Query psy16110
Match_columns 719
No_of_seqs 617 out of 4426
Neff 9.7
Searched_HMMs 13730
Date Fri Aug 16 21:09:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16110.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16110hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 100.0 7.5E-28 5.4E-32 255.6 32.2 356 248-679 28-383 (384)
2 d2omza2 c.10.2.1 (A:33-416) In 100.0 1.1E-27 8E-32 254.3 31.8 356 224-655 28-383 (384)
3 d1xkua_ c.10.2.7 (A:) Decorin 100.0 1.3E-26 9.6E-31 237.6 31.6 279 402-695 12-300 (305)
4 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 7.4E-26 5.4E-30 229.3 25.1 226 476-717 15-242 (284)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.9 5.1E-25 3.7E-29 225.7 30.8 283 379-675 11-304 (305)
6 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 3E-26 2.2E-30 232.2 19.9 237 104-392 2-239 (284)
7 d1p9ag_ c.10.2.7 (G:) von Will 99.9 5.8E-25 4.2E-29 220.2 21.4 201 497-717 11-212 (266)
8 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 7.6E-25 5.5E-29 225.2 12.4 248 424-704 51-303 (313)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.9 3.3E-23 2.4E-27 207.3 21.5 206 107-356 3-208 (266)
10 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 2.7E-24 2E-28 221.0 12.9 224 473-705 51-281 (313)
11 d1jl5a_ c.10.2.6 (A:) Leucine 99.9 2.6E-19 1.9E-23 186.4 38.4 99 218-330 38-136 (353)
12 d1jl5a_ c.10.2.6 (A:) Leucine 99.9 3.2E-19 2.4E-23 185.7 38.8 57 621-685 284-340 (353)
13 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.8 4.3E-20 3.1E-24 181.7 15.2 215 106-363 4-221 (242)
14 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.8 5.6E-20 4.1E-24 180.9 15.2 218 451-676 12-232 (242)
15 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.8 2E-19 1.5E-23 169.8 11.5 138 103-279 1-139 (192)
16 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 6E-22 4.4E-26 214.5 -7.3 390 267-683 3-440 (460)
17 d1h6ua2 c.10.2.1 (A:36-262) In 99.8 1.1E-18 8.2E-23 169.5 16.5 186 494-700 39-225 (227)
18 d1h6ua2 c.10.2.1 (A:36-262) In 99.8 4.9E-18 3.6E-22 164.9 18.0 202 428-677 24-225 (227)
19 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 4.2E-22 3.1E-26 215.7 -12.4 62 190-255 3-68 (460)
20 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 7.7E-18 5.6E-22 158.7 15.6 176 523-718 11-188 (192)
21 d2omxa2 c.10.2.1 (A:37-235) In 99.7 8.6E-18 6.2E-22 159.4 15.2 167 167-358 21-187 (199)
22 d2omxa2 c.10.2.1 (A:37-235) In 99.7 4.1E-17 3E-21 154.7 16.9 149 495-660 39-187 (199)
23 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 4.2E-17 3.1E-21 155.9 16.2 164 188-386 45-208 (210)
24 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 5.2E-17 3.8E-21 155.3 16.4 163 165-352 47-209 (210)
25 d1a9na_ c.10.2.4 (A:) Spliceso 99.6 2.4E-15 1.7E-19 136.5 8.4 132 213-349 13-145 (162)
26 d1dcea3 c.10.2.2 (A:444-567) R 99.5 1.3E-14 9.3E-19 125.1 11.4 115 576-695 1-119 (124)
27 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 4.7E-15 3.5E-19 134.5 8.9 128 540-675 14-145 (162)
28 d1dcea3 c.10.2.2 (A:444-567) R 99.5 1.7E-14 1.2E-18 124.3 10.1 85 239-326 17-102 (124)
29 d2ifga3 c.10.2.7 (A:36-191) Hi 99.5 2.6E-14 1.9E-18 128.6 11.1 107 574-682 9-116 (156)
30 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 1.5E-14 1.1E-18 149.5 4.9 242 441-684 25-317 (344)
31 d2astb2 c.10.1.3 (B:2136-2419) 99.4 1.1E-14 7.8E-19 145.9 3.1 39 617-655 196-235 (284)
32 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 1.6E-14 1.2E-18 149.2 4.2 191 471-661 92-318 (344)
33 d2astb2 c.10.1.3 (B:2136-2419) 99.4 7.1E-14 5.1E-18 139.8 7.8 59 573-631 175-235 (284)
34 d2ifga3 c.10.2.7 (A:36-191) Hi 99.4 2.1E-12 1.5E-16 115.9 12.6 111 597-717 8-120 (156)
35 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 1.7E-14 1.2E-18 135.6 -8.1 131 214-349 44-180 (198)
36 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 3.1E-14 2.3E-18 133.8 -8.8 128 166-305 25-155 (198)
37 d1koha1 c.10.2.3 (A:201-362) m 98.4 1E-09 7.4E-14 98.8 -8.7 39 289-327 90-128 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 98.3 1E-08 7.5E-13 92.0 -3.8 64 619-682 63-128 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.9 3E-06 2.2E-10 75.8 3.5 107 573-679 15-141 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.8 1.1E-05 8.1E-10 71.9 5.8 111 594-704 12-143 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 97.1 5.2E-05 3.8E-09 67.3 1.3 109 573-681 17-144 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.9 8.9E-05 6.5E-09 65.8 0.6 93 288-388 44-142 (166)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.96 E-value=7.5e-28 Score=255.55 Aligned_cols=356 Identities=24% Similarity=0.329 Sum_probs=193.1
Q ss_pred ECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCcEEEcCCCCCC
Q psy16110 248 RMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLN 327 (719)
Q Consensus 248 ~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 327 (719)
.++.+.++.... ...+.+|++|+++++.|+.+ +.+..+++|++|++++|+++++++ ++++++|++|++++|++.
T Consensus 28 ~l~~~~~~~~~~--~~~l~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~l~~--l~~L~~L~~L~L~~n~i~ 101 (384)
T d2omza2 28 VLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA 101 (384)
T ss_dssp HTTCSSTTSEEC--HHHHTTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred HhCCCCCCCccC--HHHhCCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCCCCcc--ccCCcccccccccccccc
Confidence 444555544321 23456777777777777765 346667777777777777777653 677777777777777776
Q ss_pred CcCCCccccccccCCCCCCEEeCCCCCCCccccccccCcccccccccccCCCccEEECCCCCCcCcCCcchhccCCEEEc
Q psy16110 328 KLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDTLDNLNV 407 (719)
Q Consensus 328 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~~L~~L~l 407 (719)
++.+ +..+++|+.|+++++.++.+.... ....+.......+.+.........
T Consensus 102 ~i~~-------l~~l~~L~~L~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~l~~~~~~~~~-------- 153 (384)
T d2omza2 102 DITP-------LANLTNLTGLTLFNNQITDIDPLK-------------NLTNLNRLELSSNTISDISALSGL-------- 153 (384)
T ss_dssp CCGG-------GTTCTTCCEEECCSSCCCCCGGGT-------------TCTTCSEEEEEEEEECCCGGGTTC--------
T ss_pred cccc-------cccccccccccccccccccccccc-------------cccccccccccccccccccccccc--------
Confidence 5542 455666666666666554432211 122333333333322222111000
Q ss_pred cCCcccccccCccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCCCCCCCC
Q psy16110 408 RDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSI 487 (719)
Q Consensus 408 ~~n~l~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~ 487 (719)
............... ..+...+.........+ ..... ..+..+++++.+++++|.++.+
T Consensus 154 -------------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~--~~~~~l~~~~~l~l~~n~i~~~ 212 (384)
T d2omza2 154 -------------TSLQQLSFGNQVTDL-----KPLANLTTLERLDISSN-KVSDI--SVLAKLTNLESLIATNNQISDI 212 (384)
T ss_dssp -------------TTCSEEEEEESCCCC-----GGGTTCTTCCEEECCSS-CCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred -------------ccccccccccccchh-----hhhcccccccccccccc-ccccc--cccccccccceeeccCCccCCC
Confidence 011111111111111 11223333333344333 11111 1234556666666666666665
Q ss_pred CchhhcCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCcCCcccCCcCCCC
Q psy16110 488 PQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTK 567 (719)
Q Consensus 488 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~ 567 (719)
.+ +..+++|++|++++|.++.++ .+..+++|+.|++++|++++..+ +..+++|++|++++|+++.+++ +
T Consensus 213 ~~--~~~~~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~~--~--- 281 (384)
T d2omza2 213 TP--LGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--L--- 281 (384)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCCG--GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--G---
T ss_pred Cc--ccccCCCCEEECCCCCCCCcc--hhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCCCc--c---
Confidence 43 344566777777777666654 24566677777777776666532 5566666666666666654432 1
Q ss_pred CCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCC
Q psy16110 568 SKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRL 647 (719)
Q Consensus 568 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L 647 (719)
..++.++.+++++|.+++. ..+..+++++.|++++|+++++++ +..+++|++|++++|++++++ .+.++++|
T Consensus 282 --~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~~l~--~l~~l~~L 353 (384)
T d2omza2 282 --AGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDVS--SLANLTNI 353 (384)
T ss_dssp --TTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCCG--GGGGCTTC
T ss_pred --ccccccccccccccccccc--cccchhcccCeEECCCCCCCCCcc--cccCCCCCEEECCCCCCCCCh--hHcCCCCC
Confidence 1235566666666666553 235556666666666666666543 455666666666666666544 25566666
Q ss_pred CEEeCCCCcCCCCCcccCCCCCCCcEEECCCC
Q psy16110 648 RKLNLNNNNIDAISETCFFNSSQLQIINLSFN 679 (719)
Q Consensus 648 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 679 (719)
++|++++|+++++++ +.++++|+.|+|++|
T Consensus 354 ~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 354 NWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 666666666666554 556666666666655
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.96 E-value=1.1e-27 Score=254.25 Aligned_cols=356 Identities=22% Similarity=0.312 Sum_probs=238.0
Q ss_pred ECcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCc
Q psy16110 224 DLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLT 303 (719)
Q Consensus 224 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~ 303 (719)
.++.+.+++... .+.+.+|++|++++++|+++. .+..+++|++|++++|+|+++++ ++++++|++|++++|++.
T Consensus 28 ~l~~~~~~~~~~--~~~l~~l~~L~l~~~~I~~l~--gl~~L~nL~~L~Ls~N~l~~l~~--l~~L~~L~~L~L~~n~i~ 101 (384)
T d2omza2 28 VLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSID--GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA 101 (384)
T ss_dssp HTTCSSTTSEEC--HHHHTTCCEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred HhCCCCCCCccC--HHHhCCCCEEECCCCCCCCcc--ccccCCCCCEEeCcCCcCCCCcc--ccCCcccccccccccccc
Confidence 455555554322 245778999999999999985 47889999999999999999864 899999999999999999
Q ss_pred ccCcccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCCEEeCCCCCCCccccccccCcccccccccccCCCccEE
Q psy16110 304 TIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSL 383 (719)
Q Consensus 304 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L 383 (719)
++.+ ++++++|+.|+++++.++++.. ......+.......+.+..+....... .......
T Consensus 102 ~i~~--l~~l~~L~~L~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~-----------~~~~~~~ 161 (384)
T d2omza2 102 DITP--LANLTNLTGLTLFNNQITDIDP-------LKNLTNLNRLELSSNTISDISALSGLT-----------SLQQLSF 161 (384)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCCCGG-------GTTCTTCSEEEEEEEEECCCGGGTTCT-----------TCSEEEE
T ss_pred cccc--cccccccccccccccccccccc-------ccccccccccccccccccccccccccc-----------ccccccc
Confidence 8764 8899999999999999988765 234456677777666654433221111 1111111
Q ss_pred ECCCCCCcCcCCcchhccCCEEEccCCcccccccCccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCC
Q psy16110 384 DLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSL 463 (719)
Q Consensus 384 ~L~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l 463 (719)
......... ........ ......+.... ...+..+++++.+++++| .+..+
T Consensus 162 ~~~~~~~~~---~~~~~~~~-----------------------~~~~~~~~~~~--~~~~~~l~~~~~l~l~~n-~i~~~ 212 (384)
T d2omza2 162 GNQVTDLKP---LANLTTLE-----------------------RLDISSNKVSD--ISVLAKLTNLESLIATNN-QISDI 212 (384)
T ss_dssp EESCCCCGG---GTTCTTCC-----------------------EEECCSSCCCC--CGGGGGCTTCSEEECCSS-CCCCC
T ss_pred ccccchhhh---hccccccc-----------------------ccccccccccc--ccccccccccceeeccCC-ccCCC
Confidence 111111111 11111122 22222222221 122344555555555555 34443
Q ss_pred CCCCCCCCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCC
Q psy16110 464 PVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGL 543 (719)
Q Consensus 464 ~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l 543 (719)
++ +..+++|++|++++|.++.++ .+..+++|+.|++++|.++++++ +..+++|++|+++++++.+.. .+..+
T Consensus 213 ~~--~~~~~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~--~~~~~ 284 (384)
T d2omza2 213 TP--LGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS--PLAGL 284 (384)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCCG--GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG--GGTTC
T ss_pred Cc--ccccCCCCEEECCCCCCCCcc--hhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCCC--ccccc
Confidence 32 234456666666666666554 35566777777777777776654 566777777777777776653 36677
Q ss_pred CCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCC
Q psy16110 544 PSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYL 623 (719)
Q Consensus 544 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 623 (719)
+.++.+.+++|.++++.. + ..++++++|++++|+++++. .+..+++|++|++++|+++.++ .+.++++|
T Consensus 285 ~~l~~l~~~~n~l~~~~~--~-----~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~l~--~l~~l~~L 353 (384)
T d2omza2 285 TALTNLELNENQLEDISP--I-----SNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSDVS--SLANLTNI 353 (384)
T ss_dssp TTCSEEECCSSCCSCCGG--G-----GGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCCCG--GGGGCTTC
T ss_pred cccccccccccccccccc--c-----chhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCCCh--hHcCCCCC
Confidence 778888888887765432 2 12477888888888888763 3778888888888888888776 37788889
Q ss_pred CEEECCCCCCcccCcccCCCCCCCCEEeCCCC
Q psy16110 624 QEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNN 655 (719)
Q Consensus 624 ~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N 655 (719)
++|++++|+++++++ +.++++|++|+|++|
T Consensus 354 ~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 354 NWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 999999998888775 788889999998887
No 3
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.95 E-value=1.3e-26 Score=237.64 Aligned_cols=279 Identities=24% Similarity=0.359 Sum_probs=219.1
Q ss_pred CCEEEccCCcccccccCccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCC
Q psy16110 402 LDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAA 481 (719)
Q Consensus 402 L~~L~l~~n~l~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~ 481 (719)
.+.++-++.+++.+|..+ .+++++|++++|+++.+++..|.++++|++|++++| .+..+++..|..+++|+.|++++
T Consensus 12 ~~~~~C~~~~L~~lP~~l--~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n-~~~~i~~~~f~~l~~L~~L~l~~ 88 (305)
T d1xkua_ 12 LRVVQCSDLGLEKVPKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINN-KISKISPGAFAPLVKLERLYLSK 88 (305)
T ss_dssp TTEEECTTSCCCSCCCSC--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS-CCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCCccCCCC--CCCCCEEECcCCcCCCcChhHhhccccccccccccc-cccccchhhhhCCCccCEecccC
Confidence 444555555555555433 256777777777777777767777777788888777 66667666677778888888888
Q ss_pred CCCCCCCchhhcCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCcccc--ccCCccCCCCCCCEEEccCCcCCcc
Q psy16110 482 TGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVN--LRVGSLYGLPSMKRLDLSFNKLTTF 559 (719)
Q Consensus 482 n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~--~~~~~l~~l~~L~~L~L~~n~l~~~ 559 (719)
|+++.++... ...++.|++.+|.+..++...+.....+..++...|.... ..+..+..+++|+.+++++|.++.+
T Consensus 89 n~l~~l~~~~---~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l 165 (305)
T d1xkua_ 89 NQLKELPEKM---PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI 165 (305)
T ss_dssp SCCSBCCSSC---CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC
T ss_pred CccCcCccch---hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcccc
Confidence 8877776532 3567788888888888888778888888888888775433 4455677888999999999988876
Q ss_pred cCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcc
Q psy16110 560 KGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDY 639 (719)
Q Consensus 560 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~ 639 (719)
+... +++|++|++++|..+...+..|..++.+++|++++|.++++++.++.++++|++|+|++|+++.++.
T Consensus 166 ~~~~--------~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~- 236 (305)
T d1xkua_ 166 PQGL--------PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPG- 236 (305)
T ss_dssp CSSC--------CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCT-
T ss_pred Cccc--------CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccccccc-
Confidence 5443 3789999999999998888889999999999999999999988889999999999999999998865
Q ss_pred cCCCCCCCCEEeCCCCcCCCCCcccC------CCCCCCcEEECCCCcCC--CcChHhhcCcccc
Q psy16110 640 DYGYLPRLRKLNLNNNNIDAISETCF------FNSSQLQIINLSFNRLE--KLPERLFNTFLYT 695 (719)
Q Consensus 640 ~l~~l~~L~~L~Ls~N~l~~~~~~~~------~~l~~L~~L~Ls~N~l~--~i~~~~~~~l~~L 695 (719)
.+..+++|++|+|++|+|+.+....| ...++|+.|+|++|+++ .+++.+|+.+...
T Consensus 237 ~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~~~~~~~f~~~~~~ 300 (305)
T d1xkua_ 237 GLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVR 300 (305)
T ss_dssp TTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCG
T ss_pred ccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCccCcCCHhHhcccccC
Confidence 78899999999999999998876555 34678999999999887 6888888776554
No 4
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=7.4e-26 Score=229.32 Aligned_cols=226 Identities=23% Similarity=0.339 Sum_probs=184.0
Q ss_pred EEEcCCCCCCCCCchhhcCCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEcc-CC
Q psy16110 476 VLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLS-FN 554 (719)
Q Consensus 476 ~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~-~n 554 (719)
.++.++++++.+|... .+++++|+|++|+++.++..+|.++++|++|++++|++..+.+..+..+..++.+... .+
T Consensus 15 ~v~c~~~~L~~iP~~i---p~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~ 91 (284)
T d1ozna_ 15 TTSCPQQGLQAVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (284)
T ss_dssp EEECCSSCCSSCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred EEEcCCCCCCccCCCC---CCCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccc
Confidence 4566666677666532 2457788888888887777777788888888888888888777777777888887664 45
Q ss_pred cCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCc
Q psy16110 555 KLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLK 634 (719)
Q Consensus 555 ~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~ 634 (719)
.++.++...|. ++++|++|++++|.+....+..+...++|+.+++++|+++.+++.+|..+++|++|++++|++.
T Consensus 92 ~~~~l~~~~~~-----~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~ 166 (284)
T d1ozna_ 92 QLRSVDPATFH-----GLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS 166 (284)
T ss_dssp TCCCCCTTTTT-----TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ccccccchhhc-----ccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCccc
Confidence 56666555554 4588888888888888777777888888999999999998888888888889999999999999
Q ss_pred ccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCcCCCcChHhhcCcccc-EEecCCCceeeeccCCCc
Q psy16110 635 TIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERLFNTFLYT-NYDMAPNLVFQSHLSGHR 713 (719)
Q Consensus 635 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~L~l~~N~l~~~~~~~~~ 713 (719)
++++.+|.++++|+++++++|+++++.+..|..+++|++||+++|+++.+++.+|+++++| +|++++||+ .
T Consensus 167 ~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l--------~ 238 (284)
T d1ozna_ 167 SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPW--------V 238 (284)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCE--------E
T ss_pred ccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCC--------C
Confidence 8888888899999999999999999888889989999999999999999998899999999 999999998 8
Q ss_pred cccC
Q psy16110 714 CECA 717 (719)
Q Consensus 714 C~c~ 717 (719)
|+|+
T Consensus 239 C~C~ 242 (284)
T d1ozna_ 239 CDCR 242 (284)
T ss_dssp CSGG
T ss_pred CCcc
Confidence 8886
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.94 E-value=5.1e-25 Score=225.70 Aligned_cols=283 Identities=24% Similarity=0.336 Sum_probs=240.1
Q ss_pred CccEEECCCCCCcCcCCcchhccCCEEEccCCcccccccCcc-CCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCC
Q psy16110 379 KLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSAL-NYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRN 457 (719)
Q Consensus 379 ~L~~L~L~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~-~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 457 (719)
..+.++.++..++.+|. ..++.+++|++++|+++.+++..+ .+++|++|++++|.+..+.+..|.++++|++|++++|
T Consensus 11 ~~~~~~C~~~~L~~lP~-~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 11 HLRVVQCSDLGLEKVPK-DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp ETTEEECTTSCCCSCCC-SCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred cCCEEEecCCCCCccCC-CCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCC
Confidence 45778888888888876 445789999999999999987655 5899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCCcCC--CCChhhhcCCCCCCEEeCCCCccccc
Q psy16110 458 AHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLT--EIPEMMFKNLLNLTYLDLSNNNIVNL 535 (719)
Q Consensus 458 ~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~Ls~n~i~~~ 535 (719)
.++.+|... ...++.|++.+|.+..++...+.....+..++...+... ......|..+++|+++++++|.+..+
T Consensus 90 -~l~~l~~~~---~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l 165 (305)
T d1xkua_ 90 -QLKELPEKM---PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI 165 (305)
T ss_dssp -CCSBCCSSC---CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC
T ss_pred -ccCcCccch---hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcccc
Confidence 888888653 467899999999999999888888999999999888544 33445688899999999999998876
Q ss_pred cCCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChh
Q psy16110 536 RVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKE 615 (719)
Q Consensus 536 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 615 (719)
... .+++|++|++++|..+......+.. ++.+++|++++|.+++..+..+..+++|++|+|++|+++.+|.
T Consensus 166 ~~~---~~~~L~~L~l~~n~~~~~~~~~~~~-----~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~- 236 (305)
T d1xkua_ 166 PQG---LPPSLTELHLDGNKITKVDAASLKG-----LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPG- 236 (305)
T ss_dssp CSS---CCTTCSEEECTTSCCCEECTGGGTT-----CTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCT-
T ss_pred Ccc---cCCccCEEECCCCcCCCCChhHhhc-----cccccccccccccccccccccccccccceeeeccccccccccc-
Confidence 433 3679999999999988777666653 5899999999999999999999999999999999999999976
Q ss_pred hhcCCCCCCEEECCCCCCcccCcccC------CCCCCCCEEeCCCCcCC--CCCcccCCCCCCCcEEE
Q psy16110 616 LILGLSYLQEIDLSNNQLKTIDDYDY------GYLPRLRKLNLNNNNID--AISETCFFNSSQLQIIN 675 (719)
Q Consensus 616 ~l~~l~~L~~L~Ls~n~l~~~~~~~l------~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~ 675 (719)
++.++++|++|++++|+|+.++...| ...++|+.|+|++|++. .+.|.+|..+.....++
T Consensus 237 ~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~~~~~~~f~~~~~~~~~~ 304 (305)
T d1xkua_ 237 GLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQ 304 (305)
T ss_dssp TTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEE
T ss_pred ccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCccCcCCHhHhcccccCcccc
Confidence 58899999999999999999876555 35688999999999986 47788887666655554
No 6
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=3e-26 Score=232.22 Aligned_cols=237 Identities=26% Similarity=0.434 Sum_probs=201.9
Q ss_pred CCcccccccCCCCcccccccccccCCCCCCCCCCCCchhhhhcccccCCcCccccccCCCCcccEEEcCCCCccccCccc
Q psy16110 104 FPYPCRCKKMSESQLAMDCDNVAFPNGEYPTLPYGLNLVTFSQRWVGHQILPMQIFSSSDIPIRRLDFSGNALRRLSDKL 183 (719)
Q Consensus 104 ~~~~C~c~~~~~~~~~~~c~~~~l~~~~~~~~p~~~~~~~l~~~~~~~~~lp~~~~~~~~~~L~~L~Ls~n~i~~l~~~~ 183 (719)
||..|.|.. .....|+|++.+++ ++|. .++ .++++|+|++|+|+++|...
T Consensus 2 cp~~C~C~~--~~~~~v~c~~~~L~-----~iP~-------------------~ip----~~~~~L~Ls~N~i~~i~~~~ 51 (284)
T d1ozna_ 2 CPGACVCYN--EPKVTTSCPQQGLQ-----AVPV-------------------GIP----AASQRIFLHGNRISHVPAAS 51 (284)
T ss_dssp CCTTCEEEC--SSSCEEECCSSCCS-----SCCT-------------------TCC----TTCSEEECTTSCCCEECTTT
T ss_pred cCCCCEEcC--CCCeEEEcCCCCCC-----ccCC-------------------CCC----CCCCEEECcCCcCCCCCHHH
Confidence 567999963 34578899876554 4443 232 24899999999999999998
Q ss_pred ccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECc-CCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCC
Q psy16110 184 FSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLS-DNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSL 262 (719)
Q Consensus 184 f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls-~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l 262 (719)
|. .++.|++|++++|.+.. +....+.++..++.++.. .+.+..+++..|+++++|++|++++|.+..++...+
T Consensus 52 f~-~l~~L~~L~ls~n~l~~-----i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 125 (284)
T d1ozna_ 52 FR-ACRNLTILWLHSNVLAR-----IDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLF 125 (284)
T ss_dssp TT-TCTTCCEEECCSSCCCE-----ECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTT
T ss_pred hh-ccccccccccccccccc-----cccccccccccccccccccccccccccchhhcccccCCEEecCCccccccccccc
Confidence 86 56899999999999986 444678889999998865 667888988899999999999999999999888889
Q ss_pred CCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCcEEEcCCCCCCCcCCCccccccccCC
Q psy16110 263 NGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGL 342 (719)
Q Consensus 263 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l 342 (719)
..+++|+.+++++|.++.+++..|..+++|++|++++|.++.+++.+|.++++|+++++++|+++.+.+. .|..+
T Consensus 126 ~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~-----~f~~l 200 (284)
T d1ozna_ 126 RGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPH-----AFRDL 200 (284)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT-----TTTTC
T ss_pred chhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChh-----Hhhhh
Confidence 9999999999999999999989999999999999999999999999999999999999999999998776 46678
Q ss_pred CCCCEEeCCCCCCCccccccccCcccccccccccCCCccEEECCCCCCcC
Q psy16110 343 AKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLIN 392 (719)
Q Consensus 343 ~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~~n~l~~ 392 (719)
++|++|++++|++..++.. .|+.+++|++|++++|.+..
T Consensus 201 ~~L~~L~l~~N~i~~~~~~-----------~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 201 GRLMTLYLFANNLSALPTE-----------ALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp TTCCEEECCSSCCSCCCHH-----------HHTTCTTCCEEECCSSCEEC
T ss_pred hhccccccccccccccccc-----------ccccccccCEEEecCCCCCC
Confidence 9999999999999766543 45568899999999998764
No 7
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=5.8e-25 Score=220.16 Aligned_cols=201 Identities=26% Similarity=0.338 Sum_probs=130.7
Q ss_pred CccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCc
Q psy16110 497 NLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLE 576 (719)
Q Consensus 497 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~ 576 (719)
.+.+++.+++.++++|... .+++++|+|++|+|+++.+.+|.++++|++|+|++|+++.++... .+++|+
T Consensus 11 ~~~~v~C~~~~L~~iP~~l---p~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~~~-------~l~~L~ 80 (266)
T d1p9ag_ 11 SHLEVNCDKRNLTALPPDL---PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDG-------TLPVLG 80 (266)
T ss_dssp TCCEEECTTSCCSSCCSCC---CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCS-------CCTTCC
T ss_pred CCeEEEccCCCCCeeCcCc---CcCCCEEECcCCcCCCcCHHHhhcccccccccccccccccccccc-------cccccc
Confidence 3444455555555554321 134555666666655555555556666666666666655543221 236666
Q ss_pred EEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCc
Q psy16110 577 ELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNN 656 (719)
Q Consensus 577 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~ 656 (719)
+|++++|+++.. +..+..+++|+.|++++|.+..++...+..+.+++.|++++|.+..+++..+..++.|+.+++++|+
T Consensus 81 ~L~Ls~N~l~~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~ 159 (266)
T d1p9ag_ 81 TLDLSHNQLQSL-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (266)
T ss_dssp EEECCSSCCSSC-CCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred cccccccccccc-ccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccccc
Confidence 666666666654 4456667777777777777777666666777777777777777777777667777777777777777
Q ss_pred CCCCCcccCCCCCCCcEEECCCCcCCCcChHhhcCcccc-EEecCCCceeeeccCCCccccC
Q psy16110 657 IDAISETCFFNSSQLQIINLSFNRLEKLPERLFNTFLYT-NYDMAPNLVFQSHLSGHRCECA 717 (719)
Q Consensus 657 l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~L~l~~N~l~~~~~~~~~C~c~ 717 (719)
++++++..|..+++|++|||++|+|+.+|+++| .+++| .|+|++||+ .|+|+
T Consensus 160 l~~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~-~~~~L~~L~L~~Np~--------~CdC~ 212 (266)
T d1p9ag_ 160 LTELPAGLLNGLENLDTLLLQENSLYTIPKGFF-GSHLLPFAFLHGNPW--------LCNCE 212 (266)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT-TTCCCSEEECCSCCB--------CCSGG
T ss_pred ccccCccccccccccceeecccCCCcccChhHC-CCCCCCEEEecCCCC--------CCCcc
Confidence 777777777777777777777777777777654 46677 777777777 77775
No 8
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.91 E-value=7.6e-25 Score=225.21 Aligned_cols=248 Identities=23% Similarity=0.231 Sum_probs=134.2
Q ss_pred CccEEEccCCCCCCc--CcccccCCCcCcEEeCcC-CCCCCCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCCCccE
Q psy16110 424 LLTKLDLSHNNLKEL--EPTAFTNVPTLLHLNLSR-NAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKY 500 (719)
Q Consensus 424 ~L~~L~Ls~n~l~~~--~~~~~~~l~~L~~L~L~~-n~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~ 500 (719)
+++.|+++++.+.+. .|..++++++|++|+|++ |...+.+|.. |.++++|++|++++|++.++++..+..+.+|+.
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~-i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPA-IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGG-GGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccc-cccccccchhhhccccccccccccccchhhhcc
Confidence 466777777766652 345566677777777764 4233455543 455555555555555555555444555555555
Q ss_pred EEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEEC
Q psy16110 501 LCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNL 580 (719)
Q Consensus 501 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~L 580 (719)
+++++|.+....+..+..++.++++++++|.+.+..|..+..+.++ ++.+++
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l----------------------------~~~l~~ 181 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL----------------------------FTSMTI 181 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTT----------------------------CCEEEC
T ss_pred cccccccccccCchhhccCcccceeecccccccccccccccccccc----------------------------cccccc
Confidence 5555554443333344555555555555555554444444444333 244455
Q ss_pred cCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCC
Q psy16110 581 NNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAI 660 (719)
Q Consensus 581 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 660 (719)
++|++++..+..+..+..+ .++++++...+..+..+..+++++.+++++|.+.+.++ .+..+++|++|++++|++++.
T Consensus 182 ~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~ 259 (313)
T d1ogqa_ 182 SRNRLTGKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGT 259 (313)
T ss_dssp CSSEEEEECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEEC
T ss_pred ccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc-ccccccccccccCccCeeccc
Confidence 5555554444444444332 45555555555444445555566666666665555443 355556666666666666655
Q ss_pred CcccCCCCCCCcEEECCCCcCC-CcChHhhcCcccc-EEecCCCce
Q psy16110 661 SETCFFNSSQLQIINLSFNRLE-KLPERLFNTFLYT-NYDMAPNLV 704 (719)
Q Consensus 661 ~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L-~L~l~~N~l 704 (719)
.|..|.++++|++|||++|+|+ .+|. +.++++| .+++++|+.
T Consensus 260 iP~~l~~L~~L~~L~Ls~N~l~g~iP~--~~~L~~L~~l~l~~N~~ 303 (313)
T d1ogqa_ 260 LPQGLTQLKFLHSLNVSFNNLCGEIPQ--GGNLQRFDVSAYANNKC 303 (313)
T ss_dssp CCGGGGGCTTCCEEECCSSEEEEECCC--STTGGGSCGGGTCSSSE
T ss_pred CChHHhCCCCCCEEECcCCcccccCCC--cccCCCCCHHHhCCCcc
Confidence 5555666666666666666665 4543 3455666 666666664
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=3.3e-23 Score=207.26 Aligned_cols=206 Identities=28% Similarity=0.319 Sum_probs=165.5
Q ss_pred ccccccCCCCcccccccccccCCCCCCCCCCCCchhhhhcccccCCcCccccccCCCCcccEEEcCCCCccccCcccccc
Q psy16110 107 PCRCKKMSESQLAMDCDNVAFPNGEYPTLPYGLNLVTFSQRWVGHQILPMQIFSSSDIPIRRLDFSGNALRRLSDKLFSP 186 (719)
Q Consensus 107 ~C~c~~~~~~~~~~~c~~~~l~~~~~~~~p~~~~~~~l~~~~~~~~~lp~~~~~~~~~~L~~L~Ls~n~i~~l~~~~f~~ 186 (719)
.|.|... .+...|+|.+.+++ .+|. .++ .++++|+|++|+|+.++...|.
T Consensus 3 ~C~~~~~-~~~~~v~C~~~~L~-----~iP~-------------------~lp----~~l~~L~Ls~N~i~~l~~~~f~- 52 (266)
T d1p9ag_ 3 ICEVSKV-ASHLEVNCDKRNLT-----ALPP-------------------DLP----KDTTILHLSENLLYTFSLATLM- 52 (266)
T ss_dssp SSEEECS-TTCCEEECTTSCCS-----SCCS-------------------CCC----TTCCEEECTTSCCSEEEGGGGT-
T ss_pred ccEEccc-CCCeEEEccCCCCC-----eeCc-------------------CcC----cCCCEEECcCCcCCCcCHHHhh-
Confidence 5778743 33467899887666 3333 222 2599999999999999988885
Q ss_pred hhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCCCCCC
Q psy16110 187 HRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPR 266 (719)
Q Consensus 187 ~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~ 266 (719)
.+++|++|+|++|.++. + ..++.+++|++|+|++|+++..+. .+.++++|++|++++|.+.+++...+..+.
T Consensus 53 ~l~~L~~L~L~~N~l~~-l------~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~ 124 (266)
T d1p9ag_ 53 PYTRLTQLNLDRAELTK-L------QVDGTLPVLGTLDLSHNQLQSLPL-LGQTLPALTVLDVSFNRLTSLPLGALRGLG 124 (266)
T ss_dssp TCTTCCEEECTTSCCCE-E------ECCSCCTTCCEEECCSSCCSSCCC-CTTTCTTCCEEECCSSCCCCCCSSTTTTCT
T ss_pred ccccccccccccccccc-c------cccccccccccccccccccccccc-ccccccccccccccccccceeecccccccc
Confidence 57889999999998874 2 245678899999999998887755 578888999999999988888888888888
Q ss_pred CCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCC
Q psy16110 267 ALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIH 346 (719)
Q Consensus 267 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~ 346 (719)
++++|++++|.++.+++..+..+++|+.+++++|++++++++.|..+++|++|+|++|+|+.++.. +..+++|+
T Consensus 125 ~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~------~~~~~~L~ 198 (266)
T d1p9ag_ 125 ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKG------FFGSHLLP 198 (266)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTT------TTTTCCCS
T ss_pred ccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCcccChh------HCCCCCCC
Confidence 999999999998888888888888899999999998888888888888888999988888888764 33567788
Q ss_pred EEeCCCCCCC
Q psy16110 347 ILNLGYNRLN 356 (719)
Q Consensus 347 ~L~L~~n~l~ 356 (719)
.|+|++|.+.
T Consensus 199 ~L~L~~Np~~ 208 (266)
T d1p9ag_ 199 FAFLHGNPWL 208 (266)
T ss_dssp EEECCSCCBC
T ss_pred EEEecCCCCC
Confidence 8888888763
No 10
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.90 E-value=2.7e-24 Score=221.01 Aligned_cols=224 Identities=21% Similarity=0.288 Sum_probs=185.6
Q ss_pred CccEEEcCCCCCCCC--CchhhcCCCCccEEEccC-CcCC-CCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCE
Q psy16110 473 KLEVLDLAATGLKSI--PQYQFDELLNLKYLCLAH-NHLT-EIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKR 548 (719)
Q Consensus 473 ~L~~L~ls~n~l~~~--~~~~~~~~~~L~~L~L~~-n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~ 548 (719)
.++.|+++++.+.+. .+..++++++|++|+|++ |.++ .+|. .+.++++|++|++++|++.+..+..+..+.+|+.
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~-~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPP-AIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCG-GGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCcccccccccccccccccccc-ccccccccchhhhccccccccccccccchhhhcc
Confidence 567777777777652 234678888888888886 6776 4554 4788889999999999888888888888889999
Q ss_pred EEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCc-cEEEcCCCCCCCcChhhhcCCCCCCEEE
Q psy16110 549 LDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKL-KTLKLAFNKFNYFPKELILGLSYLQEID 627 (719)
Q Consensus 549 L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 627 (719)
+++++|.+....+..+. .++.++.+++++|.+.+.+|..+..+..+ +.+++++|++++..+..+..+.. ..++
T Consensus 130 l~l~~N~~~~~~p~~l~-----~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~-~~l~ 203 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSIS-----SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNL-AFVD 203 (313)
T ss_dssp EECCSSEEESCCCGGGG-----GCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCC-SEEE
T ss_pred cccccccccccCchhhc-----cCcccceeecccccccccccccccccccccccccccccccccccccccccccc-cccc
Confidence 99998887655444443 45889999999999998888888888776 89999999999877777777654 4799
Q ss_pred CCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCcCC-CcChHhhcCcccc-EEecCCCcee
Q psy16110 628 LSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLE-KLPERLFNTFLYT-NYDMAPNLVF 705 (719)
Q Consensus 628 Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L-~L~l~~N~l~ 705 (719)
++++...+..+..+..+++|+.+++++|.+.+.++. +..+++|+.|+|++|+++ .+|+ .|.++++| +|+|++|++.
T Consensus 204 l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~-~~~~~~L~~L~Ls~N~l~g~iP~-~l~~L~~L~~L~Ls~N~l~ 281 (313)
T d1ogqa_ 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQ-GLTQLKFLHSLNVSFNNLC 281 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCG-GGGGCTTCCEEECCSSEEE
T ss_pred cccccccccccccccccccccccccccccccccccc-cccccccccccCccCeecccCCh-HHhCCCCCCEEECcCCccc
Confidence 999999988888899999999999999999987764 788899999999999999 6776 57899999 9999999996
No 11
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.87 E-value=2.6e-19 Score=186.43 Aligned_cols=99 Identities=22% Similarity=0.342 Sum_probs=71.0
Q ss_pred CCCCEEECcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEc
Q psy16110 218 VNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIIL 297 (719)
Q Consensus 218 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 297 (719)
.++++|||+++.++.+|+ ..++|++|++++|+|+++|.. +.+|+.|++++|+++.+.. + .+.|++|++
T Consensus 38 ~~l~~LdLs~~~L~~lp~----~~~~L~~L~Ls~N~l~~lp~~----~~~L~~L~l~~n~l~~l~~--l--p~~L~~L~L 105 (353)
T d1jl5a_ 38 RQAHELELNNLGLSSLPE----LPPHLESLVASCNSLTELPEL----PQSLKSLLVDNNNLKALSD--L--PPLLEYLGV 105 (353)
T ss_dssp HTCSEEECTTSCCSCCCS----CCTTCSEEECCSSCCSSCCCC----CTTCCEEECCSSCCSCCCS--C--CTTCCEEEC
T ss_pred cCCCEEEeCCCCCCCCCC----CCCCCCEEECCCCCCcccccc----hhhhhhhhhhhcccchhhh--h--ccccccccc
Confidence 468888888888887764 256788888888888888752 4578888888888776642 1 245777888
Q ss_pred cCCCCcccCcccccCcccCcEEEcCCCCCCCcC
Q psy16110 298 RGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLN 330 (719)
Q Consensus 298 s~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 330 (719)
++|.+..++. ++.+++|++|+++++.+...+
T Consensus 106 ~~n~l~~lp~--~~~l~~L~~L~l~~~~~~~~~ 136 (353)
T d1jl5a_ 106 SNNQLEKLPE--LQNSSFLKIIDVDNNSLKKLP 136 (353)
T ss_dssp CSSCCSSCCC--CTTCTTCCEEECCSSCCSCCC
T ss_pred cccccccccc--hhhhccceeeccccccccccc
Confidence 8777776653 566777777777777665543
No 12
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.87 E-value=3.2e-19 Score=185.67 Aligned_cols=57 Identities=28% Similarity=0.538 Sum_probs=28.3
Q ss_pred CCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCcCCCcC
Q psy16110 621 SYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLP 685 (719)
Q Consensus 621 ~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~ 685 (719)
++|++|++++|+++.++. .+++|+.|++++|+|+.++.. +++|++|++++|+++.+|
T Consensus 284 ~~L~~L~Ls~N~l~~lp~----~~~~L~~L~L~~N~L~~l~~~----~~~L~~L~L~~N~L~~lp 340 (353)
T d1jl5a_ 284 PSLEELNVSNNKLIELPA----LPPRLERLIASFNHLAEVPEL----PQNLKQLHVEYNPLREFP 340 (353)
T ss_dssp TTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCCCC----CTTCCEEECCSSCCSSCC
T ss_pred CCCCEEECCCCccCcccc----ccCCCCEEECCCCcCCccccc----cCCCCEEECcCCcCCCCC
Confidence 445555555555554432 234555555555555544321 235555555555555554
No 13
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=4.3e-20 Score=181.74 Aligned_cols=215 Identities=20% Similarity=0.293 Sum_probs=167.3
Q ss_pred cccccccCCCCcccccccccccCCCCCCCCCCCCchhhhhcccccCCcCccccccCCCCcccEEEcCCCCccccCccccc
Q psy16110 106 YPCRCKKMSESQLAMDCDNVAFPNGEYPTLPYGLNLVTFSQRWVGHQILPMQIFSSSDIPIRRLDFSGNALRRLSDKLFS 185 (719)
Q Consensus 106 ~~C~c~~~~~~~~~~~c~~~~l~~~~~~~~p~~~~~~~l~~~~~~~~~lp~~~~~~~~~~L~~L~Ls~n~i~~l~~~~f~ 185 (719)
..|+|. ...++|.+.+++ .+|..++. ++++||+++|.|+.+|..+|.
T Consensus 4 ~~C~C~-----~~~i~c~~~~l~------------------------~iP~~l~~----~l~~L~Ls~n~i~~l~~~~f~ 50 (242)
T d1xwdc1 4 RICHCS-----NRVFLCQESKVT------------------------EIPSDLPR----NAIELRFVLTKLRVIQKGAFS 50 (242)
T ss_dssp SSEEEC-----SSEEEEESCSCS------------------------SCCSCSCS----CCSEEEEESCCCCEECTTTTT
T ss_pred CcCCCc-----CCEEEEeCCCCC------------------------CcCCCCCC----CCCEEECcCCcCCccChhHhh
Confidence 468886 357889875554 34433432 599999999999999999996
Q ss_pred chhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcC-CCCcccCcCccCCCccCcEEECCCCcCCcCCCCC-CC
Q psy16110 186 PHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSD-NQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVS-LN 263 (719)
Q Consensus 186 ~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~-l~ 263 (719)
.+++|++|++++|.+...++ +.+|.++++++++.+.. |.+..+++..|.++++|++|++++|.++..+... +.
T Consensus 51 -~l~~L~~L~ls~n~~~~~i~----~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~ 125 (242)
T d1xwdc1 51 -GFGDLEKIEISQNDVLEVIE----ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIH 125 (242)
T ss_dssp -TCTTCCEEEEESCTTCCEEC----SSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTC
T ss_pred -ccchhhhhhhccccccceee----ccccccccccccccccccccccccccccccccccccccccchhhhcccccccccc
Confidence 57899999999998876443 46789999999999764 6788888888999999999999999998776532 34
Q ss_pred CCCCCcEEEcCCCcCcccCCCcccCCC-ccCEEEccCCCCcccCcccccCcccCcEEEcCCCCCCCcCCCccccccccCC
Q psy16110 264 GPRALRILSMAYNRIGTLKADSFLSQR-WLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGL 342 (719)
Q Consensus 264 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~-~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l 342 (719)
.+..+..+..+++.+..+.+..|.+++ .++.|++++|+++.+...+|.....++.+.+++|.++.++.. .|.++
T Consensus 126 ~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~-----~f~~l 200 (242)
T d1xwdc1 126 SLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPND-----VFHGA 200 (242)
T ss_dssp BSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEEECTTCTTCCCCCTT-----TTTTS
T ss_pred cccccccccccccccccccccccccccccceeeecccccccccccccccchhhhccccccccccccccHH-----HhcCC
Confidence 556677777788888888877777764 788899999999988877766544444556788889888776 45678
Q ss_pred CCCCEEeCCCCCCCccccccc
Q psy16110 343 AKIHILNLGYNRLNKLNSDTF 363 (719)
Q Consensus 343 ~~L~~L~L~~n~l~~i~~~~f 363 (719)
++|++|++++|+++.++...|
T Consensus 201 ~~L~~L~Ls~N~l~~l~~~~~ 221 (242)
T d1xwdc1 201 SGPVILDISRTRIHSLPSYGL 221 (242)
T ss_dssp CCCSEEECTTSCCCCCCSSSC
T ss_pred CCCCEEECCCCcCCccCHHHH
Confidence 899999999999887765544
No 14
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=5.6e-20 Score=180.91 Aligned_cols=218 Identities=16% Similarity=0.132 Sum_probs=118.4
Q ss_pred EEeCcCCCCCCCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCCcCCC-CChhhhcCCCCCCEEeCCC
Q psy16110 451 HLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTE-IPEMMFKNLLNLTYLDLSN 529 (719)
Q Consensus 451 ~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~ 529 (719)
.++.++. .++++|.+.+ +++++|++++|.++.++..+|.++++|++|++++|.+.. ++..+|..++.++++.+..
T Consensus 12 ~i~c~~~-~l~~iP~~l~---~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 12 VFLCQES-KVTEIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp EEEEESC-SCSSCCSCSC---SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred EEEEeCC-CCCCcCCCCC---CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 4444444 4555554432 345666666666666665566666666666666665543 4444566666666666543
Q ss_pred -CccccccCCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCC-CccEEEcCCC
Q psy16110 530 -NNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHS-KLKTLKLAFN 607 (719)
Q Consensus 530 -n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~n 607 (719)
|.+....+..|.++++|+++++++|.+...+...+. ..++.+..+..+++.+..+.+..|..++ .++.|++++|
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~----~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n 163 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKI----HSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN 163 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTT----CBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSS
T ss_pred cccccccccccccccccccccccchhhhccccccccc----ccccccccccccccccccccccccccccccceeeecccc
Confidence 455555556666666666666666666544332211 1234444555555555555555555443 5556666666
Q ss_pred CCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEEC
Q psy16110 608 KFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINL 676 (719)
Q Consensus 608 ~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 676 (719)
+++.++..++.....++.+++++|+++.++...|.++++|++|++++|+++.+++..|.++++|+.+++
T Consensus 164 ~l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 164 GIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp CCCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSE
T ss_pred cccccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcC
Confidence 666555554433222223344555566555555566666666666666666555555555555554444
No 15
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.78 E-value=2e-19 Score=169.81 Aligned_cols=138 Identities=27% Similarity=0.445 Sum_probs=84.8
Q ss_pred CCCcccccccCCCCcccccccccccCCCCCCCCCCCCchhhhhcccccCCcCccccccCCCCcccEEEcCCCCccc-cCc
Q psy16110 103 DFPYPCRCKKMSESQLAMDCDNVAFPNGEYPTLPYGLNLVTFSQRWVGHQILPMQIFSSSDIPIRRLDFSGNALRR-LSD 181 (719)
Q Consensus 103 ~~~~~C~c~~~~~~~~~~~c~~~~l~~~~~~~~p~~~~~~~l~~~~~~~~~lp~~~~~~~~~~L~~L~Ls~n~i~~-l~~ 181 (719)
+||..|.|.. ..|+|.+.+++ .||. .++ .++++|+|++|+|++ ++.
T Consensus 1 ~CP~~C~C~~-----~~v~Cs~~~L~-----~iP~-------------------~lp----~~l~~L~Ls~N~i~~~~~~ 47 (192)
T d1w8aa_ 1 DCPAMCHCEG-----TTVDCTGRGLK-----EIPR-------------------DIP----LHTTELLLNDNELGRISSD 47 (192)
T ss_dssp CCCTTSEEET-----TEEECTTSCCS-----SCCS-------------------CCC----TTCSEEECCSCCCCSBCCS
T ss_pred CcCCCCEEcC-----CEEEEeCCCcC-----ccCC-------------------CCC----CCCCEEEeCCCCCcccccc
Confidence 3677899973 57889876665 3333 232 248888999888874 556
Q ss_pred ccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCC
Q psy16110 182 KLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVS 261 (719)
Q Consensus 182 ~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~ 261 (719)
..|. .+++|++|+|++|.+.. +.++.|..+++|++|+|++|+|+.+++++|.++++|++|+|++|+|+.+++.+
T Consensus 48 ~~f~-~l~~L~~L~L~~N~i~~-----~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~ 121 (192)
T d1w8aa_ 48 GLFG-RLPHLVKLELKRNQLTG-----IEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGS 121 (192)
T ss_dssp CSGG-GCTTCCEEECCSSCCCC-----BCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTS
T ss_pred cccC-CCceEeeeecccccccc-----ccccccccccccceeeeccccccccCHHHHhCCCcccccccCCccccccCHHH
Confidence 6553 44566666666666654 22345556666666666666666666655666666666666666666665555
Q ss_pred CCCCCCCcEEEcCCCcCc
Q psy16110 262 LNGPRALRILSMAYNRIG 279 (719)
Q Consensus 262 l~~l~~L~~L~Ls~n~i~ 279 (719)
|..+++|++|+|++|.+.
T Consensus 122 f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 122 FEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp STTCTTCCEEECTTCCBC
T ss_pred hcCCcccccccccccccc
Confidence 555555555555555543
No 16
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=6e-22 Score=214.46 Aligned_cols=390 Identities=18% Similarity=0.128 Sum_probs=182.6
Q ss_pred CCcEEEcCCCcCcccCC-CcccCCCccCEEEccCCCCcccC----cccccCcccCcEEEcCCCCCCCcCCCccccccccC
Q psy16110 267 ALRILSMAYNRIGTLKA-DSFLSQRWLERIILRGNRLTTIE----GGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNG 341 (719)
Q Consensus 267 ~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~----~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~ 341 (719)
+|++||+++|+++.... ..+..+++++.|+|++|.++... ..++..+++|++|+|++|+++..+...+.......
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 35566666666554321 22344566666666666655322 23345566666666666666432222111100112
Q ss_pred CCCCCEEeCCCCCCCccccccccCcccccccccccCCCccEEECCCCCCcCcCCcchh-------ccCCEEEccCCcccc
Q psy16110 342 LAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLE-------DTLDNLNVRDNQITT 414 (719)
Q Consensus 342 l~~L~~L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~-------~~L~~L~l~~n~l~~ 414 (719)
..+|++|++++|+++..+.. .++..+..+++|++|++++|.+.+....... ............+..
T Consensus 83 ~~~L~~L~L~~n~it~~~~~-------~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 155 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCG-------VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSA 155 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHH-------HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG
T ss_pred CCCCCEEECCCCCccccccc-------cccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccch
Confidence 34567777777666543211 1233455566677777776665543221111 111222222221111
Q ss_pred ccc-----CccCCCCccEEEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCCCCCCCCC-
Q psy16110 415 LSS-----SALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIP- 488 (719)
Q Consensus 415 ~~~-----~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~- 488 (719)
... .......++.++++++.........+.. ...........+++..+.+....
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~--------------------~l~~~~~~~~~l~~~~~~~~~~~~ 215 (460)
T d1z7xw1 156 ASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQ--------------------GLKDSPCQLEALKLESCGVTSDNC 215 (460)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHH--------------------HHHHSCCCCCEEECTTSCCBTTHH
T ss_pred hhhccccccccccccccccccccccccccccccccc--------------------ccccccccccccccccccccchhh
Confidence 100 0001334445555444332110000000 00000112333444444333211
Q ss_pred ---chhhcCCCCccEEEccCCcCCC-----CChhhhcCCCCCCEEeCCCCcccccc----CCccCCCCCCCEEEccCCcC
Q psy16110 489 ---QYQFDELLNLKYLCLAHNHLTE-----IPEMMFKNLLNLTYLDLSNNNIVNLR----VGSLYGLPSMKRLDLSFNKL 556 (719)
Q Consensus 489 ---~~~~~~~~~L~~L~L~~n~l~~-----~~~~~~~~l~~L~~L~Ls~n~i~~~~----~~~l~~l~~L~~L~L~~n~l 556 (719)
...+.....++.+++.+|.+.. .....+.....++.+++++|.+.... ...+...+.++.+++++|.+
T Consensus 216 ~~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i 295 (460)
T d1z7xw1 216 RDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 295 (460)
T ss_dssp HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCC
T ss_pred hcccccccccccccccchhhccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 1123344556666666665431 11122334556666666666654321 12233456666666666665
Q ss_pred CcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcC----cccCCCCccEEEcCCCCCCCcCh----hhh-cCCCCCCEEE
Q psy16110 557 TTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPS----SFTIHSKLKTLKLAFNKFNYFPK----ELI-LGLSYLQEID 627 (719)
Q Consensus 557 ~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~----~~~~l~~L~~L~L~~n~l~~~~~----~~l-~~l~~L~~L~ 627 (719)
++.....+........+.|+.+++++|.++..... .+...++|++|+|++|+++.... +++ ...+.|++|+
T Consensus 296 ~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~ 375 (460)
T d1z7xw1 296 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLW 375 (460)
T ss_dssp HHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEE
T ss_pred cccccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEE
Confidence 43221111000001125677777777776654222 23345677778887777764221 112 3456788888
Q ss_pred CCCCCCcccC----cccCCCCCCCCEEeCCCCcCCCCCcc----cCC-CCCCCcEEECCCCcCCC
Q psy16110 628 LSNNQLKTID----DYDYGYLPRLRKLNLNNNNIDAISET----CFF-NSSQLQIINLSFNRLEK 683 (719)
Q Consensus 628 Ls~n~l~~~~----~~~l~~l~~L~~L~Ls~N~l~~~~~~----~~~-~l~~L~~L~Ls~N~l~~ 683 (719)
|++|.++... ...+..+++|++|+|++|+|+..... .+. +...|+.|++++|.+..
T Consensus 376 Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~ 440 (460)
T d1z7xw1 376 LADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 440 (460)
T ss_dssp CTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred CCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCH
Confidence 8888776421 22345567788888888877653221 122 33468888888887764
No 17
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.78 E-value=1.1e-18 Score=169.50 Aligned_cols=186 Identities=24% Similarity=0.333 Sum_probs=104.0
Q ss_pred CCCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCC
Q psy16110 494 ELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTS 573 (719)
Q Consensus 494 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~ 573 (719)
.+.+|+.|++.+|.++++.. +..+++|++|++++|++++..+ +..+++|+++++++|.+++++. + ..++
T Consensus 39 ~l~~L~~L~l~~~~i~~l~~--l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~i~~--l-----~~l~ 107 (227)
T d1h6ua2 39 DLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNVSA--I-----AGLQ 107 (227)
T ss_dssp HHHTCCEEECTTSCCCCCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCCGG--G-----TTCT
T ss_pred HcCCcCEEECCCCCCCcchh--HhcCCCCcEeecCCceeecccc--cccccccccccccccccccccc--c-----cccc
Confidence 34455555555555555532 4555555555555555555432 4555555666665555554331 1 1235
Q ss_pred CCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCC
Q psy16110 574 SLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLN 653 (719)
Q Consensus 574 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls 653 (719)
+|+.++++++...+. ..+...+.++.+.++++.+....+ +.++++|+.|++++|.+....+ ++++++|++|+++
T Consensus 108 ~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~L~~L~l~~n~~~~~~~--l~~l~~L~~L~Ls 181 (227)
T d1h6ua2 108 SIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKAD 181 (227)
T ss_dssp TCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred ccccccccccccccc--chhccccchhhhhchhhhhchhhh--hccccccccccccccccccchh--hcccccceecccC
Confidence 566666665555443 224455566666666665554432 4455666666666666654433 5566666666666
Q ss_pred CCcCCCCCcccCCCCCCCcEEECCCCcCCCcChHhhcCcccc-EEecC
Q psy16110 654 NNNIDAISETCFFNSSQLQIINLSFNRLEKLPERLFNTFLYT-NYDMA 700 (719)
Q Consensus 654 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~L~l~ 700 (719)
+|+++++++ +..+++|++|+|++|+++++++ |+++++| .|+++
T Consensus 182 ~n~l~~l~~--l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 182 DNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (227)
T ss_dssp SSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred CCccCCChh--hcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence 666665543 5556666666666666666654 5666666 66654
No 18
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.76 E-value=4.9e-18 Score=164.93 Aligned_cols=202 Identities=22% Similarity=0.333 Sum_probs=111.1
Q ss_pred EEccCCCCCCcCcccccCCCcCcEEeCcCCCCCCCCCCCCCCCCCCccEEEcCCCCCCCCCchhhcCCCCccEEEccCCc
Q psy16110 428 LDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNH 507 (719)
Q Consensus 428 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~~l~~l~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~L~~n~ 507 (719)
++++.++++++. .+..+.+|+.|++.+| .+++++. +..+++|++|++++|.++.+.+ +..+++++++++++|.
T Consensus 24 ~~l~~~~~~d~~--~~~~l~~L~~L~l~~~-~i~~l~~--l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~ 96 (227)
T d1h6ua2 24 IAAGKSNVTDTV--TQADLDGITTLSAFGT-GVTTIEG--VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP 96 (227)
T ss_dssp HHTTCSSTTSEE--CHHHHHTCCEEECTTS-CCCCCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC
T ss_pred HHhCCCCcCCcC--CHHHcCCcCEEECCCC-CCCcchh--HhcCCCCcEeecCCceeecccc--cccccccccccccccc
Confidence 344444444432 2334455555555555 4444431 4445555555555555444432 3444445555554444
Q ss_pred CCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCC
Q psy16110 508 LTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTY 587 (719)
Q Consensus 508 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 587 (719)
++.++ .+.++++|+.++++++....+.... ..+.++.++++++.+..
T Consensus 97 ~~~i~--------------------------~l~~l~~L~~l~l~~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~ 143 (227)
T d1h6ua2 97 LKNVS--------------------------AIAGLQSIKTLDLTSTQITDVTPLA-------GLSNLQVLYLDLNQITN 143 (227)
T ss_dssp CSCCG--------------------------GGTTCTTCCEEECTTSCCCCCGGGT-------TCTTCCEEECCSSCCCC
T ss_pred ccccc--------------------------cccccccccccccccccccccchhc-------cccchhhhhchhhhhch
Confidence 44433 2444455555555554443322111 12555666666665554
Q ss_pred cCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCC
Q psy16110 588 LFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFN 667 (719)
Q Consensus 588 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 667 (719)
.. .+..+++|++|++++|.+...++ ++++++|++|++++|+++++++ ++++++|++|++++|+++++++ +.+
T Consensus 144 ~~--~~~~~~~L~~L~l~~n~~~~~~~--l~~l~~L~~L~Ls~n~l~~l~~--l~~l~~L~~L~Ls~N~lt~i~~--l~~ 215 (227)
T d1h6ua2 144 IS--PLAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LAN 215 (227)
T ss_dssp CG--GGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTT
T ss_pred hh--hhccccccccccccccccccchh--hcccccceecccCCCccCCChh--hcCCCCCCEEECcCCcCCCCcc--ccc
Confidence 32 25556667777777776665443 5667777777777777776543 5667777777777777776654 667
Q ss_pred CCCCcEEECC
Q psy16110 668 SSQLQIINLS 677 (719)
Q Consensus 668 l~~L~~L~Ls 677 (719)
+++|+.|+++
T Consensus 216 l~~L~~L~ls 225 (227)
T d1h6ua2 216 TSNLFIVTLT 225 (227)
T ss_dssp CTTCCEEEEE
T ss_pred CCCCCEEEee
Confidence 7777777775
No 19
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=4.2e-22 Score=215.66 Aligned_cols=62 Identities=18% Similarity=0.213 Sum_probs=34.6
Q ss_pred cccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccC----cCccCCCccCcEEECCCCcCC
Q psy16110 190 TLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIE----EGILKGCDNLLELRMDHNRFT 255 (719)
Q Consensus 190 ~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~ 255 (719)
+|++||+++|++++.. -.+-+..++++++|+|++|.++... ..++..+++|++|+|++|.|+
T Consensus 3 ~l~~ld~~~~~i~~~~----~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~ 68 (460)
T d1z7xw1 3 DIQSLDIQCEELSDAR----WAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELG 68 (460)
T ss_dssp EEEEEEEESCCCCHHH----HHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCH
T ss_pred CCCEEEeeCCcCChHH----HHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCC
Confidence 5677777777776410 0122445667777777777665322 123445566666666666554
No 20
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.75 E-value=7.7e-18 Score=158.74 Aligned_cols=176 Identities=22% Similarity=0.285 Sum_probs=93.9
Q ss_pred CEEeCCCCccccccCCccCCCCCCCEEEccCCcCCc-ccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccE
Q psy16110 523 TYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTT-FKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKT 601 (719)
Q Consensus 523 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 601 (719)
++++.++++++.++. .+ .+++++|+|++|+++. ++...|. .+++|++|++++|.+..+.+..|..+++|++
T Consensus 11 ~~v~Cs~~~L~~iP~-~l--p~~l~~L~Ls~N~i~~~~~~~~f~-----~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~ 82 (192)
T d1w8aa_ 11 TTVDCTGRGLKEIPR-DI--PLHTTELLLNDNELGRISSDGLFG-----RLPHLVKLELKRNQLTGIEPNAFEGASHIQE 82 (192)
T ss_dssp TEEECTTSCCSSCCS-CC--CTTCSEEECCSCCCCSBCCSCSGG-----GCTTCCEEECCSSCCCCBCTTTTTTCTTCCE
T ss_pred CEEEEeCCCcCccCC-CC--CCCCCEEEeCCCCCcccccccccC-----CCceEeeeeccccccccccccccccccccce
Confidence 455666666655422 22 1456666666666643 2233332 2356666666666666665566666666666
Q ss_pred EEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCcC
Q psy16110 602 LKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRL 681 (719)
Q Consensus 602 L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 681 (719)
|++++|+++.+++.+|.++++|++|+|++|+|+++++.+|..+++|++|+|++|++.......+. ...++.+.+..+.+
T Consensus 83 L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~-~~~l~~~~l~~~~~ 161 (192)
T d1w8aa_ 83 LQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWF-AEWLRKKSLNGGAA 161 (192)
T ss_dssp EECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHH-HHHHHHHCCSGGGC
T ss_pred eeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHHH-hhhhhhhcccCCCe
Confidence 66666666666665566666666666666666666665566666666666666665543321100 12234444445555
Q ss_pred CCcChHhhcCcccc-EEecCCCceeeeccCCCccccCC
Q psy16110 682 EKLPERLFNTFLYT-NYDMAPNLVFQSHLSGHRCECAQ 718 (719)
Q Consensus 682 ~~i~~~~~~~l~~L-~L~l~~N~l~~~~~~~~~C~c~~ 718 (719)
+...+ ..+..+ .++++.|.+ .|.+++
T Consensus 162 ~c~~p---~~l~~~~l~~L~~n~l--------~C~~~~ 188 (192)
T d1w8aa_ 162 RCGAP---SKVRDVQIKDLPHSEF--------KCSSEN 188 (192)
T ss_dssp BBCSS---TTTTTSBGGGSCTTTC--------CCCCC-
T ss_pred EeCCC---hhhcCCEeeecCHhhC--------cCCCCC
Confidence 43222 223345 556677766 677654
No 21
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.74 E-value=8.6e-18 Score=159.40 Aligned_cols=167 Identities=21% Similarity=0.343 Sum_probs=114.0
Q ss_pred cEEEcCCCCccccCcccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccCcE
Q psy16110 167 RRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLE 246 (719)
Q Consensus 167 ~~L~Ls~n~i~~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 246 (719)
..+.++.+.++.+... ..++++++|++++|.+.. + +.++.+++|++|++++|+++.+++ ++++++|++
T Consensus 21 i~~~l~~~~~~~~~~~---~~l~~l~~L~l~~~~i~~-----l--~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~ 88 (199)
T d2omxa2 21 MKTVLGKTNVTDTVSQ---TDLDQVTTLQADRLGIKS-----I--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVD 88 (199)
T ss_dssp HHHHTTCSSTTSEECH---HHHTTCCEEECTTSCCCC-----C--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred HHHHhCCCCCCCccCH---HHhcCCCEEECCCCCCCC-----c--cccccCCCcCcCccccccccCccc--ccCCccccc
Confidence 3445666666654322 235677777777777764 1 246667788888888887777654 677777888
Q ss_pred EECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCcEEEcCCCCC
Q psy16110 247 LRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRL 326 (719)
Q Consensus 247 L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 326 (719)
|++++|.+..++. +.++++|+.|+++++.+..+. .+..+++|+.|++++|.+..++ .+..+++|++|++.+|++
T Consensus 89 L~l~~n~~~~~~~--l~~l~~L~~L~l~~~~~~~~~--~~~~l~~L~~L~l~~n~l~~~~--~l~~~~~L~~L~l~~n~l 162 (199)
T d2omxa2 89 ILMNNNQIADITP--LANLTNLTGLTLFNNQITDID--PLKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLNFSSNQV 162 (199)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCC
T ss_pred ccccccccccccc--ccccccccccccccccccccc--ccchhhhhHHhhhhhhhhcccc--cccccccccccccccccc
Confidence 8888777777763 667777777777777776653 3666777777777777776553 466777777777777777
Q ss_pred CCcCCCccccccccCCCCCCEEeCCCCCCCcc
Q psy16110 327 NKLNSDTFQGGAFNGLAKIHILNLGYNRLNKL 358 (719)
Q Consensus 327 ~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~i 358 (719)
++++ .+.++++|++|++++|+++++
T Consensus 163 ~~l~-------~l~~l~~L~~L~ls~N~i~~i 187 (199)
T d2omxa2 163 TDLK-------PLANLTTLERLDISSNKVSDI 187 (199)
T ss_dssp CCCG-------GGTTCTTCCEEECCSSCCCCC
T ss_pred cCCc-------cccCCCCCCEEECCCCCCCCC
Confidence 6654 255667777777777776554
No 22
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=4.1e-17 Score=154.65 Aligned_cols=149 Identities=24% Similarity=0.370 Sum_probs=69.6
Q ss_pred CCCccEEEccCCcCCCCChhhhcCCCCCCEEeCCCCccccccCCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCC
Q psy16110 495 LLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSS 574 (719)
Q Consensus 495 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~ 574 (719)
+.++++|++++|.++++.. ++.+++|++|++++|+++++.+ +.++++|++|++++|.+..+++ + ..++.
T Consensus 39 l~~l~~L~l~~~~i~~l~~--l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~~~--l-----~~l~~ 107 (199)
T d2omxa2 39 LDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--L-----ANLTN 107 (199)
T ss_dssp HTTCCEEECTTSCCCCCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--G-----TTCTT
T ss_pred hcCCCEEECCCCCCCCccc--cccCCCcCcCccccccccCccc--ccCCcccccccccccccccccc--c-----ccccc
Confidence 3455555555555555432 3445555555555555555432 4455555555555555443321 1 12344
Q ss_pred CcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCC
Q psy16110 575 LEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNN 654 (719)
Q Consensus 575 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~ 654 (719)
|+.|++++|.+.... .+..+++|+.|++++|++..++ .+..+++|+.|++++|+++++++ ++++++|++|++++
T Consensus 108 L~~L~l~~~~~~~~~--~~~~l~~L~~L~l~~n~l~~~~--~l~~~~~L~~L~l~~n~l~~l~~--l~~l~~L~~L~ls~ 181 (199)
T d2omxa2 108 LTGLTLFNNQITDID--PLKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISS 181 (199)
T ss_dssp CSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred ccccccccccccccc--ccchhhhhHHhhhhhhhhcccc--cccccccccccccccccccCCcc--ccCCCCCCEEECCC
Confidence 555555544444331 2344444444444444444332 13444444444444444444332 34444444444444
Q ss_pred CcCCCC
Q psy16110 655 NNIDAI 660 (719)
Q Consensus 655 N~l~~~ 660 (719)
|+++++
T Consensus 182 N~i~~i 187 (199)
T d2omxa2 182 NKVSDI 187 (199)
T ss_dssp SCCCCC
T ss_pred CCCCCC
Confidence 444443
No 23
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=4.2e-17 Score=155.92 Aligned_cols=164 Identities=24% Similarity=0.369 Sum_probs=101.1
Q ss_pred hccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCCCCCCC
Q psy16110 188 RDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRA 267 (719)
Q Consensus 188 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~~ 267 (719)
+.+|++|++++|.+.+. ..+..+++|++|+|++|+++.+++ ++++++|++|++++|+++.++. +.++++
T Consensus 45 L~~L~~L~l~~~~i~~l-------~~l~~l~~L~~L~L~~n~i~~l~~--~~~l~~L~~L~l~~n~i~~l~~--l~~l~~ 113 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSV-------QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSS--LKDLKK 113 (210)
T ss_dssp HHTCCEEECTTSCCCCC-------TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGGG--GTTCTT
T ss_pred hcCccEEECcCCCCCCc-------hhHhhCCCCCEEeCCCccccCccc--cccCcccccccccccccccccc--cccccc
Confidence 45667777777666541 135566777777777777666553 4566777777777777766653 566677
Q ss_pred CcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCCE
Q psy16110 268 LRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHI 347 (719)
Q Consensus 268 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~ 347 (719)
|+.|++++|.+..+. .+..+++++.+++++|.+++.. .+..+++|+++++++|+++++.+ +.++++|++
T Consensus 114 L~~L~l~~~~~~~~~--~l~~l~~l~~l~~~~n~l~~~~--~~~~l~~L~~l~l~~n~l~~i~~-------l~~l~~L~~ 182 (210)
T d1h6ta2 114 LKSLSLEHNGISDIN--GLVHLPQLESLYLGNNKITDIT--VLSRLTKLDTLSLEDNQISDIVP-------LAGLTKLQN 182 (210)
T ss_dssp CCEEECTTSCCCCCG--GGGGCTTCCEEECCSSCCCCCG--GGGGCTTCSEEECCSSCCCCCGG-------GTTCTTCCE
T ss_pred ccccccccccccccc--cccccccccccccccccccccc--ccccccccccccccccccccccc-------ccCCCCCCE
Confidence 777777776665543 3566666677777766665543 34556666677776666665432 445666666
Q ss_pred EeCCCCCCCccccccccCcccccccccccCCCccEEECC
Q psy16110 348 LNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLN 386 (719)
Q Consensus 348 L~L~~n~l~~i~~~~f~~~~~~~~~~l~~~~~L~~L~L~ 386 (719)
|++++|++++++ .+..+++|++|+++
T Consensus 183 L~Ls~N~i~~l~-------------~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 183 LYLSKNHISDLR-------------ALAGLKNLDVLELF 208 (210)
T ss_dssp EECCSSCCCBCG-------------GGTTCTTCSEEEEE
T ss_pred EECCCCCCCCCh-------------hhcCCCCCCEEEcc
Confidence 666666665432 13345566666654
No 24
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71 E-value=5.2e-17 Score=155.26 Aligned_cols=163 Identities=25% Similarity=0.357 Sum_probs=142.8
Q ss_pred cccEEEcCCCCccccCcccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCccC
Q psy16110 165 PIRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNL 244 (719)
Q Consensus 165 ~L~~L~Ls~n~i~~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 244 (719)
++++|++++|.++.++. + ..+++|++|+|++|.+++. ..++++++|++|++++|+++.++. +.++++|
T Consensus 47 ~L~~L~l~~~~i~~l~~--l-~~l~~L~~L~L~~n~i~~l-------~~~~~l~~L~~L~l~~n~i~~l~~--l~~l~~L 114 (210)
T d1h6ta2 47 SIDQIIANNSDIKSVQG--I-QYLPNVTKLFLNGNKLTDI-------KPLANLKNLGWLFLDENKVKDLSS--LKDLKKL 114 (210)
T ss_dssp TCCEEECTTSCCCCCTT--G-GGCTTCCEEECCSSCCCCC-------GGGTTCTTCCEEECCSSCCCCGGG--GTTCTTC
T ss_pred CccEEECcCCCCCCchh--H-hhCCCCCEEeCCCccccCc-------cccccCcccccccccccccccccc--ccccccc
Confidence 59999999999998874 3 3679999999999999862 247889999999999999998863 8899999
Q ss_pred cEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCcccccCcccCcEEEcCCC
Q psy16110 245 LELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYN 324 (719)
Q Consensus 245 ~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 324 (719)
+.|++++|.+..++. +..+++++.+++++|.++... .+..+++|+++++++|+++++.+ +.++++|++|++++|
T Consensus 115 ~~L~l~~~~~~~~~~--l~~l~~l~~l~~~~n~l~~~~--~~~~l~~L~~l~l~~n~l~~i~~--l~~l~~L~~L~Ls~N 188 (210)
T d1h6ta2 115 KSLSLEHNGISDING--LVHLPQLESLYLGNNKITDIT--VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 188 (210)
T ss_dssp CEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCG--GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred ccccccccccccccc--ccccccccccccccccccccc--ccccccccccccccccccccccc--ccCCCCCCEEECCCC
Confidence 999999999988874 788999999999999998764 47789999999999999998754 889999999999999
Q ss_pred CCCCcCCCccccccccCCCCCCEEeCCC
Q psy16110 325 RLNKLNSDTFQGGAFNGLAKIHILNLGY 352 (719)
Q Consensus 325 ~l~~~~~~~~~~~~l~~l~~L~~L~L~~ 352 (719)
++++++ .+..+++|++|+|++
T Consensus 189 ~i~~l~-------~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 189 HISDLR-------ALAGLKNLDVLELFS 209 (210)
T ss_dssp CCCBCG-------GGTTCTTCSEEEEEE
T ss_pred CCCCCh-------hhcCCCCCCEEEccC
Confidence 998875 377899999999863
No 25
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=2.4e-15 Score=136.55 Aligned_cols=132 Identities=19% Similarity=0.225 Sum_probs=86.3
Q ss_pred cccCCCCCCEEECcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCcc
Q psy16110 213 EFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWL 292 (719)
Q Consensus 213 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 292 (719)
.|.++.++++|+|++|+|+.++ ..+..+++|++|++++|.|++++. +..+++|++|++++|.++.+++..+..+++|
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~i~-~~~~~l~~L~~L~Ls~N~i~~l~~--~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPVIE-NLGATLDQFDAIDFSDNEIRKLDG--FPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp EEECTTSCEEEECTTSCCCSCC-CGGGGTTCCSEEECCSSCCCEECC--CCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hccCcCcCcEEECCCCCCCccC-ccccccccCCEEECCCCCCCccCC--cccCcchhhhhcccccccCCCcccccccccc
Confidence 3556667777777777777774 345667777777777777777653 6677777777777777777766666667777
Q ss_pred CEEEccCCCCcccCc-ccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCCEEe
Q psy16110 293 ERIILRGNRLTTIEG-GAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILN 349 (719)
Q Consensus 293 ~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~ 349 (719)
++|++++|+++.+.. ..+..+++|++|++++|+++..+.. ....+..+++|+.||
T Consensus 90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~--r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 90 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHY--RLYVIYKVPQVRVLD 145 (162)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTH--HHHHHHHCTTCSEET
T ss_pred ccceeccccccccccccccccccccchhhcCCCccccccch--HHHHHHHCCCcCeeC
Confidence 777777777766543 4566677777777777766554421 001244556666665
No 26
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.54 E-value=1.3e-14 Score=125.11 Aligned_cols=115 Identities=27% Similarity=0.381 Sum_probs=89.0
Q ss_pred cEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeCCCC
Q psy16110 576 EELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNN 655 (719)
Q Consensus 576 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N 655 (719)
++|||++|+++.. + .++.+++|++|++++|+++.+|+. ++.+++|++|++++|.+++++. +..+++|++|++++|
T Consensus 1 R~L~Ls~n~l~~l-~-~l~~l~~L~~L~ls~N~l~~lp~~-~~~l~~L~~L~l~~N~i~~l~~--~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTVL-C-HLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALENVDG--VANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSSC-C-CGGGGTTCCEEECCSSCCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCCCC-c-ccccCCCCCEEECCCCccCcchhh-hhhhhcccccccccccccccCc--cccccccCeEECCCC
Confidence 4688888888766 3 477888888888888888888754 6788888888888888887753 788888888888888
Q ss_pred cCCCCCc-ccCCCCCCCcEEECCCCcCCCc---ChHhhcCcccc
Q psy16110 656 NIDAISE-TCFFNSSQLQIINLSFNRLEKL---PERLFNTFLYT 695 (719)
Q Consensus 656 ~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~i---~~~~~~~l~~L 695 (719)
++++++. ..+..+++|++|++++|+++.+ +..+...+++|
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L 119 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 119 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCc
Confidence 8887753 4577788888888888887643 45555556666
No 27
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=4.7e-15 Score=134.54 Aligned_cols=128 Identities=21% Similarity=0.292 Sum_probs=74.5
Q ss_pred cCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCcCcCcccCCCCccEEEcCCCCCCCcChhhhcC
Q psy16110 540 LYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILG 619 (719)
Q Consensus 540 l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 619 (719)
+.+..++++|+|++|+++.++. .+. .+++|+.||+++|+++.+ ..|..+++|++|++++|+++.+++..+..
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i~~-~~~-----~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~ 85 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVIEN-LGA-----TLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQA 85 (162)
T ss_dssp EECTTSCEEEECTTSCCCSCCC-GGG-----GTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHH
T ss_pred ccCcCcCcEEECCCCCCCccCc-ccc-----ccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCcccccc
Confidence 4455566777777776666542 222 235666666666666655 23566666666666666666666555555
Q ss_pred CCCCCEEECCCCCCcccCc-ccCCCCCCCCEEeCCCCcCCCCCc---ccCCCCCCCcEEE
Q psy16110 620 LSYLQEIDLSNNQLKTIDD-YDYGYLPRLRKLNLNNNNIDAISE---TCFFNSSQLQIIN 675 (719)
Q Consensus 620 l~~L~~L~Ls~n~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~ 675 (719)
+++|++|++++|++..+.. ..+..+++|++|++++|+++..+. ..+..+++|++||
T Consensus 86 l~~L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 86 LPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp CTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred ccccccceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 6666666666666655432 235556666666666666655442 2344455666555
No 28
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.52 E-value=1.7e-14 Score=124.30 Aligned_cols=85 Identities=24% Similarity=0.368 Sum_probs=33.6
Q ss_pred CCCccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccCEEEccCCCCcccCc-ccccCcccCc
Q psy16110 239 KGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEG-GAFNGLAKIH 317 (719)
Q Consensus 239 ~~l~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~ 317 (719)
.++++|++|++++|.++++|+ .++.+++|++|++++|.|+.++ .+..+++|++|++++|+++.++. ..+..+++|+
T Consensus 17 ~~l~~L~~L~ls~N~l~~lp~-~~~~l~~L~~L~l~~N~i~~l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~ 93 (124)
T d1dcea3 17 EQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALENVD--GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLV 93 (124)
T ss_dssp GGGTTCCEEECCSSCCCCCCG-GGGGCTTCCEEECCSSCCCCCG--GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCC
T ss_pred ccCCCCCEEECCCCccCcchh-hhhhhhcccccccccccccccC--ccccccccCeEECCCCccCCCCCchhhcCCCCCC
Confidence 334444444444444444432 2333444444444444443332 13334444444444444433321 2333344444
Q ss_pred EEEcCCCCC
Q psy16110 318 ILNLGYNRL 326 (719)
Q Consensus 318 ~L~L~~n~l 326 (719)
+|++++|++
T Consensus 94 ~L~l~~N~i 102 (124)
T d1dcea3 94 LLNLQGNSL 102 (124)
T ss_dssp EEECTTSGG
T ss_pred EEECCCCcC
Confidence 444444443
No 29
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=2.6e-14 Score=128.64 Aligned_cols=107 Identities=20% Similarity=0.229 Sum_probs=57.7
Q ss_pred CCcEEECcCCCCCCcCcCcccCCCCccEEEcCCC-CCCCcChhhhcCCCCCCEEECCCCCCcccCcccCCCCCCCCEEeC
Q psy16110 574 SLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFN-KFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNL 652 (719)
Q Consensus 574 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L 652 (719)
..+.++.+++.+... |..+..+++|++|++++| .++.+++.+|.++++|+.|++++|+|+.+++.+|.++++|++|+|
T Consensus 9 ~~~~l~c~~~~~~~~-p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 87 (156)
T d2ifga3 9 GSSGLRCTRDGALDS-LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (156)
T ss_dssp SSSCEECCSSCCCTT-TTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CCCeEEecCCCCccC-cccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceec
Confidence 344566666555554 444555555555555443 355555555555555555555555555555555555555555555
Q ss_pred CCCcCCCCCcccCCCCCCCcEEECCCCcCC
Q psy16110 653 NNNNIDAISETCFFNSSQLQIINLSFNRLE 682 (719)
Q Consensus 653 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 682 (719)
++|+|+.+++..|... +|++|+|++|++.
T Consensus 88 s~N~l~~l~~~~~~~~-~l~~L~L~~Np~~ 116 (156)
T d2ifga3 88 SFNALESLSWKTVQGL-SLQELVLSGNPLH 116 (156)
T ss_dssp CSSCCSCCCSTTTCSC-CCCEEECCSSCCC
T ss_pred cCCCCcccChhhhccc-cccccccCCCccc
Confidence 5555555555444432 4555555555554
No 30
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.45 E-value=1.5e-14 Score=149.53 Aligned_cols=242 Identities=16% Similarity=0.156 Sum_probs=137.4
Q ss_pred ccccCCCcCcEEeCcCCCCCCCCCC----CCCCCCCCccEEEcCCCCCCCCC----------chhhcCCCCccEEEccCC
Q psy16110 441 TAFTNVPTLLHLNLSRNAHLSSLPV----GGFDPLKKLEVLDLAATGLKSIP----------QYQFDELLNLKYLCLAHN 506 (719)
Q Consensus 441 ~~~~~l~~L~~L~L~~n~~l~~l~~----~~~~~l~~L~~L~ls~n~l~~~~----------~~~~~~~~~L~~L~L~~n 506 (719)
..+....+|+.|+|++| .++.-.. ..+...++|+.++++++...... ...+..+++|+.|++++|
T Consensus 25 ~~L~~~~~l~~L~Ls~n-~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n 103 (344)
T d2ca6a1 25 AVLLEDDSVKEIVLSGN-TIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 103 (344)
T ss_dssp HHHHHCSCCCEEECTTS-EECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHhhCCCCCEEECcCC-cCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccc
Confidence 34566788899999888 4433211 12455678888888877554322 123455678888888888
Q ss_pred cCCCCChh----hhcCCCCCCEEeCCCCccccccCCc-------------cCCCCCCCEEEccCCcCCcccCCcCCCCCC
Q psy16110 507 HLTEIPEM----MFKNLLNLTYLDLSNNNIVNLRVGS-------------LYGLPSMKRLDLSFNKLTTFKGDYFNTKSK 569 (719)
Q Consensus 507 ~l~~~~~~----~~~~l~~L~~L~Ls~n~i~~~~~~~-------------l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~ 569 (719)
.+...... .+..+++|++|++++|.++...... ....+.|+.+.+++|.++......+.. .+
T Consensus 104 ~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~-~l 182 (344)
T d2ca6a1 104 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK-TF 182 (344)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHH-HH
T ss_pred ccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccc-hh
Confidence 77654332 3345678888888888765421111 124556777777777665332221110 01
Q ss_pred CCCCCCcEEECcCCCCCCc-----CcCcccCCCCccEEEcCCCCCCCcC----hhhhcCCCCCCEEECCCCCCcccCccc
Q psy16110 570 PNTSSLEELNLNNNELTYL-----FPSSFTIHSKLKTLKLAFNKFNYFP----KELILGLSYLQEIDLSNNQLKTIDDYD 640 (719)
Q Consensus 570 ~~l~~L~~L~Ls~n~l~~~-----~~~~~~~l~~L~~L~L~~n~l~~~~----~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 640 (719)
..++.|++|++++|+++.. ....+..+++|++|++++|.++... ...+..++.|++|+|++|.+++.....
T Consensus 183 ~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~ 262 (344)
T d2ca6a1 183 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 262 (344)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred hhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHH
Confidence 1235677777777776542 2344556667777777777665321 233456667777777777665432111
Q ss_pred ----CC--CCCCCCEEeCCCCcCCCCCc----ccC-CCCCCCcEEECCCCcCCCc
Q psy16110 641 ----YG--YLPRLRKLNLNNNNIDAISE----TCF-FNSSQLQIINLSFNRLEKL 684 (719)
Q Consensus 641 ----l~--~l~~L~~L~Ls~N~l~~~~~----~~~-~~l~~L~~L~Ls~N~l~~i 684 (719)
+. ..+.|++|++++|+|+.... ..+ .++++|++|+|++|+++.-
T Consensus 263 l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~ 317 (344)
T d2ca6a1 263 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 317 (344)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCc
Confidence 11 23456677777776654211 112 1345666777777766543
No 31
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=1.1e-14 Score=145.86 Aligned_cols=39 Identities=26% Similarity=0.423 Sum_probs=15.3
Q ss_pred hcCCCCCCEEECCCC-CCcccCcccCCCCCCCCEEeCCCC
Q psy16110 617 ILGLSYLQEIDLSNN-QLKTIDDYDYGYLPRLRKLNLNNN 655 (719)
Q Consensus 617 l~~l~~L~~L~Ls~n-~l~~~~~~~l~~l~~L~~L~Ls~N 655 (719)
+..+++|++|++++| .+++.....+.++++|+.|+++++
T Consensus 196 l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 196 FFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp GGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred hcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 333444444444442 233222222334444444444443
No 32
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.43 E-value=1.6e-14 Score=149.16 Aligned_cols=191 Identities=18% Similarity=0.119 Sum_probs=114.9
Q ss_pred CCCccEEEcCCCCCCCCCc----hhhcCCCCccEEEccCCcCCCCChh-------------hhcCCCCCCEEeCCCCccc
Q psy16110 471 LKKLEVLDLAATGLKSIPQ----YQFDELLNLKYLCLAHNHLTEIPEM-------------MFKNLLNLTYLDLSNNNIV 533 (719)
Q Consensus 471 l~~L~~L~ls~n~l~~~~~----~~~~~~~~L~~L~L~~n~l~~~~~~-------------~~~~l~~L~~L~Ls~n~i~ 533 (719)
+++|+.|++++|.+..... ..+..+++|+.|++++|.+...... .....+.|+.+++++|.++
T Consensus 92 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~ 171 (344)
T d2ca6a1 92 CPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 171 (344)
T ss_dssp CTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CCCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeeccccccc
Confidence 4556666666665544322 1233456677777766655321100 1234567778888777765
Q ss_pred ccc----CCccCCCCCCCEEEccCCcCCcccCCcCCCCCCCCCCCCcEEECcCCCCCCc----CcCcccCCCCccEEEcC
Q psy16110 534 NLR----VGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYL----FPSSFTIHSKLKTLKLA 605 (719)
Q Consensus 534 ~~~----~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~ 605 (719)
... ...+..++.|++|++++|.+.......+-...+..+++|++|++++|.++.. +...+..+++|++|+++
T Consensus 172 ~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls 251 (344)
T d2ca6a1 172 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 251 (344)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred ccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhh
Confidence 422 2234456778888888887664211110011123357788888888887643 23456778889999999
Q ss_pred CCCCCCcChhh----hc--CCCCCCEEECCCCCCcccCc----ccC-CCCCCCCEEeCCCCcCCCCC
Q psy16110 606 FNKFNYFPKEL----IL--GLSYLQEIDLSNNQLKTIDD----YDY-GYLPRLRKLNLNNNNIDAIS 661 (719)
Q Consensus 606 ~n~l~~~~~~~----l~--~l~~L~~L~Ls~n~l~~~~~----~~l-~~l~~L~~L~Ls~N~l~~~~ 661 (719)
+|.++...... +. ..+.|++|++++|+++.... ..+ .+++.|++|++++|++....
T Consensus 252 ~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~~ 318 (344)
T d2ca6a1 252 DCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 318 (344)
T ss_dssp TCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred cCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCcc
Confidence 99887643322 22 24679999999998875221 122 25678999999999987643
No 33
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=7.1e-14 Score=139.78 Aligned_cols=59 Identities=15% Similarity=0.050 Sum_probs=31.2
Q ss_pred CCCcEEECcCC-CCCCcCcCcccCCCCccEEEcCCC-CCCCcChhhhcCCCCCCEEECCCC
Q psy16110 573 SSLEELNLNNN-ELTYLFPSSFTIHSKLKTLKLAFN-KFNYFPKELILGLSYLQEIDLSNN 631 (719)
Q Consensus 573 ~~L~~L~Ls~n-~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~l~~l~~L~~L~Ls~n 631 (719)
++|++|++++| .+++.....+..+++|++|++++| .++......+..+++|+.|+++++
T Consensus 175 ~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 175 PNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp TTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred ccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 45555555554 244444444555566666666654 344333334555666666666665
No 34
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=2.1e-12 Score=115.90 Aligned_cols=111 Identities=23% Similarity=0.320 Sum_probs=84.9
Q ss_pred CCccEEEcCCCCCCCcChhhhcCCCCCCEEECCCC-CCcccCcccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEE
Q psy16110 597 SKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNN-QLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIIN 675 (719)
Q Consensus 597 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n-~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 675 (719)
...+.++.+++.+..++.. +..+++|++|++++| .++.+++..|.++++|+.|++++|+|+.+.+..|..+++|++|+
T Consensus 8 ~~~~~l~c~~~~~~~~p~~-l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 86 (156)
T d2ifga3 8 HGSSGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLN 86 (156)
T ss_dssp SSSSCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEE
T ss_pred CCCCeEEecCCCCccCccc-ccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccccee
Confidence 3455677777777776654 667778888888665 47777777788888888888888888888777788888888888
Q ss_pred CCCCcCCCcChHhhcCcccc-EEecCCCceeeeccCCCccccC
Q psy16110 676 LSFNRLEKLPERLFNTFLYT-NYDMAPNLVFQSHLSGHRCECA 717 (719)
Q Consensus 676 Ls~N~l~~i~~~~~~~l~~L-~L~l~~N~l~~~~~~~~~C~c~ 717 (719)
|++|+|+.+|.++|... .| +|+|++||+ +|+|+
T Consensus 87 Ls~N~l~~l~~~~~~~~-~l~~L~L~~Np~--------~C~C~ 120 (156)
T d2ifga3 87 LSFNALESLSWKTVQGL-SLQELVLSGNPL--------HCSCA 120 (156)
T ss_dssp CCSSCCSCCCSTTTCSC-CCCEEECCSSCC--------CCCGG
T ss_pred ccCCCCcccChhhhccc-cccccccCCCcc--------cCCch
Confidence 88888888888777655 57 888888888 77775
No 35
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.26 E-value=1.7e-14 Score=135.64 Aligned_cols=131 Identities=24% Similarity=0.262 Sum_probs=64.4
Q ss_pred ccCCCCCCEEECcCCCCcccCcCccCCCccCcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCCCcccCCCccC
Q psy16110 214 FHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLE 293 (719)
Q Consensus 214 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 293 (719)
+..+++|++|+|++|+|+.++ .+.++++|++|++++|.++.++. ....+++|++|++++|.++.+. .+..+++|+
T Consensus 44 l~~L~~L~~L~Ls~n~I~~i~--~l~~l~~L~~L~Ls~N~i~~i~~-~~~~~~~L~~L~l~~N~i~~l~--~~~~l~~L~ 118 (198)
T d1m9la_ 44 LSTLKACKHLALSTNNIEKIS--SLSGMENLRILSLGRNLIKKIEN-LDAVADTLEELWISYNQIASLS--GIEKLVNLR 118 (198)
T ss_dssp HHHTTTCCEEECSEEEESCCC--CHHHHTTCCEEECCEEEECSCSS-HHHHHHHCCEEECSEEECCCHH--HHHHHHHSS
T ss_pred HhcccccceeECcccCCCCcc--cccCCccccChhhcccccccccc-cccccccccccccccccccccc--ccccccccc
Confidence 444445555555555554443 14445555555555555554443 2223344555555555555442 244555566
Q ss_pred EEEccCCCCcccCc-ccccCcccCcEEEcCCCCCCCcCCCcccc-----ccccCCCCCCEEe
Q psy16110 294 RIILRGNRLTTIEG-GAFNGLAKIHILNLGYNRLNKLNSDTFQG-----GAFNGLAKIHILN 349 (719)
Q Consensus 294 ~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-----~~l~~l~~L~~L~ 349 (719)
+|++++|+++.+.. ..+..+++|++|++++|++.......... ..+..+++|+.||
T Consensus 119 ~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 119 VLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp EEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred ccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 66666665554432 34555666666666666554433221110 0134566777765
No 36
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.21 E-value=3.1e-14 Score=133.80 Aligned_cols=128 Identities=29% Similarity=0.424 Sum_probs=69.2
Q ss_pred ccEEEcCCC--CccccCcccccchhccccEEEcCCCcCCCcCCCCCCcccccCCCCCCEEECcCCCCcccCcCccCCCcc
Q psy16110 166 IRRLDFSGN--ALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDN 243 (719)
Q Consensus 166 L~~L~Ls~n--~i~~l~~~~f~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 243 (719)
.+.+++++. .++.++..+ ..+++|++|+|++|.|+. + +.+.++++|++|+|++|+|+.++. .+..+++
T Consensus 25 ~~~~~l~~~~~~i~~l~~sl--~~L~~L~~L~Ls~n~I~~-----i--~~l~~l~~L~~L~Ls~N~i~~i~~-~~~~~~~ 94 (198)
T d1m9la_ 25 AEKVELHGMIPPIEKMDATL--STLKACKHLALSTNNIEK-----I--SSLSGMENLRILSLGRNLIKKIEN-LDAVADT 94 (198)
T ss_dssp CSCEECCBCCTTCCCCHHHH--HHTTTCCEEECSEEEESC-----C--CCHHHHTTCCEEECCEEEECSCSS-HHHHHHH
T ss_pred cceeeeecccCchhhhhhHH--hcccccceeECcccCCCC-----c--ccccCCccccChhhcccccccccc-ccccccc
Confidence 444555443 344444333 245566666666666553 1 135556666666666666655542 2333445
Q ss_pred CcEEECCCCcCCcCCCCCCCCCCCCcEEEcCCCcCcccCC-CcccCCCccCEEEccCCCCccc
Q psy16110 244 LLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKA-DSFLSQRWLERIILRGNRLTTI 305 (719)
Q Consensus 244 L~~L~L~~n~l~~i~~~~l~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~ 305 (719)
|++|++++|+++.++. +..+++|++|++++|.|+.+.. ..+..+++|++|++++|++...
T Consensus 95 L~~L~l~~N~i~~l~~--~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 155 (198)
T d1m9la_ 95 LEELWISYNQIASLSG--IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp CCEEECSEEECCCHHH--HHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHH
T ss_pred cccccccccccccccc--ccccccccccccccchhccccccccccCCCccceeecCCCccccC
Confidence 6666666666665542 4555666666666666655532 3455666666666666655433
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.38 E-value=1e-09 Score=98.75 Aligned_cols=39 Identities=26% Similarity=0.091 Sum_probs=15.4
Q ss_pred CCccCEEEccCCCCcccCcccccCcccCcEEEcCCCCCC
Q psy16110 289 QRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLN 327 (719)
Q Consensus 289 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 327 (719)
+++|+.|++++|.|+.+....+....+|++|++++|++.
T Consensus 90 l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~ 128 (162)
T d1koha1 90 APNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128 (162)
T ss_dssp STTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTS
T ss_pred CCcccccccccCccccchhhhhhhccccceeecCCCCcC
Confidence 344444444444444333322222233444444444443
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.30 E-value=1e-08 Score=91.97 Aligned_cols=64 Identities=30% Similarity=0.340 Sum_probs=28.7
Q ss_pred CCCCCCEEECCCCCCcccCc--ccCCCCCCCCEEeCCCCcCCCCCcccCCCCCCCcEEECCCCcCC
Q psy16110 619 GLSYLQEIDLSNNQLKTIDD--YDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLE 682 (719)
Q Consensus 619 ~l~~L~~L~Ls~n~l~~~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 682 (719)
.+++|++|++++|+|+.+.+ ..++.+++|+.|++++|+|+.+.+-.+.....|+.|++++|++.
T Consensus 63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~ 128 (162)
T d1koha1 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128 (162)
T ss_dssp HCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTS
T ss_pred hCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcC
Confidence 34445555555555544322 12334455555555555555443322222334555555555554
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.86 E-value=3e-06 Score=75.77 Aligned_cols=107 Identities=16% Similarity=0.152 Sum_probs=57.3
Q ss_pred CCCcEEECcCC-CCCCc----CcCcccCCCCccEEEcCCCCCCCc----ChhhhcCCCCCCEEECCCCCCcccC----cc
Q psy16110 573 SSLEELNLNNN-ELTYL----FPSSFTIHSKLKTLKLAFNKFNYF----PKELILGLSYLQEIDLSNNQLKTID----DY 639 (719)
Q Consensus 573 ~~L~~L~Ls~n-~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~~----~~ 639 (719)
+.|++|+|+++ .++.. +..++...+.|++|+|++|.+..- -.+++...+.|++|+|++|.++... ..
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~ 94 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 94 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHH
Confidence 55666666543 33322 122344556666666666665531 1233445566777777777666321 22
Q ss_pred cCCCCCCCCEEeCCCCcCCCCCc-------ccCCCCCCCcEEECCCC
Q psy16110 640 DYGYLPRLRKLNLNNNNIDAISE-------TCFFNSSQLQIINLSFN 679 (719)
Q Consensus 640 ~l~~l~~L~~L~Ls~N~l~~~~~-------~~~~~l~~L~~L~Ls~N 679 (719)
.+...+.|++|++++|++..+.. ..+...++|+.|+++.+
T Consensus 95 aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 95 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred HHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCC
Confidence 35556667777777666554422 22334567777777655
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.77 E-value=1.1e-05 Score=71.91 Aligned_cols=111 Identities=12% Similarity=0.046 Sum_probs=82.7
Q ss_pred cCCCCccEEEcCCC-CCCCc----ChhhhcCCCCCCEEECCCCCCcccCc----ccCCCCCCCCEEeCCCCcCCCCC---
Q psy16110 594 TIHSKLKTLKLAFN-KFNYF----PKELILGLSYLQEIDLSNNQLKTIDD----YDYGYLPRLRKLNLNNNNIDAIS--- 661 (719)
Q Consensus 594 ~~l~~L~~L~L~~n-~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~~~----~~l~~l~~L~~L~Ls~N~l~~~~--- 661 (719)
...++|++|+|+++ .++.- -..++...+.|++|+|++|.+..... ..+...+.|++|+|++|+++...
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 45689999999975 46532 12356778999999999999984322 23455689999999999998642
Q ss_pred -cccCCCCCCCcEEECCCCcCCCcCh-------HhhcCcccc-EEecCCCce
Q psy16110 662 -ETCFFNSSQLQIINLSFNRLEKLPE-------RLFNTFLYT-NYDMAPNLV 704 (719)
Q Consensus 662 -~~~~~~l~~L~~L~Ls~N~l~~i~~-------~~~~~l~~L-~L~l~~N~l 704 (719)
...+...++|++|++++|++..+.. .++...+.| .++++.+..
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCc
Confidence 3357788999999999998776542 345567889 999987754
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.12 E-value=5.2e-05 Score=67.33 Aligned_cols=109 Identities=15% Similarity=0.163 Sum_probs=56.7
Q ss_pred CCCcEEECcC-CCCCCc----CcCcccCCCCccEEEcCCCCCCCcC----hhhhcCCCCCCEEECCCCCCcccC----cc
Q psy16110 573 SSLEELNLNN-NELTYL----FPSSFTIHSKLKTLKLAFNKFNYFP----KELILGLSYLQEIDLSNNQLKTID----DY 639 (719)
Q Consensus 573 ~~L~~L~Ls~-n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~----~~~l~~l~~L~~L~Ls~n~l~~~~----~~ 639 (719)
+.|++|++++ +.++.. +..++...++|++|++++|.++... ...+...++++.+++++|.++... ..
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~ 96 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 96 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH
Confidence 4555555554 234322 1223445566666666666655422 123445567777777777665321 12
Q ss_pred cCCCCCCCCEEeC--CCCcCCCC----CcccCCCCCCCcEEECCCCcC
Q psy16110 640 DYGYLPRLRKLNL--NNNNIDAI----SETCFFNSSQLQIINLSFNRL 681 (719)
Q Consensus 640 ~l~~l~~L~~L~L--s~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l 681 (719)
.+...++|+.++| ++|++... ....+...++|+.|+++.+..
T Consensus 97 ~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 97 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 3455666765444 34555432 222344567777777766543
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.88 E-value=8.9e-05 Score=65.76 Aligned_cols=93 Identities=11% Similarity=0.117 Sum_probs=38.3
Q ss_pred CCCccCEEEccCCCCcccCc----ccccCcccCcEEEcCCCCCCCcCCCccccccccCCCCCCEEeCC--CCCCCccccc
Q psy16110 288 SQRWLERIILRGNRLTTIEG----GAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLG--YNRLNKLNSD 361 (719)
Q Consensus 288 ~l~~L~~L~Ls~n~i~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~L~--~n~l~~i~~~ 361 (719)
..++|++|++++|.++.... ..+...++++.+++++|.++......+.. .+...++|+.++|+ +|.+.....
T Consensus 44 ~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~-~l~~~~~L~~l~L~l~~n~i~~~~~- 121 (166)
T d1io0a_ 44 TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE-ALQSNTSLIELRIDNQSQPLGNNVE- 121 (166)
T ss_dssp TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH-GGGGCSSCCEEECCCCSSCCCHHHH-
T ss_pred cCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH-HHHhCccccEEeeccCCCcCcHHHH-
Confidence 34445555555554432221 12233445555555555544332222211 23444555544332 333322111
Q ss_pred cccCcccccccccccCCCccEEECCCC
Q psy16110 362 TFQGTHITIFSFFQDFQKLKSLDLNGN 388 (719)
Q Consensus 362 ~f~~~~~~~~~~l~~~~~L~~L~L~~n 388 (719)
..+...+...++|++|+++.+
T Consensus 122 ------~~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 122 ------MEIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp ------HHHHHHHHHCSSCCEEECCCS
T ss_pred ------HHHHHHHHhCCCcCEEeCcCC
Confidence 112233445556666665544
Done!