RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16110
(719 letters)
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Length = 305
Score = 99.3 bits (246), Expect = 2e-23
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 21/269 (7%)
Query: 425 LTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGL 484
LDL +N + E++ F N+ L L L N +S + G F PL KLE L L+ L
Sbjct: 33 TALLDLQNNKITEIKDGDFKNLKNLHTLILINN-KISKISPGAFAPLVKLERLYLSKNQL 91
Query: 485 KSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRV--GSLYG 542
K +P+ L+ L + N +T++ + +F L + ++L N + + + G+ G
Sbjct: 92 KELPEKMPK---TLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQG 148
Query: 543 LPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTL 602
+ + + ++ +TT SL EL+L+ N++T + +S + L L
Sbjct: 149 MKKLSYIRIADTNITTIPQGLP--------PSLTELHLDGNKITKVDAASLKGLNNLAKL 200
Query: 603 KLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISE 662
L+FN + + +L+E+ L+NN+L ++ + L+NNNI AI
Sbjct: 201 GLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGS 259
Query: 663 TCFF------NSSQLQIINLSFNRLEKLP 685
F + ++L N ++
Sbjct: 260 NDFCPPGYNTKKASYSGVSLFSNPVQYWE 288
Score = 92.0 bits (227), Expect = 5e-21
Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 14/265 (5%)
Query: 425 LTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGL 484
L + S L+++ + L+L N ++ + G F LK L L L +
Sbjct: 12 LRVVQCSDLGLEKVPKDLPPD---TALLDLQNN-KITEIKDGDFKNLKNLHTLILINNKI 67
Query: 485 KSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLP 544
I F L+ L+ L L+ N L E+PE M K L L + N I +R GL
Sbjct: 68 SKISPGAFAPLVKLERLYLSKNQLKELPEKMPK---TLQELRVHENEITKVRKSVFNGLN 124
Query: 545 SMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKL 604
M ++L N L + + L + + + +T + L L L
Sbjct: 125 QMIVVELGTNPLKSSG---IENGAFQGMKKLSYIRIADTNITTIPQGLP---PSLTELHL 178
Query: 605 AFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETC 664
NK + GL+ L ++ LS N + +D+ P LR+L+LNNN +
Sbjct: 179 DGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGG 237
Query: 665 FFNSSQLQIINLSFNRLEKLPERLF 689
+ +Q++ L N + + F
Sbjct: 238 LADHKYIQVVYLHNNNISAIGSNDF 262
Score = 86.6 bits (213), Expect = 3e-19
Identities = 62/317 (19%), Positives = 116/317 (36%), Gaps = 30/317 (9%)
Query: 243 NLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRL 302
+L ++ +P + P +L + N+I +K F + + L +IL N++
Sbjct: 11 HLRVVQCSDLGLEKVPK---DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKI 67
Query: 303 TTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDT 362
+ I GAF L K+ L L N+L +L + + L + N + K+
Sbjct: 68 SKISPGAFAPLVKLERLYLSKNQLKELPEKMPK--------TLQELRVHENEITKVRKSV 119
Query: 363 FQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSALNY 422
F G + I S NG F L + + D ITT+
Sbjct: 120 FNGLNQMIVVELGTNPLKSSGIENGAFQGM-------KKLSYIRIADTNITTIPQGLP-- 170
Query: 423 KLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAAT 482
LT+L L N + +++ + + L L LS +S++ G L L L
Sbjct: 171 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLS-FNSISAVDNGSLANTPHLRELHLNNN 229
Query: 483 GLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFK------NLLNLTYLDLSNNNIVNLR 536
L +P D ++ + L +N+++ I F + + + L +N +
Sbjct: 230 KLVKVPGGLAD-HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWE 288
Query: 537 V--GSLYGLPSMKRLDL 551
+ + + + L
Sbjct: 289 IQPSTFRCVYVRAAVQL 305
Score = 77.0 bits (188), Expect = 6e-16
Identities = 57/300 (19%), Positives = 108/300 (36%), Gaps = 64/300 (21%)
Query: 396 TGLEDTLDNLNVRDNQITTLSSSAL-NYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNL 454
L L++++N+IT + N K L L L +N + ++ P AF + L L L
Sbjct: 27 KDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 86
Query: 455 SRNA--------------------HLSSLPVGGFDPLKKLEVLDLAATGLKSIPQY--QF 492
S+N ++ + F+ L ++ V++L LKS F
Sbjct: 87 SKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF 146
Query: 493 DELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLS 552
+ L Y+ +A ++T IP+ + +L T L L N I + SL GL ++ +L LS
Sbjct: 147 QGMKKLSYIRIADTNITTIPQGLPPSL---TELHLDGNKITKVDAASLKGLNNLAKLGLS 203
Query: 553 FNKLTTFKGD------------------YFNTKSKPNTSSLEELNLNNNELTYLFPSSFT 594
FN ++ + ++ + L+NN ++ + + F
Sbjct: 204 FNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDF- 262
Query: 595 IHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKT--IDDYDYGYLPRLRKLNL 652
P + + L +N ++ I + + + L
Sbjct: 263 -----------------CPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
Score = 75.8 bits (185), Expect = 1e-15
Identities = 51/280 (18%), Positives = 106/280 (37%), Gaps = 25/280 (8%)
Query: 219 NLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRI 278
+ +LDL +N+I I++G K NL L + +N+ + I + L L ++ N++
Sbjct: 32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 91
Query: 279 GTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGA 338
L + + L N +T + FNGL ++ ++ LG N L + GA
Sbjct: 92 KELPEKMPKTLQELRV---HENEITKVRKSVFNGLNQMIVVELGTNPLKSSG---IENGA 145
Query: 339 FNGLAKIHILNLGYNRLNKLNSDTFQG----------THITIFSFFQDFQKLKSLDLNGN 388
F G+ K+ + + + + + + L L L+ N
Sbjct: 146 FQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFN 205
Query: 389 FL--INLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAF--- 443
+ ++ S L L++ +N++ + ++K + + L +NN+ + F
Sbjct: 206 SISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPP 265
Query: 444 ---TNVPTLLHLNLSRNA-HLSSLPVGGFDPLKKLEVLDL 479
T + ++L N + F + + L
Sbjct: 266 GYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
Score = 66.6 bits (161), Expect = 2e-12
Identities = 40/214 (18%), Positives = 77/214 (35%), Gaps = 16/214 (7%)
Query: 505 HNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYF 564
L ++P+ + + LDL NN I ++ G L ++ L L NK++ F
Sbjct: 19 DLGLEKVPKDLPPDT---ALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAF 75
Query: 565 NTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQ 624
LE L L+ N+L L +L+ N+ K + GL+ +
Sbjct: 76 A-----PLVKLERLYLSKNQLKELPEKMPKTLQELRVH---ENEITKVRKSVFNGLNQMI 127
Query: 625 EIDLSNNQLKTIDDYD--YGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLE 682
++L N LK+ + + + +L + + + NI I + L ++L N++
Sbjct: 128 VVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP---PSLTELHLDGNKIT 184
Query: 683 KLPERLFNTFLYTNYDMAPNLVFQSHLSGHRCEC 716
K+ + +G
Sbjct: 185 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 218
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes
[TaxId: 1639]}
Length = 384
Score = 85.4 bits (210), Expect = 2e-18
Identities = 75/388 (19%), Positives = 139/388 (35%), Gaps = 29/388 (7%)
Query: 196 LADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFT 255
+ L ++ S ++ L + L IK+I+ ++ +NL ++ +N+ T
Sbjct: 25 MKTVLGKTNVTDTVSQTD---LDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLT 79
Query: 256 SIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAK 315
I L L + M N+I + + L+ + N
Sbjct: 80 DITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRL 137
Query: 316 IHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQ 375
N + + Q +F L L ++ S
Sbjct: 138 ELSSNTISDISALSGLTSLQQLSFGNQVTDLK---PLANLTTLERLDISSNKVSDISVLA 194
Query: 376 DFQKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNL 435
L+SL N + ++ G+ LD L++ NQ+ + + A + LT LDL++N +
Sbjct: 195 KLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLA-SLTNLTDLDLANNQI 253
Query: 436 KELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDEL 495
L P + + L L L N + P+ G L LE+ + L
Sbjct: 254 SNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLEL-----NENQLEDISPISNL 306
Query: 496 LNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNK 555
NL YL L N++++I +L L L +NN + ++ SL L ++ L N+
Sbjct: 307 KNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDVS--SLANLTNINWLSAGHNQ 362
Query: 556 LTTFKGDYFNTKSKPNTSSLEELNLNNN 583
++ N + + +L LN+
Sbjct: 363 ISDL-------TPLANLTRITQLGLNDQ 383
Score = 80.8 bits (198), Expect = 7e-17
Identities = 74/366 (20%), Positives = 130/366 (35%), Gaps = 26/366 (7%)
Query: 189 DTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELR 248
D + L+ I S L NL ++ S+NQ+ I LK L+++
Sbjct: 44 DQVTTLQADRL-------GIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDIL 94
Query: 249 MDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGG 308
M++N+ I + + D + L R+ L N ++ I
Sbjct: 95 MNNNQIADIT----PLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISAL 150
Query: 309 AFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHI 368
+ + L L + T K+ ++ +L L S I
Sbjct: 151 SGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDIS-VLAKLTNLESLIATNNQI 209
Query: 369 TIFSFFQDFQKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLTKL 428
+ + L L LNGN L ++ + L +L++ +NQI+ L+ + LT+L
Sbjct: 210 SDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLS-GLTKLTEL 268
Query: 429 DLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIP 488
L N + + P + L L + LK L L L + I
Sbjct: 269 KLGANQISNISP-----LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDIS 323
Query: 489 QYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKR 548
L L+ L A+N ++++ NL N+ +L +N I +L L L + +
Sbjct: 324 P--VSSLTKLQRLFFANNKVSDVSS--LANLTNINWLSAGHNQISDLT--PLANLTRITQ 377
Query: 549 LDLSFN 554
L L+
Sbjct: 378 LGLNDQ 383
Score = 70.4 bits (171), Expect = 2e-13
Identities = 70/388 (18%), Positives = 125/388 (32%), Gaps = 50/388 (12%)
Query: 268 LRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLN 327
+ L I ++ +L+ L +I N+LT I L K+ + + N++
Sbjct: 46 VTTLQADRLGIKSIDGVEYLNN--LTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIA 101
Query: 328 KLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNG 387
+ + + N N + + + TI L+
Sbjct: 102 DITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSF 161
Query: 388 NFLINLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVP 447
+ T + + S L L ++N + ++ P
Sbjct: 162 GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILT-- 219
Query: 448 TLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNH 507
L+ L L LK I L NL L LA+N
Sbjct: 220 -------------------------NLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQ 252
Query: 508 LTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTK 567
++ + L LT L L N I N+ L GL ++ L+L+ N+L
Sbjct: 253 ISNLAP--LSGLTKLTELKLGANQISNI--SPLAGLTALTNLELNENQLEDISPISNLKN 308
Query: 568 SKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEID 627
L L L N ++ + P + +KL+ L A NK + + L+ + +
Sbjct: 309 -------LTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDVSS--LANLTNINWLS 357
Query: 628 LSNNQLKTIDDYDYGYLPRLRKLNLNNN 655
+NQ+ + L R+ +L LN+
Sbjct: 358 AGHNQISDLTPL--ANLTRITQLGLNDQ 383
Score = 67.3 bits (163), Expect = 2e-12
Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 19/198 (9%)
Query: 489 QYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKR 548
+L NL+ L +N +++I + NL L L+ N + ++ G+L L ++
Sbjct: 190 ISVLAKLTNLESLIATNNQISDITPLGILT--NLDELSLNGNQLKDI--GTLASLTNLTD 245
Query: 549 LDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNK 608
LDL+ N+++ + L EL L N+++ + P + L +
Sbjct: 246 LDLANNQISNLA-------PLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLE 298
Query: 609 FNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNS 668
L L + L N + I L +L++L NN + +S N
Sbjct: 299 DISPISNLK----NLTYLTLYFNNISDISPV--SSLTKLQRLFFANNKVSDVSS--LANL 350
Query: 669 SQLQIINLSFNRLEKLPE 686
+ + ++ N++ L
Sbjct: 351 TNINWLSAGHNQISDLTP 368
Score = 40.4 bits (93), Expect = 6e-04
Identities = 45/272 (16%), Positives = 84/272 (30%), Gaps = 17/272 (6%)
Query: 421 NYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLA 480
K L N+ + ++ + L R + S+ G + L L ++ +
Sbjct: 20 ALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRL-GIKSID--GVEYLNNLTQINFS 74
Query: 481 ATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSL 540
L I L L + + +N + +I + L L + ++
Sbjct: 75 NNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLT 132
Query: 541 YGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLK 600
+ + S N + + N L L SS +
Sbjct: 133 NLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV 192
Query: 601 TLKLAFNKFNYFPKELILGL------SYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNN 654
KL + I + + L E+ L+ NQLK I L L L+L N
Sbjct: 193 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLAN 250
Query: 655 NNIDAISETCFFNSSQLQIINLSFNRLEKLPE 686
N I ++ ++L + L N++ +
Sbjct: 251 NQISNLAP--LSGLTKLTELKLGANQISNISP 280
Score = 36.9 bits (84), Expect = 0.008
Identities = 42/259 (16%), Positives = 85/259 (32%), Gaps = 40/259 (15%)
Query: 493 DELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLS 552
+L + L + I + L NLT ++ SNN + ++ L L + + ++
Sbjct: 41 TDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMN 96
Query: 553 FNKLTTFKGDYFNTK---------------SKPNTSSLEELNLNNNELTYLFPSSFTIHS 597
N++ T N ++L L L++N ++ + S
Sbjct: 97 NNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSL 156
Query: 598 KLKTLKLAFNKFNYFPK-----------------ELILGLSYLQEIDLSNNQLKTIDDYD 640
+ + ++ L+ L+ + +NNQ+ I
Sbjct: 157 QQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLG 216
Query: 641 YGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERLFNTFLYTNYDMA 700
L +L+LN N + I + + L ++L+ N++ L T L A
Sbjct: 217 IL--TNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGA 272
Query: 701 PNLVFQSHLSGHRCECAQY 719
+ S L+G
Sbjct: 273 NQISNISPLAGLTALTNLE 291
Score = 32.3 bits (72), Expect = 0.23
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 9/74 (12%)
Query: 517 KNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLE 576
L L N+ + S L + L + + G ++L
Sbjct: 19 TALAEKMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGIKSIDGV-------EYLNNLT 69
Query: 577 ELNLNNNELTYLFP 590
++N +NN+LT + P
Sbjct: 70 QINFSNNQLTDITP 83
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 70.2 bits (170), Expect = 9e-14
Identities = 55/270 (20%), Positives = 87/270 (32%), Gaps = 12/270 (4%)
Query: 426 TKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLK 485
L+ + + L N +S +P F + L +L L + L
Sbjct: 14 VTTSCPQQGLQAVPVGIPAA---SQRIFLHGN-RISHVPAASFRACRNLTILWLHSNVLA 69
Query: 486 S-IPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLP 544
L + + L + F L L L L + L G GL
Sbjct: 70 RIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLA 129
Query: 545 SMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKL 604
+++ L L N L D F + +L L L+ N ++ + +F L L L
Sbjct: 130 ALQYLYLQDNALQALPDDTFR-----DLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 184
Query: 605 AFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETC 664
N+ + L L + L N L + L L+ L LN+N
Sbjct: 185 HQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR 244
Query: 665 FFNSSQLQIINLSFNRLE-KLPERLFNTFL 693
+ LQ S + + LP+RL L
Sbjct: 245 PL-WAWLQKFRGSSSEVPCSLPQRLAGRDL 273
Score = 59.8 bits (143), Expect = 2e-10
Identities = 36/195 (18%), Positives = 63/195 (32%), Gaps = 7/195 (3%)
Query: 505 HNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYF 564
L +P + + L N I ++ S ++ +
Sbjct: 20 QQGLQAVPVGIPAAS---QRIFLHGNRISHVPAASFRACRNLTI----LWLHSNVLARID 72
Query: 565 NTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQ 624
+ +N +L + P++F +L TL L L GL+ LQ
Sbjct: 73 AAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQ 132
Query: 625 EIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKL 684
+ L +N L+ + D + L L L L+ N I ++ E F L + L NR+ +
Sbjct: 133 YLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192
Query: 685 PERLFNTFLYTNYDM 699
F
Sbjct: 193 HPHAFRDLGRLMTLY 207
Score = 59.1 bits (141), Expect = 4e-10
Identities = 48/278 (17%), Positives = 91/278 (32%), Gaps = 26/278 (9%)
Query: 162 SDIP--IRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVN 219
IP +R+ GN + + F + L + + L+
Sbjct: 28 VGIPAASQRIFLHGNRISHVPAASFR----ACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 220 LRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIG 279
L + Q+++++ G L L +D + G AL+ L + N +
Sbjct: 84 QLDLS-DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 280 TLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAF 339
L D+F L + L GNR++++ AF GL + L L NR+ ++ F+
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR---- 198
Query: 340 NGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGN-FLINLESTGL 398
+ L+ L LN N ++ + + L
Sbjct: 199 ------------DLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPL 246
Query: 399 EDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLK 436
L +++ L + L L+ N+L+
Sbjct: 247 WAWLQKFRGSSSEVPCSLPQRLAGRDL--KRLAANDLQ 282
Score = 57.1 bits (136), Expect = 2e-09
Identities = 54/257 (21%), Positives = 101/257 (39%), Gaps = 13/257 (5%)
Query: 380 LKSLDLNGNFLINLESTGLED----TLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNL 435
+ + L+GN + ++ + T+ L+ ++ L + L
Sbjct: 34 SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93
Query: 436 KELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDEL 495
+ ++P F + L L+L R L G F L L+ L L L+++P F +L
Sbjct: 94 RSVDPATFHGLGRLHTLHLDRCGL-QELGPGLFRGLAALQYLYLQDNALQALPDDTFRDL 152
Query: 496 LNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNK 555
NL +L L N ++ +PE F+ L +L L L N + ++ + L + L L N
Sbjct: 153 GNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212
Query: 556 LTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFN-YFPK 614
L+ + +L+ L LN+N + + + L+ + + ++ P+
Sbjct: 213 LSALPTEALA-----PLRALQYLRLNDNPWVCD-CRARPLWAWLQKFRGSSSEVPCSLPQ 266
Query: 615 ELI-LGLSYLQEIDLSN 630
L L L DL
Sbjct: 267 RLAGRDLKRLAANDLQG 283
Score = 29.8 bits (65), Expect = 1.3
Identities = 12/92 (13%), Positives = 24/92 (26%), Gaps = 3/92 (3%)
Query: 625 EIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKL 684
L+ + G +++ L+ N I + F L I+ L N L ++
Sbjct: 15 TTSCPQQGLQAVPV---GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARI 71
Query: 685 PERLFNTFLYTNYDMAPNLVFQSHLSGHRCEC 716
F + +
Sbjct: 72 DAAAFTGLALLEQLDLSDNAQLRSVDPATFHG 103
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of
glycoprotein Ib alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 266
Score = 64.0 bits (154), Expect = 9e-12
Identities = 43/218 (19%), Positives = 72/218 (33%), Gaps = 12/218 (5%)
Query: 464 PVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLT 523
P+ + ++ L ++P D + L L+ N L LT
Sbjct: 2 PICEVSKVASHLEVNCDKRNLTALPP---DLPKDTTILHLSENLLYTFSLATLMPYTRLT 58
Query: 524 YLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNN 583
L+L + L L + + +L L+++ N
Sbjct: 59 QLNLDRAEL--------TKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFN 110
Query: 584 ELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGY 643
LT L + +L+ L L N+ P L+ L+++ L+NN L +
Sbjct: 111 RLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNG 170
Query: 644 LPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRL 681
L L L L N++ I + FF S L L N
Sbjct: 171 LENLDTLLLQENSLYTIPKG-FFGSHLLPFAFLHGNPW 207
Score = 55.5 bits (132), Expect = 6e-09
Identities = 48/199 (24%), Positives = 63/199 (31%), Gaps = 28/199 (14%)
Query: 405 LNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLP 464
+N +T L K T L LS N L L LNL R
Sbjct: 15 VNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV 72
Query: 465 VGGFDPLKKLEVLDLAAT--------------------GLKSIPQYQFDELLNLKYLCLA 504
G L L++ L S+P L L+ L L
Sbjct: 73 DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 505 HNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYF 564
N L +P + L L L+NNN+ L G L GL ++ L L N L T +F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFF 192
Query: 565 NTKSKPNTSSLEELNLNNN 583
+ L L+ N
Sbjct: 193 GSH------LLPFAFLHGN 205
Score = 54.0 bits (128), Expect = 2e-08
Identities = 43/203 (21%), Positives = 73/203 (35%), Gaps = 11/203 (5%)
Query: 488 PQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMK 547
P + ++ + + +LT +P + K+ T L LS N + + +L +
Sbjct: 2 PICEVSKVASHLEVNCDKRNLTALPPDLPKDT---TILHLSENLLYTFSLATLMPYTRLT 58
Query: 548 RLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFN 607
+L+L +LT + D S +L L + S + L
Sbjct: 59 QLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLG 118
Query: 608 KFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFN 667
LQE+ L N+LKT+ P+L KL+L NNN+ +
Sbjct: 119 ALRGLG--------ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNG 170
Query: 668 SSQLQIINLSFNRLEKLPERLFN 690
L + L N L +P+ F
Sbjct: 171 LENLDTLLLQENSLYTIPKGFFG 193
Score = 50.1 bits (118), Expect = 3e-07
Identities = 32/202 (15%), Positives = 62/202 (30%), Gaps = 10/202 (4%)
Query: 241 CDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGN 300
+ LE+ D T++P + P+ IL ++ N + T + + L ++ L
Sbjct: 9 VASHLEVNCDKRNLTALPP---DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 301 RLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNS 360
LT ++ + L+ + L T ++ + +L L L
Sbjct: 66 ELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGE 125
Query: 361 DTFQGTHITIFSFFQD-------FQKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQIT 413
+ SL N + + LD L +++N +
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185
Query: 414 TLSSSALNYKLLTKLDLSHNNL 435
T+ LL L N
Sbjct: 186 TIPKGFFGSHLLPFAFLHGNPW 207
Score = 38.9 bits (89), Expect = 0.001
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Query: 620 LSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFN 679
++ E++ L + L+L+ N + S ++L +NL
Sbjct: 9 VASHLEVNCDKRNLTALPP---DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 680 RLEKLPERLFNTFLYTNY 697
L KL L T
Sbjct: 66 ELTKLQVDGTLPVLGTLD 83
Score = 37.0 bits (84), Expect = 0.005
Identities = 47/197 (23%), Positives = 66/197 (33%), Gaps = 17/197 (8%)
Query: 162 SDIP--IRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVN 219
D+P L S N L S P+ L +L L + L
Sbjct: 27 PDLPKDTTILHLSENLLYTFSLATLMPYT-RLTQLNL-------DRAELTKLQVDGTLPV 78
Query: 220 LRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIG 279
L LD + + + L L + NR TS+P +L G L+ L + N +
Sbjct: 79 LGTLD-LSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137
Query: 280 TLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAF 339
TL LE++ L N LT + G NGL + L L N L + F
Sbjct: 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFF----- 192
Query: 340 NGLAKIHILNLGYNRLN 356
G + L N
Sbjct: 193 -GSHLLPFAFLHGNPWL 208
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia
pestis [TaxId: 632]}
Length = 353
Score = 58.7 bits (140), Expect = 1e-09
Identities = 48/318 (15%), Positives = 87/318 (27%), Gaps = 18/318 (5%)
Query: 219 NLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRI 278
L+L++ + ++ E +L L N T +P + P++L+ L + N +
Sbjct: 39 QAHELELNNLGLSSLPELP----PHLESLVASCNSLTELPEL----PQSLKSLLVDNNNL 90
Query: 279 GTLKA-DSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGG 337
L L + L + L + L
Sbjct: 91 KALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNN 150
Query: 338 AFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTG 397
L ++ L NS + L L +
Sbjct: 151 QLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIY 210
Query: 398 LEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRN 457
++ L + NY ++ F+ + L N
Sbjct: 211 ADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLN 270
Query: 458 AHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFK 517
S+ D LE L+++ L +P L+ L + NHL E+PE+
Sbjct: 271 -ASSNEIRSLCDLPPSLEELNVSNNKLIELP----ALPPRLERLIASFNHLAEVPEL--- 322
Query: 518 NLLNLTYLDLSNNNIVNL 535
NL L + N +
Sbjct: 323 -PQNLKQLHVEYNPLREF 339
Score = 54.1 bits (128), Expect = 3e-08
Identities = 53/313 (16%), Positives = 107/313 (34%), Gaps = 15/313 (4%)
Query: 379 KLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKEL 438
+ L+LN L +L L L++L N +T L + K L + + L +L
Sbjct: 39 QAHELELNNLGLSSLPE--LPPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKALSDL 96
Query: 439 EPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATG-----LKSIPQYQFD 493
P + L SS L+ L + +
Sbjct: 97 PPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELP 156
Query: 494 ELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSF 553
EL NL +L + + ++ L + + +N + +L L ++ +
Sbjct: 157 ELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLL 216
Query: 554 NKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFP 613
L + N + + + + F+ S+L N +
Sbjct: 217 KTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEI 276
Query: 614 KELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQI 673
+ L L+E+++SNN+L + PRL +L + N++ + E L+
Sbjct: 277 RSLCDLPPSLEELNVSNNKLIELPAL----PPRLERLIASFNHLAEVPELP----QNLKQ 328
Query: 674 INLSFNRLEKLPE 686
+++ +N L + P+
Sbjct: 329 LHVEYNPLREFPD 341
Score = 51.4 bits (121), Expect = 2e-07
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 573 SSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQ 632
SLEELN++NN+L L P+ +L+ L +FN P+ L+++ + N
Sbjct: 284 PSLEELNVSNNKLIEL-PALP---PRLERLIASFNHLAEVPEL----PQNLKQLHVEYNP 335
Query: 633 LKTIDDYDYGYLPRLRKLNLNN 654
L+ D + L +N+
Sbjct: 336 LREFPD----IPESVEDLRMNS 353
Score = 51.4 bits (121), Expect = 2e-07
Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 17/103 (16%)
Query: 502 CLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKG 561
N + + +L L++SNN ++ L P ++RL SFN L
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELP----ALPPRLERLIASFNHLAEV-- 319
Query: 562 DYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKL 604
+L++L++ N L P ++ L++
Sbjct: 320 -------PELPQNLKQLHVEYNPLREF-PDIP---ESVEDLRM 351
Score = 49.8 bits (117), Expect = 5e-07
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 13/100 (13%)
Query: 430 LSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQ 489
N + P+L LN+S N L LP +LE L + L +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNN-KLIELPAL----PPRLERLIASFNHLAEVP- 320
Query: 490 YQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSN 529
+ NLK L + +N L E P++ ++ L +++
Sbjct: 321 ---ELPQNLKQLHVEYNPLREFPDI----PESVEDLRMNS 353
Score = 47.1 bits (110), Expect = 4e-06
Identities = 48/301 (15%), Positives = 89/301 (29%), Gaps = 19/301 (6%)
Query: 398 LEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRN 457
L+ L + + +++L + L L S N+L EL P + L L + N
Sbjct: 36 LDRQAHELELNNLGLSSLPELPPH---LESLVASCNSLTEL-PELPQS---LKSLLVDNN 88
Query: 458 AHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFK 517
+ + + L + ++ L + + +
Sbjct: 89 NLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAG 148
Query: 518 NLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEE 577
N +L N + L + L LS + N L
Sbjct: 149 NNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTT 208
Query: 578 LNLNNNELTYLFPSSFTIHSKLKTLKLAFNKF--------NYFPKELILGLSYLQEIDLS 629
+ +NN L L ++ + + + + GLS L
Sbjct: 209 IYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYY 268
Query: 630 NNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERLF 689
N P L +LN++NN + + +L+ + SFN L ++PE
Sbjct: 269 LNASSNEIRSLCDLPPSLEELNVSNNKLIELPALP----PRLERLIASFNHLAEVPELPQ 324
Query: 690 N 690
N
Sbjct: 325 N 325
Score = 42.9 bits (99), Expect = 9e-05
Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 8/68 (11%)
Query: 214 FHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSM 273
+L L++S+N++ + L L N +P + P+ L+ L +
Sbjct: 280 CDLPPSLEELNVSNNKLIELPALP----PRLERLIASFNHLAEVPEL----PQNLKQLHV 331
Query: 274 AYNRIGTL 281
YN +
Sbjct: 332 EYNPLREF 339
Score = 41.3 bits (95), Expect = 3e-04
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 12/79 (15%)
Query: 401 TLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHL 460
+L+ LNV +N++ L + L +L S N+L E+ L L++ N L
Sbjct: 285 SLEELNVSNNKLIELPALPPR---LERLIASFNHLAEVPEL----PQNLKQLHVEYN-PL 336
Query: 461 SSLPVGGFDPLKKLEVLDL 479
P D + +E L +
Sbjct: 337 REFP----DIPESVEDLRM 351
Score = 39.8 bits (91), Expect = 8e-04
Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 8/94 (8%)
Query: 623 LQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLE 682
E++L+N L ++ + P L L + N++ + E L+ + + N L+
Sbjct: 40 AHELELNNLGLSSLPEL----PPHLESLVASCNSLTELPELP----QSLKSLLVDNNNLK 91
Query: 683 KLPERLFNTFLYTNYDMAPNLVFQSHLSGHRCEC 716
L + + + + S
Sbjct: 92 ALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKII 125
Score = 38.3 bits (87), Expect = 0.003
Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 13/71 (18%)
Query: 190 TLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRM 249
+L+EL +++N L L S N + + E NL +L +
Sbjct: 285 SLEELNVSNNKL---------IELPALPPRLERLIASFNHLAEVPELP----QNLKQLHV 331
Query: 250 DHNRFTSIPSV 260
++N P +
Sbjct: 332 EYNPLREFPDI 342
Score = 34.4 bits (77), Expect = 0.046
Identities = 23/225 (10%), Positives = 58/225 (25%), Gaps = 21/225 (9%)
Query: 26 CDTMIDDFPYPCRCKKMSESQLAMDCDNVAFPNGEYPTLPYGLNLVTFSQRWVGHQILPM 85
+ + + + + ++ G N++ L
Sbjct: 149 NNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTT 208
Query: 86 QIFSSSVSSEPCDTMIDDFPYPCRCKKMSESQLAMDCDNVAFPNGEYPTLPYGLNLVTFS 145
+++ D R +++ + + L +
Sbjct: 209 IYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYY 268
Query: 146 QRWVGHQILPMQIFSSSDIPIRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSL 205
++I + S + L+ S N L L L+ L + N
Sbjct: 269 LNASSNEIRSLCDLPPS---LEELNVSNNKLIELPALPPR-----LERLIASFNHL---- 316
Query: 206 NPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMD 250
NL+ L + N ++ + +++ +LRM+
Sbjct: 317 -----AEVPELPQNLKQLHVEYNPLREFPDIP----ESVEDLRMN 352
Score = 31.7 bits (70), Expect = 0.28
Identities = 17/109 (15%), Positives = 33/109 (30%), Gaps = 20/109 (18%)
Query: 323 YNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKS 382
N S + + LN+ N+L +L + +L+
Sbjct: 264 PNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL---------------PPRLER 308
Query: 383 LDLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLS 431
L + N L + L L L+V N + + + L ++
Sbjct: 309 LIASFNHLAEVPE--LPQNLKQLHVEYNPLREFPDIPES---VEDLRMN 352
Score = 30.9 bits (68), Expect = 0.52
Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 26/119 (21%)
Query: 289 QRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHIL 348
L + N + + + LN+ N+L +L + ++ L
Sbjct: 259 LSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPA---------LPPRLERL 309
Query: 349 NLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDTLDNLNV 407
+N L ++ Q LK L + N L + +++++L +
Sbjct: 310 IASFNHLAEVPE---------------LPQNLKQLHVEYNPLREFPD--IPESVEDLRM 351
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 56.5 bits (134), Expect = 2e-09
Identities = 29/230 (12%), Positives = 65/230 (28%), Gaps = 5/230 (2%)
Query: 426 TKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLK 485
+ + E+ N + L L + G F LE ++++ +
Sbjct: 11 RVFLCQESKVTEIPSDLPRN---AIELRFVLT-KLRVIQKGAFSGFGDLEKIEISQNDVL 66
Query: 486 SIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPS 545
+ + L + + + + NL L + ++
Sbjct: 67 EVIEADVFSNLPKLHEIRIEKA-NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIH 125
Query: 546 MKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLA 605
+ L + + L LN N + + +F +
Sbjct: 126 SLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSD 185
Query: 606 FNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNN 655
N P ++ G S +D+S ++ ++ Y L +LR + N
Sbjct: 186 NNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL 235
Score = 50.3 bits (118), Expect = 3e-07
Identities = 38/233 (16%), Positives = 69/233 (29%), Gaps = 28/233 (12%)
Query: 476 VLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIV-- 533
V + + IP D N L L I + F +L +++S N+++
Sbjct: 12 VFLCQESKVTEIPS---DLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEV 68
Query: 534 ---------------------NLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNT 572
NL + ++ L T K K
Sbjct: 69 IEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQ 128
Query: 573 SSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQ 632
L ++ N N T S + + L L N G + NN
Sbjct: 129 KVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNN 188
Query: 633 LKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLP 685
L+ + + + L+++ I ++ N +L+ + L+KLP
Sbjct: 189 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKLP 239
Score = 43.7 bits (101), Expect = 3e-05
Identities = 27/208 (12%), Positives = 63/208 (30%), Gaps = 26/208 (12%)
Query: 505 HNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYF 564
+ +TEIP + +N L + ++ G+ G ++++++S N +
Sbjct: 17 ESKVTEIPSDLPRNA---IELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADV 73
Query: 565 NTKSKPNTSSLEELNLNNNELTYLFPSSFTI-----------------------HSKLKT 601
+ E N + + L
Sbjct: 74 FSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLD 133
Query: 602 LKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAIS 661
++ N + + L+ N ++ I + + +NNN++ +
Sbjct: 134 IQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELP 193
Query: 662 ETCFFNSSQLQIINLSFNRLEKLPERLF 689
F +S I+++S R+ LP
Sbjct: 194 NDVFHGASGPVILDISRTRIHSLPSYGL 221
Score = 42.6 bits (98), Expect = 7e-05
Identities = 33/247 (13%), Positives = 69/247 (27%), Gaps = 17/247 (6%)
Query: 219 NLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRI 278
+ R+ ++++ I + + N +ELR + I + +G L + ++ N +
Sbjct: 9 SNRVFLCQESKVTEIPSDLPR---NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 65
Query: 279 GTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGA 338
+E + N N G
Sbjct: 66 ----------LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGI 115
Query: 339 FNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGL 398
+ I +L L+ ++ F + L+ NG I+ +
Sbjct: 116 KHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNG 175
Query: 399 EDTLDNLNVRDNQITTLSSSAL-NYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRN 457
+ +N + L + LD+S + L N+ L +
Sbjct: 176 TQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY-- 233
Query: 458 AHLSSLP 464
+L LP
Sbjct: 234 -NLKKLP 239
Score = 41.4 bits (95), Expect = 2e-04
Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Query: 214 FHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSV 260
FHG ILD+S +I ++ L+ L +P++
Sbjct: 197 FHGASGPVILDISRTRIHSLPSYGLENLKKLRAR--STYNLKKLPTL 241
Score = 40.7 bits (93), Expect = 3e-04
Identities = 34/223 (15%), Positives = 75/223 (33%), Gaps = 12/223 (5%)
Query: 292 LERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLG 351
+ +L I+ GAF+G + + + N + ++ ++ L
Sbjct: 31 AIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVF---------SNLPKLH 81
Query: 352 YNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQ 411
R+ K N+ + + + + + ++ + + LD + +
Sbjct: 82 EIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH 141
Query: 412 ITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPL 471
+S L L+ N ++E+ AF N LP F
Sbjct: 142 TIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNL-EELPNDVFHGA 200
Query: 472 KKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEM 514
+LD++ T + S+P Y + L L+ +L ++P +
Sbjct: 201 SGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKLPTL 241
Score = 39.1 bits (89), Expect = 0.001
Identities = 28/236 (11%), Positives = 67/236 (28%), Gaps = 13/236 (5%)
Query: 295 IILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNR 354
+ + +++T I + L +L + GAF+G + + + N
Sbjct: 13 FLCQESKVTEIPSDLPRNAIE---LRFVLTKLRVIQK-----GAFSGFGDLEKIEISQND 64
Query: 355 LNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITT 414
+ ++ + + F L + + +
Sbjct: 65 VLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKI 124
Query: 415 LSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKL 474
S + + +++ +F +V L+ N + H F+ +
Sbjct: 125 HSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIH-----NCAFNGTQLD 179
Query: 475 EVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNN 530
E+ L+ +P F L ++ + +P +NL L N
Sbjct: 180 ELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL 235
Score = 34.5 bits (77), Expect = 0.034
Identities = 34/223 (15%), Positives = 67/223 (30%), Gaps = 13/223 (5%)
Query: 219 NLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRI 278
N L +++ I++G G +L ++ + N + +
Sbjct: 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 89
Query: 279 GTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGA 338
L + Q L + T I+ L + N +
Sbjct: 90 NLLYINPEAFQNLPNLQYLLISN-TGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSF 148
Query: 339 FNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGL 398
+ IL L N + ++++ F GT + + + + + +
Sbjct: 149 VGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVI--- 205
Query: 399 EDTLDNLNVRDNQITTLSSSALNYKLLTKLD-LSHNNLKELEP 440
L++ +I +L S L L KL S NLK+L
Sbjct: 206 ------LDISRTRIHSLPSYGLEN--LKKLRARSTYNLKKLPT 240
Score = 29.5 bits (64), Expect = 1.2
Identities = 41/226 (18%), Positives = 71/226 (31%), Gaps = 11/226 (4%)
Query: 162 SDIP--IRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVN 219
SD+P L F LR + FS +L + D L I + +
Sbjct: 25 SDLPRNAIELRFVLTKLRVIQKGAFS----GFGDLEKIEISQNDVLEVIEADVFSNLPKL 80
Query: 220 LRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIG 279
I N + I + NL L + + +P V +L + N
Sbjct: 81 HEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINI 140
Query: 280 TLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAF 339
+ E +IL L + A N + N + F
Sbjct: 141 HTIERNSFVGLSFESVILW---LNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVF 197
Query: 340 NGLAKIHILNLGYNRLNKLNSDTFQG-THITIFSFFQDFQKLKSLD 384
+G + IL++ R++ L S + + S + +KL +L+
Sbjct: 198 HGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN-LKKLPTLE 242
Score = 28.0 bits (60), Expect = 4.4
Identities = 6/72 (8%), Positives = 14/72 (19%), Gaps = 3/72 (4%)
Query: 648 RKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERLFNTFLYTNYDMAPNLVFQS 707
R + + I N + +L + + F+ F
Sbjct: 11 RVFLCQESKVTEIPSDLPRN---AIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE 67
Query: 708 HLSGHRCECAQY 719
+
Sbjct: 68 VIEADVFSNLPK 79
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo
sapiens) [TaxId: 9606]}
Length = 162
Score = 47.9 bits (113), Expect = 6e-07
Identities = 29/161 (18%), Positives = 58/161 (36%), Gaps = 9/161 (5%)
Query: 429 DLSHNNLKELEPTAFTNV-PTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSI 487
+L +++L+ + L+L L VL+ ++ ++
Sbjct: 3 ELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLV-----AQNIDVVLNRRSSMAATL 57
Query: 488 PQYQFDELLNLKYLCLAHNHLTEIPE--MMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPS 545
+ + L L L++N L + + + + NL L+LS N + + R
Sbjct: 58 RII-EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLK 116
Query: 546 MKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELT 586
++ L L N L+ D S + L L+ +EL
Sbjct: 117 LEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLDGHELP 157
Score = 37.1 bits (85), Expect = 0.002
Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 7/119 (5%)
Query: 574 SLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQL 633
S + L+L + L + + + + L ++LSNN+L
Sbjct: 23 SQQALDLKGLR----SDPDLVAQNIDVVLNR-RSSMAATLRIIEENIPELLSLNLSNNRL 77
Query: 634 KTIDDYDY--GYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERLFN 690
+DD P L+ LNL+ N + + E +L+ + L N L
Sbjct: 78 YRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136
Score = 35.2 bits (80), Expect = 0.010
Identities = 21/115 (18%), Positives = 45/115 (39%), Gaps = 3/115 (2%)
Query: 204 SLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVS-- 261
L + S + +L+ + + I + LL L + +NR + +S
Sbjct: 28 DLKGLRSDPDLVAQNIDVVLNRRSSMAATLR-IIEENIPELLSLNLSNNRLYRLDDMSSI 86
Query: 262 LNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKI 316
+ L+IL+++ N + + + + LE + L GN L+ ++ I
Sbjct: 87 VQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAI 141
Score = 34.4 bits (78), Expect = 0.021
Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 5/120 (4%)
Query: 217 LVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYN 276
+ L +++ + L + + L + ++ + N P L L+++ N
Sbjct: 19 RYDGSQQALDLKGLRSDPD--LVAQNIDVVLNRRSSMAATLRIIEENIPE-LLSLNLSNN 75
Query: 277 RIGTLKADSFLSQRW--LERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTF 334
R+ L S + Q+ L+ + L GN L + K+ L L N L+ D
Sbjct: 76 RLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQS 135
Score = 33.3 bits (75), Expect = 0.044
Identities = 37/183 (20%), Positives = 64/183 (34%), Gaps = 36/183 (19%)
Query: 503 LAHNHLTEIPEMMFKN-LLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKG 561
L + ++ +M K + LDL L L+ + T +
Sbjct: 4 LKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDP----DLVAQNIDVVLNRRSSMAATLRI 59
Query: 562 DYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLS 621
+ N L LNL+NN L L S +
Sbjct: 60 ------IEENIPELLSLNLSNNRLYRLDDMSSIVQ----------------------KAP 91
Query: 622 YLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLSFNRL 681
L+ ++LS N+LK+ + D +L +L L+ N+ +S+T S+ + I F +L
Sbjct: 92 NLKILNLSGNELKSERELDKIKGLKLEELWLDGNS---LSDTFRDQSTYISAIRERFPKL 148
Query: 682 EKL 684
+L
Sbjct: 149 LRL 151
Score = 30.6 bits (68), Expect = 0.39
Identities = 27/143 (18%), Positives = 44/143 (30%), Gaps = 12/143 (8%)
Query: 342 LAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDT 401
++K + + L L SD + +L + + L +
Sbjct: 16 MSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELL------S 69
Query: 402 LDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLS 461
L+ N R ++ +SS L L+LS N LK L L L N+
Sbjct: 70 LNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSD 129
Query: 462 SLPVGG------FDPLKKLEVLD 478
+ + KL LD
Sbjct: 130 TFRDQSTYISAIRERFPKLLRLD 152
Score = 29.8 bits (66), Expect = 0.59
Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 15/163 (9%)
Query: 224 DLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKA 283
+L Q++ ++ + K + + +D S P L +L+ + TL+
Sbjct: 3 ELKPEQVEQLKLIMSKRY-DGSQQALDLKGLRSDPD--LVAQNIDVVLNRRSSMAATLR- 58
Query: 284 DSFLSQRWLERIILRGNRLTTIEG--GAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNG 341
+ L + L NRL ++ + ILNL N L +
Sbjct: 59 IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-----RELDKIK 113
Query: 342 LAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLD 384
K+ L L N L+ D I + + F KL LD
Sbjct: 114 GLKLEELWLDGNSLSDTFRDQSTY----ISAIRERFPKLLRLD 152
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 460
Score = 49.2 bits (115), Expect = 1e-06
Identities = 21/102 (20%), Positives = 36/102 (35%), Gaps = 7/102 (6%)
Query: 520 LNLTYLDLSNNNIVNLRVGSLY-GLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEEL 578
L++ LD+ + + R L L + + L LT + + + +L EL
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDI-SSALRVNPALAEL 60
Query: 579 NLNNNELT-----YLFPSSFTIHSKLKTLKLAFNKFNYFPKE 615
NL +NEL + T K++ L L
Sbjct: 61 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 102
Score = 48.8 bits (114), Expect = 1e-06
Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
Query: 496 LNLKYLCLAHNHLTEIPEM-MFKNLLNLTYLDLSNNNIVNLRVGS----LYGLPSMKRLD 550
L+++ L + L++ + L + L + + R L P++ L+
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 551 LSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNN 583
L N+L + + +++L+L N
Sbjct: 62 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
Score = 46.9 bits (109), Expect = 7e-06
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 510 EIPEMMFKNLLNLTYLDLSNNNIVNLRVGS----LYGLPSMKRLDLSFNKLTTFKGDYFN 565
E+ + + + L L L++ ++ + S L S++ LDLS N L
Sbjct: 359 ELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLV 418
Query: 566 TKSKPNTSSLEELNLNNNELTYLFPSSFT 594
+ LE+L L + +
Sbjct: 419 ESVRQPGCLLEQLVLYDIYWSEEMEDRLQ 447
Score = 40.3 bits (92), Expect = 8e-04
Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 10/89 (11%)
Query: 599 LKTLKLAFNKFNYFP-KELILGLSYLQEIDLSNNQLKTIDDYDYG----YLPRLRKLNLN 653
+++L + + + EL+ L Q + L + L D P L +LNL
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 654 NNNID-----AISETCFFNSSQLQIINLS 677
+N + + + S ++Q ++L
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQ 92
Score = 40.0 bits (91), Expect = 0.001
Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 12/104 (11%)
Query: 538 GSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELT-----YLFPSS 592
G ++ L L+ ++ + SL EL+L+NN L L S
Sbjct: 363 GLGQPGSVLRVLWLADCDVSDSSCSSL-AATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 593 FTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTI 636
L+ L L ++ ++ LQ ++ L+ I
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDR------LQALEKDKPSLRVI 459
Score = 39.6 bits (90), Expect = 0.001
Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 20/115 (17%)
Query: 483 GLKSIPQYQFDELLNLKYLCLAHNHLTEIPEM----MFKNLLNLTYLDLSNNNIVNLRVG 538
G++ + Q L+ L LA +++ +L LDLSNN + + +
Sbjct: 356 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 415
Query: 539 SL-----YGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYL 588
L +++L L S+ L+ L + L +
Sbjct: 416 QLVESVRQPGCLLEQLVLYDIYW-----------SEEMEDRLQALEKDKPSLRVI 459
Score = 39.6 bits (90), Expect = 0.001
Identities = 16/89 (17%), Positives = 29/89 (32%), Gaps = 13/89 (14%)
Query: 380 LKSLDLNGNFLINLESTGLEDTLDN---LNVRDNQITTLSSSAL-----NYKLLTKLDLS 431
++SLD+ L + L L + + D +T + L +L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 432 HNNL-----KELEPTAFTNVPTLLHLNLS 455
N L + T + L+L
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQ 92
Score = 38.8 bits (88), Expect = 0.002
Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 164 IPIRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRIL 223
+ I+ LD L P Q +RL D ++ S++ L L
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSA-LRVNPALAEL 60
Query: 224 DLSDNQI-----KAIEEGILKGCDNLLELRMDHNRF 254
+L N++ + +G+ + +L + +
Sbjct: 61 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
Score = 38.4 bits (87), Expect = 0.003
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Query: 190 TLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQI-----KAIEEGILKGCDNL 244
L+ L LAD DS + + +LR LDLS+N + + E + + L
Sbjct: 370 VLRVLWLADCDVSDSSCSSLAAT-LLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 245 LELRMDHNRFTSIPSVSLNGPRA----LRILS 272
+L + ++ L LR++S
Sbjct: 429 EQLVLYDIYWSEEMEDRLQALEKDKPSLRVIS 460
Score = 38.0 bits (86), Expect = 0.003
Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 9/85 (10%)
Query: 621 SYLQEIDLSNNQLKTIDDYDYG----YLPRLRKLNLNNNNID-----AISETCFFNSSQL 671
S L+ + L++ + LR+L+L+NN + + E+ L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 672 QIINLSFNRLEKLPERLFNTFLYTN 696
+ + L + E
Sbjct: 429 EQLVLYDIYWSEEMEDRLQALEKDK 453
Score = 38.0 bits (86), Expect = 0.004
Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 5/64 (7%)
Query: 623 LQEIDLSNNQLKTIDDYDY-GYLPRLRKLNLNNNNIDAISET----CFFNSSQLQIINLS 677
+Q +D+ +L + L + + + L++ + + L +NL
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 678 FNRL 681
N L
Sbjct: 64 SNEL 67
Score = 37.6 bits (85), Expect = 0.005
Identities = 15/113 (13%), Positives = 25/113 (22%), Gaps = 27/113 (23%)
Query: 425 LTKLDLSHNNLKELEPTA-FTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATG 483
+ LD+ L + + + L L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDC--------------------GLTEAR 43
Query: 484 LKSIPQYQFDELLNLKYLCLAHNHLTE-----IPEMMFKNLLNLTYLDLSNNN 531
K I L L L N L + + + + + L L N
Sbjct: 44 CKDISSA-LRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
Score = 34.6 bits (77), Expect = 0.045
Identities = 17/112 (15%), Positives = 29/112 (25%), Gaps = 19/112 (16%)
Query: 364 QGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLED------TLDNLNVRDNQITTLSS 417
G Q L+ L L + + + L +L L++ +N +
Sbjct: 355 AGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGI 414
Query: 418 SAL------NYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSL 463
L LL +L L E + L L +
Sbjct: 415 LQLVESVRQPGCLLEQLVLYDIYWSE-------EMEDRLQALEKDKPSLRVI 459
Score = 34.6 bits (77), Expect = 0.046
Identities = 21/147 (14%), Positives = 37/147 (25%), Gaps = 3/147 (2%)
Query: 96 PCDTMIDDFPYPCRCKKMSESQLAMDCDNVAFPNGEYPTLPYGLNLVTFSQRWVGHQILP 155
P +S F + ++ ++
Sbjct: 301 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 360
Query: 156 MQIFSSSDIPIRRLDFSGNALRRLSDKLFS---PHRDTLQELRLADNLFGDSLNPIFSTS 212
Q +R L + + S + +L+EL L++N GD+ S
Sbjct: 361 CQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVES 420
Query: 213 EFHGLVNLRILDLSDNQIKAIEEGILK 239
L L L D E L+
Sbjct: 421 VRQPGCLLEQLVLYDIYWSEEMEDRLQ 447
Score = 30.7 bits (67), Expect = 0.68
Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
Query: 268 LRILSMAYNRIGTLKADSFLSQ-RWLERIILRGNRLTTIE----GGAFNGLAKIHILNLG 322
++ L + + + L + + + L LT A + LNL
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 323 YNRLNKLNSDTFQGGAFNGLAKIHILNL 350
N L + G KI L+L
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSL 91
Score = 30.3 bits (66), Expect = 0.79
Identities = 21/101 (20%), Positives = 31/101 (30%), Gaps = 14/101 (13%)
Query: 316 IHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQ 375
I L++ L SD L + ++ L L + I S +
Sbjct: 4 IQSLDIQCEEL----SDARWAELLPLLQQCQVVRLDDCGLTEARC-------KDISSALR 52
Query: 376 DFQKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLS 416
L L+L N L G+ L L +I LS
Sbjct: 53 VNPALAELNLRSN---ELGDVGVHCVLQGLQTPSCKIQKLS 90
Score = 28.8 bits (62), Expect = 2.5
Identities = 11/96 (11%), Positives = 21/96 (21%), Gaps = 9/96 (9%)
Query: 286 FLSQRWLERIILRGNRLTTIE----GGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNG 341
L + L ++ + L+L N L
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 424
Query: 342 LAKIHILNLGYNRLNKLNSDTFQG-----THITIFS 372
+ L L ++ D Q + + S
Sbjct: 425 GCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVIS 460
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes
[TaxId: 1639]}
Length = 227
Score = 46.9 bits (110), Expect = 2e-06
Identities = 34/216 (15%), Positives = 64/216 (29%), Gaps = 17/216 (7%)
Query: 471 LKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNN 530
L + + + +L + L +T I + L NL L+L +N
Sbjct: 18 LANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKDN 73
Query: 531 NI---------VNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLN 581
I + L G P ++ + + +
Sbjct: 74 QITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 133
Query: 582 NNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDY 641
+ + L+ + LS L + +N++ I
Sbjct: 134 LYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPL-- 191
Query: 642 GYLPRLRKLNLNNNNIDAISETCFFNSSQLQIINLS 677
LP L +++L NN I +S N+S L I+ L+
Sbjct: 192 ASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
Score = 43.9 bits (102), Expect = 3e-05
Identities = 34/212 (16%), Positives = 64/212 (30%), Gaps = 18/212 (8%)
Query: 355 LNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITT 414
L +++T D + +L G + +E + L L ++DNQIT
Sbjct: 18 LANAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD 77
Query: 415 LSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKL 474
L+ K+ + ++ TL + + L
Sbjct: 78 LAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLD 137
Query: 475 EVLDLAATGLKSIPQYQ--------------FDELLNLKYLCLAHNHLTEIPEMMFKNLL 520
+ L + Q L L L N +++I +L
Sbjct: 138 LNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLP 195
Query: 521 NLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLS 552
NL + L NN I ++ L ++ + L+
Sbjct: 196 NLIEVHLKNNQISDV--SPLANTSNLFIVTLT 225
Score = 40.8 bits (94), Expect = 3e-04
Identities = 39/219 (17%), Positives = 66/219 (30%), Gaps = 18/219 (8%)
Query: 445 NVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLA 504
+ + + ++ ++ L + L TG+ +I Q+ L NL L L
Sbjct: 17 ALANAIKIAAGKSNVTDTVT---QADLDGITTLSAFGTGVTTIEGVQY--LNNLIGLELK 71
Query: 505 HNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKR---------LDLSFNK 555
N +T++ + + L + V+ G L N
Sbjct: 72 DNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNL 131
Query: 556 LTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKE 615
+ T P L+ + SKL TLK NK +
Sbjct: 132 QVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP- 190
Query: 616 LILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNN 654
+ L L E+ L NNQ+ + L + L N
Sbjct: 191 -LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTN 226
Score = 37.3 bits (85), Expect = 0.003
Identities = 38/229 (16%), Positives = 71/229 (31%), Gaps = 25/229 (10%)
Query: 369 TIFSFFQD--FQKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLT 426
I F D + + + + + D + L+ +TT+ L
Sbjct: 8 AINVIFPDPALANAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQ-YLNNLI 66
Query: 427 KLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKS 486
L+L N + +L P T L L+ + ++S++ L + +
Sbjct: 67 GLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLA 126
Query: 487 IPQYQFDELLNLKYLCLAHNHLTEIPEM-------------MFKNLLNLTYLDLSNNNIV 533
L+L + NL LT L +N I
Sbjct: 127 GLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKIS 186
Query: 534 NLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNN 582
++ L LP++ + L N+++ NTS+L + L N
Sbjct: 187 DIS--PLASLPNLIEVHLKNNQISDVSPL-------ANTSNLFIVTLTN 226
Score = 37.3 bits (85), Expect = 0.004
Identities = 23/193 (11%), Positives = 52/193 (26%), Gaps = 6/193 (3%)
Query: 217 LVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYN 276
L + L + IE ++ +NL+ L + N+ T + + LS
Sbjct: 40 LDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPL 97
Query: 277 RIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQG 336
+ + A + + L + L L + +
Sbjct: 98 KNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLS 157
Query: 337 GAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLEST 396
++ + L L + I+ S L + L N + ++
Sbjct: 158 IGNAQVSDLTPLANLSK----LTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSPL 213
Query: 397 GLEDTLDNLNVRD 409
L + + +
Sbjct: 214 ANTSNLFIVTLTN 226
Score = 32.7 bits (73), Expect = 0.12
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 206 NPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDH 251
N I S L NL + L +NQI + L NL + + +
Sbjct: 183 NKISDISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 162
Score = 44.2 bits (103), Expect = 1e-05
Identities = 21/140 (15%), Positives = 43/140 (30%), Gaps = 6/140 (4%)
Query: 491 QFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLD 550
Q+ + + L L + I + L +D S+N I L L +K L
Sbjct: 13 QYTNAVRDRELDLRGYKIPVIENL-GATLDQFDAIDFSDNEIRKLDGFP--LLRRLKTLL 69
Query: 551 LSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLK-LAFNKF 609
++ N++ L +L L L P + +
Sbjct: 70 VNNNRICRIGEGLDQALPDLTELILTNNSLVE--LGDLDPLASLKSLTYLCILRNPVTNK 127
Query: 610 NYFPKELILGLSYLQEIDLS 629
++ +I + ++ +D
Sbjct: 128 KHYRLYVIYKVPQVRVLDFQ 147
Score = 42.2 bits (98), Expect = 5e-05
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 3/123 (2%)
Query: 591 SSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKL 650
+ +T + + L L K L L ID S+N+++ +D + L RL+ L
Sbjct: 12 AQYTNAVRDRELDLRGYKIPVIE-NLGATLDQFDAIDFSDNEIRKLD--GFPLLRRLKTL 68
Query: 651 NLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERLFNTFLYTNYDMAPNLVFQSHLS 710
+NNN I I E L + L+ N L +L + L + + ++
Sbjct: 69 LVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKK 128
Query: 711 GHR 713
+R
Sbjct: 129 HYR 131
Score = 40.3 bits (93), Expect = 2e-04
Identities = 19/148 (12%), Positives = 38/148 (25%), Gaps = 7/148 (4%)
Query: 385 LNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFT 444
L + L++R +I + + +D S N +++L+ F
Sbjct: 3 LTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDG--FP 60
Query: 445 NVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLA 504
+ L L ++ N L L L L + L
Sbjct: 61 LLRRLKTLLVNNNRICRIGEGLDQAL-PDLTELILTNNSLVELGDLDPLASLKSLTYLCI 119
Query: 505 HNH----LTEIPEMMFKNLLNLTYLDLS 528
+ + + + LD
Sbjct: 120 LRNPVTNKKHYRLYVIYKVPQVRVLDFQ 147
Score = 36.5 bits (83), Expect = 0.004
Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 3/109 (2%)
Query: 204 SLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLN 263
+ I +++ V R LDL +I I E + D + N +
Sbjct: 4 TAELIEQAAQYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKLDGFP-- 60
Query: 264 GPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNG 312
R L+ L + NRI + + L +IL N L +
Sbjct: 61 LLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLA 109
Score = 34.1 bits (77), Expect = 0.027
Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 14/155 (9%)
Query: 527 LSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELT 586
L+ I + LDL K+ + + ++ ++NE+
Sbjct: 3 LTAELIEQA--AQYTNAVRDRELDLRGYKIPVIENLGATLD------QFDAIDFSDNEIR 54
Query: 587 YLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYD-YGYLP 645
L +LKTL + N+ + L L L E+ L+NN L + D D L
Sbjct: 55 KLDGFPL--LRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLK 112
Query: 646 RLRKLNLNNNNIDAIS---ETCFFNSSQLQIINLS 677
L L + N + + Q+++++
Sbjct: 113 SLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQ 147
Score = 28.8 bits (63), Expect = 1.6
Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 16/144 (11%)
Query: 339 FNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGL 398
+ + L+L ++ + + + ++D + N + L+ L
Sbjct: 14 YTNAVRDRELDLRGYKIPVIE------------NLGATLDQFDAIDFSDNEIRKLDGFPL 61
Query: 399 EDTLDNLNV-RDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRN 457
L L V + LT+L L++N+L EL L
Sbjct: 62 LRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILR 121
Query: 458 AHLSSLP---VGGFDPLKKLEVLD 478
+++ + + ++ VLD
Sbjct: 122 NPVTNKKHYRLYVIYKVPQVRVLD 145
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase
alpha-subunit, C-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 43.2 bits (101), Expect = 1e-05
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 11/112 (9%)
Query: 499 KYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTT 558
+ L LAH LT + + LL +T+LDLS+N + +L L ++ L S N L
Sbjct: 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALEN 57
Query: 559 FKGDYFNTKSKPNTSSLEELNLNNNELTYL-FPSSFTIHSKLKTLKLAFNKF 609
G + + EL L NN L +L L L N
Sbjct: 58 VDGVANLPRLQ-------ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 102
Score = 42.8 bits (100), Expect = 2e-05
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 221 RILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGT 280
R+L L+ + + L+ + L + HNR ++P +L R L +L + N +
Sbjct: 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALEN 57
Query: 281 LKADSFLSQRWLERIILRGNRLTTIEG-GAFNGLAKIHILNLGYNRLNKL 329
+ D + L+ ++L NRL ++ +LNL N L +
Sbjct: 58 V--DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
Score = 40.5 bits (94), Expect = 1e-04
Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 204 SLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLN 263
+ + L+ + LDLS N+++A+ + L L+ N ++ V+
Sbjct: 6 AHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPAL-AALRCLEVLQASDNALENVDGVANL 64
Query: 264 GPRALRILSMAYNRIGTLKADSFLSQ-RWLERIILRGNRLTTIEG 307
+ L + NR+ A L L + L+GN L EG
Sbjct: 65 PRL--QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 107
Score = 39.7 bits (92), Expect = 2e-04
Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 5/124 (4%)
Query: 381 KSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEP 440
+ L L L L + +L++ N++ L + + L L S N L+ ++
Sbjct: 1 RVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG 60
Query: 441 TAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAA---TGLKSIPQYQFDELLN 497
A L L N S + +L +L+L + I + + L +
Sbjct: 61 VANLPRLQ--ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 118
Query: 498 LKYL 501
+ +
Sbjct: 119 VSSI 122
Score = 38.2 bits (88), Expect = 6e-04
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 578 LNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTID 637
L+L + +LT L + L L+ N+ P L L L+ + S+N L+ +D
Sbjct: 3 LHLAHKDLTVL--CHLEQLLLVTHLDLSHNRLRALPPALA-ALRCLEVLQASDNALENVD 59
Query: 638 DYDYGYLPRLRKLNLNNNNIDAISE-TCFFNSSQLQIINLSFNRLEKLPE 686
+ +L L NN + + + +L ++NL N L +
Sbjct: 60 GVANLPRLQ--ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 107
Score = 32.4 bits (73), Expect = 0.060
Identities = 25/127 (19%), Positives = 40/127 (31%), Gaps = 20/127 (15%)
Query: 269 RILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNK 328
R+L +A+ + L L + + L NRL + L + +L N L
Sbjct: 1 RVLHLAHKDLTVLCHLEQLLL--VTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALEN 57
Query: 329 LNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGN 388
++ ++ L L NRL +L L+L GN
Sbjct: 58 VDGVANLP-------RLQELLLCNNRL----------QQSAAIQPLVSCPRLVLLNLQGN 100
Query: 389 FLINLES 395
L E
Sbjct: 101 SLCQEEG 107
Score = 29.3 bits (65), Expect = 0.61
Identities = 19/113 (16%), Positives = 34/113 (30%), Gaps = 20/113 (17%)
Query: 318 ILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRL----------NKLNSDTFQGTH 367
+L+L + L L L + L+L +NRL L
Sbjct: 2 VLHLAHKDLTVLCH-------LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNA 54
Query: 368 ITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDTLDNL---NVRDNQITTLSS 417
+ + +L+ L L N L + + L N++ N +
Sbjct: 55 LENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 107
Score = 28.5 bits (63), Expect = 1.4
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 648 RKLNLNNNNIDAISETCFFNSSQLQIINLSFNRLEKLPERLFNTFLYTNYDM 699
R L+L + ++ + + ++LS NRL LP L
Sbjct: 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQA 50
Score = 26.2 bits (57), Expect = 7.1
Identities = 7/37 (18%), Positives = 12/37 (32%)
Query: 199 NLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEE 235
L + L + L +L+L N + E
Sbjct: 71 LLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 107
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 313
Score = 45.5 bits (106), Expect = 1e-05
Identities = 47/261 (18%), Positives = 83/261 (31%), Gaps = 13/261 (4%)
Query: 425 LTKLDLSHNNLKELE--PTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAAT 482
+ LDLS NL + P++ N+P L L + +L L +L L + T
Sbjct: 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT 111
Query: 483 GLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIV-NLRVGSLY 541
+ ++ L L ++N L+ +L NL + N I +
Sbjct: 112 NVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171
Query: 542 GLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKT 601
+ +S N+LT F + + + S K
Sbjct: 172 FSKLFTSMTISRNRLTGKIPPTFANLNLAF-------VDLSRNMLEGDASVLFGSDKNTQ 224
Query: 602 LKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNI-DAI 660
F + L +DL NN++ L L LN++ NN+ I
Sbjct: 225 KIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284
Query: 661 SETCFFNSSQLQIINLSFNRL 681
+ N + + + N+
Sbjct: 285 PQ--GGNLQRFDVSAYANNKC 303
Score = 38.2 bits (87), Expect = 0.002
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 421 NYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLA 480
K L LDL +N + P T + L LN+S N +P GG L++ +V A
Sbjct: 242 LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG--NLQRFDVSAYA 299
Score = 36.7 bits (83), Expect = 0.008
Identities = 47/263 (17%), Positives = 78/263 (29%), Gaps = 16/263 (6%)
Query: 216 GLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDH----NRFTSIPSVSLNGPRALRIL 271
+ LDLS + I NL L + N ++ L L
Sbjct: 48 QTYRVNNLDLSGLNLPKPYP-IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 272 SMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKL-- 329
+ + + D + L + N L+ + + L + + NR++
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 330 -------NSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKS 382
T + N L L ++ F D K
Sbjct: 167 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKI 226
Query: 383 LDLNGNFLINLESTGLEDTLDNLNVRDNQIT-TLSSSALNYKLLTKLDLSHNNLKELEPT 441
+ +L GL L+ L++R+N+I TL K L L++S NNL P
Sbjct: 227 HLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Query: 442 AFTNVPTLLHLNLSRNAHLSSLP 464
N+ + N L P
Sbjct: 287 -GGNLQRFDVSAYANNKCLCGSP 308
Score = 30.9 bits (68), Expect = 0.46
Identities = 26/141 (18%), Positives = 44/141 (31%), Gaps = 6/141 (4%)
Query: 518 NLLNLTYLDLSNNNIVNLRV--GSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSL 575
+ LDLS N+ SL LP + L + + + L
Sbjct: 48 QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLV----GPIPPAIAKLTQL 103
Query: 576 EELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKT 635
L + + ++ P + L TL ++N + I L L I N++
Sbjct: 104 HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG 163
Query: 636 IDDYDYGYLPRLRKLNLNNNN 656
YG +L + N
Sbjct: 164 AIPDSYGSFSKLFTSMTISRN 184
Score = 28.2 bits (61), Expect = 3.8
Identities = 44/255 (17%), Positives = 72/255 (28%), Gaps = 13/255 (5%)
Query: 191 LQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDN-QIKAIEEGILKGCDNLLELRM 249
+ L L+ P S L L L + + + L L +
Sbjct: 52 VNNLDLSGLNLP---KPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYI 108
Query: 250 DHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLT-TIEGG 308
H + L+ + L L +YN + S S L I GNR++ I
Sbjct: 109 THTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS 168
Query: 309 AFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGL------AKIHILNLGYNRLNKLNSDT 362
+ + + NRL TF + + L + N
Sbjct: 169 YGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHL 228
Query: 363 FQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLED--TLDNLNVRDNQITTLSSSAL 420
+ + + L LDL N + GL L +LNV N +
Sbjct: 229 AKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288
Query: 421 NYKLLTKLDLSHNNL 435
N + ++N
Sbjct: 289 NLQRFDVSAYANNKC 303
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 192
Score = 43.6 bits (101), Expect = 2e-05
Identities = 43/185 (23%), Positives = 68/185 (36%), Gaps = 12/185 (6%)
Query: 426 TKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLK 485
T +D + LKE+ + L L+ N G F L L L+L L
Sbjct: 11 TTVDCTGRGLKEIPRDIPLH---TTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT 67
Query: 486 SIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPS 545
I F+ +++ L L N + EI MF L L L+L +N I + GS L S
Sbjct: 68 GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNS 127
Query: 546 MKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLA 605
+ L+L+ N + + + +LN PS ++ L
Sbjct: 128 LTSLNLASNPFNCNCHLAWFAEWLR------KKSLNGGAARCGAPSKV---RDVQIKDLP 178
Query: 606 FNKFN 610
++F
Sbjct: 179 HSEFK 183
Score = 32.1 bits (71), Expect = 0.13
Identities = 22/117 (18%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
Query: 221 RILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTS-IPSVSLNGPRALRILSMAYNRIG 279
+D + +K I I + EL ++ N L L + N++
Sbjct: 11 TTVDCTGRGLKEIPRDIPL---HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT 67
Query: 280 TLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQG 336
++ ++F ++ + L N++ I F GL ++ LNL N+++ + +F+
Sbjct: 68 GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEH 124
Score = 28.6 bits (62), Expect = 2.0
Identities = 15/89 (16%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 421 NYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLA 480
L L+L N + + P +F ++ +L LNL+ N + + F + + L+
Sbjct: 100 GLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLN-- 157
Query: 481 ATGLKSIPQYQFDELLNLKYLCLAHNHLT 509
+ ++ +++ L H+
Sbjct: 158 ---GGAARCGAPSKVRDVQIKDLPHSEFK 183
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 43.9 bits (102), Expect = 3e-05
Identities = 43/262 (16%), Positives = 83/262 (31%), Gaps = 9/262 (3%)
Query: 424 LLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATG 483
L LDL+ NL P + + + P+ +++ +DL+ +
Sbjct: 1 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSV 57
Query: 484 LK-SIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYG 542
++ S + L+ L L L++ NL L+LS + +
Sbjct: 58 IEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLL 117
Query: 543 LPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTL 602
+ +L+ + F + + ++ +LNL+ T+ + L
Sbjct: 118 SSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNL 177
Query: 603 KLAFNKFNYFPKEL----ILGLSYLQEIDLSNNQLKTIDDYDY-GYLPRLRKLNLNNNNI 657
+ K L+YLQ + LS + G +P L+ L +
Sbjct: 178 VHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVP 237
Query: 658 DAISETCFFNSSQLQIINLSFN 679
D + LQI F
Sbjct: 238 DGTLQLLKEALPHLQINCSHFT 259
Score = 43.6 bits (101), Expect = 5e-05
Identities = 45/287 (15%), Positives = 83/287 (28%), Gaps = 21/287 (7%)
Query: 167 RRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLS 226
+ LD +G L D + R + L FS ++ +DLS
Sbjct: 3 QTLDLTGKNL--HPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFS------PFRVQHMDLS 54
Query: 227 DNQIKAIE-EGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADS 285
++ I+ GIL C L L ++ R + +L L L+++ + A
Sbjct: 55 NSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQ 114
Query: 286 FLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKI 345
L L + + L+ + + + +
Sbjct: 115 TLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRC 174
Query: 346 HILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLIN---LESTGLEDTL 402
L + + + F F L+ L L+ + I L G TL
Sbjct: 175 PNLVHLDLSDSVMLKN-------DCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTL 227
Query: 403 DNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTL 449
L V I + L + L L ++ ++ + N
Sbjct: 228 KTLQVFG--IVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQ 272
Score = 37.8 bits (86), Expect = 0.004
Identities = 37/278 (13%), Positives = 82/278 (29%), Gaps = 11/278 (3%)
Query: 405 LNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLP 464
L++ + + L + + + + + F+ + H++LS + S
Sbjct: 5 LDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSP-FRVQHMDLSNSVIEVSTL 63
Query: 465 VGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYL----CLAHNHLTEIPEMMFKNLL 520
G KL+ L L L + NL L C + + + L
Sbjct: 64 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123
Query: 521 NLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNL 580
+ L + ++ + + +T + + +
Sbjct: 124 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLS 183
Query: 581 NNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILG-LSYLQEIDLSNNQLKTIDDY 639
++ L F + L+ L L+ L LG + L+ + + + D
Sbjct: 184 DSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI----VPDG 239
Query: 640 DYGYLPR-LRKLNLNNNNIDAISETCFFNSSQLQIINL 676
L L L +N ++ I+ N +I +
Sbjct: 240 TLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGI 277
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain
{Fission yeast (Schizosaccharomyces pombe) [TaxId:
4896]}
Length = 344
Score = 42.2 bits (97), Expect = 2e-04
Identities = 42/313 (13%), Positives = 90/313 (28%), Gaps = 17/313 (5%)
Query: 159 FSSSDIPIRRLDFSGNALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLV 218
FS ++ + + + L D+++E+ L+ N G S
Sbjct: 3 FSIEGKSLKLDAITTEDEKSVFAVLL--EDDSVKEIVLSGNTIGTEAARWLS-ENIASKK 59
Query: 219 NLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRI 278
+L I + SD +++ I + LL+ + + ++ + + +
Sbjct: 60 DLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSK 119
Query: 279 GTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKL--NSDTFQG 336
T +L L E L N+L S
Sbjct: 120 HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWA 179
Query: 337 GAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLEST 396
F +H + + N + + + + + + +
Sbjct: 180 KTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIAL 239
Query: 397 GLEDTLDNLNVRDNQITTLSSSALNYKL-------LTKLDLSHNNL-----KELEPTAFT 444
L L + D ++ ++A+ L L L +N + + L+
Sbjct: 240 KSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDE 299
Query: 445 NVPTLLHLNLSRN 457
+P LL L L+ N
Sbjct: 300 KMPDLLFLELNGN 312
Score = 41.4 bits (95), Expect = 3e-04
Identities = 31/313 (9%), Positives = 78/313 (24%), Gaps = 27/313 (8%)
Query: 402 LDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELE----PTAFTNVPTLLHLNLSRN 457
L + ++ + L + ++ LS N + + L S
Sbjct: 10 LKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDI 69
Query: 458 AHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFK 517
+ + L+ L L L ++ + + E ++
Sbjct: 70 -FTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYL 128
Query: 518 NLLNLTYLDLSNNNIVNLRVG---SLYGLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSS 574
+ L + + P ++ + N+L + + +
Sbjct: 129 HNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL 188
Query: 575 LEELNLNNNELT--------YLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYLQEI 626
+ N + + + + L+E+
Sbjct: 189 HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 248
Query: 627 DLSNNQLKT------IDDYDYGYLPRLRKLNLNNNNID-----AISETCFFNSSQLQIIN 675
L++ L +D + L+ L L N I+ + L +
Sbjct: 249 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLE 308
Query: 676 LSFNRLEKLPERL 688
L+ NR + + +
Sbjct: 309 LNGNRFSEEDDVV 321
Score = 41.0 bits (94), Expect = 4e-04
Identities = 23/251 (9%), Positives = 57/251 (22%), Gaps = 4/251 (1%)
Query: 1 MRRLFDSIVHLSILLVSIVQVSSEPCDTMIDDFPYPCRCKKMSESQLAMDCDNVAFPNGE 60
+R L +++ L + ++ + + + L +
Sbjct: 82 LRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKI 141
Query: 61 YPTLPYGLNLVTFSQRWVGHQILPMQIFSSSVSSEPCDTMIDDFPYPCRCKK---MSESQ 117
L I+ + + S + K +
Sbjct: 142 ARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE 201
Query: 118 LAMDCDNVAFPNGEYPTLPYGLNLVTFSQRWVGHQILPMQIFSSSDIPIRRLDFSGNALR 177
+ + + I + ++ + S
Sbjct: 202 GIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 261
Query: 178 RLSDKLFSPHRDTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGI 237
+ D LQ LRL N T + +L L+L+ N+ ++ +
Sbjct: 262 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVV 321
Query: 238 LKGCDNLLELR 248
+ + R
Sbjct: 322 DE-IREVFSTR 331
Score = 38.3 bits (87), Expect = 0.003
Identities = 42/324 (12%), Positives = 103/324 (31%), Gaps = 28/324 (8%)
Query: 219 NLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIP----SVSLNGPRALRILSMA 274
+L++ ++ K++ L D++ E+ + N + S ++ + L I +
Sbjct: 9 SLKLDAITTEDEKSVFAV-LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFS 67
Query: 275 YNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTF 334
G +K + + R L + +L+ +L T+ + + + +
Sbjct: 68 DIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLY 127
Query: 335 QGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLE 394
L+ + + ++ L+S+ N L N
Sbjct: 128 -------------LHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGS 174
Query: 395 STGLEDTLDNLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNL 454
T + + T+ + L L + ++ +L
Sbjct: 175 MKEWAKTFQSHR----LLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHL 230
Query: 455 SRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQY-QFDELLNLKYLCLAHNHLTE--- 510
+A +L L L+A G ++ E + L+ L L +N +
Sbjct: 231 GSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAV 290
Query: 511 --IPEMMFKNLLNLTYLDLSNNNI 532
+ ++ + + +L +L+L+ N
Sbjct: 291 RTLKTVIDEKMPDLLFLELNGNRF 314
Score = 29.5 bits (64), Expect = 1.4
Identities = 9/52 (17%), Positives = 18/52 (34%)
Query: 309 AFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNS 360
+ + L L YN + T + + + L L NR ++ +
Sbjct: 268 SKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 319
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 210
Score = 40.8 bits (94), Expect = 3e-04
Identities = 41/203 (20%), Positives = 72/203 (35%), Gaps = 26/203 (12%)
Query: 369 TIFSFFQD--FQKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITTLSSSALNYKLLT 426
I F D F + +L + + + +++D + ++ I ++ +T
Sbjct: 13 PIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQ-YLPNVT 71
Query: 427 KLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKS 486
KL L+ N L + N+ L L L N + LK L + + +
Sbjct: 72 KLFLNGNKLTD--IKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDING 129
Query: 487 IPQY-----------------QFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSN 529
+ L L L L N +++I L L L LS
Sbjct: 130 LVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSK 187
Query: 530 NNIVNLRVGSLYGLPSMKRLDLS 552
N+I +LR +L GL ++ L+L
Sbjct: 188 NHISDLR--ALAGLKNLDVLELF 208
Score = 40.8 bits (94), Expect = 3e-04
Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 13/171 (7%)
Query: 493 DELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGS--------LYGLP 544
+EL ++ + ++ + + + L N+T L L+ N + +++ +
Sbjct: 43 NELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDEN 100
Query: 545 SMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKL 604
+K L + + + L + L + T+ S+L L
Sbjct: 101 KVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDT 160
Query: 605 AFNKFNYFPKELIL-GLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNN 654
+ N + L GL+ LQ + LS N + + L L L L +
Sbjct: 161 LSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFS 209
Score = 39.6 bits (91), Expect = 6e-04
Identities = 34/194 (17%), Positives = 65/194 (33%), Gaps = 19/194 (9%)
Query: 493 DELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLS 552
D L +T+ L ++ + +N++I +++ + LP++ +L L+
Sbjct: 21 DAFAETIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLN 76
Query: 553 FNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYF 612
NKLT ++L+ L + + S K +
Sbjct: 77 GNKLTDI----------KPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISD 126
Query: 613 PKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISETCFFNSSQLQ 672
L+ +N D L +L L+L +N I I ++LQ
Sbjct: 127 INGLVHLPQLESLYLGNNKIT---DITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQ 181
Query: 673 IINLSFNRLEKLPE 686
+ LS N + L
Sbjct: 182 NLYLSKNHISDLRA 195
Score = 33.8 bits (76), Expect = 0.043
Identities = 30/199 (15%), Positives = 66/199 (33%), Gaps = 9/199 (4%)
Query: 189 DTLQELRLADNLFGDSLNPIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELR 248
D + DNL S+ + +E L ++ + +++ IK+++ ++ N+ +L
Sbjct: 20 DDAFAETIKDNLKKKSVTDAVTQNE---LNSIDQIIANNSDIKSVQG--IQYLPNVTKLF 74
Query: 249 MDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGG 308
++ N+ T I ++ L + + D + + +
Sbjct: 75 LNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLP 134
Query: 309 AFNGLAKIHILNLGYNRLNKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHI 368
L + L++L N ++ I L L KL + HI
Sbjct: 135 QLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPL----AGLTKLQNLYLSKNHI 190
Query: 369 TIFSFFQDFQKLKSLDLNG 387
+ + L L+L
Sbjct: 191 SDLRALAGLKNLDVLELFS 209
Score = 28.1 bits (61), Expect = 2.9
Identities = 23/201 (11%), Positives = 62/201 (30%), Gaps = 6/201 (2%)
Query: 207 PIFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRFTSIPSVSLNGPR 266
PI +L + +++ ++ +++ S+ +
Sbjct: 13 PIKQIFSDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQG--IQYLP 68
Query: 267 ALRILSMAYNRIGTLKADSFLSQRWLERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRL 326
+ L + N++ +K + L + + + + N +
Sbjct: 69 NVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDIN 128
Query: 327 NKLNSDTFQGGAFNGLAKIHILNLGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLN 386
++ + +RL KL++ + + I+ KL++L L+
Sbjct: 129 GLVHLPQLESLYLGN--NKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLS 186
Query: 387 GNFLINLESTGLEDTLDNLNV 407
N + +L + LD L +
Sbjct: 187 KNHISDLRALAGLKNLDVLEL 207
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae
(Chlamydomonas reinhardtii) [TaxId: 3055]}
Length = 198
Score = 35.4 bits (80), Expect = 0.011
Identities = 30/173 (17%), Positives = 55/173 (31%), Gaps = 8/173 (4%)
Query: 484 LKSIPQYQFDELLNLKYLCLAHNHLTEIPEM--MFKNLLNLTYLDLSNNNIVNLRVGSLY 541
++ + + + + L H + I +M L +L LS NNI + SL
Sbjct: 11 IRIFEERKSVVATEAEKVEL-HGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS--SLS 67
Query: 542 GLPSMKRLDLSFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKT 601
G+ +++ L L N + + + + + + L S K
Sbjct: 68 GMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKI 127
Query: 602 LKLAFNKFNYFPKEL---ILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLN 651
+L +L + L NN LP L+KL+
Sbjct: 128 TNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180
Score = 33.1 bits (74), Expect = 0.061
Identities = 28/147 (19%), Positives = 44/147 (29%), Gaps = 9/147 (6%)
Query: 492 FDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDL 551
L K+L L+ N++ +I + NL L L N I + D
Sbjct: 44 LSTLKACKHLALSTNNIEKISS--LSGMENLRILSLGRNLIKKIE-------NLDAVADT 94
Query: 552 SFNKLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNY 611
++ + + + NN + KL+ L LA N
Sbjct: 95 LEELWISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154
Query: 612 FPKELILGLSYLQEIDLSNNQLKTIDD 638
KE Y E+ LK +D
Sbjct: 155 DYKENNATSEYRIEVVKRLPNLKKLDG 181
Score = 33.1 bits (74), Expect = 0.067
Identities = 31/193 (16%), Positives = 60/193 (31%), Gaps = 23/193 (11%)
Query: 435 LKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDE 494
++ E + L LK + L L+ ++ I
Sbjct: 11 IRIFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS--SLSG 68
Query: 495 LLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFN 554
+ NL+ L L N + +I + N + L +++ L +S N
Sbjct: 69 MENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLSGI---EKLVNLRVLYMSNN 125
Query: 555 KLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPK 614
K+T + LE+L L N L + + N + +
Sbjct: 126 KITNWGEIDKL----AALDKLEDLLLAGNPLYNDYKEN--------------NATSEYRI 167
Query: 615 ELILGLSYLQEID 627
E++ L L+++D
Sbjct: 168 EVVKRLPNLKKLD 180
Score = 31.2 bits (69), Expect = 0.31
Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 9/82 (10%)
Query: 174 NALRRLSDKLFSPHRDTLQELRLADNLFGDSLNPIFST-SEFHGLVNLRILDLSDNQIKA 232
+A+R ++ ++ + PI + L + L LS N I+
Sbjct: 9 DAIRIFEER------KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK 62
Query: 233 IEEGILKGCDNLLELRMDHNRF 254
I L G +NL L + N
Sbjct: 63 ISS--LSGMENLRILSLGRNLI 82
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor
receptor, N-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 156
Score = 34.8 bits (78), Expect = 0.014
Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 2/93 (2%)
Query: 474 LEVLDLAATGLKSIPQYQFDELLNLKYLCLAHN-HLTEIPEMMFKNLLNLTYLDLSNNNI 532
L G NL L + + HL + + L L L + + +
Sbjct: 10 SSGLRCTRDGALDSLH-HLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL 68
Query: 533 VNLRVGSLYGLPSMKRLDLSFNKLTTFKGDYFN 565
+ + + P + RL+LSFN L +
Sbjct: 69 RFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQ 101
Score = 30.1 bits (66), Expect = 0.45
Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 4/142 (2%)
Query: 405 LNVRDNQITTLSSSALNYKLLTKLDLSHNN-LKELEPTAFTNVPTLLHLNLSRNAHLSSL 463
L + + LT+L + + L+ LE + L +L + ++
Sbjct: 13 LRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVA 72
Query: 464 PVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMM-FKNLLNL 522
P +L L+L+ L+S+ L+L+ L L+ N L + +
Sbjct: 73 PDAFHFT-PRLSRLNLSFNALESLSWKTVQ-GLSLQELVLSGNPLHCSCALRWLQRWEEE 130
Query: 523 TYLDLSNNNIVNLRVGSLYGLP 544
+ + G L +P
Sbjct: 131 GLGGVPEQKLQCHGQGPLAHMP 152
Score = 29.8 bits (65), Expect = 0.62
Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 7/101 (6%)
Query: 497 NLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNN-IVNLRVGSLYGLPSMKRLDLSFNK 555
L + + NLT L + N + +L + L GL ++ L + +
Sbjct: 9 GSSGLRCTRDGALDSLH-HLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSG 67
Query: 556 LTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIH 596
L D F+ + + NL+ N L L +
Sbjct: 68 LRFVAPDAFHFTPRLSRL-----NLSFNALESLSWKTVQGL 103
Score = 29.0 bits (63), Expect = 1.4
Identities = 16/96 (16%), Positives = 29/96 (30%)
Query: 241 CDNLLELRMDHNRFTSIPSVSLNGPRALRILSMAYNRIGTLKADSFLSQRWLERIILRGN 300
LR + + + L+ L + + +
Sbjct: 7 PHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKS 66
Query: 301 RLTTIEGGAFNGLAKIHILNLGYNRLNKLNSDTFQG 336
L + AF+ ++ LNL +N L L+ T QG
Sbjct: 67 GLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG 102
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 199
Score = 34.3 bits (77), Expect = 0.026
Identities = 25/181 (13%), Positives = 58/181 (32%), Gaps = 17/181 (9%)
Query: 493 DELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLS 552
L L ++T+ +L +T L I ++ + L ++ +++ S
Sbjct: 15 TALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSID--GVEYLNNLTQINFS 70
Query: 553 FN-----------KLTTFKGDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKT 601
N N + + + +
Sbjct: 71 NNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNL 130
Query: 602 LKLAFNKFNYFPKELILGLSYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAIS 661
+L + + GL+ LQ+++ S+NQ+ + L L +L++++N + IS
Sbjct: 131 NRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPL--ANLTTLERLDISSNKVSDIS 188
Query: 662 E 662
Sbjct: 189 V 189
Score = 33.1 bits (74), Expect = 0.082
Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 12/195 (6%)
Query: 355 LNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDTLDNLNVRDNQITT 414
L + T++T D ++ +L + + +++ + L +N +NQ+T
Sbjct: 17 LAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTD 76
Query: 415 LSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSLPVGGFDPLKKL 474
L L + + T + L +L + + L L
Sbjct: 77 ------ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNL 130
Query: 475 EVLDLAATGLKSIPQYQFDELLNLKYLCLAHNHLTEIPEMMFKNLLNLTYLDLSNNNIVN 534
L+L++ + I +L+ L + N +T++ NL L LD+S+N + +
Sbjct: 131 NRLELSSNTISDISALSGLT--SLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSD 186
Query: 535 LRVGSLYGLPSMKRL 549
+ L L +++ L
Sbjct: 187 I--SVLAKLTNLESL 199
Score = 30.4 bits (67), Expect = 0.53
Identities = 31/173 (17%), Positives = 63/173 (36%), Gaps = 24/173 (13%)
Query: 404 NLNVRDNQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHLNLSRNAHLSSL 463
+ +T S + +T L +K ++ + L +N S N
Sbjct: 22 KTVLGKTNVTDTVSQT-DLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTDIT 78
Query: 464 PVGGFDPLKKLEVLDLAATGLKSIPQYQF-----------------DELLNLKYLCLAHN 506
P+ L + + + + + L NL L L+ N
Sbjct: 79 PLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSN 138
Query: 507 HLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTF 559
+++I + +L L+ S+N + +L+ L L +++RLD+S NK++
Sbjct: 139 TISDISALSGLT--SLQQLNFSSNQVTDLK--PLANLTTLERLDISSNKVSDI 187
Score = 29.6 bits (65), Expect = 1.0
Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 208 IFSTSEFHGLVNLRILDLSDNQIKAIEEGILKGCDNLLEL 247
+ L L LD+S N++ I L NL L
Sbjct: 162 VTDLKPLANLTTLERLDISSNKVSDISV--LAKLTNLESL 199
Score = 28.9 bits (63), Expect = 1.6
Identities = 33/207 (15%), Positives = 62/207 (29%), Gaps = 22/207 (10%)
Query: 444 TNVPTLLHLNLSRNAHLSSLPVGGFDPLKKLEVLDLAATGLKSIPQYQFDELLNLKYLCL 503
T + + L + ++ L ++ L G+KSI ++ L NL +
Sbjct: 15 TALAEKMKTVLGKTNVTDTVS---QTDLDQVTTLQADRLGIKSIDGVEY--LNNLTQINF 69
Query: 504 AHNHLTEIPEMMFKNLLNLTYLDLSNNNIVNLRVGSLYGLPSMKRLDLSFNKLTTFKGDY 563
++N LT+I + N + + + + LT
Sbjct: 70 SNNQLTDITPLK--------------NLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 115
Query: 564 FNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGLSYL 623
+L LN + S + K L L+ L
Sbjct: 116 NQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPL-ANLTTL 174
Query: 624 QEIDLSNNQLKTIDDYDYGYLPRLRKL 650
+ +D+S+N++ I L L L
Sbjct: 175 ERLDISSNKVSDIS--VLAKLTNLESL 199
Score = 28.5 bits (62), Expect = 2.5
Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 7/163 (4%)
Query: 292 LERIILRGNRLTTIEGGAFNGLAKIHILNLGYNRLNKLN--SDTFQGGAFNGLAKIHILN 349
+ + + +I+G L + +N N+L + + +
Sbjct: 42 VTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI 99
Query: 350 LGYNRLNKLNSDTFQGTHITIFSFFQDFQKLKSLDLNGNFLINLESTGLEDTLDNLNVRD 409
L L T IT ++ L L+L+ N + ++ + +L LN
Sbjct: 100 TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSS 159
Query: 410 NQITTLSSSALNYKLLTKLDLSHNNLKELEPTAFTNVPTLLHL 452
NQ+T L A N L +LD+S N + ++ + L L
Sbjct: 160 NQVTDLKPLA-NLTTLERLDISSNKVSDISV--LAKLTNLESL 199
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 29.9 bits (66), Expect = 0.76
Identities = 9/36 (25%), Positives = 23/36 (63%)
Query: 219 NLRILDLSDNQIKAIEEGILKGCDNLLELRMDHNRF 254
++ I+D+++ I+ +E I + + +L +DH++F
Sbjct: 176 SITIVDVTNKGIQEVEALIWQIVEPVLSTHIDHDKF 211
>d1jb0a_ f.29.1.1 (A:) Apoprotein a1, PsaA {Synechococcus elongatus
[TaxId: 32046]}
Length = 743
Score = 27.9 bits (62), Expect = 5.4
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 9/71 (12%)
Query: 148 WVGHQILPMQIFSSSDIPIRRLDFSG--NALRRLSDKLFSPHRDTLQELRLADNLFGDSL 205
W GHQI +PI +L +G L + + D F +
Sbjct: 200 WAGHQIH-------VSLPINKLLDAGVAAKDIPLPHEFILNPSLMAELYPKVDWGFFSGV 252
Query: 206 NPIFSTSEFHG 216
P F+ +
Sbjct: 253 IPFFTFNWAAY 263
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 167
Score = 26.8 bits (58), Expect = 7.4
Identities = 14/162 (8%), Positives = 47/162 (29%), Gaps = 27/162 (16%)
Query: 510 EIPEMMFKNLLNLTYLDLSNNNIVNLR-----VGSLYGLPSMKRLDLSFNKLTTF----K 560
+ ++ +L ++++N V+ + + +++ L+ ++
Sbjct: 5 SCINRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGL 64
Query: 561 GDYFNTKSKPNTSSLEELNLNNNELTYLFPSSFTIHSKLKTLKLAFNKFNYFPKELILGL 620
+ T ++E L L L S + + K + + +
Sbjct: 65 IELIETSPSLRVLNVESNFLTPELLARLL-RSTLVTQSIVEFKADNQRQSVLGNQ---VE 120
Query: 621 SYLQEIDLSNNQLKTIDDYDYGYLPRLRKLNLNNNNIDAISE 662
+ N L ++ ++ +++A
Sbjct: 121 MDMMMAIEEN--------------ESLLRVGISFASMEARHR 148
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.138 0.406
Gapped
Lambda K H
0.267 0.0528 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,598,272
Number of extensions: 123266
Number of successful extensions: 933
Number of sequences better than 10.0: 1
Number of HSP's gapped: 432
Number of HSP's successfully gapped: 211
Length of query: 719
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 627
Effective length of database: 1,144,436
Effective search space: 717561372
Effective search space used: 717561372
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.8 bits)