCCcCCCCChhh----hcCC-CCCCEEeCCCCcccccc----CCc
Q psy16110 473 KLEVLDLAATGLKSIPQ----YQFDELLNLKYLCLAHNHLTEIPEMM----FKNL-LNLTYLDLSNNNIVNLR----VGS 539 (719)
Q Consensus 473 ~L~~L~ls~n~l~~~~~----~~~~~~~~L~~L~L~~n~l~~~~~~~----~~~l-~~L~~L~Ls~n~i~~~~----~~~ 539 (719)
.+..+.+.+|.+..-.. ..+...+.|+.|++++|.+....... +... ..+++|++..|.++... ...
T Consensus 88 ~l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~ 167 (478)
T KOG4308|consen 88 SLLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAV 167 (478)
T ss_pred hHHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHH
Confidence 37888999998876443 35567889999999999988433322 2222 56778888888887643 345
Q ss_pred cCCCCCCCEEEccCCcCCcccCCcCCCC---CCCCCCCCcEEECcCCCCCCcC----cCcccCCCC-ccEEEcCCCCCCC
Q psy16110 540 LYGLPSMKRLDLSFNKLTTFKGDYFNTK---SKPNTSSLEELNLNNNELTYLF----PSSFTIHSK-LKTLKLAFNKFNY 611 (719)
Q Consensus 540 l~~l~~L~~L~L~~n~l~~~~~~~~~~~---~~~~l~~L~~L~Ls~n~l~~~~----~~~~~~l~~-L~~L~L~~n~l~~ 611 (719)
+.....++.++++.|.+........... .+....+++.|.+++|.++... ...+...+. ++++++.+|++..
T Consensus 168 L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d 247 (478)
T KOG4308|consen 168 LEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGD 247 (478)
T ss_pred HhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcch
Confidence 5567899999999998753221111110 0113478999999999987431 233455566 7889999999886
Q ss_pred cCh----hhhcCC-CCCCEEECCCCCCcccC----cccCCCCCCCCEEeCCCCcCCCCCc----ccCCCCCCCcEEECCC
Q psy16110 612 FPK----ELILGL-SYLQEIDLSNNQLKTID----DYDYGYLPRLRKLNLNNNNIDAISE----TCFFNSSQLQIINLSF 678 (719)
Q Consensus 612 ~~~----~~l~~l-~~L~~L~Ls~n~l~~~~----~~~l~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~ 678 (719)
... ..+..+ ..+++++++.|.|+.-. ...+..++.++++.+++|.+..... ........+..+-+.+
T Consensus 248 ~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~~~~~~~~~~l~~~~~~~~~~l~~ 327 (478)
T KOG4308|consen 248 VGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTDYGVELLLEALERKTPLLHLVLGG 327 (478)
T ss_pred HHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccccHHHHHHHHHhhhcccchhhhccc
Confidence 422 223444 67899999999998533 3345667899999999999876422 1223334555666665
Q ss_pred Cc
Q psy16110 679 NR 680 (719)
Q Consensus 679 N~ 680 (719)
+.
T Consensus 328 ~~ 329 (478)
T KOG4308|consen 328 TG 329 (478)
T ss_pred cC
Confidence 43
No 76
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=94.49 E-value=0.017 Score=33.25 Aligned_cols=16 Identities=44% Similarity=0.644 Sum_probs=6.8
Q ss_pred CCEEECcCCCCcccCc
Q psy16110 220 LRILDLSDNQIKAIEE 235 (719)
Q Consensus 220 L~~L~Ls~n~l~~~~~ 235 (719)
|++|||++|+++.+++
T Consensus 2 L~~Ldls~n~l~~ip~ 17 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPS 17 (22)
T ss_dssp ESEEEETSSEESEEGT
T ss_pred ccEEECCCCcCEeCCh
Confidence 3444444444443333
No 77
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=94.40 E-value=0.025 Score=30.17 Aligned_cols=16 Identities=50% Similarity=0.787 Sum_probs=7.4
Q ss_pred CCcEEECCCCcCCCcC
Q psy16110 670 QLQIINLSFNRLEKLP 685 (719)
Q Consensus 670 ~L~~L~Ls~N~l~~i~ 685 (719)
+|+.|+|++|+|+.+|
T Consensus 2 ~L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 2 NLRTLDLSNNRLTSLP 17 (17)
T ss_dssp T-SEEEETSS--SSE-
T ss_pred ccCEEECCCCCCCCCc
Confidence 5666666666665554
No 78
>cd01775 CYR1_RA Ubiquitin domain of CYR1 adenylate cyclase. CYR1 is a fungal adenylate cyclase with at least four domains, an N-terminal RA (Ras association) domain, a middle leucine-rich repeat domain, a catalytic domain. The N-terminal RA domain of CYR1 post-translationally modifies a small GTPase called Ras. The Ras-CYR1 pathway has been implicated in the transduction of a glucose-triggered signal to an intracellular environment where a protein phosphorylation cascade is initiated by cyclic AMP.
Probab=93.91 E-value=0.016 Score=46.75 Aligned_cols=62 Identities=26% Similarity=0.342 Sum_probs=48.2
Q ss_pred ccCCccccCCCCCCCCCCCCcee-----------EEee---------------eecccccchhhhhc---ccCCccCCCC
Q psy16110 49 MDCDNVAFPNGEYPTLPYGLNLV-----------TFSQ---------------RWVGHQILPMQIFS---SSVSSEPCDT 99 (719)
Q Consensus 49 ~~c~~~~~~~~~~~~l~~~~~~~-----------~~~~---------------~~~~~~~~~~~~~~---~~~~~~~c~~ 99 (719)
-+|+||+++||+|+|++.+.+++ +|.+ |..++...|+.++. .+.++.+-|+
T Consensus 2 ~y~IRIFr~D~Tf~Tls~~l~tTv~eli~~L~rK~~l~~~~ny~l~l~~~~l~RvL~p~ErPl~IqkrlL~q~GY~~~D~ 81 (97)
T cd01775 2 SYCIRVFRSDGTFTTLSCPLNTTVSELIPQLAKKFYLPSGGNYQLSLKKHDLSRVLRPTEKPLLIQKRLLLQVGYEERDR 81 (97)
T ss_pred ceEEEEEecCCcEEEEEcCCcCcHHHHHHHHHHhhcCCCCCCeEEEEEECCeeeecCCcCCcHHHHHHHHHHcCCCCCCc
Confidence 48999999999999999999987 2222 78888899988887 5567776665
Q ss_pred cC----CCCCccccc
Q psy16110 100 MI----DDFPYPCRC 110 (719)
Q Consensus 100 ~~----~~~~~~C~c 110 (719)
.. ++.+|.|++
T Consensus 82 l~~lGreD~Syl~rF 96 (97)
T cd01775 82 IEDIGREDNSFLCRF 96 (97)
T ss_pred HHHhCcccceEEEEe
Confidence 44 567777764
No 79
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=92.85 E-value=0.057 Score=28.81 Aligned_cols=11 Identities=36% Similarity=0.619 Sum_probs=3.1
Q ss_pred CcEEECCCCcC
Q psy16110 244 LLELRMDHNRF 254 (719)
Q Consensus 244 L~~L~L~~n~l 254 (719)
|++|++++|++
T Consensus 3 L~~L~l~~n~L 13 (17)
T PF13504_consen 3 LRTLDLSNNRL 13 (17)
T ss_dssp -SEEEETSS--
T ss_pred cCEEECCCCCC
Confidence 33333333333
No 80
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=92.58 E-value=0.092 Score=31.56 Aligned_cols=21 Identities=48% Similarity=0.718 Sum_probs=11.5
Q ss_pred CCCCEEECcCCCCcccCcCcc
Q psy16110 218 VNLRILDLSDNQIKAIEEGIL 238 (719)
Q Consensus 218 ~~L~~L~Ls~n~l~~~~~~~~ 238 (719)
++|++|+|++|+|+.+++++|
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHc
Confidence 345555555555555555444
No 81
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=92.58 E-value=0.092 Score=31.56 Aligned_cols=21 Identities=48% Similarity=0.718 Sum_probs=11.5
Q ss_pred CCCCEEECcCCCCcccCcCcc
Q psy16110 218 VNLRILDLSDNQIKAIEEGIL 238 (719)
Q Consensus 218 ~~L~~L~Ls~n~l~~~~~~~~ 238 (719)
++|++|+|++|+|+.+++++|
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHc
Confidence 345555555555555555444
No 82
>KOG3864|consensus
Probab=90.73 E-value=0.025 Score=52.66 Aligned_cols=82 Identities=23% Similarity=0.217 Sum_probs=49.6
Q ss_pred CCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCC-CCCcChhhh-cCCCCCCEEECCCC-CCcccCcccCCCCCCCCE
Q psy16110 573 SSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNK-FNYFPKELI-LGLSYLQEIDLSNN-QLKTIDDYDYGYLPRLRK 649 (719)
Q Consensus 573 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~l-~~l~~L~~L~Ls~n-~l~~~~~~~l~~l~~L~~ 649 (719)
..++.+|-++..|....-+.+..++.++.|.+.+|+ +...--+.+ +..++|+.|+|++| +|++-.-..+..+++|+.
T Consensus 101 ~~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~ 180 (221)
T KOG3864|consen 101 VKIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRR 180 (221)
T ss_pred ceEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHH
Confidence 357778888887777666666777777777777763 222111111 12367777777776 455444445566667776
Q ss_pred EeCCC
Q psy16110 650 LNLNN 654 (719)
Q Consensus 650 L~Ls~ 654 (719)
|.+.+
T Consensus 181 L~l~~ 185 (221)
T KOG3864|consen 181 LHLYD 185 (221)
T ss_pred HHhcC
Confidence 66654
No 83
>KOG3864|consensus
Probab=88.33 E-value=0.078 Score=49.48 Aligned_cols=82 Identities=16% Similarity=0.137 Sum_probs=48.3
Q ss_pred CccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCC-CCCCccEEEcCCC-CCCCCCchhhcCCCCccEE
Q psy16110 424 LLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFD-PLKKLEVLDLAAT-GLKSIPQYQFDELLNLKYL 501 (719)
Q Consensus 424 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~-~l~~L~~L~ls~n-~l~~~~~~~~~~~~~L~~L 501 (719)
.++.+|-++..|..+.-..+.+++.++.|.+.+|..+.+-.-+.+. ..++|+.|++++| +|++-....+..+++|+.|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 4677788887777665556777778888888877655443221111 2356666666655 4554444445555555555
Q ss_pred EccC
Q psy16110 502 CLAH 505 (719)
Q Consensus 502 ~L~~ 505 (719)
.+.+
T Consensus 182 ~l~~ 185 (221)
T KOG3864|consen 182 HLYD 185 (221)
T ss_pred HhcC
Confidence 5544
No 84
>KOG0473|consensus
Probab=86.40 E-value=0.024 Score=53.70 Aligned_cols=93 Identities=13% Similarity=0.089 Sum_probs=63.6
Q ss_pred CcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCcEEEcCCCCCCCcCCCcc
Q psy16110 255 TSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTF 334 (719)
Q Consensus 255 ~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 334 (719)
+++|-..+......+.||++.|++..+. ..|+-++.|..|+++.|++... |..++.+..++.+++..|.....+.
T Consensus 31 s~~~v~ei~~~kr~tvld~~s~r~vn~~-~n~s~~t~~~rl~~sknq~~~~-~~d~~q~~e~~~~~~~~n~~~~~p~--- 105 (326)
T KOG0473|consen 31 SEIPVREIASFKRVTVLDLSSNRLVNLG-KNFSILTRLVRLDLSKNQIKFL-PKDAKQQRETVNAASHKNNHSQQPK--- 105 (326)
T ss_pred cccchhhhhccceeeeehhhhhHHHhhc-cchHHHHHHHHHhccHhhHhhC-hhhHHHHHHHHHHHhhccchhhCCc---
Confidence 3455445556666777777777776664 3366677777788887777655 3456777777777777777777666
Q ss_pred ccccccCCCCCCEEeCCCCCC
Q psy16110 335 QGGAFNGLAKIHILNLGYNRL 355 (719)
Q Consensus 335 ~~~~l~~l~~L~~L~L~~n~l 355 (719)
+++..++++.+++.++.+
T Consensus 106 ---s~~k~~~~k~~e~k~~~~ 123 (326)
T KOG0473|consen 106 ---SQKKEPHPKKNEQKKTEF 123 (326)
T ss_pred ---cccccCCcchhhhccCcc
Confidence 566777777777777764
No 85
>KOG0473|consensus
Probab=86.27 E-value=0.01 Score=56.16 Aligned_cols=94 Identities=18% Similarity=0.241 Sum_probs=66.5
Q ss_pred CCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCcCCCcChHhh
Q psy16110 610 NYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERLF 689 (719)
Q Consensus 610 ~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~ 689 (719)
+.+|...+......+.||++.|++..... .|+.++.|..|+++.|++.-.+.+ +.....+..+++..|..+..|.+ |
T Consensus 31 s~~~v~ei~~~kr~tvld~~s~r~vn~~~-n~s~~t~~~rl~~sknq~~~~~~d-~~q~~e~~~~~~~~n~~~~~p~s-~ 107 (326)
T KOG0473|consen 31 SEIPVREIASFKRVTVLDLSSNRLVNLGK-NFSILTRLVRLDLSKNQIKFLPKD-AKQQRETVNAASHKNNHSQQPKS-Q 107 (326)
T ss_pred cccchhhhhccceeeeehhhhhHHHhhcc-chHHHHHHHHHhccHhhHhhChhh-HHHHHHHHHHHhhccchhhCCcc-c
Confidence 34554445666777788888887776655 466677788888888887766543 66667777788888877777764 5
Q ss_pred cCcccc-EEecCCCceee
Q psy16110 690 NTFLYT-NYDMAPNLVFQ 706 (719)
Q Consensus 690 ~~l~~L-~L~l~~N~l~~ 706 (719)
...+++ ++++.+|++.-
T Consensus 108 ~k~~~~k~~e~k~~~~~~ 125 (326)
T KOG0473|consen 108 KKEPHPKKNEQKKTEFFR 125 (326)
T ss_pred cccCCcchhhhccCcchH
Confidence 677788 88888888643
No 86
>PF01462 LRRNT: Leucine rich repeat N-terminal domain; InterPro: IPR000372 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. LRRs are often flanked by cysteine-rich domains: an N-terminal LRR domain and a C-terminal LRR domain (IPR000483 from INTERPRO). This entry represents the N-terminal LRR domain. ; PDB: 3E6J_A 1W8A_A 2V9S_C 2V9T_B 3TWI_D 3ZYN_A 3ZYO_A 1OOK_G 1QYY_G 1SQ0_B ....
Probab=81.28 E-value=0.87 Score=27.94 Aligned_cols=20 Identities=35% Similarity=0.972 Sum_probs=15.7
Q ss_pred CCcccccccCCCCcccccccccccC
Q psy16110 104 FPYPCRCKKMSESQLAMDCDNVAFP 128 (719)
Q Consensus 104 ~~~~C~c~~~~~~~~~~~c~~~~l~ 128 (719)
|+..|+|. ...|+|++.+++
T Consensus 2 CP~~C~C~-----~~~V~C~~~~L~ 21 (28)
T PF01462_consen 2 CPRPCTCS-----GLTVDCSGRGLT 21 (28)
T ss_dssp SETTSEEE-----TTEEEETTSS-S
T ss_pred cCCCCEec-----CCEeECCCCCCC
Confidence 56689998 578999998877
No 87
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=80.90 E-value=1 Score=26.92 Aligned_cols=18 Identities=44% Similarity=0.656 Sum_probs=14.7
Q ss_pred CCCcEEECCCCcCCCcCh
Q psy16110 669 SQLQIINLSFNRLEKLPE 686 (719)
Q Consensus 669 ~~L~~L~Ls~N~l~~i~~ 686 (719)
++|+.|++++|+|+++|+
T Consensus 2 ~~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLTSLPE 19 (26)
T ss_pred cccceeecCCCccccCcc
Confidence 478888888888888886
No 88
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=76.89 E-value=2.1 Score=25.74 Aligned_cols=17 Identities=29% Similarity=0.585 Sum_probs=12.3
Q ss_pred CCCcEEECCCCcCCCcC
Q psy16110 669 SQLQIINLSFNRLEKLP 685 (719)
Q Consensus 669 ~~L~~L~Ls~N~l~~i~ 685 (719)
++|+.|++++|+|+.+.
T Consensus 2 ~~L~~L~L~~NkI~~IE 18 (26)
T smart00365 2 TNLEELDLSQNKIKKIE 18 (26)
T ss_pred CccCEEECCCCccceec
Confidence 57788888888776553
No 89
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=73.41 E-value=2 Score=25.08 Aligned_cols=15 Identities=47% Similarity=0.700 Sum_probs=7.2
Q ss_pred CCCCEEECCCCCCcc
Q psy16110 621 SYLQEIDLSNNQLKT 635 (719)
Q Consensus 621 ~~L~~L~Ls~n~l~~ 635 (719)
++|++|+|++|+|++
T Consensus 2 ~~L~~L~l~~n~i~~ 16 (24)
T PF13516_consen 2 PNLETLDLSNNQITD 16 (24)
T ss_dssp TT-SEEE-TSSBEHH
T ss_pred CCCCEEEccCCcCCH
Confidence 455566666665543
No 90
>smart00013 LRRNT Leucine rich repeat N-terminal domain.
Probab=70.22 E-value=3.7 Score=26.27 Aligned_cols=20 Identities=35% Similarity=0.916 Sum_probs=16.0
Q ss_pred CCcccccccCCCCcccccccccccC
Q psy16110 104 FPYPCRCKKMSESQLAMDCDNVAFP 128 (719)
Q Consensus 104 ~~~~C~c~~~~~~~~~~~c~~~~l~ 128 (719)
|+..|.|. ...|+|.+.+++
T Consensus 2 CP~~C~C~-----~~~V~C~~~~L~ 21 (33)
T smart00013 2 CPAPCNCS-----GTAVDCSGRGLT 21 (33)
T ss_pred cCCCCEEC-----CCEeEeCCCCcC
Confidence 56689997 468999998777
No 91
>KOG4242|consensus
Probab=67.72 E-value=22 Score=38.11 Aligned_cols=32 Identities=19% Similarity=0.444 Sum_probs=22.2
Q ss_pred ccCcCcCCCCCcceeeeccCC---cceeccCCccccC
Q psy16110 24 EPCDTMIDDFPYPCRCKKMSE---SQLAMDCDNVAFP 57 (719)
Q Consensus 24 ~~~~~~~~~~~~~~~c~~~~~---~~~~~~c~~~~~~ 57 (719)
.||+.+.+ .|-|.|..+.. ...+++.+.....
T Consensus 44 ~pc~~f~~--~yllecdf~d~lyr~ee~wdv~~iyls 78 (553)
T KOG4242|consen 44 LPCPDFGE--PYLLECDFLDGLYRPEEKWDVVEIYLS 78 (553)
T ss_pred CCCCcccc--ceeecccccccccchhHHhHHHHHHhc
Confidence 48999988 89999987663 2355655555544
No 92
>KOG3763|consensus
Probab=66.26 E-value=3.3 Score=44.95 Aligned_cols=64 Identities=28% Similarity=0.326 Sum_probs=36.3
Q ss_pred CCCCCCEEECCCCCCcccCcc--cCCCCCCCCEEeCCCC--cCCCCCcccCCCCCCCcEEECCCCcCC
Q psy16110 619 GLSYLQEIDLSNNQLKTIDDY--DYGYLPRLRKLNLNNN--NIDAISETCFFNSSQLQIINLSFNRLE 682 (719)
Q Consensus 619 ~l~~L~~L~Ls~n~l~~~~~~--~l~~l~~L~~L~Ls~N--~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 682 (719)
+.+.+..++|++|++..+... .-+..|+|+.|+|++| .+.....-.=-....|++|-+.+|++-
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLC 283 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccc
Confidence 456677778888876644321 1233477888888887 333222111112346777777777764
No 93
>KOG4242|consensus
Probab=64.74 E-value=38 Score=36.40 Aligned_cols=59 Identities=20% Similarity=0.104 Sum_probs=28.7
Q ss_pred ccEEEcCCCCCCCcChh---hhcCCCCCCEEECCCCCCcccC----cccCCCCCCCCEEeCCCCcC
Q psy16110 599 LKTLKLAFNKFNYFPKE---LILGLSYLQEIDLSNNQLKTID----DYDYGYLPRLRKLNLNNNNI 657 (719)
Q Consensus 599 L~~L~L~~n~l~~~~~~---~l~~l~~L~~L~Ls~n~l~~~~----~~~l~~l~~L~~L~Ls~N~l 657 (719)
+..+.++.|.+..-... .+..-+.+..|++++|...... +..+..-.+++.+..+.|..
T Consensus 415 l~el~ls~~~lka~l~s~in~l~stqtl~kldisgn~mgd~gap~lpkalq~n~rlr~ipds~n~p 480 (553)
T KOG4242|consen 415 LAELSLSPGPLKAGLESAINKLLSTQTLAKLDISGNGMGDGGAPPLPKALQSNCRLRPIPDSLNLP 480 (553)
T ss_pred ccCcccCCCcccccHHHHHHhhccCcccccccccCCCcccCCCCcCccccCCCCccCCCCCCCCCc
Confidence 45556666655542222 1233456677777777655322 22333334455555554443
No 94
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=62.48 E-value=6.4 Score=24.03 Aligned_cols=15 Identities=33% Similarity=0.483 Sum_probs=11.9
Q ss_pred CCCcEEECCCCcCCC
Q psy16110 669 SQLQIINLSFNRLEK 683 (719)
Q Consensus 669 ~~L~~L~Ls~N~l~~ 683 (719)
++|++|||++|.++.
T Consensus 2 ~~L~~LdL~~N~i~~ 16 (28)
T smart00368 2 PSLRELDLSNNKLGD 16 (28)
T ss_pred CccCEEECCCCCCCH
Confidence 578888888888864
No 95
>KOG3763|consensus
Probab=53.01 E-value=6.9 Score=42.57 Aligned_cols=38 Identities=37% Similarity=0.452 Sum_probs=22.0
Q ss_pred cCCCCCCEEeCCCCccccccC--CccCCCCCCCEEEccCC
Q psy16110 517 KNLLNLTYLDLSNNNIVNLRV--GSLYGLPSMKRLDLSFN 554 (719)
Q Consensus 517 ~~l~~L~~L~Ls~n~i~~~~~--~~l~~l~~L~~L~L~~n 554 (719)
.+.+.+..+.+++|++..+.. ..-...|+|+.|+|++|
T Consensus 215 ~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N 254 (585)
T KOG3763|consen 215 ENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHN 254 (585)
T ss_pred cCCcceeeeecccchhhchhhhhHHHHhcchhheeecccc
Confidence 345667777777777655321 11224466777777776
No 96
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=42.72 E-value=16 Score=47.83 Aligned_cols=35 Identities=29% Similarity=0.423 Sum_probs=30.3
Q ss_pred ECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCC
Q psy16110 627 DLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAIS 661 (719)
Q Consensus 627 ~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 661 (719)
||++|+|+.+++..|..+++|+.|+|++|++.+-.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~CDC 35 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFECDC 35 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCcccccc
Confidence 68899999999888999999999999999887753
No 97
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=39.70 E-value=21 Score=21.14 Aligned_cols=12 Identities=42% Similarity=0.570 Sum_probs=5.9
Q ss_pred CcCcEEeCcCCC
Q psy16110 447 PTLLHLNLSRNA 458 (719)
Q Consensus 447 ~~L~~L~L~~n~ 458 (719)
++|++|++++|.
T Consensus 2 ~~L~~L~l~~C~ 13 (26)
T smart00367 2 PNLRELDLSGCT 13 (26)
T ss_pred CCCCEeCCCCCC
Confidence 345555555553
No 98
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=29.25 E-value=31 Score=45.42 Aligned_cols=32 Identities=31% Similarity=0.446 Sum_probs=30.2
Q ss_pred EcCCCCCCCcChhhhcCCCCCCEEECCCCCCc
Q psy16110 603 KLAFNKFNYFPKELILGLSYLQEIDLSNNQLK 634 (719)
Q Consensus 603 ~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~ 634 (719)
+|++|+|+.+++..|..+++|+.|+|++|.+.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 58999999999999999999999999999886
Done!